Psyllid ID: psy5751

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230--
Protein Sequence
MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG
Secondary Structure (PSIPRED)
cEEEEEEEccccEEEEEEccccccEEEEEccccccEEEEEcccccccEEEEEEccccEEEEEccccEEEEEEccccccEEEEcccccccEEEEEEccccEEEEEEcccccccEEEEEccccccEEEEEcccccccEEEEEEccccEEEEEEcccccEEEEccccccEEEEEccccccEEEEEEccEEEEEEccccEEEEEEcccccccEEEEcccccccEEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEcccccEEEEEEccccEEEEEEccccccEEEEccccccEEEEEEEccccEEEEEEccccEEEEEEccccccEEEEccccccEEEEEEEccccEEEEEEccccccEEEEEEccccccEEEEEccccccEEEEEEEccccEEEEEEccccEEEEEEccEEEEEEEEEccccEEEEEEEccEEEEEEccccEEEEEEccccccEEEEEcccccccEEEEEEccccccc
Coil and Loop (DISEMBL)
mligitvdcvegQVYYssvadkssikrahldgknvedvittnirspegltfdwvNRVLYWTDSQMDTIsmanlnddqpkvivskdlvnprgivvhpyyrklfwsdwnrsgpkiewsnldgtdREIFLKAAdlklpnslavdfrtdelcwvdadskslecmtirnrvrrkvysnctypfglsitdekyywtdwkTNRIESAnkegerapsiaLDMMGTTYMYGiaavpsscpg
Flexible Loop (DISEMBL)
mligitvdcvegQVYYSsvadkssikrahldgknvedvittnirspegltfdWVNRVLYWTDSQMDTISMAnlnddqpkvivskdlvnprgIVVHPYYRKlfwsdwnrsgpkiewsnldgtDREIFLKAADLKLPNSLAVDFRTDElcwvdadskslecmtirnrvrrkvysnctypfglsitdekyywTDWKTNRIesankegerapSIALDMMGTTYMYGIAAVPSSCPG
Low Complexity Region (SEG)
MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG
Disordered region (IsUnstruct)
*LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRI************IALDMMGTTYMYGIAAV******
Disordered Region (DISOPRED)
MLIGITVDCVEGQVYYSSVADKSSIKRAHLD*KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS*C**
Disordered Region (DISEMBL)
MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG
Disordered Region (DISPRO)
MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	232	2.2.26 [Sep-21-2011]
P10493	1245	Nidogen-1 OS=Mus musculus	yes	N/A	0.969	0.180	0.401	8e-46
O88322	1403	Nidogen-2 OS=Mus musculus	no	N/A	0.982	0.162	0.409	8e-45
P14543	1247	Nidogen-1 OS=Homo sapiens	yes	N/A	0.982	0.182	0.389	1e-44
B5DFC9	1396	Nidogen-2 OS=Rattus norve	no	N/A	0.982	0.163	0.405	3e-44
Q14112	1375	Nidogen-2 OS=Homo sapiens	no	N/A	0.982	0.165	0.405	4e-44
Q9QYP1	1905	Low-density lipoprotein r	no	N/A	0.896	0.109	0.383	1e-35
Q91VN0	1614	Low-density lipoprotein r	no	N/A	0.849	0.122	0.383	4e-35
O75096	1905	Low-density lipoprotein r	no	N/A	0.896	0.109	0.379	4e-35
O75197	1615	Low-density lipoprotein r	no	N/A	0.849	0.121	0.378	5e-35
Q8VI56	1905	Low-density lipoprotein r	no	N/A	0.896	0.109	0.379	5e-35

>sp|P10493|NID1_MOUSE Nidogen-1 OS=Mus musculus GN=Nid1 PE=1 SV=2

 Score =  183 bits (465), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 94/234 (40%), Positives = 135/234 (57%), Gaps = 9/234 (3%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            ++IG+  DCV+  VY++ +++  SI RA L G     +I  ++ SPEG+  D + R ++W
Sbjct: 977  VIIGLAFDCVDKVVYWTDISE-PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFW 1035

Query: 61   TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
            TDSQ+D I +A ++  Q +V+    LVNPRGIV  P    L+W+DWNR  PKIE S++DG
Sbjct: 1036 TDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 1095

Query: 121  TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
            T+R I L   +L LPN L  D  + +LCWVDA +   EC+      RRKV     YPF +
Sbjct: 1096 TNRRI-LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAV 1154

Query: 181  SITDEKYYWTDWKTNRIESANKEGERAPSIALDMM---GTTYMYGIAAVPSSCP 231
            +   +  Y+TDWKTN + +     + A S  +D       T +YGI    S CP
Sbjct: 1155 TSYGKNLYYTDWKTNSVIAM----DLAISKEMDTFHPHKQTRLYGITIALSQCP 1204

Sulfated glycoprotein widely distributed in basement membranes and tightly associated with laminin. Also binds to collagen IV and perlecan. It probably has a role in cell-extracellular matrix interactions.
Mus musculus (taxid: 10090)

>sp|O88322|NID2_MOUSE Nidogen-2 OS=Mus musculus GN=Nid2 PE=1 SV=2

 Score =  180 bits (456), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 95/232 (40%), Positives = 133/232 (57%), Gaps = 4/232 (1%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLY 59
            +++GI  DC E  VY++ VA ++ I RA L+ G   E +IT+ + SPEGL  D   R +Y
Sbjct: 1171 IVVGIDYDCRERMVYWTDVAGRT-ISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMY 1229

Query: 60   WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            WTDS +D I  A L+  + KV+   DLVNPR I V P    L+W+DWNR  PKIE S+LD
Sbjct: 1230 WTDSGLDKIERAELDGSERKVLFHTDLVNPRAITVDPIRGNLYWTDWNREAPKIETSSLD 1289

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            G +R I +   D+ LPN L  D  +  LCW DA +K LEC       RR + ++  YPF 
Sbjct: 1290 GENRRILIN-KDIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNHLNYPFS 1348

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            +    + +Y TDW+ + + S NK+  +     L     +++YGI AV   CP
Sbjct: 1349 IVSYADHFYHTDWRRDGVISVNKDSGQFTDEFLPEQ-RSHLYGITAVYPYCP 1399

Cell adhesion glycoprotein. Might be involved in osteoblast differentiation. It probably has a role in cell-extracellular matrix interactions.

Mus musculus (taxid: 10090)

>sp|P14543|NID1_HUMAN Nidogen-1 OS=Homo sapiens GN=NID1 PE=1 SV=3

 Score =  179 bits (454), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 90/231 (38%), Positives = 129/231 (55%), Gaps = 3/231 (1%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            ++IG+  DCV+  VY++ + +  SI RA L G     +I  ++ SPEG+  D + R ++W
Sbjct: 979  VIIGLAFDCVDKMVYWTDITE-PSIGRASLHGGEPTTIIRQDLGSPEGIAVDHLGRNIFW 1037

Query: 61   TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
            TDS +D I +A L+  Q +V+   DLVNPRGIV       L+W+DWNR  PKIE S +DG
Sbjct: 1038 TDSNLDRIEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYWTDWNRDNPKIETSYMDG 1097

Query: 121  TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
            T+R I ++  DL LPN L  D  + +LCWVDA +   EC+      RRK      YPF +
Sbjct: 1098 TNRRILVQ-DDLGLPNGLTFDAFSSQLCWVDAGTNRAECLNPSQPSRRKALEGLQYPFAV 1156

Query: 181  SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            +   +  Y+TDWK N + + +    +    A      T +YGI    S CP
Sbjct: 1157 TSYGKNLYFTDWKMNSVVALDLAISKETD-AFQPHKQTRLYGITTALSQCP 1206

Sulfated glycoprotein widely distributed in basement membranes and tightly associated with laminin. Also binds to collagen IV and perlecan. It probably has a role in cell-extracellular matrix interactions.

Homo sapiens (taxid: 9606)

>sp|B5DFC9|NID2_RAT Nidogen-2 OS=Rattus norvegicus GN=Nid2 PE=2 SV=1

 Score =  178 bits (451), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 94/232 (40%), Positives = 133/232 (57%), Gaps = 4/232 (1%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLY 59
            +++GI  DC E  VY++ VA ++ I RA L+ G   E +IT+ + SPEGL  D   R +Y
Sbjct: 1164 IVVGIDYDCRERMVYWTDVAGRT-ISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMY 1222

Query: 60   WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            WTDS +D I  A L+  + KV+   DLVNPR I V P    L+W+DWNR  PKIE S+LD
Sbjct: 1223 WTDSGLDKIERAGLDGSERKVLFHTDLVNPRAITVDPIRGNLYWTDWNREAPKIETSSLD 1282

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            G +R I +   D+ LPN L  D  +  LCW DA +K LEC       RR + ++  YPF 
Sbjct: 1283 GENRRILIN-KDIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNHLNYPFS 1341

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            +    + +Y TDW+ + + S +K+  +     L     +++YGI AV   CP
Sbjct: 1342 VVSYADHFYHTDWRRDGVISVSKDSGQLTDEYLPEQ-RSHLYGITAVYPYCP 1392

Cell adhesion glycoprotein. Might be involved in osteoblast differentiation. It probably has a role in cell-extracellular matrix interactions.

Rattus norvegicus (taxid: 10116)

>sp|Q14112|NID2_HUMAN Nidogen-2 OS=Homo sapiens GN=NID2 PE=1 SV=3

 Score =  177 bits (450), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 4/232 (1%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLY 59
            +++GI  DC E  VY++ VA ++ I RA L+ G   E ++ + + SPEGL  D + R +Y
Sbjct: 1143 IIVGIDYDCRERMVYWTDVAGRT-ISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMY 1201

Query: 60   WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            WTDS +D I  A L+  + KV+   DLVNPR I V P    L+W+DWNR  PKIE S+LD
Sbjct: 1202 WTDSVLDKIESALLDGSERKVLFYTDLVNPRAIAVDPIRGNLYWTDWNREAPKIETSSLD 1261

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            G +R I +   D+ LPN L  D  +  LCW DA +K LEC       RR + +N  YPF 
Sbjct: 1262 GENRRILIN-TDIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNNLKYPFS 1320

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            +    + +Y TDW+ + + S NK   +     L     +++YGI AV   CP
Sbjct: 1321 IVSYADHFYHTDWRRDGVVSVNKHSGQFTDEYLPEQ-RSHLYGITAVYPYCP 1371

Cell adhesion glycoprotein which is widely distributed in basement membranes. Binds to collagens I and IV, to perlecan and to laminin 1. Does not bind fibulins. It probably has a role in cell-extracellular matrix interactions.

Homo sapiens (taxid: 9606)

>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus norvegicus GN=Lrp4 PE=1 SV=2

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 3/211 (1%)

Query: 2    LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWT 61
            +I +  D V+G+VYY+ V     I+RA L+G N+E VI   +++ +GL  DWV R LYWT
Sbjct: 1387 VISLDYDSVDGKVYYTDVF-LDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWT 1445

Query: 62   DSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121
            D+  +TI  + L+    KV+++  L  PR I V P    LFW+DW     KIE +NLDG+
Sbjct: 1446 DTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIA-KIERANLDGS 1504

Query: 122  DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLS 181
            +R++ +  ADL  PN L +D+ T  + WVDA    +E   +  ++R+ + S+ ++PF L+
Sbjct: 1505 ERKVLIN-ADLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFALT 1563

Query: 182  ITDEKYYWTDWKTNRIESANKEGERAPSIAL 212
              D   YWTDW+T  I+  +K   R     L
Sbjct: 1564 QQDRWIYWTDWQTKSIQRVDKYSGRNKETVL 1594

Mediates SOST-dependent inhibition of bone formation (By similarity). Functions as a specific facilitator of SOST-mediated inhibition of Wnt signaling (By similarity). Plays a key role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Directly binds AGRIN and recruits it to the MUSK signaling complex. Mediates the AGRIN-induced phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane. Alternatively, may be involved in the negative regulation of the canonical Wnt signaling pathway, being able to antagonize the LRP6-mediated activation of this pathway. More generally, has been proposed to function as a cell surface endocytic receptor binding and internalizing extracellular ligands for degradation by lysosomes.

Rattus norvegicus (taxid: 10116)

>sp|Q91VN0|LRP5_MOUSE Low-density lipoprotein receptor-related protein 5 OS=Mus musculus GN=Lrp5 PE=1 SV=3

 Score =  147 bits (372), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 4/201 (1%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           I I  D +EG VY++   +  +I+RA+LDG   + ++ T I  P+G+  DWV R LYWTD
Sbjct: 375 IAIDYDPLEGYVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTD 433

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           +  D I +  LN    K++VS+DL  PR IV+HP    ++W+DW  + PKIE +NLDG D
Sbjct: 434 TGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWGEN-PKIECANLDGRD 492

Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-CTYPFGLS 181
           R + +  + L  PN LA+D +  +L W DA +  +E + I    R+ +  +   + FG +
Sbjct: 493 RHVLVNTS-LGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGTKRKTLLEDKLPHIFGFT 551

Query: 182 ITDEKYYWTDWKTNRIESANK 202
           +  +  YWTDW+   IE  +K
Sbjct: 552 LLGDFIYWTDWQRRSIERVHK 572

Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Cell-surface coreceptor of Wnt/beta-catenin signaling, which plays a pivotal role in bone formation. The Wnt-induced Fzd/LRP6 coreceptor complex recruits DVL1 polymers to the plasma membrane which, in turn, recruits the AXIN1/GSK3B-complex to the cell surface promoting the formation of signalsomes and inhibiting AXIN1/GSK3-mediated phosphorylation and destruction of beta-catenin (By similarity). Appears be required for postnatal control of vascular regression in the eye. Required for posterior patterning of the epiblast during gastrulation.

Mus musculus (taxid: 10090)

>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens GN=LRP4 PE=1 SV=4

 Score =  147 bits (372), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 122/211 (57%), Gaps = 3/211 (1%)

Query: 2    LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWT 61
            +I +  D V+G+VYY+ V     I+RA L+G N+E VI   +++ +GL  DWV R LYWT
Sbjct: 1387 VISLDYDSVDGKVYYTDVF-LDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWT 1445

Query: 62   DSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121
            D+  +TI  + L+    KV+++  L  PR I V P    LFW+DW     KIE +NLDG+
Sbjct: 1446 DTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIA-KIERANLDGS 1504

Query: 122  DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLS 181
            +R++ +   DL  PN L +D+ T  + WVDA    +E   +  ++R+ + S+ ++PF L+
Sbjct: 1505 ERKVLIN-TDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFALT 1563

Query: 182  ITDEKYYWTDWKTNRIESANKEGERAPSIAL 212
              D   YWTDW+T  I+  +K   R     L
Sbjct: 1564 QQDRWIYWTDWQTKSIQRVDKYSGRNKETVL 1594

Mediates SOST-dependent inhibition of bone formation. Functions as a specific facilitator of SOST-mediated inhibition of Wnt signaling. Plays a key role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Directly binds AGRIN and recruits it to the MUSK signaling complex. Mediates the AGRIN-induced phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane. Alternatively, may be involved in the negative regulation of the canonical Wnt signaling pathway, being able to antagonize the LRP6-mediated activation of this pathway. More generally, has been proposed to function as a cell surface endocytic receptor binding and internalizing extracellular ligands for degradation by lysosomes.

Homo sapiens (taxid: 9606)

>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens GN=LRP5 PE=1 SV=2

 Score =  147 bits (371), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 4/201 (1%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           I I  D +EG VY++   +  +I+RA+LDG   + ++ T I  P+G+  DWV R LYWTD
Sbjct: 376 IAIDYDPLEGYVYWTD-DEVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTD 434

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           +  D I +  LN    K++VS+DL  PR I +HP    ++W+DW  + PKIE +NLDG +
Sbjct: 435 TGTDRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGEN-PKIECANLDGQE 493

Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-CTYPFGLS 181
           R + + A+ L  PN LA+D +  +L W DA +  +E + +    RR +  +   + FG +
Sbjct: 494 RRVLVNAS-LGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFT 552

Query: 182 ITDEKYYWTDWKTNRIESANK 202
           +  +  YWTDW+   IE  +K
Sbjct: 553 LLGDFIYWTDWQRRSIERVHK 573

Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Cell-surface coreceptor of Wnt/beta-catenin signaling, which plays a pivotal role in bone formation. The Wnt-induced Fzd/LRP6 coreceptor complex recruits DVL1 polymers to the plasma membrane which, in turn, recruits the AXIN1/GSK3B-complex to the cell surface promoting the formation of signalsomes and inhibiting AXIN1/GSK3-mediated phosphorylation and destruction of beta-catenin. Appears be required for postnatal control of vascular regression in the eye. Required for posterior patterning of the epiblast during gastrulation.

Homo sapiens (taxid: 9606)

>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus GN=Lrp4 PE=1 SV=3

 Score =  147 bits (371), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 3/211 (1%)

Query: 2    LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWT 61
            +I +  D V G+VYY+ V     I+RA L+G N+E VI   +++ +GL  DWV R LYWT
Sbjct: 1387 VISLDYDSVHGKVYYTDVF-LDVIRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWT 1445

Query: 62   DSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121
            D+  +TI  + L+    KV+++  L  PR I V P    LFW+DW     KIE +NLDG+
Sbjct: 1446 DTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIA-KIERANLDGS 1504

Query: 122  DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLS 181
            +R++ +   DL  PN L +D+ T  + WVDA    +E   +  ++R+ + S+ ++PF L+
Sbjct: 1505 ERKVLIN-TDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFALT 1563

Query: 182  ITDEKYYWTDWKTNRIESANKEGERAPSIAL 212
              D   YWTDW+T  I+  +K   R     L
Sbjct: 1564 QQDRWIYWTDWQTKSIQRVDKYSGRNKETVL 1594

Mediates SOST-dependent inhibition of bone formation. Functions as a specific facilitator of SOST-mediated inhibition of Wnt signaling. Plays a key role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Directly binds AGRIN and recruits it to the MUSK signaling complex. Mediates the AGRIN-induced phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane. Alternatively, may be involved in the negative regulation of the canonical Wnt signaling pathway, being able to antagonize the LRP6-mediated activation of this pathway. More generally, has been proposed to function as a cell surface endocytic receptor binding and internalizing extracellular ligands for degradation by lysosomes.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	232
242024896	1512	low density lipoprotein receptor, putati	0.982	0.150	0.519	3e-65
91080871	1320	PREDICTED: similar to nidogen [Tribolium	0.982	0.172	0.450	1e-61
157115559	1298	nidogen [Aedes aegypti] gi|108876881|gb|	0.991	0.177	0.5	1e-61
312371425	1353	hypothetical protein AND_22113 [Anophele	0.991	0.169	0.5	3e-61
383847655	1294	PREDICTED: LOW QUALITY PROTEIN: nidogen-	0.987	0.176	0.491	8e-61
158296946	1342	AGAP008193-PA [Anopheles gambiae str. PE	0.991	0.171	0.508	1e-60
195120874	1344	GI19329 [Drosophila mojavensis] gi|19391	0.991	0.171	0.469	2e-60
170036497	1307	nidogen [Culex quinquefasciatus] gi|1678	0.991	0.175	0.5	3e-60
350409208	1284	PREDICTED: nidogen-2-like [Bombus impati	0.987	0.178	0.478	1e-59
194753960	1352	GF12792 [Drosophila ananassae] gi|190620	0.991	0.170	0.491	2e-59

>gi|242024896|ref|XP_002432862.1| low density lipoprotein receptor, putative [Pediculus humanus corporis] gi|212518371|gb|EEB20124.1| low density lipoprotein receptor, putative [Pediculus humanus corporis]

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 120/231 (51%), Positives = 166/231 (71%), Gaps = 3/231 (1%)

Query: 3    IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
            IGI +DC E +VY+S +A K  I+ A   G +V+  IT  I+S EGL  DW++R +YWTD
Sbjct: 1235 IGIDIDCTENRVYWSDIAGKK-IESATYMGTDVKKFITDGIQSVEGLAIDWLSRNIYWTD 1293

Query: 63   SQMDTISMANL-NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121
            S+ DTI +A+L N++  KV++++ LVNPRGI VHP   K+FWSDWNR+ PKIEW+NLDGT
Sbjct: 1294 SKKDTIEVAHLDNNNLRKVLINEGLVNPRGIAVHPSRGKVFWSDWNRAAPKIEWANLDGT 1353

Query: 122  DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLS 181
             R +F++   ++LPNSLA+DF TDELCW DA +K++EC  I NR  R V  NC+YPFGL+
Sbjct: 1354 ARAVFVEGPSVQLPNSLAIDFATDELCWADAGTKAIECTGIVNRYSRTVTKNCSYPFGLA 1413

Query: 182  ITDEKYYWTDWKTNRIESANKEGERA-PSIALDMMGTTYMYGIAAVPSSCP 231
            I+   YYWTDW T +IE   +  +R   ++++ ++G+  +YGI AVP SCP
Sbjct: 1414 ISQNHYYWTDWTTRKIERFERSSQRLDKALSVPIVGSAKLYGIVAVPDSCP 1464

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080871|ref|XP_972325.1| PREDICTED: similar to nidogen [Tribolium castaneum] gi|270005920|gb|EFA02368.1| hypothetical protein TcasGA2_TC008043 [Tribolium castaneum]

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 104/231 (45%), Positives = 159/231 (68%), Gaps = 3/231 (1%)

Query: 3    IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
            +G+ +DC EG+VY+  ++ ++ I+ +  +G N  D I   I SPEGL  DWV+R +YWTD
Sbjct: 1046 VGLDIDCYEGRVYWGDISGRA-IRSSSYNGSNKSDFIVEGIGSPEGLAVDWVSRNIYWTD 1104

Query: 63   SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
            S  DT+ +A++   + +V+   +LVNPRGI VHP   K+FW+DW+R  PKIEW+N DG+ 
Sbjct: 1105 STKDTVEVASIETRRRRVLFDFNLVNPRGIAVHPQRGKIFWTDWDRKNPKIEWANGDGSG 1164

Query: 123  REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI 182
            R IFL+   + LPNSL +D+ T++LC+ DA +K +EC+ I +++RR + +NCTYPFG+++
Sbjct: 1165 RGIFLQGEAVSLPNSLTIDYDTEQLCYADAGTKKIECVDIDSKIRRTIATNCTYPFGITV 1224

Query: 183  TDEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGT-TYMYGIAAVPSSCP 231
            TD+  YW+DW T +IE A K    R P + + + G+   ++G+ AVP SCP
Sbjct: 1225 TDKHIYWSDWITKKIERAEKNTLTRLPPLQVPLGGSGNKLFGLVAVPQSCP 1275

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157115559|ref|XP_001658264.1| nidogen [Aedes aegypti] gi|108876881|gb|EAT41106.1| AAEL007226-PA [Aedes aegypti]

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 116/232 (50%), Positives = 154/232 (66%), Gaps = 2/232 (0%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            M IG+  DC EG++Y+S ++ K  I     DG + +  IT +I SPEG+  DW++R LYW
Sbjct: 1022 MAIGVDKDCAEGRIYFSDISAKQ-IFSCKYDGTDRKPFITKDILSPEGVAVDWISRRLYW 1080

Query: 61   TDSQMDTISMANLNDDQPK-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            TDS  DTI +A+L D   + VIVSK LVNPRGI V P+  KL+WSDWNR GPKIEW+NLD
Sbjct: 1081 TDSSKDTIEVASLEDPNLRAVIVSKYLVNPRGIAVDPHQSKLYWSDWNREGPKIEWANLD 1140

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            GT+R++ +    ++LPNS+ V   T ELC+ DA +K +EC+    +  R V SN TYPFG
Sbjct: 1141 GTERQVLVSGPQVELPNSIQVSPGTGELCYADAGTKKIECVDTYTKHVRTVASNLTYPFG 1200

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            L++TD+ +YWTDW T ++ES N  GER   I   + G   MYG+ AV   CP
Sbjct: 1201 LAVTDDHFYWTDWTTKKVESINAYGEREKGIPSPVFGNHKMYGMTAVTDKCP 1252

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312371425|gb|EFR19617.1| hypothetical protein AND_22113 [Anopheles darlingi]

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 116/232 (50%), Positives = 157/232 (67%), Gaps = 2/232 (0%)

Query: 1   MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
           M IG+  DC EG++Y+S   D   I  A  DG + +  IT +I+SPEG+  DW++R LYW
Sbjct: 321 MSIGLDRDCAEGRIYWSD-NDARQILTAKYDGSDKKPFITKDIKSPEGVAVDWISRRLYW 379

Query: 61  TDSQMDTISMANL-NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
           TDS+ DTI +A+L N +   V+VSK LVNPRGI V P+  KLFWSDWNR GPKIEWSNLD
Sbjct: 380 TDSEKDTIEVASLENPELRSVLVSKHLVNPRGIAVDPHQSKLFWSDWNREGPKIEWSNLD 439

Query: 120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
           GT+R++ + +  ++LPNS+ V   + ELC+ DA +K +EC+   ++  R + SN +YPFG
Sbjct: 440 GTERQLLVGSPQVELPNSIQVSMASGELCFADAGTKKIECIDTYSKQLRTIASNLSYPFG 499

Query: 180 LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
           L++TD+ +YWTDW T +IES N  G R  SI L +     MYG+ AV   CP
Sbjct: 500 LAVTDDLFYWTDWITKKIESINVYGVRQKSIHLPLFANHRMYGMTAVTDKCP 551

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847655|ref|XP_003699468.1| PREDICTED: LOW QUALITY PROTEIN: nidogen-2-like [Megachile rotundata]

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 114/232 (49%), Positives = 155/232 (66%), Gaps = 3/232 (1%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            M I I +DC  G+ Y S +     I+ A+    ++ D     + SPEGL  DWV+R ++W
Sbjct: 1022 MAIAIDIDCTNGKAYSSDITGNRIIELAY--NGSMADTFLRKVSSPEGLAVDWVSRNIFW 1079

Query: 61   TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
            TDS   T+ +ANL   + KV+VS  LVNPRGI VHPY  K+FWSDWNR+ PK+EW+N DG
Sbjct: 1080 TDSSKTTVEVANLETKKRKVLVSDGLVNPRGIAVHPYRGKIFWSDWNRASPKLEWANEDG 1139

Query: 121  TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
            + R IFL+   +KLPNSL++D+ TDELCW DA + ++ CM I +R    V +  TYPFGL
Sbjct: 1140 SGRAIFLQGDFVKLPNSLSIDWATDELCWADAGTFTISCMEIDSREINVVTNELTYPFGL 1199

Query: 181  SITDEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            +I+ + YYWTDWKT++IE A K  G+R P+I++   G+  +YGI  VP SCP
Sbjct: 1200 AISHQNYYWTDWKTHKIEVAMKSSGDRKPAISVPPGGSGKLYGIVVVPESCP 1251

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158296946|ref|XP_317275.4| AGAP008193-PA [Anopheles gambiae str. PEST] gi|157014957|gb|EAA12454.4| AGAP008193-PA [Anopheles gambiae str. PEST]

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 118/232 (50%), Positives = 155/232 (66%), Gaps = 2/232 (0%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            M IG+  DC EG++Y+S +A +  I  A  DG + +  IT +I SPEG+  DW++R LYW
Sbjct: 1067 MSIGLDRDCAEGRIYWSDIAAQQ-IVSAKYDGTDQKPFITKDIVSPEGVAVDWISRRLYW 1125

Query: 61   TDSQMDTISMANL-NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            TDS  DTI +A+L N +Q  V++SK LVNPRGI V P+  KL+WSDWNR GPKIEWSNLD
Sbjct: 1126 TDSAKDTIEVASLDNPEQRTVLISKFLVNPRGIAVDPHQTKLYWSDWNRDGPKIEWSNLD 1185

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            GT+RE  + +  + LPNS+ V   T ELC+ DA +K +EC+   +R  R + SN TYPFG
Sbjct: 1186 GTEREQLVGSPQVALPNSIQVSMATGELCYADAGTKKVECIDTYSRQIRTIASNLTYPFG 1245

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            L++TD+ +YWTDW T +IES N  G R   I   + G   MYG+ AV   CP
Sbjct: 1246 LAVTDDLFYWTDWMTKKIESINLYGVRQKPINSPVFGNHKMYGMTAVTDKCP 1297

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195120874|ref|XP_002004946.1| GI19329 [Drosophila mojavensis] gi|193910014|gb|EDW08881.1| GI19329 [Drosophila mojavensis]

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 109/232 (46%), Positives = 157/232 (67%), Gaps = 2/232 (0%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            M IG+  DCVEG++Y+  ++ +  I   + DG +    I+T+I SPEG+  D ++R LYW
Sbjct: 1061 MAIGLDKDCVEGRIYWGDISARKIISSKY-DGTDERVFISTDIESPEGIAIDVISRRLYW 1119

Query: 61   TDSQMDTISMANLNDDQPK-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            TDS+ DTI +A+L+D   + VI++KDLVNPRGI V PY  KL+WSDW+RS PKIE+S+LD
Sbjct: 1120 TDSEKDTIEVASLDDPTLRAVIINKDLVNPRGIAVDPYREKLYWSDWDRSNPKIEYSDLD 1179

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            GT RE+ L A D+KLPNSL V   + ELC+ DA ++ +EC+  ++R  R +    +YPFG
Sbjct: 1180 GTGRELLLGANDVKLPNSLVVVEHSGELCYADAGTRKVECINAQSRQTRTISQELSYPFG 1239

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            L+ T +++YWTDW T ++ES +  G R   I     G+  +YG+ AV  +CP
Sbjct: 1240 LTFTHDQFYWTDWTTKKLESVDSSGVRQKPIQTSFFGSHKLYGMTAVEQNCP 1291

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170036497|ref|XP_001846100.1| nidogen [Culex quinquefasciatus] gi|167879168|gb|EDS42551.1| nidogen [Culex quinquefasciatus]

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 116/232 (50%), Positives = 155/232 (66%), Gaps = 2/232 (0%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            M IG+  DC  G++++S ++ K  I     DG + +  IT +I SPEG+  DW++R LYW
Sbjct: 1031 MAIGVDKDCATGRIFWSDISAKQ-IFSCKYDGTDRKPFITKDIVSPEGVAVDWISRRLYW 1089

Query: 61   TDSQMDTISMANLND-DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            TDS  DTI +A+L+D D   +IVSK LVNPRGI V P+  KL+WSDWNR  PKIEWSNLD
Sbjct: 1090 TDSAKDTIEVASLDDPDLRTIIVSKYLVNPRGIAVDPHQSKLYWSDWNRESPKIEWSNLD 1149

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            GT+RE+ +    ++LPNS+ V   T ELC+ DA +K +EC+   ++  R V SN TYPFG
Sbjct: 1150 GTEREVLVSGPQVELPNSIQVAPGTGELCYADAGTKKIECVDTYSKRIRTVASNLTYPFG 1209

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            L+ITD+ +YWTDW T ++ES N  GER   I   + G+  MYG+ AV   CP
Sbjct: 1210 LAITDDHFYWTDWTTKKVESINTYGERQKGIPSPVFGSHKMYGMTAVTDKCP 1261

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409208|ref|XP_003488653.1| PREDICTED: nidogen-2-like [Bombus impatiens]

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/232 (47%), Positives = 154/232 (66%), Gaps = 3/232 (1%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            M I I +DC+ G+ Y S +     I+  +    ++ +     + SPEGL  DW++R ++W
Sbjct: 1012 MAIAIDIDCMNGKAYSSDITGNRIIELTY--NGSMAETFLPKVSSPEGLAVDWISRNIFW 1069

Query: 61   TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
            TDS   T+ +ANL   + KV+VS  LVNPRGI VHPY  K+FWSDWNR+ PK+EW+N DG
Sbjct: 1070 TDSGKTTVEVANLETKKRKVLVSDGLVNPRGIAVHPYRGKIFWSDWNRASPKLEWANEDG 1129

Query: 121  TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
            T R IFL+   +KLPNSL++D+  DELCW DA + ++ CM I +R    + +  TYPFGL
Sbjct: 1130 TGRAIFLQGDYVKLPNSLSIDWAMDELCWADAGTFTISCMEIDSRNINVIANELTYPFGL 1189

Query: 181  SITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSCP 231
            +I+ +KYYWTDWKT++IE A K  G+R P I++   G+  +YGI  VP SCP
Sbjct: 1190 AISQQKYYWTDWKTHKIEVAMKSTGDRKPPISVPPGGSGKLYGIVVVPESCP 1241

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194753960|ref|XP_001959273.1| GF12792 [Drosophila ananassae] gi|190620571|gb|EDV36095.1| GF12792 [Drosophila ananassae]

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 114/232 (49%), Positives = 151/232 (65%), Gaps = 2/232 (0%)

Query: 1    MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
            M IG+  DCVEG+VY+  +  K  I  A  +G +V   I T+I SPEG+  D V+R LYW
Sbjct: 1073 MAIGLDKDCVEGRVYWGEITTKK-IVSAKYNGSDVRPFIATDIESPEGIAIDVVSRRLYW 1131

Query: 61   TDSQMDTISMANLNDDQPK-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
            TDS  DTI +A+L+D   + VI++K LVNPRGI V PY  KLFWSDW+RS PKIE SNLD
Sbjct: 1132 TDSVKDTIEVASLDDPSLRAVIINKALVNPRGIAVDPYREKLFWSDWDRSAPKIEMSNLD 1191

Query: 120  GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
            GT RE+ L    + LPNSL V   T ELC+ DA +K +EC+  +N   R + +  +YPFG
Sbjct: 1192 GTGRELLLGHDSVTLPNSLVVLENTGELCYADAGTKKVECIQPQNGQTRTISNELSYPFG 1251

Query: 180  LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            L+ T +++YWTDW T ++ES +  G R  +I     G+  MYG+ AV  +CP
Sbjct: 1252 LTFTHDQFYWTDWSTKKLESVDSLGTRQKAIQTPSFGSHKMYGMTAVEQNCP 1303

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	232
FB|FBgn0026403	1370	Ndg "Nidogen/entactin" [Drosop	0.991	0.167	0.461	2.5e-54
UNIPROTKB|F1NC71	474	NID1 "Uncharacterized protein"	0.974	0.476	0.4	5e-44
UNIPROTKB|H0YJV3	644	NID2 "Nidogen-2" [Homo sapiens	0.982	0.354	0.405	5.7e-43
UNIPROTKB|F1NP23	1239	NID1 "Uncharacterized protein"	0.974	0.182	0.4	9.1e-43
UNIPROTKB|F1MWN3	1236	F1MWN3 "Uncharacterized protei	0.982	0.184	0.393	1.9e-42
WB|WBGene00003738	1584	nid-1 [Caenorhabditis elegans	0.982	0.143	0.402	3e-42
MGI|MGI:1298229	1403	Nid2 "nidogen 2" [Mus musculus	0.982	0.162	0.409	8.3e-42
UNIPROTKB|F1PXK3	1244	NID1 "Uncharacterized protein"	0.982	0.183	0.380	1.1e-41
MGI|MGI:97342	1245	Nid1 "nidogen 1" [Mus musculus	0.969	0.180	0.401	1.1e-41
UNIPROTKB|Q14112	1375	NID2 "Nidogen-2" [Homo sapiens	0.982	0.165	0.405	1.3e-41

FB|FBgn0026403 Ndg "Nidogen/entactin" [Drosophila melanogaster (taxid:7227)]

 Score = 573 (206.8 bits), Expect = 2.5e-54, P = 2.5e-54
 Identities = 107/232 (46%), Positives = 149/232 (64%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             M IG+  DCVEG+VY+  ++ K  +   + DG ++   ITT+I SPEG+  D ++R LYW
Sbjct:  1093 MAIGLDKDCVEGRVYWGDISTKKIVSTKY-DGTDLRPFITTDIESPEGIAIDVISRRLYW 1151

Query:    61 TDSQMDTISMANLNDDQPK-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
              DS  DTI +A+L+D   + VI++K LVNPRGI V PY  KLFWSDW+R  PKIE SNLD
Sbjct:  1152 ADSAKDTIEVASLDDPSLRAVIINKQLVNPRGIAVDPYREKLFWSDWDRESPKIEMSNLD 1211

Query:   120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
             GT RE+ L   D+ LPNSL V   + E+C+ DA +K +EC+  +NR  R + +  +YPFG
Sbjct:  1212 GTGRELLLGKDDVTLPNSLVVLENSGEVCYADAGTKKVECIEPQNRQIRTISNELSYPFG 1271

Query:   180 LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
             ++ T +++YWTDW T ++E  +  G R   I     G+  MYG+  V   CP
Sbjct:  1272 ITFTHDQFYWTDWTTKKVEIVDSLGARQTPIQPPFFGSHKMYGMTVVEQHCP 1323

GO:0005604 "basement membrane" evidence=ISS

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1NC71 NID1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 94/235 (40%), Positives = 137/235 (58%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             ++IG+  DC++  VY++ ++  S I RA L G     +I T++ SPEG+  D + R ++W
Sbjct:   206 VIIGVAYDCMDKMVYWTDISGPS-ISRASLHGGEPTTIIRTDLGSPEGIALDHLGRNIFW 264

Query:    61 TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
             TDSQ+D I +A L+  Q +++    LVNPR IVV P    L+W+DWNR  PKIE S +DG
Sbjct:   265 TDSQLDRIEVARLDGRQRRILFDTGLVNPRAIVVDPVRGNLYWTDWNREAPKIETSYMDG 324

Query:   121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
             T+R I +K  DL LPN L  D  +  LCWVDA +K LECM      RRK+     YPFG+
Sbjct:   325 TNRRILVKD-DLGLPNGLTFDPYSSMLCWVDAGTKRLECMNPNQLGRRKIVEGIQYPFGV 383

Query:   181 SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGT---TYMYGIAAVPSSCPG 232
             +   +  Y+TDW+ + + +     +R  S+  D       + +YGI    + CPG
Sbjct:   384 TSYGKNLYYTDWRRDAVVAV----DRMISVENDNFQPHKRSRLYGITTAFAQCPG 434

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0005605 "basal lamina" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0043237 "laminin-1 binding" evidence=IEA

GO:0071944 "cell periphery" evidence=IEA

UNIPROTKB|H0YJV3 NID2 "Nidogen-2" [Homo sapiens (taxid:9606)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 94/232 (40%), Positives = 132/232 (56%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLY 59
             +++GI  DC E  VY++ VA ++ I RA L+ G   E ++ + + SPEGL  D + R +Y
Sbjct:   412 IIVGIDYDCRERMVYWTDVAGRT-ISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMY 470

Query:    60 WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
             WTDS +D I  A L+  + KV+   DLVNPR I V P    L+W+DWNR  PKIE S+LD
Sbjct:   471 WTDSVLDKIESALLDGSERKVLFYTDLVNPRAIAVDPIRGNLYWTDWNREAPKIETSSLD 530

Query:   120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
             G +R I +   D+ LPN L  D  +  LCW DA +K LEC       RR + +N  YPF 
Sbjct:   531 GENRRILINT-DIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNNLKYPFS 589

Query:   180 LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
             +    + +Y TDW+ + + S NK   +     L     +++YGI AV   CP
Sbjct:   590 IVSYADHFYHTDWRRDGVVSVNKHSGQFTDEYLPEQ-RSHLYGITAVYPYCP 640

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NP23 NID1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 464 (168.4 bits), Expect = 9.1e-43, P = 9.1e-43
 Identities = 94/235 (40%), Positives = 137/235 (58%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             ++IG+  DC++  VY++ ++  S I RA L G     +I T++ SPEG+  D + R ++W
Sbjct:   971 VIIGVAYDCMDKMVYWTDISGPS-ISRASLHGGEPTTIIRTDLGSPEGIALDHLGRNIFW 1029

Query:    61 TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
             TDSQ+D I +A L+  Q +++    LVNPR IVV P    L+W+DWNR  PKIE S +DG
Sbjct:  1030 TDSQLDRIEVARLDGRQRRILFDTGLVNPRAIVVDPVRGNLYWTDWNREAPKIETSYMDG 1089

Query:   121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
             T+R I +K  DL LPN L  D  +  LCWVDA +K LECM      RRK+     YPFG+
Sbjct:  1090 TNRRILVKD-DLGLPNGLTFDPYSSMLCWVDAGTKRLECMNPNQLGRRKIVEGIQYPFGV 1148

Query:   181 SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGT---TYMYGIAAVPSSCPG 232
             +   +  Y+TDW+ + + +     +R  S+  D       + +YGI    + CPG
Sbjct:  1149 TSYGKNLYYTDWRRDAVVAV----DRMISVENDNFQPHKRSRLYGITTAFAQCPG 1199

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0005605 "basal lamina" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0043237 "laminin-1 binding" evidence=IEA

GO:0071944 "cell periphery" evidence=IEA

UNIPROTKB|F1MWN3 F1MWN3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 461 (167.3 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 91/231 (39%), Positives = 134/231 (58%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             ++IG+  DCV+  VY++ ++ + SI RA L G     ++  ++ SPEG+  D + R ++W
Sbjct:   968 VIIGLAFDCVDKMVYWTDIS-QPSIGRASLHGGEPATIVRQDLGSPEGIALDHLGRNIFW 1026

Query:    61 TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
             TDSQ+D I +A L+  Q +V+   DLVNPRGIV       L+W+DWNR  PKIE S +DG
Sbjct:  1027 TDSQLDRIEVAKLDGTQRRVLFETDLVNPRGIVTDSVRGNLYWTDWNRDNPKIETSYMDG 1086

Query:   121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
             T+R I ++  DL LPN L  D  + +LCWVDA +   EC+      RRKV     YPF +
Sbjct:  1087 TNRRILVQD-DLGLPNGLTFDAYSSQLCWVDAGAHRAECLKPGQSSRRKVLEGLQYPFAV 1145

Query:   181 SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
             +   +  Y+TDWKTN + + +    +    +      T +YGI +  S CP
Sbjct:  1146 TSFGKNLYYTDWKTNSVVAVDLAVSKETD-SFHPHKQTRLYGITSALSQCP 1195

GO:0071944 "cell periphery" evidence=IEA

GO:0043237 "laminin-1 binding" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005605 "basal lamina" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

WB|WBGene00003738 nid-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 461 (167.3 bits), Expect = 3.0e-42, P = 3.0e-42
 Identities = 93/231 (40%), Positives = 136/231 (58%)

Query:     3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
             +GI  DC E ++ +S ++  S I+ + L+G   +      + SPEG+  DW +R +Y+ D
Sbjct:  1320 VGIDFDCKEEKIVWSDMSGHS-IRTSSLNGTEHKSYFNKELSSPEGIAVDWSSRNVYYAD 1378

Query:    63 SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
             S  D I +A+LN    K +V++ LVNPR +V+  Y R L++SDW+R  P I   ++DG +
Sbjct:  1379 SMNDEIGVASLNGKFKKSLVTEGLVNPRSVVLDLYGRHLYYSDWHRENPYIGRVDMDGKN 1438

Query:   123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI 182
               +FL   D+ LPN L +     ELCWVDA +  L C+      RR V+S+  YPFGL+ 
Sbjct:  1439 NRVFLNE-DVHLPNGLTILPNRRELCWVDAGNHRLSCIQYNGAGRRTVFSSLQYPFGLTH 1497

Query:   183 TDE-KYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG 232
              +E K+YWTDWK NRI S    GE   S  + + G+  ++GI AVP SC G
Sbjct:  1498 DEEQKFYWTDWKDNRIHSVGVYGEGYRSFQISLGGSGKVFGILAVPKSCVG 1548

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0045178 "basal part of cell" evidence=IDA

GO:0005604 "basement membrane" evidence=IDA

GO:0005201 "extracellular matrix structural constituent" evidence=IDA

GO:0001764 "neuron migration" evidence=IMP

GO:0050808 "synapse organization" evidence=IMP

GO:0035418 "protein localization to synapse" evidence=IMP

GO:0007271 "synaptic transmission, cholinergic" evidence=IMP

MGI|MGI:1298229 Nid2 "nidogen 2" [Mus musculus (taxid:10090)]

 Score = 456 (165.6 bits), Expect = 8.3e-42, P = 8.3e-42
 Identities = 95/232 (40%), Positives = 133/232 (57%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLY 59
             +++GI  DC E  VY++ VA ++ I RA L+ G   E +IT+ + SPEGL  D   R +Y
Sbjct:  1171 IVVGIDYDCRERMVYWTDVAGRT-ISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMY 1229

Query:    60 WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
             WTDS +D I  A L+  + KV+   DLVNPR I V P    L+W+DWNR  PKIE S+LD
Sbjct:  1230 WTDSGLDKIERAELDGSERKVLFHTDLVNPRAITVDPIRGNLYWTDWNREAPKIETSSLD 1289

Query:   120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
             G +R I +   D+ LPN L  D  +  LCW DA +K LEC       RR + ++  YPF 
Sbjct:  1290 GENRRILINK-DIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNHLNYPFS 1348

Query:   180 LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
             +    + +Y TDW+ + + S NK+  +     L     +++YGI AV   CP
Sbjct:  1349 IVSYADHFYHTDWRRDGVISVNKDSGQFTDEFLPEQ-RSHLYGITAVYPYCP 1399

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IDA

GO:0005604 "basement membrane" evidence=IDA;IPI

GO:0007155 "cell adhesion" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IDA;IPI

GO:0009986 "cell surface" evidence=ISO

UNIPROTKB|F1PXK3 NID1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 454 (164.9 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 88/231 (38%), Positives = 133/231 (57%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             ++IG+  DCV+  VY++ +++ S I RA + G     +I  ++ SPEG+  D + R ++W
Sbjct:   976 VIIGLAFDCVDKMVYWTDISEPS-IGRASMHGGEPTTIIRQDLGSPEGIALDHLGRNIFW 1034

Query:    61 TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
             TDS +D I +A L+  Q +V+   DLVNPRGI+       L+W+DWNR  PKIE S +DG
Sbjct:  1035 TDSHLDRIEVAKLDGTQRRVLFETDLVNPRGIITDSVRGNLYWTDWNRDSPKIETSYMDG 1094

Query:   121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
             T+R I ++  DL LPN L  D  + +LCWVDA +  +EC+      RR+V     YPF +
Sbjct:  1095 TNRRILVQD-DLGLPNGLTFDAYSSQLCWVDAGTNRVECLKPDESGRRRVLEGLQYPFAV 1153

Query:   181 SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
             +   +  Y+TDWKTN + + +    +    A      T +YG+    S CP
Sbjct:  1154 TSYGKNLYYTDWKTNSVVAVDLAISKETD-AFHPHKQTRLYGVTTALSQCP 1203

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:97342 Nid1 "nidogen 1" [Mus musculus (taxid:10090)]

 Score = 454 (164.9 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 94/234 (40%), Positives = 135/234 (57%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             ++IG+  DCV+  VY++ +++ S I RA L G     +I  ++ SPEG+  D + R ++W
Sbjct:   977 VIIGLAFDCVDKVVYWTDISEPS-IGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFW 1035

Query:    61 TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
             TDSQ+D I +A ++  Q +V+    LVNPRGIV  P    L+W+DWNR  PKIE S++DG
Sbjct:  1036 TDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 1095

Query:   121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
             T+R I L   +L LPN L  D  + +LCWVDA +   EC+      RRKV     YPF +
Sbjct:  1096 TNRRI-LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAV 1154

Query:   181 SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGT---TYMYGIAAVPSSCP 231
             +   +  Y+TDWKTN + +     + A S  +D       T +YGI    S CP
Sbjct:  1155 TSYGKNLYYTDWKTNSVIAM----DLAISKEMDTFHPHKQTRLYGITIALSQCP 1204

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005518 "collagen binding" evidence=IDA

GO:0005576 "extracellular region" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IDA

GO:0005604 "basement membrane" evidence=IDA;TAS;IPI

GO:0005605 "basal lamina" evidence=IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IDA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IDA

GO:0030198 "extracellular matrix organization" evidence=IDA

GO:0032836 "glomerular basement membrane development" evidence=IMP

GO:0043237 "laminin-1 binding" evidence=IDA

GO:0050840 "extracellular matrix binding" evidence=IDA

GO:0071944 "cell periphery" evidence=IDA

UNIPROTKB|Q14112 NID2 "Nidogen-2" [Homo sapiens (taxid:9606)]

 Score = 454 (164.9 bits), Expect = 1.3e-41, P = 1.3e-41
 Identities = 94/232 (40%), Positives = 132/232 (56%)

Query:     1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLY 59
             +++GI  DC E  VY++ VA ++ I RA L+ G   E ++ + + SPEGL  D + R +Y
Sbjct:  1143 IIVGIDYDCRERMVYWTDVAGRT-ISRAGLELGAEPETIVNSGLISPEGLAIDHIRRTMY 1201

Query:    60 WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD 119
             WTDS +D I  A L+  + KV+   DLVNPR I V P    L+W+DWNR  PKIE S+LD
Sbjct:  1202 WTDSVLDKIESALLDGSERKVLFYTDLVNPRAIAVDPIRGNLYWTDWNREAPKIETSSLD 1261

Query:   120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFG 179
             G +R I +   D+ LPN L  D  +  LCW DA +K LEC       RR + +N  YPF 
Sbjct:  1262 GENRRILINT-DIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNNLKYPFS 1320

Query:   180 LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
             +    + +Y TDW+ + + S NK   +     L     +++YGI AV   CP
Sbjct:  1321 IVSYADHFYHTDWRRDGVVSVNKHSGQFTDEYLPEQ-RSHLYGITAVYPYCP 1371

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007160 "cell-matrix adhesion" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0005604 "basement membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005518 "collagen binding" evidence=TAS

GO:0007155 "cell adhesion" evidence=TAS

GO:0031012 "extracellular matrix" evidence=ISS;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	232
smart00135	43	smart00135, LY, Low-density lipoprotein-receptor Y	2e-09
smart00135	43	smart00135, LY, Low-density lipoprotein-receptor Y	4e-08
pfam00058	42	pfam00058, Ldl_recept_b, Low-density lipoprotein r	4e-06
pfam00058	42	pfam00058, Ldl_recept_b, Low-density lipoprotein r	0.002
smart00135	43	smart00135, LY, Low-density lipoprotein-receptor Y	0.003

>gnl|CDD|214531 smart00135, LY, Low-density lipoprotein-receptor YWTD domain

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 79  KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123
           + ++S  L +P G+ V     +L+W+DW      IE +NLDGT+R
Sbjct: 1   RTLLSSGLGHPNGLAVDWIEGRLYWTDWGL--DVIEVANLDGTNR 43

Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin. Length = 43

>gnl|CDD|214531 smart00135, LY, Low-density lipoprotein-receptor YWTD domain

 Score = 47.6 bits (114), Expect = 4e-08
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 38 VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN 74
          ++++ +  P GL  DW+   LYWTD  +D I +ANL+
Sbjct: 3  LLSSGLGHPNGLAVDWIEGRLYWTDWGLDVIEVANLD 39

Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin. Length = 43

>gnl|CDD|215683 pfam00058, Ldl_recept_b, Low-density lipoprotein receptor repeat class B

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 58 LYWTD-SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHP 96
          LYWTD S   +IS+A+LN    + + S+DL  P GI V P
Sbjct: 3  LYWTDSSLRASISVADLNGSDRRTLFSEDLQWPNGIAVDP 42

This domain is also known as the YWTD motif after the most conserved region of the repeat. The YWTD repeat is found in multiple tandem repeats and has been predicted to form a beta-propeller structure. Length = 42

>gnl|CDD|215683 pfam00058, Ldl_recept_b, Low-density lipoprotein receptor repeat class B

 Score = 34.5 bits (80), Expect = 0.002
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 99  RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVD 141
            +L+W+D +     I  ++L+G+DR       DL+ PN +AVD
Sbjct: 1   GRLYWTDSS-LRASISVADLNGSDRRTLFS-EDLQWPNGIAVD 41

This domain is also known as the YWTD motif after the most conserved region of the repeat. The YWTD repeat is found in multiple tandem repeats and has been predicted to form a beta-propeller structure. Length = 42

>gnl|CDD|214531 smart00135, LY, Low-density lipoprotein-receptor YWTD domain

 Score = 34.1 bits (79), Expect = 0.003
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 131 DLKLPNSLAVDFRTDELCWVDADSKSLECMTI 162
            L  PN LAVD+    L W D     +E   +
Sbjct: 7   GLGHPNGLAVDWIEGRLYWTDWGLDVIEVANL 38

Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin. Length = 43

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	232
KOG1214|consensus	1289		100.0
KOG1214|consensus	1289		99.96
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.95
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.92
KOG1215|consensus	877		99.92
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.89
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	99.86
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.82
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.68
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.64
PRK11028	330	6-phosphogluconolactonase; Provisional	99.64
KOG1215|consensus	877		99.63
COG3391	381	Uncharacterized conserved protein [Function unknow	99.61
PRK11028	330	6-phosphogluconolactonase; Provisional	99.6
KOG4659|consensus	1899		99.59
COG3391	381	Uncharacterized conserved protein [Function unknow	99.52
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	99.51
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	99.51
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	99.48
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	99.44
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	99.44
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.42
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	99.37
KOG4499|consensus	310		99.35
KOG1520|consensus	376		99.35
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	99.32
KOG1520|consensus	376		99.28
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.27
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.26
KOG4659|consensus	1899		99.24
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.19
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	99.17
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.15
PRK04792	448	tolB translocation protein TolB; Provisional	99.14
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	99.08
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	99.05
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	99.04
PRK05137	435	tolB translocation protein TolB; Provisional	99.02
PRK04922	433	tolB translocation protein TolB; Provisional	99.0
PRK02889	427	tolB translocation protein TolB; Provisional	98.98
PRK00178	430	tolB translocation protein TolB; Provisional	98.97
PRK04043	419	tolB translocation protein TolB; Provisional	98.96
PRK03629	429	tolB translocation protein TolB; Provisional	98.95
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	98.94
PF00058	42	Ldl_recept_b: Low-density lipoprotein receptor rep	98.93
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	98.93
PF00058	42	Ldl_recept_b: Low-density lipoprotein receptor rep	98.93
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	98.92
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.91
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.89
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	98.83
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.83
PRK01029	428	tolB translocation protein TolB; Provisional	98.8
PRK05137	435	tolB translocation protein TolB; Provisional	98.79
PRK04792	448	tolB translocation protein TolB; Provisional	98.78
PRK02889	427	tolB translocation protein TolB; Provisional	98.76
PRK04043	419	tolB translocation protein TolB; Provisional	98.76
PRK03629	429	tolB translocation protein TolB; Provisional	98.69
PRK04922	433	tolB translocation protein TolB; Provisional	98.68
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.66
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	98.65
PRK01742	429	tolB translocation protein TolB; Provisional	98.64
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	98.64
smart00135	43	LY Low-density lipoprotein-receptor YWTD domain. T	98.62
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	98.62
PRK00178	430	tolB translocation protein TolB; Provisional	98.62
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.6
smart00135	43	LY Low-density lipoprotein-receptor YWTD domain. T	98.55
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	98.53
PRK01742	429	tolB translocation protein TolB; Provisional	98.38
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	98.38
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.37
COG2133	399	Glucose/sorbosone dehydrogenases [Carbohydrate tra	98.34
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	98.32
KOG0279|consensus	315		98.3
PRK02888	635	nitrous-oxide reductase; Validated	98.28
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	98.21
PRK01029	428	tolB translocation protein TolB; Provisional	98.21
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	98.21
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.19
COG2133	399	Glucose/sorbosone dehydrogenases [Carbohydrate tra	98.18
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	98.03
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	97.96
KOG4499|consensus	310		97.84
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	97.75
PRK02888	635	nitrous-oxide reductase; Validated	97.73
KOG0291|consensus	893		97.62
COG5276	370	Uncharacterized conserved protein [Function unknow	97.61
KOG0291|consensus	893		97.54
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.46
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.39
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.38
PF05787	524	DUF839: Bacterial protein of unknown function (DUF	97.36
PF05787	524	DUF839: Bacterial protein of unknown function (DUF	97.29
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.24
KOG1446|consensus	311		97.17
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.16
KOG0289|consensus	506		97.12
PTZ00421	493	coronin; Provisional	97.06
COG4946	668	Uncharacterized protein related to the periplasmic	97.05
KOG0315|consensus	311		96.99
PF01731	86	Arylesterase: Arylesterase; InterPro: IPR002640 Th	96.86
KOG0285|consensus	460		96.8
PLN00181	793	protein SPA1-RELATED; Provisional	96.8
PF13449	326	Phytase-like: Esterase-like activity of phytase	96.8
PF13449	326	Phytase-like: Esterase-like activity of phytase	96.76
KOG0285|consensus	460		96.66
KOG4378|consensus	673		96.58
KOG0272|consensus	459		96.56
KOG4378|consensus	673		96.54
COG5276	370	Uncharacterized conserved protein [Function unknow	96.49
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	96.4
KOG0310|consensus	487		96.29
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	96.27
KOG1446|consensus	311		96.24
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	96.19
PLN00181	793	protein SPA1-RELATED; Provisional	96.12
PTZ00421	493	coronin; Provisional	96.06
KOG0318|consensus	603		96.0
PF01731	86	Arylesterase: Arylesterase; InterPro: IPR002640 Th	95.91
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	95.86
KOG0266|consensus	456		95.85
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	95.76
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	95.74
KOG0315|consensus	311		95.73
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	95.67
KOG4649|consensus	354		95.67
KOG4441|consensus	571		95.64
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	95.53
COG4946	668	Uncharacterized protein related to the periplasmic	95.48
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	95.44
KOG0279|consensus	315		95.43
KOG0266|consensus	456		95.4
KOG4328|consensus	498		95.38
KOG0318|consensus	603		95.33
KOG4441|consensus	571		95.08
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.06
KOG0292|consensus	1202		95.04
KOG0310|consensus	487		95.03
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	94.99
KOG0281|consensus	499		94.95
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	94.88
KOG1539|consensus	910		94.88
PTZ00420	568	coronin; Provisional	94.83
KOG0268|consensus	433		94.77
PTZ00420	568	coronin; Provisional	94.74
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	94.58
PRK13616	591	lipoprotein LpqB; Provisional	94.48
PF02191	250	OLF: Olfactomedin-like domain; InterPro: IPR003112	94.45
KOG0293|consensus	519		94.21
KOG0289|consensus	506		94.21
KOG0263|consensus	707		94.09
KOG0268|consensus	433		93.91
smart00284	255	OLF Olfactomedin-like domains.	93.78
KOG0292|consensus	1202		93.75
KOG2055|consensus	514		93.64
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	93.45
KOG1274|consensus	933		93.44
KOG0263|consensus	707		93.17
PRK13616	591	lipoprotein LpqB; Provisional	93.13
KOG0286|consensus	343		93.07
KOG4328|consensus	498		93.07
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	92.98
COG3211	616	PhoX Predicted phosphatase [General function predi	92.96
KOG1539|consensus	910		92.58
KOG0294|consensus	362		92.55
KOG2048|consensus	691		92.55
KOG0272|consensus	459		92.49
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	92.49
KOG3621|consensus	726		92.35
KOG0277|consensus	311		92.28
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	92.24
KOG0303|consensus	472		92.24
KOG0308|consensus	735		92.06
KOG0264|consensus	422		92.06
KOG0639|consensus	705		91.71
KOG0308|consensus	735		91.47
COG3211	616	PhoX Predicted phosphatase [General function predi	91.46
KOG0276|consensus	794		91.4
KOG0273|consensus	524		91.25
COG4247	364	Phy 3-phytase (myo-inositol-hexaphosphate 3-phosph	91.22
KOG0282|consensus	503		91.13
KOG3914|consensus	390		91.05
PHA02713	557	hypothetical protein; Provisional	90.96
KOG0286|consensus	343		90.51
KOG0282|consensus	503		90.42
KOG0319|consensus	775		90.21
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	90.16
KOG0281|consensus	499		89.96
KOG0646|consensus	476		89.78
KOG1517|consensus	1387		89.37
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	88.79
KOG0319|consensus	775		88.52
COG4247	364	Phy 3-phytase (myo-inositol-hexaphosphate 3-phosph	88.34
KOG0306|consensus	888		88.21
smart00284	255	OLF Olfactomedin-like domains.	88.18
KOG0270|consensus	463		87.84
KOG0645|consensus	312		87.74
KOG0641|consensus	350		87.6
KOG1407|consensus	313		87.11
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	86.99
KOG0639|consensus	705		86.97
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	86.85
PHA02713	557	hypothetical protein; Provisional	86.29
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	86.0
KOG0284|consensus	464		85.26
KOG1407|consensus	313		85.11
KOG2111|consensus	346		84.87
KOG0640|consensus	430		84.25
KOG0275|consensus	508		84.04
PRK10115	686	protease 2; Provisional	83.3
KOG0307|consensus	1049		83.27
KOG2110|consensus	391		83.18
KOG0973|consensus	942		83.03
KOG0649|consensus	325		82.71
KOG0772|consensus	641		81.85
PF02191	250	OLF: Olfactomedin-like domain; InterPro: IPR003112	81.83
KOG2139|consensus	445		81.52
COG1770	682	PtrB Protease II [Amino acid transport and metabol	80.57
KOG0918|consensus	476		80.32

>KOG1214|consensus

Probab=100.00  E-value=1.4e-45  Score=308.93  Aligned_cols=229  Identities=42%  Similarity=0.782  Sum_probs=220.7

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      +++||+||..+..+||+|+... .|.+..|+|...++++..++..|+||||||+.+++||+|+.+.+|.+..++|+.+++
T Consensus      1026 IiVGidfDC~e~mvyWtDv~g~-SI~rasL~G~Ep~ti~n~~L~SPEGiAVDh~~Rn~ywtDS~lD~IevA~LdG~~rkv 1104 (1289)
T KOG1214|consen 1026 IIVGIDFDCRERMVYWTDVAGR-SISRASLEGAEPETIVNSGLISPEGIAVDHIRRNMYWTDSVLDKIEVALLDGSERKV 1104 (1289)
T ss_pred             eeeeeecccccceEEEeecCCC-ccccccccCCCCceeecccCCCccceeeeeccceeeeeccccchhheeecCCceeeE
Confidence            4789999999999999999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ++.+.+-+|++|++|+.+|.|||+||++++++|.+.+|||++.+++++.+ +.-||||+||+..+.|.|+|.++++++++
T Consensus      1105 Lf~tdLVNPR~iv~D~~rgnLYwtDWnRenPkIets~mDG~NrRilin~D-igLPNGLtfdpfs~~LCWvDAGt~rleC~ 1183 (1289)
T KOG1214|consen 1105 LFYTDLVNPRAIVVDPIRGNLYWTDWNRENPKIETSSMDGENRRILINTD-IGLPNGLTFDPFSKLLCWVDAGTKRLECT 1183 (1289)
T ss_pred             EEeecccCcceEEeecccCceeeccccccCCcceeeccCCccceEEeecc-cCCCCCceeCcccceeeEEecCCcceeEe
Confidence            99999999999999999999999999999999999999999999999988 99999999999999999999999999999


Q ss_pred             ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCCCC
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG  232 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~~~  232 (232)
                      .++|..|+++.+.++.|++|+-+++.+|||||+.+.|.++++.+++.+..+.+..++ +-+||+.+.++||+
T Consensus      1184 ~p~g~gRR~i~~~LqYPF~itsy~~~fY~TDWk~n~vvsv~~~~~~~td~~~p~~~s-~lyGItav~~~Cp~ 1254 (1289)
T KOG1214|consen 1184 LPDGTGRRVIQNNLQYPFSITSYADHFYHTDWKRNGVVSVNKHSGQFTDEYLPEQRS-HLYGITAVYPYCPT 1254 (1289)
T ss_pred             cCCCCcchhhhhcccCceeeeeccccceeeccccCceEEeecccccccccccccccc-ceEEEEeccccCCC
Confidence            999999999999999999999999899999999999999999999988888777666 48999999999995

>KOG1214|consensus

Probab=99.96  E-value=1.1e-27  Score=201.97  Aligned_cols=211  Identities=27%  Similarity=0.480  Sum_probs=184.9

Q ss_pred             CCCEEEEEEcCCCCcEEEEEcCCCceeE-----EEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC
Q psy5751          10 VEGQVYYSSVADKSSIKRAHLDGKNVED-----VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK   84 (232)
Q Consensus        10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~-----~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~   84 (232)
                      ....|.++...   .|....++|....+     ++.-.-.-|.||++|...+++||+|-....|.+..++|...+.+++.
T Consensus       989 ~gt~LL~aqg~---~I~~lplng~~~~K~~ak~~l~~p~~IiVGidfDC~e~mvyWtDv~g~SI~rasL~G~Ep~ti~n~ 1065 (1289)
T KOG1214|consen  989 VGTFLLYAQGQ---QIGYLPLNGTRLQKDAAKTLLSLPGSIIVGIDFDCRERMVYWTDVAGRSISRASLEGAEPETIVNS 1065 (1289)
T ss_pred             CcceEEEeccc---eEEEeecCcchhchhhhhceEecccceeeeeecccccceEEEeecCCCccccccccCCCCceeecc
Confidence            34566665543   79999999865433     22223367899999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEec
Q psy5751          85 DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTI  162 (232)
Q Consensus        85 ~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~  162 (232)
                      .+..|.|||||+..+.+||+|+.  ..+|.++.|||+.+++++... |-+|.+|.+|+-.+.|||+|++  +.+|.+.+|
T Consensus      1066 ~L~SPEGiAVDh~~Rn~ywtDS~--lD~IevA~LdG~~rkvLf~td-LVNPR~iv~D~~rgnLYwtDWnRenPkIets~m 1142 (1289)
T KOG1214|consen 1066 GLISPEGIAVDHIRRNMYWTDSV--LDKIEVALLDGSERKVLFYTD-LVNPRAIVVDPIRGNLYWTDWNRENPKIETSSM 1142 (1289)
T ss_pred             cCCCccceeeeeccceeeeeccc--cchhheeecCCceeeEEEeec-ccCcceEEeecccCceeeccccccCCcceeecc
Confidence            99999999999999999999987  557999999999999999988 9999999999999999999997  569999999


Q ss_pred             CCCceEEEec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         163 RNRVRRKVYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       163 ~g~~~~~~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ||.++++++. .+..|+||.++  ...|-|.|.+++++....++|...+++.   .+++.|++|+-++++
T Consensus      1143 DG~NrRilin~DigLPNGLtfdpfs~~LCWvDAGt~rleC~~p~g~gRR~i~---~~LqYPF~itsy~~~ 1209 (1289)
T KOG1214|consen 1143 DGENRRILINTDIGLPNGLTFDPFSKLLCWVDAGTKRLECTLPDGTGRRVIQ---NNLQYPFSITSYADH 1209 (1289)
T ss_pred             CCccceEEeecccCCCCCceeCcccceeeEEecCCcceeEecCCCCcchhhh---hcccCceeeeecccc
Confidence            9999998865 88999999995  7789999999999999999998888775   668899999988764

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.95  E-value=2.6e-25  Score=173.68  Aligned_cols=213  Identities=22%  Similarity=0.320  Sum_probs=167.4

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|+|+.|+..++.|||+|...+ +|++++.++.....+...   .|.|++++...+.||+++..  .+.+.++.....+.
T Consensus         1 l~Egp~~d~~~g~l~~~D~~~~-~i~~~~~~~~~~~~~~~~---~~~G~~~~~~~g~l~v~~~~--~~~~~d~~~g~~~~   74 (246)
T PF08450_consen    1 LGEGPVWDPRDGRLYWVDIPGG-RIYRVDPDTGEVEVIDLP---GPNGMAFDRPDGRLYVADSG--GIAVVDPDTGKVTV   74 (246)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT-EEEEEETTTTEEEEEESS---SEEEEEEECTTSEEEEEETT--CEEEEETTTTEEEE
T ss_pred             CCcceEEECCCCEEEEEEcCCC-EEEEEECCCCeEEEEecC---CCceEEEEccCCEEEEEEcC--ceEEEecCCCcEEE
Confidence            3789999999999999999999 999999998765333332   49999999557999999975  44555877776666


Q ss_pred             EEeC-----CCCCceEEEEeCCCCeEEEEEcCCCC------CcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEE
Q psy5751          81 IVSK-----DLVNPRGIVVHPYYRKLFWSDWNRSG------PKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCW  149 (232)
Q Consensus        81 ~~~~-----~~~~p~~iavd~~~~~ly~~d~~~~~------~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~  149 (232)
                      ++..     .+..|+++++++ +|.||+++.....      ++|++.+.+ .....+...  +..||||+++++++.||+
T Consensus        75 ~~~~~~~~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~--~~~pNGi~~s~dg~~lyv  150 (246)
T PF08450_consen   75 LADLPDGGVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG--LGFPNGIAFSPDGKTLYV  150 (246)
T ss_dssp             EEEEETTCSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE--ESSEEEEEEETTSSEEEE
T ss_pred             EeeccCCCcccCCCceEEEcC-CCCEEEEecCCCccccccccceEEECCC-CeEEEEecC--cccccceEECCcchheee
Confidence            6652     578899999998 7889999875332      679999999 444555544  889999999999889999


Q ss_pred             EECCCCcEEEEecCC--C---ceEEEec--C-CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCccee
Q psy5751         150 VDADSKSLECMTIRN--R---VRRKVYS--N-CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYM  220 (232)
Q Consensus       150 ~d~~~~~i~~~~~~g--~---~~~~~~~--~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p  220 (232)
                      +|+..++|++++++.  .   .++++..  . ...|+|++++ +|+||++.+.+++|.+++++|+....+..+.  . .|
T Consensus       151 ~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~G~~~~~i~~p~--~-~~  227 (246)
T PF08450_consen  151 ADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPDGKLLREIELPV--P-RP  227 (246)
T ss_dssp             EETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETTSCEEEEEE-SS--S-SE
T ss_pred             cccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCCccEEEEEcCCC--C-CE
Confidence            999999999999973  2   2344433  2 2469999998 7999999999999999999999888888763  2 67


Q ss_pred             EEEEEE
Q psy5751         221 YGIAAV  226 (232)
Q Consensus       221 ~gi~~~  226 (232)
                      ..+++.
T Consensus       228 t~~~fg  233 (246)
T PF08450_consen  228 TNCAFG  233 (246)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            777774

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.92  E-value=2.1e-22  Score=183.43  Aligned_cols=226  Identities=16%  Similarity=0.268  Sum_probs=174.1

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-------------CCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-------------TNIRSPEGLTFDWVNRVLYWTDSQMDT   67 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-------------~~~~~p~gl~~d~~~~~ly~~d~~~~~   67 (232)
                      +|-++++|..++.||++|..++ +|.+++++|.....+..             ..+..|.||++|..++.|||+|..+++
T Consensus       569 ~P~gvavd~~~g~lyVaDs~n~-rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~  647 (1057)
T PLN02919        569 FPGKLAIDLLNNRLFISDSNHN-RIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHA  647 (1057)
T ss_pred             CCceEEEECCCCeEEEEECCCC-eEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCce
Confidence            3668999988899999999999 99999999865433322             124679999999878889999999999


Q ss_pred             EEEEeCCCCCCEEEEeC----------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc--
Q psy5751          68 ISMANLNDDQPKVIVSK----------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA--  129 (232)
Q Consensus        68 I~~~~~~g~~~~~~~~~----------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~--  129 (232)
                      |.++++.+.....+...                .++.|.++++++.++.||+++..  .++|++++..+.....+...  
T Consensus       648 Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~--~~~I~v~d~~~g~v~~~~G~G~  725 (1057)
T PLN02919        648 LREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAG--QHQIWEYNISDGVTRVFSGDGY  725 (1057)
T ss_pred             EEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECC--CCeEEEEECCCCeEEEEecCCc
Confidence            99999887665555321                15689999999988999999976  56798888765544332210  


Q ss_pred             -----------CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEe----------------------cCCCc
Q psy5751         130 -----------ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY----------------------SNCTY  176 (232)
Q Consensus       130 -----------~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~----------------------~~~~~  176 (232)
                                 ..+..|+||++++++++||++|..+++|.++++++.....+.                      ..+.+
T Consensus       726 ~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~  805 (1057)
T PLN02919        726 ERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQH  805 (1057)
T ss_pred             cccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccC
Confidence                       125689999999998899999999999999999865443322                      12567


Q ss_pred             eEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEecc-----------CCcceeEEEEEEcCC
Q psy5751         177 PFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDM-----------MGTTYMYGIAAVPSS  229 (232)
Q Consensus       177 p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~-----------~~~~~p~gi~~~~~~  229 (232)
                      |.|++++ +|.||++|+.+++|.++++.+.....+.-.+           .....|.||++.+++
T Consensus       806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG  870 (1057)
T PLN02919        806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENG  870 (1057)
T ss_pred             CceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCC
Confidence            9999997 6789999999999999999876655443211           124579999998764

>KOG1215|consensus

Probab=99.92  E-value=5.9e-23  Score=185.86  Aligned_cols=220  Identities=33%  Similarity=0.654  Sum_probs=192.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      ++++++++..++.+||+|.... .|.+...++.....+...+.-.+.++++||+.+++||+|.....|.+.+++|..+.+
T Consensus       438 ~~~~~d~d~~~~~i~~~d~~~~-~i~~~~~~~~~~~~~~~~g~~~~~~lavD~~~~~~y~tDe~~~~i~v~~~~g~~~~v  516 (877)
T KOG1215|consen  438 NAVALDFDVLNNRIYWADLSDE-KICRASQDGSSECELCGDGLCIPEGLAVDWIGDNIYWTDEGNCLIEVADLDGSSRKV  516 (877)
T ss_pred             cceEEEEEecCCEEEEEeccCC-eEeeeccCCCccceEeccCccccCcEEEEeccCCceecccCCceeEEEEccCCceeE
Confidence            3578899999999999999999 999999999887676777788999999999999999999999999999999999888


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC-cEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK-SLEC  159 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~~  159 (232)
                      ++...+..|+.++++|..+.+||++++. ..+|.+..++|.....++... +..|+|+++|...+++||+|.... .|..
T Consensus       517 l~~~~l~~~r~~~v~p~~g~~~wtd~~~-~~~i~ra~~dg~~~~~l~~~~-~~~p~glt~d~~~~~~yw~d~~~~~~i~~  594 (877)
T KOG1215|consen  517 LVSKDLDLPRSIAVDPEKGLMFWTDWGQ-PPRIERASLDGSERAVLVTNG-ILWPNGLTIDYETDRLYWADAKLDYTIES  594 (877)
T ss_pred             EEecCCCCccceeeccccCeeEEecCCC-CchhhhhcCCCCCceEEEeCC-ccCCCcceEEeecceeEEEcccCCcceee
Confidence            8887779999999999999999999997 459999999999999999987 899999999999999999999988 7999


Q ss_pred             EecCCCceE-EEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEE
Q psy5751         160 MTIRNRVRR-KVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAV  226 (232)
Q Consensus       160 ~~~~g~~~~-~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~  226 (232)
                      ++++|.+++ .....+.+|.+++++++++||+++....+.+..+. ++. + +.. ......|..++.+
T Consensus       595 ~~~~g~~r~~~~~~~~~~p~~~~~~~~~iyw~d~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~  660 (877)
T KOG1215|consen  595 ANMDGQNRRVVDSEDLPHPFGLSVFEDYIYWTDWSNRAISRAEKHKGSD-S-RTS-RSNLAQPLDIILV  660 (877)
T ss_pred             eecCCCceEEeccccCCCceEEEEecceeEEeeccccceEeeecccCCc-c-eee-ecccCcccceEEE
Confidence            999999987 33558999999999999999999999988888877 434 2 111 2335566665555

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.89  E-value=3.9e-20  Score=168.71  Aligned_cols=202  Identities=15%  Similarity=0.253  Sum_probs=160.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC----------------CCCCccEEEEeecCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT----------------NIRSPEGLTFDWVNRVLYWTDSQM   65 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~----------------~~~~p~gl~~d~~~~~ly~~d~~~   65 (232)
                      |.++++++.++.||++|..++ +|+++++.+....++...                .++.|.++++|+.++.||++|..+
T Consensus       626 P~GIavd~~gn~LYVaDt~n~-~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~  704 (1057)
T PLN02919        626 PQGLAYNAKKNLLYVADTENH-ALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ  704 (1057)
T ss_pred             CcEEEEeCCCCEEEEEeCCCc-eEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC
Confidence            789999998899999999988 999999887655444221                156899999999889999999999


Q ss_pred             CeEEEEeCCCCCCEEEEe--------------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc--
Q psy5751          66 DTISMANLNDDQPKVIVS--------------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA--  129 (232)
Q Consensus        66 ~~I~~~~~~g~~~~~~~~--------------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~--  129 (232)
                      ++|++++..+.....+..              ..+..|.+|++++.++.||+++..  .++|.++++++.....+...  
T Consensus       705 ~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~--n~~Irv~D~~tg~~~~~~gg~~  782 (1057)
T PLN02919        705 HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE--SSSIRALDLKTGGSRLLAGGDP  782 (1057)
T ss_pred             CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC--CCeEEEEECCCCcEEEEEeccc
Confidence            999999987654433221              135789999999977789999976  57899999876554333210  


Q ss_pred             ------------------CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec--------------CCCce
Q psy5751         130 ------------------ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS--------------NCTYP  177 (232)
Q Consensus       130 ------------------~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~--------------~~~~p  177 (232)
                                        ..+..|.|++++++ +.||++|..+++|.+++.++.....+..              .+..|
T Consensus       783 ~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~d-G~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P  861 (1057)
T PLN02919        783 TFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKD-GQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEP  861 (1057)
T ss_pred             ccCcccccccCCCCchhhhhccCCceeeEeCC-CcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCc
Confidence                              02457999999987 6799999999999999998776655432              35679


Q ss_pred             EEEEEE-CCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751         178 FGLSIT-DEKYYWTDWKTNRIESANKEGERA  207 (232)
Q Consensus       178 ~gla~~-~~~ly~td~~~~~i~~~~~~g~~~  207 (232)
                      .||+++ +|+||++|..+++|..++..+...
T Consensus       862 ~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        862 AGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             eEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            999996 789999999999999999985443

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.3e-19  Score=144.02  Aligned_cols=207  Identities=17%  Similarity=0.222  Sum_probs=152.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-CCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-DDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~   80 (232)
                      .+|..|+...+.|||+|+.++ +|.+++......+....+. ..+.+..+|. .+.|..++..   +++.+.+ +..+..
T Consensus        27 gEgP~w~~~~~~L~w~DI~~~-~i~r~~~~~g~~~~~~~p~-~~~~~~~~d~-~g~Lv~~~~g---~~~~~~~~~~~~t~  100 (307)
T COG3386          27 GEGPVWDPDRGALLWVDILGG-RIHRLDPETGKKRVFPSPG-GFSSGALIDA-GGRLIACEHG---VRLLDPDTGGKITL  100 (307)
T ss_pred             ccCccCcCCCCEEEEEeCCCC-eEEEecCCcCceEEEECCC-CcccceeecC-CCeEEEEccc---cEEEeccCCceeEE
Confidence            356789999999999999999 9999999854443444333 4567777776 6777766654   3333333 222233


Q ss_pred             EEe----CCCCCceEEEEeCCCCeEEEEEcC---------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEE
Q psy5751          81 IVS----KDLVNPRGIVVHPYYRKLFWSDWN---------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDEL  147 (232)
Q Consensus        81 ~~~----~~~~~p~~iavd~~~~~ly~~d~~---------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~L  147 (232)
                      +..    ....+|++..++| .|.+|+++..         +..+.+|+++.+|...+.+.. . +..||||++++++..|
T Consensus       101 ~~~~~~~~~~~r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~-~-~~~~NGla~SpDg~tl  177 (307)
T COG3386         101 LAEPEDGLPLNRPNDGVVDP-DGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDD-D-LTIPNGLAFSPDGKTL  177 (307)
T ss_pred             eccccCCCCcCCCCceeEcC-CCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecC-c-EEecCceEECCCCCEE
Confidence            333    3567899999998 7999999887         335689999886555444433 3 8899999999999999


Q ss_pred             EEEECCCCcEEEEecC---CC--ceE-EEec--CCCceEEEEEE-CCEEE-EEeCCCCcEEEEeCCCCCcceEEeccCCc
Q psy5751         148 CWVDADSKSLECMTIR---NR--VRR-KVYS--NCTYPFGLSIT-DEKYY-WTDWKTNRIESANKEGERAPSIALDMMGT  217 (232)
Q Consensus       148 y~~d~~~~~i~~~~~~---g~--~~~-~~~~--~~~~p~gla~~-~~~ly-~td~~~~~i~~~~~~g~~~~~i~~~~~~~  217 (232)
                      |++|+..++|++++++   +.  +++ .+..  .-..|+|+++| +|.|| .+.++..+|.+++++|.....+.+|...+
T Consensus       178 y~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l~~~i~lP~~~~  257 (307)
T COG3386         178 YVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKLLGEIKLPVKRP  257 (307)
T ss_pred             EEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCCCcEEEEEECCCCCC
Confidence            9999999999999987   22  222 2222  34789999998 66777 55666669999999999999999885333

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.82  E-value=9.7e-18  Score=130.99  Aligned_cols=175  Identities=20%  Similarity=0.229  Sum_probs=135.9

Q ss_pred             ccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEE
Q psy5751          46 PEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREI  125 (232)
Q Consensus        46 p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~  125 (232)
                      ++|++.|...+.|||+|...++|++++.++.....+..   ..|.|++++..++.||+++..    .+...++.....+.
T Consensus         2 ~Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~---~~~~G~~~~~~~g~l~v~~~~----~~~~~d~~~g~~~~   74 (246)
T PF08450_consen    2 GEGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDL---PGPNGMAFDRPDGRLYVADSG----GIAVVDPDTGKVTV   74 (246)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEES---SSEEEEEEECTTSEEEEEETT----CEEEEETTTTEEEE
T ss_pred             CcceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEec---CCCceEEEEccCCEEEEEEcC----ceEEEecCCCcEEE
Confidence            68999998899999999999999999999876555433   239999999558999999954    35666887777776


Q ss_pred             EEEcC----CCCCcceEEEeCCCCEEEEEECCC--------CcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEe
Q psy5751         126 FLKAA----DLKLPNSLAVDFRTDELCWVDADS--------KSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTD  191 (232)
Q Consensus       126 ~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~--------~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td  191 (232)
                      +....    ....||++++|++ |+||+++...        +++++++.+ ++.+.+.+.+..|+||++.  +..||+++
T Consensus        75 ~~~~~~~~~~~~~~ND~~vd~~-G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~d  152 (246)
T PF08450_consen   75 LADLPDGGVPFNRPNDVAVDPD-GNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVAD  152 (246)
T ss_dssp             EEEEETTCSCTEEEEEEEE-TT-S-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEE
T ss_pred             EeeccCCCcccCCCceEEEcCC-CCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecc
Confidence            66541    3778999999997 7899998764        569999999 5667778889999999996  56899999


Q ss_pred             CCCCcEEEEeCCCCCc-----ceEEeccCCcceeEEEEEEcCC
Q psy5751         192 WKTNRIESANKEGERA-----PSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       192 ~~~~~i~~~~~~g~~~-----~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ...++|++++.+....     +.+.......+.|.|+++..++
T Consensus       153 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G  195 (246)
T PF08450_consen  153 SFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDG  195 (246)
T ss_dssp             TTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS
T ss_pred             cccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCC
Confidence            9999999999973332     2232222233579999998765

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.68  E-value=4.1e-13  Score=109.90  Aligned_cols=200  Identities=15%  Similarity=0.164  Sum_probs=146.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeE---EEe----------CCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVED---VIT----------TNIRSPEGLTFDWVNRVLYWTDSQMDT   67 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~---~~~----------~~~~~p~gl~~d~~~~~ly~~d~~~~~   67 (232)
                      |..+++++....||+++...+ .|..+.++.. ....   +..          ....+|..+.+++.++.+|++|.+..+
T Consensus        89 p~~i~~~~~g~~l~vany~~g-~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~  167 (345)
T PF10282_consen   89 PCHIAVDPDGRFLYVANYGGG-SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADR  167 (345)
T ss_dssp             EEEEEECTTSSEEEEEETTTT-EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTE
T ss_pred             cEEEEEecCCCEEEEEEccCC-eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCE
Confidence            678999999999999999988 8888888742 2211   221          124688999999999999999999999


Q ss_pred             EEEEeCCCCC--C---EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC--CCCcEEEEEcC-------CCC
Q psy5751          68 ISMANLNDDQ--P---KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD--GTDREIFLKAA-------DLK  133 (232)
Q Consensus        68 I~~~~~~g~~--~---~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~--g~~~~~~~~~~-------~~~  133 (232)
                      |++++++...  .   ..+--.....|+.++++|..+.+|++...  .+.|..++++  ....+.+....       ...
T Consensus       168 v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~--s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~  245 (345)
T PF10282_consen  168 VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNEL--SNTVSVFDYDPSDGSLTEIQTISTLPEGFTGEN  245 (345)
T ss_dssp             EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESCETTSCSSS
T ss_pred             EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCC--CCcEEEEeecccCCceeEEEEeeeccccccccC
Confidence            9999987765  2   12222567789999999988999999855  4567777766  22222221111       012


Q ss_pred             CcceEEEeCCCCEEEEEECCCCcEEEEecCC--CceEEE---ecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCC
Q psy5751         134 LPNSLAVDFRTDELCWVDADSKSLECMTIRN--RVRRKV---YSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       134 ~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g--~~~~~~---~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g  204 (232)
                      .|.+|++++++++||+++...+.|..++++.  +..+.+   -.....|.++++  ++.+||+++..++.|..++.+.
T Consensus       246 ~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~  323 (345)
T PF10282_consen  246 APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP  323 (345)
T ss_dssp             SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred             CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence            6889999999999999999999999999853  333333   225777999999  5789999999999999887763

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.64  E-value=1.4e-12  Score=106.75  Aligned_cols=226  Identities=16%  Similarity=0.159  Sum_probs=156.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCC--CCcEEEEEcCCC--ceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVAD--KSSIKRAHLDGK--NVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~--~~~i~~~~~~g~--~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      |.-+++++..+.||.++...  .+.|..+.++..  ..+.+-  ...-..|..+++|+.++.||++++..+.+.+++++.
T Consensus        39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~  118 (345)
T PF10282_consen   39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD  118 (345)
T ss_dssp             ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence            56788999999999999852  237777776643  332222  123468899999999999999999999998888765


Q ss_pred             CC--CEE--EEe----------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEE--EEEcCCCCCcce
Q psy5751          76 DQ--PKV--IVS----------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REI--FLKAADLKLPNS  137 (232)
Q Consensus        76 ~~--~~~--~~~----------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~--~~~~~~~~~p~~  137 (232)
                      ..  ...  +..          ....+|..+.++|.+++||++|.+.  .+|+.++++...  ...  .+.......|..
T Consensus       119 ~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~--D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh  196 (345)
T PF10282_consen  119 DGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA--DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRH  196 (345)
T ss_dssp             TSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT--TEEEEEEE-TTS-TEEEEEEEECSTTSSEEE
T ss_pred             CcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC--CEEEEEEEeCCCceEEEeeccccccCCCCcE
Confidence            32  222  221          1356889999999889999999874  568888876654  322  122223678999


Q ss_pred             EEEeCCCCEEEEEECCCCcEEEEecC--CCceEEEe--c-------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-
Q psy5751         138 LAVDFRTDELCWVDADSKSLECMTIR--NRVRRKVY--S-------NCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-  203 (232)
Q Consensus       138 l~~d~~~~~Ly~~d~~~~~i~~~~~~--g~~~~~~~--~-------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-  203 (232)
                      +++++++.++|+++...+.|..++++  .+..+.+.  .       ....|.+|++.  +.+||+++.+.+.|..++.+ 
T Consensus       197 ~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~  276 (345)
T PF10282_consen  197 LAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDP  276 (345)
T ss_dssp             EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECT
T ss_pred             EEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEec
Confidence            99999999999999999999999888  33333221  1       12368889985  77999999999998888875 


Q ss_pred             -CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         204 -GERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       204 -g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                       ++.++.+..-.-+-..|.++++.+++
T Consensus       277 ~~g~l~~~~~~~~~G~~Pr~~~~s~~g  303 (345)
T PF10282_consen  277 ATGTLTLVQTVPTGGKFPRHFAFSPDG  303 (345)
T ss_dssp             TTTTEEEEEEEEESSSSEEEEEE-TTS
T ss_pred             CCCceEEEEEEeCCCCCccEEEEeCCC
Confidence             33444443322223359999997664

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.64  E-value=1.5e-12  Score=106.07  Aligned_cols=222  Identities=15%  Similarity=0.141  Sum_probs=150.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      .|..+++++.++.||.++...+ .|..++++  |...+.+. ......|.++++++.++.+|+++...+.|.+++++...
T Consensus        81 ~p~~i~~~~~g~~l~v~~~~~~-~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g  159 (330)
T PRK11028         81 SPTHISTDHQGRFLFSASYNAN-CVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG  159 (330)
T ss_pred             CceEEEECCCCCEEEEEEcCCC-eEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC
Confidence            3678999999999999998877 88888776  32211111 12346789999999899999999999999999986532


Q ss_pred             C------EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEEEEcC-------CCCCcceEEEeC
Q psy5751          78 P------KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIFLKAA-------DLKLPNSLAVDF  142 (232)
Q Consensus        78 ~------~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~~~~~-------~~~~p~~l~~d~  142 (232)
                      .      ..+.......|++++++|..++||+++..  .+.|...+++.  ...+.+....       ...+|.++++++
T Consensus       160 ~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~--~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~p  237 (330)
T PRK11028        160 HLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNEL--NSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITP  237 (330)
T ss_pred             cccccCCCceecCCCCCCceEEECCCCCEEEEEecC--CCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECC
Confidence            1      11111234679999999988899999865  45677777652  2222221110       012455799999


Q ss_pred             CCCEEEEEECCCCcEEEEecC--CCceEEEec--CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC--CCCcceEEecc
Q psy5751         143 RTDELCWVDADSKSLECMTIR--NRVRRKVYS--NCTYPFGLSIT--DEKYYWTDWKTNRIESANKE--GERAPSIALDM  214 (232)
Q Consensus       143 ~~~~Ly~~d~~~~~i~~~~~~--g~~~~~~~~--~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~--g~~~~~i~~~~  214 (232)
                      ++++||+++...+.|..++++  +...+.+..  ....|.++++.  +.+||+++..++.|..++.+  +..++.+.. .
T Consensus       238 dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~-~  316 (330)
T PRK11028        238 DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGR-Y  316 (330)
T ss_pred             CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEccc-c
Confidence            999999998888888887774  333333322  33578888884  77999999888888887654  333443322 1


Q ss_pred             CCcceeEEEEEE
Q psy5751         215 MGTTYMYGIAAV  226 (232)
Q Consensus       215 ~~~~~p~gi~~~  226 (232)
                      .....|..|++.
T Consensus       317 ~~g~~P~~~~~~  328 (330)
T PRK11028        317 AVGQGPMWVSVL  328 (330)
T ss_pred             ccCCCceEEEEE
Confidence            224578888874

>KOG1215|consensus

Probab=99.63  E-value=7.5e-14  Score=127.00  Aligned_cols=199  Identities=27%  Similarity=0.491  Sum_probs=166.6

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW  103 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~  103 (232)
                      .+.++.++.... .........+..+.+|..++.+||+|.....|.....++.....+...+.-.|.++++|...+.+||
T Consensus       418 ~ir~~~~~~~~~-~~p~~~~~~~~~~d~d~~~~~i~~~d~~~~~i~~~~~~~~~~~~~~~~g~~~~~~lavD~~~~~~y~  496 (877)
T KOG1215|consen  418 DIRRISLDCSDV-SRPLEGIKNAVALDFDVLNNRIYWADLSDEKICRASQDGSSECELCGDGLCIPEGLAVDWIGDNIYW  496 (877)
T ss_pred             cceecccCCCcc-eEEccCCccceEEEEEecCCEEEEEeccCCeEeeeccCCCccceEeccCccccCcEEEEeccCCcee
Confidence            566666765522 2222334678888888889999999999999999999999877777778889999999999999999


Q ss_pred             EEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC-CCcEEEEecCCCceEEEec-CCCceEEEE
Q psy5751         104 SDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD-SKSLECMTIRNRVRRKVYS-NCTYPFGLS  181 (232)
Q Consensus       104 ~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~-~~~i~~~~~~g~~~~~~~~-~~~~p~gla  181 (232)
                      +|..  ...|.+.+++|....+++... +..|..+++++..+.+||+|++ ..+|.+..++|..+..+.. +..+|.|++
T Consensus       497 tDe~--~~~i~v~~~~g~~~~vl~~~~-l~~~r~~~v~p~~g~~~wtd~~~~~~i~ra~~dg~~~~~l~~~~~~~p~glt  573 (877)
T KOG1215|consen  497 TDEG--NCLIEVADLDGSSRKVLVSKD-LDLPRSIAVDPEKGLMFWTDWGQPPRIERASLDGSERAVLVTNGILWPNGLT  573 (877)
T ss_pred             cccC--CceeEEEEccCCceeEEEecC-CCCccceeeccccCeeEEecCCCCchhhhhcCCCCCceEEEeCCccCCCcce
Confidence            9976  456888889999888888776 6899999999999999999998 4589999999999988866 589999999


Q ss_pred             EE--CCEEEEEeCCCC-cEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         182 IT--DEKYYWTDWKTN-RIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       182 ~~--~~~ly~td~~~~-~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      .+  .+.+||+|.... .+.+++.+|.+.+  ........+|++++++.+
T Consensus       574 ~d~~~~~~yw~d~~~~~~i~~~~~~g~~r~--~~~~~~~~~p~~~~~~~~  621 (877)
T KOG1215|consen  574 IDYETDRLYWADAKLDYTIESANMDGQNRR--VVDSEDLPHPFGLSVFED  621 (877)
T ss_pred             EEeecceeEEEcccCCcceeeeecCCCceE--EeccccCCCceEEEEecc
Confidence            85  889999999988 7999999999987  222355779999998875

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=99.61  E-value=1.7e-12  Score=107.47  Aligned_cols=223  Identities=13%  Similarity=0.182  Sum_probs=167.9

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      +|.++.+++....+|+++...+ .+..++.. ....+. ...+...|.++++...+.++|+.+...+.|.+.+.......
T Consensus        32 ~~~~v~~~~~g~~~~v~~~~~~-~~~~~~~~-~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~  109 (381)
T COG3391          32 GPGGVAVNPDGTQVYVANSGSN-DVSVIDAT-SNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVL  109 (381)
T ss_pred             CCceeEEcCccCEEEEEeecCc-eeeecccc-cceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCccccee
Confidence            3678899998889999998877 77777666 332222 33344789999999999999999999999999996655543


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      .... ....|.++++++.++.+|+++.+...+.+..++............  ...|.++++++.+.++|+++...+.|..
T Consensus       110 ~~~~-vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v--G~~P~~~a~~p~g~~vyv~~~~~~~v~v  186 (381)
T COG3391         110 GSIP-VGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV--GNTPTGVAVDPDGNKVYVTNSDDNTVSV  186 (381)
T ss_pred             eEee-eccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec--CCCcceEEECCCCCeEEEEecCCCeEEE
Confidence            3333 223899999999999999999853356788777665443333222  3478999999999999999999999999


Q ss_pred             EecCCCceEE-----EecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         160 MTIRNRVRRK-----VYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       160 ~~~~g~~~~~-----~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ++.++.....     .......|.++++  +..++|+++..+  +.+..++...........+.... .|.++++.++.
T Consensus       187 i~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g  264 (381)
T COG3391         187 IDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAG  264 (381)
T ss_pred             EeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCC
Confidence            9988765442     2446788999998  467899999988  68988888876666554455445 78888876653

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.60  E-value=4e-12  Score=103.52  Aligned_cols=223  Identities=13%  Similarity=0.098  Sum_probs=147.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--CCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--DDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--g~~   77 (232)
                      |..+++++..+.||++....+ .|..++++.. ....+-. .....|..+++++.++.||.+....+.|.+.+++  |..
T Consensus        37 ~~~l~~spd~~~lyv~~~~~~-~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~  115 (330)
T PRK11028         37 VQPMVISPDKRHLYVGVRPEF-RVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIP  115 (330)
T ss_pred             CccEEECCCCCEEEEEECCCC-cEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCC
Confidence            567889998899999988777 8877777632 2211111 1224789999999999999999888888888775  322


Q ss_pred             CEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE-----EEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751          78 PKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE-----IFLKAADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        78 ~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~-----~~~~~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      ...+.. .....|.+++++|.++++|+++.+  .++|...+++.....     ..........|.++++++++++||+++
T Consensus       116 ~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~--~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~  193 (330)
T PRK11028        116 VAPIQIIEGLEGCHSANIDPDNRTLWVPCLK--EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVN  193 (330)
T ss_pred             CCceeeccCCCcccEeEeCCCCCEEEEeeCC--CCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEe
Confidence            222211 244678999999988899999976  456888877642211     011111145799999999999999999


Q ss_pred             CCCCcEEEEecCC--CceEEEec--C-------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCC--CCCcceEEeccCC
Q psy5751         152 ADSKSLECMTIRN--RVRRKVYS--N-------CTYPFGLSIT--DEKYYWTDWKTNRIESANKE--GERAPSIALDMMG  216 (232)
Q Consensus       152 ~~~~~i~~~~~~g--~~~~~~~~--~-------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~--g~~~~~i~~~~~~  216 (232)
                      ...+.|..++++.  +..+.+..  .       ..+|.++++.  +.+||+++...+.|..++.+  +...+.+....- 
T Consensus       194 ~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-  272 (330)
T PRK11028        194 ELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-  272 (330)
T ss_pred             cCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-
Confidence            9889998888872  23222221  1       1234456763  56899998888888877764  444333332111 


Q ss_pred             cceeEEEEEEcC
Q psy5751         217 TTYMYGIAAVPS  228 (232)
Q Consensus       217 ~~~p~gi~~~~~  228 (232)
                      ...|.++++.++
T Consensus       273 ~~~p~~~~~~~d  284 (330)
T PRK11028        273 ETQPRGFNIDHS  284 (330)
T ss_pred             cccCCceEECCC
Confidence            235667766554

>KOG4659|consensus

Probab=99.59  E-value=2.3e-13  Score=120.82  Aligned_cols=195  Identities=21%  Similarity=0.318  Sum_probs=143.4

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe---CCCCCccEEEEeecCCeEEEEeCCCCeEEEE-eCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT---TNIRSPEGLTFDWVNRVLYWTDSQMDTISMA-NLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~---~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~-~~~g~   76 (232)
                      .|+++++-+ ++.||+.|.+   -|.|+..+|.-. .++.   ....+-.-||+++..+.||++|...++|+++ ++.++
T Consensus       366 aPvala~a~-DGSl~VGDfN---yIRRI~~dg~v~-tIl~L~~t~~sh~Yy~AvsPvdgtlyvSdp~s~qv~rv~sl~~~  440 (1899)
T KOG4659|consen  366 APVALAYAP-DGSLIVGDFN---YIRRISQDGQVS-TILTLGLTDTSHSYYIAVSPVDGTLYVSDPLSKQVWRVSSLEPQ  440 (1899)
T ss_pred             ceeeEEEcC-CCcEEEccch---heeeecCCCceE-EEEEecCCCccceeEEEecCcCceEEecCCCcceEEEeccCCcc
Confidence            388999987 9999999987   789988888654 3333   3456778899999999999999999999987 45543


Q ss_pred             CC----EEEEeC--------------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--
Q psy5751          77 QP----KVIVSK--------------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--  130 (232)
Q Consensus        77 ~~----~~~~~~--------------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--  130 (232)
                      ..    +++..+                    .+..|+||++|. .|.||++|..    .|.+++-+|-..+++-+..  
T Consensus       441 d~~~N~evvaG~Ge~Clp~desCGDGalA~dA~L~~PkGIa~dk-~g~lYfaD~t----~IR~iD~~giIstlig~~~~~  515 (1899)
T KOG4659|consen  441 DSRNNYEVVAGDGEVCLPADESCGDGALAQDAQLIFPKGIAFDK-MGNLYFADGT----RIRVIDTTGIISTLIGTTPDQ  515 (1899)
T ss_pred             ccccCeeEEeccCcCccccccccCcchhcccceeccCCceeEcc-CCcEEEeccc----EEEEeccCceEEEeccCCCCc
Confidence            21    222221                    477899999996 8999999954    4888887665333222111  


Q ss_pred             ---------------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec---------------------CC
Q psy5751         131 ---------------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS---------------------NC  174 (232)
Q Consensus       131 ---------------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---------------------~~  174 (232)
                                     .+.+|..|+++|-.+.||+.|  ++.|.++..++.-+ +++.                     .+
T Consensus       516 ~~p~~C~~~~kl~~~~leWPT~LaV~Pmdnsl~Vld--~nvvlrit~~~rV~-Ii~GrP~hC~~a~~t~~~skla~H~tl  592 (1899)
T KOG4659|consen  516 HPPRTCAQITKLVDLQLEWPTSLAVDPMDNSLLVLD--TNVVLRITVVHRVR-IILGRPTHCDLANATSSASKLADHRTL  592 (1899)
T ss_pred             cCccccccccchhheeeecccceeecCCCCeEEEee--cceEEEEccCccEE-EEcCCccccccCCCchhhhhhhhhhhh
Confidence                           278999999999999999999  56677777765322 3321                     23


Q ss_pred             CceEEEEE-ECCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751         175 TYPFGLSI-TDEKYYWTDWKTNRIESANKEGERAP  208 (232)
Q Consensus       175 ~~p~gla~-~~~~ly~td~~~~~i~~~~~~g~~~~  208 (232)
                      -.+..|++ ..|.||+++..+.+|-|+.+-+...+
T Consensus       593 ~~~r~Iavg~~G~lyvaEsD~rriNrvr~~~tdg~  627 (1899)
T KOG4659|consen  593 LIQRDIAVGTDGALYVAESDGRRINRVRKLSTDGT  627 (1899)
T ss_pred             hhhhceeecCCceEEEEeccchhhhheEEeccCce
Confidence            33678888 58999999999988888876655543

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=99.52  E-value=2.7e-11  Score=100.38  Aligned_cols=221  Identities=14%  Similarity=0.162  Sum_probs=163.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC--CCCeEEEEeCCCCCCE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS--QMDTISMANLNDDQPK   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~   79 (232)
                      |.+++++....++|+.+...+ .|.+++.........+..+ ..|.++++++.++.+|+++.  .++.+.+.+.......
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~-~v~vid~~~~~~~~~~~vG-~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~  153 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSN-TVSVIDTATNTVLGSIPVG-LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT  153 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCC-eEEEEcCcccceeeEeeec-cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence            567889999999999998888 8999996654433333333 39999999999999999999  4689999998876644


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE----cCCCCCcceEEEeCCCCEEEEEECCC-
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK----AADLKLPNSLAVDFRTDELCWVDADS-  154 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~----~~~~~~p~~l~~d~~~~~Ly~~d~~~-  154 (232)
                      .... ....|.+++++|....+|+++..  .+.|...+..+..... ..    ......|.++++++++.++|+++... 
T Consensus       154 ~~~~-vG~~P~~~a~~p~g~~vyv~~~~--~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~  229 (381)
T COG3391         154 ATIP-VGNTPTGVAVDPDGNKVYVTNSD--DNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG  229 (381)
T ss_pred             EEEe-cCCCcceEEECCCCCeEEEEecC--CCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCC
Confidence            3333 33378999999988889999954  5678888866554442 11    11267899999999999999999887 


Q ss_pred             -CcEEEEecCCCceEEE---ecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCCcc-eEEeccCCcceeEEEEEEc
Q psy5751         155 -KSLECMTIRNRVRRKV---YSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGERAP-SIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       155 -~~i~~~~~~g~~~~~~---~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~~~-~i~~~~~~~~~p~gi~~~~  227 (232)
                       +.+..++.........   .+.. .|.++++  ++..+|+++...+.+..++....... .+.........|+.++...
T Consensus       230 ~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~  308 (381)
T COG3391         230 SNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISP  308 (381)
T ss_pred             CceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceecccee
Confidence             6899988887665443   3355 8999998  47899999998899999998754444 2222223344577777655


Q ss_pred             CC
Q psy5751         228 SS  229 (232)
Q Consensus       228 ~~  229 (232)
                      ..
T Consensus       309 ~~  310 (381)
T COG3391         309 LY  310 (381)
T ss_pred             ec
Confidence            43

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=99.51  E-value=7.7e-11  Score=91.11  Aligned_cols=195  Identities=19%  Similarity=0.188  Sum_probs=124.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC--CCC-
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND--DQP-   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g--~~~-   78 (232)
                      +.|++|++.+++||...-... .|+.++++|.-.+++-..+...++||++-. ++.+.+++...++++.++.+.  ... 
T Consensus        24 ~SGLTy~pd~~tLfaV~d~~~-~i~els~~G~vlr~i~l~g~~D~EgI~y~g-~~~~vl~~Er~~~L~~~~~~~~~~~~~  101 (248)
T PF06977_consen   24 LSGLTYNPDTGTLFAVQDEPG-EIYELSLDGKVLRRIPLDGFGDYEGITYLG-NGRYVLSEERDQRLYIFTIDDDTTSLD  101 (248)
T ss_dssp             EEEEEEETTTTEEEEEETTTT-EEEEEETT--EEEEEE-SS-SSEEEEEE-S-TTEEEEEETTTTEEEEEEE----TT--
T ss_pred             ccccEEcCCCCeEEEEECCCC-EEEEEcCCCCEEEEEeCCCCCCceeEEEEC-CCEEEEEEcCCCcEEEEEEeccccccc
Confidence            579999999999998887777 999999998776666667788999999975 566666787788898887733  221 


Q ss_pred             -EE--EEe-----CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeC--CCCCcEEEEEc------CCCCCcceEEEeC
Q psy5751          79 -KV--IVS-----KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL--DGTDREIFLKA------ADLKLPNSLAVDF  142 (232)
Q Consensus        79 -~~--~~~-----~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~--~g~~~~~~~~~------~~~~~p~~l~~d~  142 (232)
                       ..  -+.     .......|+|.|+.++.||++.-. ....|+..+.  .+....+....      .....|+++++|+
T Consensus       102 ~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~-~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p  180 (248)
T PF06977_consen  102 RADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER-KPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDP  180 (248)
T ss_dssp             EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES-SSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEET
T ss_pred             hhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC-CChhhEEEccccCccceeeccccccccccceeccccceEEcC
Confidence             11  111     123346899999999999988543 2445777765  22222222211      1256799999999


Q ss_pred             CCCEEEEEECCCCcEEEEecCCCceEEE-ec--------CCCceEEEEEE-CCEEEEEeCCCCcEEEE
Q psy5751         143 RTDELCWVDADSKSLECMTIRNRVRRKV-YS--------NCTYPFGLSIT-DEKYYWTDWKTNRIESA  200 (232)
Q Consensus       143 ~~~~Ly~~d~~~~~i~~~~~~g~~~~~~-~~--------~~~~p~gla~~-~~~ly~td~~~~~i~~~  200 (232)
                      .++.||+......++..++.+|.-...+ +.        .++.|.|||++ +|.||++.-- +..++|
T Consensus       181 ~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEp-Nlfy~f  247 (248)
T PF06977_consen  181 RTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEP-NLFYRF  247 (248)
T ss_dssp             TTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETT-TEEEEE
T ss_pred             CCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCC-ceEEEe
Confidence            9999999999999999999888744433 22        35779999997 7899999864 456665

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=99.51  E-value=6e-12  Score=100.38  Aligned_cols=186  Identities=18%  Similarity=0.187  Sum_probs=138.2

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS  116 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~  116 (232)
                      .++.......+|...++..+.|||+|-..++|.+.+......++... ....+.+..++. .+.|..++.+     +.+.
T Consensus        18 ~~~~~~~~~gEgP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~-p~~~~~~~~~d~-~g~Lv~~~~g-----~~~~   90 (307)
T COG3386          18 TLLDKGATLGEGPVWDPDRGALLWVDILGGRIHRLDPETGKKRVFPS-PGGFSSGALIDA-GGRLIACEHG-----VRLL   90 (307)
T ss_pred             eEeecccccccCccCcCCCCEEEEEeCCCCeEEEecCCcCceEEEEC-CCCcccceeecC-CCeEEEEccc-----cEEE
Confidence            45555667888889999899999999999999999998555555444 333477888885 7888888755     4555


Q ss_pred             eCCCCCc-EEEEEcC---CCCCcceEEEeCCCCEEEEEECC-----------CCcEEEEecCCCceEEEecCCCceEEEE
Q psy5751         117 NLDGTDR-EIFLKAA---DLKLPNSLAVDFRTDELCWVDAD-----------SKSLECMTIRNRVRRKVYSNCTYPFGLS  181 (232)
Q Consensus       117 ~~~g~~~-~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~-----------~~~i~~~~~~g~~~~~~~~~~~~p~gla  181 (232)
                      +.+.... +.+....   ....||...++++ |++|+++..           .+++++++++|...+.+...+..|+|||
T Consensus        91 ~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pd-G~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla  169 (307)
T COG3386          91 DPDTGGKITLLAEPEDGLPLNRPNDGVVDPD-GRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLA  169 (307)
T ss_pred             eccCCceeEEeccccCCCCcCCCCceeEcCC-CCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceE
Confidence            5453433 4443321   3678999999998 999999877           3579999997766665555699999999


Q ss_pred             E--ECCEEEEEeCCCCcEEEEeCC---CCCcc--eEEeccCCcceeEEEEEEcCCC
Q psy5751         182 I--TDEKYYWTDWKTNRIESANKE---GERAP--SIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       182 ~--~~~~ly~td~~~~~i~~~~~~---g~~~~--~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      +  ++..||++|+..++|.++..+   +....  ........++.|.|+++..+.|
T Consensus       170 ~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~  225 (307)
T COG3386         170 FSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGN  225 (307)
T ss_pred             ECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCC
Confidence            9  466999999999999999876   32222  2233334578899999998876

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=99.48  E-value=5.9e-11  Score=97.95  Aligned_cols=221  Identities=17%  Similarity=0.164  Sum_probs=145.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCC----------C-CcEEEEEc---CCCc-eeEEEeCCCCCccEEEEeecCCeEEEEeCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVAD----------K-SSIKRAHL---DGKN-VEDVITTNIRSPEGLTFDWVNRVLYWTDSQM   65 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~----------~-~~i~~~~~---~g~~-~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~   65 (232)
                      .|++|++|. +++||+++..+          . .+|.++.-   +|.. ..+++...+..|.||+++. ++ ||+++.. 
T Consensus        15 ~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G-lyV~~~~-   90 (367)
T TIGR02604        15 NPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAV-GG-VYVATPP-   90 (367)
T ss_pred             CCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEec-CC-EEEeCCC-
Confidence            488999998 78999998521          1 17887764   2332 3366777889999999986 44 9998754 


Q ss_pred             CeEEEE-eCCCC-----CCEEEEe---CC----CCCceEEEEeCCCCeEEEEEcCC-----------------CCCcEEE
Q psy5751          66 DTISMA-NLNDD-----QPKVIVS---KD----LVNPRGIVVHPYYRKLFWSDWNR-----------------SGPKIEW  115 (232)
Q Consensus        66 ~~I~~~-~~~g~-----~~~~~~~---~~----~~~p~~iavd~~~~~ly~~d~~~-----------------~~~~I~~  115 (232)
                       .|+++ +.++.     .+++++.   ..    ...+++++++| +|+||++....                 ..+.|++
T Consensus        91 -~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gp-DG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r  168 (367)
T TIGR02604        91 -DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGP-DGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFR  168 (367)
T ss_pred             -eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECC-CCCEEEecccCCCceeccCCCccCcccccCceEEE
Confidence             67766 55543     2344544   11    23478999998 78999987621                 1257999


Q ss_pred             EeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC------------CC---------ceEE-----
Q psy5751         116 SNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR------------NR---------VRRK-----  169 (232)
Q Consensus       116 ~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~------------g~---------~~~~-----  169 (232)
                      ++.++...+++...  +.+|+|+++|+. +.||++|...+...++..-            +.         ....     
T Consensus       169 ~~pdg~~~e~~a~G--~rnp~Gl~~d~~-G~l~~tdn~~~~~~~i~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  245 (367)
T TIGR02604       169 YNPDGGKLRVVAHG--FQNPYGHSVDSW-GDVFFCDNDDPPLCRVTPVAEGGRNGYQSFNGRRYDHADRGADHEVPTGEW  245 (367)
T ss_pred             EecCCCeEEEEecC--cCCCccceECCC-CCEEEEccCCCceeEEcccccccccCCCCCCCccccccccccccccccccc
Confidence            99999888876654  899999999995 8999998865544444321            00         0000     


Q ss_pred             ----------E--ecCCCceEEEEEE---------CCEEEEEeCCCCcEEEEeCC--CCCcce----EEeccCCcceeEE
Q psy5751         170 ----------V--YSNCTYPFGLSIT---------DEKYYWTDWKTNRIESANKE--GERAPS----IALDMMGTTYMYG  222 (232)
Q Consensus       170 ----------~--~~~~~~p~gla~~---------~~~ly~td~~~~~i~~~~~~--g~~~~~----i~~~~~~~~~p~g  222 (232)
                                .  ......|.|+++.         ++.++++++..+.|.++...  |.....    +......-..|..
T Consensus       246 ~~~~~~~~~~~~~~g~~~ap~G~~~y~g~~fp~~~~g~~fv~~~~~~~v~~~~l~~~g~~~~~~~~~~l~~~~~~~rp~d  325 (367)
T TIGR02604       246 RQDDRGVETVGDVAGGGTAPCGIAFYRGDALPEEYRGLLLVGDAHGQLIVRYSLEPKGAGFKGERPEFLRSNDTWFRPVN  325 (367)
T ss_pred             ccccccccccccccCCCccccEEEEeCCCcCCHHHCCCEEeeeccCCEEEEEEeecCCCccEeecCceEecCCCcccccc
Confidence                      0  0012368899875         36899999999999999865  432221    1110011146777


Q ss_pred             EEEEcCCC
Q psy5751         223 IAAVPSSC  230 (232)
Q Consensus       223 i~~~~~~~  230 (232)
                      |++.++++
T Consensus       326 v~~~pDG~  333 (367)
T TIGR02604       326 VTVGPDGA  333 (367)
T ss_pred             eeECCCCC
Confidence            88777653

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=99.44  E-value=5.4e-11  Score=90.70  Aligned_cols=216  Identities=11%  Similarity=0.075  Sum_probs=153.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      |..++-++ ++.+++++...+ .|.+++......++.-...-..|.+|.+++ .+..+++|..+ .|.+++.+....+..
T Consensus        64 p~dvapap-dG~VWft~qg~g-aiGhLdP~tGev~~ypLg~Ga~Phgiv~gp-dg~~Witd~~~-aI~R~dpkt~evt~f  139 (353)
T COG4257          64 PFDVAPAP-DGAVWFTAQGTG-AIGHLDPATGEVETYPLGSGASPHGIVVGP-DGSAWITDTGL-AIGRLDPKTLEVTRF  139 (353)
T ss_pred             ccccccCC-CCceEEecCccc-cceecCCCCCceEEEecCCCCCCceEEECC-CCCeeEecCcc-eeEEecCcccceEEe
Confidence            34455555 778888888888 899998887766555555558999999999 56788899887 899988755543322


Q ss_pred             Ee---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          82 VS---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        82 ~~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                      --   ....+.+...+|+ .|.|+|+....   ---|.+.....+++.-.. +-..|+||++.++ +.+|++....+.|-
T Consensus       140 ~lp~~~a~~nlet~vfD~-~G~lWFt~q~G---~yGrLdPa~~~i~vfpaP-qG~gpyGi~atpd-Gsvwyaslagnaia  213 (353)
T COG4257         140 PLPLEHADANLETAVFDP-WGNLWFTGQIG---AYGRLDPARNVISVFPAP-QGGGPYGICATPD-GSVWYASLAGNAIA  213 (353)
T ss_pred             ecccccCCCcccceeeCC-CccEEEeeccc---cceecCcccCceeeeccC-CCCCCcceEECCC-CcEEEEeccccceE
Confidence            21   2233445677897 89999998642   223555555555555443 3788999999997 89999999899999


Q ss_pred             EEecCCCceEEEec-C--CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         159 CMTIRNRVRRKVYS-N--CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       159 ~~~~~g~~~~~~~~-~--~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ++|+-....+++.. .  -+....+-.+ .++++.|+|.++.+.++++...+.....+|..++ +|+.+-|...
T Consensus       214 ridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~a-rpys~rVD~~  286 (353)
T COG4257         214 RIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKA-RPYSMRVDRH  286 (353)
T ss_pred             EcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCC-CcceeeeccC
Confidence            99887654444422 1  1122333344 7899999999999999999988888777766555 6777776654

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=99.44  E-value=2.4e-11  Score=100.30  Aligned_cols=153  Identities=19%  Similarity=0.228  Sum_probs=114.0

Q ss_pred             CCCCccEEEEeecCCeEEEEeCC-----------C-CeEEEEeC---CCCCC-EEEEeCCCCCceEEEEeCCCCeEEEEE
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQ-----------M-DTISMANL---NDDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSD  105 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~-----------~-~~I~~~~~---~g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d  105 (232)
                      .+..|.+|++|. .++||+++..           . .+|.+++-   +|... ..++.+.+..|.||++.+ ++ ||+++
T Consensus        12 ~~~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G-lyV~~   88 (367)
T TIGR02604        12 LLRNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAV-GG-VYVAT   88 (367)
T ss_pred             ccCCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEec-CC-EEEeC
Confidence            489999999998 5779999842           2 38888753   34432 345556888999999986 66 99987


Q ss_pred             cCCCCCcEEEE-eCCCC-----CcEEEEEcC------CCCCcceEEEeCCCCEEEEEECC-------------------C
Q psy5751         106 WNRSGPKIEWS-NLDGT-----DREIFLKAA------DLKLPNSLAVDFRTDELCWVDAD-------------------S  154 (232)
Q Consensus       106 ~~~~~~~I~~~-~~~g~-----~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~-------------------~  154 (232)
                      .    .+|+++ +.++.     ..++++..-      ....+++++++++ ++||+++..                   .
T Consensus        89 ~----~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpD-G~LYv~~G~~~~~~~~~~~~~~~~~~~~~  163 (367)
T TIGR02604        89 P----PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPD-GWLYFNHGNTLASKVTRPGTSDESRQGLG  163 (367)
T ss_pred             C----CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCC-CCEEEecccCCCceeccCCCccCcccccC
Confidence            3    458876 44442     344555431      0245889999997 899998762                   1


Q ss_pred             CcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         155 KSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      +.|++++++|+..+.++..+..|.|++++ .+.+|++|.......++++
T Consensus       164 g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~~~~~~i~~  212 (367)
T TIGR02604       164 GGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDNDDPPLCRVTP  212 (367)
T ss_pred             ceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEccCCCceeEEcc
Confidence            57999999999888888899999999996 7899999987766666664

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.42  E-value=1.9e-09  Score=85.87  Aligned_cols=216  Identities=10%  Similarity=0.032  Sum_probs=143.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +..+++++.++.+|.+...++ .|..+++........+.. -..+.++++++.++.++.+......+...+..+......
T Consensus        75 ~~~~~~~~~g~~l~~~~~~~~-~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~  152 (300)
T TIGR03866        75 PELFALHPNGKILYIANEDDN-LVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN  152 (300)
T ss_pred             ccEEEECCCCCEEEEEcCCCC-eEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence            346788888888888876667 899999886442222222 245789999987777776665545566667665433222


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------CCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------DLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      .. ....|..+++++.++.||++...  .+.|...++........+...      ....|.++++++++..+|++....+
T Consensus       153 ~~-~~~~~~~~~~s~dg~~l~~~~~~--~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~  229 (300)
T TIGR03866       153 VL-VDQRPRFAEFTADGKELWVSSEI--GGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPAN  229 (300)
T ss_pred             EE-cCCCccEEEECCCCCEEEEEcCC--CCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCC
Confidence            22 23467889999866677766432  456888888754322111100      1235778999999888999877777


Q ss_pred             cEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEE
Q psy5751         156 SLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGER-APSIALDMMGTTYMYGIAAV  226 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~  226 (232)
                      ++..++.+..+..........+.++++  ++.+||.+...++.|..++..+.. .+.+..    ...|.+||+-
T Consensus       230 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~~  299 (300)
T TIGR03866       230 RVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV----GRLPWGVVVR  299 (300)
T ss_pred             eEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc----ccccceeEeC
Confidence            899888876554433333446788888  466888888778899999998544 455643    3688999964

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=99.37  E-value=1.2e-09  Score=88.95  Aligned_cols=222  Identities=20%  Similarity=0.197  Sum_probs=142.6

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe------CCCCCccEEEEee---cCCeEEEEeCCC------
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT------TNIRSPEGLTFDW---VNRVLYWTDSQM------   65 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~------~~~~~p~gl~~d~---~~~~ly~~d~~~------   65 (232)
                      .|.+|++.+ +++||++.. .+ +|+++..+|.....+..      .......||++++   .++.||+.-...      
T Consensus         3 ~P~~~a~~p-dG~l~v~e~-~G-~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~   79 (331)
T PF07995_consen    3 NPRSMAFLP-DGRLLVAER-SG-RIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD   79 (331)
T ss_dssp             SEEEEEEET-TSCEEEEET-TT-EEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred             CceEEEEeC-CCcEEEEeC-Cc-eEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence            489999999 589999987 55 89999977765222221      2346779999998   358899876632      


Q ss_pred             --CeEEEEeCCCCC-----CEEEEe---C---CCCCceEEEEeCCCCeEEEEEcC-----------CCCCcEEEEeCCCC
Q psy5751          66 --DTISMANLNDDQ-----PKVIVS---K---DLVNPRGIVVHPYYRKLFWSDWN-----------RSGPKIEWSNLDGT  121 (232)
Q Consensus        66 --~~I~~~~~~g~~-----~~~~~~---~---~~~~p~~iavd~~~~~ly~~d~~-----------~~~~~I~~~~~~g~  121 (232)
                        .+|.+..++...     .++++.   .   ......+|+++| +|.||++-..           ...++|.|++.+|+
T Consensus        80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgp-DG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~  158 (331)
T PF07995_consen   80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGP-DGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS  158 (331)
T ss_dssp             EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-T-TSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS
T ss_pred             cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCC-CCcEEEEeCCCCCcccccccccccceEEEecccCc
Confidence              478887765541     333433   1   334557899998 7899998532           12689999999987


Q ss_pred             -------------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCc-------------------
Q psy5751         122 -------------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRV-------------------  166 (232)
Q Consensus       122 -------------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~-------------------  166 (232)
                                   ..++....  +.+|.++++|+.++.||.+|.+..   +|.++.. |.+                   
T Consensus       159 ~p~dnP~~~~~~~~~~i~A~G--lRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~-G~nYGWP~~~~~~~~~~~~~~~  235 (331)
T PF07995_consen  159 IPADNPFVGDDGADSEIYAYG--LRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEP-GGNYGWPYCEGGPKYSGPPIGD  235 (331)
T ss_dssp             B-TTSTTTTSTTSTTTEEEE----SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-T-T-B--TTTBSSSCSTTSS-ECT
T ss_pred             CCCCCccccCCCceEEEEEeC--CCccccEEEECCCCcEEEEccCCCCCcEEEEecc-CCcCCCCCCcCCCCCCCCcccc
Confidence                         45565555  899999999999899999997653   3444422 110                   


Q ss_pred             ---------eEEEecCCCceEEEEEE--------CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcc-eeEEEEEEc
Q psy5751         167 ---------RRKVYSNCTYPFGLSIT--------DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTT-YMYGIAAVP  227 (232)
Q Consensus       167 ---------~~~~~~~~~~p~gla~~--------~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~-~p~gi~~~~  227 (232)
                               .......-..|.|+++.        .+.++++++...+|.++..+ +........-..... .|.+|++.+
T Consensus       236 ~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~p  315 (331)
T PF07995_consen  236 APSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGP  315 (331)
T ss_dssp             GSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEET
T ss_pred             ccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcC
Confidence                     00001123558899875        67899999999999999987 322221221123343 789999987


Q ss_pred             CC
Q psy5751         228 SS  229 (232)
Q Consensus       228 ~~  229 (232)
                      ++
T Consensus       316 DG  317 (331)
T PF07995_consen  316 DG  317 (331)
T ss_dssp             TS
T ss_pred             CC
Confidence            74

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG4499|consensus

Probab=99.35  E-value=3e-10  Score=84.82  Aligned_cols=207  Identities=13%  Similarity=0.198  Sum_probs=129.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +|..|+..++.|||.|+..+ .|.|.+.........-.+. ....|+++--.+ -..|.+-.+ .+.-..+.+|......
T Consensus        18 Egp~w~~~~~sLl~VDi~ag-~v~r~D~~qn~v~ra~ie~-p~~ag~ilpv~~~~q~~~v~~G-~kf~i~nwd~~~~~a~   94 (310)
T KOG4499|consen   18 EGPHWDVERQSLLYVDIEAG-EVHRYDIEQNKVYRAKIEG-PPSAGFILPVEGGPQEFAVGCG-SKFVIVNWDGVSESAK   94 (310)
T ss_pred             CCCceEEecceEEEEEeccC-ceehhhhhhhheEEEEEec-CcceeEEEEecCCCceEEEeec-ceEEEEEcccccceee
Confidence            36678999999999999888 7877776654322221111 011223222111 123333222 2444556666543222


Q ss_pred             E-eC--------CCCCceEEEEeCCCCeEEEEEcCCC-------CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCC
Q psy5751          82 V-SK--------DLVNPRGIVVHPYYRKLFWSDWNRS-------GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTD  145 (232)
Q Consensus        82 ~-~~--------~~~~p~~iavd~~~~~ly~~d~~~~-------~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~  145 (232)
                      + .+        .-++.++--+|| +|+.|.-.+...       .+.+++. +.+...+.+...  +.-+|||+.|.+..
T Consensus        95 v~~t~~ev~~d~kknR~NDgkvdP-~Gryy~GtMad~~~~le~~~g~Ly~~-~~~h~v~~i~~~--v~IsNgl~Wd~d~K  170 (310)
T KOG4499|consen   95 VYRTLFEVQPDRKKNRLNDGKVDP-DGRYYGGTMADFGDDLEPIGGELYSW-LAGHQVELIWNC--VGISNGLAWDSDAK  170 (310)
T ss_pred             eeeeccccCchHHhcccccCccCC-CCceeeeeeccccccccccccEEEEe-ccCCCceeeehh--ccCCccccccccCc
Confidence            2 11        123455666888 566676433211       2233333 333344444443  78899999999999


Q ss_pred             EEEEEECCCCcEEEEecC--CC---ceEEEec-------CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751         146 ELCWVDADSKSLECMTIR--NR---VRRKVYS-------NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIA  211 (232)
Q Consensus       146 ~Ly~~d~~~~~i~~~~~~--g~---~~~~~~~-------~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~  211 (232)
                      .+|++|+.+..|...+.|  ++   +++.+..       ....|+|++++ +|+||++-|..++|+++++. |+.+.++.
T Consensus       171 ~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eik  250 (310)
T KOG4499|consen  171 KFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIK  250 (310)
T ss_pred             EEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEE
Confidence            999999999999666644  33   5555532       34568999997 89999999999999999998 77788888


Q ss_pred             eccCC
Q psy5751         212 LDMMG  216 (232)
Q Consensus       212 ~~~~~  216 (232)
                      +|...
T Consensus       251 lPt~q  255 (310)
T KOG4499|consen  251 LPTPQ  255 (310)
T ss_pred             cCCCc
Confidence            87643

>KOG1520|consensus

Probab=99.35  E-value=7.5e-11  Score=94.19  Aligned_cols=146  Identities=12%  Similarity=0.157  Sum_probs=118.3

Q ss_pred             CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC----CceEEEEeCCCCeEEEEEcCC---------
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV----NPRGIVVHPYYRKLFWSDWNR---------  108 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~----~p~~iavd~~~~~ly~~d~~~---------  108 (232)
                      -...|-||+++..++.||++|.-. -++.++.+|...+.+..+...    -.+++.|++ +|.+||||...         
T Consensus       113 ~CGRPLGl~f~~~ggdL~VaDAYl-GL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~-~g~vyFTDSSsk~~~rd~~~  190 (376)
T KOG1520|consen  113 LCGRPLGIRFDKKGGDLYVADAYL-GLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDP-EGVVYFTDSSSKYDRRDFVF  190 (376)
T ss_pred             ccCCcceEEeccCCCeEEEEecce-eeEEECCCCCcceeccccccCeeeeecCceeEcC-CCeEEEeccccccchhheEE
Confidence            357999999999888999999775 488899998886555553333    347899998 99999998642         


Q ss_pred             ------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce---EEEec-CCCceE
Q psy5751         109 ------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR---RKVYS-NCTYPF  178 (232)
Q Consensus       109 ------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~---~~~~~-~~~~p~  178 (232)
                            ..+++++++......++++..  +..|||++++++...+.+|+....+|.+.-+.|.+.   +.+++ ....|+
T Consensus       191 a~l~g~~~GRl~~YD~~tK~~~VLld~--L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PD  268 (376)
T KOG1520|consen  191 AALEGDPTGRLFRYDPSTKVTKVLLDG--LYFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPD  268 (376)
T ss_pred             eeecCCCccceEEecCcccchhhhhhc--ccccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCc
Confidence                  356777777777777777776  999999999999999999999999999999998766   77777 456699


Q ss_pred             EEEEE-CCEEEEEe
Q psy5751         179 GLSIT-DEKYYWTD  191 (232)
Q Consensus       179 gla~~-~~~ly~td  191 (232)
                      .|..+ +|..|++-
T Consensus       269 NIR~~~~G~fWVal  282 (376)
T KOG1520|consen  269 NIRRDSTGHFWVAL  282 (376)
T ss_pred             ceeECCCCCEEEEE
Confidence            99987 66777775

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=99.32  E-value=9.6e-10  Score=84.01  Aligned_cols=205  Identities=13%  Similarity=0.108  Sum_probs=144.6

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe---CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT---TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~---~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      .|++|...+ ++..+++|....  |.|++.+....++.-.   ....+-+...+|. .++|+|+... +.--+.|.-...
T Consensus       105 ~Phgiv~gp-dg~~Witd~~~a--I~R~dpkt~evt~f~lp~~~a~~nlet~vfD~-~G~lWFt~q~-G~yGrLdPa~~~  179 (353)
T COG4257         105 SPHGIVVGP-DGSAWITDTGLA--IGRLDPKTLEVTRFPLPLEHADANLETAVFDP-WGNLWFTGQI-GAYGRLDPARNV  179 (353)
T ss_pred             CCceEEECC-CCCeeEecCcce--eEEecCcccceEEeecccccCCCcccceeeCC-CccEEEeecc-ccceecCcccCc
Confidence            478899998 888888887654  8888876554433322   2234556778898 6778888764 333466666555


Q ss_pred             CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-CCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          78 PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-LKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        78 ~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      .++.-......|.||++.| +|.+|++...  ..-|.+++.-....+++..... -..-..+..|+. ++++.+++++++
T Consensus       180 i~vfpaPqG~gpyGi~atp-dGsvwyasla--gnaiaridp~~~~aev~p~P~~~~~gsRriwsdpi-g~~wittwg~g~  255 (353)
T COG4257         180 ISVFPAPQGGGPYGICATP-DGSVWYASLA--GNAIARIDPFAGHAEVVPQPNALKAGSRRIWSDPI-GRAWITTWGTGS  255 (353)
T ss_pred             eeeeccCCCCCCcceEECC-CCcEEEEecc--ccceEEcccccCCcceecCCCcccccccccccCcc-CcEEEeccCCce
Confidence            5555556777899999998 8999999765  3447777765555555433221 122345677776 899999999999


Q ss_pred             EEEEecCCCceEEE-e-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEecc
Q psy5751         157 LECMTIRNRVRRKV-Y-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDM  214 (232)
Q Consensus       157 i~~~~~~g~~~~~~-~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~  214 (232)
                      ++++++....-... + ..-.+|.++-+| .+++|.+|+..+.|.|+++.....+++..+.
T Consensus       256 l~rfdPs~~sW~eypLPgs~arpys~rVD~~grVW~sea~agai~rfdpeta~ftv~p~pr  316 (353)
T COG4257         256 LHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRVWLSEADAGAIGRFDPETARFTVLPIPR  316 (353)
T ss_pred             eeEeCcccccceeeeCCCCCCCcceeeeccCCcEEeeccccCceeecCcccceEEEecCCC
Confidence            99999986542222 2 245678899997 7999999999999999999988777665443

>KOG1520|consensus

Probab=99.28  E-value=1.9e-10  Score=91.90  Aligned_cols=179  Identities=17%  Similarity=0.121  Sum_probs=130.0

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC----CCE----EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEE
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD----QPK----VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIE  114 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~----~~~----~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~  114 (232)
                      ...+..+.+.. ++.|+|+-...+.+-+++..-.    .+.    .-...--.+|-||+.+..+|.||++|...+   ++
T Consensus        64 ~~~gp~~~v~d-g~il~~~g~~~Gwv~~~~~~~s~~~~~~~~~~~~~~e~~CGRPLGl~f~~~ggdL~VaDAYlG---L~  139 (376)
T KOG1520|consen   64 QGGGPYTGVVD-GRILKYTGNDDGWVKFADTKDSTNRSQCCDPGSFETEPLCGRPLGIRFDKKGGDLYVADAYLG---LL  139 (376)
T ss_pred             cCCCceEEEEC-CceEEEeccCceEEEEEeccccccccccCCCcceecccccCCcceEEeccCCCeEEEEeccee---eE
Confidence            33444455543 6788999888888887776311    111    111123469999999998889999998754   88


Q ss_pred             EEeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEECC-----------------CCcEEEEecCCCceEEEecCC
Q psy5751         115 WSNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDAD-----------------SKSLECMTIRNRVRRKVYSNC  174 (232)
Q Consensus       115 ~~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~-----------------~~~i~~~~~~g~~~~~~~~~~  174 (232)
                      .++.+|...+.+....   .+...|++.|++ ++.+||+|+.                 ++++.+.|+.....+++.+++
T Consensus       140 ~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~-~g~vyFTDSSsk~~~rd~~~a~l~g~~~GRl~~YD~~tK~~~VLld~L  218 (376)
T KOG1520|consen  140 KVGPEGGLAELLADEAEGKPFKFLNDLDIDP-EGVVYFTDSSSKYDRRDFVFAALEGDPTGRLFRYDPSTKVTKVLLDGL  218 (376)
T ss_pred             EECCCCCcceeccccccCeeeeecCceeEcC-CCeEEEeccccccchhheEEeeecCCCccceEEecCcccchhhhhhcc
Confidence            9999988876665543   245679999999 7999999874                 578888888887788889999


Q ss_pred             CceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCCcceEEeccC-CcceeEEEEEE
Q psy5751         175 TYPFGLSI--TDEKYYWTDWKTNRIESANKEGERAPSIALDMM-GTTYMYGIAAV  226 (232)
Q Consensus       175 ~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~-~~~~p~gi~~~  226 (232)
                      .-|+|+++  +++.+.+++....++.+.-..|...-+...-.. -|+.|..|--.
T Consensus       219 ~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~g~k~gt~EvFa~~LPG~PDNIR~~  273 (376)
T KOG1520|consen  219 YFPNGLALSPDGSFVLVAETTTARIKRYWIKGPKAGTSEVFAEGLPGYPDNIRRD  273 (376)
T ss_pred             cccccccCCCCCCEEEEEeeccceeeeeEecCCccCchhhHhhcCCCCCcceeEC
Confidence            99999998  688999999999888888777665522222222 36667666544

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.27  E-value=4.7e-08  Score=77.82  Aligned_cols=196  Identities=13%  Similarity=0.163  Sum_probs=129.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +.++++++..+.+|.+...++ .|..+++.+......+.. ...+..+++++.++.+|.+....+.|...++........
T Consensus        33 ~~~l~~~~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~  110 (300)
T TIGR03866        33 PRGITLSKDGKLLYVCASDSD-TIQVIDLATGEVIGTLPS-GPDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAE  110 (300)
T ss_pred             CCceEECCCCCEEEEEECCCC-eEEEEECCCCcEEEeccC-CCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeE
Confidence            456888887778888887777 899999886543332322 245778899988888998877778899999976443222


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      +. ....|.+++++|.+..++.+...  ...+...+............  -..|..+++++++..||++....+.|..++
T Consensus       111 ~~-~~~~~~~~~~~~dg~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d  185 (300)
T TIGR03866       111 IP-VGVEPEGMAVSPDGKIVVNTSET--TNMAHFIDTKTYEIVDNVLV--DQRPRFAEFTADGKELWVSSEIGGTVSVID  185 (300)
T ss_pred             ee-CCCCcceEEECCCCCEEEEEecC--CCeEEEEeCCCCeEEEEEEc--CCCccEEEECCCCCEEEEEcCCCCEEEEEE
Confidence            22 23468899999855555555432  22345556554333222222  346889999999888888766678899988


Q ss_pred             cCCCce-EEEe-c------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751         162 IRNRVR-RKVY-S------NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       162 ~~g~~~-~~~~-~------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ++..+. +.+. .      ....|.++++.  +..+|++...++++..++...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~  238 (300)
T TIGR03866       186 VATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT  238 (300)
T ss_pred             cCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC
Confidence            886543 2221 1      12246677774  557788877777888888764

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.26  E-value=3.8e-08  Score=77.77  Aligned_cols=204  Identities=16%  Similarity=0.152  Sum_probs=140.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCcee--EEEe-CC--------CCCccEEEEeecCCeEEEEeCCCCeE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVE--DVIT-TN--------IRSPEGLTFDWVNRVLYWTDSQMDTI   68 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~--~~~~-~~--------~~~p~gl~~d~~~~~ly~~d~~~~~I   68 (232)
                      |.-+++|...+.||.++...+ .|.+..++  |.-..  .++. .+        -.++....+++.++.|+..|-+..+|
T Consensus        91 p~yvsvd~~g~~vf~AnY~~g-~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri  169 (346)
T COG2706          91 PCYVSVDEDGRFVFVANYHSG-SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI  169 (346)
T ss_pred             CeEEEECCCCCEEEEEEccCc-eEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence            357889998889999999988 88887775  32211  1111 11        12367778899899999999999999


Q ss_pred             EEEeCCCCCCEEEE---eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEc----CCC---CCcc
Q psy5751          69 SMANLNDDQPKVIV---SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKA----ADL---KLPN  136 (232)
Q Consensus        69 ~~~~~~g~~~~~~~---~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~----~~~---~~p~  136 (232)
                      +.++++........   -.....|+-|+++|..+..|+..--  .+.|.....+..  ..+.+...    .++   .+-.
T Consensus       170 ~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL--~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~a  247 (346)
T COG2706         170 FLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNEL--NSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAA  247 (346)
T ss_pred             EEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEecc--CCEEEEEEEcCCCceEEEeeeeccCccccCCCCcee
Confidence            99988744321111   1567789999999988888876532  456777777663  22222111    012   3446


Q ss_pred             eEEEeCCCCEEEEEECCCCcEEEEecC--CCceEEEe---cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751         137 SLAVDFRTDELCWVDADSKSLECMTIR--NRVRRKVY---SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAP  208 (232)
Q Consensus       137 ~l~~d~~~~~Ly~~d~~~~~i~~~~~~--g~~~~~~~---~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~  208 (232)
                      .|.+++++..||.++.+.+.|..+.++  |+..+.+.   ...+.|..+.+.  ++.|+.++-.+..|.++..+.+..+
T Consensus       248 aIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~  326 (346)
T COG2706         248 AIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGR  326 (346)
T ss_pred             EEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCce
Confidence            889999999999999998877776555  55444442   255668888874  7889999888887777777644444

>KOG4659|consensus

Probab=99.24  E-value=2.9e-10  Score=101.69  Aligned_cols=190  Identities=21%  Similarity=0.289  Sum_probs=132.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEc-CCC----ceeEEEe--------------------CCCCCccEEEEeecCCe
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHL-DGK----NVEDVIT--------------------TNIRSPEGLTFDWVNRV   57 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~-~g~----~~~~~~~--------------------~~~~~p~gl~~d~~~~~   57 (232)
                      .-+++++.++.||++|-..+ +|+|+.- .+.    +.+.+..                    ..+..|.||++|. .++
T Consensus       410 Yy~AvsPvdgtlyvSdp~s~-qv~rv~sl~~~d~~~N~evvaG~Ge~Clp~desCGDGalA~dA~L~~PkGIa~dk-~g~  487 (1899)
T KOG4659|consen  410 YYIAVSPVDGTLYVSDPLSK-QVWRVSSLEPQDSRNNYEVVAGDGEVCLPADESCGDGALAQDAQLIFPKGIAFDK-MGN  487 (1899)
T ss_pred             eEEEecCcCceEEecCCCcc-eEEEeccCCccccccCeeEEeccCcCccccccccCcchhcccceeccCCceeEcc-CCc
Confidence            35889999999999999999 8888652 221    1222211                    1256899999998 688


Q ss_pred             EEEEeCCCCeEEEEeCCCCCCEEEEe------------------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751          58 LYWTDSQMDTISMANLNDDQPKVIVS------------------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD  119 (232)
Q Consensus        58 ly~~d~~~~~I~~~~~~g~~~~~~~~------------------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~  119 (232)
                      |||+|..  +|.++|.+|-....+-+                  -.+..|.++|++|.++.||+.|    .+.|.++..+
T Consensus       488 lYfaD~t--~IR~iD~~giIstlig~~~~~~~p~~C~~~~kl~~~~leWPT~LaV~Pmdnsl~Vld----~nvvlrit~~  561 (1899)
T KOG4659|consen  488 LYFADGT--RIRVIDTTGIISTLIGTTPDQHPPRTCAQITKLVDLQLEWPTSLAVDPMDNSLLVLD----TNVVLRITVV  561 (1899)
T ss_pred             EEEeccc--EEEEeccCceEEEeccCCCCccCccccccccchhheeeecccceeecCCCCeEEEee----cceEEEEccC
Confidence            9999986  68888877643222211                  1477899999999999999999    4457787776


Q ss_pred             CCCcEEEEEcC-------------------CCCCcceEEEeCCCCEEEEEECCCCcEEE---EecCCCceEEEe------
Q psy5751         120 GTDREIFLKAA-------------------DLKLPNSLAVDFRTDELCWVDADSKSLEC---MTIRNRVRRKVY------  171 (232)
Q Consensus       120 g~~~~~~~~~~-------------------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~---~~~~g~~~~~~~------  171 (232)
                      +..+ ++...+                   .+..+.+|++.++ |.||++++...+|-+   +..||. .-.++      
T Consensus       562 ~rV~-Ii~GrP~hC~~a~~t~~~skla~H~tl~~~r~Iavg~~-G~lyvaEsD~rriNrvr~~~tdg~-i~ilaGa~S~C  638 (1899)
T KOG4659|consen  562 HRVR-IILGRPTHCDLANATSSASKLADHRTLLIQRDIAVGTD-GALYVAESDGRRINRVRKLSTDGT-ISILAGAKSPC  638 (1899)
T ss_pred             ccEE-EEcCCccccccCCCchhhhhhhhhhhhhhhhceeecCC-ceEEEEeccchhhhheEEeccCce-EEEecCCCCCC
Confidence            5543 111111                   1445789999997 999999987654444   434431 11111      


Q ss_pred             --------------------cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         172 --------------------SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       172 --------------------~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                                          ..+..|.++|+. ++.+|++|.++-+|..+...
T Consensus       639 ~C~~~~~cdcfs~~~~~At~A~lnsp~alaVsPdg~v~IAD~gN~rIr~Vs~~  691 (1899)
T KOG4659|consen  639 SCDVAACCDCFSLRDVAATQAKLNSPYALAVSPDGDVIIADSGNSRIRKVSAR  691 (1899)
T ss_pred             CcccccCCccccccchhhhccccCCcceEEECCCCcEEEecCCchhhhhhhhc
Confidence                                136779999995 89999999999888777643

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.19  E-value=1.2e-07  Score=74.95  Aligned_cols=225  Identities=11%  Similarity=0.093  Sum_probs=145.6

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCC--ceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC--
Q psy5751           1 MLIGITVDCVEGQVYYSSVADK-SSIKRAHLDGK--NVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL--   73 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~--~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~--   73 (232)
                      +|.-+++++....||..+..++ +.|..+.++..  ..+.+-.  ..-..|.-+++|+.++.||.+.+..+.|.+..+  
T Consensus        41 nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~  120 (346)
T COG2706          41 NPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQA  120 (346)
T ss_pred             CCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEccc
Confidence            4677899998899999987732 37887777753  3322221  123566899999999999999999998888765  


Q ss_pred             CCCCCEE--EEe--CC-------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE--EcCCCCCcceEEE
Q psy5751          74 NDDQPKV--IVS--KD-------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL--KAADLKLPNSLAV  140 (232)
Q Consensus        74 ~g~~~~~--~~~--~~-------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~--~~~~~~~p~~l~~  140 (232)
                      +|....+  ++.  ..       -.++...-++|.++.|+.+|.+.+  +|..++++-...+...  .-.....|..|+|
T Consensus       121 dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D--ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~F  198 (346)
T COG2706         121 DGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD--RIFLYDLDDGKLTPADPAEVKPGAGPRHIVF  198 (346)
T ss_pred             CCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc--eEEEEEcccCccccccccccCCCCCcceEEE
Confidence            4543222  221  11       122556678888889999999855  5776666533222111  1122678999999


Q ss_pred             eCCCCEEEEEECCCCcEEEEecCCC--ceEEEec------CCCceE---EEEE--ECCEEEEEeCCCCcEEEE--eCCCC
Q psy5751         141 DFRTDELCWVDADSKSLECMTIRNR--VRRKVYS------NCTYPF---GLSI--TDEKYYWTDWKTNRIESA--NKEGE  205 (232)
Q Consensus       141 d~~~~~Ly~~d~~~~~i~~~~~~g~--~~~~~~~------~~~~p~---gla~--~~~~ly~td~~~~~i~~~--~~~g~  205 (232)
                      ++..+..|+...-+++|....+++.  +.+.+..      .+....   .|.+  ++.+||.++-+.+.|..+  +++|+
T Consensus       199 Hpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g  278 (346)
T COG2706         199 HPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGG  278 (346)
T ss_pred             cCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCC
Confidence            9999999999998999999988863  3333322      222222   2333  477899999887766555  45566


Q ss_pred             CcceEEeccCCcceeEEEEEEc
Q psy5751         206 RAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       206 ~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      .+..+....-.-..|.+-.+.+
T Consensus       279 ~L~~~~~~~teg~~PR~F~i~~  300 (346)
T COG2706         279 KLELVGITPTEGQFPRDFNINP  300 (346)
T ss_pred             EEEEEEEeccCCcCCccceeCC
Confidence            6665544333333455544433

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=99.17  E-value=9.8e-08  Score=76.01  Aligned_cols=188  Identities=14%  Similarity=0.134  Sum_probs=124.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCC---------C--CcEEEEEcCCCceeEEE-e-C----CCCCccEEEEeecC-----CeEE
Q psy5751           2 LIGITVDCVEGQVYYSSVAD---------K--SSIKRAHLDGKNVEDVI-T-T----NIRSPEGLTFDWVN-----RVLY   59 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~---------~--~~i~~~~~~g~~~~~~~-~-~----~~~~p~gl~~d~~~-----~~ly   59 (232)
                      +.++.+|. .++||+.|.+.         .  ++|..+++.....-+.+ . .    .......+++|...     +.+|
T Consensus         3 V~~v~iD~-~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aY   81 (287)
T PF03022_consen    3 VQRVQIDE-CGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAY   81 (287)
T ss_dssp             EEEEEE-T-TSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEE
T ss_pred             ccEEEEcC-CCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEE
Confidence            57889997 99999999763         1  48999999976542222 1 1    22455779999744     5899


Q ss_pred             EEeCCCCeEEEEeCCCCCCEEEEe-C------------------CCCCceEEEEeC---CCCeEEEEEcCCCCCcEEEEe
Q psy5751          60 WTDSQMDTISMANLNDDQPKVIVS-K------------------DLVNPRGIVVHP---YYRKLFWSDWNRSGPKIEWSN  117 (232)
Q Consensus        60 ~~d~~~~~I~~~~~~g~~~~~~~~-~------------------~~~~p~~iavd~---~~~~ly~~d~~~~~~~I~~~~  117 (232)
                      ++|.....|.++|+.......+.. .                  ......|+++.+   .++.|||....  ..+++++.
T Consensus        82 ItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~ls--s~~ly~v~  159 (287)
T PF03022_consen   82 ITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLS--SRKLYRVP  159 (287)
T ss_dssp             EEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT---SEEEEEE
T ss_pred             EeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCC--CCcEEEEE
Confidence            999999999999987754332222 1                  122356788866   45689999876  34677776


Q ss_pred             C----CCC---------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC----CceEEEec--C-CCce
Q psy5751         118 L----DGT---------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN----RVRRKVYS--N-CTYP  177 (232)
Q Consensus       118 ~----~g~---------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g----~~~~~~~~--~-~~~p  177 (232)
                      .    +..         ..+.+...  ..+..|+++|+ +|.||+++...+.|.+.+.++    .+.+++++  . +.+|
T Consensus       160 T~~L~~~~~~~~~~~~~~v~~lG~k--~~~s~g~~~D~-~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~p  236 (287)
T PF03022_consen  160 TSVLRDPSLSDAQALASQVQDLGDK--GSQSDGMAIDP-NGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWP  236 (287)
T ss_dssp             HHHHCSTT--HHH-HHHT-EEEEE-----SECEEEEET-TTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSE
T ss_pred             HHHhhCccccccccccccceecccc--CCCCceEEECC-CCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeecc
Confidence            3    111         12333222  34678999999 599999999999999999998    45556654  4 8899


Q ss_pred             EEEEEEC---CEEEEEeCCCC
Q psy5751         178 FGLSITD---EKYYWTDWKTN  195 (232)
Q Consensus       178 ~gla~~~---~~ly~td~~~~  195 (232)
                      .+++++.   +.||+...+-.
T Consensus       237 d~~~i~~~~~g~L~v~snrl~  257 (287)
T PF03022_consen  237 DGLKIDPEGDGYLWVLSNRLQ  257 (287)
T ss_dssp             EEEEE-T--TS-EEEEE-S--
T ss_pred             ceeeeccccCceEEEEECcch
Confidence            9999976   99999875433

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.15  E-value=9.7e-08  Score=77.56  Aligned_cols=198  Identities=12%  Similarity=0.118  Sum_probs=120.0

Q ss_pred             eEEEEEeCCCCEEEEEEcC-CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVA-DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~-~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |..+++++.+.+||++|.. .. .+.++++.....-..+... ..+..+.....+..+.|.|   ++...+.++......
T Consensus       107 ~~~~~ls~dgk~l~V~n~~p~~-~V~VvD~~~~kvv~ei~vp-~~~~vy~t~e~~~~~~~~D---g~~~~v~~d~~g~~~  181 (352)
T TIGR02658       107 PWMTSLTPDNKTLLFYQFSPSP-AVGVVDLEGKAFVRMMDVP-DCYHIFPTANDTFFMHCRD---GSLAKVGYGTKGNPK  181 (352)
T ss_pred             cceEEECCCCCEEEEecCCCCC-EEEEEECCCCcEEEEEeCC-CCcEEEEecCCccEEEeec---CceEEEEecCCCceE
Confidence            4478999988999999988 66 8999999976643333221 1222223333233333333   233333332222111


Q ss_pred             EEeCC---------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-----cC---CCCCcce---EEE
Q psy5751          81 IVSKD---------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-----AA---DLKLPNS---LAV  140 (232)
Q Consensus        81 ~~~~~---------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-----~~---~~~~p~~---l~~  140 (232)
                      ..+..         +.+|   .+.+.+|..+|....   +.|+.+++.+........     ..   .-..|.|   +++
T Consensus       182 ~~~~~vf~~~~~~v~~rP---~~~~~dg~~~~vs~e---G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~  255 (352)
T TIGR02658       182 IKPTEVFHPEDEYLINHP---AYSNKSGRLVWPTYT---GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAY  255 (352)
T ss_pred             EeeeeeecCCccccccCC---ceEcCCCcEEEEecC---CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEE
Confidence            11111         2455   334424445554432   679999876654332211     10   1235666   999


Q ss_pred             eCCCCEEEEEEC---------CCCcEEEEecCCCceEEEecCCCceEEEEE--ECC-EEEEEeCCCCcEEEEeCC-CCCc
Q psy5751         141 DFRTDELCWVDA---------DSKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDE-KYYWTDWKTNRIESANKE-GERA  207 (232)
Q Consensus       141 d~~~~~Ly~~d~---------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~-~ly~td~~~~~i~~~~~~-g~~~  207 (232)
                      ++++++||++..         ..++|+.+|....++..-..-...|+++++  ++. +||+++..++.|..++.. ++..
T Consensus       256 ~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i  335 (352)
T TIGR02658       256 HRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL  335 (352)
T ss_pred             cCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence            999999999642         236899999887766554555678999998  467 899999999999999976 4455


Q ss_pred             ceE
Q psy5751         208 PSI  210 (232)
Q Consensus       208 ~~i  210 (232)
                      +.+
T Consensus       336 ~~i  338 (352)
T TIGR02658       336 SSV  338 (352)
T ss_pred             eee
Confidence            555

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.14  E-value=8.1e-08  Score=81.44  Aligned_cols=204  Identities=10%  Similarity=0.034  Sum_probs=133.4

Q ss_pred             EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEE
Q psy5751           4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKV   80 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~   80 (232)
                      +..|++..++|+|+...++ +.|+.+++.+...+.+... -......++.+.++.|+++....  ..|+++++++...+.
T Consensus       222 ~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~-~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~  300 (448)
T PRK04792        222 SPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSF-PGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTR  300 (448)
T ss_pred             CceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCC-CCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE
Confidence            4678888888888755433 4799999987665444321 12234577888888888764333  469999998876655


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~  158 (232)
                      +.. ........+.+|.++.|+++....+..+|+++++++...+.+...  .....+.+++++++.||++....  .+|+
T Consensus       301 lt~-~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~--g~~~~~~~~SpDG~~l~~~~~~~g~~~I~  377 (448)
T PRK04792        301 ITR-HRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFE--GEQNLGGSITPDGRSMIMVNRTNGKFNIA  377 (448)
T ss_pred             Ccc-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecC--CCCCcCeeECCCCCEEEEEEecCCceEEE
Confidence            543 223345667888778888876544467899999987765554332  22334568999989999986543  3789


Q ss_pred             EEecCCCceEEEecC-C-CceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceEEe
Q psy5751         159 CMTIRNRVRRKVYSN-C-TYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSIAL  212 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~-~-~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~  212 (232)
                      .++++++..+.+... . ..| ..+-++..|+++....  ..++.++.+|...+.+..
T Consensus       378 ~~dl~~g~~~~lt~~~~d~~p-s~spdG~~I~~~~~~~g~~~l~~~~~~G~~~~~l~~  434 (448)
T PRK04792        378 RQDLETGAMQVLTSTRLDESP-SVAPNGTMVIYSTTYQGKQVLAAVSIDGRFKARLPA  434 (448)
T ss_pred             EEECCCCCeEEccCCCCCCCc-eECCCCCEEEEEEecCCceEEEEEECCCCceEECcC
Confidence            999998776655432 1 122 2333566777764433  347888888877665543

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=99.08  E-value=3.1e-07  Score=71.17  Aligned_cols=184  Identities=16%  Similarity=0.076  Sum_probs=114.3

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC--C
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD--G  120 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~--g  120 (232)
                      ...+.||++++.++.||.+......|+..+++|...+.+--....++.|+++-- ++.+..++-.  .++++.+..+  +
T Consensus        21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g-~~~~vl~~Er--~~~L~~~~~~~~~   97 (248)
T PF06977_consen   21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLG-NGRYVLSEER--DQRLYIFTIDDDT   97 (248)
T ss_dssp             -S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-S-TTEEEEEETT--TTEEEEEEE----
T ss_pred             cCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEEC-CCEEEEEEcC--CCcEEEEEEeccc
Confidence            356999999998999999888889999999998776655445788999999973 5655555532  4567776663  2


Q ss_pred             CCcEE-----EEEcC---CCCCcceEEEeCCCCEEEEEECCCC-cEEEEec--CCCceEEEec--------CCCceEEEE
Q psy5751         121 TDREI-----FLKAA---DLKLPNSLAVDFRTDELCWVDADSK-SLECMTI--RNRVRRKVYS--------NCTYPFGLS  181 (232)
Q Consensus       121 ~~~~~-----~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~~~~~--~g~~~~~~~~--------~~~~p~gla  181 (232)
                      .....     +-...   .-...-||+.|+.+++||++..... .|+.++.  .+........        ....|.+++
T Consensus        98 ~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~  177 (248)
T PF06977_consen   98 TSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLS  177 (248)
T ss_dssp             TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEE
T ss_pred             cccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceE
Confidence            22111     11110   0123469999999999999976655 5777776  2222222211        345688999


Q ss_pred             EE--CCEEEEEeCCCCcEEEEeCCCCCcceEEecc------CCcceeEEEEEEcCC
Q psy5751         182 IT--DEKYYWTDWKTNRIESANKEGERAPSIALDM------MGTTYMYGIAAVPSS  229 (232)
Q Consensus       182 ~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~------~~~~~p~gi~~~~~~  229 (232)
                      ++  .+.||+....+++|..++.+|.....+.+..      .....|=|||+.+++
T Consensus       178 ~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G  233 (248)
T PF06977_consen  178 YDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDG  233 (248)
T ss_dssp             EETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT-
T ss_pred             EcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCC
Confidence            97  6799999999999999999999888777654      224579999998764

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.05  E-value=2.6e-07  Score=71.60  Aligned_cols=197  Identities=13%  Similarity=0.127  Sum_probs=136.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC----
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP----   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----   78 (232)
                      .+++|+++++.||.+--... .|..+.++|.-..++-...+..|++|++-. ++..-++|....+++...++-...    
T Consensus        89 S~LTynp~~rtLFav~n~p~-~iVElt~~GdlirtiPL~g~~DpE~Ieyig-~n~fvi~dER~~~l~~~~vd~~t~~~~~  166 (316)
T COG3204          89 SSLTYNPDTRTLFAVTNKPA-AIVELTKEGDLIRTIPLTGFSDPETIEYIG-GNQFVIVDERDRALYLFTVDADTTVISA  166 (316)
T ss_pred             cceeeCCCcceEEEecCCCc-eEEEEecCCceEEEecccccCChhHeEEec-CCEEEEEehhcceEEEEEEcCCccEEec
Confidence            58999999999997643434 899999999877777777889999999885 333334777777877765544321    


Q ss_pred             ---EEEEe---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-------CCCCcceEEEeCCCC
Q psy5751          79 ---KVIVS---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-------DLKLPNSLAVDFRTD  145 (232)
Q Consensus        79 ---~~~~~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-------~~~~p~~l~~d~~~~  145 (232)
                         +.-+.   .....-.|+|.|+.++.||++--. .+-.|+...........-....       .+..-+|+.+|+.++
T Consensus       167 ~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr-~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~  245 (316)
T COG3204         167 KVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKER-NPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITN  245 (316)
T ss_pred             cceEEeccccCCCCcCceeeecCCCCceEEEEEcc-CCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCC
Confidence               11122   123455799999999999988644 3456776664432222111110       134568999999999


Q ss_pred             EEEEEECCCCcEEEEecCCCceEEE-e--------cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         146 ELCWVDADSKSLECMTIRNRVRRKV-Y--------SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       146 ~Ly~~d~~~~~i~~~~~~g~~~~~~-~--------~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      .|++-....+.+..++.+|.-+..+ +        +..+.+.|+|++ +|.||++--- +..+++.++
T Consensus       246 ~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvSEP-nlfy~F~~~  312 (316)
T COG3204         246 SLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVSEP-NLFYRFTPQ  312 (316)
T ss_pred             cEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEecC-CcceecccC
Confidence            9999888888899999998754433 2        146778999996 8899988653 456777776

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=99.04  E-value=2e-08  Score=81.72  Aligned_cols=156  Identities=13%  Similarity=0.126  Sum_probs=105.8

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe------CCCCCceEEEEeC---CCCeEEEEEcCC-----
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS------KDLVNPRGIVVHP---YYRKLFWSDWNR-----  108 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------~~~~~p~~iavd~---~~~~ly~~d~~~-----  108 (232)
                      ++.|.+|++.+. +.+|+++. .++|++++.+|.....+..      .....+.++|++|   .++.||++....     
T Consensus         1 L~~P~~~a~~pd-G~l~v~e~-~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~   78 (331)
T PF07995_consen    1 LNNPRSMAFLPD-GRLLVAER-SGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG   78 (331)
T ss_dssp             ESSEEEEEEETT-SCEEEEET-TTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred             CCCceEEEEeCC-CcEEEEeC-CceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence            368999999995 78999998 7999999977776333332      2344668999998   358999876521     


Q ss_pred             -CCCcEEEEeCCCC-----CcEEEEEc-C----CCCCcceEEEeCCCCEEEEEEC-------------CCCcEEEEecCC
Q psy5751         109 -SGPKIEWSNLDGT-----DREIFLKA-A----DLKLPNSLAVDFRTDELCWVDA-------------DSKSLECMTIRN  164 (232)
Q Consensus       109 -~~~~I~~~~~~g~-----~~~~~~~~-~----~~~~p~~l~~d~~~~~Ly~~d~-------------~~~~i~~~~~~g  164 (232)
                       ...+|.|..++..     ..++++.. .    ..+.-..|+|+++ ++||++-.             ..++|.|++.+|
T Consensus        79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpD-G~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG  157 (331)
T PF07995_consen   79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPD-GKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDG  157 (331)
T ss_dssp             SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TT-SEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTS
T ss_pred             CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCC-CcEEEEeCCCCCcccccccccccceEEEecccC
Confidence             1246787777654     12333322 1    1345568999997 69999932             257899999998


Q ss_pred             C-------------ceEEEecCCCceEEEEEE-C-CEEEEEeCCCC---cEEEEe
Q psy5751         165 R-------------VRRKVYSNCTYPFGLSIT-D-EKYYWTDWKTN---RIESAN  201 (232)
Q Consensus       165 ~-------------~~~~~~~~~~~p~gla~~-~-~~ly~td~~~~---~i~~~~  201 (232)
                      .             ..++++..+..|.+++++ . +.||.+|.+..   +|.++.
T Consensus       158 ~~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~  212 (331)
T PF07995_consen  158 SIPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIE  212 (331)
T ss_dssp             SB-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-
T ss_pred             cCCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEec
Confidence            6             567778899999999998 4 89999997654   444444

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.02  E-value=9.8e-07  Score=74.73  Aligned_cols=204  Identities=12%  Similarity=0.062  Sum_probs=133.5

Q ss_pred             EEEEEeCCCCEEEEEEcCC-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVAD-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~   79 (232)
                      ....|.+..+.|+++.... .+.|+..++.+...+.+... .....+.++.+.++.|+++-..  +..|+.+++++....
T Consensus       205 ~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~-~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~  283 (435)
T PRK05137        205 LTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNF-PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT  283 (435)
T ss_pred             EeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecC-CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE
Confidence            4577888888887765433 24899999987665444322 1233566788878888776443  356999999887765


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSL  157 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i  157 (232)
                      .+.. ........+.+|..+.|+++....+..+|+++++++...+.+....  ..-....++++++.|+++....  .+|
T Consensus       284 ~Lt~-~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~--~~~~~~~~SpdG~~ia~~~~~~~~~~i  360 (435)
T PRK05137        284 RLTD-SPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGG--GRYSTPVWSPRGDLIAFTKQGGGQFSI  360 (435)
T ss_pred             EccC-CCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCC--CcccCeEECCCCCEEEEEEcCCCceEE
Confidence            5543 2223345678887777877654434568999999988776665432  2234577899989998876433  478


Q ss_pred             EEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC-----CcEEEEeCCCCCcceEE
Q psy5751         158 ECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT-----NRIESANKEGERAPSIA  211 (232)
Q Consensus       158 ~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~-----~~i~~~~~~g~~~~~i~  211 (232)
                      +.++++++..+.+.... .....++  ++..|+++-...     ..++.++.+|...+.+.
T Consensus       361 ~~~d~~~~~~~~lt~~~-~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~~l~  420 (435)
T PRK05137        361 GVMKPDGSGERILTSGF-LVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNEREVP  420 (435)
T ss_pred             EEEECCCCceEeccCCC-CCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCceEEcc
Confidence            99999887665553321 2334455  456777764322     36899999887766554

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.00  E-value=6.6e-07  Score=75.69  Aligned_cols=203  Identities=13%  Similarity=0.078  Sum_probs=131.4

Q ss_pred             EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEE
Q psy5751           4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKV   80 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~   80 (232)
                      +..|.+.++.|+++....+ +.|+++++++...+.+.... .....+++.+.++.|+++-..  +..|+++++++...+.
T Consensus       208 ~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~-g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~  286 (433)
T PRK04922        208 SPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFR-GINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR  286 (433)
T ss_pred             cccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCC-CCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE
Confidence            4567887888888765433 47999999876654443221 223456788878888776433  3479999998876555


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~  158 (232)
                      +.. ........+.+|.++.|+++....+..+|+.+++++...+.+...  .......+++++++.|+++....  .+|+
T Consensus       287 lt~-~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~--g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~  363 (433)
T PRK04922        287 LTN-HFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQ--GNYNARASVSPDGKKIAMVHGSGGQYRIA  363 (433)
T ss_pred             Ccc-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecC--CCCccCEEECCCCCEEEEEECCCCceeEE
Confidence            443 222334577888777788775433356799999987765554432  23345689999999999886433  3689


Q ss_pred             EEecCCCceEEEecCCCceEEEEE--ECCEEEEEeC--CCCcEEEEeCCCCCcceEE
Q psy5751         159 CMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDW--KTNRIESANKEGERAPSIA  211 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~--~~~~i~~~~~~g~~~~~i~  211 (232)
                      .++++++..+.+... ......++  ++..|+++..  +...|+.++.+|...+.+.
T Consensus       364 v~d~~~g~~~~Lt~~-~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l~  419 (433)
T PRK04922        364 VMDLSTGSVRTLTPG-SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQRLV  419 (433)
T ss_pred             EEECCCCCeEECCCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEcc
Confidence            999987766644332 12223345  4556666533  3457889999887766554

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.98  E-value=1.7e-06  Score=73.05  Aligned_cols=204  Identities=11%  Similarity=0.036  Sum_probs=129.7

Q ss_pred             EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEE
Q psy5751           4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKV   80 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~   80 (232)
                      +..|.+..+.|+++...++ +.|+..++++.....+.... ......++.+.++.|+++-..  ...|+.+++++...+.
T Consensus       200 ~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~-g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~  278 (427)
T PRK02889        200 SPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFK-GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRR  278 (427)
T ss_pred             cceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCC-CCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEE
Confidence            5678888888877765433 47999999876654443221 234567888888888876433  3579999998876655


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~  158 (232)
                      +.. ........+.+|.+..|+++....+..+|+.+++++...+.+...  .......+++++++.|+++....  .+|+
T Consensus       279 lt~-~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~--g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~  355 (427)
T PRK02889        279 LTQ-SSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFT--GSYNTSPRISPDGKLLAYISRVGGAFKLY  355 (427)
T ss_pred             CCC-CCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecC--CCCcCceEECCCCCEEEEEEccCCcEEEE
Confidence            543 222234567888777787765433456899999887765554432  22233568899988998876543  3789


Q ss_pred             EEecCCCceEEEecCCCceEEEEE--ECCEEEEEe-CC-CCcEEEEeCCCCCcceEEe
Q psy5751         159 CMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTD-WK-TNRIESANKEGERAPSIAL  212 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td-~~-~~~i~~~~~~g~~~~~i~~  212 (232)
                      .++++++..+.+.+. ......++  ++..|+++- .+ ...++.++.+|...+.+..
T Consensus       356 v~d~~~g~~~~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~~l~~  412 (427)
T PRK02889        356 VQDLATGQVTALTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQRLSV  412 (427)
T ss_pred             EEECCCCCeEEccCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECCCCceEEeec
Confidence            999987766655432 11233345  455666653 32 2357788888776665543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.97  E-value=1.5e-06  Score=73.40  Aligned_cols=204  Identities=12%  Similarity=0.057  Sum_probs=131.5

Q ss_pred             EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~   79 (232)
                      ....|++..+.|+++...++ +.|+++++++...+.+.... ......++.+.++.|+++-..  ...|+++++++...+
T Consensus       202 ~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~-g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~  280 (430)
T PRK00178        202 LSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFE-GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS  280 (430)
T ss_pred             eeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCC-CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE
Confidence            45678888888877654433 47999999876654443221 223356777778888876533  347999999987765


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSL  157 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i  157 (232)
                      .+.. ........+.+|.++.|+++....+..+|+++++++...+.+...  .......+++++++.|+++....  ..|
T Consensus       281 ~lt~-~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~--~~~~~~~~~Spdg~~i~~~~~~~~~~~l  357 (430)
T PRK00178        281 RVTN-HPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV--GNYNARPRLSADGKTLVMVHRQDGNFHV  357 (430)
T ss_pred             Eccc-CCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC--CCCccceEECCCCCEEEEEEccCCceEE
Confidence            5543 222334556788778888876443456899999987765554432  22334567899989999987543  368


Q ss_pred             EEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCC--CCcEEEEeCCCCCcceEE
Q psy5751         158 ECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWK--TNRIESANKEGERAPSIA  211 (232)
Q Consensus       158 ~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~--~~~i~~~~~~g~~~~~i~  211 (232)
                      +.++++++..+.+... .......+  ++..++++...  ...++.++.+|...+.+.
T Consensus       358 ~~~dl~tg~~~~lt~~-~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~~~l~  414 (430)
T PRK00178        358 AAQDLQRGSVRILTDT-SLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVRLPLP  414 (430)
T ss_pred             EEEECCCCCEEEccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECc
Confidence            8999988776665432 11112234  56677777543  346888888877655443

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.96  E-value=2.3e-06  Score=71.87  Aligned_cols=203  Identities=11%  Similarity=0.027  Sum_probs=132.7

Q ss_pred             EEEEEeCCCCE-EEEEEcCC-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCC
Q psy5751           3 IGITVDCVEGQ-VYYSSVAD-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQP   78 (232)
Q Consensus         3 ~~i~~d~~~~~-ly~~d~~~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~   78 (232)
                      ....|.+..++ +|++.... .+.|+.+++.+...+.+.... ......++.+.++.|.++...  +..|+.+++++...
T Consensus       191 ~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~-g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~  269 (419)
T PRK04043        191 IFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQ-GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL  269 (419)
T ss_pred             EeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCC-CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE
Confidence            35678887775 77766653 358999999877765554321 122234566667778776543  36799999988876


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC----
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS----  154 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~----  154 (232)
                      +.+..... .-......|.++.||++....+..+|+++++++...+.+.... ...   ..++++++.|.++....    
T Consensus       270 ~~LT~~~~-~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g-~~~---~~~SPDG~~Ia~~~~~~~~~~  344 (419)
T PRK04043        270 TQITNYPG-IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHG-KNN---SSVSTYKNYIVYSSRETNNEF  344 (419)
T ss_pred             EEcccCCC-ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCC-CcC---ceECCCCCEEEEEEcCCCccc
Confidence            65554221 1123468887888999876656678999999988775554432 222   38899988888775432    


Q ss_pred             ----CcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeC--CCCcEEEEeCCCCCcceEEe
Q psy5751         155 ----KSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDW--KTNRIESANKEGERAPSIAL  212 (232)
Q Consensus       155 ----~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~--~~~~i~~~~~~g~~~~~i~~  212 (232)
                          .+|+.++++++..+.+.... .-....+  ++..|+++..  +...+..++.+|.....+..
T Consensus       345 ~~~~~~I~v~d~~~g~~~~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l~~  409 (419)
T PRK04043        345 GKNTFNLYLISTNSDYIRRLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLFPL  409 (419)
T ss_pred             CCCCcEEEEEECCCCCeEECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeEEeec
Confidence                48999999988776664421 1112334  4666766643  23458899999877665544

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.95  E-value=3.1e-06  Score=71.50  Aligned_cols=204  Identities=11%  Similarity=0.069  Sum_probs=133.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~   79 (232)
                      .+..|++..+.|.++....+ +.|+..++++...+.+... ......+++.+.++.|+++...  ...|+.+++++...+
T Consensus       202 ~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~-~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~  280 (429)
T PRK03629        202 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR  280 (429)
T ss_pred             eeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCC-CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE
Confidence            36788888888876654322 4799999987665444322 1234467888888899987543  346999999887666


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSL  157 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i  157 (232)
                      .+... .......+.+|.++.|+++....+..+|+++++++...+.+...  .......+++++++.|+++...  ...|
T Consensus       281 ~lt~~-~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~--~~~~~~~~~SpDG~~Ia~~~~~~g~~~I  357 (429)
T PRK03629        281 QVTDG-RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGGQQHI  357 (429)
T ss_pred             EccCC-CCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecC--CCCccCEEECCCCCEEEEEEccCCCceE
Confidence            55542 23456778888777786665433356899999988766555432  3344568899998898887543  3468


Q ss_pred             EEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceEE
Q psy5751         158 ECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSIA  211 (232)
Q Consensus       158 ~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i~  211 (232)
                      +.++++++..+.+.... .-....+  ++..|+++....  ..+..++.+|...+.+.
T Consensus       358 ~~~dl~~g~~~~Lt~~~-~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~  414 (429)
T PRK03629        358 AKQDLATGGVQVLTDTF-LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP  414 (429)
T ss_pred             EEEECCCCCeEEeCCCC-CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEECc
Confidence            88999887766654321 1112233  455676665433  34777888888776554

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=98.94  E-value=9.3e-09  Score=66.39  Aligned_cols=73  Identities=11%  Similarity=0.182  Sum_probs=58.9

Q ss_pred             eEEEEeCCCCeEEEEEcC---------------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          90 RGIVVHPYYRKLFWSDWN---------------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        90 ~~iavd~~~~~ly~~d~~---------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      ++++|++.+|.+||||..               ...+++.+.++.....++++..  +..|||+++++++..|.+++...
T Consensus         1 ndldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~--L~fpNGVals~d~~~vlv~Et~~   78 (89)
T PF03088_consen    1 NDLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDG--LYFPNGVALSPDESFVLVAETGR   78 (89)
T ss_dssp             -EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEE--ESSEEEEEE-TTSSEEEEEEGGG
T ss_pred             CceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhC--CCccCeEEEcCCCCEEEEEeccC
Confidence            478999866999999963               2358999999999888888887  89999999999999999999999


Q ss_pred             CcEEEEecCC
Q psy5751         155 KSLECMTIRN  164 (232)
Q Consensus       155 ~~i~~~~~~g  164 (232)
                      .+|.+.-++|
T Consensus        79 ~Ri~rywl~G   88 (89)
T PF03088_consen   79 YRILRYWLKG   88 (89)
T ss_dssp             TEEEEEESSS
T ss_pred             ceEEEEEEeC
Confidence            9999998887

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF00058 Ldl_recept_b: Low-density lipoprotein receptor repeat class B; InterPro: IPR000033 The low-density lipoprotein receptor (LDLR) is the major cholesterol-carrying lipoprotein of plasma, acting to regulate cholesterol homeostasis in mammalian cells

Probab=98.93  E-value=6.6e-09  Score=57.54  Aligned_cols=41  Identities=39%  Similarity=0.685  Sum_probs=38.9

Q ss_pred             CeEEEEeCCCC-eEEEEeCCCCCCEEEEeCCCCCceEEEEeC
Q psy5751          56 RVLYWTDSQMD-TISMANLNDDQPKVIVSKDLVNPRGIVVHP   96 (232)
Q Consensus        56 ~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~p~~iavd~   96 (232)
                      ++|||+|...+ .|.+.+++|..+++++...+..|.|||||+
T Consensus         1 ~~iYWtD~~~~~~I~~a~~dGs~~~~vi~~~l~~P~giaVD~   42 (42)
T PF00058_consen    1 GKIYWTDWSQDPSIERANLDGSNRRTVISDDLQHPEGIAVDW   42 (42)
T ss_dssp             TEEEEEETTTTEEEEEEETTSTSEEEEEESSTSSEEEEEEET
T ss_pred             CEEEEEECCCCcEEEEEECCCCCeEEEEECCCCCcCEEEECC
Confidence            57999999999 999999999999999999999999999985

The LDL receptor binds LDL and transports it into cells by acidic endocytosis. In order to be internalized, the receptor-ligand complex must first cluster into clathrin-coated pits. Once inside the cell, the LDLR separates from its ligand, which is degraded in the lysosomes, while the receptor returns to the cell surface []. The internal dissociation of the LDLR with its ligand is mediated by proton pumps within the walls of the endosome that lower the pH. The LDLR is a multi-domain protein, containing: The ligand-binding domain contains seven or eight 40-amino acid LDLR class A (cysteine-rich) repeats, each of which contains a coordinated calcium ion and six cysteine residues involved in disulphide bond formation []. Similar domains have been found in other extracellular and membrane proteins []. The second conserved region contains two EGF repeats, followed by six LDLR class B (YWTD) repeats, and another EGF repeat. The LDLR class B repeats each contain a conserved YWTD motif, and is predicted to form a beta-propeller structure []. This region is critical for ligand release and recycling of the receptor []. The third domain is rich in serine and threonine residues and contains clustered O-linked carbohydrate chains. The fourth domain is the hydrophobic transmembrane region. The fifth domain is the cytoplasmic tail that directs the receptor to clathrin-coated pits. LDLR is closely related in structure to several other receptors, including LRP1, LRP1b, megalin/LRP2, VLDL receptor, lipoprotein receptor, MEGF7/LRP4, and LRP8/apolipoprotein E receptor2); these proteins participate in a wide range of physiological processes, including the regulation of lipid metabolism, protection against atherosclerosis, neurodevelopment, and transport of nutrients and vitamins []. This entry represents the LDLR classB (YWTD) repeat, the structure of which has been solved []. The six YWTD repeats together fold into a six-bladed beta-propeller. Each blade of the propeller consists of four antiparallel beta-strands; the innermost strand of each blade is labeled 1 and the outermost strand, 4. The sequence repeats are offset with respect to the blades of the propeller, such that any given 40-residue YWTD repeat spans strands 24 of one propeller blade and strand 1 of the subsequent blade. This offset ensures circularization of the propeller because the last strand of the final sequence repeat acts as an innermost strand 1 of the blade that harbors strands 24 from the first sequence repeat. The repeat is found in a variety of proteins that include, vitellogenin receptor from Drosophila melanogaster, low-density lipoprotein (LDL) receptor [], preproepidermal growth factor, and nidogen (entactin).; PDB: 3S2K_A 3S8Z_A 3S8V_B 4A0P_A 3SOB_B 3S94_B 4DG6_A 3SOV_A 3SOQ_A 1NPE_A ....

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=98.93  E-value=7.4e-07  Score=74.69  Aligned_cols=164  Identities=16%  Similarity=0.183  Sum_probs=113.3

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE------e-CCCCCceEEEEeCC------CCeEEE
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV------S-KDLVNPRGIVVHPY------YRKLFW  103 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~------~-~~~~~p~~iavd~~------~~~ly~  103 (232)
                      +++..++..|.+|++.+ .+++|+++...++|.+++.++.....+.      . .....+.+||++|.      +++||+
T Consensus        23 ~~va~GL~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYv  101 (454)
T TIGR03606        23 KVLLSGLNKPWALLWGP-DNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYI  101 (454)
T ss_pred             EEEECCCCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEE
Confidence            55667899999999998 5689999987789999987654332221      1 13567799999964      468998


Q ss_pred             EEcCC-------CCCcEEEEeCCCC-----CcEEEEEcC---CCCCcceEEEeCCCCEEEEEECC---------------
Q psy5751         104 SDWNR-------SGPKIEWSNLDGT-----DREIFLKAA---DLKLPNSLAVDFRTDELCWVDAD---------------  153 (232)
Q Consensus       104 ~d~~~-------~~~~I~~~~~~g~-----~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~---------------  153 (232)
                      +-...       ...+|.|..++..     ..+.++...   ..+.-..|+|+++ ++||++-..               
T Consensus       102 syt~~~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPD-G~LYVs~GD~g~~~~~n~~~~~~a  180 (454)
T TIGR03606       102 SYTYKNGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPD-GKIYYTIGEQGRNQGANFFLPNQA  180 (454)
T ss_pred             EEeccCCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCC-CcEEEEECCCCCCCcccccCcchh
Confidence            75221       1457888887632     234444321   1234557899997 789997211               


Q ss_pred             -----------------CCcEEEEecCCC-----------ceEEEecCCCceEEEEEE-CCEEEEEeCCC---CcEEEEe
Q psy5751         154 -----------------SKSLECMTIRNR-----------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKT---NRIESAN  201 (232)
Q Consensus       154 -----------------~~~i~~~~~~g~-----------~~~~~~~~~~~p~gla~~-~~~ly~td~~~---~~i~~~~  201 (232)
                                       .++|.|++.||+           ..++++-.+..|.|++++ .+.||.+|.+.   .+|.++.
T Consensus       181 Q~~~~~~~~~~~d~~~~~GkILRin~DGsiP~dNPf~~g~~~eIyA~G~RNp~Gla~dp~G~Lw~~e~Gp~~~DEiN~I~  260 (454)
T TIGR03606       181 QHTPTQQELNGKDYHAYMGKVLRLNLDGSIPKDNPSINGVVSHIFTYGHRNPQGLAFTPDGTLYASEQGPNSDDELNIIV  260 (454)
T ss_pred             ccccccccccccCcccCceEEEEEcCCCCCCCCCCccCCCcceEEEEeccccceeEECCCCCEEEEecCCCCCcEEEEec
Confidence                             347999999986           234556689999999997 78999999765   4555555


Q ss_pred             C
Q psy5751         202 K  202 (232)
Q Consensus       202 ~  202 (232)
                      +
T Consensus       261 ~  261 (454)
T TIGR03606       261 K  261 (454)
T ss_pred             c
Confidence            3

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF00058 Ldl_recept_b: Low-density lipoprotein receptor repeat class B; InterPro: IPR000033 The low-density lipoprotein receptor (LDLR) is the major cholesterol-carrying lipoprotein of plasma, acting to regulate cholesterol homeostasis in mammalian cells

Probab=98.93  E-value=5.7e-09  Score=57.81  Aligned_cols=42  Identities=40%  Similarity=0.964  Sum_probs=38.0

Q ss_pred             CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751          99 RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        99 ~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~  142 (232)
                      ++|||+|+... ++|.+++++|+..++++... +..|.||++|+
T Consensus         1 ~~iYWtD~~~~-~~I~~a~~dGs~~~~vi~~~-l~~P~giaVD~   42 (42)
T PF00058_consen    1 GKIYWTDWSQD-PSIERANLDGSNRRTVISDD-LQHPEGIAVDW   42 (42)
T ss_dssp             TEEEEEETTTT-EEEEEEETTSTSEEEEEESS-TSSEEEEEEET
T ss_pred             CEEEEEECCCC-cEEEEEECCCCCeEEEEECC-CCCcCEEEECC
Confidence            58999999854 58999999999999999887 99999999985

The LDL receptor binds LDL and transports it into cells by acidic endocytosis. In order to be internalized, the receptor-ligand complex must first cluster into clathrin-coated pits. Once inside the cell, the LDLR separates from its ligand, which is degraded in the lysosomes, while the receptor returns to the cell surface []. The internal dissociation of the LDLR with its ligand is mediated by proton pumps within the walls of the endosome that lower the pH. The LDLR is a multi-domain protein, containing: The ligand-binding domain contains seven or eight 40-amino acid LDLR class A (cysteine-rich) repeats, each of which contains a coordinated calcium ion and six cysteine residues involved in disulphide bond formation []. Similar domains have been found in other extracellular and membrane proteins []. The second conserved region contains two EGF repeats, followed by six LDLR class B (YWTD) repeats, and another EGF repeat. The LDLR class B repeats each contain a conserved YWTD motif, and is predicted to form a beta-propeller structure []. This region is critical for ligand release and recycling of the receptor []. The third domain is rich in serine and threonine residues and contains clustered O-linked carbohydrate chains. The fourth domain is the hydrophobic transmembrane region. The fifth domain is the cytoplasmic tail that directs the receptor to clathrin-coated pits. LDLR is closely related in structure to several other receptors, including LRP1, LRP1b, megalin/LRP2, VLDL receptor, lipoprotein receptor, MEGF7/LRP4, and LRP8/apolipoprotein E receptor2); these proteins participate in a wide range of physiological processes, including the regulation of lipid metabolism, protection against atherosclerosis, neurodevelopment, and transport of nutrients and vitamins []. This entry represents the LDLR classB (YWTD) repeat, the structure of which has been solved []. The six YWTD repeats together fold into a six-bladed beta-propeller. Each blade of the propeller consists of four antiparallel beta-strands; the innermost strand of each blade is labeled 1 and the outermost strand, 4. The sequence repeats are offset with respect to the blades of the propeller, such that any given 40-residue YWTD repeat spans strands 24 of one propeller blade and strand 1 of the subsequent blade. This offset ensures circularization of the propeller because the last strand of the final sequence repeat acts as an innermost strand 1 of the blade that harbors strands 24 from the first sequence repeat. The repeat is found in a variety of proteins that include, vitellogenin receptor from Drosophila melanogaster, low-density lipoprotein (LDL) receptor [], preproepidermal growth factor, and nidogen (entactin).; PDB: 3S2K_A 3S8Z_A 3S8V_B 4A0P_A 3SOB_B 3S94_B 4DG6_A 3SOV_A 3SOQ_A 1NPE_A ....

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=98.92  E-value=1.3e-06  Score=69.59  Aligned_cols=180  Identities=17%  Similarity=0.089  Sum_probs=116.3

Q ss_pred             CccEEEEeecCCeEEEEeCCC------------CeEEEEeCCCCCCEEEE--eC----CCCCceEEEEeCCC-----CeE
Q psy5751          45 SPEGLTFDWVNRVLYWTDSQM------------DTISMANLNDDQPKVIV--SK----DLVNPRGIVVHPYY-----RKL  101 (232)
Q Consensus        45 ~p~gl~~d~~~~~ly~~d~~~------------~~I~~~~~~g~~~~~~~--~~----~~~~p~~iavd~~~-----~~l  101 (232)
                      .+.++.+|. .++||+.|.+.            -+|...|+.........  ..    .....++++||...     +..
T Consensus         2 sV~~v~iD~-~~rLWVlD~G~~~~~~~~~~~~~pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~a   80 (287)
T PF03022_consen    2 SVQRVQIDE-CGRLWVLDSGRPNGLQPPKQVCPPKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFA   80 (287)
T ss_dssp             -EEEEEE-T-TSEEEEEE-CCHSSSSTTGHTS--EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEE
T ss_pred             cccEEEEcC-CCCEEEEeCCCcCCCCCCCCCCCcEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEE
Confidence            356788887 67898888763            37888888876632222  22    23355789999743     589


Q ss_pred             EEEEcCCCCCcEEEEeCCCCCcEEEEEcCC------------------CCCcceEEEeC---CCCEEEEEECCCCcEEEE
Q psy5751         102 FWSDWNRSGPKIEWSNLDGTDREIFLKAAD------------------LKLPNSLAVDF---RTDELCWVDADSKSLECM  160 (232)
Q Consensus       102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~------------------~~~p~~l~~d~---~~~~Ly~~d~~~~~i~~~  160 (232)
                      |++|.+.  +-|.++++......-+.....                  .....|+++++   ++++|||......+++++
T Consensus        81 YItD~~~--~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~~ly~v  158 (287)
T PF03022_consen   81 YITDSGG--PGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSRKLYRV  158 (287)
T ss_dssp             EEEETTT--CEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-SEEEEE
T ss_pred             EEeCCCc--CcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCCcEEEE
Confidence            9999873  357777776543332222110                  11245788876   557999999888899998


Q ss_pred             ecC----CC---------ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC----CCcceEEeccCCcceeEE
Q psy5751         161 TIR----NR---------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG----ERAPSIALDMMGTTYMYG  222 (232)
Q Consensus       161 ~~~----g~---------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g----~~~~~i~~~~~~~~~p~g  222 (232)
                      +.+    ..         ..+.+.+......|++++ .|.||+++...+.|.+.++++    +....+......+..|.+
T Consensus       159 ~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~  238 (287)
T PF03022_consen  159 PTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDG  238 (287)
T ss_dssp             EHHHHCSTT--HHH-HHHT-EEEEE---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEE
T ss_pred             EHHHhhCccccccccccccceeccccCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccce
Confidence            764    11         122333334566799997 899999999999999999997    455566666666889999


Q ss_pred             EEEEc
Q psy5751         223 IAAVP  227 (232)
Q Consensus       223 i~~~~  227 (232)
                      +++.+
T Consensus       239 ~~i~~  243 (287)
T PF03022_consen  239 LKIDP  243 (287)
T ss_dssp             EEE-T
T ss_pred             eeecc
Confidence            99987

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.91  E-value=2.7e-06  Score=71.56  Aligned_cols=204  Identities=12%  Similarity=0.047  Sum_probs=129.3

Q ss_pred             EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEE
Q psy5751           4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKV   80 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~   80 (232)
                      +..|++..+.|+++....+ ..|+.+++.+.....+... -.....+++.+.++.|+++...  ...|+.+++++...+.
T Consensus       194 ~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~-~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~  272 (417)
T TIGR02800       194 SPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASF-PGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTR  272 (417)
T ss_pred             cccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecC-CCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEE
Confidence            4567787888888765543 3789999886654333322 1234557788877888877544  3469999998776554


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~  158 (232)
                      +... .......+..+.+++|+++.......+|+.+++++...+.+...  .......+++++++.|+++....  .+|+
T Consensus       273 l~~~-~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~--~~~~~~~~~spdg~~i~~~~~~~~~~~i~  349 (417)
T TIGR02800       273 LTNG-PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFR--GGYNASPSWSPDGDLIAFVHREGGGFNIA  349 (417)
T ss_pred             CCCC-CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC--CCCccCeEECCCCCEEEEEEccCCceEEE
Confidence            4431 11223456777677787775443456899999988765544433  34556788999888999987643  3789


Q ss_pred             EEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceEEe
Q psy5751         159 CMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSIAL  212 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~  212 (232)
                      .++++++..+.+.+.. .....++  ++..|+++....  ..++.++.+|...+.+..
T Consensus       350 ~~d~~~~~~~~l~~~~-~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~~~~~~~  406 (417)
T TIGR02800       350 VMDLDGGGERVLTDTG-LDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRFRARLPL  406 (417)
T ss_pred             EEeCCCCCeEEccCCC-CCCCceECCCCCEEEEEEeCCCcEEEEEEECCCceeeECCC
Confidence            9999886665554321 1222233  566777775543  346666666766555543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.89  E-value=6.7e-06  Score=66.98  Aligned_cols=213  Identities=8%  Similarity=-0.038  Sum_probs=123.2

Q ss_pred             eEEEEEeCCCCEEEEEEc---------CCCCcEEEEEcCCCcee-EEEeCC------CCCccEEEEeecCCeEEEEeCC-
Q psy5751           2 LIGITVDCVEGQVYYSSV---------ADKSSIKRAHLDGKNVE-DVITTN------IRSPEGLTFDWVNRVLYWTDSQ-   64 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~---------~~~~~i~~~~~~g~~~~-~~~~~~------~~~p~gl~~d~~~~~ly~~d~~-   64 (232)
                      |.++ +.+..+.||+++.         ..+ .|..++....... ++-.+.      ...|..+++.+.++.||+++.. 
T Consensus        49 P~~~-~spDg~~lyva~~~~~R~~~G~~~d-~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p  126 (352)
T TIGR02658        49 PNPV-VASDGSFFAHASTVYSRIARGKRTD-YVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSP  126 (352)
T ss_pred             Ccee-ECCCCCEEEEEeccccccccCCCCC-EEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCC
Confidence            5565 8888999999998         666 8999998865543 332221      2355599999999999999966 


Q ss_pred             CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcc
Q psy5751          65 MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPN  136 (232)
Q Consensus        65 ~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~  136 (232)
                      ...+.++|+.......-+... ..+.-+...+.+..+.+.|.     +.....++..+.....+..        .+..| 
T Consensus       127 ~~~V~VvD~~~~kvv~ei~vp-~~~~vy~t~e~~~~~~~~Dg-----~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP-  199 (352)
T TIGR02658       127 SPAVGVVDLEGKAFVRMMDVP-DCYHIFPTANDTFFMHCRDG-----SLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP-  199 (352)
T ss_pred             CCEEEEEECCCCcEEEEEeCC-CCcEEEEecCCccEEEeecC-----ceEEEEecCCCceEEeeeeeecCCccccccCC-
Confidence            889999999876643333311 12223333332333333332     2333333332221111111        12345 


Q ss_pred             eEEEeC-CCCEEEEEECCCCcEEEEecCCCceEEEe--c----C----CCceEE---EEE--ECCEEEEEe-C-------
Q psy5751         137 SLAVDF-RTDELCWVDADSKSLECMTIRNRVRRKVY--S----N----CTYPFG---LSI--TDEKYYWTD-W-------  192 (232)
Q Consensus       137 ~l~~d~-~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~--~----~----~~~p~g---la~--~~~~ly~td-~-------  192 (232)
                        .+.+ ++.++|++..  +.|..+++.+.......  +    .    .-.|-|   +++  +.+++|++. .       
T Consensus       200 --~~~~~dg~~~~vs~e--G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk  275 (352)
T TIGR02658       200 --AYSNKSGRLVWPTYT--GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHK  275 (352)
T ss_pred             --ceEcCCCcEEEEecC--CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCcccccc
Confidence              4455 4445555543  99999998765332221  1    1    113444   777  478999953 2       


Q ss_pred             -CCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEEcCCCC
Q psy5751         193 -KTNRIESANKEGER-APSIALDMMGTTYMYGIAAVPSSCP  231 (232)
Q Consensus       193 -~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~~~~~~  231 (232)
                       ..+.|..++..... ...+..    -..|.+|++-+++-|
T Consensus       276 ~~~~~V~ViD~~t~kvi~~i~v----G~~~~~iavS~Dgkp  312 (352)
T TIGR02658       276 TASRFLFVVDAKTGKRLRKIEL----GHEIDSINVSQDAKP  312 (352)
T ss_pred             CCCCEEEEEECCCCeEEEEEeC----CCceeeEEECCCCCe
Confidence             22689999976333 333332    237899999888754

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=98.83  E-value=3e-08  Score=64.03  Aligned_cols=69  Identities=17%  Similarity=0.205  Sum_probs=57.6

Q ss_pred             ceEEEeCCCCEEEEEECC-----------------CCcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCc
Q psy5751         136 NSLAVDFRTDELCWVDAD-----------------SKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNR  196 (232)
Q Consensus       136 ~~l~~d~~~~~Ly~~d~~-----------------~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~  196 (232)
                      |+|+|+..+|.+||+|+.                 ++++.+.++.+...++++.++..|+|+++  ++..|++++....+
T Consensus         1 ndldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et~~~R   80 (89)
T PF03088_consen    1 NDLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAETGRYR   80 (89)
T ss_dssp             -EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEGGGTE
T ss_pred             CceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEeccCce
Confidence            589999988999999873                 68999999999999999999999999999  47799999999999


Q ss_pred             EEEEeCCC
Q psy5751         197 IESANKEG  204 (232)
Q Consensus       197 i~~~~~~g  204 (232)
                      |.|.-..|
T Consensus        81 i~rywl~G   88 (89)
T PF03088_consen   81 ILRYWLKG   88 (89)
T ss_dssp             EEEEESSS
T ss_pred             EEEEEEeC
Confidence            99887665

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.83  E-value=9.3e-06  Score=67.10  Aligned_cols=190  Identities=14%  Similarity=0.129  Sum_probs=119.2

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR   90 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~   90 (232)
                      .+.+|+++-..+ +|..++.+....-..+...-.-+.++++.+.++.+|+++. .+.|.++|+........+. ....|.
T Consensus         5 ~~l~~V~~~~~~-~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~r-dg~vsviD~~~~~~v~~i~-~G~~~~   81 (369)
T PF02239_consen    5 GNLFYVVERGSG-SVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANR-DGTVSVIDLATGKVVATIK-VGGNPR   81 (369)
T ss_dssp             GGEEEEEEGGGT-EEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEET-TSEEEEEETTSSSEEEEEE--SSEEE
T ss_pred             ccEEEEEecCCC-EEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcC-CCeEEEEECCcccEEEEEe-cCCCcc
Confidence            456678888888 8999888865544444443222456777887899999975 5799999998877544444 345799


Q ss_pred             EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC------CCCcceEEEeCCCCEEEEEECCCCcEEEEecCC
Q psy5751          91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD------LKLPNSLAVDFRTDELCWVDADSKSLECMTIRN  164 (232)
Q Consensus        91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g  164 (232)
                      ++++++.++++|++...  .+.+..++.........+....      -..+.+|...+.+...+++-...++|+.+++..
T Consensus        82 ~i~~s~DG~~~~v~n~~--~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d  159 (369)
T PF02239_consen   82 GIAVSPDGKYVYVANYE--PGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSD  159 (369)
T ss_dssp             EEEE--TTTEEEEEEEE--TTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTT
T ss_pred             eEEEcCCCCEEEEEecC--CCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecc
Confidence            99999988999999876  4567777765443222222110      112346666666454555556678999999876


Q ss_pred             CceE--EEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCC
Q psy5751         165 RVRR--KVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       165 ~~~~--~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~  205 (232)
                      .+..  ........|++..++  +.+++.+...++.|..++....
T Consensus       160 ~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~  204 (369)
T PF02239_consen  160 PKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTG  204 (369)
T ss_dssp             SSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTT
T ss_pred             ccccceeeecccccccccccCcccceeeecccccceeEEEeeccc
Confidence            5332  233456678888886  3467788888889998887743

...

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.80  E-value=2.8e-05  Score=65.72  Aligned_cols=204  Identities=9%  Similarity=0.086  Sum_probs=124.6

Q ss_pred             EEEeCCCCE---EEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEE--eCCC--
Q psy5751           5 ITVDCVEGQ---VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMA--NLND--   75 (232)
Q Consensus         5 i~~d~~~~~---ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~--~~~g--   75 (232)
                      -.|.+....   +|++.....+.|+.++++|...+.+.... ......++.+.++.|.|+...  +..|+..  ++++  
T Consensus       190 P~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~-g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~  268 (428)
T PRK01029        190 PTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQ-GNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGA  268 (428)
T ss_pred             ceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCC-CCccceEECCCCCEEEEEECCCCCcceeEEEeecccCC
Confidence            357775544   34554443358999999987665554321 233456788878888887643  3356654  4432  


Q ss_pred             -CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          76 -DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        76 -~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                       ...+.+...........+.+|.++.|+++....+..+|+++++++..  .+.+...  ........+++++++|+++..
T Consensus       269 ~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~--~~~~~~p~wSPDG~~Laf~~~  346 (428)
T PRK01029        269 IGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKK--YRNSSCPAWSPDGKKIAFCSV  346 (428)
T ss_pred             CCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccC--CCCccceeECCCCCEEEEEEc
Confidence             23334443222333456889877777776543345679999886432  3333222  233456789999889988854


Q ss_pred             C--CCcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeC--CCCcEEEEeCCCCCcceEE
Q psy5751         153 D--SKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDW--KTNRIESANKEGERAPSIA  211 (232)
Q Consensus       153 ~--~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~--~~~~i~~~~~~g~~~~~i~  211 (232)
                      .  ...|+.+++++++.+.+..........++  ++..|+++-.  +...|+.++.++...+.+.
T Consensus       347 ~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt  411 (428)
T PRK01029        347 IKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV  411 (428)
T ss_pred             CCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence            3  34799999998877766543223345555  3556776533  3467889998877666554

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.79  E-value=1.1e-05  Score=68.30  Aligned_cols=195  Identities=12%  Similarity=0.016  Sum_probs=124.1

Q ss_pred             CCEEEEEEcCC----CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeC
Q psy5751          11 EGQVYYSSVAD----KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSK   84 (232)
Q Consensus        11 ~~~ly~~d~~~----~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~   84 (232)
                      +...|+++...    ..+|+.++.+|...+.+... .......++.+.++.|+++...  ...|++.++.+...+.+.. 
T Consensus       166 ~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~-~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~-  243 (435)
T PRK05137        166 TRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDG-SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGN-  243 (435)
T ss_pred             CeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecC-CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeec-
Confidence            34455555443    13788999988776554433 3455667788878888777543  4679999998876655543 


Q ss_pred             CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEec
Q psy5751          85 DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTI  162 (232)
Q Consensus        85 ~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~  162 (232)
                      ......+.+++|.++.|+++....+...|+.+++++...+.+...  ........+++++.+|+++...  ...|+.+++
T Consensus       244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~--~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~  321 (435)
T PRK05137        244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDS--PAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNA  321 (435)
T ss_pred             CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEEccCC--CCccCceeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence            112334677888777887765443467899999988776655433  2334567889988888877543  347999999


Q ss_pred             CCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcce
Q psy5751         163 RNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPS  209 (232)
Q Consensus       163 ~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~  209 (232)
                      +++..+.+......-...++  +++.|+++....  ..|..++.+++..+.
T Consensus       322 ~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~  372 (435)
T PRK05137        322 DGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERI  372 (435)
T ss_pred             CCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceEe
Confidence            98877666432222222334  456776664332  367777776655443

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.78  E-value=1.1e-05  Score=68.62  Aligned_cols=196  Identities=10%  Similarity=0.032  Sum_probs=123.9

Q ss_pred             CCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeCC
Q psy5751          11 EGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSKD   85 (232)
Q Consensus        11 ~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~   85 (232)
                      ....|++.....   .+|+.++.+|.+.+.+... .......++.+.++.|+|+...  ...|++.++++...+.+....
T Consensus       183 ~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~-~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~  261 (448)
T PRK04792        183 TRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRS-PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP  261 (448)
T ss_pred             CEEEEEEeeCCCCCceEEEEEeCCCCCceEeecC-CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC
Confidence            344566543321   2677788888765444432 2344567788888888887544  347999999887665554311


Q ss_pred             CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecC
Q psy5751          86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIR  163 (232)
Q Consensus        86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~  163 (232)
                       ......+.+|.++.|+++....+..+|+.+++++...+.+...  .......++++++++|+++...  ...|+.++++
T Consensus       262 -g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~--~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~  338 (448)
T PRK04792        262 -GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRITRH--RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLA  338 (448)
T ss_pred             -CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence             1223578888788888865433456799999988776555433  2345567889998889887543  3579999998


Q ss_pred             CCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751         164 NRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSI  210 (232)
Q Consensus       164 g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i  210 (232)
                      +++.+.+........+.++  +++.|+++....  ..|+.++.++...+.+
T Consensus       339 ~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~l  389 (448)
T PRK04792        339 SGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVL  389 (448)
T ss_pred             CCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEc
Confidence            7766555322222233344  466787775533  3677788776655433

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.76  E-value=1.3e-05  Score=67.73  Aligned_cols=194  Identities=9%  Similarity=0.079  Sum_probs=119.5

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLVN   88 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~   88 (232)
                      +...|++......+|+.++.+|...+.+... .......++.+.++.|+++....  ..|+..++++.....+.... ..
T Consensus       164 ~~iayv~~~~~~~~L~~~D~dG~~~~~l~~~-~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~-g~  241 (427)
T PRK02889        164 TRIAYVIKTGNRYQLQISDADGQNAQSALSS-PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFK-GS  241 (427)
T ss_pred             cEEEEEEccCCccEEEEECCCCCCceEeccC-CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCC-CC
Confidence            4455666443323799999988775555433 23455678888788888876443  46999999877665554322 23


Q ss_pred             ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEEEEecCCCc
Q psy5751          89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLECMTIRNRV  166 (232)
Q Consensus        89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~~~~~~g~~  166 (232)
                      ....+.+|..+.|+++-...+..+|+.+++++...+.+...  .......++++++.+|+++..  +...|+.++.+++.
T Consensus       242 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~--~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~  319 (427)
T PRK02889        242 NSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQS--SGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA  319 (427)
T ss_pred             ccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCC--CCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence            34678898777888765443467899999988766554332  223345679999888887643  34578999888766


Q ss_pred             eEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcc
Q psy5751         167 RRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAP  208 (232)
Q Consensus       167 ~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~  208 (232)
                      .+.+..........++  ++.+|+++....  ..|..++..++..+
T Consensus       320 ~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~  365 (427)
T PRK02889        320 AQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT  365 (427)
T ss_pred             eEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE
Confidence            5444322111122334  455666554322  25666776644433

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.76  E-value=1.5e-05  Score=67.09  Aligned_cols=196  Identities=11%  Similarity=0.015  Sum_probs=125.4

Q ss_pred             CCEEEEEEc-CC-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCe-EEEEeCC--CCeEEEEeCCCCCCEEEEeCC
Q psy5751          11 EGQVYYSSV-AD-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRV-LYWTDSQ--MDTISMANLNDDQPKVIVSKD   85 (232)
Q Consensus        11 ~~~ly~~d~-~~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~-ly~~d~~--~~~I~~~~~~g~~~~~~~~~~   85 (232)
                      +..+|++.. .. ..+|+.++.+|.+.+.+....  ........+.++. +|++...  ...|++.++.+...+.+....
T Consensus       155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~~--~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~  232 (419)
T PRK04043        155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKGG--LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQ  232 (419)
T ss_pred             eeEEEEEEccCCCcceEEEECCCCCceeEEccCC--CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCC
Confidence            567788763 21 238999999998865555432  3334566666664 7776554  467999999887777766421


Q ss_pred             CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecC
Q psy5751          86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIR  163 (232)
Q Consensus        86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~  163 (232)
                       ........+|.++.|.++....+...|+.+++++...+.+.... . .-..-.+++++++||++...  ...|++++++
T Consensus       233 -g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~-~-~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~  309 (419)
T PRK04043        233 -GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYP-G-IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLN  309 (419)
T ss_pred             -CcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCC-C-ccCccEECCCCCEEEEEECCCCCceEEEEECC
Confidence             12233557887778888766545788999999888766654432 1 12234689998899998654  3489999999


Q ss_pred             CCceEEEecCCCceEEEEEECCEEEEEeCCC--------CcEEEEeCCCCCcceEE
Q psy5751         164 NRVRRKVYSNCTYPFGLSITDEKYYWTDWKT--------NRIESANKEGERAPSIA  211 (232)
Q Consensus       164 g~~~~~~~~~~~~p~gla~~~~~ly~td~~~--------~~i~~~~~~g~~~~~i~  211 (232)
                      ++..+.+......-..+.-+++.|.++....        ..|+.++.+++..+.+.
T Consensus       310 ~g~~~rlt~~g~~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT  365 (419)
T PRK04043        310 SGSVEQVVFHGKNNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLT  365 (419)
T ss_pred             CCCeEeCccCCCcCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECC
Confidence            8877555332111112223566666664332        46888888766655443

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.69  E-value=5e-05  Score=64.23  Aligned_cols=196  Identities=8%  Similarity=0.005  Sum_probs=123.6

Q ss_pred             CCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC--CCCeEEEEeCCCCCCEEEEeCC
Q psy5751          11 EGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS--QMDTISMANLNDDQPKVIVSKD   85 (232)
Q Consensus        11 ~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~   85 (232)
                      +...|+....++   ++|+.++.+|.+.+.+... -......++.+.++.|.++..  ....|+..++++...+.+....
T Consensus       164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~-~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~  242 (429)
T PRK03629        164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFP  242 (429)
T ss_pred             CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecC-CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCC
Confidence            445566653321   3799999998876555443 235567888888888877643  2357999999887665554311


Q ss_pred             CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecC
Q psy5751          86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIR  163 (232)
Q Consensus        86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~  163 (232)
                       ......+.+|.+..|+++....+...|+.+++++...+.+...  -......++++++++|+++-..  ..+|+.++++
T Consensus       243 -~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~--~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~  319 (429)
T PRK03629        243 -RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNIN  319 (429)
T ss_pred             -CCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCC--CCCcCceEECCCCCEEEEEeCCCCCceEEEEECC
Confidence             2234578999888899875543345799999988766655443  2345678899998888666432  3489999999


Q ss_pred             CCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751         164 NRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSI  210 (232)
Q Consensus       164 g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i  210 (232)
                      ++..+.+..........++  ++..|+++...+  ..|+.++..+...+.+
T Consensus       320 ~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~L  370 (429)
T PRK03629        320 GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL  370 (429)
T ss_pred             CCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEe
Confidence            8766655332222223344  355665554322  3466677665544433

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.68  E-value=2.6e-05  Score=66.07  Aligned_cols=183  Identities=11%  Similarity=0.085  Sum_probs=117.8

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKL  101 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~l  101 (232)
                      .|+.++.+|.....+... -....+.++.+.++.|+++...  ...|++.++++.....+.... ......+++|.++.|
T Consensus       185 ~l~i~D~~g~~~~~lt~~-~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~-g~~~~~~~SpDG~~l  262 (433)
T PRK04922        185 ALQVADSDGYNPQTILRS-AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFR-GINGAPSFSPDGRRL  262 (433)
T ss_pred             EEEEECCCCCCceEeecC-CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCC-CCccCceECCCCCEE
Confidence            588888888766555433 2345567777878888887644  346999999887665554321 123367888877788


Q ss_pred             EEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecCCCceEEEecCCCceEE
Q psy5751         102 FWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIRNRVRRKVYSNCTYPFG  179 (232)
Q Consensus       102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~g~~~~~~~~~~~~p~g  179 (232)
                      +++....+...|+.+++++...+.+...  .......++++++.+|+++...  ...|+.++++++..+.+.........
T Consensus       263 ~~~~s~~g~~~Iy~~d~~~g~~~~lt~~--~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~  340 (433)
T PRK04922        263 ALTLSRDGNPEIYVMDLGSRQLTRLTNH--FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNAR  340 (433)
T ss_pred             EEEEeCCCCceEEEEECCCCCeEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccC
Confidence            8775443456899999988776554433  2234567899998888887543  34699999987765554322222234


Q ss_pred             EEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751         180 LSI--TDEKYYWTDWKT--NRIESANKEGERAPSI  210 (232)
Q Consensus       180 la~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i  210 (232)
                      .++  ++..++++....  ..|..++..++..+.+
T Consensus       341 ~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~L  375 (433)
T PRK04922        341 ASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTL  375 (433)
T ss_pred             EEECCCCCEEEEEECCCCceeEEEEECCCCCeEEC
Confidence            455  466777765433  3577888776554433

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.66  E-value=4.8e-05  Score=63.99  Aligned_cols=193  Identities=14%  Similarity=0.096  Sum_probs=121.9

Q ss_pred             CEEEEEEcC-C-CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCC
Q psy5751          12 GQVYYSSVA-D-KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLV   87 (232)
Q Consensus        12 ~~ly~~d~~-~-~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~   87 (232)
                      ..+|+.... . ...|+.++.+|...+.+.... ......++.+.++.|+|+....  ..|++.++.+.....+.. ...
T Consensus       157 ~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~-~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~-~~~  234 (417)
T TIGR02800       157 RIAYVSKSGKSRRYELQVADYDGANPQTITRSR-EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS-FPG  234 (417)
T ss_pred             EEEEEEEeCCCCcceEEEEcCCCCCCEEeecCC-CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec-CCC
Confidence            345555543 1 136888888877665555432 2345567778788898886543  579999988765544443 212


Q ss_pred             CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecCCC
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIRNR  165 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~g~  165 (232)
                      ....++.+|.++.|+++....+...|+..++++...+.+...  ........+++++.+|+++...  ...|+.+++++.
T Consensus       235 ~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~  312 (417)
T TIGR02800       235 MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNG--PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGG  312 (417)
T ss_pred             CccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCC--CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence            344578888777888876544456799999987765554332  1223355778887888877543  347999999887


Q ss_pred             ceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcc
Q psy5751         166 VRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAP  208 (232)
Q Consensus       166 ~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~  208 (232)
                      +.+.+..........++  ++..++++....  .+|..++..+...+
T Consensus       313 ~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~  359 (417)
T TIGR02800       313 EVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER  359 (417)
T ss_pred             CEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE
Confidence            76555433333344455  356777776543  36777777764444

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=98.65  E-value=1.3e-05  Score=67.32  Aligned_cols=148  Identities=18%  Similarity=0.194  Sum_probs=100.9

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE------Ee-CCCCCccEEEEeec------CCeEEEEeC----
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV------IT-TNIRSPEGLTFDWV------NRVLYWTDS----   63 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~------~~-~~~~~p~gl~~d~~------~~~ly~~d~----   63 (232)
                      .|.+|+|.+ +++||++.-..+ +|.++...+.....+      .. ..-....||++++.      ++.||++-.    
T Consensus        31 ~Pw~maflP-DG~llVtER~~G-~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~  108 (454)
T TIGR03606        31 KPWALLWGP-DNQLWVTERATG-KILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG  108 (454)
T ss_pred             CceEEEEcC-CCeEEEEEecCC-EEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Confidence            478999998 679999987556 899987665432222      11 13467899999854      467998742    


Q ss_pred             -----CCCeEEEEeCCCC-----CCEEEEeC----CCCCceEEEEeCCCCeEEEEEcCC---------------------
Q psy5751          64 -----QMDTISMANLNDD-----QPKVIVSK----DLVNPRGIVVHPYYRKLFWSDWNR---------------------  108 (232)
Q Consensus        64 -----~~~~I~~~~~~g~-----~~~~~~~~----~~~~p~~iavd~~~~~ly~~d~~~---------------------  108 (232)
                           ...+|.+..++..     ..+.++..    ....-..|+++| .|.||++-...                     
T Consensus       109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgP-DG~LYVs~GD~g~~~~~n~~~~~~aQ~~~~~~  187 (454)
T TIGR03606       109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGP-DGKIYYTIGEQGRNQGANFFLPNQAQHTPTQQ  187 (454)
T ss_pred             CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECC-CCcEEEEECCCCCCCcccccCcchhccccccc
Confidence                 2457888877532     13455541    123346889998 78999974332                     


Q ss_pred             ---------CCCcEEEEeCCCCC-----------cEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751         109 ---------SGPKIEWSNLDGTD-----------REIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus       109 ---------~~~~I~~~~~~g~~-----------~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                               ..++|.|++.||+.           .++....  +.+|.++++|+ +++||.+|.+.
T Consensus       188 ~~~~~d~~~~~GkILRin~DGsiP~dNPf~~g~~~eIyA~G--~RNp~Gla~dp-~G~Lw~~e~Gp  250 (454)
T TIGR03606       188 ELNGKDYHAYMGKVLRLNLDGSIPKDNPSINGVVSHIFTYG--HRNPQGLAFTP-DGTLYASEQGP  250 (454)
T ss_pred             cccccCcccCceEEEEEcCCCCCCCCCCccCCCcceEEEEe--ccccceeEECC-CCCEEEEecCC
Confidence                     13589999999863           2344444  88999999999 59999998763

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.64  E-value=5.6e-05  Score=63.96  Aligned_cols=199  Identities=12%  Similarity=0.082  Sum_probs=124.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~   79 (232)
                      .++.|++..+.|.++...++ +.|+..++.+...+.+... ......+++.+.++.|+++....  -.|+.+++++....
T Consensus       207 ~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~-~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~  285 (429)
T PRK01742        207 MSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASF-RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPS  285 (429)
T ss_pred             ccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecC-CCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeE
Confidence            35788888888877755432 4799999987654333322 12334578888788888864332  36888898877655


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      .+.. ........+.+|.+..|+++....+..+|+.++.++...+.+ ...   . ...+++++++.|+++..  ..+..
T Consensus       286 ~lt~-~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~---~-~~~~~SpDG~~ia~~~~--~~i~~  357 (429)
T PRK01742        286 QLTS-GAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGR---G-YSAQISADGKTLVMING--DNVVK  357 (429)
T ss_pred             eecc-CCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCC---C-CCccCCCCCCEEEEEcC--CCEEE
Confidence            5543 333455678888777777775443467899998887765544 221   1 34678888888888754  56788


Q ss_pred             EecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCC-C-cEEEEeCCCCCcceEE
Q psy5751         160 MTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT-N-RIESANKEGERAPSIA  211 (232)
Q Consensus       160 ~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~-~-~i~~~~~~g~~~~~i~  211 (232)
                      +++.++..+.+.... ....+++  ++..|+++.... . .+..++.+|...+.+.
T Consensus       358 ~Dl~~g~~~~lt~~~-~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~  412 (429)
T PRK01742        358 QDLTSGSTEVLSSTF-LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP  412 (429)
T ss_pred             EECCCCCeEEecCCC-CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc
Confidence            888876655443321 1123344  455677664432 2 2344566777666553

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=98.64  E-value=1.2e-05  Score=62.91  Aligned_cols=188  Identities=17%  Similarity=0.133  Sum_probs=121.1

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-----CCCCEEEEe-C------CCCCceEEEEeCCCC-----
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-----DDQPKVIVS-K------DLVNPRGIVVHPYYR-----   99 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-----g~~~~~~~~-~------~~~~p~~iavd~~~~-----   99 (232)
                      ....+.+..|+||++.+ ++.++++|..++....++.+     |.....++. .      ....|-|+++....+     
T Consensus        16 ~~tDp~L~N~WGia~~p-~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~   94 (336)
T TIGR03118        16 QIVDPGLRNAWGLSYRP-GGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSG   94 (336)
T ss_pred             cccCccccccceeEecC-CCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcC
Confidence            34446788999999999 66889999999999999887     544333333 1      234688888774333     


Q ss_pred             --------eEEEEEcCCCCCcEEEEeC--CCC---CcEEEEEcC-CCCCcceEEEeCC--CCEEEEEECCCCcEEEEecC
Q psy5751         100 --------KLFWSDWNRSGPKIEWSNL--DGT---DREIFLKAA-DLKLPNSLAVDFR--TDELCWVDADSKSLECMTIR  163 (232)
Q Consensus       100 --------~ly~~d~~~~~~~I~~~~~--~g~---~~~~~~~~~-~~~~p~~l~~d~~--~~~Ly~~d~~~~~i~~~~~~  163 (232)
                              .||.++    .+.|...+.  +..   ...+++... ....-.||++-..  ..+||-+|-.+++|..++-.
T Consensus        95 ~g~~~~a~Fif~tE----dGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~  170 (336)
T TIGR03118        95 EGITGPSRFLFVTE----DGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGS  170 (336)
T ss_pred             CCcccceeEEEEeC----CceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCc
Confidence                    244443    223433332  222   122333321 1222358888754  57999999999999997444


Q ss_pred             CCceEE---Ee----cCCCceEEEEEECCEEEEEeC-------------CCCcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751         164 NRVRRK---VY----SNCTYPFGLSITDEKYYWTDW-------------KTNRIESANKEGERAPSIALDMMGTTYMYGI  223 (232)
Q Consensus       164 g~~~~~---~~----~~~~~p~gla~~~~~ly~td~-------------~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi  223 (232)
                      -.....   +.    -..-.|++|...+++||||-.             +.+.|-.++.+|..++.+.. ...++.|+||
T Consensus       171 f~~~~~~g~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as-~g~LNaPWG~  249 (336)
T TIGR03118       171 FRPPPLPGSFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVAS-SGRLNAPWGL  249 (336)
T ss_pred             cccccCCCCccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEecc-CCcccCCcee
Confidence            222211   00    012347888889999999843             33588899999988886643 3448899999


Q ss_pred             EEEcCCC
Q psy5751         224 AAVPSSC  230 (232)
Q Consensus       224 ~~~~~~~  230 (232)
                      |+.+..|
T Consensus       250 a~APa~F  256 (336)
T TIGR03118       250 AIAPESF  256 (336)
T ss_pred             eeChhhh
Confidence            9998776

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>smart00135 LY Low-density lipoprotein-receptor YWTD domain

Probab=98.62  E-value=1.7e-07  Score=52.14  Aligned_cols=35  Identities=31%  Similarity=0.495  Sum_probs=33.4

Q ss_pred             CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751         132 LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV  166 (232)
Q Consensus       132 ~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~  166 (232)
                      +..|+|+++|+.+++|||+|.....|++++++|..
T Consensus         8 ~~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~g~~   42 (43)
T smart00135        8 LGHPNGLAVDWIEGRLYWTDWGLDVIEVANLDGTN   42 (43)
T ss_pred             CCCcCEEEEeecCCEEEEEeCCCCEEEEEeCCCCC
Confidence            89999999999999999999999999999999875

Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=98.62  E-value=4.4e-05  Score=59.91  Aligned_cols=201  Identities=15%  Similarity=0.145  Sum_probs=123.3

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-----CCceeEEEe-C------CCCCccEEEEeecCC------------
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLD-----GKNVEDVIT-T------NIRSPEGLTFDWVNR------------   56 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-----g~~~~~~~~-~------~~~~p~gl~~d~~~~------------   56 (232)
                      +|=||++.+ .+.+|++|-..+ ....++.+     |.....++. +      ....|.|+.+.....            
T Consensus        24 N~WGia~~p-~~~~WVadngT~-~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a  101 (336)
T TIGR03118        24 NAWGLSYRP-GGPFWVANTGTG-TATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS  101 (336)
T ss_pred             ccceeEecC-CCCEEEecCCcc-eEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence            355889988 667888887666 55555555     333222222 1      235788988875332            


Q ss_pred             -eEEEEeCCCCeEEEEeCCCCCC----E-EEEeCC--CCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCCcEEE
Q psy5751          57 -VLYWTDSQMDTISMANLNDDQP----K-VIVSKD--LVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTDREIF  126 (232)
Q Consensus        57 -~ly~~d~~~~~I~~~~~~g~~~----~-~~~~~~--~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~~~~~  126 (232)
                       .||.++.  +.|.-....-...    . ++++.+  ..-=.|+|+...  ..+||-++..  .++|.+.+-.-....  
T Consensus       102 ~Fif~tEd--GTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~--~g~IDVFd~~f~~~~--  175 (336)
T TIGR03118       102 RFLFVTED--GTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFR--QGRIDVFKGSFRPPP--  175 (336)
T ss_pred             eEEEEeCC--ceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccC--CCceEEecCcccccc--
Confidence             2443333  3455444322111    2 233322  222368887743  5899999986  567887754333221  


Q ss_pred             EEcC-------CCCCcceEEEeCCCCEEEEEE-------------CCCCcEEEEecCCCceEEEec--CCCceEEEEE--
Q psy5751         127 LKAA-------DLKLPNSLAVDFRTDELCWVD-------------ADSKSLECMTIRNRVRRKVYS--NCTYPFGLSI--  182 (232)
Q Consensus       127 ~~~~-------~~~~p~~l~~d~~~~~Ly~~d-------------~~~~~i~~~~~~g~~~~~~~~--~~~~p~gla~--  182 (232)
                      +...       --..|-+|.--  +++||++=             .+.+.|..++++|.-.+.+.+  .+..|+||++  
T Consensus       176 ~~g~F~DP~iPagyAPFnIqni--g~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as~g~LNaPWG~a~AP  253 (336)
T TIGR03118       176 LPGSFIDPALPAGYAPFNVQNL--GGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVASSGRLNAPWGLAIAP  253 (336)
T ss_pred             CCCCccCCCCCCCCCCcceEEE--CCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEeccCCcccCCceeeeCh
Confidence            1111       02344455333  48999992             124689999999998887865  6899999997  


Q ss_pred             -----ECCEEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751         183 -----TDEKYYWTDWKTNRIESANKE-GERAPSIA  211 (232)
Q Consensus       183 -----~~~~ly~td~~~~~i~~~~~~-g~~~~~i~  211 (232)
                           +.+.|.+-+.+.++|-.+++. |...-.++
T Consensus       254 a~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~  288 (336)
T TIGR03118       254 ESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLL  288 (336)
T ss_pred             hhhCCCCCCeEEeecCCceeEEecCCCCceeeeec
Confidence                 378999999999999999987 55444343

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.62  E-value=7.4e-05  Score=63.24  Aligned_cols=196  Identities=9%  Similarity=0.054  Sum_probs=121.3

Q ss_pred             CCEEEEEEcCCC----CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeC
Q psy5751          11 EGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSK   84 (232)
Q Consensus        11 ~~~ly~~d~~~~----~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~   84 (232)
                      +..+|++.....    .+|+.++.+|.....+.... ......++.+.++.|+++...  ...|++.++++...+.+...
T Consensus       163 ~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~-~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~  241 (430)
T PRK00178        163 TRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSR-EPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNF  241 (430)
T ss_pred             eeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCC-CceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCC
Confidence            345566543221    25788888887654554332 344667787878888776544  35799999988766555432


Q ss_pred             CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEec
Q psy5751          85 DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTI  162 (232)
Q Consensus        85 ~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~  162 (232)
                      . ......+.+|.++.|+++....+...|+.+++++...+.+...  ........+++++++||++...  ...|+.+++
T Consensus       242 ~-g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~--~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~  318 (430)
T PRK00178        242 E-GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNH--PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNV  318 (430)
T ss_pred             C-CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcccC--CCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence            2 1223577888777888765443456899999998776655433  2234456788988888887543  347999999


Q ss_pred             CCCceEEEecCCCceEEEEE--ECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751         163 RNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT--NRIESANKEGERAPSI  210 (232)
Q Consensus       163 ~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~--~~i~~~~~~g~~~~~i  210 (232)
                      ++++.+.+..........++  +++.|+++....  ..|..++..+...+.+
T Consensus       319 ~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~l  370 (430)
T PRK00178        319 NGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRIL  370 (430)
T ss_pred             CCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEc
Confidence            87766554322111122233  466777775433  2577777766554444

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.60  E-value=4.2e-05  Score=63.25  Aligned_cols=163  Identities=12%  Similarity=0.129  Sum_probs=107.2

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      ++.+.+....+|+++- ++ .|.++++.....-..+..+ ..|.++++.+.++.+|++++..+.+..+|.........+.
T Consensus        41 ~~~~s~Dgr~~yv~~r-dg-~vsviD~~~~~~v~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~  117 (369)
T PF02239_consen   41 GLKFSPDGRYLYVANR-DG-TVSVIDLATGKVVATIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIP  117 (369)
T ss_dssp             EEE-TT-SSEEEEEET-TS-EEEEEETTSSSEEEEEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred             EEEecCCCCEEEEEcC-CC-eEEEEECCcccEEEEEecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecc
Confidence            4667777788999984 45 8999999876654444444 5899999999899999999999999999987766443333


Q ss_pred             -C------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          84 -K------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        84 -~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                       .      .-.++.++...+.+. .|+.... +.++|+.++..... ...-.... ...|.+..+|+++++++.+....+
T Consensus       118 ~~~~~~~~~~~Rv~aIv~s~~~~-~fVv~lk-d~~~I~vVdy~d~~~~~~~~i~~-g~~~~D~~~dpdgry~~va~~~sn  194 (369)
T PF02239_consen  118 TGGMPVDGPESRVAAIVASPGRP-EFVVNLK-DTGEIWVVDYSDPKNLKVTTIKV-GRFPHDGGFDPDGRYFLVAANGSN  194 (369)
T ss_dssp             --EE-TTTS---EEEEEE-SSSS-EEEEEET-TTTEEEEEETTTSSCEEEEEEE---TTEEEEEE-TTSSEEEEEEGGGT
T ss_pred             cccccccccCCCceeEEecCCCC-EEEEEEc-cCCeEEEEEeccccccceeeecc-cccccccccCcccceeeecccccc
Confidence             1      122445676666444 4444433 36789999876543 22222222 568999999999888888888888


Q ss_pred             cEEEEecCCCceEEEec
Q psy5751         156 SLECMTIRNRVRRKVYS  172 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~~  172 (232)
                      .|..++....+......
T Consensus       195 ~i~viD~~~~k~v~~i~  211 (369)
T PF02239_consen  195 KIAVIDTKTGKLVALID  211 (369)
T ss_dssp             EEEEEETTTTEEEEEEE
T ss_pred             eeEEEeeccceEEEEee
Confidence            99999988766555444

...

>smart00135 LY Low-density lipoprotein-receptor YWTD domain

Probab=98.55  E-value=5e-07  Score=50.24  Aligned_cols=41  Identities=37%  Similarity=0.838  Sum_probs=36.7

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      .++..++..|.|+++|+.+++|||+|.....|.+++++|..
T Consensus         2 ~~~~~~~~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~g~~   42 (43)
T smart00135        2 TLLSEGLGHPNGLAVDWIEGRLYWTDWGLDVIEVANLDGTN   42 (43)
T ss_pred             EEEECCCCCcCEEEEeecCCEEEEEeCCCCEEEEEeCCCCC
Confidence            35556789999999999999999999999999999999864

Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=98.53  E-value=0.00021  Score=56.61  Aligned_cols=180  Identities=11%  Similarity=0.105  Sum_probs=116.6

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC--------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEE
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ--------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIE  114 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~--------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~  114 (232)
                      -....|++  .++.+++.++.-..+-..+.+-..        +..+..++-=+.+|||+.. +.--|+|..++. ...=+
T Consensus       103 idiHdia~--~~~~l~fVNT~fSCLatl~~~~SF~P~WkPpFIs~la~eDRCHLNGlA~~~-g~p~yVTa~~~sD~~~gW  179 (335)
T TIGR03032       103 IDAHDLAL--GAGRLLFVNTLFSCLATVSPDYSFVPLWKPPFISKLAPEDRCHLNGMALDD-GEPRYVTALSQSDVADGW  179 (335)
T ss_pred             cchhheee--cCCcEEEEECcceeEEEECCCCccccccCCccccccCccCceeecceeeeC-CeEEEEEEeeccCCcccc
Confidence            35666777  366788888777777777665543        1222223334678999983 556666654322 12233


Q ss_pred             EEeCCCCC-------cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEE
Q psy5751         115 WSNLDGTD-------REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKY  187 (232)
Q Consensus       115 ~~~~~g~~-------~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~l  187 (232)
                      |-......       -+++.+.  +..|.+--..  +++||++|++++++.+++++.++.+.++.....|.||++.++.+
T Consensus       180 R~~~~~gG~vidv~s~evl~~G--LsmPhSPRWh--dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~~rGL~f~G~ll  255 (335)
T TIGR03032       180 REGRRDGGCVIDIPSGEVVASG--LSMPHSPRWY--QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGFTRGLAFAGDFA  255 (335)
T ss_pred             cccccCCeEEEEeCCCCEEEcC--ccCCcCCcEe--CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCCCcccceeCCEE
Confidence            33322222       1333333  5666655555  48999999999999999999777777888788899999998888


Q ss_pred             EEEeCCCC-------------------cEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC-CCC
Q psy5751         188 YWTDWKTN-------------------RIESANKE-GERAPSIALDMMGTTYMYGIAAVPS-SCP  231 (232)
Q Consensus       188 y~td~~~~-------------------~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~-~~~  231 (232)
                      ++.-++-+                   -|..++.. |..+.-+++ .....+.|.|+|.+. .||
T Consensus       256 vVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl~tG~vv~~l~f-eg~v~EifdV~vLPg~r~P  319 (335)
T TIGR03032       256 FVGLSKLRESRVFGGLPIEERLDALGCGVAVIDLNSGDVVHWLRF-EGVIEEIYDVAVLPGVRRP  319 (335)
T ss_pred             EEEeccccCCCCcCCCchhhhhhhhcccEEEEECCCCCEEEEEEe-CCceeEEEEEEEecCCCCc
Confidence            88766432                   36667766 444555554 334778899999887 444

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.38  E-value=0.0004  Score=58.82  Aligned_cols=185  Identities=10%  Similarity=0.030  Sum_probs=114.4

Q ss_pred             CEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCCEEEEeCCC
Q psy5751          12 GQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQPKVIVSKDL   86 (232)
Q Consensus        12 ~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~   86 (232)
                      ...|+....++   .+|+.++.+|.....+.. .......+++.+.++.|+++...  ...|+..++.+...+.+.... 
T Consensus       170 ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~-~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~-  247 (429)
T PRK01742        170 RIAYVVQKNGGSQPYEVRVADYDGFNQFIVNR-SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFR-  247 (429)
T ss_pred             EEEEEEEEcCCCceEEEEEECCCCCCceEecc-CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCC-
Confidence            34466654331   378888999887544433 23356778888888888887543  347999999876655544311 


Q ss_pred             CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEEEEecCC
Q psy5751          87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLECMTIRN  164 (232)
Q Consensus        87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~~~~~~g  164 (232)
                      ..-...+.+|.+..|+++....+..+|+.+++++.....+...  .......++++++.+|+++..  +..+|+.++.++
T Consensus       248 g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~--~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~  325 (429)
T PRK01742        248 GHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSG--AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG  325 (429)
T ss_pred             CccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccC--CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            1223578888777888875432345789999887766655443  334567899999888887754  345888888887


Q ss_pred             CceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCC
Q psy5751         165 RVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       165 ~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~  205 (232)
                      ...+.+....   ...++  ++..|+++..  ..+..++..++
T Consensus       326 ~~~~~l~~~~---~~~~~SpDG~~ia~~~~--~~i~~~Dl~~g  363 (429)
T PRK01742        326 GGASLVGGRG---YSAQISADGKTLVMING--DNVVKQDLTSG  363 (429)
T ss_pred             CCeEEecCCC---CCccCCCCCCEEEEEcC--CCEEEEECCCC
Confidence            7665442111   12233  3445555432  34555665543

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=98.38  E-value=0.00022  Score=58.42  Aligned_cols=189  Identities=16%  Similarity=0.199  Sum_probs=103.9

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEee----cCC---eEEEEeCCC--Ce--EEEEeCCCCCCE
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDW----VNR---VLYWTDSQM--DT--ISMANLNDDQPK   79 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~----~~~---~ly~~d~~~--~~--I~~~~~~g~~~~   79 (232)
                      ...+.-+|.. . .++.++++|...+.+-   ...++.+.+-.    .++   .+..++...  +.  |++++.+.....
T Consensus        68 kSlIigTdK~-~-GL~VYdL~Gk~lq~~~---~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~  142 (381)
T PF02333_consen   68 KSLIIGTDKK-G-GLYVYDLDGKELQSLP---VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELT  142 (381)
T ss_dssp             G-EEEEEETT-T-EEEEEETTS-EEEEE----SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEE
T ss_pred             cceEEEEeCC-C-CEEEEcCCCcEEEeec---CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcce
Confidence            3345555554 3 5899999998765442   23444444321    111   234455542  34  445554322222


Q ss_pred             EE------EeCCCCCceEEEEe--CCCCeEEEEEcCCCCCcEEEEeC--CCCCc--EEEE-EcCCCCCcceEEEeCCCCE
Q psy5751          80 VI------VSKDLVNPRGIVVH--PYYRKLFWSDWNRSGPKIEWSNL--DGTDR--EIFL-KAADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        80 ~~------~~~~~~~p~~iavd--~~~~~ly~~d~~~~~~~I~~~~~--~g~~~--~~~~-~~~~~~~p~~l~~d~~~~~  146 (232)
                      .+      +...+..|.|+++-  +..|.+|..-.++ .+.+....+  ++...  -.++ ....-.++.|+++|...++
T Consensus       143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k-~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~  221 (381)
T PF02333_consen  143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGK-DGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGR  221 (381)
T ss_dssp             E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEET-TSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTE
T ss_pred             EcCCCCcccccccccceeeEEeecCCCCcEEEEEecC-CceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCC
Confidence            22      12356678999974  4567787765543 356666555  33321  1112 1111468999999999999


Q ss_pred             EEEEECCCCcEEEEecC--C-CceEEEec----CC-CceEEEEEE-----CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         147 LCWVDADSKSLECMTIR--N-RVRRKVYS----NC-TYPFGLSIT-----DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~--g-~~~~~~~~----~~-~~p~gla~~-----~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      ||+++... -||+++.+  + ..++.+..    .+ ....||+++     .++|.+++-+++....++..+..
T Consensus       222 LYvgEE~~-GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~  293 (381)
T PF02333_consen  222 LYVGEEDV-GIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPN  293 (381)
T ss_dssp             EEEEETTT-EEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT-
T ss_pred             EEEecCcc-EEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCC
Confidence            99999864 59999887  3 33444422    12 345699984     35899999998888888887643

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.37  E-value=0.00056  Score=53.02  Aligned_cols=214  Identities=12%  Similarity=0.024  Sum_probs=129.8

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      .+.+.+.++.|+.+.. ++ .|...+++.......+......+..+.+.+. +.++++....+.|...++........+.
T Consensus        56 ~~~~~~~~~~l~~~~~-~~-~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~  132 (289)
T cd00200          56 DVAASADGTYLASGSS-DK-TIRLWDLETGECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLR  132 (289)
T ss_pred             EEEECCCCCEEEEEcC-CC-eEEEEEcCcccceEEEeccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEec
Confidence            6777775556665554 44 6888888764332333333346778888875 4566666667889999988444333333


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      .....+..+++++.+..++....   .+.|...++............ ......+++++.+..++.+.. .+.|...+++
T Consensus       133 ~~~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-~~~i~i~d~~  207 (289)
T cd00200         133 GHTDWVNSVAFSPDGTFVASSSQ---DGTIKLWDLRTGKCVATLTGH-TGEVNSVAFSPDGEKLLSSSS-DGTIKLWDLS  207 (289)
T ss_pred             cCCCcEEEEEEcCcCCEEEEEcC---CCcEEEEEccccccceeEecC-ccccceEEECCCcCEEEEecC-CCcEEEEECC
Confidence            34456789999986454444431   346888887644333333322 346789999998667777755 7888888887


Q ss_pred             CCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751         164 NRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       164 g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ........ ........+++. ++.++++....+.|..++... .....+.   .....+..+++.++
T Consensus       208 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~---~~~~~i~~~~~~~~  272 (289)
T cd00200         208 TGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS---GHTNSVTSLAWSPD  272 (289)
T ss_pred             CCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc---ccCCcEEEEEECCC
Confidence            54433333 233355677775 356666666578888888763 3333332   22334555665543

>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]

Probab=98.34  E-value=0.00023  Score=58.74  Aligned_cols=139  Identities=15%  Similarity=0.128  Sum_probs=88.4

Q ss_pred             CCceEEEEeCCCCeEEEEEcCC-----------CCCcEEEEeC--------CCCCcEEEEEcCCCCCcceEEEeCCCCEE
Q psy5751          87 VNPRGIVVHPYYRKLFWSDWNR-----------SGPKIEWSNL--------DGTDREIFLKAADLKLPNSLAVDFRTDEL  147 (232)
Q Consensus        87 ~~p~~iavd~~~~~ly~~d~~~-----------~~~~I~~~~~--------~g~~~~~~~~~~~~~~p~~l~~d~~~~~L  147 (232)
                      ..-..|+++| +|+||++-...           ..++|.+.+.        ++...++....  +.+|.|+++++.++.|
T Consensus       177 H~g~~l~f~p-DG~Lyvs~G~~~~~~~aq~~~~~~Gk~~r~~~a~~~~~d~p~~~~~i~s~G--~RN~qGl~w~P~tg~L  253 (399)
T COG2133         177 HFGGRLVFGP-DGKLYVTTGSNGDPALAQDNVSLAGKVLRIDRAGIIPADNPFPNSEIWSYG--HRNPQGLAWHPVTGAL  253 (399)
T ss_pred             cCcccEEECC-CCcEEEEeCCCCCcccccCccccccceeeeccCcccccCCCCCCcceEEec--cCCccceeecCCCCcE
Confidence            3456899998 66999985433           1455555543        34445555554  8899999999999999


Q ss_pred             EEEECCCCcE------EEEec---------------CCCce--EEEec----------CCCceEEEEEEC--------CE
Q psy5751         148 CWVDADSKSL------ECMTI---------------RNRVR--RKVYS----------NCTYPFGLSITD--------EK  186 (232)
Q Consensus       148 y~~d~~~~~i------~~~~~---------------~g~~~--~~~~~----------~~~~p~gla~~~--------~~  186 (232)
                      |.++.+...+      ..+..               +|...  -....          --..|.|++++.        +.
T Consensus       254 w~~e~g~d~~~~~Deln~i~~G~nYGWP~~~~G~~~~g~~~~~~~~~~~~~~p~~~~~~h~ApsGmaFy~G~~fP~~r~~  333 (399)
T COG2133         254 WTTEHGPDALRGPDELNSIRPGKNYGWPYAYFGQNYDGRAIPDGTVVAGAIQPVYTWAPHIAPSGMAFYTGDLFPAYRGD  333 (399)
T ss_pred             EEEecCCCcccCcccccccccCCccCCceeccCcccCccccCCCcccccccCCceeeccccccceeEEecCCcCccccCc
Confidence            9999876322      22111               11100  00000          123367999874        68


Q ss_pred             EEEEeCCCCcEEEEeCCCC---CcceEEeccCCcceeEEEEEEcCC
Q psy5751         187 YYWTDWKTNRIESANKEGE---RAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       187 ly~td~~~~~i~~~~~~g~---~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      |+++..+++.+.+++++|.   ..+.+.....+ ..|.+|++.++.
T Consensus       334 lfV~~hgsw~~~~~~~~g~~~~~~~~fl~~d~~-gR~~dV~v~~DG  378 (399)
T COG2133         334 LFVGAHGSWPVLRLRPDGNYKVVLTGFLSGDLG-GRPRDVAVAPDG  378 (399)
T ss_pred             EEEEeecceeEEEeccCCCcceEEEEEEecCCC-CcccceEECCCC
Confidence            9999999999999999987   22222222122 688998888764

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=98.32  E-value=0.00075  Score=52.30  Aligned_cols=188  Identities=15%  Similarity=0.092  Sum_probs=113.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++.+++. +.++++...++ .|..+++........+......+..+++++.+..++ +....+.|...++........+
T Consensus        97 ~~~~~~~~-~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~i~i~d~~~~~~~~~~  173 (289)
T cd00200          97 SSVAFSPD-GRILSSSSRDK-TIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVA-SSSQDGTIKLWDLRTGKCVATL  173 (289)
T ss_pred             EEEEEcCC-CCEEEEecCCC-eEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEE-EEcCCCcEEEEEccccccceeE
Confidence            46777775 45555555455 788888874333233333334678888988645444 5445678999998755444444


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      .........+++++.+..++.+..   .+.|...++............ ......+++++. +.++++-...+.|...++
T Consensus       174 ~~~~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~~~~~~~~i~i~~~  248 (289)
T cd00200         174 TGHTGEVNSVAFSPDGEKLLSSSS---DGTIKLWDLSTGKCLGTLRGH-ENGVNSVAFSPD-GYLLASGSEDGTIRVWDL  248 (289)
T ss_pred             ecCccccceEEECCCcCEEEEecC---CCcEEEEECCCCceecchhhc-CCceEEEEEcCC-CcEEEEEcCCCcEEEEEc
Confidence            434446788999985556766654   456888887654333222121 336788999987 666666666788888888


Q ss_pred             CCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEE
Q psy5751         163 RNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIE  198 (232)
Q Consensus       163 ~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~  198 (232)
                      +.... ..+......+.++++. ++..+++-..++.+.
T Consensus       249 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  286 (289)
T cd00200         249 RTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIR  286 (289)
T ss_pred             CCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEE
Confidence            75433 2222233345677775 334445444445443

>KOG0279|consensus

Probab=98.30  E-value=0.00085  Score=51.91  Aligned_cols=204  Identities=12%  Similarity=0.069  Sum_probs=139.8

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK   84 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~   84 (232)
                      ++..+ ++..+++---++ .++..++.+......+...-....++++...++.| ++.+....|...+.-|...-.+.+.
T Consensus        69 v~~s~-dg~~alS~swD~-~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qi-vSGSrDkTiklwnt~g~ck~t~~~~  145 (315)
T KOG0279|consen   69 VVLSS-DGNFALSASWDG-TLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI-VSGSRDKTIKLWNTLGVCKYTIHED  145 (315)
T ss_pred             eEEcc-CCceEEeccccc-eEEEEEecCCcEEEEEEecCCceEEEEecCCCcee-ecCCCcceeeeeeecccEEEEEecC
Confidence            33444 444444444445 68888998765545555555788999999966665 5888888899999888776666664


Q ss_pred             C-CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          85 D-LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        85 ~-~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      . -.-..-+.+.|.....++...+. ...+...++++-......... -...+.++++++ |.|+-+-...+.++-.+++
T Consensus       146 ~~~~WVscvrfsP~~~~p~Ivs~s~-DktvKvWnl~~~~l~~~~~gh-~~~v~t~~vSpD-GslcasGgkdg~~~LwdL~  222 (315)
T KOG0279|consen  146 SHREWVSCVRFSPNESNPIIVSASW-DKTVKVWNLRNCQLRTTFIGH-SGYVNTVTVSPD-GSLCASGGKDGEAMLWDLN  222 (315)
T ss_pred             CCcCcEEEEEEcCCCCCcEEEEccC-CceEEEEccCCcchhhccccc-cccEEEEEECCC-CCEEecCCCCceEEEEEcc
Confidence            4 56677888998665666655432 345777888877665555443 567889999998 7777776667899999998


Q ss_pred             CCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEecc
Q psy5751         164 NRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDM  214 (232)
Q Consensus       164 g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~  214 (232)
                      -++.-.-++.....+++++-.++.+.+-.....|...+.+ +..+..+.+..
T Consensus       223 ~~k~lysl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~  274 (315)
T KOG0279|consen  223 EGKNLYSLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDG  274 (315)
T ss_pred             CCceeEeccCCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccc
Confidence            6655333445566678888777877777666667778877 34444554433

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.28  E-value=0.00031  Score=60.86  Aligned_cols=191  Identities=13%  Similarity=0.031  Sum_probs=117.0

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEe-------------------ecCCeEEEEeCCCCeEEE
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFD-------------------WVNRVLYWTDSQMDTISM   70 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d-------------------~~~~~ly~~d~~~~~I~~   70 (232)
                      ...||+-|..+. ||.|++++--...+++. ++.....|+.+.                   +.++.++.++...+.+.+
T Consensus       141 Gr~~findk~n~-Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv  219 (635)
T PRK02888        141 GRYLFINDKANT-RVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA  219 (635)
T ss_pred             eeEEEEecCCCc-ceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence            456666666666 99999998654444443 334455555544                   233344444444456677


Q ss_pred             EeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC-------------------------------------CcE
Q psy5751          71 ANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG-------------------------------------PKI  113 (232)
Q Consensus        71 ~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~-------------------------------------~~I  113 (232)
                      +|.+.....--+. -..+|..+++++.++++|++..+.+.                                     ++|
T Consensus       220 ID~etmeV~~qV~-Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V  298 (635)
T PRK02888        220 VDAETMEVAWQVM-VDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKV  298 (635)
T ss_pred             EECccceEEEEEE-eCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEE
Confidence            7766433211111 12388999999988999998532210                                     112


Q ss_pred             EEEeCCCC---CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce---------EEE---ecCCCceE
Q psy5751         114 EWSNLDGT---DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR---------RKV---YSNCTYPF  178 (232)
Q Consensus       114 ~~~~~~g~---~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~---------~~~---~~~~~~p~  178 (232)
                      ..++....   ...++..-..-..|.|+.+++++.++|++....+.+..+++...+.         ..+   .+....|.
T Consensus       299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL  378 (635)
T PRK02888        299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL  378 (635)
T ss_pred             EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc
Confidence            22222110   0111111111468999999999999999998899999999875331         222   22456788


Q ss_pred             EEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         179 GLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       179 gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..+++ .|+.|.|-+-...|...+.+
T Consensus       379 HTaFDg~G~aytslf~dsqv~kwn~~  404 (635)
T PRK02888        379 HTAFDGRGNAYTTLFLDSQIVKWNIE  404 (635)
T ss_pred             eEEECCCCCEEEeEeecceeEEEehH
Confidence            88887 56899998888888888754

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=98.21  E-value=0.0014  Score=51.01  Aligned_cols=188  Identities=13%  Similarity=0.038  Sum_probs=120.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCcee-EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVE-DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~-~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|+.|.. ++.||-+--..+ ++|.+++++..... +.-.+...-.+|+++-  ++.||-.-...+..++.|.+......
T Consensus        48 QGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~tl~~~~  124 (264)
T PF05096_consen   48 QGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGTGFVYDPNTLKKIG  124 (264)
T ss_dssp             EEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred             ccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecCCeEEEEccccceEEE
Confidence            4788853 689998875554 68999999965532 3333444577899988  68999999999999999998765444


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE--EEcC--CCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF--LKAA--DLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~--~~~~--~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      -+. -....+||+-|  +..|+.+|.   ..+|+..+...-...--  +...  .+..-|=|..-  +|.||=--..+++
T Consensus       125 ~~~-y~~EGWGLt~d--g~~Li~SDG---S~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i--~G~IyANVW~td~  196 (264)
T PF05096_consen  125 TFP-YPGEGWGLTSD--GKRLIMSDG---SSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI--NGKIYANVWQTDR  196 (264)
T ss_dssp             EEE--SSS--EEEEC--SSCEEEE-S---SSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE--TTEEEEEETTSSE
T ss_pred             EEe-cCCcceEEEcC--CCEEEEECC---ccceEEECCcccceEEEEEEEECCEECCCcEeEEEE--cCEEEEEeCCCCe
Confidence            444 23578999987  889999995   46788888765432221  2211  13333444443  5888877788999


Q ss_pred             EEEEecCCCceEEEec--C--------------CCceEEEEEE--CCEEEEEeCCCCcEEEEe
Q psy5751         157 LECMTIRNRVRRKVYS--N--------------CTYPFGLSIT--DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~--~--------------~~~p~gla~~--~~~ly~td~~~~~i~~~~  201 (232)
                      |.++++..+.+..+..  .              ..-.+|||++  .+++|+|--.=..++.+.
T Consensus       197 I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp~lyeV~  259 (264)
T PF05096_consen  197 IVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWPKLYEVK  259 (264)
T ss_dssp             EEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-SEEEEEE
T ss_pred             EEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCCceEEEE
Confidence            9999999887766532  1              1225799996  689999854334555543

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.21  E-value=0.0019  Score=54.72  Aligned_cols=166  Identities=10%  Similarity=0.091  Sum_probs=103.1

Q ss_pred             EEEEeCCCCEEEEEEcC-CCCcEEEE--EcCC---CceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCC
Q psy5751           4 GITVDCVEGQVYYSSVA-DKSSIKRA--HLDG---KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLND   75 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~-~~~~i~~~--~~~g---~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g   75 (232)
                      +..|.+..++|.++... ..+.++..  ++++   .....+...........++.+.++.|+++...  ...|+++++++
T Consensus       235 ~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~  314 (428)
T PRK01029        235 MPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDP  314 (428)
T ss_pred             ceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcc
Confidence            45677877777766432 22256654  3332   22223333222233456888878877776543  34688888764


Q ss_pred             CC--CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          76 DQ--PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        76 ~~--~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ..  .+.+.. ........+.+|.++.|+++....+..+|+.+++++...+.+...  .......+++++++.|+++...
T Consensus       315 ~g~~~~~lt~-~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~--~~~~~~p~wSpDG~~L~f~~~~  391 (428)
T PRK01029        315 EGQSPRLLTK-KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTS--PENKESPSWAIDSLHLVYSAGN  391 (428)
T ss_pred             cccceEEecc-CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCC--CCCccceEECCCCCEEEEEECC
Confidence            32  333322 223345677898888888876544456799999998877666543  2344668889988888887543


Q ss_pred             --CCcEEEEecCCCceEEEec
Q psy5751         154 --SKSLECMTIRNRVRRKVYS  172 (232)
Q Consensus       154 --~~~i~~~~~~g~~~~~~~~  172 (232)
                        ...|+.+++++++.+.+..
T Consensus       392 ~g~~~L~~vdl~~g~~~~Lt~  412 (428)
T PRK01029        392 SNESELYLISLITKKTRKIVI  412 (428)
T ss_pred             CCCceEEEEECCCCCEEEeec
Confidence              4579999999887766643

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=98.21  E-value=0.00022  Score=56.50  Aligned_cols=55  Identities=15%  Similarity=0.160  Sum_probs=43.3

Q ss_pred             EEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEE
Q psy5751         168 RKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAV  226 (232)
Q Consensus       168 ~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~  226 (232)
                      +++++++..|.+-.+++|+||++|++.+++.+++++ |....+..    .++.|.|++..
T Consensus       196 evl~~GLsmPhSPRWhdgrLwvldsgtGev~~vD~~~G~~e~Va~----vpG~~rGL~f~  251 (335)
T TIGR03032       196 EVVASGLSMPHSPRWYQGKLWLLNSGRGELGYVDPQAGKFQPVAF----LPGFTRGLAFA  251 (335)
T ss_pred             CEEEcCccCCcCCcEeCCeEEEEECCCCEEEEEcCCCCcEEEEEE----CCCCCccccee
Confidence            456778889999999999999999999999999998 55444433    35567777654

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.19  E-value=0.0018  Score=52.18  Aligned_cols=200  Identities=12%  Similarity=0.078  Sum_probs=121.0

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-   83 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-   83 (232)
                      +.+...+.++|+.|+.....|.++++.....-..    +..|.+.-+.+..+.=|.+-...+++..+.++.......-. 
T Consensus       100 ~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~e----i~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t  175 (342)
T PF06433_consen  100 FALSADGKFLYVQNFTPATSVTVVDLAAKKVVGE----IDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKST  175 (342)
T ss_dssp             EEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEE----EEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEE
T ss_pred             eEEccCCcEEEEEccCCCCeEEEEECCCCceeee----ecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEeec
Confidence            4566778999999998776899999997664222    23344444444343345677788999988887544332221 


Q ss_pred             ---CCCCCc--eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcc---eEEEeCCCCEE
Q psy5751          84 ---KDLVNP--RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPN---SLAVDFRTDEL  147 (232)
Q Consensus        84 ---~~~~~p--~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~---~l~~d~~~~~L  147 (232)
                         ....+|  ..-+....++.+||...   .++|+.+++.+...+....-.        .-..|.   -+++++..++|
T Consensus       176 ~~F~~~~dp~f~~~~~~~~~~~~~F~Sy---~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rl  252 (342)
T PF06433_consen  176 KVFDPDDDPLFEHPAYSRDGGRLYFVSY---EGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRL  252 (342)
T ss_dssp             EESSTTTS-B-S--EEETTTTEEEEEBT---TSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEE
T ss_pred             cccCCCCcccccccceECCCCeEEEEec---CCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeE
Confidence               122233  12233444678888775   467999999988765544321        122343   48999999999


Q ss_pred             EEEECC---------CCcEEEEecCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751         148 CWVDAD---------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKE-GERAPSIA  211 (232)
Q Consensus       148 y~~d~~---------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~-g~~~~~i~  211 (232)
                      |+.-..         ...||.+|+...++-.-...-....+|++.  +. .||-++...+.+..++.. |+..+.+.
T Consensus       253 yvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~  329 (342)
T PF06433_consen  253 YVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE  329 (342)
T ss_dssp             EEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred             EEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence            998431         237999999876552222211223377773  32 677777777889989887 55555554

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]

Probab=98.18  E-value=0.00066  Score=56.09  Aligned_cols=160  Identities=16%  Similarity=0.089  Sum_probs=100.7

Q ss_pred             CCccEEEEeecCCeEEEEeCCC-------------CeEEEEeCCCCC-------CEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQM-------------DTISMANLNDDQ-------PKVIVSKDLVNPRGIVVHPYYRKLFW  103 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~-------------~~I~~~~~~g~~-------~~~~~~~~~~~p~~iavd~~~~~ly~  103 (232)
                      ..-..|++++.+ .||++-..+             +.|.+.+.++..       ...+......+|.|++.+|.+|.||.
T Consensus       177 H~g~~l~f~pDG-~Lyvs~G~~~~~~~aq~~~~~~Gk~~r~~~a~~~~~d~p~~~~~i~s~G~RN~qGl~w~P~tg~Lw~  255 (399)
T COG2133         177 HFGGRLVFGPDG-KLYVTTGSNGDPALAQDNVSLAGKVLRIDRAGIIPADNPFPNSEIWSYGHRNPQGLAWHPVTGALWT  255 (399)
T ss_pred             cCcccEEECCCC-cEEEEeCCCCCcccccCccccccceeeeccCcccccCCCCCCcceEEeccCCccceeecCCCCcEEE
Confidence            345679999965 899985332             444455444432       12344457889999999999999999


Q ss_pred             EEcCCCCC----cEEEEe---------------CCCC------CcEEEEEcC----CCCCcceEEEeCCC------CEEE
Q psy5751         104 SDWNRSGP----KIEWSN---------------LDGT------DREIFLKAA----DLKLPNSLAVDFRT------DELC  148 (232)
Q Consensus       104 ~d~~~~~~----~I~~~~---------------~~g~------~~~~~~~~~----~~~~p~~l~~d~~~------~~Ly  148 (232)
                      ++.+++.-    .+....               .++.      .........    ....|.||+|-..+      +.||
T Consensus       256 ~e~g~d~~~~~Deln~i~~G~nYGWP~~~~G~~~~g~~~~~~~~~~~~~~p~~~~~~h~ApsGmaFy~G~~fP~~r~~lf  335 (399)
T COG2133         256 TEHGPDALRGPDELNSIRPGKNYGWPYAYFGQNYDGRAIPDGTVVAGAIQPVYTWAPHIAPSGMAFYTGDLFPAYRGDLF  335 (399)
T ss_pred             EecCCCcccCcccccccccCCccCCceeccCcccCccccCCCcccccccCCceeeccccccceeEEecCCcCccccCcEE
Confidence            99765210    011110               0111      000000000    02356899998643      6899


Q ss_pred             EEECCCCcEEEEecCCCceEE---Eec--CCCceEEEEEE-CCEEEEEeCC-CCcEEEEeCCC
Q psy5751         149 WVDADSKSLECMTIRNRVRRK---VYS--NCTYPFGLSIT-DEKYYWTDWK-TNRIESANKEG  204 (232)
Q Consensus       149 ~~d~~~~~i~~~~~~g~~~~~---~~~--~~~~p~gla~~-~~~ly~td~~-~~~i~~~~~~g  204 (232)
                      ++..+.-.+.+++++|..+..   ++.  ....|.++++. +|.||+++-. +++|+|+.+.+
T Consensus       336 V~~hgsw~~~~~~~~g~~~~~~~~fl~~d~~gR~~dV~v~~DGallv~~D~~~g~i~Rv~~~~  398 (399)
T COG2133         336 VGAHGSWPVLRLRPDGNYKVVLTGFLSGDLGGRPRDVAVAPDGALLVLTDQGDGRILRVSYAG  398 (399)
T ss_pred             EEeecceeEEEeccCCCcceEEEEEEecCCCCcccceEECCCCeEEEeecCCCCeEEEecCCC
Confidence            998877778888888873322   222  33689999985 8888888655 67999998764

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.03  E-value=0.0022  Score=50.29  Aligned_cols=182  Identities=16%  Similarity=0.081  Sum_probs=119.4

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE-EEcCCCCCcEEEEeCCCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW-SDWNRSGPKIEWSNLDGTD  122 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~-~d~~~~~~~I~~~~~~g~~  122 (232)
                      ....+|++++..+.||.+-..--.|...+.+|...+.+--..+.+|.+|+.-  ++..|+ ++-.  ..+++....+...
T Consensus        86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyi--g~n~fvi~dER--~~~l~~~~vd~~t  161 (316)
T COG3204          86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYI--GGNQFVIVDER--DRALYLFTVDADT  161 (316)
T ss_pred             ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEe--cCCEEEEEehh--cceEEEEEEcCCc
Confidence            4589999999999999877666789999999988777766788999999987  344444 4433  3445555444332


Q ss_pred             cE-------EEEEcC--CCCCcceEEEeCCCCEEEEEECCCC-cEEEEecCCCc--eEEEec-------CCCceEEEEEE
Q psy5751         123 RE-------IFLKAA--DLKLPNSLAVDFRTDELCWVDADSK-SLECMTIRNRV--RRKVYS-------NCTYPFGLSIT  183 (232)
Q Consensus       123 ~~-------~~~~~~--~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~~~~~~g~~--~~~~~~-------~~~~p~gla~~  183 (232)
                      ..       +-+...  --..-.|+|-|+.+++||++...+. .|+.+...-..  ......       .+....|+.++
T Consensus       162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~  241 (316)
T COG3204         162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN  241 (316)
T ss_pred             cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence            11       111111  0123469999999999999987665 56666533211  111100       12223477776


Q ss_pred             --CCEEEEEeCCCCcEEEEeCCCCCcceEEeccC--C----cceeEEEEEEcCC
Q psy5751         184 --DEKYYWTDWKTNRIESANKEGERAPSIALDMM--G----TTYMYGIAAVPSS  229 (232)
Q Consensus       184 --~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~--~----~~~p~gi~~~~~~  229 (232)
                        .+.|++---.++.+..++..|.....+.+...  +    .+.+=|||+..++
T Consensus       242 ~~~~~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g  295 (316)
T COG3204         242 AITNSLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDG  295 (316)
T ss_pred             CCCCcEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCC
Confidence              67888887778999999999988776665431  1    3457788887764

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=97.96  E-value=2.6e-05  Score=38.95  Aligned_cols=28  Identities=18%  Similarity=0.413  Sum_probs=24.2

Q ss_pred             CCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751         132 LKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus       132 ~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +..|.||++++ ++.||++|.++++|.++
T Consensus         1 f~~P~gvav~~-~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    1 FNYPHGVAVDS-DGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             BSSEEEEEEET-TSEEEEEECCCTEEEEE
T ss_pred             CcCCcEEEEeC-CCCEEEEECCCCEEEEC
Confidence            35799999995 59999999999999864

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>KOG4499|consensus

Probab=97.84  E-value=0.0022  Score=48.79  Aligned_cols=107  Identities=18%  Similarity=0.243  Sum_probs=75.9

Q ss_pred             CCCCCccEEEEeecCCeEEEEeCCCCeEEEEe--CCCCC---CEEEEe--C----CCCCceEEEEeCCCCeEEEEEcCCC
Q psy5751          41 TNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN--LNDDQ---PKVIVS--K----DLVNPRGIVVHPYYRKLFWSDWNRS  109 (232)
Q Consensus        41 ~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~--~~g~~---~~~~~~--~----~~~~p~~iavd~~~~~ly~~d~~~~  109 (232)
                      ..+.-++||+-|...+..|++|+.+..|-..+  ..+..   +++++.  .    .-..|.||+||. .|.||++-++  
T Consensus       155 ~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~-eG~L~Va~~n--  231 (310)
T KOG4499|consen  155 NCVGISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDT-EGNLYVATFN--  231 (310)
T ss_pred             hhccCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEcc-CCcEEEEEec--
Confidence            45668899999998999999999999996555  44432   566665  1    234689999997 8999999998  


Q ss_pred             CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-CEEEEEE
Q psy5751         110 GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-DELCWVD  151 (232)
Q Consensus       110 ~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-~~Ly~~d  151 (232)
                      .++|.++++....+..-+.-+ -.+....+|--.+ +.||++-
T Consensus       232 g~~V~~~dp~tGK~L~eiklP-t~qitsccFgGkn~d~~yvT~  273 (310)
T KOG4499|consen  232 GGTVQKVDPTTGKILLEIKLP-TPQITSCCFGGKNLDILYVTT  273 (310)
T ss_pred             CcEEEEECCCCCcEEEEEEcC-CCceEEEEecCCCccEEEEEe
Confidence            578999988766544333322 3455667766543 4667764

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=97.75  E-value=0.00011  Score=36.64  Aligned_cols=28  Identities=21%  Similarity=0.382  Sum_probs=24.3

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEE
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMA   71 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~   71 (232)
                      +..|.||++++ ++.||++|..+++|.+.
T Consensus         1 f~~P~gvav~~-~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    1 FNYPHGVAVDS-DGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             BSSEEEEEEET-TSEEEEEECCCTEEEEE
T ss_pred             CcCCcEEEEeC-CCCEEEEECCCCEEEEC
Confidence            35799999995 89999999999999863

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.73  E-value=0.0028  Score=55.15  Aligned_cols=148  Identities=9%  Similarity=0.070  Sum_probs=93.4

Q ss_pred             CCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEe--CCCCeEEEEEc-----C----------CCCCcEEEE
Q psy5751          55 NRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPRGIVVH--PYYRKLFWSDW-----N----------RSGPKIEWS  116 (232)
Q Consensus        55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd--~~~~~ly~~d~-----~----------~~~~~I~~~  116 (232)
                      ++.||+-|..+.||-+++++.-.+..++. .+.....|++..  |.++++|....     .          .-.+.+..+
T Consensus       141 Gr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvI  220 (635)
T PRK02888        141 GRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAV  220 (635)
T ss_pred             eeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEE
Confidence            68899999999999999999887776666 555566677765  55565554321     0          001222233


Q ss_pred             eCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC---------------------------------------CcE
Q psy5751         117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS---------------------------------------KSL  157 (232)
Q Consensus       117 ~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~---------------------------------------~~i  157 (232)
                      +.+  ..++..+-.--..|..++++++++++|++....                                       ++|
T Consensus       221 D~e--tmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V  298 (635)
T PRK02888        221 DAE--TMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKV  298 (635)
T ss_pred             ECc--cceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEE
Confidence            222  222222211134789999999999999994211                                       223


Q ss_pred             EEEecCC-----CceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCC
Q psy5751         158 ECMTIRN-----RVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       158 ~~~~~~g-----~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ..+|...     ........-...|+|+++  ++.++|++...++.+..++...
T Consensus       299 ~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k  352 (635)
T PRK02888        299 PVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRK  352 (635)
T ss_pred             EEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence            3333332     111222335677999998  5789999999999999999764

>KOG0291|consensus

Probab=97.62  E-value=0.041  Score=48.53  Aligned_cols=199  Identities=12%  Similarity=0.053  Sum_probs=124.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      .++.|....+.|+ +...++ ++...++. ..+.++...+....-..+|+|+.+..+.......-.|++.++.......+
T Consensus       396 t~v~f~~~g~~ll-ssSLDG-tVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDi  473 (893)
T KOG0291|consen  396 TAVQFTARGNVLL-SSSLDG-TVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDI  473 (893)
T ss_pred             EEEEEEecCCEEE-EeecCC-eEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeeh
Confidence            5777887555554 444455 68888887 45566666666667789999996666665566667899999988877777


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      +..+-.-..+++++|.+..|+-..|...   |.+.++-...  .+.+-.   -.-.-++++.|++..|.++-. .+.|.-
T Consensus       474 LsGHEgPVs~l~f~~~~~~LaS~SWDkT---VRiW~if~s~~~vEtl~i---~sdvl~vsfrPdG~elaVaTl-dgqItf  546 (893)
T KOG0291|consen  474 LSGHEGPVSGLSFSPDGSLLASGSWDKT---VRIWDIFSSSGTVETLEI---RSDVLAVSFRPDGKELAVATL-DGQITF  546 (893)
T ss_pred             hcCCCCcceeeEEccccCeEEeccccce---EEEEEeeccCceeeeEee---ccceeEEEEcCCCCeEEEEEe-cceEEE
Confidence            7655545578999998888888888753   5555555443  333322   234678999999999988844 333333


Q ss_pred             Eec---------CC------Cce--EEE-ec---CCCceEEEEE-ECCEEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751         160 MTI---------RN------RVR--RKV-YS---NCTYPFGLSI-TDEKYYWTDWKTNRIESANKE-GERAPSI  210 (232)
Q Consensus       160 ~~~---------~g------~~~--~~~-~~---~~~~p~gla~-~~~~ly~td~~~~~i~~~~~~-g~~~~~i  210 (232)
                      .+.         +|      +..  ..+ ++   ....-..|.+ ++|.+..+-..++.|...+-. +-.++.+
T Consensus       547 ~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkf  620 (893)
T KOG0291|consen  547 FDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKF  620 (893)
T ss_pred             EEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeE
Confidence            333         21      111  111 11   1222335666 477777776667766666654 3344433

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.61  E-value=0.021  Score=44.98  Aligned_cols=175  Identities=11%  Similarity=0.159  Sum_probs=110.2

Q ss_pred             CCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CC-CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE-e--
Q psy5751           9 CVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NI-RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV-S--   83 (232)
Q Consensus         9 ~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~-~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~--   83 (232)
                      -.++..|++|...+  |..+++..-...++... +. ....++.+.  ++..|++|-..+ +..+|+.....-.+. .  
T Consensus        94 vse~yvyvad~ssG--L~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadlddg-fLivdvsdpssP~lagrya  168 (370)
T COG5276          94 VSEEYVYVADWSSG--LRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDDG-FLIVDVSDPSSPQLAGRYA  168 (370)
T ss_pred             ecccEEEEEcCCCc--eEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccCc-EEEEECCCCCCceeeeeec
Confidence            35789999997766  88888876543333321 22 233444444  799999997644 555666554432222 2  


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      ........++++  +++-|++.++.+   +...+.......+++..- -..|.--++....++.|.++...+ +..++.+
T Consensus       169 ~~~~d~~~v~IS--Gn~AYvA~~d~G---L~ivDVSnp~sPvli~~~-n~g~g~~sv~vsdnr~y~vvy~eg-vlivd~s  241 (370)
T COG5276         169 LPGGDTHDVAIS--GNYAYVAWRDGG---LTIVDVSNPHSPVLIGSY-NTGPGTYSVSVSDNRAYLVVYDEG-VLIVDVS  241 (370)
T ss_pred             cCCCCceeEEEe--cCeEEEEEeCCC---eEEEEccCCCCCeEEEEE-ecCCceEEEEecCCeeEEEEcccc-eEEEecC
Confidence            233344688998  899999987743   666666555555555432 234444444454579999987665 6677778


Q ss_pred             CCceEEEe-c-CCCceEEE---EEECCEEEEEeCCCC
Q psy5751         164 NRVRRKVY-S-NCTYPFGL---SITDEKYYWTDWKTN  195 (232)
Q Consensus       164 g~~~~~~~-~-~~~~p~gl---a~~~~~ly~td~~~~  195 (232)
                      +....++. + ..+.|.++   .+-+++.|+++...+
T Consensus       242 ~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~g  278 (370)
T COG5276         242 GPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKG  278 (370)
T ss_pred             CCCCceEeeccccCCcccccceecccceeeeeccccC
Confidence            77654443 2 55556655   677999999998765

>KOG0291|consensus

Probab=97.54  E-value=0.054  Score=47.79  Aligned_cols=163  Identities=13%  Similarity=0.083  Sum_probs=107.2

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CC
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GT  121 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~  121 (232)
                      ......+++.+.++ +..|....+.|-+.|.....+-+.+.++.+...++.+...+..|+-+...   +.+...++. ..
T Consensus       350 ~~~i~~l~YSpDgq-~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLD---GtVRAwDlkRYr  425 (893)
T KOG0291|consen  350 SDRITSLAYSPDGQ-LIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLD---GTVRAWDLKRYR  425 (893)
T ss_pred             ccceeeEEECCCCc-EEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecC---CeEEeeeecccc
Confidence            56778899988655 55688888999999999988888888787788888888644444444332   345555553 23


Q ss_pred             CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceE-EEEEE--CCEEEEEeCCCCcEE
Q psy5751         122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPF-GLSIT--DEKYYWTDWKTNRIE  198 (232)
Q Consensus       122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~-gla~~--~~~ly~td~~~~~i~  198 (232)
                      +-+++.... -.+-+.+++|+.+.-++-.....-.|...++..++.-.++++-..|. ++++.  ...|+-.-| .+.|.
T Consensus       426 NfRTft~P~-p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SW-DkTVR  503 (893)
T KOG0291|consen  426 NFRTFTSPE-PIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSW-DKTVR  503 (893)
T ss_pred             eeeeecCCC-ceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccc-cceEE
Confidence            444444433 44568999999855554444444578888888777666677666664 67773  444544455 46677


Q ss_pred             EEeCCCC--CcceEE
Q psy5751         199 SANKEGE--RAPSIA  211 (232)
Q Consensus       199 ~~~~~g~--~~~~i~  211 (232)
                      .-+-.++  ..+++.
T Consensus       504 iW~if~s~~~vEtl~  518 (893)
T KOG0291|consen  504 IWDIFSSSGTVETLE  518 (893)
T ss_pred             EEEeeccCceeeeEe
Confidence            6666654  444443

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.46  E-value=0.053  Score=45.88  Aligned_cols=153  Identities=11%  Similarity=0.063  Sum_probs=96.5

Q ss_pred             EeCCCCEEEEEEcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEE
Q psy5751           7 VDCVEGQVYYSSVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIV   82 (232)
Q Consensus         7 ~d~~~~~ly~~d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~   82 (232)
                      +.+....+.+.....+  ++++..+++....+.++... ..-...++.+.+++|.++...+  -.|+.+|++++....+.
T Consensus       200 ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~-g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt  278 (425)
T COG0823         200 WSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFN-GNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLT  278 (425)
T ss_pred             cCcCCCceEEEEEecCCCceEEEEeccCCccceeeccC-CccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecc
Confidence            3344455544444333  35888888876665565532 2223345555577777776554  46999999998855544


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc--EEEE
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS--LECM  160 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~--i~~~  160 (232)
                      + ....-..-.+.|.+..|+++....+..+|++++++|...+.+...  ......-.+++++.+|-+.....+.  |...
T Consensus       279 ~-~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~--~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~  355 (425)
T COG0823         279 N-GFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFS--GGGNSNPVWSPDGDKIVFESSSGGQWDIDKN  355 (425)
T ss_pred             c-CCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeecc--CCCCcCccCCCCCCEEEEEeccCCceeeEEe
Confidence            3 111112445777788999887766788999999999988766655  3444456677877777666643344  5555


Q ss_pred             ecC
Q psy5751         161 TIR  163 (232)
Q Consensus       161 ~~~  163 (232)
                      ++.
T Consensus       356 ~~~  358 (425)
T COG0823         356 DLA  358 (425)
T ss_pred             ccC
Confidence            554

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.39  E-value=0.021  Score=47.05  Aligned_cols=159  Identities=11%  Similarity=0.119  Sum_probs=87.8

Q ss_pred             CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC-CCCCce
Q psy5751          12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK-DLVNPR   90 (232)
Q Consensus        12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~   90 (232)
                      ..||.++..++..++.+++.......+....-....|..+.+.++.||+.... ..+.++++++...+.+..- ..-...
T Consensus        49 kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-~~l~~vdL~T~e~~~vy~~p~~~~g~  127 (386)
T PF14583_consen   49 KLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-RSLRRVDLDTLEERVVYEVPDDWKGY  127 (386)
T ss_dssp             EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT-TEEEEEETTT--EEEEEE--TTEEEE
T ss_pred             EEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC-CeEEEEECCcCcEEEEEECCcccccc
Confidence            45566675554589999999877655544322333456666778888765433 5899999999877666651 111112


Q ss_pred             EEEEeCCCCeEEEEE------c--------------CCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-CEEEE
Q psy5751          91 GIVVHPYYRKLFWSD------W--------------NRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-DELCW  149 (232)
Q Consensus        91 ~iavd~~~~~ly~~d------~--------------~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-~~Ly~  149 (232)
                      +-.+...++.+++..      +              .....+|.++++.++..++++..  -.+-+.+-++|.. ..|-+
T Consensus       128 gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~--~~wlgH~~fsP~dp~li~f  205 (386)
T PF14583_consen  128 GTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFED--TDWLGHVQFSPTDPTLIMF  205 (386)
T ss_dssp             EEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEE--SS-EEEEEEETTEEEEEEE
T ss_pred             cceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEec--CccccCcccCCCCCCEEEE
Confidence            233222244444321      0              12246899999999998888887  4666778888853 56777


Q ss_pred             EECC-----CCcEEEEecCCCceEEEecC
Q psy5751         150 VDAD-----SKSLECMTIRNRVRRKVYSN  173 (232)
Q Consensus       150 ~d~~-----~~~i~~~~~~g~~~~~~~~~  173 (232)
                      |..+     ..+||.++.+|++.+.+.+.
T Consensus       206 CHEGpw~~Vd~RiW~i~~dg~~~~~v~~~  234 (386)
T PF14583_consen  206 CHEGPWDLVDQRIWTINTDGSNVKKVHRR  234 (386)
T ss_dssp             EE-S-TTTSS-SEEEEETTS---EESS--
T ss_pred             eccCCcceeceEEEEEEcCCCcceeeecC
Confidence            7654     46999999999988777554

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.38  E-value=0.043  Score=42.92  Aligned_cols=154  Identities=18%  Similarity=0.141  Sum_probs=101.2

Q ss_pred             CccEEEEeecCCeEEEEeCCCC--eEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          45 SPEGLTFDWVNRVLYWTDSQMD--TISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        45 ~p~gl~~d~~~~~ly~~d~~~~--~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      --.|+.++. .+.||-+....+  +|.++++++........ ...---.|+++.  ++.||.-.|.  .++..+.+.+.-
T Consensus        46 FTQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk--~~~~f~yd~~tl  120 (264)
T PF05096_consen   46 FTQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWK--EGTGFVYDPNTL  120 (264)
T ss_dssp             EEEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESS--SSEEEEEETTTT
T ss_pred             cCccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEec--CCeEEEEccccc
Confidence            447888854 678998876654  78899998766433332 222245689988  8999999998  567888888754


Q ss_pred             CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ecCCCc----eEEEEEECCEEEEEeCCCC
Q psy5751         122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YSNCTY----PFGLSITDEKYYWTDWKTN  195 (232)
Q Consensus       122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~~~~~----p~gla~~~~~ly~td~~~~  195 (232)
                      ....-+..  ...-.||+-|  +..||.+|. +.+++..++..-+. +.+ +.....    .+-|.+.+|.||---|.+.
T Consensus       121 ~~~~~~~y--~~EGWGLt~d--g~~Li~SDG-S~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td  195 (264)
T PF05096_consen  121 KKIGTFPY--PGEGWGLTSD--GKRLIMSDG-SSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTD  195 (264)
T ss_dssp             EEEEEEE---SSS--EEEEC--SSCEEEE-S-SSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSS
T ss_pred             eEEEEEec--CCcceEEEcC--CCEEEEECC-ccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCC
Confidence            33332332  2456788855  478888875 77899999875432 223 223333    3567778999999999999


Q ss_pred             cEEEEeCCCCCcc
Q psy5751         196 RIESANKEGERAP  208 (232)
Q Consensus       196 ~i~~~~~~g~~~~  208 (232)
                      +|.+++|..+.+.
T Consensus       196 ~I~~Idp~tG~V~  208 (264)
T PF05096_consen  196 RIVRIDPETGKVV  208 (264)
T ss_dssp             EEEEEETTT-BEE
T ss_pred             eEEEEeCCCCeEE
Confidence            9999999855544

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function

Probab=97.36  E-value=0.015  Score=50.48  Aligned_cols=65  Identities=15%  Similarity=0.287  Sum_probs=47.8

Q ss_pred             CCCCCccEEEEeecCCeEEEEeCCCC-------------------eEEEEeCCCCC-------CEEEEe-----------
Q psy5751          41 TNIRSPEGLTFDWVNRVLYWTDSQMD-------------------TISMANLNDDQ-------PKVIVS-----------   83 (232)
Q Consensus        41 ~~~~~p~gl~~d~~~~~ly~~d~~~~-------------------~I~~~~~~g~~-------~~~~~~-----------   83 (232)
                      +.+..|+++++++.++.+|++-+.++                   +|+++..++..       -..++.           
T Consensus       347 T~f~RpEgi~~~p~~g~vY~a~T~~~~r~~~~~~~~n~~~~n~~G~I~r~~~~~~d~~~~~f~~~~~~~~g~~~~~~~~~  426 (524)
T PF05787_consen  347 TPFDRPEGITVNPDDGEVYFALTNNSGRGESDVDAANPRAGNGYGQIYRYDPDGNDHAATTFTWELFLVGGDPTDASGNG  426 (524)
T ss_pred             ccccCccCeeEeCCCCEEEEEEecCCCCcccccccCCcccCCcccEEEEecccCCccccceeEEEEEEEecCcccccccc
Confidence            35789999999999999999975543                   89999877651       122221           


Q ss_pred             ------CCCCCceEEEEeCCCCeEEEEEc
Q psy5751          84 ------KDLVNPRGIVVHPYYRKLFWSDW  106 (232)
Q Consensus        84 ------~~~~~p~~iavd~~~~~ly~~d~  106 (232)
                            ..++.|..|++++ .|.||+..-
T Consensus       427 ~~~~~~~~f~sPDNL~~d~-~G~LwI~eD  454 (524)
T PF05787_consen  427 SNKCDDNGFASPDNLAFDP-DGNLWIQED  454 (524)
T ss_pred             cCcccCCCcCCCCceEECC-CCCEEEEeC
Confidence                  2377999999998 677777643

>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function

Probab=97.29  E-value=0.03  Score=48.64  Aligned_cols=138  Identities=20%  Similarity=0.202  Sum_probs=79.6

Q ss_pred             eCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-CeEEEEeCCCC----------
Q psy5751           8 DCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-DTISMANLNDD----------   76 (232)
Q Consensus         8 d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-~~I~~~~~~g~----------   76 (232)
                      +.....+|.+|......|||+..+......-     .....--++  .+.||++.-.. +.+..+.+.-.          
T Consensus       255 ~~~~~vvY~gDD~~~~~lYkFVs~~~~~~~~-----~~~~~~ll~--~GtLyaak~~~~g~~~Wv~L~~~~~~l~~~~~~  327 (524)
T PF05787_consen  255 DPGRVVVYMGDDGRNGYLYKFVSDKPWDPGD-----RAANRDLLD--EGTLYAAKFNQDGTGEWVPLGHGQGGLTAKNGF  327 (524)
T ss_pred             cCCeEEEEEEecCCCCeEEEEecCCCCCCcc-----cchhhhhhh--CCEeceEEECCCCcEEEEECCCcccccccCCCC
Confidence            6667788999887666899988775432000     000000011  34455443221 22333333211          


Q ss_pred             -C--------C--E-EEEeCCCCCceEEEEeCCCCeEEEEEcCCC-----------------CCcEEEEeCCCC------
Q psy5751          77 -Q--------P--K-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-----------------GPKIEWSNLDGT------  121 (232)
Q Consensus        77 -~--------~--~-~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-----------------~~~I~~~~~~g~------  121 (232)
                       .        +  . .+-...+.+|.+++++|.++.+|++..+..                 .++|+++..++.      
T Consensus       328 ~~~a~v~~~tr~aA~~~GAT~f~RpEgi~~~p~~g~vY~a~T~~~~r~~~~~~~~n~~~~n~~G~I~r~~~~~~d~~~~~  407 (524)
T PF05787_consen  328 ADQADVLIETRRAADAVGATPFDRPEGITVNPDDGEVYFALTNNSGRGESDVDAANPRAGNGYGQIYRYDPDGNDHAATT  407 (524)
T ss_pred             CChHHhhhhhhhccccCccccccCccCeeEeCCCCEEEEEEecCCCCcccccccCCcccCCcccEEEEecccCCccccce
Confidence             0        0  0 011146889999999999999999864322                 358999887765      


Q ss_pred             -CcEEEEEc----------------CCCCCcceEEEeCCCCEEEEEECC
Q psy5751         122 -DREIFLKA----------------ADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus       122 -~~~~~~~~----------------~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                       ..+.++..                ..+..|.+|+||+. ++||+++-.
T Consensus       408 f~~~~~~~~g~~~~~~~~~~~~~~~~~f~sPDNL~~d~~-G~LwI~eD~  455 (524)
T PF05787_consen  408 FTWELFLVGGDPTDASGNGSNKCDDNGFASPDNLAFDPD-GNLWIQEDG  455 (524)
T ss_pred             eEEEEEEEecCcccccccccCcccCCCcCCCCceEECCC-CCEEEEeCC
Confidence             22233321                12678999999996 778777543

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.24  E-value=0.1  Score=44.24  Aligned_cols=145  Identities=14%  Similarity=0.121  Sum_probs=89.5

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEe---CCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCe
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD---SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRK  100 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d---~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~  100 (232)
                      .++..+-+|.....+.... .....-+.-+.+..+....   ..+.+|+..+++......+++. ...-...++.|.+.+
T Consensus       174 ~l~~~D~dg~~~~~l~~~~-~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~-~g~~~~P~fspDG~~  251 (425)
T COG0823         174 ELALGDYDGYNQQKLTDSG-SLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNF-NGNNGAPAFSPDGSK  251 (425)
T ss_pred             eEEEEccCCcceeEecccC-cceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeecc-CCccCCccCCCCCCE
Confidence            6777777765543333221 1111112222233333332   2224699999998888777762 223334567777888


Q ss_pred             EEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEEEEecCCCceEEEec
Q psy5751         101 LFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLECMTIRNRVRRKVYS  172 (232)
Q Consensus       101 ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~~~~~~g~~~~~~~~  172 (232)
                      |.++....+...|+.+++++.....+.+..  ..-..=.+.+++.+|+++....+  .|++++++|+..+.+..
T Consensus       252 l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~--gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~  323 (425)
T COG0823         252 LAFSSSRDGSPDIYLMDLDGKNLPRLTNGF--GINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTF  323 (425)
T ss_pred             EEEEECCCCCccEEEEcCCCCcceecccCC--ccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeec
Confidence            888876656888999999999866644432  22224467788889988866544  79999999987765533

>KOG1446|consensus

Probab=97.17  E-value=0.08  Score=41.86  Aligned_cols=209  Identities=12%  Similarity=0.012  Sum_probs=123.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEE-eecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTF-DWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~-d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      +.+++|+..++.|.. ...++ .|+.++........++...-..+.-+.+ +..+..||=+...+..|...++.......
T Consensus        17 i~sl~fs~~G~~lit-ss~dD-sl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR   94 (311)
T KOG1446|consen   17 INSLDFSDDGLLLIT-SSEDD-SLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR   94 (311)
T ss_pred             eeEEEecCCCCEEEE-ecCCC-eEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence            458899985555554 44455 6888887644433444332234444444 33344555444456788888988877666


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .+..+-...++|.+.|.+ ..|.+...  ...|...++....-+.++.   +..+.-.|+||. |.++-+-.+...|...
T Consensus        95 YF~GH~~~V~sL~~sP~~-d~FlS~S~--D~tvrLWDlR~~~cqg~l~---~~~~pi~AfDp~-GLifA~~~~~~~IkLy  167 (311)
T KOG1446|consen   95 YFPGHKKRVNSLSVSPKD-DTFLSSSL--DKTVRLWDLRVKKCQGLLN---LSGRPIAAFDPE-GLIFALANGSELIKLY  167 (311)
T ss_pred             EcCCCCceEEEEEecCCC-CeEEeccc--CCeEEeeEecCCCCceEEe---cCCCcceeECCC-CcEEEEecCCCeEEEE
Confidence            666677888999999954 77777654  3457778887666666655   446777899996 6666555555578877


Q ss_pred             ecCCC--ce-EEE-ec--CCCceEEEEE--ECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCccee
Q psy5751         161 TIRNR--VR-RKV-YS--NCTYPFGLSI--TDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYM  220 (232)
Q Consensus       161 ~~~g~--~~-~~~-~~--~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p  220 (232)
                      |++.-  .. +++ ..  ....=..|.+  ++..+.++... +.+..++.. |.....+........-|
T Consensus       168 D~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~-s~~~~lDAf~G~~~~tfs~~~~~~~~~  235 (311)
T KOG1446|consen  168 DLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA-SFIYLLDAFDGTVKSTFSGYPNAGNLP  235 (311)
T ss_pred             EecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC-CcEEEEEccCCcEeeeEeeccCCCCcc
Confidence            77632  11 222 22  1222246666  34455555544 445666654 65555555443333334

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.16  E-value=0.027  Score=46.43  Aligned_cols=153  Identities=11%  Similarity=0.121  Sum_probs=79.0

Q ss_pred             CCeEEEEeCC-CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC
Q psy5751          55 NRVLYWTDSQ-MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK  133 (232)
Q Consensus        55 ~~~ly~~d~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~  133 (232)
                      ++.||.++.. ...++.+|++......+.........|..+.+.++.+|+...+   ..+++++++....+.+...+.-.
T Consensus        48 ~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~---~~l~~vdL~T~e~~~vy~~p~~~  124 (386)
T PF14583_consen   48 RKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG---RSLRRVDLDTLEERVVYEVPDDW  124 (386)
T ss_dssp             -EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT---TEEEEEETTT--EEEEEE--TTE
T ss_pred             CEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC---CeEEEEECCcCcEEEEEECCccc
Confidence            3555656644 3579999999988877776443444577788888998876533   36999999998877776654222


Q ss_pred             CcceEE-EeCCCCEEEEE-EC---------------------CCCcEEEEecCCCceEEEecCCCceEEEEE---ECCEE
Q psy5751         134 LPNSLA-VDFRTDELCWV-DA---------------------DSKSLECMTIRNRVRRKVYSNCTYPFGLSI---TDEKY  187 (232)
Q Consensus       134 ~p~~l~-~d~~~~~Ly~~-d~---------------------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~---~~~~l  187 (232)
                      ..+|-. ++.+ +.+++. ..                     ...+|..++++++..+++.+.-.+..-+.+   +.+.|
T Consensus       125 ~g~gt~v~n~d-~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp~li  203 (386)
T PF14583_consen  125 KGYGTWVANSD-CTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDPTLI  203 (386)
T ss_dssp             EEEEEEEE-TT-SSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEEEEE
T ss_pred             ccccceeeCCC-ccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCCCEE
Confidence            233333 3444 333333 11                     145899999999988888764333222222   33445


Q ss_pred             EEEeCC---C--CcEEEEeCCCCCcceEE
Q psy5751         188 YWTDWK---T--NRIESANKEGERAPSIA  211 (232)
Q Consensus       188 y~td~~---~--~~i~~~~~~g~~~~~i~  211 (232)
                      .+|+-+   .  .+|+.++.+|+..+.+.
T Consensus       204 ~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~  232 (386)
T PF14583_consen  204 MFCHEGPWDLVDQRIWTINTDGSNVKKVH  232 (386)
T ss_dssp             EEEE-S-TTTSS-SEEEEETTS---EESS
T ss_pred             EEeccCCcceeceEEEEEEcCCCcceeee
Confidence            554332   2  37777887777766543

>KOG0289|consensus

Probab=97.12  E-value=0.12  Score=42.86  Aligned_cols=190  Identities=9%  Similarity=0.041  Sum_probs=115.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      .++..++.++.|.|++-... -.+.-.-+|+...+.... .--.....++++ .+.||-+...++.+-..|+....-..-
T Consensus       307 ~~ls~h~tgeYllsAs~d~~-w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~  384 (506)
T KOG0289|consen  307 TGLSLHPTGEYLLSASNDGT-WAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAK  384 (506)
T ss_pred             eeeeeccCCcEEEEecCCce-EEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcCCcccccc
Confidence            36777887788888775544 344433445554333322 112467788888 678998988888899999887664444


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC-CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT-DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +..+-.....+++.. +|+-..+...  .+.|...++... +...+.... ....+.+.||..+..|-.. ...=+|+.+
T Consensus       385 Fpght~~vk~i~FsE-NGY~Lat~ad--d~~V~lwDLRKl~n~kt~~l~~-~~~v~s~~fD~SGt~L~~~-g~~l~Vy~~  459 (506)
T KOG0289|consen  385 FPGHTGPVKAISFSE-NGYWLATAAD--DGSVKLWDLRKLKNFKTIQLDE-KKEVNSLSFDQSGTYLGIA-GSDLQVYIC  459 (506)
T ss_pred             CCCCCCceeEEEecc-CceEEEEEec--CCeEEEEEehhhcccceeeccc-cccceeEEEcCCCCeEEee-cceeEEEEE
Confidence            445555667899986 7844444443  444666666543 233333332 4567899999987666544 333356555


Q ss_pred             ecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEE
Q psy5751         161 TIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIES  199 (232)
Q Consensus       161 ~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~  199 (232)
                      .-....-+.+.+   ......++.+-+..-|.......++.+
T Consensus       460 ~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~  501 (506)
T KOG0289|consen  460 KKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILR  501 (506)
T ss_pred             ecccccceeeehhhhcccccceeeecccceEEeeccchhheE
Confidence            443333333322   233456677767777887777776644

>PTZ00421 coronin; Provisional

Probab=97.06  E-value=0.17  Score=43.70  Aligned_cols=198  Identities=7%  Similarity=0.002  Sum_probs=107.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      .+++|++.++.++++-..++ .|...++.....       ...+...-..+..+++.+..+.+.++-...+.|...|+..
T Consensus        79 ~~v~fsP~d~~~LaSgS~Dg-tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t  157 (493)
T PTZ00421         79 IDVAFNPFDPQKLFTASEDG-TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER  157 (493)
T ss_pred             EEEEEcCCCCCEEEEEeCCC-EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC
Confidence            47888884444444444455 677777753211       1122223356778888876656666767778899999886


Q ss_pred             CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE---C
Q psy5751          76 DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD---A  152 (232)
Q Consensus        76 ~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d---~  152 (232)
                      ......+........+++..+ ++.++.+-..  .++|...++........+....-.....+.+.+..+.|..+-   .
T Consensus       158 g~~~~~l~~h~~~V~sla~sp-dG~lLatgs~--Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s  234 (493)
T PTZ00421        158 GKAVEVIKCHSDQITSLEWNL-DGSLLCTTSK--DKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKS  234 (493)
T ss_pred             CeEEEEEcCCCCceEEEEEEC-CCCEEEEecC--CCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCC
Confidence            654444444455678899998 4555555433  456877887654332222211011223455555555554432   2


Q ss_pred             CCCcEEEEecCCCceE-EEec-CCCceEEE-EEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751         153 DSKSLECMTIRNRVRR-KVYS-NCTYPFGL-SIT--DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       153 ~~~~i~~~~~~g~~~~-~~~~-~~~~p~gl-a~~--~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ..+.|...+++..... .... .......+ .++  .+.||.+-.+.+.|..++...
T Consensus       235 ~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~  291 (493)
T PTZ00421        235 QQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN  291 (493)
T ss_pred             CCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC
Confidence            2456777777643221 1111 11111222 232  345666554567777777763

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.05  E-value=0.065  Score=44.95  Aligned_cols=134  Identities=13%  Similarity=0.069  Sum_probs=90.8

Q ss_pred             EEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEE
Q psy5751          14 VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIV   93 (232)
Q Consensus        14 ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia   93 (232)
                      +....-... .|..++.+|... +.+..++..+..+.++..++.+-+++ ....|++++++....+.+-.+.-.-..+++
T Consensus       374 ~vigt~dgD-~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaN-dr~el~vididngnv~~idkS~~~lItdf~  450 (668)
T COG4946         374 DVIGTNDGD-KLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVAN-DRFELWVIDIDNGNVRLIDKSEYGLITDFD  450 (668)
T ss_pred             eEEeccCCc-eEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEc-CceEEEEEEecCCCeeEecccccceeEEEE
Confidence            333333333 677777777665 44556788999999999777776665 447899999999888777665666678888


Q ss_pred             EeCCCCeEEEEEcC-CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          94 VHPYYRKLFWSDWN-RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        94 vd~~~~~ly~~d~~-~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      ++|..+++-++--. -=...|...+|+|..+--+...  -..--.-|+|+++..||+-..
T Consensus       451 ~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~--ta~DfsPaFD~d~ryLYfLs~  508 (668)
T COG4946         451 WHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTP--TAYDFSPAFDPDGRYLYFLSA  508 (668)
T ss_pred             EcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCC--cccccCcccCCCCcEEEEEec
Confidence            99866655554311 0023478888998765444332  334445689999999999843

>KOG0315|consensus

Probab=96.99  E-value=0.11  Score=40.12  Aligned_cols=176  Identities=17%  Similarity=0.119  Sum_probs=110.0

Q ss_pred             cEEEEEcCCCceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeE
Q psy5751          24 SIKRAHLDGKNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKL  101 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~l  101 (232)
                      .|+.++++..+...+.  ....+....+.+...++..| +..+.+.+...|+....+...+. ..+-.+.+.++|....|
T Consensus        62 hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMy-TgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteL  139 (311)
T KOG0315|consen   62 HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMY-TGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTEL  139 (311)
T ss_pred             eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEE-ecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceE
Confidence            5777788765543332  23346778888888778777 77788889999988866655555 33556899999999999


Q ss_pred             EEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC-ceEEE--ecCCC--c
Q psy5751         102 FWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR-VRRKV--YSNCT--Y  176 (232)
Q Consensus       102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~-~~~~~--~~~~~--~  176 (232)
                      +..|..   +.|+..++......-.+..++...-..+++++++.+| .+-...++.++.++-+. ....+  ...++  .
T Consensus       140 is~dqs---g~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml-~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~  215 (311)
T KOG0315|consen  140 ISGDQS---GNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSML-AAANNKGNCYVWRLLNHQTASELEPVHKFQAHN  215 (311)
T ss_pred             EeecCC---CcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEE-EEecCCccEEEEEccCCCccccceEhhheeccc
Confidence            999954   5588877765432222222225667899999985555 45445555555555432 11111  11221  1


Q ss_pred             eEEEE--EE-CCEEEEEeCCCCcEEEEeCCCC
Q psy5751         177 PFGLS--IT-DEKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       177 p~gla--~~-~~~ly~td~~~~~i~~~~~~g~  205 (232)
                      -.++.  +- +++...|-+....+...+.++-
T Consensus       216 ~~il~C~lSPd~k~lat~ssdktv~iwn~~~~  247 (311)
T KOG0315|consen  216 GHILRCLLSPDVKYLATCSSDKTVKIWNTDDF  247 (311)
T ss_pred             ceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence            22333  32 5566666666777888887766

>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides

Probab=96.86  E-value=0.004  Score=40.01  Aligned_cols=39  Identities=10%  Similarity=0.164  Sum_probs=31.6

Q ss_pred             CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751         122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus       122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      ....+...  +..||||+++++++.||+++...+.|..+..
T Consensus        45 ~~~~va~g--~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~   83 (86)
T PF01731_consen   45 EVKVVASG--FSFANGIAISPDKKYLYVASSLAHSIHVYKR   83 (86)
T ss_pred             EeEEeecc--CCCCceEEEcCCCCEEEEEeccCCeEEEEEe
Confidence            34444554  8899999999999999999999888877654

The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity

>KOG0285|consensus

Probab=96.80  E-value=0.13  Score=41.59  Aligned_cols=119  Identities=18%  Similarity=0.156  Sum_probs=84.0

Q ss_pred             CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751          41 TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG  120 (232)
Q Consensus        41 ~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g  120 (232)
                      ..+.+...+++|+ .+..|.+....+.|-..|+.....+..+.......+++++++.--+||-+.-   ..+|...+++.
T Consensus       149 gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge---dk~VKCwDLe~  224 (460)
T KOG0285|consen  149 GHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE---DKQVKCWDLEY  224 (460)
T ss_pred             hccceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC---CCeeEEEechh
Confidence            4567899999999 4667778888888999999988877777667788899999976566665543   45688888875


Q ss_pred             CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751         121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR  165 (232)
Q Consensus       121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~  165 (232)
                      ....--... .+....+|++.|.-+.| ++-.....+...|++..
T Consensus       225 nkvIR~YhG-HlS~V~~L~lhPTldvl-~t~grDst~RvWDiRtr  267 (460)
T KOG0285|consen  225 NKVIRHYHG-HLSGVYCLDLHPTLDVL-VTGGRDSTIRVWDIRTR  267 (460)
T ss_pred             hhhHHHhcc-ccceeEEEeccccceeE-EecCCcceEEEeeeccc
Confidence            543222222 27778899999974444 55455555555556543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=96.80  E-value=0.41  Score=44.04  Aligned_cols=195  Identities=8%  Similarity=-0.038  Sum_probs=110.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-----ce--eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGK-----NV--EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-----~~--~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      .+++|++.++.|..+ ..++ .|...+++..     ..  .......-....+++..+..+....+-...+.|...|+..
T Consensus       487 ~~i~fs~dg~~latg-g~D~-~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~  564 (793)
T PLN00181        487 CAIGFDRDGEFFATA-GVNK-KIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVAR  564 (793)
T ss_pred             EEEEECCCCCEEEEE-eCCC-EEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCC
Confidence            478899855544443 3444 6777776421     10  0111111234566666654344445555678899999876


Q ss_pred             CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          76 DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        76 ~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      ......+..+.....+++++|.++.++++-..  .+.|...++........+..  ......+.+.+.++.++.+-...+
T Consensus       565 ~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~--Dg~v~iWd~~~~~~~~~~~~--~~~v~~v~~~~~~g~~latgs~dg  640 (793)
T PLN00181        565 SQLVTEMKEHEKRVWSIDYSSADPTLLASGSD--DGSVKLWSINQGVSIGTIKT--KANICCVQFPSESGRSLAFGSADH  640 (793)
T ss_pred             CeEEEEecCCCCCEEEEEEcCCCCCEEEEEcC--CCEEEEEECCCCcEEEEEec--CCCeEEEEEeCCCCCEEEEEeCCC
Confidence            55444444455567899998766666666543  45677777764433222222  234566777665566666667788


Q ss_pred             cEEEEecCCCce--EEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         156 SLECMTIRNRVR--RKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       156 ~i~~~~~~g~~~--~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      .|...+++....  ..+.........+++..+..++|-...+.|...+..
T Consensus       641 ~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~  690 (793)
T PLN00181        641 KVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLS  690 (793)
T ss_pred             eEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCC
Confidence            888888875432  222222233345666544445555555666666543

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=96.80  E-value=0.21  Score=40.74  Aligned_cols=160  Identities=15%  Similarity=0.130  Sum_probs=93.9

Q ss_pred             EEEEEeCCCCEEEEE-EcCC---CCcEEEEEcCCC-----cee-----EEEeCC---C----CCccEEEEeecCCeEEEE
Q psy5751           3 IGITVDCVEGQVYYS-SVAD---KSSIKRAHLDGK-----NVE-----DVITTN---I----RSPEGLTFDWVNRVLYWT   61 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~-d~~~---~~~i~~~~~~g~-----~~~-----~~~~~~---~----~~p~gl~~d~~~~~ly~~   61 (232)
                      .||++++..+.+|.. |-..   .++++.+.++..     ...     .+....   +    ..++||++ ..++.+||+
T Consensus        23 Sgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~-~~~g~~~is  101 (326)
T PF13449_consen   23 SGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAV-PPDGSFWIS  101 (326)
T ss_pred             eeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEE-ecCCCEEEE
Confidence            378999756655444 3333   124777666541     110     111110   1    27789999 458899999


Q ss_pred             eCCC------CeEEEEeCCCCCCEEE-EeC-------------CCCCceEEEEeCCCCeEEEEEcCC---C---C-----
Q psy5751          62 DSQM------DTISMANLNDDQPKVI-VSK-------------DLVNPRGIVVHPYYRKLFWSDWNR---S---G-----  110 (232)
Q Consensus        62 d~~~------~~I~~~~~~g~~~~~~-~~~-------------~~~~p~~iavd~~~~~ly~~d~~~---~---~-----  110 (232)
                      +...      .+|++++.+|...+.+ +..             ......+||+.+.++.||.+....   +   .     
T Consensus       102 ~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~  181 (326)
T PF13449_consen  102 SEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNG  181 (326)
T ss_pred             eCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccccccC
Confidence            9999      9999999998875544 221             223446999999666688764321   1   1     


Q ss_pred             --CcEEEEeCCCCC---cEEEEEcC------CCCCcceEEEeCCCCEEEEEECC-------CCcEEEEecCC
Q psy5751         111 --PKIEWSNLDGTD---REIFLKAA------DLKLPNSLAVDFRTDELCWVDAD-------SKSLECMTIRN  164 (232)
Q Consensus       111 --~~I~~~~~~g~~---~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~-------~~~i~~~~~~g  164 (232)
                        .+|.+.+.....   .+-.....      ....++.++.-++ ++|++.+..       ..+|+++++..
T Consensus       182 ~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d-~~lLvLER~~~~~~~~~~ri~~v~l~~  252 (326)
T PF13449_consen  182 SPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPD-GRLLVLERDFSPGTGNYKRIYRVDLSD  252 (326)
T ss_pred             ceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECC-CcEEEEEccCCCCccceEEEEEEEccc
Confidence              356666654311   12111111      1345666766665 668888765       34788888763

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=96.76  E-value=0.23  Score=40.57  Aligned_cols=117  Identities=21%  Similarity=0.197  Sum_probs=77.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCC------CCcEEEEEcCCCceeEE-Ee-------------CCCCCccEEEEeecCCeEEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVAD------KSSIKRAHLDGKNVEDV-IT-------------TNIRSPEGLTFDWVNRVLYWT   61 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~------~~~i~~~~~~g~~~~~~-~~-------------~~~~~p~gl~~d~~~~~ly~~   61 (232)
                      ++||++ ..++.+||++-..      . +|++++.+|...+.+ +.             ......++|++.+.++.||.+
T Consensus        87 ~Egi~~-~~~g~~~is~E~~~~~~~~p-~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~  164 (326)
T PF13449_consen   87 PEGIAV-PPDGSFWISSEGGRTGGIPP-RIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA  164 (326)
T ss_pred             hhHeEE-ecCCCEEEEeCCccCCCCCC-EEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence            468889 5699999999988      7 999999998764444 11             123577999999988878887


Q ss_pred             eCCC---------------CeEEEEeCCC--CCCEE-EEe-C------CCCCceEEEEeCCCCeEEEEEcC-----CCCC
Q psy5751          62 DSQM---------------DTISMANLND--DQPKV-IVS-K------DLVNPRGIVVHPYYRKLFWSDWN-----RSGP  111 (232)
Q Consensus        62 d~~~---------------~~I~~~~~~g--~~~~~-~~~-~------~~~~p~~iavd~~~~~ly~~d~~-----~~~~  111 (232)
                      -...               -+|+..+...  ..... ... .      ....+.+++..+ ++.|++.+-.     ....
T Consensus       165 ~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~-d~~lLvLER~~~~~~~~~~  243 (326)
T PF13449_consen  165 MESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALP-DGRLLVLERDFSPGTGNYK  243 (326)
T ss_pred             ECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEEC-CCcEEEEEccCCCCccceE
Confidence            5442               3577777653  22222 222 2      345667777775 6778887643     1245


Q ss_pred             cEEEEeCCCC
Q psy5751         112 KIEWSNLDGT  121 (232)
Q Consensus       112 ~I~~~~~~g~  121 (232)
                      +|+++++...
T Consensus       244 ri~~v~l~~a  253 (326)
T PF13449_consen  244 RIYRVDLSDA  253 (326)
T ss_pred             EEEEEEcccc
Confidence            7777776543

>KOG0285|consensus

Probab=96.66  E-value=0.27  Score=39.96  Aligned_cols=99  Identities=16%  Similarity=0.173  Sum_probs=71.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++++|+. +..|.+...+. .|...++........+...+...+++++....-.|| +-...+.|-..|+.....-.-.
T Consensus       155 r~vavdP~-n~wf~tgs~Dr-tikIwDlatg~LkltltGhi~~vr~vavS~rHpYlF-s~gedk~VKCwDLe~nkvIR~Y  231 (460)
T KOG0285|consen  155 RSVAVDPG-NEWFATGSADR-TIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLF-SAGEDKQVKCWDLEYNKVIRHY  231 (460)
T ss_pred             EEEeeCCC-ceeEEecCCCc-eeEEEEcccCeEEEeecchhheeeeeeecccCceEE-EecCCCeeEEEechhhhhHHHh
Confidence            57899995 66677777777 899999998777566665678999999998766676 4444567777888765532222


Q ss_pred             eCCCCCceEEEEeCCCCeEEEE
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWS  104 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~  104 (232)
                      ...+.....++++|.-+.|+-.
T Consensus       232 hGHlS~V~~L~lhPTldvl~t~  253 (460)
T KOG0285|consen  232 HGHLSGVYCLDLHPTLDVLVTG  253 (460)
T ss_pred             ccccceeEEEeccccceeEEec
Confidence            2578888889999855555443

>KOG4378|consensus

Probab=96.58  E-value=0.25  Score=41.77  Aligned_cols=189  Identities=11%  Similarity=0.090  Sum_probs=105.5

Q ss_pred             CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEE-eCCCCeEEEEeCCCCCCEEEEe-CCCCCc
Q psy5751          12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWT-DSQMDTISMANLNDDQPKVIVS-KDLVNP   89 (232)
Q Consensus        12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~-d~~~~~I~~~~~~g~~~~~~~~-~~~~~p   89 (232)
                      ..+|....+.+..+..+++...-..+.+...-..+.++.+.|..  =|++ -...+.|............-+. .+....
T Consensus        90 ~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~D--eyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsv  167 (673)
T KOG4378|consen   90 QSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTD--EYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSV  167 (673)
T ss_pred             cceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCc--ceeEEeccCCcEEEEecccCccccceecCCCCeE
Confidence            34555544444234444444221111122222455566666532  2333 2334566666665555444443 223333


Q ss_pred             eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEE
Q psy5751          90 RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRK  169 (232)
Q Consensus        90 ~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~  169 (232)
                      +-+-+++..+.|..+...  .+.+...+..|.....-....+-....||+|.+.+..|+++-....+|..+|........
T Consensus       168 Rll~ys~skr~lL~~asd--~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~  245 (673)
T KOG4378|consen  168 RLLRYSPSKRFLLSIASD--KGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD  245 (673)
T ss_pred             EEeecccccceeeEeecc--CCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence            456677777888777655  455777777766543333332233457999999999999998888899998877432211


Q ss_pred             EecCCCceE-EEEE-ECCEEEEEeCCCCcEEEEeCCCC
Q psy5751         170 VYSNCTYPF-GLSI-TDEKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       170 ~~~~~~~p~-gla~-~~~~ly~td~~~~~i~~~~~~g~  205 (232)
                      -+ .-.+|. .+|+ +.|....+-..+++|+-.+..+.
T Consensus       246 ~l-~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~  282 (673)
T KOG4378|consen  246 RL-TYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRST  282 (673)
T ss_pred             ee-eecCCcceeeecCCceEEEeecCCceEEEEecccC
Confidence            11 123454 5666 35666666666788887777643

>KOG0272|consensus

Probab=96.56  E-value=0.26  Score=40.67  Aligned_cols=136  Identities=8%  Similarity=-0.015  Sum_probs=86.4

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD  122 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~  122 (232)
                      -....++++.+ .+.|..+......=.+.|+....+..++..+.....+++.+| +|+..-|-..-...+|+...+....
T Consensus       303 s~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~kVWDLR~r~~l  380 (459)
T KOG0272|consen  303 SKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSP-NGYHLATGSSDNTCKVWDLRMRSEL  380 (459)
T ss_pred             ccccceeEecC-CCceeeccCccchhheeecccCcEEEEecccccceeeEeECC-CceEEeecCCCCcEEEeeecccccc
Confidence            46788999998 566766655544344558887777788888888899999998 8987777654334455554444331


Q ss_pred             cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc-eEEEecCCCceEEEEEE
Q psy5751         123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV-RRKVYSNCTYPFGLSIT  183 (232)
Q Consensus       123 ~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~-~~~~~~~~~~p~gla~~  183 (232)
                      -.+...   -.-.+.+.+++..|...++-+..+.+.....++.. .+.++..-....++++.
T Consensus       381 y~ipAH---~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis  439 (459)
T KOG0272|consen  381 YTIPAH---SNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDIS  439 (459)
T ss_pred             eecccc---cchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEec
Confidence            111111   34567889998778877887777766655555433 23344444445566553

>KOG4378|consensus

Probab=96.54  E-value=0.41  Score=40.60  Aligned_cols=159  Identities=14%  Similarity=0.069  Sum_probs=99.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      ..++.|++.+..|--...+.  .|....+......+.+..+ -....=|.+.+-.+.|..+-...+.+...|..|..+..
T Consensus       124 vt~v~YN~~DeyiAsvs~gG--diiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~  201 (673)
T KOG4378|consen  124 VTYVDYNNTDEYIASVSDGG--DIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIF  201 (673)
T ss_pred             eEEEEecCCcceeEEeccCC--cEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCccc
Confidence            35677777555543333332  4665555544433333222 22334466677778888777778899999999987665


Q ss_pred             EEeC-CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          81 IVSK-DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        81 ~~~~-~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      -+.+ +-+-..||++.|.+..|+++-.-  .-+|..++.........+..  -..-..++|.+. |....+-...++|..
T Consensus       202 ~~~~~HsAP~~gicfspsne~l~vsVG~--Dkki~~yD~~s~~s~~~l~y--~~Plstvaf~~~-G~~L~aG~s~G~~i~  276 (673)
T KOG4378|consen  202 HASEAHSAPCRGICFSPSNEALLVSVGY--DKKINIYDIRSQASTDRLTY--SHPLSTVAFSEC-GTYLCAGNSKGELIA  276 (673)
T ss_pred             chhhhccCCcCcceecCCccceEEEecc--cceEEEeecccccccceeee--cCCcceeeecCC-ceEEEeecCCceEEE
Confidence            5543 33344799999988888887643  35688777664433222221  123467888886 555556566789999


Q ss_pred             EecCCCce
Q psy5751         160 MTIRNRVR  167 (232)
Q Consensus       160 ~~~~g~~~  167 (232)
                      .|+++.+.
T Consensus       277 YD~R~~k~  284 (673)
T KOG4378|consen  277 YDMRSTKA  284 (673)
T ss_pred             EecccCCC
Confidence            99998754

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.49  E-value=0.31  Score=38.67  Aligned_cols=184  Identities=10%  Similarity=0.132  Sum_probs=110.0

Q ss_pred             eCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC---CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-
Q psy5751           8 DCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT---NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-   83 (232)
Q Consensus         8 d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~---~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-   83 (232)
                      .-..+..|++|+.+.  +..+++.......+...   .-...+.+++.  ++.-|+++... -+..+|......-+++. 
T Consensus       135 ~vsGn~aYVadlddg--fLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~-GL~ivDVSnp~sPvli~~  209 (370)
T COG5276         135 YVSGNYAYVADLDDG--FLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDG-GLTIVDVSNPHSPVLIGS  209 (370)
T ss_pred             EecCCEEEEeeccCc--EEEEECCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCC-CeEEEEccCCCCCeEEEE
Confidence            335789999998766  66677765543333221   11223567777  68889888764 46677776655444444 


Q ss_pred             CCCC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceE-EEeCCCCEEEEEECCCCcEEEEe
Q psy5751          84 KDLV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSL-AVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        84 ~~~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l-~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      -+.. ...+..+.  .++.|.++.+..   +...+.++.....++..-+-..|.++ .+--.+++.|++|...+ +-.++
T Consensus       210 ~n~g~g~~sv~vs--dnr~y~vvy~eg---vlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~g-l~~id  283 (370)
T COG5276         210 YNTGPGTYSVSVS--DNRAYLVVYDEG---VLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKG-LPIID  283 (370)
T ss_pred             EecCCceEEEEec--CCeeEEEEcccc---eEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccC-ceeEe
Confidence            2222 44555555  788999987743   56666666654444443225566655 22223589999987544 33333


Q ss_pred             cCCCceEEEecCCC----ceEEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751         162 IRNRVRRKVYSNCT----YPFGLSITDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       162 ~~g~~~~~~~~~~~----~p~gla~~~~~ly~td~~~~~i~~~~~  202 (232)
                      .+......+.+.+.    ...|+.+.++.+|+++...+.+.-+.+
T Consensus       284 isnp~spfl~ss~~t~g~~a~gi~ay~~y~yiadkn~g~vV~~s~  328 (370)
T COG5276         284 ISNPPSPFLSSSLDTAGYQAAGIRAYGNYNYIADKNTGAVVDASP  328 (370)
T ss_pred             ccCCCCCchhccccCCCccccceEEecCeeEeccCCceEEEeCCC
Confidence            43322223333222    356899999999999988776654443

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=96.40  E-value=0.3  Score=37.45  Aligned_cols=179  Identities=12%  Similarity=0.084  Sum_probs=100.6

Q ss_pred             CCEEEEEEcCCCCcEEEEEc-CCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeC-CCCCCEEEEe-C--
Q psy5751          11 EGQVYYSSVADKSSIKRAHL-DGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANL-NDDQPKVIVS-K--   84 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~-~--   84 (232)
                      ++.+|+++ ..+ .|+.++. +|....+.-.. .+..+  ..++  ++.+|+.... ++|+.++. +|...-.... .  
T Consensus        36 ~~~v~~~~-~~~-~l~~~d~~tG~~~W~~~~~~~~~~~--~~~~--~~~v~v~~~~-~~l~~~d~~tG~~~W~~~~~~~~  108 (238)
T PF13360_consen   36 GGRVYVAS-GDG-NLYALDAKTGKVLWRFDLPGPISGA--PVVD--GGRVYVGTSD-GSLYALDAKTGKVLWSIYLTSSP  108 (238)
T ss_dssp             TTEEEEEE-TTS-EEEEEETTTSEEEEEEECSSCGGSG--EEEE--TTEEEEEETT-SEEEEEETTTSCEEEEEEE-SSC
T ss_pred             CCEEEEEc-CCC-EEEEEECCCCCEEEEeeccccccce--eeec--ccccccccce-eeeEecccCCcceeeeecccccc
Confidence            67788775 334 6888887 45433333222 11222  2444  6788888744 48889984 4444333222 1  


Q ss_pred             C--CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC--C--------cceEEEeCCCCEEEEEEC
Q psy5751          85 D--LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK--L--------PNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        85 ~--~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~--~--------p~~l~~d~~~~~Ly~~d~  152 (232)
                      .  ...+...+++  ++.+|+...   .+.|..+++......--.....-.  .        ...+.++  ++.+|++..
T Consensus       109 ~~~~~~~~~~~~~--~~~~~~~~~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~  181 (238)
T PF13360_consen  109 PAGVRSSSSPAVD--GDRLYVGTS---SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS--DGRVYVSSG  181 (238)
T ss_dssp             TCSTB--SEEEEE--TTEEEEEET---CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC--TTEEEEECC
T ss_pred             ccccccccCceEe--cCEEEEEec---cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE--CCEEEEEcC
Confidence            1  2234456666  778888874   356888886644332222111001  0        1122223  468988865


Q ss_pred             CCCcEEEEecCCCceEEEecCCCceEE-EEEECCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         153 DSKSLECMTIRNRVRRKVYSNCTYPFG-LSITDEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       153 ~~~~i~~~~~~g~~~~~~~~~~~~p~g-la~~~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      .. .+..++...+++. .......+.+ ....++.||++. ..+.|..+++.++.
T Consensus       182 ~g-~~~~~d~~tg~~~-w~~~~~~~~~~~~~~~~~l~~~~-~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  182 DG-RVVAVDLATGEKL-WSKPISGIYSLPSVDGGTLYVTS-SDGRLYALDLKTGK  233 (238)
T ss_dssp             TS-SEEEEETTTTEEE-EEECSS-ECECEECCCTEEEEEE-TTTEEEEEETTTTE
T ss_pred             CC-eEEEEECCCCCEE-EEecCCCccCCceeeCCEEEEEe-CCCEEEEEECCCCC
Confidence            44 4667788877644 4333555566 455799999999 67899999987443

...

>KOG0310|consensus

Probab=96.29  E-value=0.56  Score=39.45  Aligned_cols=217  Identities=9%  Similarity=0.039  Sum_probs=123.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|-. +++|+.+-...+ .|..+++.....-..+...-....-+-+.+..+.++.+-.....+...++++.....-+
T Consensus        72 ~s~~fR~-DG~LlaaGD~sG-~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l  149 (487)
T KOG0310|consen   72 YSVDFRS-DGRLLAAGDESG-HVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAEL  149 (487)
T ss_pred             eEEEeec-CCeEEEccCCcC-cEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEe
Confidence            4667765 788877766656 78888855421101111111233445566667777776666666667788887754344


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      ..+-...+..++.|.++.|+++...  .++|...+.......+.-.+  ...|---.+--.+|-++.+ .+.+.|...|+
T Consensus       150 ~~htDYVR~g~~~~~~~hivvtGsY--Dg~vrl~DtR~~~~~v~eln--hg~pVe~vl~lpsgs~ias-AgGn~vkVWDl  224 (487)
T KOG0310|consen  150 SGHTDYVRCGDISPANDHIVVTGSY--DGKVRLWDTRSLTSRVVELN--HGCPVESVLALPSGSLIAS-AGGNSVKVWDL  224 (487)
T ss_pred             cCCcceeEeeccccCCCeEEEecCC--CceEEEEEeccCCceeEEec--CCCceeeEEEcCCCCEEEE-cCCCeEEEEEe
Confidence            4566778889999999999999865  56677776665532322222  3344333333333555544 44566777778


Q ss_pred             CCCceEEEecC---CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         163 RNRVRRKVYSN---CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       163 ~g~~~~~~~~~---~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      -++.+ .+...   ......|.+. ++.-..+-.-.+.|..++.  +..+++. ...-++-...+++.++.|
T Consensus       225 ~~G~q-ll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~--t~~Kvv~-s~~~~~pvLsiavs~dd~  292 (487)
T KOG0310|consen  225 TTGGQ-LLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDT--TNYKVVH-SWKYPGPVLSIAVSPDDQ  292 (487)
T ss_pred             cCCce-ehhhhhcccceEEEEEeecCCceEeecccccceEEEEc--cceEEEE-eeecccceeeEEecCCCc
Confidence            74433 23333   3334566664 3344444444566777773  3333221 122244567788888776

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=96.27  E-value=0.033  Score=30.18  Aligned_cols=41  Identities=15%  Similarity=0.260  Sum_probs=30.0

Q ss_pred             CCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEE
Q psy5751         142 FRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI  182 (232)
Q Consensus       142 ~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~  182 (232)
                      +++++||+++...+.|..++........-......|.++++
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence            35688999999999999998865544333445677888775

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>KOG1446|consensus

Probab=96.24  E-value=0.44  Score=37.81  Aligned_cols=174  Identities=13%  Similarity=0.072  Sum_probs=104.6

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW  103 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~  103 (232)
                      .|+-+.+.....-..+...-..+.+|.+.+.+ ..|.+....+.|...|+....+..++.  +..+.-.|+|| .|.+|.
T Consensus        81 tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~cqg~l~--~~~~pi~AfDp-~GLifA  156 (311)
T KOG1446|consen   81 TIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKCQGLLN--LSGRPIAAFDP-EGLIFA  156 (311)
T ss_pred             ceEEEEeecCceEEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCCceEEe--cCCCcceeECC-CCcEEE
Confidence            44444444433323333334577889999865 678888888899999999777777774  34455688998 898888


Q ss_pred             EEcCCCCCcEEEEeCC---CCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec---CCCc
Q psy5751         104 SDWNRSGPKIEWSNLD---GTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS---NCTY  176 (232)
Q Consensus       104 ~d~~~~~~~I~~~~~~---g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---~~~~  176 (232)
                      +..+.+  .|...++.   ....+..... .....=+.|.++++++.|.++.........-.++|.....+..   ....
T Consensus       157 ~~~~~~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~  234 (311)
T KOG1446|consen  157 LANGSE--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNL  234 (311)
T ss_pred             EecCCC--eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCc
Confidence            877643  56665543   3333333222 2244557999999988887776544333333456765444422   2334


Q ss_pred             eEEEEE-ECCEEEEEeCCCCcEEEEeCC
Q psy5751         177 PFGLSI-TDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       177 p~gla~-~~~~ly~td~~~~~i~~~~~~  203 (232)
                      |-+.++ -++....+-...++|..-+..
T Consensus       235 ~~~a~ftPds~Fvl~gs~dg~i~vw~~~  262 (311)
T KOG1446|consen  235 PLSATFTPDSKFVLSGSDDGTIHVWNLE  262 (311)
T ss_pred             ceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence            444444 244444554555666666654

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=96.19  E-value=0.6  Score=38.79  Aligned_cols=122  Identities=17%  Similarity=0.189  Sum_probs=73.3

Q ss_pred             CCCCCccEEEEee--cCCeEEEE-eCCCCeEEEEeC--CCCC--CEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCC
Q psy5751          41 TNIRSPEGLTFDW--VNRVLYWT-DSQMDTISMANL--NDDQ--PKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGP  111 (232)
Q Consensus        41 ~~~~~p~gl~~d~--~~~~ly~~-d~~~~~I~~~~~--~g~~--~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~  111 (232)
                      ..+..|.|+++..  ..+.+|.. ....+.+..+.+  ++..  ...++.  .-...+.|+++|...+.||+.+-.   .
T Consensus       153 ~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYvgEE~---~  229 (381)
T PF02333_consen  153 TDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYVGEED---V  229 (381)
T ss_dssp             -SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEEEETT---T
T ss_pred             cccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEEecCc---c
Confidence            4567899999964  34555543 334466665544  3332  122222  234589999999999999999954   3


Q ss_pred             cEEEEeCCCC--CcEEEE-EcC---CCCCcceEEEeC---CCCEEEEEECCCCcEEEEecCCC
Q psy5751         112 KIEWSNLDGT--DREIFL-KAA---DLKLPNSLAVDF---RTDELCWVDADSKSLECMTIRNR  165 (232)
Q Consensus       112 ~I~~~~~~g~--~~~~~~-~~~---~~~~p~~l~~d~---~~~~Ly~~d~~~~~i~~~~~~g~  165 (232)
                      -||++..+..  ....++ ...   ...-..||++-.   ..++|.+++.+.+....++..+.
T Consensus       230 GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~  292 (381)
T PF02333_consen  230 GIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP  292 (381)
T ss_dssp             EEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred             EEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            4999988733  222333 211   123567999954   24689999988888888877764

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=96.12  E-value=1.1  Score=41.27  Aligned_cols=194  Identities=9%  Similarity=0.025  Sum_probs=105.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      +++|++..+....+-..++ .|...++........+........++++.+..+.++++-...+.|...++........+.
T Consensus       537 ~l~~~~~~~~~las~~~Dg-~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~  615 (793)
T PLN00181        537 GICWNSYIKSQVASSNFEG-VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK  615 (793)
T ss_pred             eEEeccCCCCEEEEEeCCC-eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence            4566554344444444455 788888875443333333345678888886566677787778899999987654433333


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                       .......+.+.+..+.++.+...  .+.|...++.............-.....+.+. ++.. +++-+..+.|...+++
T Consensus       616 -~~~~v~~v~~~~~~g~~latgs~--dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~-lvs~s~D~~ikiWd~~  690 (793)
T PLN00181        616 -TKANICCVQFPSESGRSLAFGSA--DHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSST-LVSSSTDNTLKLWDLS  690 (793)
T ss_pred             -cCCCeEEEEEeCCCCCEEEEEeC--CCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCE-EEEEECCCEEEEEeCC
Confidence             22345566665545666555433  45688887764432111111112344567775 3344 4454556667666665


Q ss_pred             CC-------ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         164 NR-------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       164 g~-------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..       ....+.........+++. .+.+..+-...+.|...+..
T Consensus       691 ~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~  738 (793)
T PLN00181        691 MSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKA  738 (793)
T ss_pred             CCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence            21       112222222223445553 34455555556667766654

>PTZ00421 coronin; Provisional

Probab=96.06  E-value=0.87  Score=39.50  Aligned_cols=196  Identities=12%  Similarity=0.019  Sum_probs=106.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      ..++|++..+.++++-..++ .|...++........+........++++.+.+ .+.++-...+.|...|+........+
T Consensus       129 ~~l~f~P~~~~iLaSgs~Dg-tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG-~lLatgs~Dg~IrIwD~rsg~~v~tl  206 (493)
T PTZ00421        129 GIVSFHPSAMNVLASAGADM-VVNVWDVERGKAVEVIKCHSDQITSLEWNLDG-SLLCTTSKDKKLNIIDPRDGTIVSSV  206 (493)
T ss_pred             EEEEeCcCCCCEEEEEeCCC-EEEEEECCCCeEEEEEcCCCCceEEEEEECCC-CEEEEecCCCEEEEEECCCCcEEEEE
Confidence            36788886555555555556 78888888554333333333567888888844 45567777789999998754432222


Q ss_pred             eCCC-CCceEEEEeCCCCeEEEEEcC-CCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          83 SKDL-VNPRGIVVHPYYRKLFWSDWN-RSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        83 ~~~~-~~p~~iavd~~~~~ly~~d~~-~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      .... .........+..+.++.+... ...+.|...++.......-... .......-..+|+++..||.+-.+.+.|..
T Consensus       207 ~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iri  286 (493)
T PTZ00421        207 EAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRC  286 (493)
T ss_pred             ecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEE
Confidence            2121 122344455545555544322 1245677777654332211111 101122233568887788877666788888


Q ss_pred             EecCCCceEEEec-CCCce-EEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751         160 MTIRNRVRRKVYS-NCTYP-FGLSITDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       160 ~~~~g~~~~~~~~-~~~~p-~gla~~~~~ly~td~~~~~i~~~~~  202 (232)
                      .++.........+ ....| .|+++.-.+  -.|.....|.|+-+
T Consensus       287 wdl~~~~~~~~~~~~s~~~~~g~~~~pk~--~~dv~~~Ei~r~~~  329 (493)
T PTZ00421        287 FELMNERLTFCSSYSSVEPHKGLCMMPKW--SLDTRKCEIARFYA  329 (493)
T ss_pred             EEeeCCceEEEeeccCCCCCcceEecccc--cccccceeeeEEEE
Confidence            8887654332222 22223 466654322  23444455555444

>KOG0318|consensus

Probab=96.00  E-value=0.86  Score=38.93  Aligned_cols=178  Identities=12%  Similarity=0.097  Sum_probs=102.7

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE-eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEE
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV-SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW  115 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~  115 (232)
                      .++....+.+..|++.+.+..|| +-...+.|...+........+. ..+.+...+|+.+. .+.||-..+.   .++.+
T Consensus       314 ~~i~GHnK~ITaLtv~~d~~~i~-SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~-~~~~~t~g~D---d~l~~  388 (603)
T KOG0318|consen  314 KVISGHNKSITALTVSPDGKTIY-SGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASE-SGELFTIGWD---DTLRV  388 (603)
T ss_pred             heecccccceeEEEEcCCCCEEE-eeccCceEEEEecCCccccccccccccceEEEEeecC-CCcEEEEecC---CeEEE
Confidence            44445567889999998787777 5445588998887666554443 45667888999985 6889888876   34777


Q ss_pred             EeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeC
Q psy5751         116 SNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDW  192 (232)
Q Consensus       116 ~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~  192 (232)
                      .++.+..  ....+.-  -.+|-++++..+++.+.++-...  |.... +.+.... ..-.-.|.++|+. ++..+..-.
T Consensus       389 ~~~~~~~~t~~~~~~l--g~QP~~lav~~d~~~avv~~~~~--iv~l~-~~~~~~~-~~~~y~~s~vAv~~~~~~vaVGG  462 (603)
T KOG0318|consen  389 ISLKDNGYTKSEVVKL--GSQPKGLAVLSDGGTAVVACISD--IVLLQ-DQTKVSS-IPIGYESSAVAVSPDGSEVAVGG  462 (603)
T ss_pred             EecccCcccccceeec--CCCceeEEEcCCCCEEEEEecCc--EEEEe-cCCccee-eccccccceEEEcCCCCEEEEec
Confidence            7764433  2222222  56899999999866766654222  22221 1111111 1122335566764 333333344


Q ss_pred             CCCcEEEEeCCCCCcceEEeccCCcceeEEEEE
Q psy5751         193 KTNRIESANKEGERAPSIALDMMGTTYMYGIAA  225 (232)
Q Consensus       193 ~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~  225 (232)
                      ..++|......|...+...........+.-|+.
T Consensus       463 ~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vay  495 (603)
T KOG0318|consen  463 QDGKVHVYSLSGDELKEEAKLLEHRAAITDVAY  495 (603)
T ss_pred             ccceEEEEEecCCcccceeeeecccCCceEEEE
Confidence            556676666665443322222333444444443

>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides

Probab=95.91  E-value=0.028  Score=36.13  Aligned_cols=38  Identities=16%  Similarity=0.263  Sum_probs=33.4

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN   74 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~   74 (232)
                      +.+..++..|.||++++.++.||+++...+.|.++..+
T Consensus        47 ~~va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~   84 (86)
T PF01731_consen   47 KVVASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRH   84 (86)
T ss_pred             EEeeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence            45667889999999999999999999999999988754

The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.86  E-value=0.72  Score=38.07  Aligned_cols=116  Identities=9%  Similarity=0.120  Sum_probs=70.9

Q ss_pred             eEEEEeCCCCCCEEEEe----CCCCCceEEEEe-CCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEe
Q psy5751          67 TISMANLNDDQPKVIVS----KDLVNPRGIVVH-PYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVD  141 (232)
Q Consensus        67 ~I~~~~~~g~~~~~~~~----~~~~~p~~iavd-~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d  141 (232)
                      .+..|+......+.+..    .-+.....+... +.++.++|.....+-.+|+.++.++...+.+.... ..--.-+.+|
T Consensus       211 ~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~-~~V~~i~~~d  289 (353)
T PF00930_consen  211 DLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGD-WEVTSILGWD  289 (353)
T ss_dssp             EEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SS-S-EEEEEEEE
T ss_pred             EEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCc-eeecccceEc
Confidence            56677887666665554    123233345443 44555555443445678999999998866544443 2222457889


Q ss_pred             CCCCEEEEEECC----CCcEEEEecC-CCceEEEecCCCceEEEEEE
Q psy5751         142 FRTDELCWVDAD----SKSLECMTIR-NRVRRKVYSNCTYPFGLSIT  183 (232)
Q Consensus       142 ~~~~~Ly~~d~~----~~~i~~~~~~-g~~~~~~~~~~~~p~gla~~  183 (232)
                      ..++.||++-..    ..++++++++ ++..+.+-.....-..+++.
T Consensus       290 ~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~S  336 (353)
T PF00930_consen  290 EDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFS  336 (353)
T ss_dssp             CTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-
T ss_pred             CCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEEC
Confidence            999999999765    4589999999 77665554332222455553

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG0266|consensus

Probab=95.85  E-value=1  Score=38.65  Aligned_cols=192  Identities=12%  Similarity=0.105  Sum_probs=115.5

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEc-CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHL-DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      .++.|.+ ++...++-..+. +|...++ +.....+++......+.++++.+.+ ++.++-...+.|...+..+..+...
T Consensus       207 ~~~~fs~-d~~~l~s~s~D~-tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~  283 (456)
T KOG0266|consen  207 SDVAFSP-DGSYLLSGSDDK-TLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRK  283 (456)
T ss_pred             eeeEECC-CCcEEEEecCCc-eEEEeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEe
Confidence            3677777 444444545555 7777777 3323334444455778999999977 6777888888999999998666666


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE--EEEEcCCCCCc---ceEEEeCCCCEEEEEECCCCc
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE--IFLKAADLKLP---NSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~--~~~~~~~~~~p---~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      +..+.....++++.+ ++.++++...  .+.|...++......  ..+..  ...+   +.+.+++....| ++-...+.
T Consensus       284 l~~hs~~is~~~f~~-d~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~fsp~~~~l-l~~~~d~~  357 (456)
T KOG0266|consen  284 LKGHSDGISGLAFSP-DGNLLVSASY--DGTIRVWDLETGSKLCLKLLSG--AENSAPVTSVQFSPNGKYL-LSASLDRT  357 (456)
T ss_pred             eeccCCceEEEEECC-CCCEEEEcCC--CccEEEEECCCCceeeeecccC--CCCCCceeEEEECCCCcEE-EEecCCCe
Confidence            665666778899997 5666666533  466888888877743  22222  2333   678888875555 44455556


Q ss_pred             EEEEecCCCce-EEEecCCC---ceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         157 LECMTIRNRVR-RKVYSNCT---YPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       157 i~~~~~~g~~~-~~~~~~~~---~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +...++..... ........   -.+..... .+...++-...+.|...+..
T Consensus       358 ~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~  409 (456)
T KOG0266|consen  358 LKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSS  409 (456)
T ss_pred             EEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCC
Confidence            77767764332 22222111   11111112 44444444445666666665

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=95.76  E-value=1  Score=37.80  Aligned_cols=135  Identities=10%  Similarity=0.067  Sum_probs=77.5

Q ss_pred             CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCC
Q psy5751          55 NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLK  133 (232)
Q Consensus        55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~  133 (232)
                      ++.||++.. .+.++.+|.....  .+.......+..++++  ++.||+...   .++++.++....... .-... .-.
T Consensus       256 ~~~vy~~~~-~g~l~ald~~tG~--~~W~~~~~~~~~~~~~--~~~vy~~~~---~g~l~ald~~tG~~~-W~~~~~~~~  326 (394)
T PRK11138        256 GGVVYALAY-NGNLVALDLRSGQ--IVWKREYGSVNDFAVD--GGRIYLVDQ---NDRVYALDTRGGVEL-WSQSDLLHR  326 (394)
T ss_pred             CCEEEEEEc-CCeEEEEECCCCC--EEEeecCCCccCcEEE--CCEEEEEcC---CCeEEEEECCCCcEE-EcccccCCC
Confidence            578888775 3678888876543  2333334444556676  789999874   456888887654321 11111 001


Q ss_pred             CcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCC--CceEEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751         134 LPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNC--TYPFGLSITDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       134 ~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~--~~p~gla~~~~~ly~td~~~~~i~~~~~  202 (232)
                      .....++.  +++||+.+. .+.+..++.+.++...-....  ....+-++.+++||+... ++.|+.++.
T Consensus       327 ~~~sp~v~--~g~l~v~~~-~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~-~G~l~~~~~  393 (394)
T PRK11138        327 LLTAPVLY--NGYLVVGDS-EGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQAR-DGTVYAITR  393 (394)
T ss_pred             cccCCEEE--CCEEEEEeC-CCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeC-CceEEEEeC
Confidence            11222232  489998864 578888888765432222111  112233457889999865 466776653

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=95.74  E-value=0.077  Score=28.64  Aligned_cols=41  Identities=22%  Similarity=0.246  Sum_probs=30.7

Q ss_pred             cCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEe
Q psy5751          54 VNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVH   95 (232)
Q Consensus        54 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd   95 (232)
                      .++.||+++...+.|..+|.........+.. ...|.+|+++
T Consensus         2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~~   42 (42)
T TIGR02276         2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAVS   42 (42)
T ss_pred             CCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEeC
Confidence            3678999999999999999866554444443 5689998874

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>KOG0315|consensus

Probab=95.73  E-value=0.7  Score=35.81  Aligned_cols=192  Identities=11%  Similarity=0.097  Sum_probs=111.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~   80 (232)
                      ..++.|.....++ ++...++ .+...++....-+..+... .....+.+.+...-|+..|. ++.|.+.|+....+ ..
T Consensus        86 VtaVgF~~dgrWM-yTgseDg-t~kIWdlR~~~~qR~~~~~-spVn~vvlhpnQteLis~dq-sg~irvWDl~~~~c~~~  161 (311)
T KOG0315|consen   86 VTAVGFQCDGRWM-YTGSEDG-TVKIWDLRSLSCQRNYQHN-SPVNTVVLHPNQTELISGDQ-SGNIRVWDLGENSCTHE  161 (311)
T ss_pred             eEEEEEeecCeEE-EecCCCc-eEEEEeccCcccchhccCC-CCcceEEecCCcceEEeecC-CCcEEEEEccCCccccc
Confidence            3466677644444 4554555 6777777765444455443 56788889987777876664 47899999877643 45


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEE-cCCCCCcc----eEEEeCCCCEEEEEECCC
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLK-AADLKLPN----SLAVDFRTDELCWVDADS  154 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~-~~~~~~p~----~l~~d~~~~~Ly~~d~~~  154 (232)
                      ++.+.......++++| .|.+..+..++  +..+..++-+.. ...+.. .. ++..+    -.-++|++..| .+-+..
T Consensus       162 liPe~~~~i~sl~v~~-dgsml~a~nnk--G~cyvW~l~~~~~~s~l~P~~k-~~ah~~~il~C~lSPd~k~l-at~ssd  236 (311)
T KOG0315|consen  162 LIPEDDTSIQSLTVMP-DGSMLAAANNK--GNCYVWRLLNHQTASELEPVHK-FQAHNGHILRCLLSPDVKYL-ATCSSD  236 (311)
T ss_pred             cCCCCCcceeeEEEcC-CCcEEEEecCC--ccEEEEEccCCCccccceEhhh-eecccceEEEEEECCCCcEE-EeecCC
Confidence            5556666778999998 56666665553  445555543322 221111 11 22222    34567775554 444556


Q ss_pred             CcEEEEecCCC-ceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         155 KSLECMTIRNR-VRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       155 ~~i~~~~~~g~-~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      ..+...+.++- +.+...+ .-.+-++.++- ++...+|-...+.+..-+.
T Consensus       237 ktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~  287 (311)
T KOG0315|consen  237 KTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDL  287 (311)
T ss_pred             ceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccc
Confidence            66666667765 3333333 44678888884 4444455444444433333

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=95.67  E-value=0.66  Score=35.08  Aligned_cols=174  Identities=13%  Similarity=0.071  Sum_probs=97.5

Q ss_pred             EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCC----CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIR----SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~----~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      |+.++.  +.+|.+--..+ ++|++.++.+...  +.+..+.    -.+|++.-  ++.+|......+.-+..|.+....
T Consensus        50 GL~~~~--g~i~esTG~yg~S~ir~~~L~~gq~--~~s~~l~~~~~FgEGit~~--gd~~y~LTw~egvaf~~d~~t~~~  123 (262)
T COG3823          50 GLEYLD--GHILESTGLYGFSKIRVSDLTTGQE--IFSEKLAPDTVFGEGITKL--GDYFYQLTWKEGVAFKYDADTLEE  123 (262)
T ss_pred             ceeeeC--CEEEEeccccccceeEEEeccCceE--EEEeecCCccccccceeec--cceEEEEEeccceeEEEChHHhhh
Confidence            566653  57776643222 5899999996542  3333222    23454433  667777766667777777766543


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEcC--CCCCcceEEEeCCCCEEEEEECCC
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKAA--DLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~~--~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      --.++ --..-+|++-|  +..|.-+|..   ..+...+...-  ..++.+...  ....-|-|  ..-.|.||=--+.+
T Consensus       124 lg~~~-y~GeGWgLt~d--~~~LimsdGs---atL~frdP~tfa~~~~v~VT~~g~pv~~LNEL--E~VdG~lyANVw~t  195 (262)
T COG3823         124 LGRFS-YEGEGWGLTSD--DKNLIMSDGS---ATLQFRDPKTFAELDTVQVTDDGVPVSKLNEL--EWVDGELYANVWQT  195 (262)
T ss_pred             hcccc-cCCcceeeecC--CcceEeeCCc---eEEEecCHHHhhhcceEEEEECCeecccccce--eeeccEEEEeeeee
Confidence            32232 22345788877  5566666632   33444333221  112222211  11222222  22237787666778


Q ss_pred             CcEEEEecCCCceEEEec-------------CCCceEEEEEE--CCEEEEEe
Q psy5751         155 KSLECMTIRNRVRRKVYS-------------NCTYPFGLSIT--DEKYYWTD  191 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~~-------------~~~~p~gla~~--~~~ly~td  191 (232)
                      .+|.+++++.+++....+             +..-++|||.+  .+++|+|-
T Consensus       196 ~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         196 TRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             cceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            899999999887765532             23357899985  67899874

>KOG4649|consensus

Probab=95.67  E-value=0.78  Score=35.90  Aligned_cols=105  Identities=7%  Similarity=-0.100  Sum_probs=52.9

Q ss_pred             EEEeecCCeEEEEeCCCC-eEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE
Q psy5751          49 LTFDWVNRVLYWTDSQMD-TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL  127 (232)
Q Consensus        49 l~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~  127 (232)
                      +.+...++.|||.+..++ .++....-+...           ..-..|+..|.+|...-+   +..+..+....  -.+-
T Consensus        66 VV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk-----------~~a~~d~~~glIycgshd---~~~yalD~~~~--~cVy  129 (354)
T KOG4649|consen   66 VVLGCYSGGLYFLCVKTGSQIWNFVILETVK-----------VRAQCDFDGGLIYCGSHD---GNFYALDPKTY--GCVY  129 (354)
T ss_pred             EEEEEccCcEEEEEecchhheeeeeehhhhc-----------cceEEcCCCceEEEecCC---CcEEEeccccc--ceEE
Confidence            556666778888887776 455443322211           112344445666655432   23444433322  1111


Q ss_pred             EcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751         128 KAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus       128 ~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~  170 (232)
                      ... ....-.+-++++..+.||++- ..+.+.++.......+++
T Consensus       130 kskcgG~~f~sP~i~~g~~sly~a~-t~G~vlavt~~~~~~~~~  172 (354)
T KOG4649|consen  130 KSKCGGGTFVSPVIAPGDGSLYAAI-TAGAVLAVTKNPYSSTEF  172 (354)
T ss_pred             ecccCCceeccceecCCCceEEEEe-ccceEEEEccCCCCccee
Confidence            111 011223345677668999885 467777777765533333

>KOG4441|consensus

Probab=95.64  E-value=1.5  Score=38.87  Aligned_cols=209  Identities=12%  Similarity=0.075  Sum_probs=121.2

Q ss_pred             CCEEEEEEcCC-C----CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-----CeEEEEeCCCCCCEE
Q psy5751          11 EGQVYYSSVAD-K----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-----DTISMANLNDDQPKV   80 (232)
Q Consensus        11 ~~~ly~~d~~~-~----~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~   80 (232)
                      ++.||++--.+ +    ..+.+++........ +.+-...-.++++-..++.||.....+     ..+.++|.....=..
T Consensus       332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~  410 (571)
T KOG4441|consen  332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP  410 (571)
T ss_pred             CCEEEEEccccCCCcccceEEEecCCCCceec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccc
Confidence            56888886544 2    367888888766433 333223334555666689999886553     467788877765443


Q ss_pred             EEeCCCCC-ceEEEEeCCCCeEEEEEcCCC----CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--
Q psy5751          81 IVSKDLVN-PRGIVVHPYYRKLFWSDWNRS----GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--  153 (232)
Q Consensus        81 ~~~~~~~~-p~~iavd~~~~~ly~~d~~~~----~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--  153 (232)
                      +..  +.. -.+.++-..+|.||..-....    -..+.+++.....=+.+....  ..-.+..+-..++.||+.=..  
T Consensus       411 va~--m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~--~~R~~~g~a~~~~~iYvvGG~~~  486 (571)
T KOG4441|consen  411 VAP--MLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMN--TRRSGFGVAVLNGKIYVVGGFDG  486 (571)
T ss_pred             cCC--CCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcc--cccccceEEEECCEEEEECCccC
Confidence            332  111 223333334899999864211    145667766654433332221  112233344446899998332  


Q ss_pred             ---CCcEEEEecCCCceEEEec--CCCceEEEEEECCEEEEEeCCC-----CcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751         154 ---SKSLECMTIRNRVRRKVYS--NCTYPFGLSITDEKYYWTDWKT-----NRIESANKEGERAPSIALDMMGTTYMYGI  223 (232)
Q Consensus       154 ---~~~i~~~~~~g~~~~~~~~--~~~~p~gla~~~~~ly~td~~~-----~~i~~~~~~g~~~~~i~~~~~~~~~p~gi  223 (232)
                         ...|++.++....-+.+..  ......|++..++.+|+.-...     ..|...++....++.... ........|+
T Consensus       487 ~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~~~~~-~~~~~~~~~~  565 (571)
T KOG4441|consen  487 TSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDTWTEVTE-PESGRGGAGV  565 (571)
T ss_pred             CCccceEEEEcCCCCceeEcccCccccccccEEEECCEEEEEecccCccccceeEEcCCCCCceeeCCC-ccccccCcce
Confidence               3458899998876666632  2333458888999999985533     367777777777765543 3223333444


Q ss_pred             EE
Q psy5751         224 AA  225 (232)
Q Consensus       224 ~~  225 (232)
                      ++
T Consensus       566 ~~  567 (571)
T KOG4441|consen  566 AV  567 (571)
T ss_pred             EE
Confidence            44

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=95.53  E-value=1.1  Score=36.62  Aligned_cols=148  Identities=20%  Similarity=0.198  Sum_probs=82.5

Q ss_pred             EEEEcCCCCcEEEEEcCCCceeE-EEeC---CCCCc--cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC-
Q psy5751          15 YYSSVADKSSIKRAHLDGKNVED-VITT---NIRSP--EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV-   87 (232)
Q Consensus        15 y~~d~~~~~~i~~~~~~g~~~~~-~~~~---~~~~p--~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-   87 (232)
                      |.+-+.++ ++..+.++....++ ....   ....|  ..-+++..++.+||..+. +.|+..++.|...+..-.-++. 
T Consensus       150 F~~lC~DG-sl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~-G~v~~~dlsg~~~~~~~~~~~~t  227 (342)
T PF06433_consen  150 FSMLCGDG-SLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYE-GNVYSADLSGDSAKFGKPWSLLT  227 (342)
T ss_dssp             EEEEETTS-CEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTT-SEEEEEEETTSSEEEEEEEESS-
T ss_pred             eEEEecCC-ceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecC-CEEEEEeccCCcccccCcccccC
Confidence            44666677 88888887322211 1111   11111  122344456789987765 8999999999875443321110 


Q ss_pred             --------Cc---eEEEEeCCCCeEEEEEcCCC-------CCcEEEEeCCCCCcEEEEEcCCCC-CcceEEEeCCCC-EE
Q psy5751          88 --------NP---RGIVVHPYYRKLFWSDWNRS-------GPKIEWSNLDGTDREIFLKAADLK-LPNSLAVDFRTD-EL  147 (232)
Q Consensus        88 --------~p---~~iavd~~~~~ly~~d~~~~-------~~~I~~~~~~g~~~~~~~~~~~~~-~p~~l~~d~~~~-~L  147 (232)
                              +|   .-+|+++..++||+..-...       ...|+.+++....+..-+.   +. ...+|++..+.. .|
T Consensus       228 ~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~---l~~~~~Si~Vsqd~~P~L  304 (342)
T PF06433_consen  228 DAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP---LEHPIDSIAVSQDDKPLL  304 (342)
T ss_dssp             HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE---EEEEESEEEEESSSS-EE
T ss_pred             ccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe---CCCccceEEEccCCCcEE
Confidence                    22   24889988999998742111       2357777776554322222   22 234777777544 56


Q ss_pred             EEEECCCCcEEEEecCCCce
Q psy5751         148 CWVDADSKSLECMTIRNRVR  167 (232)
Q Consensus       148 y~~d~~~~~i~~~~~~g~~~  167 (232)
                      |-++..++.+..+|...++.
T Consensus       305 ~~~~~~~~~l~v~D~~tGk~  324 (342)
T PF06433_consen  305 YALSAGDGTLDVYDAATGKL  324 (342)
T ss_dssp             EEEETTTTEEEEEETTT--E
T ss_pred             EEEcCCCCeEEEEeCcCCcE
Confidence            65666667777777765543

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=95.48  E-value=1.4  Score=37.45  Aligned_cols=131  Identities=14%  Similarity=0.131  Sum_probs=89.4

Q ss_pred             eEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcc
Q psy5751          57 VLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPN  136 (232)
Q Consensus        57 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~  136 (232)
                      .+.+.+.....+.+.+.+|...+.+- ..+.+..++.+++.++.+-+++   ++.+|+.++++..+.+.+-... ..--.
T Consensus       373 ~~vigt~dgD~l~iyd~~~~e~kr~e-~~lg~I~av~vs~dGK~~vvaN---dr~el~vididngnv~~idkS~-~~lIt  447 (668)
T COG4946         373 GDVIGTNDGDKLGIYDKDGGEVKRIE-KDLGNIEAVKVSPDGKKVVVAN---DRFELWVIDIDNGNVRLIDKSE-YGLIT  447 (668)
T ss_pred             ceEEeccCCceEEEEecCCceEEEee-CCccceEEEEEcCCCcEEEEEc---CceEEEEEEecCCCeeEecccc-cceeE
Confidence            44455555568889999887765554 4888999999998666676666   3567999999988877765443 55667


Q ss_pred             eEEEeCCCCEEEEEEC---CCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC
Q psy5751         137 SLAVDFRTDELCWVDA---DSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW  192 (232)
Q Consensus       137 ~l~~d~~~~~Ly~~d~---~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~  192 (232)
                      ++++++.+.++=++=.   .+..|...+++|.+.-.+..-...-++=|++  ...||+-..
T Consensus       448 df~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs~  508 (668)
T COG4946         448 DFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLSA  508 (668)
T ss_pred             EEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEec
Confidence            7888887777655422   1456888889987765554433333444553  567887654

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=95.44  E-value=1.1  Score=37.85  Aligned_cols=63  Identities=11%  Similarity=0.111  Sum_probs=35.1

Q ss_pred             CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc------------------CCCCCcceEEEeCCCCEEEE
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA------------------ADLKLPNSLAVDFRTDELCW  149 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~------------------~~~~~p~~l~~d~~~~~Ly~  149 (232)
                      -+.+|.++...++||++.|.  .+.|.++++.......++..                  .....|+=|.++.+++||||
T Consensus       313 LitDI~iSlDDrfLYvs~W~--~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYv  390 (461)
T PF05694_consen  313 LITDILISLDDRFLYVSNWL--HGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYV  390 (461)
T ss_dssp             ----EEE-TTS-EEEEEETT--TTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEE
T ss_pred             ceEeEEEccCCCEEEEEccc--CCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEE
Confidence            35788888889999999998  56788888765543333221                  01236888999999999999


Q ss_pred             EEC
Q psy5751         150 VDA  152 (232)
Q Consensus       150 ~d~  152 (232)
                      |++
T Consensus       391 TnS  393 (461)
T PF05694_consen  391 TNS  393 (461)
T ss_dssp             E--
T ss_pred             Eee
Confidence            976

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG0279|consensus

Probab=95.43  E-value=0.98  Score=35.53  Aligned_cols=153  Identities=14%  Similarity=0.084  Sum_probs=95.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCC-CCeEEEEeCCCCCCEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQ-MDTISMANLNDDQPKVI   81 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~~   81 (232)
                      +++|++ +++-.++-..++ .|...+.-|.-.-++.... ......+.+.|.....|+.... .+.+.+.|+++...+.-
T Consensus       110 sva~s~-dn~qivSGSrDk-Tiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~  187 (315)
T KOG0279|consen  110 SVAFST-DNRQIVSGSRDK-TIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTT  187 (315)
T ss_pred             EEEecC-CCceeecCCCcc-eeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhc
Confidence            455555 333333333444 5555555554433333333 5678888898866455555544 56677889998776655


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      +-......+.++++| +|.|..+  +...++++..+++-+..  +..-......+.++|.|.  +.+.+-.....|...+
T Consensus       188 ~~gh~~~v~t~~vSp-DGslcas--Ggkdg~~~LwdL~~~k~--lysl~a~~~v~sl~fspn--rywL~~at~~sIkIwd  260 (315)
T KOG0279|consen  188 FIGHSGYVNTVTVSP-DGSLCAS--GGKDGEAMLWDLNEGKN--LYSLEAFDIVNSLCFSPN--RYWLCAATATSIKIWD  260 (315)
T ss_pred             cccccccEEEEEECC-CCCEEec--CCCCceEEEEEccCCce--eEeccCCCeEeeEEecCC--ceeEeeccCCceEEEe
Confidence            555666788999998 6777555  33468899999886544  222121556789999984  5555555555677777


Q ss_pred             cCCC
Q psy5751         162 IRNR  165 (232)
Q Consensus       162 ~~g~  165 (232)
                      ++..
T Consensus       261 l~~~  264 (315)
T KOG0279|consen  261 LESK  264 (315)
T ss_pred             ccch
Confidence            7754

>KOG0266|consensus

Probab=95.40  E-value=1.5  Score=37.57  Aligned_cols=192  Identities=12%  Similarity=0.101  Sum_probs=109.9

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC-CCCCCEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL-NDDQPKV   80 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~   80 (232)
                      .+.|.+..+. .++-..+. .+......+..  ....+......+.++++-+.+. ..++-.....|...+. +......
T Consensus       164 ~~~fs~~g~~-l~~~~~~~-~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~-~l~s~s~D~tiriwd~~~~~~~~~  240 (456)
T KOG0266|consen  164 CVDFSPDGRA-LAAASSDG-LIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGS-YLLSGSDDKTLRIWDLKDDGRNLK  240 (456)
T ss_pred             EEEEcCCCCe-EEEccCCC-cEEEeecccccchhhccccccccceeeeEECCCCc-EEEEecCCceEEEeeccCCCeEEE
Confidence            3556664445 33333333 45555554333  2122233446788899988554 4456666677888887 4433333


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .+........+++++|.. .+.++-..  .+.|...++.+......+... -..-+++++.+++ .++++-+..+.|...
T Consensus       241 ~l~gH~~~v~~~~f~p~g-~~i~Sgs~--D~tvriWd~~~~~~~~~l~~h-s~~is~~~f~~d~-~~l~s~s~d~~i~vw  315 (456)
T KOG0266|consen  241 TLKGHSTYVTSVAFSPDG-NLLVSGSD--DGTVRIWDVRTGECVRKLKGH-SDGISGLAFSPDG-NLLVSASYDGTIRVW  315 (456)
T ss_pred             EecCCCCceEEEEecCCC-CEEEEecC--CCcEEEEeccCCeEEEeeecc-CCceEEEEECCCC-CEEEEcCCCccEEEE
Confidence            444566677999999955 66666544  345776777653333333322 4567889999984 555555778899999


Q ss_pred             ecCCCceE--EEecCCCc--eE-EEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         161 TIRNRVRR--KVYSNCTY--PF-GLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       161 ~~~g~~~~--~~~~~~~~--p~-gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +..++...  ........  |. .+.+. ++...++-+..+.+...+..
T Consensus       316 d~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~  364 (456)
T KOG0266|consen  316 DLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR  364 (456)
T ss_pred             ECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc
Confidence            99877632  23332222  44 44443 44444555544455554444

>KOG4328|consensus

Probab=95.38  E-value=1.1  Score=37.67  Aligned_cols=197  Identities=15%  Similarity=0.162  Sum_probs=111.1

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--E
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--K   79 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~   79 (232)
                      +|.|.+.+-.-+++...++ .|.-.++++...++++..  .-....++.+....+.+|+.+.-. ...++|+.....  .
T Consensus       239 ~l~F~P~n~s~i~ssSyDG-tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-~f~~iD~R~~~s~~~  316 (498)
T KOG4328|consen  239 GLKFSPANTSQIYSSSYDG-TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-NFNVIDLRTDGSEYE  316 (498)
T ss_pred             ceEecCCChhheeeeccCc-eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc-ceEEEEeecCCccch
Confidence            5666664443333443445 688888887665555544  334556677776778888887653 455555433322  1


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe-CCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN-LDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~-~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                      .+.- +-....++++.|...+++.|...-+..+||-++ +.+.. ..++.. ..-...+...++|.++.| +|....++|
T Consensus       317 ~~~l-h~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~-sp~lst~~HrrsV~sAyFSPs~gtl-~TT~~D~~I  393 (498)
T KOG4328|consen  317 NLRL-HKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKA-SPFLSTLPHRRSVNSAYFSPSGGTL-LTTCQDNEI  393 (498)
T ss_pred             hhhh-hhcccceeecCCCCchheeecccCcceeeeehhhhcCCC-CcceecccccceeeeeEEcCCCCce-EeeccCCce
Confidence            1111 122778999999888888877655567787544 33332 222322 223456788999998995 454556666


Q ss_pred             EEEecC-----CCceEEEecC---CC--ceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         158 ECMTIR-----NRVRRKVYSN---CT--YPFGLSIT--DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       158 ~~~~~~-----g~~~~~~~~~---~~--~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      ..++-.     -....++...   ..  .|+-.+++  ...+++... ...|-.++..|++
T Consensus       394 Rv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~-~r~IDv~~~~~~q  453 (498)
T KOG4328|consen  394 RVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRY-PRPIDVFDGNGGQ  453 (498)
T ss_pred             EEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEecc-CcceeEEcCCCCE
Confidence            665542     1112233221   12  24444554  334444444 4668888887655

>KOG0318|consensus

Probab=95.33  E-value=1.6  Score=37.37  Aligned_cols=215  Identities=9%  Similarity=0.061  Sum_probs=114.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC---CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT---NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~---~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ...+.|.+ ++.+|.+--.++ +|+.++=.....--.+..   .-..+.+|+-.+....+- +-.....+...+......
T Consensus       193 V~~VRysP-DG~~Fat~gsDg-ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~-T~SaDkt~KIWdVs~~sl  269 (603)
T KOG0318|consen  193 VNCVRYSP-DGSRFATAGSDG-KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFL-TVSADKTIKIWDVSTNSL  269 (603)
T ss_pred             eeeEEECC-CCCeEEEecCCc-cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEE-EecCCceEEEEEeeccce
Confidence            34677887 577777776666 777665443322112221   123555566655454443 444445555555544433


Q ss_pred             EEEEe--CCC-CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          79 KVIVS--KDL-VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        79 ~~~~~--~~~-~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      ...+.  +.. .+..|+.  +.++.|......   +.|--.+.+......++.. .......|++.+++..||-+ +..+
T Consensus       270 v~t~~~~~~v~dqqvG~l--Wqkd~lItVSl~---G~in~ln~~d~~~~~~i~G-HnK~ITaLtv~~d~~~i~Sg-syDG  342 (603)
T KOG0318|consen  270 VSTWPMGSTVEDQQVGCL--WQKDHLITVSLS---GTINYLNPSDPSVLKVISG-HNKSITALTVSPDGKTIYSG-SYDG  342 (603)
T ss_pred             EEEeecCCchhceEEEEE--EeCCeEEEEEcC---cEEEEecccCCChhheecc-cccceeEEEEcCCCCEEEee-ccCc
Confidence            22221  111 1112221  113333332222   2233333332232222222 25667899999998888765 6688


Q ss_pred             cEEEEecCCCceEEEe--cCCCceEEEEEEC-CEEEEEeCCCCcEEEEeCCCCCcceEE-eccCCcceeEEEEEEcCC
Q psy5751         156 SLECMTIRNRVRRKVY--SNCTYPFGLSITD-EKYYWTDWKTNRIESANKEGERAPSIA-LDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~--~~~~~p~gla~~~-~~ly~td~~~~~i~~~~~~g~~~~~i~-~~~~~~~~p~gi~~~~~~  229 (232)
                      +|...+...+....+.  .......+++..+ +.|+-+-|. ..+.+++..+.....-. .+.  ...|.|+|+.+++
T Consensus       343 ~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~D-d~l~~~~~~~~~~t~~~~~~l--g~QP~~lav~~d~  417 (603)
T KOG0318|consen  343 HINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWD-DTLRVISLKDNGYTKSEVVKL--GSQPKGLAVLSDG  417 (603)
T ss_pred             eEEEEecCCccccccccccccceEEEEeecCCCcEEEEecC-CeEEEEecccCcccccceeec--CCCceeEEEcCCC
Confidence            8888887755443342  2455567889876 777777775 56888876533322111 111  4467899998874

>KOG4441|consensus

Probab=95.08  E-value=2.3  Score=37.71  Aligned_cols=172  Identities=15%  Similarity=0.127  Sum_probs=106.0

Q ss_pred             cEEEEeecCCeEEEEeCCC------CeEEEEeCCCCCCEEEEeCCCCCce---EEEEeCCCCeEEEEEcCC---CCCcEE
Q psy5751          47 EGLTFDWVNRVLYWTDSQM------DTISMANLNDDQPKVIVSKDLVNPR---GIVVHPYYRKLFWSDWNR---SGPKIE  114 (232)
Q Consensus        47 ~gl~~d~~~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~~~~~p~---~iavd~~~~~ly~~d~~~---~~~~I~  114 (232)
                      .++++-  ++.||++...+      ..+.++|.....=..+  ..+..++   ++++-  +|.||.....-   .-..++
T Consensus       326 ~~~~~~--~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~--a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE  399 (571)
T KOG4441|consen  326 VGVAVL--NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPV--APMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVE  399 (571)
T ss_pred             ccEEEE--CCEEEEEccccCCCcccceEEEecCCCCceecc--CCccCccccceeEEE--CCEEEEEeccccccccccEE
Confidence            445554  67999986554      4677777766542122  2344442   55555  89999985321   134577


Q ss_pred             EEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC------CCCcEEEEecCCCceEEEec--CCCceEEEEEECCE
Q psy5751         115 WSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA------DSKSLECMTIRNRVRRKVYS--NCTYPFGLSITDEK  186 (232)
Q Consensus       115 ~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~------~~~~i~~~~~~g~~~~~~~~--~~~~p~gla~~~~~  186 (232)
                      +++.....=..+....  ..-.+.++-..+++||.+-.      ....+.+.++....-+.+..  .-..-.|+++.++.
T Consensus       400 ~YDp~~~~W~~va~m~--~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~  477 (571)
T KOG4441|consen  400 CYDPVTNKWTPVAPML--TRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGK  477 (571)
T ss_pred             EecCCCCcccccCCCC--cceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECCE
Confidence            8877766544444332  23345555555699999843      23678899998776665544  22333578889999


Q ss_pred             EEEEeCCC-----CcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751         187 YYWTDWKT-----NRIESANKEGERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       187 ly~td~~~-----~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      ||+.-...     ..|.+.++...+++.+. +........|+++..
T Consensus       478 iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~-~m~~~rs~~g~~~~~  522 (571)
T KOG4441|consen  478 IYVVGGFDGTSALSSVERYDPETNQWTMVA-PMTSPRSAVGVVVLG  522 (571)
T ss_pred             EEEECCccCCCccceEEEEcCCCCceeEcc-cCccccccccEEEEC
Confidence            99985533     34888999988888663 233344455666554

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.06  E-value=1.8  Score=36.46  Aligned_cols=203  Identities=12%  Similarity=0.153  Sum_probs=112.3

Q ss_pred             EEEeCCCCEEEEEEcCCC---------CcEEEEEcCCCcee-EEEeCCCCCcc---EEEEeecCCeEEEEeCC--C-CeE
Q psy5751           5 ITVDCVEGQVYYSSVADK---------SSIKRAHLDGKNVE-DVITTNIRSPE---GLTFDWVNRVLYWTDSQ--M-DTI   68 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~---------~~i~~~~~~g~~~~-~~~~~~~~~p~---gl~~d~~~~~ly~~d~~--~-~~I   68 (232)
                      +.|...+..+|++.....         .+|++..+.....+ +++-.....+.   ++.....++.|++.-..  + ..+
T Consensus       175 ~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v  254 (414)
T PF02897_consen  175 VSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEV  254 (414)
T ss_dssp             EEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEE
T ss_pred             EEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeE
Confidence            788887789999986552         14777777655433 23333223333   67777777887765433  3 579


Q ss_pred             EEEeCCCC-----CCEEEEeCCCCCceEEEEeCCCCeEEE-EEcCCCCCcEEEEeCCCCCc---E-EEEEcCCCCCcceE
Q psy5751          69 SMANLNDD-----QPKVIVSKDLVNPRGIVVHPYYRKLFW-SDWNRSGPKIEWSNLDGTDR---E-IFLKAADLKLPNSL  138 (232)
Q Consensus        69 ~~~~~~g~-----~~~~~~~~~~~~p~~iavd~~~~~ly~-~d~~~~~~~I~~~~~~g~~~---~-~~~~~~~~~~p~~l  138 (232)
                      +.++++..     ..+.+.. ........+-. .++.+|+ ++.+...++|.+++++....   . +++....-..-.++
T Consensus       255 ~~~d~~~~~~~~~~~~~l~~-~~~~~~~~v~~-~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~  332 (414)
T PF02897_consen  255 YLLDLDDGGSPDAKPKLLSP-REDGVEYYVDH-HGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDV  332 (414)
T ss_dssp             EEEECCCTTTSS-SEEEEEE-SSSS-EEEEEE-ETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEE
T ss_pred             EEEeccccCCCcCCcEEEeC-CCCceEEEEEc-cCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEE
Confidence            99998874     3344444 22223222222 2777775 66666688999999987763   3 44443212234566


Q ss_pred             EEeCCCCEEEEEECC--CCcEEEEecC-CCceEEE-ecCCCceEEEEE--ECCEEEEEeC--CC-CcEEEEeCCCCCcce
Q psy5751         139 AVDFRTDELCWVDAD--SKSLECMTIR-NRVRRKV-YSNCTYPFGLSI--TDEKYYWTDW--KT-NRIESANKEGERAPS  209 (232)
Q Consensus       139 ~~d~~~~~Ly~~d~~--~~~i~~~~~~-g~~~~~~-~~~~~~p~gla~--~~~~ly~td~--~~-~~i~~~~~~g~~~~~  209 (232)
                      .+.  +++|++....  ..+|..++++ +.....+ .-......++..  .++.++++-.  .. ..+++++......+.
T Consensus       333 ~~~--~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~  410 (414)
T PF02897_consen  333 SLF--KDYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTL  410 (414)
T ss_dssp             EEE--TTEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEE
T ss_pred             EEE--CCEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEE
Confidence            555  4678777554  4588888998 5444333 222222234432  2455555532  22 477777777666554


Q ss_pred             EE
Q psy5751         210 IA  211 (232)
Q Consensus       210 i~  211 (232)
                      ++
T Consensus       411 ~k  412 (414)
T PF02897_consen  411 LK  412 (414)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG0292|consensus

Probab=95.04  E-value=0.67  Score=42.22  Aligned_cols=154  Identities=12%  Similarity=0.081  Sum_probs=104.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      -|++|++..-++ .+...++ .|+..+-. |.-..+.. +.-...+|+++++ .+-||++......|-+.+++...+...
T Consensus        13 KglsFHP~rPwI-LtslHsG-~IQlWDYRM~tli~rFd-eHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrclft   88 (1202)
T KOG0292|consen   13 KGLSFHPKRPWI-LTSLHSG-VIQLWDYRMGTLIDRFD-EHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCLFT   88 (1202)
T ss_pred             cceecCCCCCEE-EEeecCc-eeeeehhhhhhHHhhhh-ccCCccceeeecC-CCCeEEecCCccEEEEEecccceehhh
Confidence            488999954444 4555555 78776655 32222222 2335779999998 678999988888999999987665544


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      +-.++...+.+.+++.-=++.-+.   +.-.|+..+........++..- -++..+-.|+|. ..|.++-+-...|...|
T Consensus        89 L~GHlDYVRt~~FHheyPWIlSAS---DDQTIrIWNwqsr~~iavltGH-nHYVMcAqFhpt-EDlIVSaSLDQTVRVWD  163 (1202)
T KOG0292|consen   89 LLGHLDYVRTVFFHHEYPWILSAS---DDQTIRIWNWQSRKCIAVLTGH-NHYVMCAQFHPT-EDLIVSASLDQTVRVWD  163 (1202)
T ss_pred             hccccceeEEeeccCCCceEEEcc---CCCeEEEEeccCCceEEEEecC-ceEEEeeccCCc-cceEEEecccceEEEEe
Confidence            446888888888887555444333   2345888888777666555543 566677778886 56667767666777777


Q ss_pred             cCCC
Q psy5751         162 IRNR  165 (232)
Q Consensus       162 ~~g~  165 (232)
                      +.|.
T Consensus       164 isGL  167 (1202)
T KOG0292|consen  164 ISGL  167 (1202)
T ss_pred             ecch
Confidence            7654

>KOG0310|consensus

Probab=95.03  E-value=1.9  Score=36.45  Aligned_cols=183  Identities=12%  Similarity=0.056  Sum_probs=116.5

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      -+-|.+.++.++.+-..+. .+...++++...+.-+...-......++.+.++.+.++..-.+.|...|...... .+.+
T Consensus       115 ~~~f~~~d~t~l~s~sDd~-v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~-~v~e  192 (487)
T KOG0310|consen  115 VTKFSPQDNTMLVSGSDDK-VVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS-RVVE  192 (487)
T ss_pred             EEEecccCCeEEEecCCCc-eEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc-eeEE
Confidence            4567888889888876666 6777788876653334444467888899998999999998899999999877642 2333


Q ss_pred             CCCCCc-eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          84 KDLVNP-RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        84 ~~~~~p-~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      -+-..| ..+..-| .|.++.+..+   +.+...++-++...+...........+|.+..++.+|+-+ +-.++|..++.
T Consensus       193 lnhg~pVe~vl~lp-sgs~iasAgG---n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~-sLD~~VKVfd~  267 (487)
T KOG0310|consen  193 LNHGCPVESVLALP-SGSLIASAGG---NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSG-SLDRHVKVFDT  267 (487)
T ss_pred             ecCCCceeeEEEcC-CCCEEEEcCC---CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeec-ccccceEEEEc
Confidence            122344 4555554 7777777754   4577788875544333222125667899999888888754 44677777764


Q ss_pred             CCCceEEEec-CCCce-EEEEEE-CCEEEEEeCCCC
Q psy5751         163 RNRVRRKVYS-NCTYP-FGLSIT-DEKYYWTDWKTN  195 (232)
Q Consensus       163 ~g~~~~~~~~-~~~~p-~gla~~-~~~ly~td~~~~  195 (232)
                      +  +-+++.+ ..+.| .++++. ++.-.+.-..++
T Consensus       268 t--~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnG  301 (487)
T KOG0310|consen  268 T--NYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNG  301 (487)
T ss_pred             c--ceEEEEeeecccceeeEEecCCCceEEEecccc
Confidence            3  4444544 44444 467763 333333333333

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=94.99  E-value=1.1  Score=33.62  Aligned_cols=123  Identities=7%  Similarity=-0.021  Sum_probs=77.9

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC-CCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS-QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLF  102 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly  102 (232)
                      .|+.++..+.....+-...-..+..++..+.++.+.+... ....|...+.++.....+   .....+.+..+|.++.|.
T Consensus        40 ~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~---~~~~~n~i~wsP~G~~l~  116 (194)
T PF08662_consen   40 ELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSF---GTQPRNTISWSPDGRFLV  116 (194)
T ss_pred             EEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEee---cCCCceEEEECCCCCEEE
Confidence            5777766665544443332234788888887777766543 345788888874443333   234556899999777777


Q ss_pred             EEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751         103 WSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus       103 ~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      .+..+...+.+...+.+  ..+.+.... ......++.+|++..+..+.+
T Consensus       117 ~~g~~n~~G~l~~wd~~--~~~~i~~~~-~~~~t~~~WsPdGr~~~ta~t  163 (194)
T PF08662_consen  117 LAGFGNLNGDLEFWDVR--KKKKISTFE-HSDATDVEWSPDGRYLATATT  163 (194)
T ss_pred             EEEccCCCcEEEEEECC--CCEEeeccc-cCcEEEEEEcCCCCEEEEEEe
Confidence            66655335678887777  334444433 456789999999777665543

>KOG0281|consensus

Probab=94.95  E-value=0.29  Score=39.59  Aligned_cols=144  Identities=11%  Similarity=0.093  Sum_probs=90.6

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD  122 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~  122 (232)
                      .....+.+|   +++.++.+....|.+.|.+...+ ++++. .-....++.+.  +|.+.-+...   ..|.+.+|+...
T Consensus       238 GSVLCLqyd---~rviisGSSDsTvrvWDv~tge~l~tlih-HceaVLhlrf~--ng~mvtcSkD---rsiaVWdm~sps  308 (499)
T KOG0281|consen  238 GSVLCLQYD---ERVIVSGSSDSTVRVWDVNTGEPLNTLIH-HCEAVLHLRFS--NGYMVTCSKD---RSIAVWDMASPT  308 (499)
T ss_pred             CcEEeeecc---ceEEEecCCCceEEEEeccCCchhhHHhh-hcceeEEEEEe--CCEEEEecCC---ceeEEEeccCch
Confidence            344444444   34778888888899988776553 44443 44556677777  7766555433   346667776654


Q ss_pred             c----EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCc
Q psy5751         123 R----EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNR  196 (232)
Q Consensus       123 ~----~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~  196 (232)
                      .    .+++..  ....|-+.+|   .++.++.++...|...+++...-  +...-.+-.|+|.  +.|++.++-+..+.
T Consensus       309 ~it~rrVLvGH--rAaVNvVdfd---~kyIVsASgDRTikvW~~st~ef--vRtl~gHkRGIAClQYr~rlvVSGSSDnt  381 (499)
T KOG0281|consen  309 DITLRRVLVGH--RAAVNVVDFD---DKYIVSASGDRTIKVWSTSTCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDNT  381 (499)
T ss_pred             HHHHHHHHhhh--hhheeeeccc---cceEEEecCCceEEEEeccceee--ehhhhcccccceehhccCeEEEecCCCce
Confidence            2    222222  4556666555   44667777777787777775432  1223345567775  68999999888888


Q ss_pred             EEEEeCC
Q psy5751         197 IESANKE  203 (232)
Q Consensus       197 i~~~~~~  203 (232)
                      |...+..
T Consensus       382 IRlwdi~  388 (499)
T KOG0281|consen  382 IRLWDIE  388 (499)
T ss_pred             EEEEecc
Confidence            8877754

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.88  E-value=2  Score=36.14  Aligned_cols=205  Identities=13%  Similarity=0.135  Sum_probs=120.3

Q ss_pred             EEEEeCCCCEEEEE-EcCCC--CcEEEEEcCCCceeEEEeCCCC--CccEEEEeecCCeEEEEeCCC----------CeE
Q psy5751           4 GITVDCVEGQVYYS-SVADK--SSIKRAHLDGKNVEDVITTNIR--SPEGLTFDWVNRVLYWTDSQM----------DTI   68 (232)
Q Consensus         4 ~i~~d~~~~~ly~~-d~~~~--~~i~~~~~~g~~~~~~~~~~~~--~p~gl~~d~~~~~ly~~d~~~----------~~I   68 (232)
                      ++.+.+..+.|-++ |.++.  ..|+.+++..+..   +...+.  ...+++....+..+|++....          ..|
T Consensus       128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~---l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v  204 (414)
T PF02897_consen  128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKF---LPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV  204 (414)
T ss_dssp             EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEE---EEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred             eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcC---cCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence            56777777777665 54433  3588888876532   222222  223366665556777776332          347


Q ss_pred             EEEeCCCCCCE--EEEeCCCC-C-ceEEEEeCCCCeEEEEEcCCCC-CcEEEEeCCCC-----CcEEEEEcCCCCCcceE
Q psy5751          69 SMANLNDDQPK--VIVSKDLV-N-PRGIVVHPYYRKLFWSDWNRSG-PKIEWSNLDGT-----DREIFLKAADLKLPNSL  138 (232)
Q Consensus        69 ~~~~~~g~~~~--~~~~~~~~-~-p~~iavd~~~~~ly~~d~~~~~-~~I~~~~~~g~-----~~~~~~~~~~~~~p~~l  138 (232)
                      ++..+......  .++..... . -.++..++.++.|++....... ..++..+++..     ....+...  ...... 
T Consensus       205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~--~~~~~~-  281 (414)
T PF02897_consen  205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPR--EDGVEY-  281 (414)
T ss_dssp             EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEES--SSS-EE-
T ss_pred             EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCC--CCceEE-
Confidence            88888776543  55553221 1 3477888888888887665444 67899998874     33444332  222221 


Q ss_pred             EEeCCCCEEEEE-ECC--CCcEEEEecCCCc----eEEEecCC--CceEEEEEECCEEEEEeCCC--CcEEEEeCC-CCC
Q psy5751         139 AVDFRTDELCWV-DAD--SKSLECMTIRNRV----RRKVYSNC--TYPFGLSITDEKYYWTDWKT--NRIESANKE-GER  206 (232)
Q Consensus       139 ~~d~~~~~Ly~~-d~~--~~~i~~~~~~g~~----~~~~~~~~--~~p~gla~~~~~ly~td~~~--~~i~~~~~~-g~~  206 (232)
                      .++..++.+|+. +..  .++|.+++++...    ...+....  ....++.+++++|++....+  .+|..++.. +..
T Consensus       282 ~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~  361 (414)
T PF02897_consen  282 YVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKE  361 (414)
T ss_dssp             EEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEE
T ss_pred             EEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcE
Confidence            223335777764 432  5689999998654    22444432  35678888999999885544  578888888 666


Q ss_pred             cceEEecc
Q psy5751         207 APSIALDM  214 (232)
Q Consensus       207 ~~~i~~~~  214 (232)
                      ...+..+.
T Consensus       362 ~~~~~~p~  369 (414)
T PF02897_consen  362 SREIPLPE  369 (414)
T ss_dssp             EEEEESSS
T ss_pred             EeeecCCc
Confidence            66665544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG1539|consensus

Probab=94.88  E-value=2.9  Score=37.89  Aligned_cols=155  Identities=12%  Similarity=0.044  Sum_probs=88.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE---eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI---TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~---~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      +.+++.+...+..|..-.. + .|-+++++.+-...-.   ...-....|+++|..++ +-++-...|.+...+......
T Consensus       451 ~~av~vs~CGNF~~IG~S~-G-~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~-~~vsa~~~Gilkfw~f~~k~l  527 (910)
T KOG1539|consen  451 ATAVCVSFCGNFVFIGYSK-G-TIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNR-LLVSAGADGILKFWDFKKKVL  527 (910)
T ss_pred             eEEEEEeccCceEEEeccC-C-eEEEEEcccCeeecccccCccccCceeEEEecCCCc-eEEEccCcceEEEEecCCcce
Confidence            4567777777777764433 3 6899999854322222   11225789999998554 555666667888888877653


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                      ..-+. -...+..+..+.. ..++....+  .-+|..++.....+.-.+.. .-..-++++|++++++|..+ ...+.|.
T Consensus       528 ~~~l~-l~~~~~~iv~hr~-s~l~a~~~d--df~I~vvD~~t~kvvR~f~g-h~nritd~~FS~DgrWlisa-smD~tIr  601 (910)
T KOG1539|consen  528 KKSLR-LGSSITGIVYHRV-SDLLAIALD--DFSIRVVDVVTRKVVREFWG-HGNRITDMTFSPDGRWLISA-SMDSTIR  601 (910)
T ss_pred             eeeec-cCCCcceeeeeeh-hhhhhhhcC--ceeEEEEEchhhhhhHHhhc-cccceeeeEeCCCCcEEEEe-ecCCcEE
Confidence            22222 1123344544432 223332222  23455555543322211211 14567899999998888766 4456677


Q ss_pred             EEecCCC
Q psy5751         159 CMTIRNR  165 (232)
Q Consensus       159 ~~~~~g~  165 (232)
                      ..|+..+
T Consensus       602 ~wDlpt~  608 (910)
T KOG1539|consen  602 TWDLPTG  608 (910)
T ss_pred             EEeccCc
Confidence            7777644

>PTZ00420 coronin; Provisional

Probab=94.83  E-value=2.6  Score=37.20  Aligned_cols=219  Identities=6%  Similarity=0.005  Sum_probs=116.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--ee------EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VE------DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN   74 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~------~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~   74 (232)
                      .+++|++..+.++++-..++ .|...++....  ..      ..+......+..+++.+.+..++.+-...+.|...|+.
T Consensus        78 ~~lafsP~~~~lLASgS~Dg-tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~  156 (568)
T PTZ00420         78 LDLQFNPCFSEILASGSEDL-TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIE  156 (568)
T ss_pred             EEEEEcCCCCCEEEEEeCCC-eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECC
Confidence            47888886455555555555 78877876321  11      12222335678889998777777666667889999987


Q ss_pred             CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEE-----EeCCCCEEEE
Q psy5751          75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLA-----VDFRTDELCW  149 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~-----~d~~~~~Ly~  149 (232)
                      .......+. ......+++.++ .|.++.+...  ..+|...++........+... ........     +.++++.|..
T Consensus       157 tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~--D~~IrIwD~Rsg~~i~tl~gH-~g~~~s~~v~~~~fs~d~~~IlT  231 (568)
T PTZ00420        157 NEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCV--GKHMHIIDPRKQEIASSFHIH-DGGKNTKNIWIDGLGGDDNYILS  231 (568)
T ss_pred             CCcEEEEEe-cCCcEEEEEECC-CCCEEEEEec--CCEEEEEECCCCcEEEEEecc-cCCceeEEEEeeeEcCCCCEEEE
Confidence            655433332 234577899998 5555555432  356778887755432222211 11111122     2244455544


Q ss_pred             EECC---CCcEEEEecCCC-ceEEEecCCCceEEEE--EE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCccee-
Q psy5751         150 VDAD---SKSLECMTIRNR-VRRKVYSNCTYPFGLS--IT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYM-  220 (232)
Q Consensus       150 ~d~~---~~~i~~~~~~g~-~~~~~~~~~~~p~gla--~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p-  220 (232)
                      +-..   ...|...+++.. ........-..+..|.  ++  .+.+|++-.+.+.|+.+....+....+  ..+....| 
T Consensus       232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l--~~~~s~~p~  309 (568)
T PTZ00420        232 TGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKV--NEYKSCSPF  309 (568)
T ss_pred             EEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEee--cccccCCCc
Confidence            3222   135777776632 2211112111222222  22  477888877788888888764332222  22333333 


Q ss_pred             EEEEEEcCC
Q psy5751         221 YGIAAVPSS  229 (232)
Q Consensus       221 ~gi~~~~~~  229 (232)
                      .|+++.+..
T Consensus       310 ~g~~f~Pkr  318 (568)
T PTZ00420        310 RSFGFLPKQ  318 (568)
T ss_pred             cceEEcccc
Confidence            456666654

>KOG0268|consensus

Probab=94.77  E-value=0.78  Score=37.41  Aligned_cols=133  Identities=13%  Similarity=0.163  Sum_probs=90.7

Q ss_pred             ccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751          46 PEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR  123 (232)
Q Consensus        46 p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~  123 (232)
                      ...+.+.+..-.|.-+....+.|..+|+....+  ++++.   -++++|+-.| +...|++...  ...++..+|..-..
T Consensus       190 i~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~---mRTN~IswnP-eafnF~~a~E--D~nlY~~DmR~l~~  263 (433)
T KOG0268|consen  190 ISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT---MRTNTICWNP-EAFNFVAANE--DHNLYTYDMRNLSR  263 (433)
T ss_pred             eeEEecCCCcchheeeeccCCceEEEecccCCccceeeee---ccccceecCc-cccceeeccc--cccceehhhhhhcc
Confidence            355556666666666665667888888765543  33332   3788999999 8888877643  55688888765544


Q ss_pred             EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEe--cCCCceEEEEEECC
Q psy5751         124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY--SNCTYPFGLSITDE  185 (232)
Q Consensus       124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~--~~~~~p~gla~~~~  185 (232)
                      .+-+..+......++.++|. |.=|++-+....|..+..+.+..+.++  ...++..++.+-.+
T Consensus       264 p~~v~~dhvsAV~dVdfspt-G~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~D  326 (433)
T KOG0268|consen  264 PLNVHKDHVSAVMDVDFSPT-GQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMD  326 (433)
T ss_pred             cchhhcccceeEEEeccCCC-cchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEecc
Confidence            44443333556667788887 677788888888988888876665553  38888999988533

>PTZ00420 coronin; Provisional

Probab=94.74  E-value=2.8  Score=37.06  Aligned_cols=193  Identities=10%  Similarity=0.008  Sum_probs=105.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++....++.+-..++ .|...++........+.. ...+.++++++.+. ++.+....+.|...|+........+
T Consensus       129 ~sVaf~P~g~~iLaSgS~Dg-tIrIWDl~tg~~~~~i~~-~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~~i~tl  205 (568)
T PTZ00420        129 SIIDWNPMNYYIMCSSGFDS-FVNIWDIENEKRAFQINM-PKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQEIASSF  205 (568)
T ss_pred             EEEEECCCCCeEEEEEeCCC-eEEEEECCCCcEEEEEec-CCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCcEEEEE
Confidence            46788886666666655556 788888875543222222 24678888888555 5555556678999998765543333


Q ss_pred             eCCCCCceEEEE-----eCCCCeEEEEEcCC-CCCcEEEEeCCCCC--cEEEEEcCCCCCcceE--EEeCCCCEEEEEEC
Q psy5751          83 SKDLVNPRGIVV-----HPYYRKLFWSDWNR-SGPKIEWSNLDGTD--REIFLKAADLKLPNSL--AVDFRTDELCWVDA  152 (232)
Q Consensus        83 ~~~~~~p~~iav-----d~~~~~ly~~d~~~-~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l--~~d~~~~~Ly~~d~  152 (232)
                      ..+.......++     .+..+.|..+.... ...+|...++....  ...+...   ..+..|  ..|++.+.+|++=.
T Consensus       206 ~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld---~~~~~L~p~~D~~tg~l~lsGk  282 (568)
T PTZ00420        206 HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSID---NASAPLIPHYDESTGLIYLIGK  282 (568)
T ss_pred             ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEec---CCccceEEeeeCCCCCEEEEEE
Confidence            322211111222     24345555544332 12357777766422  2222111   122332  55777789999888


Q ss_pred             CCCcEEEEecCCCceEEEec-CCCce-EEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         153 DSKSLECMTIRNRVRRKVYS-NCTYP-FGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       153 ~~~~i~~~~~~g~~~~~~~~-~~~~p-~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      +.+.|...++.......+.+ ....| .|+++.-.+.  +|.....|.|+-+.
T Consensus       283 GD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr~--~dv~~cEi~R~~kl  333 (568)
T PTZ00420        283 GDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQI--CDVYKCEIGRVYKN  333 (568)
T ss_pred             CCCeEEEEEccCCcEEeecccccCCCccceEEccccc--cCchhhhHhHHhhh
Confidence            88888888887554444433 22233 3666643331  34444555555443

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.58  E-value=2.2  Score=35.20  Aligned_cols=142  Identities=8%  Similarity=0.055  Sum_probs=78.6

Q ss_pred             EEEEeCCCCEEEEE--EcCCC-CcEEEEEcCCCceeEEEeC----CCCCccEEEEe-ecCC-eEEEEeCC-CCeEEEEeC
Q psy5751           4 GITVDCVEGQVYYS--SVADK-SSIKRAHLDGKNVEDVITT----NIRSPEGLTFD-WVNR-VLYWTDSQ-MDTISMANL   73 (232)
Q Consensus         4 ~i~~d~~~~~ly~~--d~~~~-~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d-~~~~-~ly~~d~~-~~~I~~~~~   73 (232)
                      .+.|...++.|++.  +-..+ ..+..++......+.+...    -+.....+.+- ..++ .|++++.. -.+|+.++.
T Consensus       188 ~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~  267 (353)
T PF00930_consen  188 RVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDL  267 (353)
T ss_dssp             EEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEET
T ss_pred             cceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcc
Confidence            45565544434433  33333 2466666654433333321    12223344432 2344 44445532 257999999


Q ss_pred             CCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcC--CCCCcEEEEeCC-CCCcEEEEEcCCCCCc-ceEEEeCCCCEEE
Q psy5751          74 NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWN--RSGPKIEWSNLD-GTDREIFLKAADLKLP-NSLAVDFRTDELC  148 (232)
Q Consensus        74 ~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~--~~~~~I~~~~~~-g~~~~~~~~~~~~~~p-~~l~~d~~~~~Ly  148 (232)
                      +|...+.+......--.-+.+|+.++.||++...  ....++++++++ +...+.+...   ... ..++++++++.+.
T Consensus       268 ~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~---~~~~~~~~~Spdg~y~v  343 (353)
T PF00930_consen  268 DGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCE---DGDHYSASFSPDGKYYV  343 (353)
T ss_dssp             TSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTT---SSTTEEEEE-TTSSEEE
T ss_pred             cccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCC---CCCceEEEECCCCCEEE
Confidence            9987665544333222347799989999999865  236689999999 6665554333   233 4889999755543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PRK13616 lipoprotein LpqB; Provisional

Probab=94.48  E-value=3.3  Score=36.82  Aligned_cols=178  Identities=12%  Similarity=0.020  Sum_probs=98.7

Q ss_pred             EEEEeCCCCEEEEEEc------CCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC-----------CC
Q psy5751           4 GITVDCVEGQVYYSSV------ADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ-----------MD   66 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~------~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~-----------~~   66 (232)
                      +.++.+..+.+.++..      ...+.|+.++..+.. ..+...  ..-..-.+++.++.|++....           .+
T Consensus       354 spaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~g  430 (591)
T PRK13616        354 SAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATG  430 (591)
T ss_pred             cceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-eeeecC--CCCCCceECCCCCceEEEecCcceEEEeccCCCc
Confidence            4566676666655541      111378888875544 333322  123344556655666655322           34


Q ss_pred             eEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEE---EeCCCCCcEE-----EEEcCCCCC-cce
Q psy5751          67 TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW---SNLDGTDREI-----FLKAADLKL-PNS  137 (232)
Q Consensus        67 ~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~---~~~~g~~~~~-----~~~~~~~~~-p~~  137 (232)
                      .|++..+++.....  . --..+..+.+.|...+|.+.-.    ++|+.   ...++...++     +...  +.. +..
T Consensus       431 ql~~~~vd~ge~~~--~-~~g~Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~~~l~~~~~l~~~--l~~~~~~  501 (591)
T PRK13616        431 QLARTPVDASAVAS--R-VPGPISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQYALTNPREVGPG--LGDTAVS  501 (591)
T ss_pred             eEEEEeccCchhhh--c-cCCCcCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCceeecccEEeecc--cCCcccc
Confidence            55555555543322  1 1235778889988888887662    35766   4434443222     2221  333 466


Q ss_pred             EEEeCCCCEEEEEECC-CCcEEEEecCCCceEEEec-CCCce-EEEEEECCEEEEEeCCC
Q psy5751         138 LAVDFRTDELCWVDAD-SKSLECMTIRNRVRRKVYS-NCTYP-FGLSITDEKYYWTDWKT  194 (232)
Q Consensus       138 l~~d~~~~~Ly~~d~~-~~~i~~~~~~g~~~~~~~~-~~~~p-~gla~~~~~ly~td~~~  194 (232)
                      +..-.+ +.|++.... ...++++.+||...+.+.. ++..| ..|+...+.+|+++...
T Consensus       502 l~W~~~-~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~~iyv~~~~g  560 (591)
T PRK13616        502 LDWRTG-DSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPSTVYVTDARA  560 (591)
T ss_pred             ceEecC-CEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCceEEEEcCCc
Confidence            666665 557666443 4579999999987665322 33333 35555567899998653

>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []

Probab=94.45  E-value=1.9  Score=33.83  Aligned_cols=139  Identities=15%  Similarity=0.110  Sum_probs=80.5

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCcee-EEEeCC------------CCCccEEEEeecCCeEEEE---eCCCCeEEEEeC-
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVE-DVITTN------------IRSPEGLTFDWVNRVLYWT---DSQMDTISMANL-   73 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~-~~~~~~------------~~~p~gl~~d~~~~~ly~~---d~~~~~I~~~~~-   73 (232)
                      ++.||+--.... .|.|+++...... ....++            -..--.+|+|+ ++ |++.   ....+.|.+..+ 
T Consensus        78 ngslYY~~~~s~-~IvkydL~t~~v~~~~~L~~A~~~n~~~y~~~~~t~iD~AvDE-~G-LWvIYat~~~~g~ivvskld  154 (250)
T PF02191_consen   78 NGSLYYNKYNSR-NIVKYDLTTRSVVARRELPGAGYNNRFPYYWSGYTDIDFAVDE-NG-LWVIYATEDNNGNIVVSKLD  154 (250)
T ss_pred             CCcEEEEecCCc-eEEEEECcCCcEEEEEECCccccccccceecCCCceEEEEEcC-CC-EEEEEecCCCCCcEEEEeeC
Confidence            578888877777 9999999976654 222221            11225688886 33 4443   444445665544 


Q ss_pred             -CCCCCEEEEeCCCCCce-EEEEeCCCCeEEEEEcCCCC-CcEE-EEeCCCCCcE---EEEEcCCCCCcceEEEeCCCCE
Q psy5751          74 -NDDQPKVIVSKDLVNPR-GIVVHPYYRKLFWSDWNRSG-PKIE-WSNLDGTDRE---IFLKAADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        74 -~g~~~~~~~~~~~~~p~-~iavd~~~~~ly~~d~~~~~-~~I~-~~~~~g~~~~---~~~~~~~~~~p~~l~~d~~~~~  146 (232)
                       +....+.........+. +-|+- ..|.||.++..... .+|. ..++......   +.+... .....-|.-+|.+++
T Consensus       155 ~~tL~v~~tw~T~~~k~~~~naFm-vCGvLY~~~s~~~~~~~I~yafDt~t~~~~~~~i~f~~~-~~~~~~l~YNP~dk~  232 (250)
T PF02191_consen  155 PETLSVEQTWNTSYPKRSAGNAFM-VCGVLYATDSYDTRDTEIFYAFDTYTGKEEDVSIPFPNP-YGNISMLSYNPRDKK  232 (250)
T ss_pred             cccCceEEEEEeccCchhhcceee-EeeEEEEEEECCCCCcEEEEEEECCCCceeceeeeeccc-cCceEeeeECCCCCe
Confidence             44455555554444442 22222 26999999875332 4443 5665533222   222222 455678888999999


Q ss_pred             EEEEECCC
Q psy5751         147 LCWVDADS  154 (232)
Q Consensus       147 Ly~~d~~~  154 (232)
                      ||.=|.+.
T Consensus       233 LY~wd~G~  240 (250)
T PF02191_consen  233 LYAWDNGY  240 (250)
T ss_pred             EEEEECCe
Confidence            99888544

Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding

>KOG0293|consensus

Probab=94.21  E-value=2.8  Score=34.93  Aligned_cols=151  Identities=11%  Similarity=0.014  Sum_probs=94.5

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+.|.|.+..|. +--.++ .+...+.+.+........+ -..+.+.+--+.+.. +++....+.|..+++||.....=-
T Consensus       274 yi~wSPDdryLl-aCg~~e-~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~-~V~Gs~dr~i~~wdlDgn~~~~W~  350 (519)
T KOG0293|consen  274 YIMWSPDDRYLL-ACGFDE-VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFR-FVTGSPDRTIIMWDLDGNILGNWE  350 (519)
T ss_pred             EEEECCCCCeEE-ecCchH-heeeccCCcchhhhhcccCcCCCcceeEEccCCce-eEecCCCCcEEEecCCcchhhccc
Confidence            566777444443 333334 4666666654433333332 246677777775544 667777789999999997632221


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      ........++|+.+.+..++.....   .+|..++.+......+.+.  -+....++++.+ +++..++.....|...++
T Consensus       351 gvr~~~v~dlait~Dgk~vl~v~~d---~~i~l~~~e~~~dr~lise--~~~its~~iS~d-~k~~LvnL~~qei~LWDl  424 (519)
T KOG0293|consen  351 GVRDPKVHDLAITYDGKYVLLVTVD---KKIRLYNREARVDRGLISE--EQPITSFSISKD-GKLALVNLQDQEIHLWDL  424 (519)
T ss_pred             ccccceeEEEEEcCCCcEEEEEecc---cceeeechhhhhhhccccc--cCceeEEEEcCC-CcEEEEEcccCeeEEeec
Confidence            1223456799999888888887754   3577666665544434433  345578889887 777778777777777777


Q ss_pred             C
Q psy5751         163 R  163 (232)
Q Consensus       163 ~  163 (232)
                      .
T Consensus       425 ~  425 (519)
T KOG0293|consen  425 E  425 (519)
T ss_pred             c
Confidence            5

>KOG0289|consensus

Probab=94.21  E-value=2.9  Score=35.04  Aligned_cols=163  Identities=12%  Similarity=0.074  Sum_probs=93.6

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      ....++...+.+.-+.|++... .+-..++.....-..+.  .+.-.-...+++| +|.||.+...  .+.+...++...
T Consensus       304 ~~V~~ls~h~tgeYllsAs~d~-~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~--d~~vkiwdlks~  379 (506)
T KOG0289|consen  304 EPVTGLSLHPTGEYLLSASNDG-TWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTP--DGVVKIWDLKSQ  379 (506)
T ss_pred             ccceeeeeccCCcEEEEecCCc-eEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCC--CceEEEEEcCCc
Confidence            3557888888777777777654 34444444433333332  2333456788998 8999988754  456777777655


Q ss_pred             CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc-eEEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEE
Q psy5751         122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV-RRKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIE  198 (232)
Q Consensus       122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~-~~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~  198 (232)
                      ....-+.. +-.....|+|... |+-..+....+.|...|++..+ .+++ .........+.+| .|.....-...=.|+
T Consensus       380 ~~~a~Fpg-ht~~vk~i~FsEN-GY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy  457 (506)
T KOG0289|consen  380 TNVAKFPG-HTGPVKAISFSEN-GYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVY  457 (506)
T ss_pred             cccccCCC-CCCceeEEEeccC-ceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEE
Confidence            42211111 1233457788763 5544555566779999988542 3333 2333345566776 444333334445667


Q ss_pred             EEeCCCCCcceEEe
Q psy5751         199 SANKEGERAPSIAL  212 (232)
Q Consensus       199 ~~~~~g~~~~~i~~  212 (232)
                      .+.+...+++.+..
T Consensus       458 ~~~k~~k~W~~~~~  471 (506)
T KOG0289|consen  458 ICKKKTKSWTEIKE  471 (506)
T ss_pred             EEecccccceeeeh
Confidence            77766666665544

>KOG0263|consensus

Probab=94.09  E-value=4.1  Score=36.39  Aligned_cols=150  Identities=11%  Similarity=0.070  Sum_probs=94.3

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEE-EEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKR-AHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~-~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      +.|.+ . ..|++...+. +..+ ...+-.....++...+.....+.++|. .+.-.+.+....+...|.......-++.
T Consensus       499 V~F~P-~-GyYFatas~D-~tArLWs~d~~~PlRifaghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~  574 (707)
T KOG0263|consen  499 VQFAP-R-GYYFATASHD-QTARLWSTDHNKPLRIFAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFT  574 (707)
T ss_pred             EEecC-C-ceEEEecCCC-ceeeeeecccCCchhhhcccccccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEec
Confidence            44554 3 4455554544 3332 333334444566667788889999994 4333455566778888877777766777


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      .+-.....++++| .|+-..+..  ..+.|...++.+......+... -..-..|+|+.+ +.+.++....+.|...|+.
T Consensus       575 GH~~~V~al~~Sp-~Gr~LaSg~--ed~~I~iWDl~~~~~v~~l~~H-t~ti~SlsFS~d-g~vLasgg~DnsV~lWD~~  649 (707)
T KOG0263|consen  575 GHKGPVTALAFSP-CGRYLASGD--EDGLIKIWDLANGSLVKQLKGH-TGTIYSLSFSRD-GNVLASGGADNSVRLWDLT  649 (707)
T ss_pred             CCCCceEEEEEcC-CCceEeecc--cCCcEEEEEcCCCcchhhhhcc-cCceeEEEEecC-CCEEEecCCCCeEEEEEch
Confidence            6766778999998 443333322  3567888888775433332222 445678999988 5666777777777776665

>KOG0268|consensus

Probab=93.91  E-value=3  Score=34.16  Aligned_cols=205  Identities=12%  Similarity=0.109  Sum_probs=106.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .||.++. +..+++.|..   .|.....+|....+++..  ....||.-.+ .+.+|.|...  .|...|..-..+..-+
T Consensus       113 ~Gi~v~~-~~~~tvgdDK---tvK~wk~~~~p~~tilg~--s~~~gIdh~~-~~~~FaTcGe--~i~IWD~~R~~Pv~sm  183 (433)
T KOG0268|consen  113 RGICVTQ-TSFFTVGDDK---TVKQWKIDGPPLHTILGK--SVYLGIDHHR-KNSVFATCGE--QIDIWDEQRDNPVSSM  183 (433)
T ss_pred             eeEEecc-cceEEecCCc---ceeeeeccCCcceeeecc--cccccccccc-ccccccccCc--eeeecccccCCcccee
Confidence            3666665 5555555544   455555555433334332  3445555555 4456655433  3444444333333333


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +-.......+-..|..-.|..+-.  ....|..+++.-..  ..+++..    .+|+|+..| +...|++-.....++..
T Consensus       184 swG~Dti~svkfNpvETsILas~~--sDrsIvLyD~R~~~Pl~KVi~~m----RTN~IswnP-eafnF~~a~ED~nlY~~  256 (433)
T KOG0268|consen  184 SWGADSISSVKFNPVETSILASCA--SDRSIVLYDLRQASPLKKVILTM----RTNTICWNP-EAFNFVAANEDHNLYTY  256 (433)
T ss_pred             ecCCCceeEEecCCCcchheeeec--cCCceEEEecccCCccceeeeec----cccceecCc-cccceeeccccccceeh
Confidence            223333344445544333333221  12335555553322  2333333    689999999 78999998888899999


Q ss_pred             ecCCCceEEEe--cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEE
Q psy5751         161 TIRNRVRRKVY--SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIA  224 (232)
Q Consensus       161 ~~~g~~~~~~~--~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~  224 (232)
                      |+.-..+..-+  ........+++- -|.=+++-+....|..+....+.-+.+++ ....+..++|.
T Consensus       257 DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYh-tkRMq~V~~Vk  322 (433)
T KOG0268|consen  257 DMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH-TKRMQHVFCVK  322 (433)
T ss_pred             hhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhh-HhhhheeeEEE
Confidence            88865443221  123333444542 45667777777777777776444343433 22244445544

>smart00284 OLF Olfactomedin-like domains

Probab=93.78  E-value=2.6  Score=33.04  Aligned_cols=140  Identities=14%  Similarity=0.108  Sum_probs=78.1

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCC-----------CCCccEEEEeecCC-eEEEEeCCCCeEEEEeCC--
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVE--DVITTN-----------IRSPEGLTFDWVNR-VLYWTDSQMDTISMANLN--   74 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~-----------~~~p~gl~~d~~~~-~ly~~d~~~~~I~~~~~~--   74 (232)
                      ++.||+.-.... .|.|+++......  ..+...           -..--.+|+|+.+= .||-+....+.|.+..++  
T Consensus        83 ngslYY~~~~s~-~iiKydL~t~~v~~~~~Lp~a~y~~~~~Y~~~~~sdiDlAvDE~GLWvIYat~~~~g~ivvSkLnp~  161 (255)
T smart00284       83 NGSLYFNKFNSH-DICRFDLTTETYQKEPLLNGAGYNNRFPYAWGGFSDIDLAVDENGLWVIYATEQNAGKIVISKLNPA  161 (255)
T ss_pred             CceEEEEecCCc-cEEEEECCCCcEEEEEecCccccccccccccCCCccEEEEEcCCceEEEEeccCCCCCEEEEeeCcc
Confidence            578998776766 8999999976542  222210           11225688886221 233334555667755544  


Q ss_pred             CCCCEEEEeCCCCCce-EEEEeCCCCeEEEEEcC-CCCCcEE-EEeCCCCCcEEE---EEcCCCCCcceEEEeCCCCEEE
Q psy5751          75 DDQPKVIVSKDLVNPR-GIVVHPYYRKLFWSDWN-RSGPKIE-WSNLDGTDREIF---LKAADLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~-~iavd~~~~~ly~~d~~-~~~~~I~-~~~~~g~~~~~~---~~~~~~~~p~~l~~d~~~~~Ly  148 (232)
                      ...++.........+. +-|+- ..|.||.++.. ....+|. ..+..+.....+   +... ......|.-.|.++.||
T Consensus       162 tL~ve~tW~T~~~k~sa~naFm-vCGvLY~~~s~~~~~~~I~yayDt~t~~~~~~~i~f~n~-y~~~s~l~YNP~d~~LY  239 (255)
T smart00284      162 TLTIENTWITTYNKRSASNAFM-ICGILYVTRSLGSKGEKVFYAYDTNTGKEGHLDIPFENM-YEYISMLDYNPNDRKLY  239 (255)
T ss_pred             cceEEEEEEcCCCcccccccEE-EeeEEEEEccCCCCCcEEEEEEECCCCccceeeeeeccc-cccceeceeCCCCCeEE
Confidence            4445555554443332 22222 25999999862 2344564 566654432211   1111 33345588888889999


Q ss_pred             EEECC
Q psy5751         149 WVDAD  153 (232)
Q Consensus       149 ~~d~~  153 (232)
                      .=|.+
T Consensus       240 ~wdng  244 (255)
T smart00284      240 AWNNG  244 (255)
T ss_pred             EEeCC
Confidence            87743

>KOG0292|consensus

Probab=93.75  E-value=5.6  Score=36.68  Aligned_cols=161  Identities=14%  Similarity=0.119  Sum_probs=94.3

Q ss_pred             EEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           6 TVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         6 ~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      +|++ +--|+++-..+. -+++|+.-.. ..+.-. ....+...++-+++ .+.|..+....+.|.+.|++.......+.
T Consensus       213 Afhp-TlpliVSG~DDRqVKlWrmnetK-aWEvDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~kRt~v~tfr  289 (1202)
T KOG0292|consen  213 AFHP-TLPLIVSGADDRQVKLWRMNETK-AWEVDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMTKRTSVQTFR  289 (1202)
T ss_pred             EecC-CcceEEecCCcceeeEEEecccc-ceeehhhhcccCCcceEEecC-ccceeEecCCCccEEEEecccccceeeee
Confidence            4444 445666544444 1344444332 222212 23467889999998 67788899999999999999877666665


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      ....+-+-+|.+| ...||-+.-..+   +++..++.             .+-..+++-  +.||+..  ...|...++.
T Consensus       290 rendRFW~laahP-~lNLfAAgHDsG---m~VFkleR-------------Erpa~~v~~--n~LfYvk--d~~i~~~d~~  348 (1202)
T KOG0292|consen  290 RENDRFWILAAHP-ELNLFAAGHDSG---MIVFKLER-------------ERPAYAVNG--NGLFYVK--DRFIRSYDLR  348 (1202)
T ss_pred             ccCCeEEEEEecC-CcceeeeecCCc---eEEEEEcc-------------cCceEEEcC--CEEEEEc--cceEEeeecc
Confidence            4556778888888 777877754321   33333321             233344443  4566665  5567777777


Q ss_pred             CCceEEEec--CC----CceEEEEE--ECCEEEEE
Q psy5751         164 NRVRRKVYS--NC----TYPFGLSI--TDEKYYWT  190 (232)
Q Consensus       164 g~~~~~~~~--~~----~~p~gla~--~~~~ly~t  190 (232)
                      ..+-..+.+  ..    ..|.++.+  .++.+.++
T Consensus       349 t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlic  383 (1202)
T KOG0292|consen  349 TQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLIC  383 (1202)
T ss_pred             ccccceeEeccCCCcccCCcceeeeccccCeEEEE
Confidence            644333322  22    23456666  35655555

>KOG2055|consensus

Probab=93.64  E-value=3.9  Score=34.55  Aligned_cols=189  Identities=9%  Similarity=0.059  Sum_probs=103.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE---EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV---ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~---~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .++.|++....|.++..+.  .+..+.++|..-..+   .... ..+...++.+.+....++.....-.+.+|+......
T Consensus       217 ~sv~FHp~~plllvaG~d~--~lrifqvDGk~N~~lqS~~l~~-fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~  293 (514)
T KOG2055|consen  217 TSVQFHPTAPLLLVAGLDG--TLRIFQVDGKVNPKLQSIHLEK-FPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVT  293 (514)
T ss_pred             eEEEecCCCceEEEecCCC--cEEEEEecCccChhheeeeecc-CccceeeecCCCceEEEecccceEEEEeeccccccc
Confidence            4789999777777777654  466777777543222   2222 244556676666634445555567788888665433


Q ss_pred             EEEe-CCCC--CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          80 VIVS-KDLV--NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        80 ~~~~-~~~~--~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      .+.. ....  ....+.|.+...  |.+-.+ ..+.|.....-... +..+-.   -....+++++.++.+||.+ .+.+
T Consensus       294 k~~~~~g~e~~~~e~FeVShd~~--fia~~G-~~G~I~lLhakT~eli~s~Ki---eG~v~~~~fsSdsk~l~~~-~~~G  366 (514)
T KOG2055|consen  294 KLKPPYGVEEKSMERFEVSHDSN--FIAIAG-NNGHIHLLHAKTKELITSFKI---EGVVSDFTFSSDSKELLAS-GGTG  366 (514)
T ss_pred             cccCCCCcccchhheeEecCCCC--eEEEcc-cCceEEeehhhhhhhhheeee---ccEEeeEEEecCCcEEEEE-cCCc
Confidence            3322 1111  224566777555  333333 25667665543332 222222   2356789999886666544 6678


Q ss_pred             cEEEEecCCCce-EEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751         156 SLECMTIRNRVR-RKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       156 ~i~~~~~~g~~~-~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~  201 (232)
                      .|+..+++-... +.+ .++.-+-..++.. ++.++=+-+.++-|-..+
T Consensus       367 eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd  415 (514)
T KOG2055|consen  367 EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYD  415 (514)
T ss_pred             eEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEec
Confidence            999999986533 222 2333344444542 444344445556555554

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=93.45  E-value=2.6  Score=31.97  Aligned_cols=114  Identities=18%  Similarity=0.114  Sum_probs=66.6

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--EEEEeCCCCCceEE--EEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--KVIVSKDLVNPRGI--VVHPYYRKLFWSDWNRSGPKIEWSNLD  119 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~i--avd~~~~~ly~~d~~~~~~~I~~~~~~  119 (232)
                      ..-+|++.|.  .+|.-+| ++..++..|+.....  .+.+. ....|.+.  .+-...|.||-.-|.  ..+|.|++.+
T Consensus       131 GeGWgLt~d~--~~Limsd-GsatL~frdP~tfa~~~~v~VT-~~g~pv~~LNELE~VdG~lyANVw~--t~~I~rI~p~  204 (262)
T COG3823         131 GEGWGLTSDD--KNLIMSD-GSATLQFRDPKTFAELDTVQVT-DDGVPVSKLNELEWVDGELYANVWQ--TTRIARIDPD  204 (262)
T ss_pred             CcceeeecCC--cceEeeC-CceEEEecCHHHhhhcceEEEE-ECCeecccccceeeeccEEEEeeee--ecceEEEcCC
Confidence            3567888884  4565444 445666666655331  11111 11222211  133347888877775  3468888888


Q ss_pred             CCCcEEEEEcC-----------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751         120 GTDREIFLKAA-----------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus       120 g~~~~~~~~~~-----------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      ...+.....-.           ...-+||||.++..+++|.+--.-..+..+.++
T Consensus       205 sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK~wp~lfEVk~~  259 (262)
T COG3823         205 SGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGKLWPLLFEVKLD  259 (262)
T ss_pred             CCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecCcCceeEEEEec
Confidence            76554433211           134689999999999999985555555555544

>KOG1274|consensus

Probab=93.44  E-value=6.2  Score=36.22  Aligned_cols=152  Identities=13%  Similarity=0.101  Sum_probs=91.8

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+.|++..+.|+.++....  |.++..... ...+.+...-....+++.+.   +.|.+....+.|.++..+......++
T Consensus        18 ~i~~d~~gefi~tcgsdg~--ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s---~~f~~~s~~~tv~~y~fps~~~~~iL   92 (933)
T KOG1274|consen   18 LICYDPDGEFICTCGSDGD--IRKWKTNSDEEEPETIDISGELVSSIACYS---NHFLTGSEQNTVLRYKFPSGEEDTIL   92 (933)
T ss_pred             EEEEcCCCCEEEEecCCCc--eEEeecCCcccCCchhhccCceeEEEeecc---cceEEeeccceEEEeeCCCCCcccee
Confidence            6789998887777765543  665555433 21122221113445566653   36667777889999998877766555


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      ..-.-..+.++++- +|.+-.+...  .--|...+++....+..+... -....+|.+|+.+..|-+ -..+|.|...++
T Consensus        93 ~Rftlp~r~~~v~g-~g~~iaagsd--D~~vK~~~~~D~s~~~~lrgh-~apVl~l~~~p~~~fLAv-ss~dG~v~iw~~  167 (933)
T KOG1274|consen   93 ARFTLPIRDLAVSG-SGKMIAAGSD--DTAVKLLNLDDSSQEKVLRGH-DAPVLQLSYDPKGNFLAV-SSCDGKVQIWDL  167 (933)
T ss_pred             eeeeccceEEEEec-CCcEEEeecC--ceeEEEEeccccchheeeccc-CCceeeeeEcCCCCEEEE-EecCceEEEEEc
Confidence            42222346788885 4544444332  345777777666555555442 234468999997555544 466888888888


Q ss_pred             CCC
Q psy5751         163 RNR  165 (232)
Q Consensus       163 ~g~  165 (232)
                      +..
T Consensus       168 ~~~  170 (933)
T KOG1274|consen  168 QDG  170 (933)
T ss_pred             ccc
Confidence            744

>KOG0263|consensus

Probab=93.17  E-value=6.1  Score=35.39  Aligned_cols=189  Identities=13%  Similarity=0.117  Sum_probs=106.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCC---eEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMD---TISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~---~I~~~~~~g~~~~   79 (232)
                      .+..|.+. +++.++...+. .++-..++...--.+........+.+.+.+  .-.||+.....   +++.++  -..+.
T Consensus       455 yg~sFsPd-~rfLlScSED~-svRLWsl~t~s~~V~y~GH~~PVwdV~F~P--~GyYFatas~D~tArLWs~d--~~~Pl  528 (707)
T KOG0263|consen  455 YGCSFSPD-RRFLLSCSEDS-SVRLWSLDTWSCLVIYKGHLAPVWDVQFAP--RGYYFATASHDQTARLWSTD--HNKPL  528 (707)
T ss_pred             eeeeeccc-ccceeeccCCc-ceeeeecccceeEEEecCCCcceeeEEecC--CceEEEecCCCceeeeeecc--cCCch
Confidence            46677773 34334443434 555555554332233344444556677776  34777765533   344444  34454


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      -++..++++..-+.++|...  |.+... ....+...+.-.....-++... -.....|++++.+..| .+-...+.|..
T Consensus       529 RifaghlsDV~cv~FHPNs~--Y~aTGS-sD~tVRlWDv~~G~~VRiF~GH-~~~V~al~~Sp~Gr~L-aSg~ed~~I~i  603 (707)
T KOG0263|consen  529 RIFAGHLSDVDCVSFHPNSN--YVATGS-SDRTVRLWDVSTGNSVRIFTGH-KGPVTALAFSPCGRYL-ASGDEDGLIKI  603 (707)
T ss_pred             hhhcccccccceEEECCccc--ccccCC-CCceEEEEEcCCCcEEEEecCC-CCceEEEEEcCCCceE-eecccCCcEEE
Confidence            45555888888899998544  333322 1233444444433333344432 4556799999975554 33344678888


Q ss_pred             EecCCCce-EEEecCCCceEEEEE-ECCEEEEEeCCCCcEEEEeC
Q psy5751         160 MTIRNRVR-RKVYSNCTYPFGLSI-TDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       160 ~~~~g~~~-~~~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~~~  202 (232)
                      .|+.++.. ..+...-....+|.+ .+|.+.++....+.|..-+.
T Consensus       604 WDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~  648 (707)
T KOG0263|consen  604 WDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDL  648 (707)
T ss_pred             EEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEc
Confidence            88887544 333334555667777 46777777777776655543

>PRK13616 lipoprotein LpqB; Provisional

Probab=93.13  E-value=6  Score=35.24  Aligned_cols=156  Identities=6%  Similarity=-0.053  Sum_probs=94.5

Q ss_pred             CCccEEEEeecCCeEEEEeC-------CCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcC--------
Q psy5751          44 RSPEGLTFDWVNRVLYWTDS-------QMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWN--------  107 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~-------~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~--------  107 (232)
                      ..+...++.+.++.+.++..       ...+|++.+.++.. +.+.. ..+.   .-..+|..+.|++...+        
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g~~~t---~PsWspDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEGHSLT---RPSWSLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-eeeecCCCCC---CceECCCCCceEEEecCcceEEEec
Confidence            46677888887877776652       23578888876655 33333 2233   34566655666555311        


Q ss_pred             -CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE---EecCCCceEE-----EecCCCc-e
Q psy5751         108 -RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC---MTIRNRVRRK-----VYSNCTY-P  177 (232)
Q Consensus       108 -~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~---~~~~g~~~~~-----~~~~~~~-p  177 (232)
                       ...++++...+++.....  ..  -..+..+.+++++.+|.+.-.  ++|+.   ...+++..+.     +...+.. +
T Consensus       426 ~~~~gql~~~~vd~ge~~~--~~--~g~Issl~wSpDG~RiA~i~~--g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~  499 (591)
T PRK13616        426 DPATGQLARTPVDASAVAS--RV--PGPISELQLSRDGVRAAMIIG--GKVYLAVVEQTEDGQYALTNPREVGPGLGDTA  499 (591)
T ss_pred             cCCCceEEEEeccCchhhh--cc--CCCcCeEEECCCCCEEEEEEC--CEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence             123456666666554333  11  235889999999999988763  56766   4544544333     3334444 5


Q ss_pred             EEEEEE-CCEEEEEeC-CCCcEEEEeCCCCCcce
Q psy5751         178 FGLSIT-DEKYYWTDW-KTNRIESANKEGERAPS  209 (232)
Q Consensus       178 ~gla~~-~~~ly~td~-~~~~i~~~~~~g~~~~~  209 (232)
                      ..+++. ++.|++... ....+++++.+|...+.
T Consensus       500 ~~l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~  533 (591)
T PRK13616        500 VSLDWRTGDSLVVGRSDPEHPVWYVNLDGSNSDA  533 (591)
T ss_pred             ccceEecCCEEEEEecCCCCceEEEecCCccccc
Confidence            777874 667776633 33569999999887653

>KOG0286|consensus

Probab=93.07  E-value=3.7  Score=32.67  Aligned_cols=155  Identities=7%  Similarity=-0.001  Sum_probs=98.2

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW  103 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~  103 (232)
                      .....+++.......+.......-+|++.+.+.+.|++..-.......|+....++..+..+-.+.+.+.+.| +|.-|.
T Consensus       167 TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP-~G~afa  245 (343)
T KOG0286|consen  167 TCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFP-SGDAFA  245 (343)
T ss_pred             eEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEcc-CCCeee
Confidence            4555566644433444444567788888887888999887777888888877777777777788999999998 888888


Q ss_pred             EEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEec-CCCceEEEecCCCceEEEE
Q psy5751         104 SDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTI-RNRVRRKVYSNCTYPFGLS  181 (232)
Q Consensus       104 ~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~-~g~~~~~~~~~~~~p~gla  181 (232)
                      +-..  .+....+++.......+.+. ......+.++|+.. |+|.++-.....+...|. .+....++...-+....|.
T Consensus       246 tGSD--D~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S-GRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~  322 (343)
T KOG0286|consen  246 TGSD--DATCRLYDLRADQELAVYSHDSIICGITSVAFSKS-GRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLG  322 (343)
T ss_pred             ecCC--CceeEEEeecCCcEEeeeccCcccCCceeEEEccc-ccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEE
Confidence            8654  45566666654433333332 22556689999987 666666444444444433 3333333433333333333


Q ss_pred             E
Q psy5751         182 I  182 (232)
Q Consensus       182 ~  182 (232)
                      +
T Consensus       323 ~  323 (343)
T KOG0286|consen  323 V  323 (343)
T ss_pred             E
Confidence            3

>KOG4328|consensus

Probab=93.07  E-value=4.8  Score=33.95  Aligned_cols=194  Identities=13%  Similarity=0.070  Sum_probs=99.0

Q ss_pred             EEEEEeCCCC-EEEEEEcCCCCcEEEEEcCCC--ceeEE--EeCCCCCccEEEEeecCC-eEEEEeCCCCeEEEEeCCCC
Q psy5751           3 IGITVDCVEG-QVYYSSVADKSSIKRAHLDGK--NVEDV--ITTNIRSPEGLTFDWVNR-VLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         3 ~~i~~d~~~~-~ly~~d~~~~~~i~~~~~~g~--~~~~~--~~~~~~~p~gl~~d~~~~-~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .+++|++..+ .|..+-...+ .|...++.+.  ....+  ....-....+|.+-+.+- .+| +.+..|.|...|+.+.
T Consensus       190 t~l~fHPt~~~~lva~GdK~G-~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~-ssSyDGtiR~~D~~~~  267 (498)
T KOG4328|consen  190 TSLAFHPTENRKLVAVGDKGG-QVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIY-SSSYDGTIRLQDFEGN  267 (498)
T ss_pred             EEEEecccCcceEEEEccCCC-cEEEEecCCCCCccCceEEeccCCccccceEecCCChhhee-eeccCceeeeeeecch
Confidence            5788999777 5555544444 7888888632  22122  222223345555554332 333 3334456666666665


Q ss_pred             CCEEEEeC--CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          77 QPKVIVSK--DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        77 ~~~~~~~~--~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      ..+.+.+.  ....-.++-+...++.+++.+.-. .-.+.-.+.++.....+...  -....++++.|-..+++-+-+..
T Consensus       268 i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-~f~~iD~R~~~s~~~~~~lh--~kKI~sv~~NP~~p~~laT~s~D  344 (498)
T KOG4328|consen  268 ISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-NFNVIDLRTDGSEYENLRLH--KKKITSVALNPVCPWFLATASLD  344 (498)
T ss_pred             hhHHHhhcCccceeeeeccccCCCccEEEeeccc-ceEEEEeecCCccchhhhhh--hcccceeecCCCCchheeecccC
Confidence            54444442  112223333444455555554321 22344444555544443333  23678899999877766665544


Q ss_pred             C--cEEEEecCCCceEEEecCCCceE--EEEEE---CCEEEEEeCCCCcEEEEeC
Q psy5751         155 K--SLECMTIRNRVRRKVYSNCTYPF--GLSIT---DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       155 ~--~i~~~~~~g~~~~~~~~~~~~p~--gla~~---~~~ly~td~~~~~i~~~~~  202 (232)
                      +  +||-++-=+.+..-+++.+.+-.  .-|.+   .+. .+|....++|..++-
T Consensus       345 ~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~D~~IRv~ds  398 (498)
T KOG4328|consen  345 QTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQDNEIRVFDS  398 (498)
T ss_pred             cceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeeccCCceEEeec
Confidence            4  44443222333322455444433  33443   566 555555677777765

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=92.98  E-value=4.8  Score=33.71  Aligned_cols=135  Identities=17%  Similarity=0.146  Sum_probs=69.9

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC-CC--C
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK-DL--V   87 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~--~   87 (232)
                      ++.||+++.. + .++.++......  +-......+..++++  ++.||+.+. .+.++.++......  +... ..  .
T Consensus       256 ~~~vy~~~~~-g-~l~ald~~tG~~--~W~~~~~~~~~~~~~--~~~vy~~~~-~g~l~ald~~tG~~--~W~~~~~~~~  326 (394)
T PRK11138        256 GGVVYALAYN-G-NLVALDLRSGQI--VWKREYGSVNDFAVD--GGRIYLVDQ-NDRVYALDTRGGVE--LWSQSDLLHR  326 (394)
T ss_pred             CCEEEEEEcC-C-eEEEEECCCCCE--EEeecCCCccCcEEE--CCEEEEEcC-CCeEEEEECCCCcE--EEcccccCCC
Confidence            4667776643 3 577777764331  222223334445555  678998774 47888888865432  2221 11  1


Q ss_pred             CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      ...+.++.  ++.||+.+.   .+.++.++.+.....--.............+.  +++||+.. ..+.++.+..
T Consensus       327 ~~~sp~v~--~g~l~v~~~---~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~--~~~l~v~t-~~G~l~~~~~  393 (394)
T PRK11138        327 LLTAPVLY--NGYLVVGDS---EGYLHWINREDGRFVAQQKVDSSGFLSEPVVA--DDKLLIQA-RDGTVYAITR  393 (394)
T ss_pred             cccCCEEE--CCEEEEEeC---CCEEEEEECCCCCEEEEEEcCCCcceeCCEEE--CCEEEEEe-CCceEEEEeC
Confidence            11233444  788988874   35677777654432211111000111112222  47898884 3667776653

>COG3211 PhoX Predicted phosphatase [General function prediction only]

Probab=92.96  E-value=2.1  Score=37.20  Aligned_cols=106  Identities=17%  Similarity=0.176  Sum_probs=65.4

Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCC--------------CCcEEEEeCCCC-------CcEEEEEcC---C--------
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRS--------------GPKIEWSNLDGT-------DREIFLKAA---D--------  131 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~--------------~~~I~~~~~~g~-------~~~~~~~~~---~--------  131 (232)
                      ..+.+|.++++.|..+.+|++..+..              -++|+|.-..+.       .-++++...   .        
T Consensus       414 T~mdRpE~i~~~p~~g~Vy~~lTNn~~r~~~~aNpr~~n~~G~I~r~~p~~~d~t~~~ftWdlF~~aG~~~~~~~~~~~~  493 (616)
T COG3211         414 TPMDRPEWIAVNPGTGEVYFTLTNNGKRSDDAANPRAKNGYGQIVRWIPATGDHTDTKFTWDLFVEAGNPSVLEGGASAN  493 (616)
T ss_pred             ccccCccceeecCCcceEEEEeCCCCccccccCCCcccccccceEEEecCCCCccCccceeeeeeecCCccccccccccC
Confidence            36889999999999999999865422              257777665443       112222211   1        


Q ss_pred             -----CCCcceEEEeCCCCEEEEEECCCC--------cEEEEecCCCceEEEecCCCceE-----EEEEE--CCEEEEE
Q psy5751         132 -----LKLPNSLAVDFRTDELCWVDADSK--------SLECMTIRNRVRRKVYSNCTYPF-----GLSIT--DEKYYWT  190 (232)
Q Consensus       132 -----~~~p~~l~~d~~~~~Ly~~d~~~~--------~i~~~~~~g~~~~~~~~~~~~p~-----gla~~--~~~ly~t  190 (232)
                           +..|.+|+||+. ++|+++.-+..        -+..+...+.++-++...+..|.     |.++.  ...+|+.
T Consensus       494 ~~~~~f~~PDnl~fD~~-GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~  571 (616)
T COG3211         494 INANWFNSPDNLAFDPW-GRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVN  571 (616)
T ss_pred             cccccccCCCceEECCC-CCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEE
Confidence                 345999999998 88887744321        34455555555555655555555     44552  3466665

>KOG1539|consensus

Probab=92.58  E-value=7.1  Score=35.55  Aligned_cols=142  Identities=18%  Similarity=0.103  Sum_probs=82.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..|++.|. .+++.++-..++ -+.-.++.+......+.-+ ..+.++...-.. -++.+-...-.|.++|.......-.
T Consensus       496 V~gla~D~-~n~~~vsa~~~G-ilkfw~f~~k~l~~~l~l~-~~~~~iv~hr~s-~l~a~~~ddf~I~vvD~~t~kvvR~  571 (910)
T KOG1539|consen  496 VTGLAVDG-TNRLLVSAGADG-ILKFWDFKKKVLKKSLRLG-SSITGIVYHRVS-DLLAIALDDFSIRVVDVVTRKVVRE  571 (910)
T ss_pred             eeEEEecC-CCceEEEccCcc-eEEEEecCCcceeeeeccC-CCcceeeeeehh-hhhhhhcCceeEEEEEchhhhhhHH
Confidence            35778886 555555555545 4555566654422222111 234444444333 3444444455788888766554333


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      +....++..+++++|.+++|..+...   ..|...++-.... ..+.-.   ..+..+.++|.++.|-.+...
T Consensus       572 f~gh~nritd~~FS~DgrWlisasmD---~tIr~wDlpt~~lID~~~vd---~~~~sls~SPngD~LAT~Hvd  638 (910)
T KOG1539|consen  572 FWGHGNRITDMTFSPDGRWLISASMD---STIRTWDLPTGTLIDGLLVD---SPCTSLSFSPNGDFLATVHVD  638 (910)
T ss_pred             hhccccceeeeEeCCCCcEEEEeecC---CcEEEEeccCcceeeeEecC---CcceeeEECCCCCEEEEEEec
Confidence            44577889999999988988888765   3588888654432 222221   245678888876666555443

>KOG0294|consensus

Probab=92.55  E-value=4.7  Score=32.47  Aligned_cols=201  Identities=11%  Similarity=0.043  Sum_probs=103.8

Q ss_pred             EEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCC--eEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceE
Q psy5751          14 VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNR--VLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRG   91 (232)
Q Consensus        14 ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~--~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~   91 (232)
                      -|++.....-+|..+++.....--.+...-..+..+.++....  .|. +-..++.|...+.+.=...--+..+-.+..+
T Consensus        54 ~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLl-S~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~  132 (362)
T KOG0294|consen   54 PYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLL-SGSDDGHIIIWRVGSWELLKSLKAHKGQVTD  132 (362)
T ss_pred             eeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhhee-eecCCCcEEEEEcCCeEEeeeecccccccce
Confidence            4555433322788888886432222222345677777776442  343 5566678887776543222222234556899


Q ss_pred             EEEeCCCCeEEEEEcCCCCCcEEEEeC-CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751          92 IVVHPYYRKLFWSDWNRSGPKIEWSNL-DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus        92 iavd~~~~~ly~~d~~~~~~~I~~~~~-~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~  170 (232)
                      ++++| .+.|-.+-.+  ...+...++ .|...-++-.   -+.+.-+.+++.+.+.++.-  .++|....++....-..
T Consensus       133 lsiHP-S~KLALsVg~--D~~lr~WNLV~Gr~a~v~~L---~~~at~v~w~~~Gd~F~v~~--~~~i~i~q~d~A~v~~~  204 (362)
T KOG0294|consen  133 LSIHP-SGKLALSVGG--DQVLRTWNLVRGRVAFVLNL---KNKATLVSWSPQGDHFVVSG--RNKIDIYQLDNASVFRE  204 (362)
T ss_pred             eEecC-CCceEEEEcC--CceeeeehhhcCccceeecc---CCcceeeEEcCCCCEEEEEe--ccEEEEEecccHhHhhh
Confidence            99999 6777666544  345666665 3443333322   34566688888766555443  44555555554332222


Q ss_pred             ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEc
Q psy5751         171 YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       171 ~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      .+....+..+.+. ++.|.+. ..+..|...+-+ +.....+   ..+.++..+|+++.
T Consensus       205 i~~~~r~l~~~~l~~~~L~vG-~d~~~i~~~D~ds~~~~~~~---~AH~~RVK~i~~~~  259 (362)
T KOG0294|consen  205 IENPKRILCATFLDGSELLVG-GDNEWISLKDTDSDTPLTEF---LAHENRVKDIASYT  259 (362)
T ss_pred             hhccccceeeeecCCceEEEe-cCCceEEEeccCCCccceee---ecchhheeeeEEEe
Confidence            2233444555543 4444443 223344444444 2222222   24455556665544

>KOG2048|consensus

Probab=92.55  E-value=7.1  Score=34.57  Aligned_cols=154  Identities=10%  Similarity=0.034  Sum_probs=93.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .+.|....+.+|++..... .+..+.+++...+++...    ....+.-|++.+.++.|-.++ ..+.|+++++.+...+
T Consensus       433 ~i~ftid~~k~~~~s~~~~-~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~-t~g~I~v~nl~~~~~~  510 (691)
T KOG2048|consen  433 AISFTIDKNKLFLVSKNIF-SLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS-TRGQIFVYNLETLESH  510 (691)
T ss_pred             eeEEEecCceEEEEecccc-eeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe-ccceEEEEEcccceee
Confidence            3445555677777775555 788888887655444321    345667788888888887777 5588999999998766


Q ss_pred             EEEeCCCCCceEEEEe-CCCCeEEEEEcCCCCCcEEEEeCCCCCcE--------EEEEc--CCCCCcceEEEeCCCCEEE
Q psy5751          80 VIVSKDLVNPRGIVVH-PYYRKLFWSDWNRSGPKIEWSNLDGTDRE--------IFLKA--ADLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd-~~~~~ly~~d~~~~~~~I~~~~~~g~~~~--------~~~~~--~~~~~p~~l~~d~~~~~Ly  148 (232)
                      .+...-......+++. +..+.|-++..+   ++++..+++..+..        .+...  .......|+.+|+.+...+
T Consensus       511 ~l~~rln~~vTa~~~~~~~~~~lvvats~---nQv~efdi~~~~l~~ws~~nt~nlpk~~~~l~~~~~gisfd~~n~s~~  587 (691)
T KOG2048|consen  511 LLKVRLNIDVTAAAFSPFVRNRLVVATSN---NQVFEFDIEARNLTRWSKNNTRNLPKEPKTLIPGIPGISFDPKNSSRF  587 (691)
T ss_pred             cchhccCcceeeeeccccccCcEEEEecC---CeEEEEecchhhhhhhhhccccccccChhhcCCCCceEEeCCCCccEE
Confidence            5553111333455555 445677777653   45777776433211        11110  0134567999998877666


Q ss_pred             EEECCCCcEEEEecC
Q psy5751         149 WVDADSKSLECMTIR  163 (232)
Q Consensus       149 ~~d~~~~~i~~~~~~  163 (232)
                      |.- ..+-+..++.+
T Consensus       588 ~~~-~a~w~~~id~~  601 (691)
T KOG2048|consen  588 IVY-DAHWSCLIDFS  601 (691)
T ss_pred             EEE-cCcEEEEEecC
Confidence            663 23344455554

>KOG0272|consensus

Probab=92.49  E-value=5.6  Score=33.23  Aligned_cols=192  Identities=13%  Similarity=0.042  Sum_probs=106.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |++......++.++++-.-.+ .......+.-+...++........++.+.+.. +.-..+-...+.+...++++.....
T Consensus       177 Pis~~~fS~ds~~laT~swsG-~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~  255 (459)
T KOG0272|consen  177 PISGCSFSRDSKHLATGSWSG-LVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQ  255 (459)
T ss_pred             cceeeEeecCCCeEEEeecCC-ceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchh
Confidence            444444445566666654444 45555555444333444445678888888862 4333355556667777777654333


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~  158 (232)
                      -+..+..+...++++|.++.|--+-... .-++  .++.. ..+.+.....-....++++.++ |-|--+-..  .++||
T Consensus       256 ~l~gH~~RVs~VafHPsG~~L~TasfD~-tWRl--WD~~t-k~ElL~QEGHs~~v~~iaf~~D-GSL~~tGGlD~~~RvW  330 (459)
T KOG0272|consen  256 DLEGHLARVSRVAFHPSGKFLGTASFDS-TWRL--WDLET-KSELLLQEGHSKGVFSIAFQPD-GSLAATGGLDSLGRVW  330 (459)
T ss_pred             hhhcchhhheeeeecCCCceeeeccccc-chhh--ccccc-chhhHhhcccccccceeEecCC-CceeeccCccchhhee
Confidence            3335677888999999555544333321 2223  33332 2333333333556778999987 555444222  23444


Q ss_pred             EEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751         159 CMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       159 ~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~  201 (232)
                        |++.+....+++ .+....++++. +|+..-|-...+.+..-+
T Consensus       331 --DlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWD  373 (459)
T KOG0272|consen  331 --DLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWD  373 (459)
T ss_pred             --ecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEee
Confidence              466555555544 55666788885 777777766555433333

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=92.49  E-value=5.4  Score=33.07  Aligned_cols=134  Identities=10%  Similarity=-0.003  Sum_probs=72.9

Q ss_pred             CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCC
Q psy5751          55 NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKL  134 (232)
Q Consensus        55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~  134 (232)
                      ++.+|++.. .+.++.++.....  .+...........+++  ++++|+...   .++++.++.......--.....-..
T Consensus       241 ~~~vy~~~~-~g~l~a~d~~tG~--~~W~~~~~~~~~p~~~--~~~vyv~~~---~G~l~~~d~~tG~~~W~~~~~~~~~  312 (377)
T TIGR03300       241 GGQVYAVSY-QGRVAALDLRSGR--VLWKRDASSYQGPAVD--DNRLYVTDA---DGVVVALDRRSGSELWKNDELKYRQ  312 (377)
T ss_pred             CCEEEEEEc-CCEEEEEECCCCc--EEEeeccCCccCceEe--CCEEEEECC---CCeEEEEECCCCcEEEccccccCCc
Confidence            578887765 4678888875443  2232223334455666  789999873   4668888885443221111100011


Q ss_pred             cceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCC--ceEEEEEECCEEEEEeCCCCcEEEE
Q psy5751         135 PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCT--YPFGLSITDEKYYWTDWKTNRIESA  200 (232)
Q Consensus       135 p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~--~p~gla~~~~~ly~td~~~~~i~~~  200 (232)
                      .....+.  +++||+.+ ..+.+..++.+.++..--.+...  ....-++.+++||+... ++.|+.|
T Consensus       313 ~ssp~i~--g~~l~~~~-~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~-dG~l~~~  376 (377)
T TIGR03300       313 LTAPAVV--GGYLVVGD-FEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTR-DGDLYAF  376 (377)
T ss_pred             cccCEEE--CCEEEEEe-CCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeC-CceEEEe
Confidence            1122232  47888875 46788888887544322222111  11233466788998876 3556654

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG3621|consensus

Probab=92.35  E-value=1.9  Score=38.18  Aligned_cols=170  Identities=11%  Similarity=0.043  Sum_probs=93.7

Q ss_pred             ccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751          46 PEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR  123 (232)
Q Consensus        46 p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~  123 (232)
                      -..+++....+.|||-....+........|........  .....-  +|+-..+|++-|...          +......
T Consensus        45 ~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~l--vAagt~~g~V~v~ql----------~~~~p~~  112 (726)
T KOG3621|consen   45 EEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYL--VAAGTASGRVSVFQL----------NKELPRD  112 (726)
T ss_pred             CceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHh--hhhhcCCceEEeehh----------hccCCCc
Confidence            34466666678888888777776666665533221111  111111  122222344333321          1111111


Q ss_pred             EEEEEcCC---CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC-----ceEEEecCCCceEEEEEECCEEEEEeCCCC
Q psy5751         124 EIFLKAAD---LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR-----VRRKVYSNCTYPFGLSITDEKYYWTDWKTN  195 (232)
Q Consensus       124 ~~~~~~~~---~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~-----~~~~~~~~~~~p~gla~~~~~ly~td~~~~  195 (232)
                      ...+...+   -....+++.+++..++|..|. .|+|....++..     +.+.+........-|...+.+|.++.....
T Consensus       113 ~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~-~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVStl~r~  191 (726)
T KOG3621|consen  113 LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDS-QGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVSTLTRC  191 (726)
T ss_pred             ceeeccccccCCceEEEEEecccccEEeecCC-CceEEEEEechhhhhccccceeeccCcceEEeecccceehHhhhhhh
Confidence            22222110   224568889999899998876 677888888861     223333333333444556888888776544


Q ss_pred             cEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         196 RIESANKEGERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       196 ~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      -  .++-..+..+.|-.+.+....++|.-+++.+|
T Consensus       192 ~--Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~  224 (726)
T KOG3621|consen  192 I--LCQTEAETITQIGKKPRKSLIDFGACFFPGQC  224 (726)
T ss_pred             h--eeecchhHHHHhcCCCcCCccccceEEeeccc
Confidence            2  34444445555665555666789999999999

>KOG0277|consensus

Probab=92.28  E-value=4.5  Score=31.64  Aligned_cols=119  Identities=13%  Similarity=-0.016  Sum_probs=70.8

Q ss_pred             CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE
Q psy5751          45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE  124 (232)
Q Consensus        45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~  124 (232)
                      +..++......+..+.+.+-.+.|-..+.+-......+..+.......+.+|.-..||-+.++-...+|+-++..|....
T Consensus       106 EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~  185 (311)
T KOG0277|consen  106 EVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS  185 (311)
T ss_pred             heEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE
Confidence            44444444455677777777777777776665544444455556677778887788877766544556666555555444


Q ss_pred             EEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751         125 IFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV  166 (232)
Q Consensus       125 ~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~  166 (232)
                      +....   ...-..-....+..+.++-...+.|...|++.-+
T Consensus       186 i~ah~---~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r  224 (311)
T KOG0277|consen  186 IEAHN---SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR  224 (311)
T ss_pred             EEecc---ceeEeecccccCCcEEEecCCCceEEEEehhhcc
Confidence            22221   1222333445556777776667777777776543

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=92.24  E-value=4.1  Score=31.07  Aligned_cols=142  Identities=14%  Similarity=0.140  Sum_probs=72.5

Q ss_pred             CCEEEEEEcCCCCcEEEEEcC-CCceeEEEe-C--C--CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVIT-T--N--IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSK   84 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~-~--~--~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~   84 (232)
                      ++.+|+.. .++ +|+.++.. |....+... .  .  ...+...+++  ++.+|+... .+.|..+|+......--...
T Consensus        76 ~~~v~v~~-~~~-~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~g~l~~~d~~tG~~~w~~~~  150 (238)
T PF13360_consen   76 GGRVYVGT-SDG-SLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD--GDRLYVGTS-SGKLVALDPKTGKLLWKYPV  150 (238)
T ss_dssp             TTEEEEEE-TTS-EEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE--TTEEEEEET-CSEEEEEETTTTEEEEEEES
T ss_pred             cccccccc-cee-eeEecccCCcceeeeeccccccccccccccCceEe--cCEEEEEec-cCcEEEEecCCCcEEEEeec
Confidence            45666655 223 57777743 444333211 1  1  1223334444  566776664 46777777654432211111


Q ss_pred             CC---CC-------c-eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          85 DL---VN-------P-RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        85 ~~---~~-------p-~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ..   ..       . ..+.++  ++.+|++...   +.+..+++...... . ... ...+.++ ....++.||+++ .
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~---g~~~~~d~~tg~~~-w-~~~-~~~~~~~-~~~~~~~l~~~~-~  220 (238)
T PF13360_consen  151 GEPRGSSPISSFSDINGSPVIS--DGRVYVSSGD---GRVVAVDLATGEKL-W-SKP-ISGIYSL-PSVDGGTLYVTS-S  220 (238)
T ss_dssp             STT-SS--EEEETTEEEEEECC--TTEEEEECCT---SSEEEEETTTTEEE-E-EEC-SS-ECEC-EECCCTEEEEEE-T
T ss_pred             CCCCCCcceeeecccccceEEE--CCEEEEEcCC---CeEEEEECCCCCEE-E-Eec-CCCccCC-ceeeCCEEEEEe-C
Confidence            11   01       1 223333  5688887754   23555566655433 2 332 3344442 345568888888 6


Q ss_pred             CCcEEEEecCCCce
Q psy5751         154 SKSLECMTIRNRVR  167 (232)
Q Consensus       154 ~~~i~~~~~~g~~~  167 (232)
                      .++++++++..++.
T Consensus       221 ~~~l~~~d~~tG~~  234 (238)
T PF13360_consen  221 DGRLYALDLKTGKV  234 (238)
T ss_dssp             TTEEEEEETTTTEE
T ss_pred             CCEEEEEECCCCCE
Confidence            78899998887654

...

>KOG0303|consensus

Probab=92.24  E-value=5.9  Score=32.92  Aligned_cols=155  Identities=14%  Similarity=0.154  Sum_probs=89.5

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE--
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV--   82 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~--   82 (232)
                      ++|++.-..+..+...++ .|...+...... .+......-+.++.+.. ++.++++-.....|.++|........-.  
T Consensus       137 V~wHPtA~NVLlsag~Dn-~v~iWnv~tgea-li~l~hpd~i~S~sfn~-dGs~l~TtckDKkvRv~dpr~~~~v~e~~~  213 (472)
T KOG0303|consen  137 VQWHPTAPNVLLSAGSDN-TVSIWNVGTGEA-LITLDHPDMVYSMSFNR-DGSLLCTTCKDKKVRVIDPRRGTVVSEGVA  213 (472)
T ss_pred             EeecccchhhHhhccCCc-eEEEEeccCCce-eeecCCCCeEEEEEecc-CCceeeeecccceeEEEcCCCCcEeeeccc
Confidence            445554444444444555 666666664332 22222234567778877 5667788888889999987655432221  


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEE---eCCCCEEEEEECCCCcEE
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTDREIFLKAADLKLPNSLAV---DFRTDELCWVDADSKSLE  158 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~---d~~~~~Ly~~d~~~~~i~  158 (232)
                      .++...++.+.+.  ++.++-|...+ ...++-..+.+.-.....+..  +..-+|+-+   |++++.+|.+--+.+.|.
T Consensus       214 heG~k~~Raifl~--~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~e--lDtSnGvl~PFyD~dt~ivYl~GKGD~~IR  289 (472)
T KOG0303|consen  214 HEGAKPARAIFLA--SGKIFTTGFSRMSERQIALWDPNNLEEPIALQE--LDTSNGVLLPFYDPDTSIVYLCGKGDSSIR  289 (472)
T ss_pred             ccCCCcceeEEec--cCceeeeccccccccceeccCcccccCcceeEE--eccCCceEEeeecCCCCEEEEEecCCcceE
Confidence            2344445566665  56666664321 122333333332222222222  566677755   888899999988888888


Q ss_pred             EEecCCCc
Q psy5751         159 CMTIRNRV  166 (232)
Q Consensus       159 ~~~~~g~~  166 (232)
                      .+.+....
T Consensus       290 YyEit~d~  297 (472)
T KOG0303|consen  290 YFEITNEP  297 (472)
T ss_pred             EEEecCCC
Confidence            88776544

>KOG0308|consensus

Probab=92.06  E-value=8.2  Score=34.18  Aligned_cols=153  Identities=10%  Similarity=-0.010  Sum_probs=100.4

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE-----------EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV-----------ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN   72 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~-----------~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~   72 (232)
                      .+++-..++.|+.+--.++ +|+..+++....+.+           ........+++|... ++.++++....+-|...|
T Consensus       122 cla~~ak~~~lvaSgGLD~-~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~t~ivsGgtek~lr~wD  199 (735)
T KOG0308|consen  122 CLAYIAKNNELVASGGLDR-KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWD  199 (735)
T ss_pred             eeeecccCceeEEecCCCc-cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cceEEEecCcccceEEec
Confidence            5666667888888887777 999999984311111           111234567788776 567887777777788888


Q ss_pred             CCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc--EEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751          73 LNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR--EIFLKAADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        73 ~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~--~~~~~~~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      ........-+..+..+.+.+.++..+.++.-+.+   .+.|...++.-+.-  +..+..   .....+..++.=..+|..
T Consensus       200 prt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sS---DgtIrlWdLgqQrCl~T~~vH~---e~VWaL~~~~sf~~vYsG  273 (735)
T KOG0308|consen  200 PRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASS---DGTIRLWDLGQQRCLATYIVHK---EGVWALQSSPSFTHVYSG  273 (735)
T ss_pred             cccccceeeeeccccceEEEEEcCCCCeEeecCC---CceEEeeeccccceeeeEEecc---CceEEEeeCCCcceEEec
Confidence            8777666555567788899999986556655443   45687777764432  112222   235566667665677766


Q ss_pred             ECCCCcEEEEecCCC
Q psy5751         151 DADSKSLECMTIRNR  165 (232)
Q Consensus       151 d~~~~~i~~~~~~g~  165 (232)
                      + ..+.|++.++..-
T Consensus       274 ~-rd~~i~~Tdl~n~  287 (735)
T KOG0308|consen  274 G-RDGNIYRTDLRNP  287 (735)
T ss_pred             C-CCCcEEecccCCc
Confidence            4 4678999999874

>KOG0264|consensus

Probab=92.06  E-value=6.4  Score=32.95  Aligned_cols=158  Identities=7%  Similarity=0.101  Sum_probs=101.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      .|+.|+.......++-..+. .|...+++....       ..++...-...+.+++......||-+-...+.+...|...
T Consensus       181 ~glsWn~~~~g~Lls~~~d~-~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~  259 (422)
T KOG0264|consen  181 YGLSWNRQQEGTLLSGSDDH-TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRS  259 (422)
T ss_pred             cccccccccceeEeeccCCC-cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCC
Confidence            35666665555555554555 778777775433       1223333467788999988899998888888999998774


Q ss_pred             --CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          76 --DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        76 --~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                        .........+....+.+++.|.++.|.-+...  ...+...++..-..........-.....+..+|.+..+.-+...
T Consensus       260 ~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~--D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~  337 (422)
T KOG0264|consen  260 NTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSA--DKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGT  337 (422)
T ss_pred             CCCCCcccccccCCceeEEEeCCCCCceEEeccC--CCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEeccc
Confidence              33333333355677899999999888777653  34566666654433222222112344567778887777766666


Q ss_pred             CCcEEEEecC
Q psy5751         154 SKSLECMTIR  163 (232)
Q Consensus       154 ~~~i~~~~~~  163 (232)
                      .+++...|++
T Consensus       338 D~rl~vWDls  347 (422)
T KOG0264|consen  338 DRRLNVWDLS  347 (422)
T ss_pred             CCcEEEEecc
Confidence            6777777776

>KOG0639|consensus

Probab=91.71  E-value=8  Score=33.29  Aligned_cols=178  Identities=12%  Similarity=0.074  Sum_probs=100.4

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      +++.++ +..|.++...++ .|...++.....-..+.........|.+...+-+| |+..-.+.+...|+.....  +..
T Consensus       514 ALa~sp-DakvcFsccsdG-nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtkl-WTGGlDntvRcWDlregrq--lqq  588 (705)
T KOG0639|consen  514 ALAISP-DAKVCFSCCSDG-NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKL-WTGGLDNTVRCWDLREGRQ--LQQ  588 (705)
T ss_pred             hhhcCC-ccceeeeeccCC-cEEEEEcccceeeecccCCCCCceeEEecCCCcee-ecCCCccceeehhhhhhhh--hhh
Confidence            456666 566777777777 89999998644323333344567778787655555 6877777788777644321  111


Q ss_pred             -CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEEEE
Q psy5751          84 -KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLECM  160 (232)
Q Consensus        84 -~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~~~  160 (232)
                       .--....++...|...+|-+-.   +++.++.....+..+-.+...  -.-.-.|.|.+. |+-|++-...+  ..|+.
T Consensus       589 hdF~SQIfSLg~cP~~dWlavGM---ens~vevlh~skp~kyqlhlh--eScVLSlKFa~c-GkwfvStGkDnlLnawrt  662 (705)
T KOG0639|consen  589 HDFSSQIFSLGYCPTGDWLAVGM---ENSNVEVLHTSKPEKYQLHLH--ESCVLSLKFAYC-GKWFVSTGKDNLLNAWRT  662 (705)
T ss_pred             hhhhhhheecccCCCccceeeec---ccCcEEEEecCCccceeeccc--ccEEEEEEeccc-CceeeecCchhhhhhccC
Confidence             1123456677787666554443   456677777766655444332  123345666665 55555544444  34443


Q ss_pred             ecCCCceEEEec-CCCceEEEEE-ECCEEEEEeCCCC
Q psy5751         161 TIRNRVRRKVYS-NCTYPFGLSI-TDEKYYWTDWKTN  195 (232)
Q Consensus       161 ~~~g~~~~~~~~-~~~~p~gla~-~~~~ly~td~~~~  195 (232)
                      .+- ..  ++.. ......++.+ .++++.||-.+..
T Consensus       663 PyG-as--iFqskE~SsVlsCDIS~ddkyIVTGSGdk  696 (705)
T KOG0639|consen  663 PYG-AS--IFQSKESSSVLSCDISFDDKYIVTGSGDK  696 (705)
T ss_pred             ccc-cc--eeeccccCcceeeeeccCceEEEecCCCc
Confidence            332 22  2222 2333345555 4778888776553

>KOG0308|consensus

Probab=91.47  E-value=9.6  Score=33.77  Aligned_cols=151  Identities=11%  Similarity=0.107  Sum_probs=93.9

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      +++.+. ++.++++-..++ .|+..+.....+..-+.........|-++..+.++. +-...+.|...++.-+.+...+.
T Consensus       176 SLA~N~-t~t~ivsGgtek-~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~l-s~sSDgtIrlWdLgqQrCl~T~~  252 (735)
T KOG0308|consen  176 SLAMNQ-TGTIIVSGGTEK-DLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLL-SASSDGTIRLWDLGQQRCLATYI  252 (735)
T ss_pred             eeecCC-cceEEEecCccc-ceEEeccccccceeeeeccccceEEEEEcCCCCeEe-ecCCCceEEeeeccccceeeeEE
Confidence            455544 556776666666 677777665443223334456788888888777775 65666889999998777654444


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      -.-...+++..++.-..+|..+..   +.|++.++......+++-.. -.....+.++....-+ |+-+..+.|.|...
T Consensus       253 vH~e~VWaL~~~~sf~~vYsG~rd---~~i~~Tdl~n~~~~tlick~-daPv~~l~~~~~~~~~-WvtTtds~I~rW~~  326 (735)
T KOG0308|consen  253 VHKEGVWALQSSPSFTHVYSGGRD---GNIYRTDLRNPAKSTLICKE-DAPVLKLHLHEHDNSV-WVTTTDSSIKRWKL  326 (735)
T ss_pred             eccCceEEEeeCCCcceEEecCCC---CcEEecccCCchhheEeecC-CCchhhhhhccccCCc-eeeeccccceecCC
Confidence            344458899999877888887754   46999999875444433322 2333455555443344 55555555665443

>COG3211 PhoX Predicted phosphatase [General function prediction only]

Probab=91.46  E-value=6.7  Score=34.30  Aligned_cols=112  Identities=11%  Similarity=0.031  Sum_probs=64.0

Q ss_pred             CCCCccEEEEeecCCeEEEEeCCCC----------------eEEEEeCCCCC-------CEEEEe---------------
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQMD----------------TISMANLNDDQ-------PKVIVS---------------   83 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~~~----------------~I~~~~~~g~~-------~~~~~~---------------   83 (232)
                      .+..|+++++.+..+.+|++.+.++                +|+++-..+..       -..++.               
T Consensus       415 ~mdRpE~i~~~p~~g~Vy~~lTNn~~r~~~~aNpr~~n~~G~I~r~~p~~~d~t~~~ftWdlF~~aG~~~~~~~~~~~~~  494 (616)
T COG3211         415 PMDRPEWIAVNPGTGEVYFTLTNNGKRSDDAANPRAKNGYGQIVRWIPATGDHTDTKFTWDLFVEAGNPSVLEGGASANI  494 (616)
T ss_pred             cccCccceeecCCcceEEEEeCCCCccccccCCCcccccccceEEEecCCCCccCccceeeeeeecCCccccccccccCc
Confidence            4568999999999999999976543                67776544421       112221               


Q ss_pred             --CCCCCceEEEEeCCCCeEEEEEcCCC---CCc---EEEEeCCCCC---cEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          84 --KDLVNPRGIVVHPYYRKLFWSDWNRS---GPK---IEWSNLDGTD---REIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        84 --~~~~~p~~iavd~~~~~ly~~d~~~~---~~~---I~~~~~~g~~---~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                        ..++.|.+|++|+ .|+|+++.-+..   ...   +..+...+..   ....+..+.-..-.|.++.++.+.||+.-.
T Consensus       495 ~~~~f~~PDnl~fD~-~GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~t~P~g~E~tG~~FspD~~TlFV~vQ  573 (616)
T COG3211         495 NANWFNSPDNLAFDP-WGRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFLTGPIGCEFTGPCFSPDGKTLFVNVQ  573 (616)
T ss_pred             ccccccCCCceEECC-CCCEEEEecCCCCccCcccccccccccCCCccceeeeeccCCCcceeecceeCCCCceEEEEec
Confidence              1255699999998 677777643211   110   1111111111   112222210123458899999999999865


Q ss_pred             CC
Q psy5751         153 DS  154 (232)
Q Consensus       153 ~~  154 (232)
                      +-
T Consensus       574 HP  575 (616)
T COG3211         574 HP  575 (616)
T ss_pred             CC
Confidence            43

>KOG0276|consensus

Probab=91.40  E-value=9.7  Score=33.69  Aligned_cols=195  Identities=9%  Similarity=0.007  Sum_probs=107.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      -++++++.+-++ .+...++ .+...+.+....-+-+. ... ..+.-.+-. ..+..++.+...+|.+.+++...+...
T Consensus        17 KsVd~HPtePw~-la~LynG-~V~IWnyetqtmVksfeV~~~-PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ekV~~   92 (794)
T KOG0276|consen   17 KSVDFHPTEPWI-LAALYNG-DVQIWNYETQTMVKSFEVSEV-PVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEKVKT   92 (794)
T ss_pred             eeeecCCCCceE-EEeeecC-eeEEEecccceeeeeeeeccc-chhhheeee-ccceEEEecCCceEEEEecccceeeEE
Confidence            478888844444 4455555 56666666432211111 111 223333443 344556777778999999988877777


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      ++-+....+.++++|..= .+.+.+.  .-.|...+.++.-.....-+.+-+....++|.|....-|.+-+-...|....
T Consensus        93 FeAH~DyIR~iavHPt~P-~vLtsSD--Dm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWs  169 (794)
T KOG0276|consen   93 FEAHSDYIRSIAVHPTLP-YVLTSSD--DMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWS  169 (794)
T ss_pred             eeccccceeeeeecCCCC-eEEecCC--ccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEE
Confidence            776777889999999444 3333322  4457777777664433333333667788999997666666655455444444


Q ss_pred             cCCCce-EEEecCCCceEEEEEE--CCEEE-EEeCCCCcEEEEeCCC
Q psy5751         162 IRNRVR-RKVYSNCTYPFGLSIT--DEKYY-WTDWKTNRIESANKEG  204 (232)
Q Consensus       162 ~~g~~~-~~~~~~~~~p~gla~~--~~~ly-~td~~~~~i~~~~~~g  204 (232)
                      +..... .++.......+.+.++  +++-| +|-.....+..-+.++
T Consensus       170 lgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt  216 (794)
T KOG0276|consen  170 LGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT  216 (794)
T ss_pred             cCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch
Confidence            433222 1222233334455553  33333 3334444444444443

>KOG0273|consensus

Probab=91.25  E-value=8.5  Score=32.72  Aligned_cols=73  Identities=19%  Similarity=0.172  Sum_probs=55.3

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN  117 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~  117 (232)
                      ....++.|||+++.=|.+....+.|+++.++...+...+..+-+..++|..+| ++.|.-+-..-...+|+-+.
T Consensus       317 ~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~  389 (524)
T KOG0273|consen  317 HSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMG  389 (524)
T ss_pred             ccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECC-CCceEEEecCCCeeEeeecC
Confidence            45557999999999999998889999999999887665555777889999998 56666554432355666543

>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]

Probab=91.22  E-value=6.1  Score=31.03  Aligned_cols=101  Identities=14%  Similarity=0.090  Sum_probs=59.4

Q ss_pred             EeCCCCeEEEEeCCCCC--CEEEEe------CCCCCceEEEEeC--CCCeEEEEEcCCCCCcEEEEeCC----CCCcEEE
Q psy5751          61 TDSQMDTISMANLNDDQ--PKVIVS------KDLVNPRGIVVHP--YYRKLFWSDWNRSGPKIEWSNLD----GTDREIF  126 (232)
Q Consensus        61 ~d~~~~~I~~~~~~g~~--~~~~~~------~~~~~p~~iavd~--~~~~ly~~d~~~~~~~I~~~~~~----g~~~~~~  126 (232)
                      +|..+..|..+.+++..  .+.+..      ++...+.|+++..  ..|-+|+.-.++ .+.|..+.+-    |......
T Consensus       119 SdR~~~~i~~y~Idp~~~~L~sitD~n~p~ss~~s~~YGl~lyrs~ktgd~yvfV~~~-qG~~~Qy~l~d~gnGkv~~k~  197 (364)
T COG4247         119 SDRQNDKIVFYKIDPNPQYLESITDSNAPYSSSSSSAYGLALYRSPKTGDYYVFVNRR-QGDIAQYKLIDQGNGKVGTKL  197 (364)
T ss_pred             ccccCCeEEEEEeCCCccceeeccCCCCccccCcccceeeEEEecCCcCcEEEEEecC-CCceeEEEEEecCCceEccee
Confidence            45556677766666544  333332      4677888988653  346666665543 3567666642    2111112


Q ss_pred             EEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751         127 LKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus       127 ~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      +.. ..-.+..|+..|...+.||.++.. --||....+
T Consensus       198 vR~fk~~tQTEG~VaDdEtG~LYIaeEd-vaiWK~~Ae  234 (364)
T COG4247         198 VRQFKIPTQTEGMVADDETGFLYIAEED-VAIWKYEAE  234 (364)
T ss_pred             eEeeecCCcccceeeccccceEEEeecc-ceeeecccC
Confidence            211 112466799999999999999753 347777654

>KOG0282|consensus

Probab=91.13  E-value=7.1  Score=33.20  Aligned_cols=192  Identities=13%  Similarity=0.054  Sum_probs=111.9

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      ++.|.+....|+.+-..+. .|+..++-+... -.........+..++....+..+. +-.....|-..|...+.+...+
T Consensus       219 ai~~fp~~~hLlLS~gmD~-~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fL-S~sfD~~lKlwDtETG~~~~~f  296 (503)
T KOG0282|consen  219 AIQWFPKKGHLLLSGGMDG-LVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFL-SASFDRFLKLWDTETGQVLSRF  296 (503)
T ss_pred             hhhhccceeeEEEecCCCc-eEEEEEEecCcceehhhhcchhhhhhhhccccCCeee-eeecceeeeeeccccceEEEEE
Confidence            5566677788888887777 777776654221 111222224556666665444333 4444556667777776666655


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      . ....|.-+-..|.+..+|++...  ..+|...++....+..-... ++...+.+.|-+. ++=|++.+....+...+.
T Consensus       297 ~-~~~~~~cvkf~pd~~n~fl~G~s--d~ki~~wDiRs~kvvqeYd~-hLg~i~~i~F~~~-g~rFissSDdks~riWe~  371 (503)
T KOG0282|consen  297 H-LDKVPTCVKFHPDNQNIFLVGGS--DKKIRQWDIRSGKVVQEYDR-HLGAILDITFVDE-GRRFISSSDDKSVRIWEN  371 (503)
T ss_pred             e-cCCCceeeecCCCCCcEEEEecC--CCcEEEEeccchHHHHHHHh-hhhheeeeEEccC-CceEeeeccCccEEEEEc
Confidence            5 33467778888877788888754  67899888876542211122 2777788888776 444555554444444444


Q ss_pred             CCC-ceEEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         163 RNR-VRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       163 ~g~-~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +-. ..+.++.  +...| .+++. ++..+.++...++|..+...
T Consensus       372 ~~~v~ik~i~~~~~hsmP-~~~~~P~~~~~~aQs~dN~i~ifs~~  415 (503)
T KOG0282|consen  372 RIPVPIKNIADPEMHTMP-CLTLHPNGKWFAAQSMDNYIAIFSTV  415 (503)
T ss_pred             CCCccchhhcchhhccCc-ceecCCCCCeehhhccCceEEEEecc
Confidence            322 2222222  22222 34554 66777777777777777643

>KOG3914|consensus

Probab=91.05  E-value=7.9  Score=32.04  Aligned_cols=163  Identities=10%  Similarity=0.043  Sum_probs=94.0

Q ss_pred             CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      .+..+...+..+.|++++.. .+....++.+... ..+..  .--.+|..+.+.......-+++..++...+...+.+..
T Consensus        64 a~~~~~~s~~~~llAv~~~~-K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~  142 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSS-KQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG  142 (390)
T ss_pred             cccccccCCCceEEEEEeCC-CceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence            34444555556677777665 3444455444442 11111  23456778887776777788886655544554444422


Q ss_pred             CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ecCCCceEEEEEECCEEEEEeCCCCcEEE
Q psy5751         122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YSNCTYPFGLSITDEKYYWTDWKTNRIES  199 (232)
Q Consensus       122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~~~~~p~gla~~~~~ly~td~~~~~i~~  199 (232)
                      ..+.++-.  +.--.++++.++..+|..+|. ..+|+...+..... +.+ +..-.-...+++..+.+.|+-.+.+.|+.
T Consensus       143 ~~~~~lGh--vSml~dVavS~D~~~IitaDR-DEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~  219 (390)
T KOG3914|consen  143 RCEPILGH--VSMLLDVAVSPDDQFIITADR-DEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRL  219 (390)
T ss_pred             Ccchhhhh--hhhhheeeecCCCCEEEEecC-CceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEE
Confidence            22222222  556788999999888888875 55677777765432 111 11111134667777777787777777777


Q ss_pred             EeCC-CCCcceEE
Q psy5751         200 ANKE-GERAPSIA  211 (232)
Q Consensus       200 ~~~~-g~~~~~i~  211 (232)
                      =+.. |+.+....
T Consensus       220 Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  220 WDITSGKLLDTCD  232 (390)
T ss_pred             EecccCCcccccc
Confidence            7765 56555443

>PHA02713 hypothetical protein; Provisional

Probab=90.96  E-value=11  Score=33.42  Aligned_cols=191  Identities=10%  Similarity=0.081  Sum_probs=100.9

Q ss_pred             CCEEEEEEcCC-C----CcEEEEEcCCCceeEEEeCCCCCcc-EEEEeecCCeEEEEeCCC-----CeEEEEeCCCCCCE
Q psy5751          11 EGQVYYSSVAD-K----SSIKRAHLDGKNVEDVITTNIRSPE-GLTFDWVNRVLYWTDSQM-----DTISMANLNDDQPK   79 (232)
Q Consensus        11 ~~~ly~~d~~~-~----~~i~~~~~~g~~~~~~~~~~~~~p~-gl~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~   79 (232)
                      ++.||+.--.. +    ..+.++++......+ +. .+..+. +.++-..++.||+....+     ..+.++|+....=.
T Consensus       303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~-~~-~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~  380 (557)
T PHA02713        303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVE-LP-PMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWK  380 (557)
T ss_pred             CCEEEEEcCCCCCCCccceEEEEECCCCeEee-CC-CCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEE
Confidence            56788774321 1    146777776554322 22 222222 223333368899876542     34777776643211


Q ss_pred             EEEeCCCCCce---EEEEeCCCCeEEEEEcCCC---------------------CCcEEEEeCCCCCcEEEEEcCC-CCC
Q psy5751          80 VIVSKDLVNPR---GIVVHPYYRKLFWSDWNRS---------------------GPKIEWSNLDGTDREIFLKAAD-LKL  134 (232)
Q Consensus        80 ~~~~~~~~~p~---~iavd~~~~~ly~~d~~~~---------------------~~~I~~~~~~g~~~~~~~~~~~-~~~  134 (232)
                      .+  ..+..|+   ++++.  +|.||+......                     ...++++++....=+.+..... ...
T Consensus       381 ~~--~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~  456 (557)
T PHA02713        381 ML--PDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIR  456 (557)
T ss_pred             EC--CCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCccccc
Confidence            11  1233332   34444  799999753211                     1346666655432222211110 112


Q ss_pred             cceEEEeCCCCEEEEEECCC------CcEEEEecCC-CceEEEecCCCce---EEEEEECCEEEEEeCCCC--cEEEEeC
Q psy5751         135 PNSLAVDFRTDELCWVDADS------KSLECMTIRN-RVRRKVYSNCTYP---FGLSITDEKYYWTDWKTN--RIESANK  202 (232)
Q Consensus       135 p~~l~~d~~~~~Ly~~d~~~------~~i~~~~~~g-~~~~~~~~~~~~p---~gla~~~~~ly~td~~~~--~i~~~~~  202 (232)
                      + ++++-  +++||+.-...      ..+++.+++. ..-+.+ ..++.+   .|+++.+|+||++-..++  .+.++++
T Consensus       457 ~-~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~-~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~  532 (557)
T PHA02713        457 P-GVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELI-TTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNV  532 (557)
T ss_pred             C-cEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEc-cccCcccccceeEEECCEEEEEeeecceeehhhcCc
Confidence            2 33322  38999984321      3478888886 333333 233333   488889999999865444  6788888


Q ss_pred             CCCCcceEE
Q psy5751         203 EGERAPSIA  211 (232)
Q Consensus       203 ~g~~~~~i~  211 (232)
                      ....++.+.
T Consensus       533 ~~~~W~~~~  541 (557)
T PHA02713        533 YTYEWNHIC  541 (557)
T ss_pred             ccccccchh
Confidence            877777543

>KOG0286|consensus

Probab=90.51  E-value=7.7  Score=30.98  Aligned_cols=138  Identities=12%  Similarity=0.064  Sum_probs=89.2

Q ss_pred             EEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceE
Q psy5751          60 WTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSL  138 (232)
Q Consensus        60 ~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l  138 (232)
                      .|.++....-..|++.......+..+..+..++.+.|.+++.|++-..-...+++  ++.... ++.+...  ..-.|.+
T Consensus       160 lT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklW--D~R~~~c~qtF~gh--esDINsv  235 (343)
T KOG0286|consen  160 LTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLW--DVRSGQCVQTFEGH--ESDINSV  235 (343)
T ss_pred             EecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeee--eccCcceeEeeccc--ccccceE
Confidence            3555656667778777776666667888999999999899999987542344454  333222 3333222  4557888


Q ss_pred             EEeCCCCEEEEEECCCCcEEEEecCCCceEEEec--C-CCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         139 AVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS--N-CTYPFGLSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       139 ~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~--~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      .+.|. |.-|.+-+..+....+|++....-.+++  . .....++++- .|+|.++-+....+..-+-
T Consensus       236 ~ffP~-G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt  302 (343)
T KOG0286|consen  236 RFFPS-GDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT  302 (343)
T ss_pred             EEccC-CCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence            88886 6777776767777788887654433444  2 2333577774 8888888666555544443

>KOG0282|consensus

Probab=90.42  E-value=5.3  Score=33.90  Aligned_cols=153  Identities=8%  Similarity=0.065  Sum_probs=94.5

Q ss_pred             CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-CEEEEeCCCCCceEEEEeCCCCeEEEE-EcCCCCCcEEEEeCCCCC
Q psy5751          45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-PKVIVSKDLVNPRGIVVHPYYRKLFWS-DWNRSGPKIEWSNLDGTD  122 (232)
Q Consensus        45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~iavd~~~~~ly~~-d~~~~~~~I~~~~~~g~~  122 (232)
                      ....+.+=+....|+.+-...+.|...+.-+.. +...+.......++++... .|.=|.+ ...   .-|...+.+.+.
T Consensus       216 gvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~-~g~~fLS~sfD---~~lKlwDtETG~  291 (503)
T KOG0282|consen  216 GVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNN-CGTSFLSASFD---RFLKLWDTETGQ  291 (503)
T ss_pred             ccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccc-cCCeeeeeecc---eeeeeeccccce
Confidence            444444555567787777777888887764422 2222222333445666665 3333333 222   224445555444


Q ss_pred             cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEE-ECCEEEEEeCCCCcEEEE
Q psy5751         123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSI-TDEKYYWTDWKTNRIESA  200 (232)
Q Consensus       123 ~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~  200 (232)
                      ...-+..  -.-|..+.+.+++..+|++=...++|...|++.++. +.....++....+.+ ++++=+++-.....+...
T Consensus       292 ~~~~f~~--~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riW  369 (503)
T KOG0282|consen  292 VLSRFHL--DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIW  369 (503)
T ss_pred             EEEEEec--CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEE
Confidence            4444443  467999999999889999988889999999997653 222336666777787 477777776666655555


Q ss_pred             eCC
Q psy5751         201 NKE  203 (232)
Q Consensus       201 ~~~  203 (232)
                      .-+
T Consensus       370 e~~  372 (503)
T KOG0282|consen  370 ENR  372 (503)
T ss_pred             EcC
Confidence            544

>KOG0319|consensus

Probab=90.21  E-value=14  Score=33.33  Aligned_cols=197  Identities=11%  Similarity=0.034  Sum_probs=111.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeE-EEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVED-VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~-~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      ++++.+.++.||.+--. . .+..+.++....-. .-...-.....+++|+.+ .|--+-...+++.+.|+.+..+...+
T Consensus        67 a~~l~~d~~~L~~a~rs-~-llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g-~LlAtggaD~~v~VWdi~~~~~th~f  143 (775)
T KOG0319|consen   67 ALALTPDEEVLVTASRS-Q-LLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTG-TLLATGGADGRVKVWDIKNGYCTHSF  143 (775)
T ss_pred             eeeecCCccEEEEeecc-c-eEEEEEcccchHhHhHhhccCCCeEEEEEcCCC-ceEEeccccceEEEEEeeCCEEEEEe
Confidence            56677766777655422 2 45566666432211 111112345678999855 55545555688999999999887777


Q ss_pred             eCCCCCceEEEEeCCCCeEEEE-EcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWS-DWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~-d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      .....-...+.+.|.-  .+|- -.+...+.+...++.....-...-..+.....+|++.+++..+. +-.....|...+
T Consensus       144 kG~gGvVssl~F~~~~--~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~l-s~~RDkvi~vwd  220 (775)
T KOG0319|consen  144 KGHGGVVSSLLFHPHW--NRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELL-SVGRDKVIIVWD  220 (775)
T ss_pred             cCCCceEEEEEeCCcc--chhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEE-EeccCcEEEEee
Confidence            6444455667777532  2322 22334677888887743321000011255678999998855543 334455555666


Q ss_pred             cCCCceEEEecCCCceEEEEE-EC-----CEEEEEeCCCCcEEEEeCCCCC
Q psy5751         162 IRNRVRRKVYSNCTYPFGLSI-TD-----EKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       162 ~~g~~~~~~~~~~~~p~gla~-~~-----~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      +...+....+.....-.++++ .+     +..+.|-.+++.+...+..+..
T Consensus       221 ~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~  271 (775)
T KOG0319|consen  221 LVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGK  271 (775)
T ss_pred             hhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccch
Confidence            633332223333333445554 33     3467777777888888776544

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=90.16  E-value=7.7  Score=30.43  Aligned_cols=201  Identities=12%  Similarity=0.036  Sum_probs=109.7

Q ss_pred             EEEEEeCCCCEEEEEE--cCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEE--eCCCCCC
Q psy5751           3 IGITVDCVEGQVYYSS--VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMA--NLNDDQP   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d--~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~--~~~g~~~   78 (232)
                      .+.++.+..+.+.+..  .... .++....++... .+...  .......+|.. +.++..+.........  ..+|...
T Consensus        27 ~s~AvS~dg~~~A~v~~~~~~~-~L~~~~~~~~~~-~~~~g--~~l~~PS~d~~-g~~W~v~~~~~~~~~~~~~~~g~~~  101 (253)
T PF10647_consen   27 TSPAVSPDGSRVAAVSEGDGGR-SLYVGPAGGPVR-PVLTG--GSLTRPSWDPD-GWVWTVDDGSGGVRVVRDSASGTGE  101 (253)
T ss_pred             cceEECCCCCeEEEEEEcCCCC-EEEEEcCCCcce-eeccC--CccccccccCC-CCEEEEEcCCCceEEEEecCCCcce
Confidence            3556666666665555  3333 788777665443 33221  24444567775 6677776654433333  3445554


Q ss_pred             EEEEe-CCCC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeC--CCCC-cEEEEEc-----CCCCCcceEEEeCCCCEEE
Q psy5751          79 KVIVS-KDLV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL--DGTD-REIFLKA-----ADLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        79 ~~~~~-~~~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~--~g~~-~~~~~~~-----~~~~~p~~l~~d~~~~~Ly  148 (232)
                      ...+. .... ....+.++|...++-+.-...+.++|+....  ++.. ...+...     .......+++...++..+.
T Consensus       102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V  181 (253)
T PF10647_consen  102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV  181 (253)
T ss_pred             eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence            44444 2333 6788999998777766553334566776543  2222 1111111     1134556788877744444


Q ss_pred             EEECCCCcEEE-EecCCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeCCCCCcceEE
Q psy5751         149 WVDADSKSLEC-MTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANKEGERAPSIA  211 (232)
Q Consensus       149 ~~d~~~~~i~~-~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~~g~~~~~i~  211 (232)
                      .+......+.. +..+|...+.+......+.-+++  ....+|.++.  +.+.+ ...+..++.+.
T Consensus       182 ~~~~~~~~~~~~v~~dG~~~~~l~~~~~~~~v~a~~~~~~~~~~t~~--~~~~~-~~~~~~W~~v~  244 (253)
T PF10647_consen  182 LGRSAGGPVVRLVSVDGGPSTPLPSVNLGVPVVAVAASPSTVYVTDD--GGVLQ-SRSGASWREVP  244 (253)
T ss_pred             EeCCCCCceeEEEEccCCcccccCCCCCCcceEEeeCCCcEEEEECC--CcEEE-CCCCCcceEcc
Confidence            44444455666 88898877666333333333333  4667888774  44554 55566666543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG0281|consensus

Probab=89.96  E-value=6.8  Score=32.07  Aligned_cols=177  Identities=11%  Similarity=0.063  Sum_probs=99.1

Q ss_pred             CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC----CEEEEeCCCC
Q psy5751          12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ----PKVIVSKDLV   87 (232)
Q Consensus        12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~   87 (232)
                      +++.++-..+. .|...+.+....-+++........++.+.  ++ ..++.+....|.+.+++...    .+++. ...+
T Consensus       247 ~rviisGSSDs-TvrvWDv~tge~l~tlihHceaVLhlrf~--ng-~mvtcSkDrsiaVWdm~sps~it~rrVLv-GHrA  321 (499)
T KOG0281|consen  247 ERVIVSGSSDS-TVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NG-YMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRA  321 (499)
T ss_pred             ceEEEecCCCc-eEEEEeccCCchhhHHhhhcceeEEEEEe--CC-EEEEecCCceeEEEeccCchHHHHHHHHh-hhhh
Confidence            34666655555 77777877554323333344566677776  34 55688888899999998765    12222 3555


Q ss_pred             CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR  167 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~  167 (232)
                      ..+-+-+|  .+ +.++.++  ...|...++......-.+.    ..-.|||--.-+++|.++-+....|...++..+..
T Consensus       322 aVNvVdfd--~k-yIVsASg--DRTikvW~~st~efvRtl~----gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~c  392 (499)
T KOG0281|consen  322 AVNVVDFD--DK-YIVSASG--DRTIKVWSTSTCEFVRTLN----GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC  392 (499)
T ss_pred             heeeeccc--cc-eEEEecC--CceEEEEeccceeeehhhh----cccccceehhccCeEEEecCCCceEEEEeccccHH
Confidence            55555555  34 3344443  3457776666443222222    23467776666789999888888888888875543


Q ss_pred             EEEecC-CCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         168 RKVYSN-CTYPFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       168 ~~~~~~-~~~p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      -.++++ -.....+.+++.++ ++-...++|..-+..
T Consensus       393 LRvLeGHEeLvRciRFd~krI-VSGaYDGkikvWdl~  428 (499)
T KOG0281|consen  393 LRVLEGHEELVRCIRFDNKRI-VSGAYDGKIKVWDLQ  428 (499)
T ss_pred             HHHHhchHHhhhheeecCcee-eeccccceEEEEecc
Confidence            222221 11122333444443 444445656555554

>KOG0646|consensus

Probab=89.78  E-value=11  Score=31.83  Aligned_cols=191  Identities=12%  Similarity=0.033  Sum_probs=100.5

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-------
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-------   76 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~-------   76 (232)
                      +++-++ .+.+.++..-.+ .||-..+..+..-.++......+..|.+.. ++..+++-...+.+.+..+...       
T Consensus        86 al~s~n-~G~~l~ag~i~g-~lYlWelssG~LL~v~~aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~lv~a~~~~  162 (476)
T KOG0646|consen   86 ALASSN-LGYFLLAGTISG-NLYLWELSSGILLNVLSAHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLTDLVSADNDH  162 (476)
T ss_pred             eeecCC-CceEEEeecccC-cEEEEEeccccHHHHHHhhccceeEEEEeC-CCcEEEecCCCccEEEEEEEeecccccCC
Confidence            555555 444444443344 688888886543222333446777777766 5667778888888877654221       


Q ss_pred             CCE--EEEeCCCCCceEEEEeC--CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          77 QPK--VIVSKDLVNPRGIVVHP--YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        77 ~~~--~~~~~~~~~p~~iavd~--~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      .++  -.++.+.-...++-+..  .+.+||-+..+   ..+...++....  .++....-..++++++||...++|.. .
T Consensus       163 ~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D---~t~k~wdlS~g~--LLlti~fp~si~av~lDpae~~~yiG-t  236 (476)
T KOG0646|consen  163 SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASED---RTIKLWDLSLGV--LLLTITFPSSIKAVALDPAERVVYIG-T  236 (476)
T ss_pred             CccceeeeccCcceeEEEEecCCCccceEEEecCC---ceEEEEEeccce--eeEEEecCCcceeEEEcccccEEEec-C
Confidence            111  12222222233444443  13455555433   223444444332  22221112457899999997777665 5


Q ss_pred             CCCcEEEEecCCCc-----------------eEEEecCC--CceEEEEE-ECCEEEEEeCCCCcEEEEeCC
Q psy5751         153 DSKSLECMTIRNRV-----------------RRKVYSNC--TYPFGLSI-TDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       153 ~~~~i~~~~~~g~~-----------------~~~~~~~~--~~p~gla~-~~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..++|+...+.+..                 ...+....  .....||+ .++.|..+-...+.|..-+..
T Consensus       237 ~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~  307 (476)
T KOG0646|consen  237 EEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY  307 (476)
T ss_pred             CcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence            57788887775322                 11111111  23345666 466666665555666555544

>KOG1517|consensus

Probab=89.37  E-value=20  Score=34.04  Aligned_cols=165  Identities=10%  Similarity=0.101  Sum_probs=97.6

Q ss_pred             ccEEEEeec--CCeEEEEeCCCCeEEEEeCCCCCCEE-EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe--CCC
Q psy5751          46 PEGLTFDWV--NRVLYWTDSQMDTISMANLNDDQPKV-IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN--LDG  120 (232)
Q Consensus        46 p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~~~~~-~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~--~~g  120 (232)
                      -.|+.+||.  .+.||++.. ...|...|.+-..+.. +-.+...-+..+.-+...|.++.+...  .+.+..++  +..
T Consensus      1166 ~~~~v~dWqQ~~G~Ll~tGd-~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfa--DGsvRvyD~R~a~ 1242 (1387)
T KOG1517|consen 1166 GTGLVVDWQQQSGHLLVTGD-VRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFA--DGSVRVYDRRMAP 1242 (1387)
T ss_pred             CCCeeeehhhhCCeEEecCC-eeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeec--CCceEEeecccCC
Confidence            355888984  467886653 5567778887665432 222444567778877778888888765  34454444  443


Q ss_pred             CCcEEEEEcCC--CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-CC----C-ceEEEEEECCEEEEEeC
Q psy5751         121 TDREIFLKAAD--LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NC----T-YPFGLSITDEKYYWTDW  192 (232)
Q Consensus       121 ~~~~~~~~~~~--~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~----~-~p~gla~~~~~ly~td~  192 (232)
                      ....+......  -....++.+-+.+-.=.++-+.+|.|...++++.....+.+ ..    + .-..+.+++.--.++-.
T Consensus      1243 ~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsG 1322 (1387)
T KOG1517|consen 1243 PDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASG 1322 (1387)
T ss_pred             ccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeec
Confidence            33233332221  11245667766422224666778999999999853333332 11    1 23456666443344444


Q ss_pred             CCCcEEEEeCCCCCcceEEec
Q psy5751         193 KTNRIESANKEGERAPSIALD  213 (232)
Q Consensus       193 ~~~~i~~~~~~g~~~~~i~~~  213 (232)
                      ....|...+..|.++..+++.
T Consensus      1323 s~q~ikIy~~~G~~l~~~k~n 1343 (1387)
T KOG1517|consen 1323 SAQLIKIYSLSGEQLNIIKYN 1343 (1387)
T ss_pred             CcceEEEEecChhhhcccccC
Confidence            448888889999888877754

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=88.79  E-value=2.6  Score=35.61  Aligned_cols=62  Identities=13%  Similarity=0.196  Sum_probs=36.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe----CC---------------CCCccEEEEeecCCeEEEEe
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT----TN---------------IRSPEGLTFDWVNRVLYWTD   62 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~----~~---------------~~~p~gl~~d~~~~~ly~~d   62 (232)
                      +..|.....+..||++++.++ .|+.+++......+++.    .+               ...|.=|.+.+.+++||||.
T Consensus       314 itDI~iSlDDrfLYvs~W~~G-dvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  314 ITDILISLDDRFLYVSNWLHG-DVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             ---EEE-TTS-EEEEEETTTT-EEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred             eEeEEEccCCCEEEEEcccCC-cEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence            456778888999999999999 99999998754333321    11               12456677888899999997


Q ss_pred             CC
Q psy5751          63 SQ   64 (232)
Q Consensus        63 ~~   64 (232)
                      +-
T Consensus       393 SL  394 (461)
T PF05694_consen  393 SL  394 (461)
T ss_dssp             --
T ss_pred             ec
Confidence            43

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG0319|consensus

Probab=88.52  E-value=18  Score=32.54  Aligned_cols=171  Identities=9%  Similarity=0.044  Sum_probs=99.1

Q ss_pred             EEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE--EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EE
Q psy5751          49 LTFDWVNRVLYWTDSQMDTISMANLNDDQPKV--IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EI  125 (232)
Q Consensus        49 l~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~  125 (232)
                      ++++..++.||.+..  ++|-..+........  .-.+.......+++.|.+..||.+...+   .+...++..... +.
T Consensus        25 ~~~s~nG~~L~t~~~--d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~---llrv~~L~tgk~irs   99 (775)
T KOG0319|consen   25 VAWSSNGQHLYTACG--DRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQ---LLRVWSLPTGKLIRS   99 (775)
T ss_pred             eeECCCCCEEEEecC--ceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccc---eEEEEEcccchHhHh
Confidence            899998899986543  367777665554431  1114555667899999877777776432   245566654422 11


Q ss_pred             EEEcCCCCCc-ceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEE-ECCEEE---EEeCCCCcEEEE
Q psy5751         126 FLKAADLKLP-NSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI-TDEKYY---WTDWKTNRIESA  200 (232)
Q Consensus       126 ~~~~~~~~~p-~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~-~~~~ly---~td~~~~~i~~~  200 (232)
                      ... . ...| ..+++|+.+ .|.-+-...+++...++.+.....-..+.+.+..... .....+   .+-...+.+..-
T Consensus       100 wKa-~-He~Pvi~ma~~~~g-~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vw  176 (775)
T KOG0319|consen  100 WKA-I-HEAPVITMAFDPTG-TLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVW  176 (775)
T ss_pred             Hhh-c-cCCCeEEEEEcCCC-ceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEE
Confidence            111 1 2344 578999985 5554444567888899998877666667666665544 444444   455555666666


Q ss_pred             eCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         201 NKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       201 ~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      |....... +..-..+.+...++++.++
T Consensus       177 nl~~~~tc-l~~~~~H~S~vtsL~~~~d  203 (775)
T KOG0319|consen  177 NLNDKRTC-LHTMILHKSAVTSLAFSED  203 (775)
T ss_pred             EcccCchH-HHHHHhhhhheeeeeeccC
Confidence            65522211 0000123445566665554

>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]

Probab=88.34  E-value=11  Score=29.70  Aligned_cols=76  Identities=17%  Similarity=0.124  Sum_probs=45.0

Q ss_pred             CCCCCccEEEEee--cCCeEEE-EeCCCCeEEEEeCCCC----CCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCC
Q psy5751          41 TNIRSPEGLTFDW--VNRVLYW-TDSQMDTISMANLNDD----QPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGP  111 (232)
Q Consensus        41 ~~~~~p~gl~~d~--~~~~ly~-~d~~~~~I~~~~~~g~----~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~  111 (232)
                      .++..+.|+++..  ..+..|+ .....+.|..+.+-..    .....+.  .-..+..||..|...|.||+++-.   -
T Consensus       150 s~~s~~YGl~lyrs~ktgd~yvfV~~~qG~~~Qy~l~d~gnGkv~~k~vR~fk~~tQTEG~VaDdEtG~LYIaeEd---v  226 (364)
T COG4247         150 SSSSSAYGLALYRSPKTGDYYVFVNRRQGDIAQYKLIDQGNGKVGTKLVRQFKIPTQTEGMVADDETGFLYIAEED---V  226 (364)
T ss_pred             cCcccceeeEEEecCCcCcEEEEEecCCCceeEEEEEecCCceEcceeeEeeecCCcccceeeccccceEEEeecc---c
Confidence            4567899999864  3333332 3333466766654221    1222222  123356799999999999999843   3


Q ss_pred             cEEEEeCC
Q psy5751         112 KIEWSNLD  119 (232)
Q Consensus       112 ~I~~~~~~  119 (232)
                      -||+...+
T Consensus       227 aiWK~~Ae  234 (364)
T COG4247         227 AIWKYEAE  234 (364)
T ss_pred             eeeecccC
Confidence            48876654

>KOG0306|consensus

Probab=88.21  E-value=20  Score=32.57  Aligned_cols=151  Identities=15%  Similarity=0.083  Sum_probs=89.9

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~   80 (232)
                      .++.+.+ ++++..+...++ .+..+-++.-..-.-+ ...+ ...++.+.+ ..++.+|.+....+-..-+|=+.+ +.
T Consensus       512 L~v~~Sp-dgk~LaVsLLdn-TVkVyflDtlKFflsLYGHkL-PV~smDIS~-DSklivTgSADKnVKiWGLdFGDCHKS  587 (888)
T KOG0306|consen  512 LCVSVSP-DGKLLAVSLLDN-TVKVYFLDTLKFFLSLYGHKL-PVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDCHKS  587 (888)
T ss_pred             EEEEEcC-CCcEEEEEeccC-eEEEEEecceeeeeeeccccc-ceeEEeccC-CcCeEEeccCCCceEEeccccchhhhh
Confidence            4677877 555555666666 6777777765432111 1222 345666666 455677887777777776665554 34


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ++. +......+.+-| ...+||+-..  .++|.+.+-+.-..-..+.. .......+++.+.++.+ ++-++...|...
T Consensus       588 ~fA-HdDSvm~V~F~P-~~~~FFt~gK--D~kvKqWDg~kFe~iq~L~~-H~~ev~cLav~~~G~~v-vs~shD~sIRlw  661 (888)
T KOG0306|consen  588 FFA-HDDSVMSVQFLP-KTHLFFTCGK--DGKVKQWDGEKFEEIQKLDG-HHSEVWCLAVSPNGSFV-VSSSHDKSIRLW  661 (888)
T ss_pred             hhc-ccCceeEEEEcc-cceeEEEecC--cceEEeechhhhhhheeecc-chheeeeeEEcCCCCeE-EeccCCceeEee
Confidence            544 444567788888 7888888754  45676664332222111222 25667899999975555 555665656555


Q ss_pred             ecC
Q psy5751         161 TIR  163 (232)
Q Consensus       161 ~~~  163 (232)
                      ...
T Consensus       662 E~t  664 (888)
T KOG0306|consen  662 ERT  664 (888)
T ss_pred             ecc
Confidence            443

>smart00284 OLF Olfactomedin-like domains

Probab=88.18  E-value=11  Score=29.63  Aligned_cols=148  Identities=15%  Similarity=0.106  Sum_probs=79.6

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE--EEEeCC-----------CCCceEEEEeCCCCeEEEEEc-CCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK--VIVSKD-----------LVNPRGIVVHPYYRKLFWSDW-NRS  109 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~-----------~~~p~~iavd~~~~~ly~~d~-~~~  109 (232)
                      ..-.|-.|.  ++.||+--..+..|.+.|+......  ..+...           ...=-++|+|+ +| |++.-. .+.
T Consensus        74 ~~GtG~VVY--ngslYY~~~~s~~iiKydL~t~~v~~~~~Lp~a~y~~~~~Y~~~~~sdiDlAvDE-~G-LWvIYat~~~  149 (255)
T smart00284       74 GQGTGVVVY--NGSLYFNKFNSHDICRFDLTTETYQKEPLLNGAGYNNRFPYAWGGFSDIDLAVDE-NG-LWVIYATEQN  149 (255)
T ss_pred             cccccEEEE--CceEEEEecCCccEEEEECCCCcEEEEEecCccccccccccccCCCccEEEEEcC-Cc-eEEEEeccCC
Confidence            344566666  5899998888889999999887753  222211           11225899996 45 333221 123


Q ss_pred             CCcEEEEeCCCCCcEEEEE--cCCCCCcc-eEEEeCCCCEEEEEECC---CCcEEE-EecCCCceEEEec----CCCceE
Q psy5751         110 GPKIEWSNLDGTDREIFLK--AADLKLPN-SLAVDFRTDELCWVDAD---SKSLEC-MTIRNRVRRKVYS----NCTYPF  178 (232)
Q Consensus       110 ~~~I~~~~~~g~~~~~~~~--~~~~~~p~-~l~~d~~~~~Ly~~d~~---~~~i~~-~~~~g~~~~~~~~----~~~~p~  178 (232)
                      .+.|..+.++....++.-.  .. ...++ +=+|= -.|.||.+++.   ..+|.. .|..++....+.-    .-..-.
T Consensus       150 ~g~ivvSkLnp~tL~ve~tW~T~-~~k~sa~naFm-vCGvLY~~~s~~~~~~~I~yayDt~t~~~~~~~i~f~n~y~~~s  227 (255)
T smart00284      150 AGKIVISKLNPATLTIENTWITT-YNKRSASNAFM-ICGILYVTRSLGSKGEKVFYAYDTNTGKEGHLDIPFENMYEYIS  227 (255)
T ss_pred             CCCEEEEeeCcccceEEEEEEcC-CCcccccccEE-EeeEEEEEccCCCCCcEEEEEEECCCCccceeeeeeccccccce
Confidence            5778888888766555432  22 22222 11222 24899999863   334443 3444433222211    122222


Q ss_pred             EEEE--ECCEEEEEeCCCCcEEE
Q psy5751         179 GLSI--TDEKYYWTDWKTNRIES  199 (232)
Q Consensus       179 gla~--~~~~ly~td~~~~~i~~  199 (232)
                      .|..  .+..||.  |.++.+..
T Consensus       228 ~l~YNP~d~~LY~--wdng~~l~  248 (255)
T smart00284      228 MLDYNPNDRKLYA--WNNGHLVH  248 (255)
T ss_pred             eceeCCCCCeEEE--EeCCeEEE
Confidence            3444  2678888  44554443

>KOG0270|consensus

Probab=87.84  E-value=15  Score=30.91  Aligned_cols=152  Identities=16%  Similarity=0.127  Sum_probs=88.2

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC---------
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN---------   74 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~---------   74 (232)
                      +++++.....+..+-..++ .|...+++......++...-.....+...+....+..+.+..+++-..|..         
T Consensus       248 ~Ls~n~~~~nVLaSgsaD~-TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w  326 (463)
T KOG0270|consen  248 ALSWNRNFRNVLASGSADK-TVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW  326 (463)
T ss_pred             HHHhccccceeEEecCCCc-eEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceE
Confidence            3445554455555555556 788888886665555554556778888887666666666666666655544         


Q ss_pred             ---CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751          75 ---DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        75 ---g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                         |..-++..  ....++.+.+...+|.+|+.|.+...--++...          ..  -...+||++....-.+..+.
T Consensus       327 k~~g~VEkv~w--~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~----------AH--d~~ISgl~~n~~~p~~l~t~  392 (463)
T KOG0270|consen  327 KFDGEVEKVAW--DPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLK----------AH--DDEISGLSVNIQTPGLLSTA  392 (463)
T ss_pred             EeccceEEEEe--cCCCceeEEEecCCceEEeeecCCCCCceeEEE----------ec--cCCcceEEecCCCCcceeec
Confidence               22222333  233455555555678888888664322222221          11  22456777777666666666


Q ss_pred             CCCCcEEEEecCCCceEEE
Q psy5751         152 ADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus       152 ~~~~~i~~~~~~g~~~~~~  170 (232)
                      +....|...++++...+.+
T Consensus       393 s~d~~Vklw~~~~~~~~~v  411 (463)
T KOG0270|consen  393 STDKVVKLWKFDVDSPKSV  411 (463)
T ss_pred             cccceEEEEeecCCCCccc
Confidence            6666666666665554444

>KOG0645|consensus

Probab=87.74  E-value=12  Score=29.58  Aligned_cols=152  Identities=14%  Similarity=0.070  Sum_probs=89.9

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE--EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--CCC-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV--ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--DDQ-   77 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~--~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--g~~-   77 (232)
                      .++++.+.++.|-.+.+...  +......+...+.+  +...-+...+++....++.| -+-+....+.....+  +.. 
T Consensus        65 RsvAwsp~g~~La~aSFD~t--~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~L-ATCSRDKSVWiWe~deddEfe  141 (312)
T KOG0645|consen   65 RSVAWSPHGRYLASASFDAT--VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYL-ATCSRDKSVWIWEIDEDDEFE  141 (312)
T ss_pred             eeeeecCCCcEEEEeeccce--EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEE-EEeeCCCeEEEEEecCCCcEE
Confidence            46788886665555554433  33333333333322  33345788889998855544 466666777777665  333 


Q ss_pred             CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCCCEEEEEECC-CC
Q psy5751          78 PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRTDELCWVDAD-SK  155 (232)
Q Consensus        78 ~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly~~d~~-~~  155 (232)
                      +..++.++..+...++-+|..+.|+-+... +.-++++... +..=+.+. ....-...-+++|++.+.+|.-++.. +-
T Consensus       142 c~aVL~~HtqDVK~V~WHPt~dlL~S~SYD-nTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv  219 (312)
T KOG0645|consen  142 CIAVLQEHTQDVKHVIWHPTEDLLFSCSYD-NTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTV  219 (312)
T ss_pred             EEeeeccccccccEEEEcCCcceeEEeccC-CeEEEEeecC-CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcce
Confidence            556777888899999999977777766654 2334444433 33322222 12112245688999987788666443 34


Q ss_pred             cEEE
Q psy5751         156 SLEC  159 (232)
Q Consensus       156 ~i~~  159 (232)
                      +|++
T Consensus       220 ~Iw~  223 (312)
T KOG0645|consen  220 SIWR  223 (312)
T ss_pred             Eeee
Confidence            6777

>KOG0641|consensus

Probab=87.60  E-value=11  Score=28.96  Aligned_cols=74  Identities=12%  Similarity=0.127  Sum_probs=54.0

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      .....+++|+ .++|..+......-..+|+.|......+.......+.+.+.|..-+|.-....   .+|...++.|.
T Consensus       232 savaav~vdp-sgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd---~~ikltdlqgd  305 (350)
T KOG0641|consen  232 SAVAAVAVDP-SGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYD---MKIKLTDLQGD  305 (350)
T ss_pred             ceeEEEEECC-CcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEeccc---ceEEEeecccc
Confidence            4567799999 66677788777888889998887666665677788889999855555444433   45877777765

>KOG1407|consensus

Probab=87.11  E-value=13  Score=29.28  Aligned_cols=133  Identities=10%  Similarity=0.128  Sum_probs=74.9

Q ss_pred             CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE
Q psy5751          45 SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE  124 (232)
Q Consensus        45 ~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~  124 (232)
                      ...-++.. ..+.+||...+++.|..+......+..-+.-+..+..-|.++|.++  |++.... .+.+-..+++--.-.
T Consensus       149 e~ne~~w~-~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~Gr--yfA~GsA-DAlvSLWD~~ELiC~  224 (313)
T KOG1407|consen  149 EVNEISWN-NSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGR--YFATGSA-DALVSLWDVDELICE  224 (313)
T ss_pred             eeeeeeec-CCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCc--eEeeccc-cceeeccChhHhhhh
Confidence            33445555 4678999999999999888776555544443445667888999655  3443222 222333333322222


Q ss_pred             EEEEcCCCCCc-ceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEEC
Q psy5751         125 IFLKAADLKLP-NSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITD  184 (232)
Q Consensus       125 ~~~~~~~~~~p-~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~  184 (232)
                      -.+..  +.+| .-|+|+.+ +++.=+-+..+.|-.+....+.+-.-...-...+.+|++-
T Consensus       225 R~isR--ldwpVRTlSFS~d-g~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHP  282 (313)
T KOG1407|consen  225 RCISR--LDWPVRTLSFSHD-GRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHP  282 (313)
T ss_pred             eeecc--ccCceEEEEeccC-cceeeccCccceEEeEecccCCeEEEeeccCCceeEEecC
Confidence            22222  5565 57888887 4444444556677777776554422222223335777763

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=86.99  E-value=15  Score=29.75  Aligned_cols=218  Identities=13%  Similarity=0.030  Sum_probs=118.4

Q ss_pred             EEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccE-EEEeecCCeEEEEeCC----CCeEEEEeCCC
Q psy5751           3 IGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEG-LTFDWVNRVLYWTDSQ----MDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~g-l~~d~~~~~ly~~d~~----~~~I~~~~~~g   75 (232)
                      ++++.++ ....+.++.--.. ...+++..+......+. +.-.+-+| -++...++.||.++..    .+.|-++|...
T Consensus         8 H~~a~~p~~~~avafaRRPG~-~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~   86 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGT-FALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR   86 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCc-EEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence            5677787 4445566655555 68888888665433333 22222222 2456668899988644    57899999984


Q ss_pred             CC-CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC------Cc---------EEEE-eCCCCCcEEEEE--cCCCCCcc
Q psy5751          76 DQ-PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG------PK---------IEWS-NLDGTDREIFLK--AADLKLPN  136 (232)
Q Consensus        76 ~~-~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~------~~---------I~~~-~~~g~~~~~~~~--~~~~~~p~  136 (232)
                      .. +.--+.+..-.|..+.+.|....|-+++.+-..      .+         +..+ ..+|...+....  ......-.
T Consensus        87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiR  166 (305)
T PF07433_consen   87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIR  166 (305)
T ss_pred             CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccccee
Confidence            43 333445677799999999966699998754211      01         1111 112221111111  00012345


Q ss_pred             eEEEeCCCCEEEEEECCCCc-------EEEEecCCCceEEEe-c------CCCceEEEEEE--CCEEEEEeCCCCcEEEE
Q psy5751         137 SLAVDFRTDELCWVDADSKS-------LECMTIRNRVRRKVY-S------NCTYPFGLSIT--DEKYYWTDWKTNRIESA  200 (232)
Q Consensus       137 ~l~~d~~~~~Ly~~d~~~~~-------i~~~~~~g~~~~~~~-~------~~~~p~gla~~--~~~ly~td~~~~~i~~~  200 (232)
                      .|+++.+ +.+++.....+.       +...+.+ ...+.+. .      .-...-+||+.  .+.+.+|-...+++..+
T Consensus       167 HLa~~~~-G~V~~a~Q~qg~~~~~~PLva~~~~g-~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~  244 (305)
T PF07433_consen  167 HLAVDGD-GTVAFAMQYQGDPGDAPPLVALHRRG-GALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVW  244 (305)
T ss_pred             eEEecCC-CcEEEEEecCCCCCccCCeEEEEcCC-CcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEE
Confidence            7788876 677666544321       2222222 2222221 1      11234477875  45788888899999999


Q ss_pred             eCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751         201 NKE-GERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       201 ~~~-g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +.. |.......     ...-.|||...+
T Consensus       245 d~~tg~~~~~~~-----l~D~cGva~~~~  268 (305)
T PF07433_consen  245 DAATGRLLGSVP-----LPDACGVAPTDD  268 (305)
T ss_pred             ECCCCCEeeccc-----cCceeeeeecCC
Confidence            665 44443333     233455555443

>KOG0639|consensus

Probab=86.97  E-value=19  Score=31.09  Aligned_cols=153  Identities=13%  Similarity=0.145  Sum_probs=92.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-eeEEEe----CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVIT----TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~----~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ++++...+.++|-.-   ++.|.+.++.+.. +..+..    ..-+..+...+-+.++.|.+..+ ...+...|+.....
T Consensus       424 AvtIS~~trhVyTgG---kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGe-astlsiWDLAapTp  499 (705)
T KOG0639|consen  424 AVTISNPTRHVYTGG---KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGE-ASTLSIWDLAAPTP  499 (705)
T ss_pred             EEEecCCcceeEecC---CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccc-cceeeeeeccCCCc
Confidence            566666677777322   2256666666432 112211    12356777778887888876655 45677888876654


Q ss_pred             EEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          79 KVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        79 ~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      ++-.+  ........+++.|..+..|-+-.   .+.|...++......--+..- -.....|.|..++-+| |+-.-.+.
T Consensus       500 rikaeltssapaCyALa~spDakvcFsccs---dGnI~vwDLhnq~~VrqfqGh-tDGascIdis~dGtkl-WTGGlDnt  574 (705)
T KOG0639|consen  500 RIKAELTSSAPACYALAISPDAKVCFSCCS---DGNIAVWDLHNQTLVRQFQGH-TDGASCIDISKDGTKL-WTGGLDNT  574 (705)
T ss_pred             chhhhcCCcchhhhhhhcCCccceeeeecc---CCcEEEEEcccceeeecccCC-CCCceeEEecCCCcee-ecCCCccc
Confidence            43332  23345578999996666665443   344888887754433222221 3355678888874454 77677788


Q ss_pred             EEEEecCCC
Q psy5751         157 LECMTIRNR  165 (232)
Q Consensus       157 i~~~~~~g~  165 (232)
                      |.+.|++..
T Consensus       575 vRcWDlreg  583 (705)
T KOG0639|consen  575 VRCWDLREG  583 (705)
T ss_pred             eeehhhhhh
Confidence            999988754

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=86.85  E-value=15  Score=29.71  Aligned_cols=199  Identities=9%  Similarity=0.006  Sum_probs=114.8

Q ss_pred             EEeCCCCEEEEEEcCC--C-CcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCC-----------------
Q psy5751           6 TVDCVEGQVYYSSVAD--K-SSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ-----------------   64 (232)
Q Consensus         6 ~~d~~~~~ly~~d~~~--~-~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~-----------------   64 (232)
                      .|++...+||.+.-.-  . +.|.+.+.. +..+..-+...--.|..|.+.+.++.|.+++.+                 
T Consensus        57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM  136 (305)
T PF07433_consen   57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTM  136 (305)
T ss_pred             EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhc
Confidence            4677777888774322  1 478888888 333322233333489999999877789888744                 


Q ss_pred             CCeEEEEe-CCCCCCEE-EEe--CCCCCceEEEEeCCCCeEEEEEcCCC-----CCcEEEEeCCCCCcEEEEEc-C----
Q psy5751          65 MDTISMAN-LNDDQPKV-IVS--KDLVNPRGIVVHPYYRKLFWSDWNRS-----GPKIEWSNLDGTDREIFLKA-A----  130 (232)
Q Consensus        65 ~~~I~~~~-~~g~~~~~-~~~--~~~~~p~~iavd~~~~~ly~~d~~~~-----~~~I~~~~~~g~~~~~~~~~-~----  130 (232)
                      .-.+..+| .+|..... .+.  ......+-|+++. +|.+.+....+.     .+-+...+.++. .+.+-.. .    
T Consensus       137 ~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~-~G~V~~a~Q~qg~~~~~~PLva~~~~g~~-~~~~~~p~~~~~~  214 (305)
T PF07433_consen  137 QPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDG-DGTVAFAMQYQGDPGDAPPLVALHRRGGA-LRLLPAPEEQWRR  214 (305)
T ss_pred             CCceEEEecCCCceeeeeecCccccccceeeEEecC-CCcEEEEEecCCCCCccCCeEEEEcCCCc-ceeccCChHHHHh
Confidence            12344442 34433222 221  1233567899997 688877754322     222333333322 2221111 0    


Q ss_pred             CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751         131 DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAP  208 (232)
Q Consensus       131 ~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~  208 (232)
                      .-.+--.|+++.+.+.+..+-...+++..++...+.. .-...+....|++...+. |+.-.+.+.+.+....+....
T Consensus       215 l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~-~~~~~l~D~cGva~~~~~-f~~ssG~G~~~~~~~~~~~~~  290 (305)
T PF07433_consen  215 LNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL-LGSVPLPDACGVAPTDDG-FLVSSGQGQLIRLSPDGPQPR  290 (305)
T ss_pred             hCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE-eeccccCceeeeeecCCc-eEEeCCCccEEEccCcccccc
Confidence            1245678999998778888888888888886664432 112245555678876444 444455677888777755443

>PHA02713 hypothetical protein; Provisional

Probab=86.29  E-value=23  Score=31.37  Aligned_cols=191  Identities=9%  Similarity=0.038  Sum_probs=97.6

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCc---cEEEEeecCCeEEEEeCCC------CeEEEEeCCCCCCEEEEeCCCCCce---E
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSP---EGLTFDWVNRVLYWTDSQM------DTISMANLNDDQPKVIVSKDLVNPR---G   91 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p---~gl~~d~~~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~~~~~p~---~   91 (232)
                      .+..++........+ . .+..+   .++++  .++.||+.....      ..++++|+....-..+  ..+..|+   +
T Consensus       273 ~v~~yd~~~~~W~~l-~-~mp~~r~~~~~a~--l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~--~~m~~~R~~~~  346 (557)
T PHA02713        273 CILVYNINTMEYSVI-S-TIPNHIINYASAI--VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVEL--PPMIKNRCRFS  346 (557)
T ss_pred             CEEEEeCCCCeEEEC-C-CCCccccceEEEE--ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeC--CCCcchhhcee
Confidence            355666665443222 2 22222   23444  368899986432      3577777655432211  2333332   4


Q ss_pred             EEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCCCCCcc-eEEEeCCCCEEEEEECC--------------
Q psy5751          92 IVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAADLKLPN-SLAVDFRTDELCWVDAD--------------  153 (232)
Q Consensus        92 iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~~~~p~-~l~~d~~~~~Ly~~d~~--------------  153 (232)
                      +++-  +|.||+.....+   ...+++.++....=..+..   +..|. +.++-..+++||+.=..              
T Consensus       347 ~~~~--~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~---mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~  421 (557)
T PHA02713        347 LAVI--DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPD---MPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNS  421 (557)
T ss_pred             EEEE--CCEEEEECCcCCCCCCceEEEEECCCCeEEECCC---CCcccccccEEEECCEEEEEeCCCccccccccccccc
Confidence            4444  799999864311   2346777766432222111   22221 11111224899987322              


Q ss_pred             ---------CCcEEEEecCCCceEEEecC--CCceEEEEEECCEEEEEeCCC------CcEEEEeCCC-CCcceEEeccC
Q psy5751         154 ---------SKSLECMTIRNRVRRKVYSN--CTYPFGLSITDEKYYWTDWKT------NRIESANKEG-ERAPSIALDMM  215 (232)
Q Consensus       154 ---------~~~i~~~~~~g~~~~~~~~~--~~~p~gla~~~~~ly~td~~~------~~i~~~~~~g-~~~~~i~~~~~  215 (232)
                               ...+++.++....-+.+...  .....++++.+|+||+.-..+      ..+.++++.. ..++.+. +..
T Consensus       422 ~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~-~m~  500 (557)
T PHA02713        422 IDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELIT-TTE  500 (557)
T ss_pred             ccccccccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEcc-ccC
Confidence                     23577888776544433321  122347778899999985432      2467888887 5666442 232


Q ss_pred             CcceeEEEEEE
Q psy5751         216 GTTYMYGIAAV  226 (232)
Q Consensus       216 ~~~~p~gi~~~  226 (232)
                      .+..-.|+++.
T Consensus       501 ~~r~~~~~~~~  511 (557)
T PHA02713        501 SRLSALHTILH  511 (557)
T ss_pred             cccccceeEEE
Confidence            23333555554

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=86.00  E-value=18  Score=29.91  Aligned_cols=105  Identities=10%  Similarity=0.090  Sum_probs=62.0

Q ss_pred             CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCc-
Q psy5751          98 YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTY-  176 (232)
Q Consensus        98 ~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~-  176 (232)
                      ++.+|.+...   +.++..++...... ....  .......+++  ++++|++. ..+.+.+++.+.++..--...+.. 
T Consensus       241 ~~~vy~~~~~---g~l~a~d~~tG~~~-W~~~--~~~~~~p~~~--~~~vyv~~-~~G~l~~~d~~tG~~~W~~~~~~~~  311 (377)
T TIGR03300       241 GGQVYAVSYQ---GRVAALDLRSGRVL-WKRD--ASSYQGPAVD--DNRLYVTD-ADGVVVALDRRSGSELWKNDELKYR  311 (377)
T ss_pred             CCEEEEEEcC---CEEEEEECCCCcEE-Eeec--cCCccCceEe--CCEEEEEC-CCCeEEEEECCCCcEEEccccccCC
Confidence            6889988754   45888887544322 1111  2233444454  47999885 568899999975543211211111 


Q ss_pred             -eEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEe
Q psy5751         177 -PFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIAL  212 (232)
Q Consensus       177 -p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~  212 (232)
                       ....++.+++||+.+. ++.|+.+++. |+....+..
T Consensus       312 ~~ssp~i~g~~l~~~~~-~G~l~~~d~~tG~~~~~~~~  348 (377)
T TIGR03300       312 QLTAPAVVGGYLVVGDF-EGYLHWLSREDGSFVARLKT  348 (377)
T ss_pred             ccccCEEECCEEEEEeC-CCEEEEEECCCCCEEEEEEc
Confidence             1122456888988875 4778888886 555554443

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG0284|consensus

Probab=85.26  E-value=21  Score=29.92  Aligned_cols=155  Identities=10%  Similarity=0.045  Sum_probs=90.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      ..++|.+ ++.-|++-..++ +|...+..-...+.++...-..+..++-.+..+.|+ +-...+.+-..|.....+...+
T Consensus       184 RdlafSp-nDskF~t~SdDg-~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLia-sgskDnlVKlWDprSg~cl~tl  260 (464)
T KOG0284|consen  184 RDLAFSP-NDSKFLTCSDDG-TIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIA-SGSKDNLVKLWDPRSGSCLATL  260 (464)
T ss_pred             heeccCC-CCceeEEecCCC-eEEEEeccCCchhheeccCCCCcceeccCCccceeE-EccCCceeEeecCCCcchhhhh
Confidence            3678888 777788877777 888777664443445555456888888888655554 5555557777887766543333


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      ...-+...++.+.+...+| -+-..  ...+..+++. ...++......-.....++.+|-+..|+.+-...+.|.....
T Consensus       261 h~HKntVl~~~f~~n~N~L-lt~sk--D~~~kv~DiR-~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v  336 (464)
T KOG0284|consen  261 HGHKNTVLAVKFNPNGNWL-LTGSK--DQSCKVFDIR-TMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV  336 (464)
T ss_pred             hhccceEEEEEEcCCCCee-EEccC--CceEEEEehh-HhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEec
Confidence            2344455677777744333 33221  2235555554 222221111112345667777877778777666666666555


Q ss_pred             CC
Q psy5751         163 RN  164 (232)
Q Consensus       163 ~g  164 (232)
                      ..
T Consensus       337 ~~  338 (464)
T KOG0284|consen  337 GL  338 (464)
T ss_pred             cc
Confidence            53

>KOG1407|consensus

Probab=85.11  E-value=17  Score=28.69  Aligned_cols=156  Identities=13%  Similarity=0.116  Sum_probs=90.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee-EE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE-DV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~-~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++++...-+|--.. .++ .+..+.++..... +. ....-.....++.++....++.+-+....|.+.+.....+..
T Consensus        24 ~Sv~wn~~g~~lasgs-~dk-tv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~  101 (313)
T KOG1407|consen   24 HSVAWNCDGTKLASGS-FDK-TVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTA  101 (313)
T ss_pred             eEEEEcccCceeeecc-cCC-ceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEE
Confidence            4667776444443222 223 4555565543221 11 112224567788898888899888888889988877766655


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .++... .-.-++-.|.++++-+.+.   ...|..++..  ..+++.........+-++..- .+.|||...+.++|..+
T Consensus       102 ~i~~~~-eni~i~wsp~g~~~~~~~k---dD~it~id~r--~~~~~~~~~~~~e~ne~~w~~-~nd~Fflt~GlG~v~IL  174 (313)
T KOG1407|consen  102 RIETKG-ENINITWSPDGEYIAVGNK---DDRITFIDAR--TYKIVNEEQFKFEVNEISWNN-SNDLFFLTNGLGCVEIL  174 (313)
T ss_pred             EeeccC-cceEEEEcCCCCEEEEecC---cccEEEEEec--ccceeehhcccceeeeeeecC-CCCEEEEecCCceEEEE
Confidence            554232 2234666665564444432   2234433332  223333332234556777774 47889998999999998


Q ss_pred             ecCCCce
Q psy5751         161 TIRNRVR  167 (232)
Q Consensus       161 ~~~g~~~  167 (232)
                      .+...++
T Consensus       175 sypsLkp  181 (313)
T KOG1407|consen  175 SYPSLKP  181 (313)
T ss_pred             ecccccc
Confidence            8875443

>KOG2111|consensus

Probab=84.87  E-value=19  Score=29.12  Aligned_cols=154  Identities=9%  Similarity=0.108  Sum_probs=90.7

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEE-EeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIV-VHPYYRKLFWSDWNRSGPKIEWSNLDGTD  122 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia-vd~~~~~ly~~d~~~~~~~I~~~~~~g~~  122 (232)
                      ..+.++.++  .++|-+.-.  ++|++++.....+....-+...+|+|++ ++|..+.-+.+--+...++|..+++....
T Consensus        95 ~~I~~V~l~--r~riVvvl~--~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~  170 (346)
T KOG2111|consen   95 SEIKAVKLR--RDRIVVVLE--NKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTK  170 (346)
T ss_pred             cceeeEEEc--CCeEEEEec--CeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcC
Confidence            456667776  355555544  4789888876554443334667798877 55555555555444457889999887766


Q ss_pred             c--EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE-ecC-CCceEEEecCCCc--eEEEEEECCEEEEE-eCCCC
Q psy5751         123 R--EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM-TIR-NRVRRKVYSNCTY--PFGLSITDEKYYWT-DWKTN  195 (232)
Q Consensus       123 ~--~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~-~~~-g~~~~~~~~~~~~--p~gla~~~~~ly~t-d~~~~  195 (232)
                      .  ..++.. ....-..+++..+ |.+.=+-+..|.+.|+ +.. |+....+..+..+  ...+++-.+-.|.+ -+..+
T Consensus       171 ~~~p~~I~A-H~s~Iacv~Ln~~-Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg  248 (346)
T KOG2111|consen  171 PNAPSIINA-HDSDIACVALNLQ-GTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG  248 (346)
T ss_pred             cCCceEEEc-ccCceeEEEEcCC-ccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC
Confidence            5  233322 1455678888887 5555555666655554 443 4455555443333  45777754433333 44556


Q ss_pred             cEEEEeCC
Q psy5751         196 RIESANKE  203 (232)
Q Consensus       196 ~i~~~~~~  203 (232)
                      ++-.|...
T Consensus       249 TlHiF~l~  256 (346)
T KOG2111|consen  249 TLHIFSLR  256 (346)
T ss_pred             eEEEEEee
Confidence            77777654

>KOG0640|consensus

Probab=84.25  E-value=21  Score=28.97  Aligned_cols=112  Identities=14%  Similarity=0.174  Sum_probs=68.1

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG  120 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g  120 (232)
                      ......|.+.+. ..|..+....+.|-..|..-...+..+.  ......+.|.++|.+.+|.+...   .+.+..++.+.
T Consensus       172 ~devn~l~FHPr-e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTd---Hp~~rlYdv~T  247 (430)
T KOG0640|consen  172 VDEVNDLDFHPR-ETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTD---HPTLRLYDVNT  247 (430)
T ss_pred             cCcccceeecch-hheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecC---CCceeEEeccc
Confidence            356778888884 4466677777888888876544222111  23445678999997776666542   34455566554


Q ss_pred             CCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751         121 TDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus       121 ~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      ..  ..++..    .-...+.+-.++ ++.||++-+..+.|...|
T Consensus       248 ~Q--cfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwD  289 (430)
T KOG0640|consen  248 YQ--CFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWD  289 (430)
T ss_pred             ee--EeeecCcccccccceeEEEecC-CccEEEEeccCCcEEeec
Confidence            43  333221    011233444555 489999999999887754

>KOG0275|consensus

Probab=84.04  E-value=21  Score=28.99  Aligned_cols=131  Identities=9%  Similarity=0.045  Sum_probs=69.7

Q ss_pred             cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCC-eEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751          47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYR-KLFWSDWNRSGPKIEWSNLDGTDR  123 (232)
Q Consensus        47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~-~ly~~d~~~~~~~I~~~~~~g~~~  123 (232)
                      +...+...++.|. +-+..+.+.+.+...+.+...+.  ......+.+.+-|.+- .+.+++-   .+.++.+++.|...
T Consensus       352 n~a~ft~dG~~ii-saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNr---sntv~imn~qGQvV  427 (508)
T KOG0275|consen  352 NEATFTDDGHHII-SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNR---SNTVYIMNMQGQVV  427 (508)
T ss_pred             cceEEcCCCCeEE-EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcC---CCeEEEEeccceEE
Confidence            3334444344443 33444566666655554433332  1112234555555442 3333332   35688888888877


Q ss_pred             EEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceE-EEecCCCceEEEEE
Q psy5751         124 EIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR-KVYSNCTYPFGLSI  182 (232)
Q Consensus       124 ~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~-~~~~~~~~p~gla~  182 (232)
                      +.+.+.. +....-..++++.+.++|-. ...+.++|+..-.++.+ ++--.-..+.|++-
T Consensus       428 rsfsSGkREgGdFi~~~lSpkGewiYci-gED~vlYCF~~~sG~LE~tl~VhEkdvIGl~H  487 (508)
T KOG0275|consen  428 RSFSSGKREGGDFINAILSPKGEWIYCI-GEDGVLYCFSVLSGKLERTLPVHEKDVIGLTH  487 (508)
T ss_pred             eeeccCCccCCceEEEEecCCCcEEEEE-ccCcEEEEEEeecCceeeeeeccccccccccc
Confidence            7776553 12334566788988888755 55778899887655443 33222333445543

>PRK10115 protease 2; Provisional

Probab=83.30  E-value=36  Score=31.08  Aligned_cols=199  Identities=6%  Similarity=0.022  Sum_probs=103.1

Q ss_pred             EEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCc-cEEEEeecCCeEEEEeC-----CCCeEEEEeCC
Q psy5751           4 GITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSP-EGLTFDWVNRVLYWTDS-----QMDTISMANLN   74 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p-~gl~~d~~~~~ly~~d~-----~~~~I~~~~~~   74 (232)
                      ++.+.+..+.|.++-...+   ..|+..++.+...   +...+... .+++....++.+|++-.     ....+++.++.
T Consensus       131 ~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~---l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lg  207 (686)
T PRK10115        131 GMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNW---YPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIG  207 (686)
T ss_pred             EEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCC---CCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECC
Confidence            4566666666655533222   2577777764431   11111111 34666555667777632     22578889988


Q ss_pred             CCC--CEEEEeCCCCCce-EEEEeCCCCeEEEEEcCCCCCcEEEEeCC--CCCcEEEEEcCCCCCcceEEEeCCCCEEEE
Q psy5751          75 DDQ--PKVIVSKDLVNPR-GIVVHPYYRKLFWSDWNRSGPKIEWSNLD--GTDREIFLKAADLKLPNSLAVDFRTDELCW  149 (232)
Q Consensus        75 g~~--~~~~~~~~~~~p~-~iavd~~~~~ly~~d~~~~~~~I~~~~~~--g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~  149 (232)
                      ...  .+.++.+...... +.......+.+++.........++....+  ......++... ...-  ..+...++.+|+
T Consensus       208 t~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~ly~  284 (686)
T PRK10115        208 TPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRR-KDHE--YSLDHYQHRFYL  284 (686)
T ss_pred             CChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECC-CCCE--EEEEeCCCEEEE
Confidence            773  4455553222222 22333345666655444344566666532  12223333322 2222  223333477777


Q ss_pred             EECC---CCcEEEEecCCC-ceEEEecC-C-CceEEEEEECCEEEEEeC--CCCcEEEEeCCCCCcc
Q psy5751         150 VDAD---SKSLECMTIRNR-VRRKVYSN-C-TYPFGLSITDEKYYWTDW--KTNRIESANKEGERAP  208 (232)
Q Consensus       150 ~d~~---~~~i~~~~~~g~-~~~~~~~~-~-~~p~gla~~~~~ly~td~--~~~~i~~~~~~g~~~~  208 (232)
                      ....   ..++.++++... +-+.+... . ....+++++.+.|+++..  +..++..++..+....
T Consensus       285 ~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~~~  351 (686)
T PRK10115        285 RSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVI  351 (686)
T ss_pred             EEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCCceE
Confidence            7543   457888887732 22344332 2 345678888888888754  3346677776554433

>KOG0307|consensus

Probab=83.27  E-value=33  Score=32.51  Aligned_cols=161  Identities=14%  Similarity=0.114  Sum_probs=90.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC---CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI---RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~---~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ..+++|+...+.|..+..+++ .|+..+++.....-.. ...   ..+..|+-.-....|+-+-..++++.+.|+..+..
T Consensus       119 V~gLDfN~~q~nlLASGa~~g-eI~iWDlnn~~tP~~~-~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p  196 (1049)
T KOG0307|consen  119 VLGLDFNPFQGNLLASGADDG-EILIWDLNKPETPFTP-GSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP  196 (1049)
T ss_pred             eeeeeccccCCceeeccCCCC-cEEEeccCCcCCCCCC-CCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc
Confidence            458999997776766666666 9999999864321111 122   23333333333346666666678899999888754


Q ss_pred             EEEEeCC--CCCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          79 KVIVSKD--LVNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        79 ~~~~~~~--~~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ..-+...  .-+..+++-+|..-.-.++..+. ....|...++.-..  .+++  ..+-...-+|..-+.+.+|..+-..
T Consensus       197 ii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~--~~H~~GilslsWc~~D~~lllSsgk  274 (1049)
T KOG0307|consen  197 IIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKIL--EGHQRGILSLSWCPQDPRLLLSSGK  274 (1049)
T ss_pred             ccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhh--cccccceeeeccCCCCchhhhcccC
Confidence            3333311  12345778787654444433222 24455555544332  2222  1112344455555555577777777


Q ss_pred             CCcEEEEecCCCc
Q psy5751         154 SKSLECMTIRNRV  166 (232)
Q Consensus       154 ~~~i~~~~~~g~~  166 (232)
                      .++|.+.+.+.++
T Consensus       275 D~~ii~wN~~tgE  287 (1049)
T KOG0307|consen  275 DNRIICWNPNTGE  287 (1049)
T ss_pred             CCCeeEecCCCce
Confidence            8889998887643

>KOG2110|consensus

Probab=83.18  E-value=25  Score=29.07  Aligned_cols=146  Identities=12%  Similarity=0.096  Sum_probs=79.2

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEE-EeecCCeEEE---EeCCCCeEEEEeCCCCCCEEEEeCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLT-FDWVNRVLYW---TDSQMDTISMANLNDDQPKVIVSKDL   86 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~-~d~~~~~ly~---~d~~~~~I~~~~~~g~~~~~~~~~~~   86 (232)
                      .++|.+.-..   .|+..++..-..-..+..-..+|.|+. +.....+=|.   .+...+.|...|.........++-+-
T Consensus        97 r~RLvV~Lee---~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~  173 (391)
T KOG2110|consen   97 RKRLVVCLEE---SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHK  173 (391)
T ss_pred             cceEEEEEcc---cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecC
Confidence            4555553322   577777765332111222223555443 3333333333   34557899999988877776666555


Q ss_pred             CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      .....+|+++ +|.|.-|.+.+ ...|.+.......+.--+-- .....-..|+|+++...|-.+ +.+..|..+.+
T Consensus       174 ~~lAalafs~-~G~llATASeK-GTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~s-S~TeTVHiFKL  247 (391)
T KOG2110|consen  174 GPLAALAFSP-DGTLLATASEK-GTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAAS-SNTETVHIFKL  247 (391)
T ss_pred             CceeEEEECC-CCCEEEEeccC-ceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEe-cCCCeEEEEEe
Confidence            6678899998 78887777653 23344444432221111111 101234678999987766554 44444544444

>KOG0973|consensus

Probab=83.03  E-value=42  Score=31.56  Aligned_cols=148  Identities=10%  Similarity=-0.008  Sum_probs=82.2

Q ss_pred             CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      .-.....++.++ .+.+.++-...+.|...+........++..+...+.|+++||.++ .+-+...  ...|...+...-
T Consensus       128 H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gk-y~ASqsd--Drtikvwrt~dw  203 (942)
T KOG0973|consen  128 HDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGK-YFASQSD--DRTLKVWRTSDW  203 (942)
T ss_pred             CCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecccccccceEECCccC-eeeeecC--CceEEEEEcccc
Confidence            345667777777 566777777788999999888776677777888899999999655 3333322  233443333322


Q ss_pred             CcEEEEEcC-----CCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCC
Q psy5751         122 DREIFLKAA-----DLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWK  193 (232)
Q Consensus       122 ~~~~~~~~~-----~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~  193 (232)
                      ..+..+...     .-....-+..+|++..|-.++..++   .+..++-++-+...-+-+-..|.-++.++-+||=....
T Consensus       204 ~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~  283 (942)
T KOG0973|consen  204 GIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNK  283 (942)
T ss_pred             eeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccc
Confidence            222222222     0122345667777666655544332   33333333333222222333355555555555554443

>KOG0649|consensus

Probab=82.71  E-value=21  Score=27.93  Aligned_cols=77  Identities=6%  Similarity=0.022  Sum_probs=55.8

Q ss_pred             CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      .+..++.+-+|+..+.|+++. +.+.|+.+|++....+..+..+......++....++.++--.   +.+.+...+....
T Consensus       113 evPeINam~ldP~enSi~~Ag-GD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~---EDGtvRvWd~kt~  188 (325)
T KOG0649|consen  113 EVPEINAMWLDPSENSILFAG-GDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGA---EDGTVRVWDTKTQ  188 (325)
T ss_pred             cCCccceeEeccCCCcEEEec-CCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecC---CCccEEEEecccc
Confidence            457889999999999999887 668999999988877777776767777787766677775433   2344555555544


Q ss_pred             C
Q psy5751         122 D  122 (232)
Q Consensus       122 ~  122 (232)
                      .
T Consensus       189 k  189 (325)
T KOG0649|consen  189 K  189 (325)
T ss_pred             c
Confidence            3

>KOG0772|consensus

Probab=81.85  E-value=34  Score=29.75  Aligned_cols=158  Identities=9%  Similarity=0.018  Sum_probs=95.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      ..++++|+..-+++-..+. . .|.-++++|-.     .+.+.......+..+.+...++.|.+.. +.-.+.++|.+|.
T Consensus       170 Vsal~~Dp~GaR~~sGs~D-y-~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs-g~aqakl~DRdG~  246 (641)
T KOG0772|consen  170 VSALAVDPSGARFVSGSLD-Y-TVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS-GSAQAKLLDRDGF  246 (641)
T ss_pred             EEEeeecCCCceeeecccc-c-eEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe-cCcceeEEccCCc
Confidence            4588999977776654444 3 57778888743     2233334556788899988777776554 4457778899987


Q ss_pred             CCEEEEeC------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC---CCCCcceEEEe
Q psy5751          77 QPKVIVSK------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA---DLKLPNSLAVD  141 (232)
Q Consensus        77 ~~~~~~~~------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~---~~~~p~~l~~d  141 (232)
                      .....+..            +......-+-+|.+...|.+-..-+..+||-++-.-...+++....   ---.|...+++
T Consensus       247 ~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~n  326 (641)
T KOG0772|consen  247 EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWN  326 (641)
T ss_pred             eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecC
Confidence            75444431            2222333446777777777765534556665554444555555432   12346677888


Q ss_pred             CCCCEEEEEECCCCcEEEEecC
Q psy5751         142 FRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus       142 ~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      ++ +.++-+--..+.|...+..
T Consensus       327 rd-g~~iAagc~DGSIQ~W~~~  347 (641)
T KOG0772|consen  327 RD-GKLIAAGCLDGSIQIWDKG  347 (641)
T ss_pred             CC-cchhhhcccCCceeeeecC
Confidence            87 4543333345666666654

>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []

Probab=81.83  E-value=23  Score=27.80  Aligned_cols=178  Identities=14%  Similarity=0.033  Sum_probs=95.7

Q ss_pred             CCCCEEEEEEcCCCCcEEEEEc------CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-E-
Q psy5751           9 CVEGQVYYSSVADKSSIKRAHL------DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-V-   80 (232)
Q Consensus         9 ~~~~~ly~~d~~~~~~i~~~~~------~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~-   80 (232)
                      ...+++||++...+..|..+..      .+...+....+....-.|-++.  ++.||+--..+..|.+.|+...... . 
T Consensus        28 ~~~~~iy~~~~~~~~~v~ey~~~~~f~~~~~~~~~~~Lp~~~~GtG~vVY--ngslYY~~~~s~~IvkydL~t~~v~~~~  105 (250)
T PF02191_consen   28 SDSEKIYVTSGFSGNTVYEYRNYEDFLRNGRSSRTYKLPYPWQGTGHVVY--NGSLYYNKYNSRNIVKYDLTTRSVVARR  105 (250)
T ss_pred             CCCCCEEEECccCCCEEEEEcCHhHHhhcCCCceEEEEeceeccCCeEEE--CCcEEEEecCCceEEEEECcCCcEEEEE
Confidence            3467888888765534544331      2222333333333455666676  6889999999999999999987754 2 


Q ss_pred             EEeCC-----------CCCceEEEEeCCCCeEEEEEcC-CCCCcEEEEeCCCCCcEEEEE--cCCCCCcc-eEEEeCCCC
Q psy5751          81 IVSKD-----------LVNPRGIVVHPYYRKLFWSDWN-RSGPKIEWSNLDGTDREIFLK--AADLKLPN-SLAVDFRTD  145 (232)
Q Consensus        81 ~~~~~-----------~~~p~~iavd~~~~~ly~~d~~-~~~~~I~~~~~~g~~~~~~~~--~~~~~~p~-~l~~d~~~~  145 (232)
                      .+...           ...=.++|+|+ +| |++.-.. ...+.|....+|.....+.-.  .. +..+. +=+|=- .|
T Consensus       106 ~L~~A~~~n~~~y~~~~~t~iD~AvDE-~G-LWvIYat~~~~g~ivvskld~~tL~v~~tw~T~-~~k~~~~naFmv-CG  181 (250)
T PF02191_consen  106 ELPGAGYNNRFPYYWSGYTDIDFAVDE-NG-LWVIYATEDNNGNIVVSKLDPETLSVEQTWNTS-YPKRSAGNAFMV-CG  181 (250)
T ss_pred             ECCccccccccceecCCCceEEEEEcC-CC-EEEEEecCCCCCcEEEEeeCcccCceEEEEEec-cCchhhcceeeE-ee
Confidence            12111           11115899995 55 3333221 124568877777665444322  22 22222 112222 48


Q ss_pred             EEEEEECCC---CcEEE-EecCCCceEEEec----CCCceEEEEEE--CCEEEEEeC
Q psy5751         146 ELCWVDADS---KSLEC-MTIRNRVRRKVYS----NCTYPFGLSIT--DEKYYWTDW  192 (232)
Q Consensus       146 ~Ly~~d~~~---~~i~~-~~~~g~~~~~~~~----~~~~p~gla~~--~~~ly~td~  192 (232)
                      .||.+++..   .+|.. +|...++...+.-    .......|...  +..||.=|-
T Consensus       182 vLY~~~s~~~~~~~I~yafDt~t~~~~~~~i~f~~~~~~~~~l~YNP~dk~LY~wd~  238 (250)
T PF02191_consen  182 VLYATDSYDTRDTEIFYAFDTYTGKEEDVSIPFPNPYGNISMLSYNPRDKKLYAWDN  238 (250)
T ss_pred             EEEEEEECCCCCcEEEEEEECCCCceeceeeeeccccCceEeeeECCCCCeEEEEEC
Confidence            999998865   34433 3444333322211    22233344553  778888443

Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding

>KOG2139|consensus

Probab=81.52  E-value=29  Score=28.75  Aligned_cols=189  Identities=13%  Similarity=0.032  Sum_probs=109.8

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEE-cCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAH-LDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~-~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      .+++-...+..+|++.... ...|.. .-+.....++. ++-.....|...+.+..|--+......|...+.+......+
T Consensus       155 elavgCr~gIciW~~s~tl-n~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL  233 (445)
T KOG2139|consen  155 ELAVGCRAGICIWSDSRTL-NANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPL  233 (445)
T ss_pred             eeeeeecceeEEEEcCccc-ccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccc
Confidence            3556667778888876533 222211 11222223333 23344566666665555555556677899999998876666


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEE-EEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIE-WSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~-~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ....+....-+--+|.+..||-+.... ..+++ ....-...+.++.+.    ...+-..++.+.+|.++-++...++++
T Consensus       234 ~~~glgg~slLkwSPdgd~lfaAt~da-vfrlw~e~q~wt~erw~lgsg----rvqtacWspcGsfLLf~~sgsp~lysl  308 (445)
T KOG2139|consen  234 IPKGLGGFSLLKWSPDGDVLFAATCDA-VFRLWQENQSWTKERWILGSG----RVQTACWSPCGSFLLFACSGSPRLYSL  308 (445)
T ss_pred             cccCCCceeeEEEcCCCCEEEEecccc-eeeeehhcccceecceeccCC----ceeeeeecCCCCEEEEEEcCCceEEEE
Confidence            544555555667888777777766442 22333 122222233333222    455667889889999999999999999


Q ss_pred             ecCCCc----------eEEE-ec--------C----CCceEEEEEE--CCEEEEEeCCCCcEE
Q psy5751         161 TIRNRV----------RRKV-YS--------N----CTYPFGLSIT--DEKYYWTDWKTNRIE  198 (232)
Q Consensus       161 ~~~g~~----------~~~~-~~--------~----~~~p~gla~~--~~~ly~td~~~~~i~  198 (232)
                      .+++..          +..+ ++        .    ...+..+|+|  +++|-++--+..+|.
T Consensus       309 ~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~  371 (445)
T KOG2139|consen  309 TFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVL  371 (445)
T ss_pred             eecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhh
Confidence            887531          2112 11        1    3446788886  677777755555443

>COG1770 PtrB Protease II [Amino acid transport and metabolism]

Probab=80.57  E-value=43  Score=30.13  Aligned_cols=205  Identities=10%  Similarity=0.084  Sum_probs=104.9

Q ss_pred             EEEEeCCCCEEEEE-EcCCCCcEEEEEcCCCceeEEEeCCCC-CccEEEEeecCCeEEEEeCCC----CeEEEEeCCC--
Q psy5751           4 GITVDCVEGQVYYS-SVADKSSIKRAHLDGKNVEDVITTNIR-SPEGLTFDWVNRVLYWTDSQM----DTISMANLND--   75 (232)
Q Consensus         4 ~i~~d~~~~~ly~~-d~~~~~~i~~~~~~g~~~~~~~~~~~~-~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~g--   75 (232)
                      +++.++..+.|-|+ |.... +.+.+.+......+.+...+. ...+++....++.+|++-...    .++++..+++  
T Consensus       133 ~~~~s~D~~~la~s~D~~G~-e~y~lr~kdL~tg~~~~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~  211 (682)
T COG1770         133 AASISPDHNLLAYSVDVLGD-EQYTLRFKDLATGEELPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPG  211 (682)
T ss_pred             eeeeCCCCceEEEEEecccc-cEEEEEEEecccccccchhhcccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCC
Confidence            45666766666555 44444 444443332222223333333 356677777788888886442    4788888887  


Q ss_pred             CCCEEEEeCCCC-CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC--CCEEEEEEC
Q psy5751          76 DQPKVIVSKDLV-NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR--TDELCWVDA  152 (232)
Q Consensus        76 ~~~~~~~~~~~~-~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~--~~~Ly~~d~  152 (232)
                      ..-+.+.++... .-.++--...+..|+..-.+.....++..+.+-...+..+-   ...++|+..+.+  ++..|.-..
T Consensus       212 ~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv---~pr~~g~eY~~eh~~d~f~i~sN  288 (682)
T COG1770         212 SSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVV---LPRENGVEYSVEHGGDRFYILSN  288 (682)
T ss_pred             CcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEE---EEcCCCcEEeeeecCcEEEEEec
Confidence            444555553321 11233333335667666555556677777766544322211   124566655443  334444332


Q ss_pred             C---CCcEEEEecCC---CceEEE-ecCCCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceEEe
Q psy5751         153 D---SKSLECMTIRN---RVRRKV-YSNCTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSIAL  212 (232)
Q Consensus       153 ~---~~~i~~~~~~g---~~~~~~-~~~~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i~~  212 (232)
                      .   +-+|.+....-   ..+..+ ........++.++.++|.+-+-..  .+|...+........|.+
T Consensus       289 ~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~i~f  357 (682)
T COG1770         289 ADGKNFKLVRAPVSADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERGIAF  357 (682)
T ss_pred             CCCcceEEEEccCCCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCCceeeEEe
Confidence            2   33677766611   122222 223444567777888888876544  345544443333333444

>KOG0918|consensus

Probab=80.32  E-value=31  Score=29.04  Aligned_cols=102  Identities=12%  Similarity=0.176  Sum_probs=54.1

Q ss_pred             cEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcE
Q psy5751          47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDRE  124 (232)
Q Consensus        47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~  124 (232)
                      ..+-+.-..++||++.--.+-|.++|+.......+                ++++|.-..-.....+....-++  ...+
T Consensus       315 TDilISmDDRFLYvs~WLHGDirQYdIsDP~n~kL----------------tgQi~lGG~i~~~s~vkvl~~e~~~~~~e  378 (476)
T KOG0918|consen  315 TDILISLDDRFLYVSNWLHGDIRQYDISDPKNPKL----------------TGQIFLGGSIQKGSPVKVLEEEGLKKQPE  378 (476)
T ss_pred             heeEEeecCcEEEEEeeeecceeeeccCCCCCcce----------------EEEEEECcEeecCCceEEeccccccCCCc
Confidence            44445555789998888878888888755432222                23333321111111122111111  1111


Q ss_pred             EE-E-EcCCCCCcceEEEeCCCCEEEEEECC---------------CCcEEEEecCC
Q psy5751         125 IF-L-KAADLKLPNSLAVDFRTDELCWVDAD---------------SKSLECMTIRN  164 (232)
Q Consensus       125 ~~-~-~~~~~~~p~~l~~d~~~~~Ly~~d~~---------------~~~i~~~~~~g  164 (232)
                      .+ + .......|.=|-++.++.|||+|.+-               .+++.+++.|.
T Consensus       379 a~~vKGrkl~GGPQMlQLSLDGKRLYVt~SLys~WD~QFYPE~v~~G~~miqidvdt  435 (476)
T KOG0918|consen  379 ALYVKGRKLRGGPQMLQLSLDGKRLYVTNSLYSAWDRQFYPELVSKGSHMIQIDVDT  435 (476)
T ss_pred             cceecCccccCCceeEEeccCCcEEEEEchhhhhhHhhhCHHHHhcCceEEEEeeec
Confidence            11 1 11113568888888889999999652               45777777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	232
1npe_A	267	Crystal Structure Of Nidogen/laminin Complex Length		8e-46
3v65_B	386	Crystal Structure Of Agrin And Lrp4 Complex Length		5e-34
3v64_C	349	Crystal Structure Of Agrin And Lrp4 Length = 349		6e-34
4dg6_A	616	Crystal Structure Of Domains 1 And 2 Of Lrp6 Length		5e-33
3s94_A	619	Crystal Structure Of Lrp6-E1e2 Length = 619		7e-33
3soq_A	318	The Structure Of The First Ywtd Beta Propeller Doma		6e-28
3sob_B	316	The Structure Of The First Ywtd Beta Propeller Doma		7e-28
3s2k_A	629	Structural Basis Of Wnt Signaling Inhibition By Dic		5e-27
4a0p_A	628	Crystal Structure Of Lrp6p3e3p4e4 Length = 628		5e-27
3s8v_A	623	Crystal Structure Of Lrp6-Dkk1 Complex Length = 623		5e-27
1n7d_A	699	Extracellular Domain Of The Ldl Receptor Length = 6		5e-23
1ijq_A	316	Crystal Structure Of The Ldl Receptor Ywtd-Egf Doma		1e-22
3p5b_L	400	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		2e-22
3p5c_L	440	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		4e-22
3m0c_C	791	The X-Ray Crystal Structure Of Pcsk9 In Complex Wit		1e-21

>pdb|1NPE|A Chain A, Crystal Structure Of Nidogen/laminin Complex Length = 267

Iteration: 1
 Score =  179 bits (455), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 135/234 (57%), Gaps = 9/234 (3%)
Query: 1   MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
           ++IG+  DCV+  VY++ +++  SI RA L G     +I  ++ SPEG+  D + R ++W
Sbjct: 37  VIIGLAFDCVDKVVYWTDISE-PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFW 95
Query: 61  TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
           TDSQ+D I +A ++  Q +V+    LVNPRGIV  P    L+W+DWNR  PKIE S++DG
Sbjct: 96  TDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155
Query: 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL 180
           T+R I L   +L LPN L  D  + +LCWVDA +   EC+      RRKV     YPF +
Sbjct: 156 TNRRI-LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAV 214
Query: 181 SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMG---TTYMYGIAAVPSSCP 231
           +   +  Y+TDWKTN + +     + A S  +D       T +YGI    S CP
Sbjct: 215 TSYGKNLYYTDWKTNSVIAM----DLAISKEMDTFHPHKQTRLYGITIALSQCP 264

>pdb|3V65|B Chain B, Crystal Structure Of Agrin And Lrp4 Complex Length = 386

Iteration: 1
 Score =  140 bits (353), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 112/192 (58%), Gaps = 8/192 (4%)
Query: 14  VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73
           V++S V     I RA+L+G NVE+V++T + SP GL  DWV+  LYWTDS    I +ANL
Sbjct: 130 VFWSDVT-LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL 188
Query: 74  NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK 133
           +    KV++ + L  PR I +HP    ++W+DW  + P+IE S++DG+ R I    AD  
Sbjct: 189 DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDGSGRRII---ADTH 244
Query: 134 L--PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-CTYPFGLSITDEKYYWT 190
           L  PN L +D+    + WVDA    +E   +    R+ V S    +PF +++ ++  YWT
Sbjct: 245 LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWT 304
Query: 191 DWKTNRIESANK 202
           DW T  I SANK
Sbjct: 305 DWHTKSINSANK 316

>pdb|3V64|C Chain C, Crystal Structure Of Agrin And Lrp4 Length = 349

Iteration: 1
 Score =  140 bits (353), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 112/192 (58%), Gaps = 8/192 (4%)
Query: 14  VYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73
           V++S V     I RA+L+G NVE+V++T + SP GL  DWV+  LYWTDS    I +ANL
Sbjct: 87  VFWSDVT-LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANL 145
Query: 74  NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK 133
           +    KV++ + L  PR I +HP    ++W+DW  + P+IE S++DG+ R I    AD  
Sbjct: 146 DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDGSGRRII---ADTH 201
Query: 134 L--PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-CTYPFGLSITDEKYYWT 190
           L  PN L +D+    + WVDA    +E   +    R+ V S    +PF +++ ++  YWT
Sbjct: 202 LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWT 261
Query: 191 DWKTNRIESANK 202
           DW T  I SANK
Sbjct: 262 DWHTKSINSANK 273

>pdb|4DG6|A Chain A, Crystal Structure Of Domains 1 And 2 Of Lrp6 Length = 616

Iteration: 1
 Score =  137 bits (345), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 7/218 (3%)
Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           I I  D VEG +Y++   +  +I+R+ +DG   + V+T  I  P+G+  DWV R LYWTD
Sbjct: 344 IAIDYDPVEGYIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTD 402
Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           +  D I +  LN    K+++S+DL  PR IV+ P    ++W+DW    PKIE + LDG+D
Sbjct: 403 TGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI-PKIERAALDGSD 461
Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR-KVYSNCTYPFGLS 181
           R + +  + L  PN LA+D+   ++ W DA +  +E M      RR  V     + FG +
Sbjct: 462 RVVLVNTS-LGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFT 520
Query: 182 ITDEKYYWTDWKTNRIESANKE-GERAPSI--ALDMMG 216
           +  +  YWTDW+   IE  +K   ER   I    D+MG
Sbjct: 521 LLGDYVYWTDWQRRSIERVHKRSAEREVIIDQLPDLMG 558

>pdb|3S94|A Chain A, Crystal Structure Of Lrp6-E1e2 Length = 619

Iteration: 1
 Score =  137 bits (344), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 7/218 (3%)
Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           I I  D VEG +Y++   +  +I+R+ +DG   + V+T  I  P+G+  DWV R LYWTD
Sbjct: 352 IAIDYDPVEGYIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTD 410
Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           +  D I +  LN    K+++S+DL  PR IV+ P    ++W+DW    PKIE + LDG+D
Sbjct: 411 TGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI-PKIERAALDGSD 469
Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR-KVYSNCTYPFGLS 181
           R + +  + L  PN LA+D+   ++ W DA +  +E M      RR  V     + FG +
Sbjct: 470 RVVLVNTS-LGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFT 528
Query: 182 ITDEKYYWTDWKTNRIESANKE-GERAPSI--ALDMMG 216
           +  +  YWTDW+   IE  +K   ER   I    D+MG
Sbjct: 529 LLGDYVYWTDWQRRSIERVHKRSAEREVIIDQLPDLMG 566

>pdb|3SOQ|A Chain A, The Structure Of The First Ywtd Beta Propeller Domain Of Lrp6 In Complex With A Dkk1 Peptide Length = 318

Iteration: 1
 Score =  120 bits (301), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 6/208 (2%)
Query: 11  EGQVYYSSVADKSSIKRAHLDG-KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTIS 69
            G +Y+S V++++ IKR   +  ++V++V+ + + SP+GL  DW+   LYWTDS+ + I 
Sbjct: 46  HGLIYWSDVSEEA-IKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE 104
Query: 70  MANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA 129
           ++NL+    KV+  ++L  PR I + P    ++W+DW    PKIE + +DG+ R I +  
Sbjct: 105 VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PKIERAGMDGSSRFIIIN- 162
Query: 130 ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY-SNCTYPFGLSITDEKYY 188
           +++  PN L +D+   +L W DA    +    +    R+ V   +  +PF L++ ++  Y
Sbjct: 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILY 222
Query: 189 WTDWKTNRIESANK-EGERAPSIALDMM 215
           WTDW T+ I + NK  GE    I  D+ 
Sbjct: 223 WTDWSTHSILACNKYTGEGLREIHSDIF 250

>pdb|3SOB|B Chain B, The Structure Of The First Ywtd Beta Propeller Domain Of Lrp6 In Complex With A Fab Length = 316

Iteration: 1
 Score =  120 bits (301), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 6/208 (2%)
Query: 11  EGQVYYSSVADKSSIKRAHLDG-KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTIS 69
            G +Y+S V++++ IKR   +  ++V++V+ + + SP+GL  DW+   LYWTDS+ + I 
Sbjct: 43  HGLIYWSDVSEEA-IKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE 101
Query: 70  MANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA 129
           ++NL+    KV+  ++L  PR I + P    ++W+DW    PKIE + +DG+ R I +  
Sbjct: 102 VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PKIERAGMDGSSRFIIIN- 159
Query: 130 ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY-SNCTYPFGLSITDEKYY 188
           +++  PN L +D+   +L W DA    +    +    R+ V   +  +PF L++ ++  Y
Sbjct: 160 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILY 219
Query: 189 WTDWKTNRIESANK-EGERAPSIALDMM 215
           WTDW T+ I + NK  GE    I  D+ 
Sbjct: 220 WTDWSTHSILACNKYTGEGLREIHSDIF 247

>pdb|3S2K|A Chain A, Structural Basis Of Wnt Signaling Inhibition By Dickkopf Binding To Lrp56. Length = 629

Iteration: 1
 Score =  117 bits (293), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 108/199 (54%), Gaps = 4/199 (2%)
Query: 4   GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS 63
            +  D  + ++Y++ ++ K+ I RA ++G  +E V+   +  PEG+  DW+ + LYW D+
Sbjct: 39  ALDFDVTDNRIYWTDISLKT-ISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT 97
Query: 64  QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123
             + I ++ L+    +V+V KDL +PR + + P    ++W++W    PKI+ + +DG++R
Sbjct: 98  GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSER 156
Query: 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT 183
              +   ++   N L +D+    L W D D+  +E   +    R  +  +  +PFGL+  
Sbjct: 157 TTLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQY 214
Query: 184 DEKYYWTDWKTNRIESANK 202
            +  YWTDW    IE ANK
Sbjct: 215 QDYIYWTDWSRRSIERANK 233

>pdb|4A0P|A Chain A, Crystal Structure Of Lrp6p3e3p4e4 Length = 628

Iteration: 1
 Score =  117 bits (293), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 108/199 (54%), Gaps = 4/199 (2%)
Query: 4   GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS 63
            +  D  + ++Y++ ++ K+ I RA ++G  +E V+   +  PEG+  DW+ + LYW D+
Sbjct: 41  ALDFDVTDNRIYWTDISLKT-ISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT 99
Query: 64  QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123
             + I ++ L+    +V+V KDL +PR + + P    ++W++W    PKI+ + +DG++R
Sbjct: 100 GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSER 158
Query: 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT 183
              +   ++   N L +D+    L W D D+  +E   +    R  +  +  +PFGL+  
Sbjct: 159 TTLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQY 216
Query: 184 DEKYYWTDWKTNRIESANK 202
            +  YWTDW    IE ANK
Sbjct: 217 QDYIYWTDWSRRSIERANK 235

>pdb|3S8V|A Chain A, Crystal Structure Of Lrp6-Dkk1 Complex Length = 623

Iteration: 1
 Score =  117 bits (293), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 108/199 (54%), Gaps = 4/199 (2%)
Query: 4   GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS 63
            +  D  + ++Y++ ++ K+ I RA ++G  +E V+   +  PEG+  DW+ + LYW D+
Sbjct: 46  ALDFDVTDNRIYWTDISLKT-ISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT 104
Query: 64  QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123
             + I ++ L+    +V+V KDL +PR + + P    ++W++W    PKI+ + +DG++R
Sbjct: 105 GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSER 163
Query: 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT 183
              +   ++   N L +D+    L W D D+  +E   +    R  +  +  +PFGL+  
Sbjct: 164 TTLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQY 221
Query: 184 DEKYYWTDWKTNRIESANK 202
            +  YWTDW    IE ANK
Sbjct: 222 QDYIYWTDWSRRSIERANK 240

>pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor Length = 699

Iteration: 1
 Score =  104 bits (259), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 115/209 (55%), Gaps = 12/209 (5%)
Query: 2   LIGITVDCVEGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRV 57
           ++ +  +    ++Y+S ++ +    + + RAH    + + VI+ +I++P+GL  DW++  
Sbjct: 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAH-GVSSYDTVISRDIQAPDGLAVDWIHSN 466
Query: 58  LYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117
           +YWTDS + T+S+A+    + K +  +    PR IVV P +  ++W+DW  +  KI+   
Sbjct: 467 IYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGG 525
Query: 118 LDGTDREIF-LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--- 173
           L+G D  I+ L   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +   
Sbjct: 526 LNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 583
Query: 174 CTYPFGLSITDEKYYWTDWKTNRIESANK 202
             +PF L++ ++K +WTD     I SAN+
Sbjct: 584 LAHPFSLAVFEDKVFWTDIINEAIFSANR 612

>pdb|1IJQ|A Chain A, Crystal Structure Of The Ldl Receptor Ywtd-Egf Domain Pair Length = 316

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 2   LIGITVDCVEGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRV 57
           ++ +  +    ++Y+S ++ +    + + RAH    + + VI+ +I++P+GL  DW++  
Sbjct: 32  VVALDTEVASNRIYWSDLSQRMICSTQLDRAH-GVSSYDTVISRDIQAPDGLAVDWIHSN 90
Query: 58  LYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117
           +YWTDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW  +  KI+   
Sbjct: 91  IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGG 149
Query: 118 LDGTDREIF-LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--- 173
           L+G D  I+ L   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +   
Sbjct: 150 LNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 207
Query: 174 CTYPFGLSITDEKYYWTDWKTNRIESANK 202
             +PF L++ ++K +WTD     I SAN+
Sbjct: 208 LAHPFSLAVFEDKVFWTDIINEAIFSANR 236

>pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 400

Iteration: 1
 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 2   LIGITVDCVEGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRV 57
           ++ +  +    ++Y+S ++ +    + + RAH    + + VI+ +I++P+GL  DW++  
Sbjct: 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAH-GVSSYDTVISRDIQAPDGLAVDWIHSN 172
Query: 58  LYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117
           +YWTDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW  +  KI+   
Sbjct: 173 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGG 231
Query: 118 LDGTDREIF-LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--- 173
           L+G D  I+ L   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +   
Sbjct: 232 LNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 289
Query: 174 CTYPFGLSITDEKYYWTDWKTNRIESANK 202
             +PF L++ ++K +WTD     I SAN+
Sbjct: 290 LAHPFSLAVFEDKVFWTDIINEAIFSANR 318

>pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 440

Iteration: 1
 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 2   LIGITVDCVEGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRV 57
           ++ +  +    ++Y+S ++ +    + + RAH    + + VI+ +I++P+GL  DW++  
Sbjct: 154 VVALDTEVASNRIYWSDLSQRMICSTQLDRAH-GVSSYDTVISRDIQAPDGLAVDWIHSN 212
Query: 58  LYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117
           +YWTDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW  +  KI+   
Sbjct: 213 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGG 271
Query: 118 LDGTDREIF-LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--- 173
           L+G D  I+ L   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +   
Sbjct: 272 LNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 329
Query: 174 CTYPFGLSITDEKYYWTDWKTNRIESANK 202
             +PF L++ ++K +WTD     I SAN+
Sbjct: 330 LAHPFSLAVFEDKVFWTDIINEAIFSANR 358

>pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The Ldl Receptor Length = 791

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 2   LIGITVDCVEGQVYYSSVADK----SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRV 57
           ++ +  +    ++Y+S ++ +    + + RAH    + + VI+ +I++P+GL  DW++  
Sbjct: 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAH-GVSSYDTVISRDIQAPDGLAVDWIHSN 484
Query: 58  LYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN 117
           +YWTDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW  +  KI+   
Sbjct: 485 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGG 543
Query: 118 LDGTDREIF-LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--- 173
           L+G D  I+ L   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +   
Sbjct: 544 LNGVD--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 601
Query: 174 CTYPFGLSITDEKYYWTDWKTNRIESANK 202
             +PF L++ ++K +WTD     I SAN+
Sbjct: 602 LAHPFSLAVFEDKVFWTDIINEAIFSANR 630

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	232
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	9e-78
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	3e-37
3v65_B	386	Low-density lipoprotein receptor-related protein;	5e-66
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	2e-63
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	1e-23
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	6e-08
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	2e-63
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	1e-09
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	2e-62
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	2e-09
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	2e-60
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	4e-33
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	2e-10
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	2e-59
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	9e-33
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	2e-10
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	8e-58
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	4e-52
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	4e-29
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	5e-29
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	7e-12
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	5e-57
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	6e-26
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	2e-08
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	8e-57
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	2e-56
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	9e-34
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	5e-28
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	6e-09
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	3e-17
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	9e-10
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	5e-05
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	7e-04
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	7e-04

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 Length = 267

 Score =  234 bits (598), Expect = 9e-78
 Identities = 90/229 (39%), Positives = 130/229 (56%), Gaps = 3/229 (1%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           IG+  DCV+  VY++ +++ S I RA L G     +I  ++ SPEG+  D + R ++WTD
Sbjct: 39  IGLAFDCVDKVVYWTDISEPS-IGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD 97

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           SQ+D I +A ++  Q +V+    LVNPRGIV  P    L+W+DWNR  PKIE S++DGT+
Sbjct: 98  SQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157

Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI 182
           R I  +  +L LPN L  D  + +LCWVDA +   EC+      RRKV     YPF ++ 
Sbjct: 158 RRILAQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS 216

Query: 183 TDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
             +  Y+TDWKTN + + +    +           T +YGI    S CP
Sbjct: 217 YGKNLYYTDWKTNSVIAMDLAISKEMDTFHP-HKQTRLYGITIALSQCP 264

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 Length = 267

 Score =  130 bits (328), Expect = 3e-37
 Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 16/216 (7%)

Query: 19  VADKSSIKRAHLDGKNVED-----VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73
            A    I+R  L+   ++       +    +   GL FD V++V+YWTD    +I  A+L
Sbjct: 6   FAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASL 65

Query: 74  NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK 133
           +  +P  I+ +DL +P GI +    R +FW+D      +IE + +DGT R + L    L 
Sbjct: 66  HGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLD--RIEVAKMDGTQRRV-LFDTGLV 122

Query: 134 LPNSLAVDFRTDELCWVD--ADSKSLECMTIRNRVRRK-VYSNCTYPFGLSI--TDEKYY 188
            P  +  D     L W D   D+  +E   +    RR     N   P GL+      +  
Sbjct: 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLC 182

Query: 189 WTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIA 224
           W D  T+R E  N      P     + G  Y + + 
Sbjct: 183 WVDAGTHRAECLNPAQ---PGRRKVLEGLQYPFAVT 215

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score =  208 bits (529), Expect = 5e-66
 Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 4/232 (1%)

Query: 1   MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             I +        V++S V     I RA+L+G NVE+V++T + SP GL  DWV+  LYW
Sbjct: 117 NAIALDFHHRRELVFWSDVTLDR-ILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 175

Query: 61  TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
           TDS    I +ANL+    KV++ + L  PR I +HP    ++W+DW  + P+IE S++DG
Sbjct: 176 TDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDG 234

Query: 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-CTYPFG 179
           + R I      L  PN L +D+    + WVDA    +E   +    R+ V S    +PF 
Sbjct: 235 SGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFA 293

Query: 180 LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
           +++ ++  YWTDW T  I SANK   +   I  + +                
Sbjct: 294 ITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPA 345

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Length = 791

 Score =  209 bits (533), Expect = 2e-63
 Identities = 57/234 (24%), Positives = 117/234 (50%), Gaps = 11/234 (4%)

Query: 5   ITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNRVLYW 60
           +  +    ++Y+S ++ +  I    LD  +     + VI+ +I++P+GL  DW++  +YW
Sbjct: 429 LDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYW 487

Query: 61  TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
           TDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW     KI+   L+G
Sbjct: 488 TDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNG 546

Query: 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN---CTYP 177
            D    +   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +     +P
Sbjct: 547 VDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHP 605

Query: 178 FGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
           F L++ ++K +WTD     I SAN+      ++  + + +     +     + P
Sbjct: 606 FSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSP-EDMVLFHNLTQP 658

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Length = 791

 Score = 98.0 bits (243), Expect = 1e-23
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 4   GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS 63
            I VD V G +Y++     + IK+  L+G ++  ++T NI+ P G+T D ++  LYW DS
Sbjct: 518 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 577

Query: 64  QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN-LDGTD 122
           ++ +IS  ++N    K I+  +        +  +  K+FW+D       I  +N L G+D
Sbjct: 578 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN--EAIFSANRLTGSD 635

Query: 123 REIFLKAADLKLPNSLAV 140
             +  +  +L  P  + +
Sbjct: 636 VNLLAE--NLLSPEDMVL 651

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Length = 791

 Score = 51.8 bits (123), Expect = 6e-08
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 59  YWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL 118
           Y   +    +    L+  +   ++     N   +       +++WSD   S   I  + L
Sbjct: 397 YLFFTNRHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDL--SQRMICSTQL 453

Query: 119 DGTDREIFLK---AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNC- 174
           D            + D++ P+ LAVD+    + W D+   ++     +   R+ ++    
Sbjct: 454 DRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG 513

Query: 175 TYPFGLSI--TDEKYYWTDWKTN-RIESANKEG 204
           + P  + +       YWTDW T  +I+     G
Sbjct: 514 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699

 Score =  208 bits (530), Expect = 2e-63
 Identities = 57/236 (24%), Positives = 117/236 (49%), Gaps = 11/236 (4%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNRVL 58
           + +  +    ++Y+S ++ +  I    LD  +     + VI+ +I++P+GL  DW++  +
Sbjct: 409 VALDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNI 467

Query: 59  YWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL 118
           YWTDS + T+S+A+    + K +  +    PR IVV P +  ++W+DW     KI+   L
Sbjct: 468 YWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGL 526

Query: 119 DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN---CT 175
           +G D    +   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +     
Sbjct: 527 NGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 585

Query: 176 YPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
           +PF L++ ++K +WTD     I SAN+      ++  + + +     +     + P
Sbjct: 586 HPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSP-EDMVLFHQLTQP 640

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699

 Score = 56.7 bits (136), Expect = 1e-09
 Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 4   GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS 63
           GIT+D + G++Y+   +   SI    ++G N + ++    R     +       ++WTD 
Sbjct: 544 GITLDLLSGRLYWVD-SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 602

Query: 64  QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDW 106
             + I  AN        +++++L++P  +V+     +    +W
Sbjct: 603 INEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQPRGVNW 645

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score =  199 bits (506), Expect = 2e-62
 Identities = 57/239 (23%), Positives = 119/239 (49%), Gaps = 10/239 (4%)

Query: 1   MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNR 56
            ++ +  +    ++Y+S ++ +  I    LD  +     + VI+ +I++P+GL  DW++ 
Sbjct: 113 NVVALDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 171

Query: 57  VLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS 116
            +YWTDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW     KI+  
Sbjct: 172 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKG 230

Query: 117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--- 173
            L+G D    +   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +   
Sbjct: 231 GLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR 289

Query: 174 CTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCPG 232
             +PF L++ ++K +WTD     I SAN+      ++  + + +     +    +   G
Sbjct: 290 LAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRG 348

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 56.0 bits (134), Expect = 2e-09
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 9/153 (5%)

Query: 59  YWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL 118
            +              D      +  +L N   +       +++WSD   S   I  + L
Sbjct: 84  AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL--SQRMICSTQL 141

Query: 119 DGTDREIFLKA---ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NC 174
           D              D++ P+ LAVD+    + W D+   ++     +   R+ ++  N 
Sbjct: 142 DRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG 201

Query: 175 TYPFGLSI--TDEKYYWTDWKTN-RIESANKEG 204
           + P  + +       YWTDW T  +I+     G
Sbjct: 202 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score =  191 bits (487), Expect = 2e-60
 Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 6/231 (2%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVITTNIRSPEGLTFDWVNRVLYWT 61
             +      G +Y+S V++++ IKR   +    V++V+ + + SP+GL  DW+   LYWT
Sbjct: 38  AAVDFVFSHGLIYWSDVSEEA-IKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWT 96

Query: 62  DSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121
           DS+ + I ++NL+    KV+  ++L  PR I + P    ++W+DW    PKIE + +DG+
Sbjct: 97  DSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PKIERAGMDGS 155

Query: 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRK-VYSNCTYPFGL 180
            R I +  +++  PN L +D+   +L W DA    +    +    R+  V  +  +PF L
Sbjct: 156 SRFIIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFAL 214

Query: 181 SITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
           ++ ++  YWTDW T+ I + NK            +  + M   A      P
Sbjct: 215 TLFEDILYWTDWSTHSILACNKYTGEGLREIHSDI-FSPMDIHAFSQQRQP 264

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score =  120 bits (303), Expect = 4e-33
 Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 19  VADKSSIKRAHL-DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-D 76
            A++  ++     +GK    ++   +     + F + + ++YW+D   + I     N  +
Sbjct: 9   YANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE 68

Query: 77  QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPN 136
             + +V   L++P G+       KL+W+D   +  +IE SNLDG+ R++ L   +L  P 
Sbjct: 69  SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETN--RIEVSNLDGSLRKV-LFWQELDQPR 125

Query: 137 SLAVDFRTDELCWVDA-DSKSLECMTIRNRVRRK-VYSNCTYPFGLSI--TDEKYYWTDW 192
           ++A+D  +  + W D  +   +E   +    R   + S   +P GL++   ++K YW D 
Sbjct: 126 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA 185

Query: 193 KTNRIESANKEG 204
           K N I  +N +G
Sbjct: 186 KLNFIHKSNLDG 197

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B Length = 318

 Score = 58.5 bits (141), Expect = 2e-10
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
            G+T+D  E ++Y++  A  + I +++LDG N + V+  ++  P  LT      +LYWTD
Sbjct: 169 NGLTLDYEEQKLYWA-DAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTD 225

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWN 107
               +I   N    +    +  D+ +P  I      R+   ++  
Sbjct: 226 WSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPC 270

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 Length = 316

 Score =  189 bits (480), Expect = 2e-59
 Identities = 56/207 (27%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNRVL 58
           + +  +    ++Y+S ++ +  I    LD  +     + VI+ +I++P+GL  DW++  +
Sbjct: 33  VALDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNI 91

Query: 59  YWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL 118
           YWTDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW     KI+   L
Sbjct: 92  YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGL 150

Query: 119 DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCT--- 175
           +G D    +   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +     
Sbjct: 151 NGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 209

Query: 176 YPFGLSITDEKYYWTDWKTNRIESANK 202
           +PF L++ ++K +WTD     I SAN+
Sbjct: 210 HPFSLAVFEDKVFWTDIINEAIFSANR 236

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 Length = 316

 Score =  119 bits (300), Expect = 9e-33
 Identities = 39/214 (18%), Positives = 86/214 (40%), Gaps = 12/214 (5%)

Query: 19  VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-- 76
             ++  +++  LD      +I  N+R+   L  +  +  +YW+D     I    L+    
Sbjct: 6   FTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 64

Query: 77  --QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKL 134
                 ++S+D+  P G+ V   +  ++W+D       +  ++  G  R+   +  +   
Sbjct: 65  VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFR-ENGSK 121

Query: 135 PNSLAVDFRTDELCWVDADSKS-LECMTIRNRVRRK-VYSNCTYPFGLSI--TDEKYYWT 190
           P ++ VD     + W D  + + ++   +        V  N  +P G+++     + YW 
Sbjct: 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 181

Query: 191 DWKTNRIESANKEGERAPSIALDMMGTTYMYGIA 224
           D K + I S +  G    +I  D     + + +A
Sbjct: 182 DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA 215

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 Length = 316

 Score = 58.5 bits (141), Expect = 2e-10
 Identities = 21/104 (20%), Positives = 47/104 (45%), Gaps = 1/104 (0%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
            GIT+D + G++Y+   +   SI    ++G N + ++    R     +       ++WTD
Sbjct: 167 NGITLDLLSGRLYWVD-SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 225

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDW 106
              + I  AN        +++++L++P  +V+     +    +W
Sbjct: 226 IINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNW 269

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score =  192 bits (488), Expect = 8e-58
 Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 4/222 (1%)

Query: 1   MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYW 60
             I I  D VEG +Y++    ++ I+R+ +DG   + V+T  I  P+G+  DWV R LYW
Sbjct: 350 HAIAIDYDPVEGYIYWTDDEVRA-IRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYW 408

Query: 61  TDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG 120
           TD+  D I +  LN    K+++S+DL  PR IV+ P    ++W+DW    PKIE + LDG
Sbjct: 409 TDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI-PKIERAALDG 467

Query: 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-CTYPFG 179
           +DR + +    L  PN LA+D+   ++ W DA +  +E M      RR +  +   + FG
Sbjct: 468 SDRVVLVN-TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFG 526

Query: 180 LSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMY 221
            ++  +  YWTDW+   IE  +K       I   +     + 
Sbjct: 527 FTLLGDYVYWTDWQRRSIERVHKRSAEREVIIDQLPDLMGLK 568

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score =  176 bits (448), Expect = 4e-52
 Identities = 64/204 (31%), Positives = 112/204 (54%), Gaps = 5/204 (2%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVITTNIRSPEGLTFDWVNRVLYWT 61
             +      G +Y+S V++++ IKR   +    V++V+ + + SP+GL  DW+   LYWT
Sbjct: 43  AAVDFVFSHGLIYWSDVSEEA-IKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWT 101

Query: 62  DSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121
           DS+ + I ++NL+    KV+  ++L  PR I + P    ++W+DW    PKIE + +DG+
Sbjct: 102 DSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PKIERAGMDGS 160

Query: 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRK-VYSNCTYPFGL 180
            R I +  +++  PN L +D+   +L W DA    +    +    R+  V  +  +PF L
Sbjct: 161 SRFIIIN-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFAL 219

Query: 181 SITDEKYYWTDWKTNRIESANKEG 204
           ++ ++  YWTDW T+ I + NK  
Sbjct: 220 TLFEDILYWTDWSTHSILACNKYT 243

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score =  113 bits (283), Expect = 4e-29
 Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 9/202 (4%)

Query: 9   CVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMD 66
           C +G      +A ++ ++R  LD  +  D++    +IR    + +D V   +YWTD ++ 
Sbjct: 312 CKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVR 371

Query: 67  TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF 126
            I  + ++    + +V+  + +P GI V    R L+W+D      +IE + L+GT R+I 
Sbjct: 372 AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTD--RIEVTRLNGTMRKIL 429

Query: 127 LKAADLKLPNSLAVDFRTDELCWVDA-DSKSLECMTIRNRVRRK-VYSNCTYPFGLSI-- 182
           +   DL+ P ++ +D     + W D  +   +E   +    R   V ++  +P GL++  
Sbjct: 430 IS-EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDY 488

Query: 183 TDEKYYWTDWKTNRIESANKEG 204
            + K YW D KT++IE  N +G
Sbjct: 489 DEGKIYWGDAKTDKIEVMNTDG 510

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score =  113 bits (283), Expect = 5e-29
 Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 9/192 (4%)

Query: 19  VADKSSIKRAHL-DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-D 76
            A++  ++     +GK    ++   +     + F + + ++YW+D   + I     N  +
Sbjct: 14  YANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE 73

Query: 77  QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPN 136
             + +V   L++P G+       KL+W+D   +  +IE SNLDG+ R++ L   +L  P 
Sbjct: 74  SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETN--RIEVSNLDGSLRKV-LFWQELDQPR 130

Query: 137 SLAVDFRTDELCWVDA-DSKSLECMTIRNRVRRK-VYSNCTYPFGLSI--TDEKYYWTDW 192
           ++A+D  +  + W D  +   +E   +    R   + S   +P GL++   ++K YW D 
Sbjct: 131 AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA 190

Query: 193 KTNRIESANKEG 204
           K N I  +N +G
Sbjct: 191 KLNFIHKSNLDG 202

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} Length = 619

 Score = 63.3 bits (153), Expect = 7e-12
 Identities = 43/255 (16%), Positives = 86/255 (33%), Gaps = 59/255 (23%)

Query: 5   ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD-- 62
             +   E  +Y++  +  S +      G+ +   I ++I SP  +      R    T+  
Sbjct: 217 FALTLFEDILYWTDWSTHSILACNKYTGEGLR-EIHSDIFSPMDIHAFSQQRQPNATNPC 275

Query: 63  -----------------------------------------------SQMDTISMANLND 75
                                                          ++   +   +L+ 
Sbjct: 276 GIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDT 335

Query: 76  DQPKVIV--SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK 133
                IV   +D+ +   I   P    ++W+D       I  S +DG+  +  +  A + 
Sbjct: 336 PDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDD--EVRAIRRSFIDGSGSQFVV-TAQIA 392

Query: 134 LPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NCTYPFGLSI--TDEKYYWT 190
            P+ +AVD+    L W D  +  +E   +   +R+ + S +   P  + +       YWT
Sbjct: 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWT 452

Query: 191 DW-KTNRIESANKEG 204
           DW +  +IE A  +G
Sbjct: 453 DWGEIPKIERAALDG 467

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score =  183 bits (466), Expect = 5e-57
 Identities = 75/201 (37%), Positives = 111/201 (55%), Gaps = 4/201 (1%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           I +        V++S V     I RA+L+G NVE+V++T + SP GL  DWV+  LYWTD
Sbjct: 76  IALDFHHRRELVFWSDVTLDR-ILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTD 134

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           S    I +ANL+    KV++ + L  PR I +HP    ++W+DW  + P+IE S++DG+ 
Sbjct: 135 SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDGSG 193

Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY-SNCTYPFGLS 181
           R I      L  PN L +D+    + WVDA    +E   +    R+ V      +PF ++
Sbjct: 194 RRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT 252

Query: 182 ITDEKYYWTDWKTNRIESANK 202
           + ++  YWTDW T  I SANK
Sbjct: 253 VFEDSLYWTDWHTKSINSANK 273

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score =  102 bits (254), Expect = 6e-26
 Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 8/203 (3%)

Query: 12  GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMA 71
           G       A++  I++          ++  N+ +   L F     +++W+D  +D I  A
Sbjct: 42  GPEPVLLFANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRA 100

Query: 72  NLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD 131
           NLN    + +VS  L +P G+ V   + KL+W+D   S  +IE +NLDG  R++ L    
Sbjct: 101 NLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS--RIEVANLDGAHRKV-LLWQS 157

Query: 132 LKLPNSLAVDFRTDELCWVD-ADSKSLECMTIRNRVRRKVYS-NCTYPFGLSI--TDEKY 187
           L+ P ++A+      + W D  ++  +E  ++    RR +   +  +P GL+I     + 
Sbjct: 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRM 217

Query: 188 YWTDWKTNRIESANKEGERAPSI 210
           YW D K + IE AN +G    ++
Sbjct: 218 YWVDAKHHVIERANLDGSHRKAV 240

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 53.0 bits (126), Expect = 2e-08
 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
            G+T+D    ++Y+   A    I+RA+LDG + + VI+  +  P  +T       LYWTD
Sbjct: 206 NGLTIDYAGRRMYWVD-AKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTD 262

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGP 111
               +I+ AN    + + I+   L  P  I     + +   +  NR G 
Sbjct: 263 WHTKSINSANKFTGKNQEIIRNKLHFPMDIHT--LHPQRQPAGKNRCGD 309

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score =  189 bits (481), Expect = 8e-57
 Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 9/236 (3%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRS------PEGLTFDWVNR 56
             I  D ++ Q+Y+        I++A  DG     V+ +++ S      P  L+ D  +R
Sbjct: 343 RAIDYDPLDKQLYWIDSRQNM-IRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSR 401

Query: 57  VLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS 116
            +YWT    + I++  L+     V++  +   PR +VV+P    +++++     PKIE +
Sbjct: 402 YIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERA 461

Query: 117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV-YSNCT 175
            LDGT+RE+ L  + L  P +LA+D R  +L W D+D + +E   +    R  +  SN  
Sbjct: 462 ALDGTEREV-LFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNIL 520

Query: 176 YPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP 231
            P GL++ +   YW D +   IE  +  G    +     +            +   
Sbjct: 521 QPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQE 576

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score =  188 bits (478), Expect = 2e-56
 Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 4/208 (1%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
             +  D  + ++Y++ ++ K+ I RA ++G  +E V+   +  PEG+  DW+ + LYW D
Sbjct: 40  SALDFDVTDNRIYWTDISLKT-ISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWAD 98

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           +  + I ++ L+    +V+V KDL +PR + + P    ++W++W    PKI+ + +DG++
Sbjct: 99  TGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGK-PKIDRAAMDGSE 157

Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI 182
           R   +   ++   N L +D+    L W D D+  +E   +    R  +  +  +PFGL+ 
Sbjct: 158 RTTLVP--NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQ 215

Query: 183 TDEKYYWTDWKTNRIESANKEGERAPSI 210
             +  YWTDW    IE ANK   +  +I
Sbjct: 216 YQDYIYWTDWSRRSIERANKTSGQNRTI 243

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score =  126 bits (318), Expect = 9e-34
 Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 7/190 (3%)

Query: 19  VADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ 77
            + ++ I+R  L+  N    I  T ++    L FD  +  +YWTD  + TIS A +N   
Sbjct: 11  FSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA 70

Query: 78  PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNS 137
            + +V   L  P G+ V    + L+W+D   +  +IE S LDG  R++ L   DL  P +
Sbjct: 71  LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTN--RIEVSKLDGQHRQV-LVWKDLDSPRA 127

Query: 138 LAVDFRTDELCWVDADSKS-LECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKT 194
           LA+D     + W +   K  ++   +    R  +  N     GL+I     + YWTD  T
Sbjct: 128 LALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDT 187

Query: 195 NRIESANKEG 204
           N IES+N  G
Sbjct: 188 NLIESSNMLG 197

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score =  110 bits (275), Expect = 5e-28
 Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 16/205 (7%)

Query: 15  YYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN 72
            +   + KS+I R  +D +   D+I    ++R+   + +D +++ LYW DS+ + I  A 
Sbjct: 309 TFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQ 368

Query: 73  LNDDQPKVIVSKDLVN------PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF 126
            +  Q   +V   + +      P  + +  Y R ++W+    +   I  + LDG    + 
Sbjct: 369 EDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATN--VINVTRLDGRSVGVV 426

Query: 127 LKAADLKLPNSLAVDFRTDELCWVDADSKS--LECMTIRNRVRRK-VYSNCTYPFGLSI- 182
           LK  +   P ++ V+     + + +   +S  +E   +    R    +S  + P  L++ 
Sbjct: 427 LK-GEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALD 485

Query: 183 -TDEKYYWTDWKTNRIESANKEGER 206
               K +W D    RIES++  G  
Sbjct: 486 SRLGKLFWADSDLRRIESSDLSGAN 510

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* Length = 628

 Score = 54.8 bits (131), Expect = 6e-09
 Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 3/107 (2%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           I + +D   G+++++  +D   I+ + L G N   +  +NI  P GLT       LYW D
Sbjct: 480 IALALDSRLGKLFWAD-SDLRRIESSDLSGANRIVLEDSNILQPVGLTVF--ENWLYWID 536

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS 109
            Q   I   ++   + +  V   +     I          +     +
Sbjct: 537 KQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCA 583

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} Length = 302

 Score = 77.8 bits (191), Expect = 3e-17
 Identities = 21/198 (10%), Positives = 67/198 (33%), Gaps = 21/198 (10%)

Query: 10  VEGQVYYSSVAD--KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDT 67
           +   +YY        +S+ R  +DG+  + +    + +      +  +R  Y+ + +   
Sbjct: 114 IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYLFT-----CNTSDRYFYYNNPKNGQ 168

Query: 68  ISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL 127
           +   +       +    +   P  +        +++ D N     I   N++  +  +  
Sbjct: 169 LYRYDTASQSEALFYDCNCYKPVVL----DDTNVYYMDVN-RDNAIVHVNINNPNPVVLT 223

Query: 128 KAADLKLPNSLAVDFRTDELC-WVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEK 186
           +       N    +     +      D+ +L  +       +++         +++T + 
Sbjct: 224 E------ANIEHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG--EFCNINVTSQY 275

Query: 187 YYWTDWKTNRIESANKEG 204
            Y+TD+ +N+    + + 
Sbjct: 276 VYFTDFVSNKEYCTSTQN 293

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} Length = 302

 Score = 56.7 bits (136), Expect = 9e-10
 Identities = 21/204 (10%), Positives = 57/204 (27%), Gaps = 22/204 (10%)

Query: 11  EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISM 70
           +G+V++S+  D   +   ++DG N+  +             +     +Y+  +    I+ 
Sbjct: 25  DGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDTAMY-----INADKNYVYYVRNNNQKITS 79

Query: 71  ANLNDDQPKVIVS--------KDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGT 121
                     +            L     I        +++  ++      +    +DG 
Sbjct: 80  QTFFSYDRNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGE 139

Query: 122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLS 181
           +++                +       + +  +  L      ++     Y    Y   + 
Sbjct: 140 EKKKIKN------HYLFTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCYK-PVV 192

Query: 182 ITDEKYYWTDWKTN-RIESANKEG 204
           + D   Y+ D   +  I   N   
Sbjct: 193 LDDTNVYYMDVNRDNAIVHVNINN 216

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Length = 300

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 34/205 (16%), Positives = 74/205 (36%), Gaps = 28/205 (13%)

Query: 4   GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS 63
           GIT    +G+V+++     + I      G+  E  + T       L    +  + ++T++
Sbjct: 24  GITSS-EDGKVWFTQHKA-NKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDI-WFTEN 80

Query: 64  QMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR 123
             + I   +      +  + +    P GI        ++++  N  G +I     DGT  
Sbjct: 81  GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLN--GDRIGKLTADGTIY 137

Query: 124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR----------KVYSN 173
           E  L       P  + +   +D   W   ++++       N + R           + +N
Sbjct: 138 EYDL-PNKGSYPAFITLG--SDNALWF-TENQN-------NSIGRITNTGKLEEYPLPTN 186

Query: 174 CTYPFGLSIT-DEKYYWTDWKTNRI 197
              P G++   D   ++ +   N+I
Sbjct: 187 AAAPVGITSGNDGALWFVEIMGNKI 211

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Length = 299

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 34/216 (15%)

Query: 4   GITVDCVEGQVYYSSVADKSS--IKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWT 61
           GITV   +G+V+   +    +  I   +LDGK  E  + T       LT    +  +++T
Sbjct: 19  GITVS-DKGKVW---ITQHKANMISCINLDGKITEYPLPTPDAKVMCLTIS-SDGEVWFT 73

Query: 62  DSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDW-NRSGPKIEWSNLDG 120
           ++  + I          +  +      P GI   P    +++++       +I     DG
Sbjct: 74  ENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRI---TDDG 129

Query: 121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR----------KV 170
             RE  L       P+ + +   +D   W   ++++       N + R          K+
Sbjct: 130 KIREYEL-PNKGSYPSFITLG--SDNALWF-TENQN-------NAIGRITESGDITEFKI 178

Query: 171 YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGE 205
            +  + P G++   D+  ++ +   N+I      GE
Sbjct: 179 PTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGE 214

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Length = 299

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 11/140 (7%)

Query: 4   GITVDCVEGQVYYSSVADKSS--IKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWT 61
            IT+   +  ++     +  +  I R    G   E  I T    P G+T    +  L++ 
Sbjct: 145 FITLG-SDNALW---FTENQNNAIGRITESGDITEFKIPTPASGPVGITKG-NDDALWFV 199

Query: 62  DSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT 121
           +   + I     + +  +  +      P  I        L++++W  +  KI     +  
Sbjct: 200 EIIGNKIGRITTSGEITEFKIPTPNARPHAITAGA-GIDLWFTEWGAN--KIGRLTSNNI 256

Query: 122 DREIFLKAADLKLPNSLAVD 141
             E  +       P+ +  D
Sbjct: 257 IEEYPI-QIKSAEPHGICFD 275

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	232
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	100.0
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	100.0
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	100.0
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	100.0
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	100.0
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	100.0
3v65_B	386	Low-density lipoprotein receptor-related protein;	100.0
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	100.0
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	100.0
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	100.0
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	100.0
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	100.0
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	100.0
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	100.0
3v65_B	386	Low-density lipoprotein receptor-related protein;	100.0
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	100.0
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	100.0
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	100.0
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.97
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	99.95
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	99.94
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	99.93
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.93
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	99.93
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.9
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.9
3kya_A	496	Putative phosphatase; structural genomics, joint c	99.9
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.89
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.89
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	99.89
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.89
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	99.88
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.87
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.87
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.86
3kya_A	496	Putative phosphatase; structural genomics, joint c	99.86
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.86
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.85
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.85
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.84
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.83
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	99.83
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.83
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.83
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.82
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.82
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.81
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	99.81
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.81
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	99.78
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.77
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.77
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.76
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.75
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.74
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	99.73
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	99.73
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.72
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	99.72
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.71
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.7
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	99.69
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	99.69
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.67
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.67
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	99.66
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.65
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	99.64
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.63
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.62
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.61
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.61
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.59
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.58
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.57
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.57
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	99.57
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.55
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	99.53
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.53
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.53
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.52
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.52
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.52
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	99.46
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.46
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.43
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	99.43
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	99.43
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.42
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.41
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.41
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.41
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	99.41
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.41
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.39
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.39
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.37
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.37
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.36
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.34
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.34
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	99.33
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.32
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.27
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.27
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.26
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.26
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.23
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.22
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.22
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.22
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.21
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	99.18
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.18
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.18
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.17
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.15
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.15
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.12
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.07
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.06
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	99.02
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.0
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	99.0
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.0
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	99.0
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.95
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.94
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.92
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.91
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.9
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	98.86
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.85
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	98.83
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	98.75
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	98.73
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	98.68
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	98.65
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.64
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	98.62
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	98.62
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	98.62
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.58
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.57
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	98.56
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	98.55
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	98.52
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.51
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.5
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.49
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	98.48
3ow8_A	321	WD repeat-containing protein 61; structural genomi	98.48
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	98.47
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.46
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	98.45
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	98.43
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	98.41
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.4
3ow8_A	321	WD repeat-containing protein 61; structural genomi	98.39
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	98.35
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	98.35
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	98.35
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	98.34
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	98.34
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	98.34
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	98.28
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	98.26
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	98.26
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	98.25
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	98.24
1k32_A	1045	Tricorn protease; protein degradation, substrate g	98.23
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.22
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	98.21
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	98.21
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.2
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.19
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.14
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	98.13
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	98.12
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	98.11
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	98.11
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.1
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.08
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	98.08
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	98.07
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	98.05
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.04
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	98.04
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.04
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	98.04
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	97.99
1k32_A	1045	Tricorn protease; protein degradation, substrate g	97.99
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	97.98
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	97.98
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	97.98
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	97.97
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	97.96
3jrp_A	379	Fusion protein of protein transport protein SEC13	97.93
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	97.93
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	97.93
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	97.9
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	97.89
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	97.84
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	97.83
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	97.81
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	97.8
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.8
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.8
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	97.79
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	97.79
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	97.78
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	97.78
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	97.74
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	97.74
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	97.73
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	97.72
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.72
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	97.7
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	97.67
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.67
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	97.67
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	97.66
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	97.65
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	97.64
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	97.64
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	97.64
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.63
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	97.59
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	97.57
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	97.55
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	97.53
3jro_A	753	Fusion protein of protein transport protein SEC13	97.51
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	97.49
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	97.47
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	97.45
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	97.43
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	97.4
3jrp_A	379	Fusion protein of protein transport protein SEC13	97.4
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	97.39
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	97.34
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	97.33
3jro_A	753	Fusion protein of protein transport protein SEC13	97.32
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	97.27
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	97.22
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.22
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	97.21
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	97.21
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	97.21
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	97.2
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	97.19
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	97.18
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	97.18
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	97.14
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	97.14
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	97.14
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	97.09
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	97.05
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	97.01
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	96.99
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	96.98
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	96.94
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	96.86
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	96.75
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	96.73
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	96.72
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	96.7
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	96.61
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	96.52
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	96.37
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	96.34
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	96.2
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.07
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	96.04
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	95.97
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	95.75
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	95.68
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	95.56
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	95.51
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	95.47
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	95.46
3ott_A	758	Two-component system sensor histidine kinase; beta	95.42
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	95.38
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	95.29
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	95.08
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	94.43
2pm7_B	297	Protein transport protein SEC13, protein transport	94.4
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	94.31
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	94.26
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	94.16
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	93.92
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	93.89
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	93.55
3ott_A	758	Two-component system sensor histidine kinase; beta	93.51
2pm7_B	297	Protein transport protein SEC13, protein transport	93.35
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	92.86
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	92.75
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	92.38
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	92.34
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	91.04
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	89.76
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	89.38
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	89.03
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	88.45
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	88.15
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	87.83
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	87.14
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	85.03
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	83.82
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	83.46
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	83.32
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	81.38

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=100.00  E-value=9.9e-42  Score=274.39  Aligned_cols=222  Identities=31%  Similarity=0.622  Sum_probs=200.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |++++||+.++.|||+|...+ +|+++.++|... +.++..++..|.||++||.+++|||+|...++|.+++++|...+.
T Consensus        37 ~~~ld~d~~~~~lyw~D~~~~-~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~  115 (318)
T 3sov_A           37 AAAVDFVFSHGLIYWSDVSEE-AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV  115 (318)
T ss_dssp             EEEEEEEGGGTEEEEEETTTT-EEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             cEEEEEEeCCCEEEEEECCCC-cEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence            679999999999999999999 999999998753 456666788999999999999999999999999999999999888


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +....+..|+++++||.+|.|||+|++ ..++|++++++|...+.++... +..|+||++|+.+++|||+|...++|+++
T Consensus       116 l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~~~~I~~~  193 (318)
T 3sov_A          116 LFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLNFIHKS  193 (318)
T ss_dssp             EECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCeEEEEECC-CCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence            887789999999999989999999986 3578999999999988888766 89999999999889999999999999999


Q ss_pred             ecCCCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +++|..++++.+ .+.+|+|++++++.+||+|+.+++|.++++. |+..+.+..   ....|++|++++++
T Consensus       194 d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~---~~~~P~~i~v~~~~  261 (318)
T 3sov_A          194 NLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHS---DIFSPMDIHAFSQQ  261 (318)
T ss_dssp             ETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC---CCSSCCCEEEECGG
T ss_pred             cCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeC---CCCCCcEEEEeccc
Confidence            999998888876 7899999999999999999999999999995 777776653   34689999998764

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=100.00  E-value=3.2e-41  Score=279.53  Aligned_cols=223  Identities=26%  Similarity=0.558  Sum_probs=199.5

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .|++++||+.++.|||+|...+ +|++++++|    ...+.++...+..|.|||+||.+++|||+|..+++|.+++++|.
T Consensus       113 ~~~~l~~d~~~~~lywsD~~~~-~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~  191 (400)
T 3p5b_L          113 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  191 (400)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT-EEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred             cceEEeeeeccCceEEEecCCC-eEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence            4789999999999999999999 999999998    34556676688999999999999999999999999999999999


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      .+.+++...+..|++|++||.++.|||+|++. .++|++++++|...+.++... +..|+||++|+.+++|||+|...++
T Consensus       192 ~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~-~~~I~~~~~dG~~~~~~~~~~-l~~P~glavd~~~~~lY~aD~~~~~  269 (400)
T 3p5b_L          192 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS  269 (400)
T ss_dssp             SEEEEEECSSCCEEEEEEETTTTEEEEEECSS-SCCEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             ceEEEEeCCCCCcceEEEecccCeEEEEeCCC-CCEEEEEeCCCCccEEEEECC-CCceEEEEEEeCCCEEEEEECCCCE
Confidence            99888888899999999999999999999873 578999999999999888766 8999999999999999999999999


Q ss_pred             EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      |++++++|..++++..   .+.+|.||++++++|||+||.+++|.++++ .|+..+++.   .+...|++|+++++.
T Consensus       270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~---~~~~~p~~i~v~~~~  343 (400)
T 3p5b_L          270 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNL  343 (400)
T ss_dssp             EEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE---CSCSCEEEEEEESGG
T ss_pred             EEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe---cCCCCCceEEEEeec
Confidence            9999999998888865   588999999999999999999999999996 577777665   345689999999864

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=100.00  E-value=2.1e-41  Score=293.83  Aligned_cols=225  Identities=34%  Similarity=0.664  Sum_probs=205.3

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      +|.+++||+.++.|||+|...+ +|+++.++|+..+.++..++..|.|||+||.+++|||+|...++|.+++++|..+++
T Consensus       350 ~~~~ld~d~~~~~ly~sD~~~~-~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~  428 (619)
T 3s94_A          350 HAIAIDYDPVEGYIYWTDDEVR-AIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI  428 (619)
T ss_dssp             SEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             ccEEEEEEcCCCeEEEEeCCCC-eEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence            4789999999999999999988 999999999888788877889999999999999999999999999999999999988


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +....+..|++||+||.+|.|||+|++. .++|+++.++|...++++... +.+|+||++|+.+++|||+|...++|+++
T Consensus       429 l~~~~l~~P~~iavdp~~G~ly~tD~g~-~~~I~r~~~dG~~~~~l~~~~-l~~P~GlalD~~~~~LY~aD~~~~~I~~~  506 (619)
T 3s94_A          429 LISEDLEEPRAIVLDPMVGYMYWTDWGE-IPKIERAALDGSDRVVLVNTS-LGWPNGLALDYDEGKIYWGDAKTDKIEVM  506 (619)
T ss_dssp             EECTTCCSEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEECCCCCeeeEEEEcCCCcEEEecCCC-CCEEEEEccCCCccEEEEeCC-CCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence            8888899999999999889999999974 689999999999999888766 99999999999999999999999999999


Q ss_pred             ecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCCC
Q psy5751         161 TIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSCP  231 (232)
Q Consensus       161 ~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~~  231 (232)
                      +++|..++++. ..+.+|+|||+++++|||||+.+++|.++++.+...+++.   .....|++|++++.+|+
T Consensus       507 ~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~~~~~---~~~~~~~~i~~~~~~~~  575 (619)
T 3s94_A          507 NTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVII---DQLPDLMGLKATNVHRV  575 (619)
T ss_dssp             ESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCCEEEEE---CSCCCEEEEEEEESSCC
T ss_pred             ecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCceEEEe---cCCCCCceeeecccccc
Confidence            99999888775 5889999999999999999999999999999866554443   45678999999988764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-41  Score=275.43  Aligned_cols=223  Identities=35%  Similarity=0.676  Sum_probs=202.2

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|.+++||+.++.|||+|...+ +|++++++|...+.++..++..|.||++||.+++|||+|...++|.+++++|.....
T Consensus        74 ~~~~l~~d~~~~~ly~~D~~~~-~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~  152 (349)
T 3v64_C           74 NAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV  152 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             ceEEEEEeccccEEEEEeccCC-ceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence            3789999999999999999999 999999999887777777888999999999999999999999999999999999888


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +....+..|+++++||.++.|||+|+.. .++|++++++|...+.++... +..|+||++|+.+++|||+|...++|+++
T Consensus       153 l~~~~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~~~I~~~  230 (349)
T 3v64_C          153 LLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERA  230 (349)
T ss_dssp             EECTTCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEESCCSS-CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEeCCCCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCCCCcEEEEECC-CCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence            8887889999999999999999999873 489999999999988877665 88999999999899999999999999999


Q ss_pred             ecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +++|..++++. ..+.+|+||+++++.||||||.+++|.++++ +|+..+.+.   .....|+||++++++
T Consensus       231 ~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~---~~~~~p~gi~v~~~~  298 (349)
T 3v64_C          231 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR---NKLHFPMDIHTLHPQ  298 (349)
T ss_dssp             ETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE---CSCSCCCCEEEECGG
T ss_pred             eCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec---cCCCCCceEEEEccc
Confidence            99998877765 4789999999999999999999999999995 687777765   346789999999864

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=100.00  E-value=2.4e-41  Score=293.84  Aligned_cols=224  Identities=29%  Similarity=0.628  Sum_probs=204.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|++++||+.++.|||+|...+ +|+++.++|+..+.++..++..|.|||+||.+++|||+|...++|.+++++|..+++
T Consensus        38 ~~~~l~~d~~~~~lywtD~~~~-~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~  116 (628)
T 4a0p_A           38 EASALDFDVTDNRIYWTDISLK-TISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV  116 (628)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred             ceEEEEEECCCCEEEEEECCCC-eEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence            4789999999999999999999 999999999888788877888999999999999999999999999999999999988


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +....+..|++||+||.+|.|||+|++. .++|++++++|...++++..  +..|+||++|+.+++|||+|...++|+++
T Consensus       117 l~~~~l~~P~~iavdp~~G~lY~tD~g~-~~~I~r~~~dG~~~~~l~~~--~~~P~GlalD~~~~~LY~aD~~~~~I~~~  193 (628)
T 4a0p_A          117 LVWKDLDSPRALALDPAEGFMYWTEWGG-KPKIDRAAMDGSERTTLVPN--VGRANGLTIDYAKRRLYWTDLDTNLIESS  193 (628)
T ss_dssp             EECSSCCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECS--CSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEeCCCCCcccEEEccCCCeEEEeCCCC-CCEEEEEeCCCCceEEEECC--CCCcceEEEccccCEEEEEECCCCEEEEE
Confidence            8877899999999999999999999863 68999999999999988864  89999999999999999999999999999


Q ss_pred             ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCCC
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSCP  231 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~~  231 (232)
                      +++|..++++...+.+|.||++++++||||||.+++|.++++. |+..+.+.   .+...|++|+|++++|+
T Consensus       194 d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~---~~~~~p~~i~v~~~~~q  262 (628)
T 4a0p_A          194 NMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQ---GHLDYVMDILVFHSSRQ  262 (628)
T ss_dssp             ETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE---CSCCSCCEEEEECGGGS
T ss_pred             cCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEe---cCCCCcceeeeeeeccc
Confidence            9999988877889999999999999999999999999999986 66666554   34567999999998654

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=100.00  E-value=4.4e-41  Score=292.13  Aligned_cols=225  Identities=27%  Similarity=0.447  Sum_probs=202.1

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC------CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT------NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN   74 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~------~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~   74 (232)
                      ++.+++||+.++.|||+|...+ +|+++.++|+..++++..      .+..|.|||+||.+++|||+|...++|.+++++
T Consensus       341 ~~~~ld~d~~~~~iy~sD~~~~-~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~  419 (628)
T 4a0p_A          341 NVRAIDYDPLDKQLYWIDSRQN-MIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD  419 (628)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CceEEEEecCCCeEEEEecCcc-eEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence            3789999999999999999999 999999999887666654      567899999999999999999999999999999


Q ss_pred             CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      |..+.+++...+..|++||+||.+|.|||+|++...++|++++++|...++++... +.+|+||++|+.+++|||+|...
T Consensus       420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~-l~~P~gla~D~~~~~LYw~D~~~  498 (628)
T 4a0p_A          420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSG-LSKPIALALDSRLGKLFWADSDL  498 (628)
T ss_dssp             SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEETTT
T ss_pred             CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEecc-CCCccEEEEeCCCCEEEEEeCCC
Confidence            99888888888999999999999999999999854348999999999999998876 99999999999999999999999


Q ss_pred             CcEEEEecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         155 KSLECMTIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      ++|++++++|..++++. ..+.+|+||++++++|||||+.+++|.++++. |+..+.+..   ....|.+|++++..+
T Consensus       499 ~~I~~~~~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~---~~~~~~~i~~~~~~~  573 (628)
T 4a0p_A          499 RRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQA---RIAQLSDIHAVKELN  573 (628)
T ss_dssp             TEEEEEETTSCSCEEEECSSCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEEC---CCTTEEEEEEECCCC
T ss_pred             CEEEEEeCCCCceEEEEcCCCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEec---cCCCCcceEEEeecc
Confidence            99999999999999887 57899999999999999999999999999998 777776653   345789999988765

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-40  Score=275.24  Aligned_cols=223  Identities=35%  Similarity=0.676  Sum_probs=202.7

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|.+++||+.++.|||+|...+ +|++++++|...+.++..++..|.||++||.+++|||+|...++|.+++++|.....
T Consensus       117 ~~~gl~~d~~~~~ly~~D~~~~-~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~  195 (386)
T 3v65_B          117 NAIALDFHHRRELVFWSDVTLD-RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV  195 (386)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT-EEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred             ccEEEEEecCCCeEEEEeCCCC-cEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence            3789999999999999999999 999999999887777777888999999999999999999999999999999999888


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ++...+..|+++++||.++.|||+|+.. .++|++++++|...+.++... +..|+||++|+.+++|||+|...++|+++
T Consensus       196 l~~~~l~~P~giavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~  273 (386)
T 3v65_B          196 LLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERA  273 (386)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred             eecCCCCCCcEEEEEcCCCeEEEeccCC-CCEEEEEeCCCCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECCCCEEEEE
Confidence            8888889999999999999999999873 489999999999998888766 88999999999889999999999999999


Q ss_pred             ecCCCceEEEe-cCCCceEEEEEECCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVY-SNCTYPFGLSITDEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~-~~~~~p~gla~~~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +++|..++++. ..+.+|+||+++++.||||+|.+++|.++++ +|+..+++.   .....|+||++++++
T Consensus       274 d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~---~~~~~p~gi~v~~~~  341 (386)
T 3v65_B          274 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR---NKLHFPMDIHTLHPQ  341 (386)
T ss_dssp             CTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE---CSCSCCCCEEEESGG
T ss_pred             eCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc---cCCCCCceEEEEchh
Confidence            99998877765 4789999999999999999999999999995 687777775   345789999999864

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=100.00  E-value=5.2e-40  Score=264.49  Aligned_cols=224  Identities=26%  Similarity=0.551  Sum_probs=195.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .|++++||+.++.|||+|...+ +|++++++|    ...+.++...+..|.||++||.+++|||+|...++|.+++++|.
T Consensus        31 ~p~g~~~d~~~~~ly~~D~~~~-~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~  109 (316)
T 1ijq_A           31 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  109 (316)
T ss_dssp             SEEEEEEETTTTEEEEEETTTT-EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             ceEEEEEEeCCCEEEEEECCCC-cEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence            3789999999999999999988 999999997    44445565667899999999999999999999999999999999


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      ..+.++...+..|+++++||.++.|||++++. .++|++++++|...+++.... +..|+||++|+.+++|||+|...++
T Consensus       110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-~~~I~~~~~dG~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~~~~  187 (316)
T 1ijq_A          110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS  187 (316)
T ss_dssp             SEEEEEECTTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             ceEEEEECCCCCcceEEeCCCCCEEEEEccCC-CCeEEEEcCCCCCeEEEEECC-CCCceEEEEeccCCEEEEEECCCCe
Confidence            88888877889999999999899999999863 478999999999988877665 8999999999999999999999999


Q ss_pred             EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      |++++++|..++++..   .+.+|.||++++++|||+++.+++|.++++. |+..+.+.   .+...|+||++++++.
T Consensus       188 I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~---~~~~~p~~i~v~~~~~  262 (316)
T 1ijq_A          188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNLT  262 (316)
T ss_dssp             EEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE---CSCSCCCCEEEESGGG
T ss_pred             EEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe---cCCCCceEEEEecccc
Confidence            9999999998888864   5789999999999999999999999999985 77777664   3456899999998643

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=100.00  E-value=4.8e-40  Score=290.96  Aligned_cols=223  Identities=26%  Similarity=0.553  Sum_probs=198.4

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC----ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGK----NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~----~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .|++++||+.++.|||+|...+ +|+++.++|.    ....++...+..|.|||+||.+++|||+|..+++|++++++|.
T Consensus       425 ~~~gl~~d~~~~~lY~sD~~~~-~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~  503 (791)
T 3m0c_C          425 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  503 (791)
T ss_dssp             SEEEEEEETTTTEEEEEETTTT-EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             ceEEEeecccCCeeEEeeccce-eEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence            3789999999999999999998 9999999984    3455666688999999999999999999999999999999999


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      .+++++...+..|++|||||.+|+|||+|++. .++|++++++|..+++++... +.+|+||+||+.+++|||+|...++
T Consensus       504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~-~~~I~~~~~dG~~~~~lv~~~-l~~P~GLavD~~~~~LYwaD~~~~~  581 (791)
T 3m0c_C          504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS  581 (791)
T ss_dssp             SEEEEEECTTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             eEEEEEeCCCCCcceEEEecCCCCEEEecCCC-CCeEEEEecCCCceEEEEeCC-CCCceEEEEecCCCeEEEEeCCCCc
Confidence            99898888899999999999899999999873 478999999999999888876 8999999999999999999999999


Q ss_pred             EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      |++++++|..+++++.   .+.+|.||++++++|||||+.+++|.++++. |+..+++.   .+...|++|+|+++.
T Consensus       582 I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~---~~l~~P~~i~v~h~~  655 (791)
T 3m0c_C          582 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNL  655 (791)
T ss_dssp             EEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE---CSCSCCCCEEEESGG
T ss_pred             EEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEee---cCCCCceeEeeeccc
Confidence            9999999999888865   5789999999999999999999999999976 66666664   457789999999864

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=100.00  E-value=2e-40  Score=287.72  Aligned_cols=222  Identities=31%  Similarity=0.618  Sum_probs=190.7

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .|++++|++.++.|||+|...+ +|+++.++|... +.++..++..|.|||+||.+++|||+|...++|.+++++|..++
T Consensus        41 ~~~~ld~~~~~~~ly~sD~~~~-~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~  119 (619)
T 3s94_A           41 DAAAVDFVFSHGLIYWSDVSEE-AIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK  119 (619)
T ss_dssp             CEEEEEEETTTTEEEEEETTTT-EEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             ceEEEEEEeCCCEEEEEECCCC-eEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence            4789999999999999999999 999999998753 56677778899999999999999999999999999999999998


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      ++....+..|++||+||.+|.|||+|++. .++|++++++|...++++... +.+|+||++|+.+++|||+|...++|++
T Consensus       120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~-~~~I~r~~~dG~~~~~l~~~~-~~~P~Glald~~~~~LY~aD~~~~~I~~  197 (619)
T 3s94_A          120 VLFWQELDQPRAIALDPSSGFMYWTDWGE-VPKIERAGMDGSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLNFIHK  197 (619)
T ss_dssp             EEECSSCSCCCCEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             EEEeCCCCCCceEEEecCCCeEEEeccCC-CCEEEEEECCCCceEEEEeCC-CCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence            88877899999999999899999999874 689999999999999988766 8999999999999999999999999999


Q ss_pred             EecCCCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751         160 MTIRNRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       160 ~~~~g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ++++|..++++.. .+.+|+||++++++||||||.+++|.++++. |+..+.+.   .+...|+||+++++
T Consensus       198 ~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~---~~~~~p~~i~v~~~  265 (619)
T 3s94_A          198 SNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH---SDIFSPMDIHAFSQ  265 (619)
T ss_dssp             ESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECC---SCCCCCSEEEECCG
T ss_pred             ecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEe---cCCCCCcEEEEEcc
Confidence            9999998888866 8899999999999999999999999999997 45544442   44668999999976

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=100.00  E-value=9.2e-38  Score=245.42  Aligned_cols=227  Identities=40%  Similarity=0.790  Sum_probs=197.9

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      |.++++|+.++.|||+|...+ +|++++++|.....++...+..|.+|++|+.++.|||+|...++|.+++++|...+.+
T Consensus        38 ~~gi~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~  116 (267)
T 1npe_A           38 IIGLAFDCVDKVVYWTDISEP-SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL  116 (267)
T ss_dssp             EEEEEEETTTTEEEEEETTTT-EEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred             EEEEEEecCCCEEEEEECCCC-EEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence            679999999999999999988 9999999988766666666789999999998899999999999999999999888777


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      ....+..|+++++|+.+++|||++.....++|++++++|...+.+.... +..|++|++|+++++|||+|...++|.+++
T Consensus       117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~  195 (267)
T 1npe_A          117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLN  195 (267)
T ss_dssp             ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECC-CCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence            7666789999999998899999997644578999999998887776555 789999999998899999999999999999


Q ss_pred             cCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCCCC
Q psy5751         162 IRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSCPG  232 (232)
Q Consensus       162 ~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~~~  232 (232)
                      ++|..++.+...+..|.|+++++++|||+++.+++|.++++. |+..+.+.  ......|+||++.+++||.
T Consensus       196 ~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~--~g~~~~p~gi~~~~~~~~~  265 (267)
T 1npe_A          196 PAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH--PHKQTRLYGITIALSQCPQ  265 (267)
T ss_dssp             TTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC--CSSCCCCCCEEEECSCC--
T ss_pred             cCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEc--cccccccceeeecCccCCC
Confidence            998877777778899999999999999999999999999998 55555553  2334479999999999993

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=100.00  E-value=3.6e-37  Score=270.92  Aligned_cols=224  Identities=26%  Similarity=0.548  Sum_probs=193.9

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .|++++|++.++.|||+|...+ +|+++++++    .....++...+..|.||++||.+++|||+|...++|.+++++|.
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~-~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~  485 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  485 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTT-SBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred             ceEEEccccccCeEEEEecCCC-eEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence            3678999999999999999999 999999997    44444555567889999999999999999999999999999999


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      .+++++...+..|++||+||.+++|||++++. .++|++++++|...++++... +..|+||+||+.+++|||+|...++
T Consensus       486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~-~~~I~~~~~dG~~~~~l~~~~-l~~PnGlavd~~~~~LY~aD~~~~~  563 (699)
T 1n7d_A          486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS  563 (699)
T ss_dssp             CEEEECCCSSCCCCCEECCSSSSCCEECCCSS-SCCEEBCCSSSCCCCEESCSS-CSSCCCEEECTTTCCEEEEETTTTE
T ss_pred             ceEEEEeCCCCCcceEEEccCCCcEEEcccCC-CCeEEEEeCCCCCeeEEEeCC-CCCccEEEEeccCCEEEEEecCCCe
Confidence            88888777788999999999899999999863 478999999999888777665 8999999999999999999999999


Q ss_pred             EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      |++++++|..+++++.   .+.+|.||++++++|||++|.+++|.++++. |+..++|.   .+...|++|+|+++..
T Consensus       564 I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~---~~~~~P~~i~v~~~~~  638 (699)
T 1n7d_A          564 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHQLT  638 (699)
T ss_dssp             EEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC---TTCSSCCCCCBCSSSS
T ss_pred             EEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee---cCCCCCcEEEEeCccc
Confidence            9999999988888864   5789999999999999999999999999986 66555553   3356799999998764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-31  Score=218.59  Aligned_cols=209  Identities=26%  Similarity=0.476  Sum_probs=183.1

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR   90 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~   90 (232)
                      +..|++++..   .|++++++|.....++ ..+..|.+|++|+..+.|||+|...++|++++++|...+.++...+..|.
T Consensus        44 ~~~ll~~~~~---~I~~i~~~g~~~~~~~-~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~  119 (349)
T 3v64_C           44 EPVLLFANRI---DIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG  119 (349)
T ss_dssp             CCEEEEECBS---CEEEECTTSCCEEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred             CceeEeeccc---ceEEEeCCCCeeEEee-cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc
Confidence            5678887644   7999999998764444 56789999999998999999999999999999999988888877888999


Q ss_pred             EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCceEE
Q psy5751          91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVRRK  169 (232)
Q Consensus        91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~~~  169 (232)
                      |+|+|+.++.|||++..  ..+|++++++|...++++... +..|++|++|+.++.|||+|... ++|++++++|..++.
T Consensus       120 glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~  196 (349)
T 3v64_C          120 GLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI  196 (349)
T ss_dssp             EEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             EEEEecCCCeEEEEcCC--CCeEEEEcCCCCceEEEEeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence            99999989999999986  568999999999888887765 89999999999889999999998 999999999998877


Q ss_pred             Eec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         170 VYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       170 ~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +.. .+..|.||+++  +++|||+|+..++|.+++.+|+..+.+..  .....|+||+++++
T Consensus       197 ~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~--~~~~~P~giav~~~  256 (349)
T 3v64_C          197 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPFAITVFED  256 (349)
T ss_dssp             SCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SSCSSEEEEEEETT
T ss_pred             EEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe--CCCCCceEEEEECC
Confidence            754 78899999997  78999999999999999999987775543  34779999999764

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=100.00  E-value=3e-31  Score=219.69  Aligned_cols=211  Identities=18%  Similarity=0.371  Sum_probs=182.0

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC----CCCEEEEeCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND----DQPKVIVSKDL   86 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~   86 (232)
                      ...|++++-  + .|+++++++.....++ ..+..|.+|++|+..+.|||+|...++|++.+++|    .....++...+
T Consensus        83 ~~~ll~~~~--~-~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~  158 (400)
T 3p5b_L           83 IAYLFFTNR--H-EVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI  158 (400)
T ss_dssp             SCEEEEEET--T-EEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred             cceeEEecc--c-eeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence            457788775  3 8999999988765554 56789999999999999999999999999999998    44667777788


Q ss_pred             CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCC
Q psy5751          87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNR  165 (232)
Q Consensus        87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~  165 (232)
                      ..|.|+|+|+.++.|||+|..  ..+|.+++++|....+++... +..|++|++|+.+++|||+|.+. ++|++++++|.
T Consensus       159 ~~p~glavD~~~~~lY~~d~~--~~~I~~~~~~g~~~~~l~~~~-~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~  235 (400)
T 3p5b_L          159 QAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  235 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETT--TTEEEEECTTTCSEEEEEECS-SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred             CCcccEEEEecCCceEEEECC--CCeEEEEeCCCCceEEEEeCC-CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence            899999999989999999986  568999999999988888766 89999999999889999999874 89999999999


Q ss_pred             ceEEEec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         166 VRRKVYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       166 ~~~~~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      .++.+.. .+..|.||+++  +++|||+|+..++|.+++.+|...+++........+|+||+++++
T Consensus       236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~  301 (400)
T 3p5b_L          236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED  301 (400)
T ss_dssp             SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETT
T ss_pred             ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCC
Confidence            8877754 78999999997  789999999999999999999888877654445789999999875

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=100.00  E-value=3.2e-31  Score=218.71  Aligned_cols=209  Identities=26%  Similarity=0.477  Sum_probs=183.0

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR   90 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~   90 (232)
                      ...|++++..   .|+++++++.....++ ..+..|.+|++|+..+.|||+|...++|++++++|...+.++...+..|.
T Consensus        87 ~~~l~~~~~~---~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~  162 (386)
T 3v65_B           87 EPVLLFANRI---DIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG  162 (386)
T ss_dssp             CCEEEEECBS---CEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC
T ss_pred             cceeEeecCc---cceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc
Confidence            5677777653   7999999987764444 56789999999998999999999999999999999988777777888999


Q ss_pred             EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCceEE
Q psy5751          91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVRRK  169 (232)
Q Consensus        91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~~~  169 (232)
                      |+|+|+.++.|||++..  ..+|++++++|...++++... +..|++|++|+.+++|||+|... ++|++++++|..++.
T Consensus       163 glavd~~~g~lY~~d~~--~~~I~~~~~dg~~~~~l~~~~-l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~  239 (386)
T 3v65_B          163 GLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI  239 (386)
T ss_dssp             CEEEETTTTEEEEEETT--TTEEEECBTTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             EEEEEeCCCeEEEEcCC--CCeEEEEeCCCCceEEeecCC-CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE
Confidence            99999989999999987  568999999999888888765 89999999999889999999998 899999999998877


Q ss_pred             Ee-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         170 VY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       170 ~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +. ..+..|.||+++  +++|||+|+.+++|.+++.+|+..+.+..  .+...|+||+++++
T Consensus       240 ~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~~~~P~giav~~~  299 (386)
T 3v65_B          240 IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS--QGLPHPFAITVFED  299 (386)
T ss_dssp             EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC--SSCSSEEEEEEETT
T ss_pred             EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE--CCCCCceEEEEECC
Confidence            75 478899999996  89999999999999999999987775543  34779999999764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=100.00  E-value=2.7e-30  Score=207.83  Aligned_cols=209  Identities=18%  Similarity=0.374  Sum_probs=176.2

Q ss_pred             EEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC----CCCEEEEeCCCCC
Q psy5751          13 QVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND----DQPKVIVSKDLVN   88 (232)
Q Consensus        13 ~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~~~   88 (232)
                      .|++++-.   .|.++++++.....++ ..+..|.++++|+.++.|||+|...++|++++++|    .....++...+..
T Consensus         3 ~ll~~~~~---~I~~i~~~~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~   78 (316)
T 1ijq_A            3 YLFFTNRH---EVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA   78 (316)
T ss_dssp             EEEEECBS---SEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred             EEEEECCC---eEEEEECCCcceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence            56777654   7999999987765554 46789999999998899999999999999999998    4556666667789


Q ss_pred             ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCce
Q psy5751          89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVR  167 (232)
Q Consensus        89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~  167 (232)
                      |.++|+|+.++.|||+|..  ..+|.+++++|.....++... +..|+++++|+.+++|||+|... ++|++++++|..+
T Consensus        79 p~glavd~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~-~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~  155 (316)
T 1ijq_A           79 PDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  155 (316)
T ss_dssp             CCEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred             cCEEEEeecCCeEEEEECC--CCEEEEEeCCCCceEEEEECC-CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence            9999999889999999976  578999999999888877755 88999999999889999999886 8999999999988


Q ss_pred             EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         168 RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       168 ~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +.+. ..+..|.||+++  +++|||+|+.+++|.+++.+|+..+++.........|+||+++++
T Consensus       156 ~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~  219 (316)
T 1ijq_A          156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED  219 (316)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT
T ss_pred             EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECC
Confidence            7775 478999999997  789999999999999999999888766543334678999999753

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=100.00  E-value=1.3e-30  Score=230.72  Aligned_cols=211  Identities=18%  Similarity=0.367  Sum_probs=180.8

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC----CCEEEEeCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD----QPKVIVSKDL   86 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~----~~~~~~~~~~   86 (232)
                      ...|++++..   .|+++.+++.....++ ..+..|.+|++|+..++|||+|..+++|++++++|.    ....++...+
T Consensus       395 ~p~Ll~an~~---~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l  470 (791)
T 3m0c_C          395 IAYLFFTNRH---EVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI  470 (791)
T ss_dssp             CCEEEEECBS---SEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred             cccccccccc---ceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence            3467777654   7999999987764444 567899999999999999999999999999999985    4566676788


Q ss_pred             CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCC
Q psy5751          87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNR  165 (232)
Q Consensus        87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~  165 (232)
                      ..|.|||+|+.++.|||+|..  ..+|++++++|...++++... +..|.+|+||+.+++|||+|.+. ++|++++++|.
T Consensus       471 ~~P~GLAvD~~~~~LY~tD~~--~~~I~v~~ldG~~~~~l~~~~-l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~  547 (791)
T 3m0c_C          471 QAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  547 (791)
T ss_dssp             SCCCEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred             CCcceeeeeecCCcEEEEecC--CCeEEEEeCCCCeEEEEEeCC-CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence            999999999989999999986  568999999999998888766 88999999999999999999886 89999999999


Q ss_pred             ceEEEec-CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         166 VRRKVYS-NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       166 ~~~~~~~-~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      .++++.. .+.+|.||+++  +++|||+|+..++|.+++.+|...+++.........|+||+++++
T Consensus       548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~  613 (791)
T 3m0c_C          548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED  613 (791)
T ss_dssp             CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT
T ss_pred             ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC
Confidence            9887765 78999999998  899999999999999999999988877654445779999999865

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=100.00  E-value=1.1e-30  Score=209.99  Aligned_cols=210  Identities=21%  Similarity=0.434  Sum_probs=177.9

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCc-eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEeCCCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKN-VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVSKDLVN   88 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~   88 (232)
                      .-.|++++-  + .|.++++++.. ...++..++..+.+|++|+..+.|||+|...++|++++++|... ..++...+..
T Consensus         4 ~p~ll~~~~--~-~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~   80 (318)
T 3sov_A            4 APLLLYANR--R-DLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS   80 (318)
T ss_dssp             CCEEEEECE--E-EEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred             ccEEEEEcc--C-eEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence            346777773  3 79999999874 22344445678889999988899999999999999999999853 4555567889


Q ss_pred             ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC-CCcEEEEecCCCce
Q psy5751          89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD-SKSLECMTIRNRVR  167 (232)
Q Consensus        89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~-~~~i~~~~~~g~~~  167 (232)
                      |.|+|+|+.++.|||+|..  ..+|.+++++|...+++.... +..|++|++|+.+++|||+|.. .++|++++++|..+
T Consensus        81 p~glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~-~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~  157 (318)
T 3sov_A           81 PDGLACDWLGEKLYWTDSE--TNRIEVSNLDGSLRKVLFWQE-LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR  157 (318)
T ss_dssp             CCEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSS-CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             ccEEEEEcCCCeEEEEECC--CCEEEEEECCCCcEEEEEeCC-CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence            9999999989999999986  568999999999888887665 8999999999988999999976 68999999999888


Q ss_pred             EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         168 RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       168 ~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +.+. ..+..|.||+++  +++|||+|+.+++|++++.+|+..+++..  .....|+||+++++
T Consensus       158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~--~~~~~P~glav~~~  219 (318)
T 3sov_A          158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED  219 (318)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SCCSCEEEEEEETT
T ss_pred             EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec--CCCCCceEEEEeCC
Confidence            7775 578999999997  78999999999999999999988876653  34789999999865

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.97  E-value=5.4e-28  Score=189.63  Aligned_cols=207  Identities=26%  Similarity=0.497  Sum_probs=172.6

Q ss_pred             CEEEEEEcCCCCcEEEEEcCCCcee-----EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCC
Q psy5751          12 GQVYYSSVADKSSIKRAHLDGKNVE-----DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDL   86 (232)
Q Consensus        12 ~~ly~~d~~~~~~i~~~~~~g~~~~-----~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~   86 (232)
                      ..||+++.  + +|++++++|...+     .++......|.++++|+.++.|||+|...++|++++++|.....+....+
T Consensus         2 ~~l~~~~~--~-~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~   78 (267)
T 1npe_A            2 THLLFAQT--G-KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL   78 (267)
T ss_dssp             EEEEEEEE--E-EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred             cEEEEEcC--C-eEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence            46888884  3 8999999986532     23333346899999999889999999999999999999988777776677


Q ss_pred             CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecCC
Q psy5751          87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIRN  164 (232)
Q Consensus        87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~g  164 (232)
                      ..|.++++|+.++.|||++..  .++|.+++++|...+.+.... +..|+++++|+.+++|||++..  .++|++++++|
T Consensus        79 ~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg  155 (267)
T 1npe_A           79 GSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG  155 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred             CCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCEEEEEECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence            899999999988999999976  568999999998877776654 7899999999988999999987  67999999999


Q ss_pred             CceEEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751         165 RVRRKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       165 ~~~~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      ...+.+. ..+..|.|++++  +++|||++..+++|.+++++|...+.+.   .+...|.||++..
T Consensus       156 ~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~---~~~~~P~gi~~d~  218 (267)
T 1npe_A          156 TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL---EGLQYPFAVTSYG  218 (267)
T ss_dssp             CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE---ECCCSEEEEEEET
T ss_pred             CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe---cCCCCceEEEEeC
Confidence            8777665 467889999997  5799999999999999999976555442   2456899999864

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=99.95  E-value=5.4e-28  Score=212.74  Aligned_cols=209  Identities=18%  Similarity=0.369  Sum_probs=171.0

Q ss_pred             EEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC----CCCEEEEeCCCCC
Q psy5751          13 QVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND----DQPKVIVSKDLVN   88 (232)
Q Consensus        13 ~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g----~~~~~~~~~~~~~   88 (232)
                      .|++++.  . .|+++++++.....+ ...+..|.+|++|+..+.|||+|...++|+++++++    .....++...+..
T Consensus       379 ~ll~~~~--~-~I~~id~~~~~~~~~-~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~  454 (699)
T 1n7d_A          379 YLFFTNR--H-EVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA  454 (699)
T ss_dssp             CBCCCCT--T-C-CEECTTSCCEECC-SCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--
T ss_pred             eEEecCc--c-ceEEEeCCCCcceee-eccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCC
Confidence            4555443  3 788999988765333 345689999999998999999999999999999997    4444555556788


Q ss_pred             ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCce
Q psy5751          89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVR  167 (232)
Q Consensus        89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~  167 (232)
                      |.+||+|+.++.|||++..  .++|.+++++|....+++... +..|++|++|+.+++|||+|... ++|++++++|..+
T Consensus       455 P~glavD~~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~  531 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  531 (699)
T ss_dssp             CCCEECCCSSSBCEECCTT--TSCEEEEBSSSCCEEEECCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC
T ss_pred             cceEEEEeeCCcEEEEecc--CCeEEEEecCCCceEEEEeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe
Confidence            9999999889999999976  567999999999888777655 88999999999889999999876 8999999999888


Q ss_pred             EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         168 RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       168 ~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +++. ..+..|.|||++  +++|||+|+.+++|.+++.+|...+++.........|+||+++.+
T Consensus       532 ~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~  595 (699)
T 1n7d_A          532 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED  595 (699)
T ss_dssp             CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT
T ss_pred             eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC
Confidence            7775 478999999996  689999999999999999999887766543344678999999864

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=2.5e-24  Score=179.81  Aligned_cols=221  Identities=11%  Similarity=0.118  Sum_probs=171.7

Q ss_pred             CeEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCC----eEEEEeCCC
Q psy5751           1 MLIGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMD----TISMANLND   75 (232)
Q Consensus         1 ~~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~----~I~~~~~~g   75 (232)
                      .|.++++|+ .++.||++|.. + +|+++++++.....+. .....|.+|++|+.++.||++|...+    .++..+.+|
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~-~-~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g  214 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQ-H-PTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES  214 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBT-E-EEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred             CCCEEEECCCCCCeEEEEeCC-C-cEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence            478999998 58999999987 6 8999999987765554 46789999999998788999998543    577788888


Q ss_pred             CCC--EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          76 DQP--KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        76 ~~~--~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ...  ..+.  .+..|.+++++|.++.||++++.  .++|+++++++.....+........|++|++|+++++|||+|..
T Consensus       215 ~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~--~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~  290 (430)
T 3tc9_A          215 GFKVITELT--KGQNCNGAETHPINGELYFNSWN--AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN  290 (430)
T ss_dssp             TSCSEEEEE--ECSSCCCEEECTTTCCEEEEETT--TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred             ceeeeeeec--cCCCceEEEEeCCCCEEEEEECC--CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence            765  3333  47889999999988999999986  57899999998765444443325689999999997789999999


Q ss_pred             CCcEEEEecCCCc-----eEEEec---------------CCCceE-EEEEE---------CCEEEEEeCCCCcEEEEeCC
Q psy5751         154 SKSLECMTIRNRV-----RRKVYS---------------NCTYPF-GLSIT---------DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       154 ~~~i~~~~~~g~~-----~~~~~~---------------~~~~p~-gla~~---------~~~ly~td~~~~~i~~~~~~  203 (232)
                      .++|+++++++..     ...++.               .+..|. |++++         ++.|||+|+.+++|.+++++
T Consensus       291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~  370 (430)
T 3tc9_A          291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ  370 (430)
T ss_dssp             TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT
T ss_pred             CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC
Confidence            9999999998742     222321               367799 89885         36999999999999999988


Q ss_pred             CCCcceEEec-----c---------CCcceeEEEEEEcC
Q psy5751         204 GERAPSIALD-----M---------MGTTYMYGIAAVPS  228 (232)
Q Consensus       204 g~~~~~i~~~-----~---------~~~~~p~gi~~~~~  228 (232)
                      |...+.....     .         .....|.||++.++
T Consensus       371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~  409 (430)
T 3tc9_A          371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEE  409 (430)
T ss_dssp             SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETT
T ss_pred             CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECC
Confidence            7443333210     0         01457999999873

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=99.93  E-value=2e-24  Score=171.92  Aligned_cols=187  Identities=13%  Similarity=0.207  Sum_probs=152.4

Q ss_pred             EEEeCCCCEEEEEE---cCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           5 ITVDCVEGQVYYSS---VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         5 i~~d~~~~~ly~~d---~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+...+++|||++   .... .|++++++|+..+++.....     ++++|.++.|||++.....|++++++|..++.+
T Consensus       109 ~~~s~~g~~Iy~~~~~~~~~~-~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l  182 (302)
T 3s25_A          109 IYASLIGNYIYYLHYDTQTAT-SLYRIRIDGEEKKKIKNHYL-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALF  182 (302)
T ss_dssp             EEEEEETTEEEEEEESSSSCE-EEEEEETTSCCCEEEESSCC-----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEE
T ss_pred             cEEEEeCCEEEEEeecCCCCc-eEEEEECCCCCeEEEeCCCc-----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEE
Confidence            34556789999999   4445 89999999998776665432     457888999999999888999999999988777


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE-ECCCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV-DADSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~-d~~~~~i~~~  160 (232)
                      ..    .+...+++|..+.|||+++.. ..+|++++++|...+++.... +  |   .+++.+++|||+ +...+.|+++
T Consensus       183 ~~----~~~~~~~~P~g~~iy~t~~~~-~~~I~~~~ldG~~~~~Lt~~~-~--~---~~~~~g~~Iy~~~~~~~~~i~~~  251 (302)
T 3s25_A          183 YD----CNCYKPVVLDDTNVYYMDVNR-DNAIVHVNINNPNPVVLTEAN-I--E---HYNVYGSLIFYQRGGDNPALCVV  251 (302)
T ss_dssp             EC----SCEEEEEEEETTEEEEEEGGG-TTEEEEECSSSCCCEECSCSC-E--E---EEEEETTEEEEEECSSSCEEEEE
T ss_pred             eC----CCccceeeecCCEEEEEEcCC-CcEEEEEECCCCCeEEEeCCC-c--c---eEEECCCEEEEEECCCCcEEEEE
Confidence            64    233456777899999999874 479999999999988876553 3  3   477878999998 5556899999


Q ss_pred             ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceE
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSI  210 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i  210 (232)
                      ++||+.++.+...  ...++++++++|||+++..+.|.+++.+|+..+++
T Consensus       252 ~~DG~~r~~l~~~--~~~~i~i~~d~Iy~td~~~~~i~~~~~dGs~~~~l  299 (302)
T 3s25_A          252 KNDGTGFKELAKG--EFCNINVTSQYVYFTDFVSNKEYCTSTQNPDTIKA  299 (302)
T ss_dssp             ETTSCCCEEEEES--CEEEEEECSSEEEEEETTTCCEEEEESSSCCSCEE
T ss_pred             ECCCCccEEeeCC--ccceEEEeCCEEEEEECCCCeEEEEECCCCCceEe
Confidence            9999988888654  24578899999999999999999999999887765

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.93  E-value=5.3e-23  Score=170.80  Aligned_cols=221  Identities=14%  Similarity=0.120  Sum_probs=169.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCC-eEEEEeCCCCCCE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMD-TISMANLNDDQPK   79 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~-~I~~~~~~g~~~~   79 (232)
                      .|.++++|+ ++.|||+|..++ +|+++++++.....+... ...|. +++++.++.||+++...+ +|++++.++....
T Consensus       132 ~P~~la~d~-~g~lyv~d~~~~-~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~  207 (409)
T 3hrp_A          132 YMWGIAAVG-NNTVLAYQRDDP-RVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP  207 (409)
T ss_dssp             CEEEEEECS-TTEEEEEETTTT-EEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred             CceEEEEeC-CCCEEEEecCCC-cEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence            488999996 778999999888 999999998776566554 45677 999999999999998654 8999999887653


Q ss_pred             EEE----eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE----cCCCCCcc-eEEEeCCCCEEEEE
Q psy5751          80 VIV----SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK----AADLKLPN-SLAVDFRTDELCWV  150 (232)
Q Consensus        80 ~~~----~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~----~~~~~~p~-~l~~d~~~~~Ly~~  150 (232)
                      ...    ......|++++++|.++.||+++.   .++|+++++++.....+..    ......|. +|++|+.+++||++
T Consensus       208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~  284 (409)
T 3hrp_A          208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDS---NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS  284 (409)
T ss_dssp             EEEEECCTTSCSCCCBCEECTTSSEEEEECT---TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred             EEeeeccchhcCCcEEEEEeCCCCeEEEEEC---CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence            333    225678999999998899999874   4689999998776555421    11122355 99999988999999


Q ss_pred             ECCCCcEEEEecCCCceEEEecC--------------CCceEEEEEE-CCEEEEEeC-CCCcEEEEe-CCCCCcceEEec
Q psy5751         151 DADSKSLECMTIRNRVRRKVYSN--------------CTYPFGLSIT-DEKYYWTDW-KTNRIESAN-KEGERAPSIALD  213 (232)
Q Consensus       151 d~~~~~i~~~~~~g~~~~~~~~~--------------~~~p~gla~~-~~~ly~td~-~~~~i~~~~-~~g~~~~~i~~~  213 (232)
                      |...++|++++.+|.........              +..|.|++++ ++.||++|+ .+++|.+++ ++|. ...+.-.
T Consensus       285 d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~  363 (409)
T 3hrp_A          285 DQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQ  363 (409)
T ss_dssp             ETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEEC
T ss_pred             eCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCC
Confidence            99999999999998733333222              6789999997 678999999 999999999 5554 3333221


Q ss_pred             --c----------CCcceeEEEEEEcCC
Q psy5751         214 --M----------MGTTYMYGIAAVPSS  229 (232)
Q Consensus       214 --~----------~~~~~p~gi~~~~~~  229 (232)
                        .          .....|.||++.++.
T Consensus       364 ~~~~g~~~g~~~~~~~~~P~giavd~~g  391 (409)
T 3hrp_A          364 VDVASQIDGTPLEATFNYPYDICYDGEG  391 (409)
T ss_dssp             TTCBSCCCBSTTTCCBSSEEEEEECSSS
T ss_pred             CCCCCcCCCChhceEeCCceEEEEcCCC
Confidence              0          114679999998764

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=99.93  E-value=2.9e-23  Score=173.36  Aligned_cols=219  Identities=11%  Similarity=0.071  Sum_probs=164.4

Q ss_pred             CeEEEEEeC--CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC----CeEEEEeCC
Q psy5751           1 MLIGITVDC--VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM----DTISMANLN   74 (232)
Q Consensus         1 ~~~~i~~d~--~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~   74 (232)
                      .|.++++|+  .++.|||+|.. + +|+++++.+.....+. ..+..|.+|++|+.++ ||++|..+    ..+...+.+
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~-~-~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~  215 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQR-D-AFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA  215 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBT-S-CEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred             CCceEEEccccCCCEEEEEeCC-C-CEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence            378999998  47999999988 6 8999999766654443 4678899999999666 99999753    236666666


Q ss_pred             CCCC-EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          75 DDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        75 g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      +... ...+. .+..|.++++|+.++.|||++..  .++|++++.++... ..+........+.+|++|+++++||++|.
T Consensus       216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~--~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~  292 (433)
T 4hw6_A          216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH--HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN  292 (433)
T ss_dssp             GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT--CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred             CCeecccccc-ccCCCCEEEEeCCCCeEEEEECC--CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence            6553 22232 57899999999989999999976  57899999984444 44444322456778999999888999999


Q ss_pred             CCCcEEEEecCCCc-----eEEEec---------------CCCceEEEEE---------E-CCEEEEEeCCCCcEEEEeC
Q psy5751         153 DSKSLECMTIRNRV-----RRKVYS---------------NCTYPFGLSI---------T-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       153 ~~~~i~~~~~~g~~-----~~~~~~---------------~~~~p~gla~---------~-~~~ly~td~~~~~i~~~~~  202 (232)
                      ..++|+++++++..     ...++.               .+..|.|+++         + ++.||++|+.+++|.++++
T Consensus       293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~  372 (433)
T 4hw6_A          293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP  372 (433)
T ss_dssp             TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred             CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence            99999999988431     123322               3678999999         5 6899999999999999999


Q ss_pred             CCCCcceEEecc--------------CCcceeEEEEEE
Q psy5751         203 EGERAPSIALDM--------------MGTTYMYGIAAV  226 (232)
Q Consensus       203 ~g~~~~~i~~~~--------------~~~~~p~gi~~~  226 (232)
                      +|...+..-...              .....|.|||+.
T Consensus       373 ~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd  410 (433)
T 4hw6_A          373 EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYD  410 (433)
T ss_dssp             TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEE
T ss_pred             CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEE
Confidence            874333221100              124579999998

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.90  E-value=8.6e-22  Score=153.74  Aligned_cols=218  Identities=17%  Similarity=0.261  Sum_probs=163.2

Q ss_pred             CeEEEEEeCCCCEEEE-EEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           1 MLIGITVDCVEGQVYY-SSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~-~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .|.++++++ ++.||+ ++...+ .|.+++..+.............|.+|++|+. +.||+++. .+.|.+++.++....
T Consensus        25 ~p~~i~~~~-~g~l~v~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~~~d~~~~~~~  100 (270)
T 1rwi_B           25 SPSGVAVDS-AGNVYVTSEGMYG-RVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF-NNRVVTLAAGSNNQT  100 (270)
T ss_dssp             CEEEEEECT-TCCEEEEECSSSC-EEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET-TTEEEEECTTCSCCE
T ss_pred             CccceEECC-CCCEEEEccCCCC-cEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC-CCEEEEEeCCCceEe
Confidence            478999998 556999 888777 8999987765433322334578999999984 56999998 789999999987765


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      .+....+..|.++++++ +|.||+++..  .+.|.+++............. +..|++|++|++ ++||+++...+.|.+
T Consensus       101 ~~~~~~~~~p~~i~~~~-~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~-g~l~v~~~~~~~i~~  175 (270)
T 1rwi_B          101 VLPFDGLNYPEGLAVDT-QGAVYVADRG--NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNS-GNVYVTDTDNNRVVK  175 (270)
T ss_dssp             ECCCCSCSSEEEEEECT-TCCEEEEEGG--GTEEEEECTTCCSCEECCCCS-CCSCCCEEECTT-CCEEEEEGGGTEEEE
T ss_pred             eeecCCcCCCcceEECC-CCCEEEEECC--CCEEEEEECCCceeEeecccc-CCCceeEEEeCC-CCEEEEECCCCEEEE
Confidence            54434567899999998 7889999865  457888865443333222222 568999999996 679999998899999


Q ss_pred             EecCCCceEEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         160 MTIRNRVRRKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       160 ~~~~g~~~~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ++.++...... ...+..|.+|+++ ++.||+++..+++|.++++++.....  ....+...|.+|++.+++
T Consensus       176 ~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~--~~~~~~~~p~~i~~~~~g  245 (270)
T 1rwi_B          176 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV--LPFTGLNTPLAVAVDSDR  245 (270)
T ss_dssp             ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE--CCCCSCSCEEEEEECTTC
T ss_pred             EecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee--eccCCCCCceeEEECCCC
Confidence            99998765443 2356889999997 56999999999999999998765543  222345689999998764

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.90  E-value=3.8e-21  Score=151.60  Aligned_cols=222  Identities=14%  Similarity=0.222  Sum_probs=172.1

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-----CCCCCccEEEEeecCCeEEEEeCC-CCeEEEEeCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-----TNIRSPEGLTFDWVNRVLYWTDSQ-MDTISMANLN   74 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-----~~~~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~   74 (232)
                      .|.++++++ ++.||+++..++ +|.+++.++.....+..     ..+..|.+++++...+.||+++.. ++.|.+.+.+
T Consensus        31 ~p~~v~~~~-~g~l~v~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~  108 (286)
T 1q7f_A           31 EPSGVAVNA-QNDIIVADTNNH-RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY  108 (286)
T ss_dssp             CEEEEEECT-TCCEEEEEGGGT-EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred             CCceEEECC-CCCEEEEECCCC-EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC
Confidence            378999998 567999998888 99999998765433322     124689999997558899999975 7899999988


Q ss_pred             CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      |.....+.......|.++++++ +|.||+++..  .++|.+.+.++.....+.....+..|++|++|++ ++||+++...
T Consensus       109 g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~  184 (286)
T 1q7f_A          109 GQFVRKFGATILQHPRGVTVDN-KGRIIVVECK--VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRA  184 (286)
T ss_dssp             SCEEEEECTTTCSCEEEEEECT-TSCEEEEETT--TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEEEEEEGGG
T ss_pred             CcEEEEecCccCCCceEEEEeC-CCCEEEEECC--CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC-CCEEEEECCC
Confidence            7655444334567899999998 6789999865  4679999988765554433223678999999997 7899999999


Q ss_pred             CcEEEEecCCCceEEEec--CCCceEEEEEE-CCEEEEEeCCCC-cEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         155 KSLECMTIRNRVRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTN-RIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~-~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ++|.+++.+|.....+..  .+..|.+|+++ +++||+++..++ +|.+++++|...+.+.... ....|.+|++.+++
T Consensus       185 ~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~g  262 (286)
T 1q7f_A          185 HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV-KHAQCFDVALMDDG  262 (286)
T ss_dssp             TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS-CCSCEEEEEEETTT
T ss_pred             CEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccC-CCCcceeEEECCCC
Confidence            999999998876665643  35789999997 789999999886 9999999887766665422 23468999988754

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=4.1e-21  Score=161.09  Aligned_cols=222  Identities=10%  Similarity=0.107  Sum_probs=168.5

Q ss_pred             eEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC---CCCCccEEEE-------eecCCeEEEEeCCCC----
Q psy5751           2 LIGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVITT---NIRSPEGLTF-------DWVNRVLYWTDSQMD----   66 (232)
Q Consensus         2 ~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~---~~~~p~gl~~-------d~~~~~ly~~d~~~~----   66 (232)
                      |.+|++|+ ..+.||+++...+ +|+++++++.....+...   .+..|.+|++       |..++.||++|...+    
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~-~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHK-AIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEE-EEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCEEEEccCCCCEEEEEECCCC-eEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            78999998 4899999998877 899999998887776653   2457999999       987788999998862    


Q ss_pred             --eEEEEeCCC--CCCE----EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-------CCCc--------
Q psy5751          67 --TISMANLND--DQPK----VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-------GTDR--------  123 (232)
Q Consensus        67 --~I~~~~~~g--~~~~----~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-------g~~~--------  123 (232)
                        .|+.++.+.  ....    ..+. .+.+|.+++++|.++.||+++..  .++|++++++       +...        
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~--~g~V~r~d~~~~~~~~~tg~~~tp~~~~~  296 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYE--KGQVFRLDLVDYFKTIKNGGSWDPIVKNN  296 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETT--TTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred             CceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECC--CCEEEEEecccccccccCceeeccccccc
Confidence              477775443  5431    2333 46799999999989999999987  5689999987       3332        


Q ss_pred             ----EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-----EEEec---------------CCCceE-
Q psy5751         124 ----EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-----RKVYS---------------NCTYPF-  178 (232)
Q Consensus       124 ----~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-----~~~~~---------------~~~~p~-  178 (232)
                          ..+........|.+|+++++++.||++|..+++|+++++++...     .+++.               ++..|. 
T Consensus       297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~  376 (496)
T 3kya_A          297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ  376 (496)
T ss_dssp             TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred             ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence                23333322567999999999778999999999999999987531     33321               457899 


Q ss_pred             EEEEE--------CCEEEEEeCCCCcEEEEeCCCCCcceEEecc---------------------CCcceeEEEEEEcC
Q psy5751         179 GLSIT--------DEKYYWTDWKTNRIESANKEGERAPSIALDM---------------------MGTTYMYGIAAVPS  228 (232)
Q Consensus       179 gla~~--------~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~---------------------~~~~~p~gi~~~~~  228 (232)
                      |++++        ++.||++|+.+++|++++++|. .+++.-..                     .....|.||++.++
T Consensus       377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~  454 (496)
T 3kya_A          377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV  454 (496)
T ss_dssp             EEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred             EEEEccccccccCCCeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence            88885        5799999999999999998884 33333210                     02467999999875

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.89  E-value=1.9e-20  Score=150.98  Aligned_cols=224  Identities=17%  Similarity=0.212  Sum_probs=164.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCC-----------------------CcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCe
Q psy5751           2 LIGITVDCVEGQVYYSSVADK-----------------------SSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRV   57 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~-----------------------~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~   57 (232)
                      |.++++++ ++.||+++..++                       +.|++++.+......... ..+..|.+|++|+ .++
T Consensus        26 v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-~g~  103 (329)
T 3fvz_A           26 VSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-DGN  103 (329)
T ss_dssp             EEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT-TSC
T ss_pred             ceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC-CCC
Confidence            67999998 678999998773                       158888887433323332 3467999999998 556


Q ss_pred             EEEEeCCCCeEEEEeCCCCC--CEEEE--------eCCCCCceEEEEeCCCCeEEEEEc-CCCCCcEEEEeCCCCCcEEE
Q psy5751          58 LYWTDSQMDTISMANLNDDQ--PKVIV--------SKDLVNPRGIVVHPYYRKLFWSDW-NRSGPKIEWSNLDGTDREIF  126 (232)
Q Consensus        58 ly~~d~~~~~I~~~~~~g~~--~~~~~--------~~~~~~p~~iavd~~~~~ly~~d~-~~~~~~I~~~~~~g~~~~~~  126 (232)
                      ||++|..+++|.+++.+|..  ...+.        ...+..|.++++++.++.||+++. .  .++|.+.+.+|.....+
T Consensus       104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~--~~~I~~~~~~g~~~~~~  181 (329)
T 3fvz_A          104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC--NSRIVQFSPSGKFVTQW  181 (329)
T ss_dssp             EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS--CCEEEEECTTSCEEEEE
T ss_pred             EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC--CCeEEEEcCCCCEEEEe
Confidence            99999999999999999973  44443        245668999999987899999995 4  57899999888766655


Q ss_pred             EEcC--------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecC-CCceEEEec--CCCceEEEEEE-------CCEEE
Q psy5751         127 LKAA--------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIR-NRVRRKVYS--NCTYPFGLSIT-------DEKYY  188 (232)
Q Consensus       127 ~~~~--------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~-g~~~~~~~~--~~~~p~gla~~-------~~~ly  188 (232)
                      ....        .+..|.+|++|+++++||++|..+++|.+++.+ |.....+..  ....|.++++.       ++.+|
T Consensus       182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~  261 (329)
T 3fvz_A          182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY  261 (329)
T ss_dssp             CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC
T ss_pred             ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE
Confidence            3221        245699999999889999999999999999998 665555532  33456655553       44455


Q ss_pred             EEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         189 WTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       189 ~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +++....+|..++.. |+....+.........|.+|++.+++
T Consensus       262 v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG  303 (329)
T 3fvz_A          262 FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG  303 (329)
T ss_dssp             TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS
T ss_pred             eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC
Confidence            556666789999965 54444332222456789999997764

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.89  E-value=6.1e-21  Score=158.40  Aligned_cols=193  Identities=18%  Similarity=0.171  Sum_probs=149.3

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE----eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI----TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~----~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      +++++..+.||+++.....+|++++..+......+    ......|.++++|+.++.||+++. +++|+++++++.....
T Consensus       176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~  254 (409)
T 3hrp_A          176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTL  254 (409)
T ss_dssp             CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEE
T ss_pred             eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEE
Confidence            78899889999999854327999998865543333    224578999999998899999876 6799999998776544


Q ss_pred             EEe-----CCCCCce-EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-------------CCCCcceEEEe
Q psy5751          81 IVS-----KDLVNPR-GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-------------DLKLPNSLAVD  141 (232)
Q Consensus        81 ~~~-----~~~~~p~-~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-------------~~~~p~~l~~d  141 (232)
                      +..     .....|. +++++|.++.||+++..  .++|++++.++. ...+....             .+..|++|++|
T Consensus       255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d  331 (409)
T 3hrp_A          255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVD  331 (409)
T ss_dssp             EEECCCCSCCCCSSCCEEEEETTTTEEEEEETT--TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC
T ss_pred             EecccccCCCCCCccccEEEeCCCCEEEEEeCC--CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe
Confidence            421     1223466 99999978999999976  678999999987 33333221             15679999999


Q ss_pred             CCCCEEEEEEC-CCCcEEEEecCCCceEEEecC---------------CCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         142 FRTDELCWVDA-DSKSLECMTIRNRVRRKVYSN---------------CTYPFGLSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       142 ~~~~~Ly~~d~-~~~~i~~~~~~g~~~~~~~~~---------------~~~p~gla~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      ++ +.||++|. .+++|.++++..+....+...               +..|.||+++ ++.||++|+.+++|.++..
T Consensus       332 ~d-G~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          332 ED-GNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             TT-CCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CC-CCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            98 66999999 999999999554455555432               6789999997 5999999999999999875

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=99.89  E-value=5.1e-21  Score=159.74  Aligned_cols=200  Identities=15%  Similarity=0.112  Sum_probs=152.5

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCcee-EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVE-DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~-~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .|.++++++..+.||++|...+   ..+..+..+|.... ..+. .+..|.++++|+..+.|||+|..+++|+++++++.
T Consensus       180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~  258 (430)
T 3tc9_A          180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ  258 (430)
T ss_dssp             CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred             CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence            3789999998888999998543   14666777765431 2222 46899999999988899999999999999999987


Q ss_pred             CCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-----cEEEEEc-------------CCCCCcc-
Q psy5751          77 QPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-----REIFLKA-------------ADLKLPN-  136 (232)
Q Consensus        77 ~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-----~~~~~~~-------------~~~~~p~-  136 (232)
                      ....+.. .....|++|+++|..++||+++..  .++|++++.++..     ...+...             ..+..|. 
T Consensus       259 ~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~  336 (430)
T 3tc9_A          259 ETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN--QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQ  336 (430)
T ss_dssp             EEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEE
T ss_pred             cEEEEEEcCCCCcceeEEEcCCCCEEEEEECC--CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcc
Confidence            6534443 344679999999977779999976  6789999888752     2233321             1256788 


Q ss_pred             eEEEeC-------CCCEEEEEECCCCcEEEEecCCCceEEEec-----------------CCCceEEEEEE--CCEEEEE
Q psy5751         137 SLAVDF-------RTDELCWVDADSKSLECMTIRNRVRRKVYS-----------------NCTYPFGLSIT--DEKYYWT  190 (232)
Q Consensus       137 ~l~~d~-------~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-----------------~~~~p~gla~~--~~~ly~t  190 (232)
                      +++++.       ..+.||++|..+++|.+++.+|.-......                 ++..|.||+++  ++.||++
T Consensus       337 gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa  416 (430)
T 3tc9_A          337 GTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIG  416 (430)
T ss_dssp             EEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEE
T ss_pred             eEEEccccccccCCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEE
Confidence            899963       358999999999999999988743333321                 25689999998  4899999


Q ss_pred             eCCCCcEEEEeCC
Q psy5751         191 DWKTNRIESANKE  203 (232)
Q Consensus       191 d~~~~~i~~~~~~  203 (232)
                      |..+++|.+++++
T Consensus       417 D~~n~rIr~i~~e  429 (430)
T 3tc9_A          417 DRENRRIRKIGYE  429 (430)
T ss_dssp             EGGGTEEEEEEEC
T ss_pred             ECCCCeEEEEccC
Confidence            9999999999865

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.89  E-value=3.9e-21  Score=154.50  Aligned_cols=218  Identities=12%  Similarity=0.118  Sum_probs=162.9

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-------------------CCCccEEEEeecCCeEEEEe
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-------------------IRSPEGLTFDWVNRVLYWTD   62 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-------------------~~~p~gl~~d~~~~~ly~~d   62 (232)
                      |.++++|+ ++.++|++..++ +|++++.++...+.+....                   ...|.||++|+..+.||++|
T Consensus        21 p~~i~~d~-~g~~l~v~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d   98 (322)
T 2fp8_A           21 PNSFTFDS-TNKGFYTSVQDG-RVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD   98 (322)
T ss_dssp             CCCEECCT-TCSSEEEECTTS-EEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred             ceEEEEcC-CCCEEEEEcCCC-eEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence            67899998 477777888878 9999998876554433211                   24699999997568999999


Q ss_pred             CCCCeEEEEeCCCCCCEEEEe----CCCCCceEEEEeCCCCeEEEEEcCC---------------CCCcEEEEeCCCCCc
Q psy5751          63 SQMDTISMANLNDDQPKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR---------------SGPKIEWSNLDGTDR  123 (232)
Q Consensus        63 ~~~~~I~~~~~~g~~~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~---------------~~~~I~~~~~~g~~~  123 (232)
                      .. +.|.+++.++...+.+..    ..+..|+++++++.+|.||+++...               ..+.|++++.++...
T Consensus        99 ~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~  177 (322)
T 2fp8_A           99 CY-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET  177 (322)
T ss_dssp             TT-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred             CC-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence            77 458999988655555442    1346799999997468999999652               236799998876655


Q ss_pred             EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC---ceEEEecCCCceEEEEEE-CCEEEEEeCC------
Q psy5751         124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR---VRRKVYSNCTYPFGLSIT-DEKYYWTDWK------  193 (232)
Q Consensus       124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~---~~~~~~~~~~~p~gla~~-~~~ly~td~~------  193 (232)
                      ..+...  +..|+||+++++++.||++|...++|+++++++.   ..+.+.. +..|.|++++ +|+||++++.      
T Consensus       178 ~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~gP~gi~~d~~G~l~va~~~~~~~~~  254 (322)
T 2fp8_A          178 TLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPNPGNIKRNADGHFWVSSSEELDGNM  254 (322)
T ss_dssp             EEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSSEEEEEECTTSCEEEEEEEETTSST
T ss_pred             EEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCCCCCeEECCCCCEEEEecCcccccc
Confidence            555544  7899999999997889999999999999999863   3444443 2239999997 6799999976      


Q ss_pred             ----CCcEEEEeCCCCCcceEEeccCC-cceeEEEEE
Q psy5751         194 ----TNRIESANKEGERAPSIALDMMG-TTYMYGIAA  225 (232)
Q Consensus       194 ----~~~i~~~~~~g~~~~~i~~~~~~-~~~p~gi~~  225 (232)
                          .++|.+++++|+..+.+..+... ...|.+++.
T Consensus       255 ~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~  291 (322)
T 2fp8_A          255 HGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE  291 (322)
T ss_dssp             TSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE
T ss_pred             cCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE
Confidence                57899999998877777654322 456666654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=99.88  E-value=1.9e-20  Score=156.38  Aligned_cols=197  Identities=15%  Similarity=0.071  Sum_probs=147.6

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADK---SSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .|.++++++..+ ||++|....   ..+..+...+... ...+. .+..|.++++|+..+.|||+|..+++|++++.++.
T Consensus       183 ~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g  260 (433)
T 4hw6_A          183 QCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG  260 (433)
T ss_dssp             CEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred             CccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence            378999999666 999997542   1356565554332 12333 46899999999988999999999999999999844


Q ss_pred             CC-EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-----cEEEEEc-------------CCCCCcc
Q psy5751          77 QP-KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-----REIFLKA-------------ADLKLPN  136 (232)
Q Consensus        77 ~~-~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-----~~~~~~~-------------~~~~~p~  136 (232)
                      .. ..+.. .....+.+|+++|..+.||+++..  .++|+++++++..     ...+...             ..+..|.
T Consensus       261 ~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~  338 (433)
T 4hw6_A          261 TLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG--KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPN  338 (433)
T ss_dssp             CEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEE
T ss_pred             eEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCc
Confidence            33 44443 334456789999977789999976  6789999887532     2233322             1267899


Q ss_pred             eEEE---------eCCCCEEEEEECCCCcEEEEecCCCceEEEec------------------CCCceEEEEEE--CCEE
Q psy5751         137 SLAV---------DFRTDELCWVDADSKSLECMTIRNRVRRKVYS------------------NCTYPFGLSIT--DEKY  187 (232)
Q Consensus       137 ~l~~---------d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~------------------~~~~p~gla~~--~~~l  187 (232)
                      ++++         |. .+.||++|..+++|.+++.+|. ..+++.                  ++.+|.||+++  ++.|
T Consensus       339 giav~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~~~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l  416 (433)
T 4hw6_A          339 QGIFVKNEAYAGEED-EYDFYFCDRDSHTVRVLTPEGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCF  416 (433)
T ss_dssp             EEEEEECGGGTTSSC-CEEEEEEETTTTEEEEECTTSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred             cEEEEccccccccCC-CCcEEEEECCCCEEEEECCCCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEE
Confidence            9999         55 5899999999999999998873 333321                  36779999998  7899


Q ss_pred             EEEeCCCCcEEEEeCC
Q psy5751         188 YWTDWKTNRIESANKE  203 (232)
Q Consensus       188 y~td~~~~~i~~~~~~  203 (232)
                      |++|+.+++|.++++.
T Consensus       417 yVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          417 YIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             EEEEGGGTEEEEEEEC
T ss_pred             EEEeCCCCEEEEEecC
Confidence            9999999999998764

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.87  E-value=1.2e-19  Score=144.22  Aligned_cols=212  Identities=15%  Similarity=0.139  Sum_probs=160.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ++|..|++.++.|||+|...+ +|++++.++...... .. ...|.++++++.++ ||++.  .+.|++++.++...+.+
T Consensus        15 ~Egp~w~~~~~~l~~~d~~~~-~i~~~d~~~~~~~~~-~~-~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~~~~   88 (297)
T 3g4e_A           15 GESPVWEEVSNSLLFVDIPAK-KVCRWDSFTKQVQRV-TM-DAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSAVVL   88 (297)
T ss_dssp             EEEEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEE-EC-SSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEEEEE
T ss_pred             ccCCeEECCCCEEEEEECCCC-EEEEEECCCCcEEEE-eC-CCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcEEEE
Confidence            679999999999999999998 999999997665333 22 25799999998554 87776  36899999987655555


Q ss_pred             EeC----CCCCceEEEEeCCCCeEEEEEcCC---------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEE
Q psy5751          82 VSK----DLVNPRGIVVHPYYRKLFWSDWNR---------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        82 ~~~----~~~~p~~iavd~~~~~ly~~d~~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly  148 (232)
                      ...    ....|+++++|+ +|.||+++...         ..+.|++++.++.. ..+...  +..|+|++++++++.||
T Consensus        89 ~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~--~~~pngi~~spdg~~ly  164 (297)
T 3g4e_A           89 ATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQ--VDISNGLDWSLDHKIFY  164 (297)
T ss_dssp             EECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEE--ESBEEEEEECTTSCEEE
T ss_pred             EecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeec--cccccceEEcCCCCEEE
Confidence            542    245689999998 77899987532         24579999887643 333333  67899999999988999


Q ss_pred             EEECCCCcEEEEecC---CC--ceEEEec---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcc
Q psy5751         149 WVDADSKSLECMTIR---NR--VRRKVYS---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTT  218 (232)
Q Consensus       149 ~~d~~~~~i~~~~~~---g~--~~~~~~~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~  218 (232)
                      |++...++|++++++   |.  .++.+..   ....|.|++++ +++||++.+..++|.+++++ |+....+..+.   .
T Consensus       165 v~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~---~  241 (297)
T 3g4e_A          165 YIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV---D  241 (297)
T ss_dssp             EEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS---S
T ss_pred             EecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC---C
Confidence            999999999999874   22  1233433   24679999997 78999999999999999998 77666666542   4


Q ss_pred             eeEEEEEE
Q psy5751         219 YMYGIAAV  226 (232)
Q Consensus       219 ~p~gi~~~  226 (232)
                      .|..+++.
T Consensus       242 ~~t~~~f~  249 (297)
T 3g4e_A          242 KTTSCCFG  249 (297)
T ss_dssp             BEEEEEEE
T ss_pred             CceEEEEe
Confidence            57777765

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.87  E-value=2.6e-20  Score=150.19  Aligned_cols=201  Identities=12%  Similarity=0.087  Sum_probs=150.9

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEE--------eCCCCCccEEEEeecCCeEEEEeC-CCCeEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVI--------TTNIRSPEGLTFDWVNRVLYWTDS-QMDTIS   69 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~--------~~~~~~p~gl~~d~~~~~ly~~d~-~~~~I~   69 (232)
                      .|.++++++ ++.||++|..++ +|++++.+|..  ...+.        ...+..|.+|++|+.++.||++|. .+++|.
T Consensus        92 ~p~gia~d~-~g~l~v~d~~~~-~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~  169 (329)
T 3fvz_A           92 LPHGLSIDT-DGNYWVTDVALH-QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV  169 (329)
T ss_dssp             SEEEEEECT-TSCEEEEETTTT-EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred             CceEEEECC-CCCEEEEECCCC-EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence            378999997 556999999988 99999999863  32332        234568999999987789999996 789999


Q ss_pred             EEeCCCCCCEEEEe---------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CCCcEEEEEcCCCCCcceEE
Q psy5751          70 MANLNDDQPKVIVS---------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GTDREIFLKAADLKLPNSLA  139 (232)
Q Consensus        70 ~~~~~g~~~~~~~~---------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~~~~~~~~~~~~~~p~~l~  139 (232)
                      +++.+|.....+..         ..+..|.++++++.++.||+++..  .++|.+++.+ |.....+........|.+++
T Consensus       170 ~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~  247 (329)
T 3fvz_A          170 QFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--NGRIQCFKTDTKEFVREIKHASFGRNVFAIS  247 (329)
T ss_dssp             EECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred             EEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--CCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence            99998876655532         134569999999966999999986  6789999998 65444443222234566777


Q ss_pred             EeC------CCCEEEEEECCCCcEEEEecCCCce-EEEe---cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         140 VDF------RTDELCWVDADSKSLECMTIRNRVR-RKVY---SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       140 ~d~------~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~---~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      +.+      . +.+|+++....+|..+++..++. ..+.   ..+..|.+|+++ ++.||+++..+++|.+++.++..
T Consensus       248 ~~pg~~~~~~-g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~  324 (329)
T 3fvz_A          248 YIPGFLFAVN-GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM  324 (329)
T ss_dssp             EETTEEEEEE-CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred             ecCCEEEEeC-CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence            776      2 33444455566899999765544 3332   467889999997 67999999999999999988643

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.86  E-value=1.8e-19  Score=143.93  Aligned_cols=214  Identities=13%  Similarity=0.061  Sum_probs=156.0

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQP   78 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~   78 (232)
                      .|.++++++ ++.|||+|...+ +|++++.++... ..... ...|.+|+++.. ++||+++...  .+|++++......
T Consensus        33 ~pegia~~~-~g~lyv~d~~~~-~I~~~d~~g~~~-~~~~~-~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~~  107 (306)
T 2p4o_A           33 FLENLASAP-DGTIFVTNHEVG-EIVSITPDGNQQ-IHATV-EGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGTV  107 (306)
T ss_dssp             CEEEEEECT-TSCEEEEETTTT-EEEEECTTCCEE-EEEEC-SSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CcceEEECC-CCCEEEEeCCCC-eEEEECCCCceE-EEEeC-CCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCeE
Confidence            378999998 677999999888 999999998543 33332 358999999985 5599999664  3588887655444


Q ss_pred             EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE---------cCCCCCcceEEEeCCCCEEE
Q psy5751          79 KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK---------AADLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        79 ~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~---------~~~~~~p~~l~~d~~~~~Ly  148 (232)
                      ..+.. .....+.++++.+ .+.+|+++..  .++|++++.++...++...         ...+..|+||  ++++++||
T Consensus       108 ~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~--~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly  182 (306)
T 2p4o_A          108 ETLLTLPDAIFLNGITPLS-DTQYLTADSY--RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY  182 (306)
T ss_dssp             EEEEECTTCSCEEEEEESS-SSEEEEEETT--TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred             EEEEeCCCccccCcccccC-CCcEEEEECC--CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence            44444 3455688998865 7889999964  5689999987543222211         0125689998  66678999


Q ss_pred             EEECCCCcEEEEecCC-C---ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751         149 WVDADSKSLECMTIRN-R---VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGI  223 (232)
Q Consensus       149 ~~d~~~~~i~~~~~~g-~---~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi  223 (232)
                      ++|...++|+++++++ +   ..+.+. .+..|.|++++ +|+||++++.+++|.+++++|+.......+ .....|.++
T Consensus       183 v~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~-~~~~~p~~~  260 (306)
T 2p4o_A          183 VSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAE-QGVIGSTAV  260 (306)
T ss_dssp             EEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGG-GTCTTEEEE
T ss_pred             EEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeecc-cccCCceEE
Confidence            9999999999999985 2   233333 34689999997 789999999999999999987543321222 224678999


Q ss_pred             EEE
Q psy5751         224 AAV  226 (232)
Q Consensus       224 ~~~  226 (232)
                      ++.
T Consensus       261 a~~  263 (306)
T 2p4o_A          261 AFG  263 (306)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            886

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=3e-19  Score=149.87  Aligned_cols=201  Identities=17%  Similarity=0.160  Sum_probs=153.1

Q ss_pred             eEEEEE-------eCCCCEEEEEEcCCC-----CcEEEEEcCC--Ccee----EEEeCCCCCccEEEEeecCCeEEEEeC
Q psy5751           2 LIGITV-------DCVEGQVYYSSVADK-----SSIKRAHLDG--KNVE----DVITTNIRSPEGLTFDWVNRVLYWTDS   63 (232)
Q Consensus         2 ~~~i~~-------d~~~~~ly~~d~~~~-----~~i~~~~~~g--~~~~----~~~~~~~~~p~gl~~d~~~~~ly~~d~   63 (232)
                      |.+|+|       +...++||++|...+     ..|+.+....  ....    ..+. ...+|.++++|+.++.||+++.
T Consensus       188 p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~  266 (496)
T 3kya_A          188 IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSY  266 (496)
T ss_dssp             EEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEET
T ss_pred             CcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEEC
Confidence            788999       998888999998863     1477775443  2211    2333 4579999999998999999999


Q ss_pred             CCCeEEEEeCC-------CCCC------------EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751          64 QMDTISMANLN-------DDQP------------KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR  123 (232)
Q Consensus        64 ~~~~I~~~~~~-------g~~~------------~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~  123 (232)
                      .+++|++++++       +...            +.+.. .....|.+|+++|..+.||++|..  .++|+++++++...
T Consensus       267 ~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~--~h~I~kid~dg~~~  344 (496)
T 3kya_A          267 EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN--NHYFMRSDYDEIKK  344 (496)
T ss_dssp             TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTT
T ss_pred             CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC--CCEEEEEecCCCcc
Confidence            99999999987       3322            23333 344578999999977779999976  68899998887653


Q ss_pred             -----EEEEEc-------------CCCCCcc-eEEEeC------CCCEEEEEECCCCcEEEEecCCCceEEEec------
Q psy5751         124 -----EIFLKA-------------ADLKLPN-SLAVDF------RTDELCWVDADSKSLECMTIRNRVRRKVYS------  172 (232)
Q Consensus       124 -----~~~~~~-------------~~~~~p~-~l~~d~------~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~------  172 (232)
                           .++...             ..+..|. +++++.      ..+.||++|..+++|.+++.+|. ..+++.      
T Consensus       345 ~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~  423 (496)
T 3kya_A          345 EFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTS  423 (496)
T ss_dssp             EECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHH
T ss_pred             eecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCC-EEEEeccccccc
Confidence                 333332             1267899 888873      45899999999999999998873 444421      


Q ss_pred             ------------------CCCceEEEEEEC--CEEEEEeCCCCcEEEEeCCCCC
Q psy5751         173 ------------------NCTYPFGLSITD--EKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       173 ------------------~~~~p~gla~~~--~~ly~td~~~~~i~~~~~~g~~  206 (232)
                                        ++..|.||+++.  +.||++|..+++|+++++++..
T Consensus       424 ~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~  477 (496)
T 3kya_A          424 LADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE  477 (496)
T ss_dssp             HHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred             ccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence                              357799999983  8999999999999999988644

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.86  E-value=4e-20  Score=144.26  Aligned_cols=196  Identities=15%  Similarity=0.251  Sum_probs=153.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      |.++++++ ++.||+++. ++ +|++++.++.....+.......|.+|++|+ .++||+++...+.|++++.........
T Consensus        69 p~~i~~~~-~g~l~v~~~-~~-~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~  144 (270)
T 1rwi_B           69 PQGLAVDG-AGTVYVTDF-NN-RVVTLAAGSNNQTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVL  144 (270)
T ss_dssp             CCCEEECT-TCCEEEEET-TT-EEEEECTTCSCCEECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred             cceeEECC-CCCEEEEcC-CC-EEEEEeCCCceEeeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEee
Confidence            56889998 456999998 66 899999998765433334557899999998 567999998888999997554443333


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      ....+..|.++++++ ++.||+++..  .+.|.+++.++.......... +..|.+|++|++ +.||+++...++|.+++
T Consensus       145 ~~~~~~~p~~i~~~~-~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~  219 (270)
T 1rwi_B          145 PFTGLNDPDGVAVDN-SGNVYVTDTD--NNRVVKLEAESNNQVVLPFTD-ITAPWGIAVDEA-GTVYVTEHNTNQVVKLL  219 (270)
T ss_dssp             CCCSCCSCCCEEECT-TCCEEEEEGG--GTEEEEECTTTCCEEECCCSS-CCSEEEEEECTT-CCEEEEETTTSCEEEEC
T ss_pred             ccccCCCceeEEEeC-CCCEEEEECC--CCEEEEEecCCCceEeecccC-CCCceEEEECCC-CCEEEEECCCCcEEEEc
Confidence            334567899999998 6789999975  467999999887654433333 678999999997 59999999999999999


Q ss_pred             cCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         162 IRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       162 ~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      .++....... ..+..|.+++++ ++.||+++..+++|..++...+.
T Consensus       220 ~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          220 AGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             TTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred             CCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence            9987655443 356789999997 67899999999999999987443

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.85  E-value=2.5e-18  Score=135.56  Aligned_cols=218  Identities=17%  Similarity=0.225  Sum_probs=162.1

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .|.++.++. ++.||+++...+ .|.+++.++ ....+. ......|.+|++|. .+.||+++...+.|.+++.+|....
T Consensus        21 ~p~~i~~d~-~g~l~v~~~~~~-~v~~~~~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~g~~~~   96 (300)
T 2qc5_A           21 GPYGITSSE-DGKVWFTQHKAN-KISSLDQSG-RIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKKGGFTE   96 (300)
T ss_dssp             CEEEEEECT-TSCEEEEETTTT-EEEEECTTS-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEE
T ss_pred             CcceeeECC-CCCEEEEcCCCC-eEEEECCCC-ceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCCCCeEE
Confidence            377899998 678999998777 899999884 333332 23357899999997 5679999988889999999855432


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      .........|.++++++ ++.||+++..  .+.|.+++.++.......... ...|.++++|+. ++||+++...+.|.+
T Consensus        97 ~~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~-~~~~~~i~~d~~-g~l~v~~~~~~~i~~  171 (300)
T 2qc5_A           97 YPLPQPDSGPYGITEGL-NGDIWFTQLN--GDRIGKLTADGTIYEYDLPNK-GSYPAFITLGSD-NALWFTENQNNSIGR  171 (300)
T ss_dssp             EECSSTTCCEEEEEECS-TTCEEEEETT--TTEEEEECTTSCEEEEECSST-TCCEEEEEECTT-SSEEEEETTTTEEEE
T ss_pred             ecCCCCCCCCccceECC-CCCEEEEccC--CCeEEEECCCCCEEEccCCCC-CCCceeEEECCC-CCEEEEecCCCeEEE
Confidence            22223457899999997 7899999865  457999998844332222222 678999999997 669999998899999


Q ss_pred             EecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         160 MTIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       160 ~~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ++.++....... .....|.+++++ ++.||+++...+.|.++++.|.... +..+ .....|.+|++.+++
T Consensus       172 ~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~~~~~~~i~~d~~g  241 (300)
T 2qc5_A          172 ITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISE-YDIP-TPNARPHAITAGKNS  241 (300)
T ss_dssp             ECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEE-EECS-STTCCEEEEEECSTT
T ss_pred             ECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEE-EECC-CCCCCceEEEECCCC
Confidence            999765443222 356789999997 7899999998899999999554322 3222 235679999987664

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.85  E-value=1.7e-18  Score=136.57  Aligned_cols=217  Identities=13%  Similarity=0.200  Sum_probs=161.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |.+++++. ++.||+++...+ +|.+++.+|.. ...... ....|.++++|. .+.||+++...+.|++++.+|.....
T Consensus        64 ~~~i~~~~-~g~l~v~~~~~~-~v~~~d~~g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~  139 (300)
T 2qc5_A           64 VMCLIVSS-LGDIWFTENGAN-KIGKLSKKGGF-TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEY  139 (300)
T ss_dssp             EEEEEECT-TSCEEEEETTTT-EEEEECTTSCE-EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEE
T ss_pred             ceeEEECC-CCCEEEEecCCC-eEEEECCCCCe-EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEc
Confidence            67899996 678999998777 89999988543 333322 347899999997 67899999888899999998544333


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ........|.++++++ ++.||+++..  .+.|++++.++.... +........|.++++|++ +.||+++...+.|.++
T Consensus       140 ~~~~~~~~~~~i~~d~-~g~l~v~~~~--~~~i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~  214 (300)
T 2qc5_A          140 DLPNKGSYPAFITLGS-DNALWFTENQ--NNSIGRITNTGKLEE-YPLPTNAAAPVGITSGND-GALWFVEIMGNKIGRI  214 (300)
T ss_dssp             ECSSTTCCEEEEEECT-TSSEEEEETT--TTEEEEECTTCCEEE-EECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEE
T ss_pred             cCCCCCCCceeEEECC-CCCEEEEecC--CCeEEEECCCCcEEE-eeCCCCCCCcceEEECCC-CCEEEEccCCCEEEEE
Confidence            3334567899999998 6779999965  467999988655433 222222678999999986 7999999988999999


Q ss_pred             ecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +.+|....... .....|.+++++ ++.||+++..++.|.++++.|.. ..+..+ .....|.+|++.+++
T Consensus       215 ~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~-~~~~~~-~~~~~~~~i~~~~~g  283 (300)
T 2qc5_A          215 TTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTI-QEYQLQ-TENAEPHGITFGKDG  283 (300)
T ss_dssp             CTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCE-EEEECC-STTCCCCCEEECTTS
T ss_pred             cCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcE-EEEECC-ccCCccceeEeCCCC
Confidence            99665443323 356789999997 77899999988999999996532 333332 234578999887653

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.84  E-value=3.5e-18  Score=134.52  Aligned_cols=195  Identities=16%  Similarity=0.165  Sum_probs=151.6

Q ss_pred             eEEEEEeCCCCEEEEEEcC-CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVA-DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~-~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |.+++++..++.||+++.. +. .|.+++.+|.....+.......|.++++|+ .++||+++...+.|.+++.+|.....
T Consensus        79 p~~i~~~~~~g~l~v~~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~  156 (286)
T 1q7f_A           79 PNRVAVVRNSGDIIVTERSPTH-QIQIYNQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNVLHK  156 (286)
T ss_dssp             EEEEEEETTTTEEEEEECGGGC-EEEEECTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred             ceEEEEEcCCCeEEEEcCCCCC-EEEEECCCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCCEEEE
Confidence            6789997668999999965 56 899999877655444334457899999998 45799999988999999988865544


Q ss_pred             EEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC-cEE
Q psy5751          81 IVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK-SLE  158 (232)
Q Consensus        81 ~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~-~i~  158 (232)
                      +.. ..+..|.++++++ ++.||+++..  .++|.+.+.++.....+.....+..|.+|++|++ ++||+++...+ +|.
T Consensus       157 ~~~~~~~~~p~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~  232 (286)
T 1q7f_A          157 FGCSKHLEFPNGVVVND-KQEIFISDNR--AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLT  232 (286)
T ss_dssp             EECTTTCSSEEEEEECS-SSEEEEEEGG--GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEE
T ss_pred             eCCCCccCCcEEEEECC-CCCEEEEECC--CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCC-CCEEEEeCCCCEEEE
Confidence            433 4567899999998 7889999975  4679999988765444332222578999999997 79999999886 999


Q ss_pred             EEecCCCceEEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         159 CMTIRNRVRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       159 ~~~~~g~~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++.+|.....+..  ....|.+++++ ++.||+++. +++|..++..
T Consensus       233 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~  279 (286)
T 1q7f_A          233 IFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK-DYRLYIYRYV  279 (286)
T ss_dssp             EECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET-TTEEEEEECS
T ss_pred             EECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC-CCeEEEEEcc
Confidence            99998876666644  34458999997 789999975 6788877654

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.83  E-value=6.7e-18  Score=133.69  Aligned_cols=211  Identities=14%  Similarity=0.091  Sum_probs=157.6

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|.+++|++..+.|||++...+ +|++++.++. .+ .+......|.++++++ .+.||+++...+.|.+++........
T Consensus        29 ~~eg~~~d~~g~~l~~~~~~~~-~i~~~~~~~~-~~-~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~  104 (296)
T 3e5z_A           29 WTEGPVYVPARSAVIFSDVRQN-RTWAWSDDGQ-LS-PEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWES  104 (296)
T ss_dssp             SEEEEEEEGGGTEEEEEEGGGT-EEEEEETTSC-EE-EEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred             cccCCeEeCCCCEEEEEeCCCC-EEEEEECCCC-eE-EEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEE
Confidence            3789999998888999999888 9999999987 43 3344456899999998 56699999888899999984433333


Q ss_pred             EEe----CCCCCceEEEEeCCCCeEEEEEcC---------------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEe
Q psy5751          81 IVS----KDLVNPRGIVVHPYYRKLFWSDWN---------------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVD  141 (232)
Q Consensus        81 ~~~----~~~~~p~~iavd~~~~~ly~~d~~---------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d  141 (232)
                      +..    .....|+++++++ +|.||+++..               ...+.|++++.++. ...+. .. +..|++++++
T Consensus       105 ~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~-~~-~~~~~gi~~s  180 (296)
T 3e5z_A          105 IADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPI-RD-RVKPNGLAFL  180 (296)
T ss_dssp             EECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEE-CC-CSSEEEEEEC
T ss_pred             EeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEee-cC-CCCCccEEEC
Confidence            332    1245788999998 7899998741               11357999988843 33333 33 7889999999


Q ss_pred             CCCCEEEEEECCCCcEEEEecC--CCc---eEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccC
Q psy5751         142 FRTDELCWVDADSKSLECMTIR--NRV---RRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMM  215 (232)
Q Consensus       142 ~~~~~Ly~~d~~~~~i~~~~~~--g~~---~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~  215 (232)
                      ++++.| |++...++|++++++  |..   .+.+......|.+++++ +|+||++.  .+.|.+++++|.....+..+..
T Consensus       181 ~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~  257 (296)
T 3e5z_A          181 PSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT  257 (296)
T ss_dssp             TTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC
T ss_pred             CCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC
Confidence            997777 999999999999986  322   23342245678999997 78999999  6789999999877666654332


Q ss_pred             CcceeEEEEEE
Q psy5751         216 GTTYMYGIAAV  226 (232)
Q Consensus       216 ~~~~p~gi~~~  226 (232)
                          |..+++.
T Consensus       258 ----~~~~~f~  264 (296)
T 3e5z_A          258 ----TSNLCFG  264 (296)
T ss_dssp             ----CCEEEEE
T ss_pred             ----ceeEEEE
Confidence                6666664

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=99.83  E-value=2e-18  Score=137.40  Aligned_cols=198  Identities=10%  Similarity=0.184  Sum_probs=149.0

Q ss_pred             EeCCCCEEEEEEcCC------------CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEe---CCCCeEEEE
Q psy5751           7 VDCVEGQVYYSSVAD------------KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD---SQMDTISMA   71 (232)
Q Consensus         7 ~d~~~~~ly~~d~~~------------~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d---~~~~~I~~~   71 (232)
                      +...+++||+++...            ...|++++++|+..+.+... .    +.++...++.|||++   .....|+++
T Consensus        60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~  134 (302)
T 3s25_A           60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD-P----CIYASLIGNYIYYLHYDTQTATSLYRI  134 (302)
T ss_dssp             EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS-C----EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred             EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC-C----ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence            345689999998654            22799999999986454432 1    224444589999999   567899999


Q ss_pred             eCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751          72 NLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        72 ~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      +++|...+.+.....     +++++..+.|||++.+  ..+|++++++|...+.+...     +....++|.++.|||++
T Consensus       135 ~~dGs~~~~lt~~~~-----~~~~~~g~~iy~t~~g--~~~Iy~~~l~g~~~~~l~~~-----~~~~~~~P~g~~iy~t~  202 (302)
T 3s25_A          135 RIDGEEKKKIKNHYL-----FTCNTSDRYFYYNNPK--NGQLYRYDTASQSEALFYDC-----NCYKPVVLDDTNVYYMD  202 (302)
T ss_dssp             ETTSCCCEEEESSCC-----CCSEEETTEEEEECTT--TCCEEEEETTTTEEEEEECS-----CEEEEEEEETTEEEEEE
T ss_pred             ECCCCCeEEEeCCCc-----eEeeEECCEEEEEeCC--CceEEEEECCCCCEEEEeCC-----CccceeeecCCEEEEEE
Confidence            999999888887433     3456679999999873  57899999999988877543     33345778889999999


Q ss_pred             CCC-CcEEEEecCCCceEEEecCCCceEEEEEECCEEEEE-eCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         152 ADS-KSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWT-DWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       152 ~~~-~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~t-d~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ... .+|++++++|+.++++.+. ..|. ++..+++|||+ +.....|++++.+|...+.+...     ....|+++++
T Consensus       203 ~~~~~~I~~~~ldG~~~~~Lt~~-~~~~-~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~-----~~~~i~i~~d  274 (302)
T 3s25_A          203 VNRDNAIVHVNINNPNPVVLTEA-NIEH-YNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG-----EFCNINVTSQ  274 (302)
T ss_dssp             GGGTTEEEEECSSSCCCEECSCS-CEEE-EEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES-----CEEEEEECSS
T ss_pred             cCCCcEEEEEECCCCCeEEEeCC-Ccce-EEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC-----ccceEEEeCC
Confidence            764 5899999999988777542 2243 77889999998 56678999999999988877542     2346776654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.83  E-value=1.3e-17  Score=131.45  Aligned_cols=214  Identities=14%  Similarity=0.216  Sum_probs=158.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |.++++++ ++.+|+++...+ .|++++.++.. ..+.. .....|.++++|+ .+.||+++...+.|.+++.+|.....
T Consensus        59 ~~~i~~~~-~g~l~v~~~~~~-~i~~~~~~g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~  134 (299)
T 2z2n_A           59 VMCLTISS-DGEVWFTENAAN-KIGRITKKGII-KEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREY  134 (299)
T ss_dssp             EEEEEECT-TSCEEEEETTTT-EEEEECTTSCE-EEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEE
T ss_pred             eeeEEECC-CCCEEEeCCCCC-eEEEECCCCcE-EEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEe
Confidence            67899997 678999988777 89999988543 23322 2456899999997 57899999888899999996654433


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ........|.++++++ ++.||+++..  .+.|++++.++.......... ...|.++++|+. +.||+++...+.|.++
T Consensus       135 ~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~-g~l~v~~~~~~~i~~~  209 (299)
T 2z2n_A          135 ELPNKGSYPSFITLGS-DNALWFTENQ--NNAIGRITESGDITEFKIPTP-ASGPVGITKGND-DALWFVEIIGNKIGRI  209 (299)
T ss_dssp             ECSSTTCCEEEEEECT-TSCEEEEETT--TTEEEEECTTCCEEEEECSST-TCCEEEEEECTT-SSEEEEETTTTEEEEE
T ss_pred             cCCCCCCCCceEEEcC-CCCEEEEeCC--CCEEEEEcCCCcEEEeeCCCC-CCcceeEEECCC-CCEEEEccCCceEEEE
Confidence            3334567899999997 7899999864  467999988544332212222 678999999997 7799999888999999


Q ss_pred             ecCCCceEEE-ec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         161 TIRNRVRRKV-YS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       161 ~~~g~~~~~~-~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +.++. ...+ .. ....|.+++++ ++.||+++..++.|.+++++|. ...+..+ .+...|.++++ ++
T Consensus       210 ~~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~-~~~~~~~~i~~-~~  276 (299)
T 2z2n_A          210 TTSGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNI-IEEYPIQ-IKSAEPHGICF-DG  276 (299)
T ss_dssp             CTTCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTE-EEEEECS-SSSCCEEEEEE-CS
T ss_pred             CCCCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCc-eEEEeCC-CCCCccceEEe-cC
Confidence            99554 3333 22 45789999997 6799999988899999999653 3333332 23457899988 44

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.83  E-value=1.1e-17  Score=131.78  Aligned_cols=217  Identities=18%  Similarity=0.257  Sum_probs=159.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |.++++++ ++.||+++...+ .|.+++.++ ...... ......|.+|++|+ .+.||+++...+.|.+++.++.....
T Consensus        17 ~~~i~~d~-~g~l~v~~~~~~-~v~~~d~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~   92 (299)
T 2z2n_A           17 PYGITVSD-KGKVWITQHKAN-MISCINLDG-KITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKKGIIKEY   92 (299)
T ss_dssp             EEEEEECT-TSCEEEEETTTT-EEEEECTTC-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred             ccceEECC-CCCEEEEecCCC-cEEEEcCCC-CeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCCCcEEEE
Confidence            67899997 678999998777 899999884 333333 22457899999997 56799999888899999988653222


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ........|.++++++ ++.||+++..  .+.|.+.+.++.......... ...|+++++|++ ++||+++...+.|.++
T Consensus        93 ~~~~~~~~~~~i~~~~-~g~l~v~~~~--~~~i~~~d~~g~~~~~~~~~~-~~~~~~i~~~~~-g~l~v~~~~~~~i~~~  167 (299)
T 2z2n_A           93 TLPNPDSAPYGITEGP-NGDIWFTEMN--GNRIGRITDDGKIREYELPNK-GSYPSFITLGSD-NALWFTENQNNAIGRI  167 (299)
T ss_dssp             ECSSTTCCEEEEEECT-TSCEEEEETT--TTEEEEECTTCCEEEEECSST-TCCEEEEEECTT-SCEEEEETTTTEEEEE
T ss_pred             eCCCcCCCceeeEECC-CCCEEEEecC--CceEEEECCCCCEEEecCCCC-CCCCceEEEcCC-CCEEEEeCCCCEEEEE
Confidence            2223566899999997 7899999865  457999988554333222222 568999999986 7999999888999999


Q ss_pred             ecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +.++....... .....|.+++++ ++.||+++...+.|.++++.+. ...+..+ .....|.+|++.+++
T Consensus       168 ~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~-~~~~~~~~i~~~~~g  236 (299)
T 2z2n_A          168 TESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGE-ITEFKIP-TPNARPHAITAGAGI  236 (299)
T ss_dssp             CTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC-EEEEECS-STTCCEEEEEECSTT
T ss_pred             cCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCc-EEEEECC-CCCCCceeEEECCCC
Confidence            99554333222 356779999997 6789999998899999999443 3333322 235679999987654

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.82  E-value=2.2e-18  Score=137.40  Aligned_cols=210  Identities=15%  Similarity=0.152  Sum_probs=157.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +.+..|++..+.|||+|..++ +|++++.+|. .+.+ ......|.++++|+ .++||+++...+.|.+++.+|.. ..+
T Consensus        47 ~egp~~~~~g~~l~~~d~~~~-~i~~~~~~g~-~~~~-~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~g~~-~~~  121 (305)
T 3dr2_A           47 SEGPAWWEAQRTLVWSDLVGR-RVLGWREDGT-VDVL-LDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDADGQA-HLL  121 (305)
T ss_dssp             EEEEEEEGGGTEEEEEETTTT-EEEEEETTSC-EEEE-EESCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE-EEE
T ss_pred             ccCCeEeCCCCEEEEEECCCC-EEEEEeCCCC-EEEE-eCCCCccceeeECC-CCCEEEEECCCCEEEEECCCCCE-EEE
Confidence            678999998889999999988 9999998765 3233 33346899999998 45699999888899999998653 333


Q ss_pred             Ee----CCCCCceEEEEeCCCCeEEEEEcC---------------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751          82 VS----KDLVNPRGIVVHPYYRKLFWSDWN---------------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        82 ~~----~~~~~p~~iavd~~~~~ly~~d~~---------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~  142 (232)
                      ..    ..+..|+++++++ +|.||++|..               .....|++++.++...+.+. .  +..|+++++++
T Consensus       122 ~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~~p~gl~~sp  197 (305)
T 3dr2_A          122 VGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LDHPNGLAFSP  197 (305)
T ss_dssp             ECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ESSEEEEEECT
T ss_pred             EeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--CCCCcceEEcC
Confidence            32    1346789999998 7899998631               11357999998655555554 3  77899999999


Q ss_pred             CCCEEEEEECCC-----CcEEEEecCCCc---eEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEe
Q psy5751         143 RTDELCWVDADS-----KSLECMTIRNRV---RRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIAL  212 (232)
Q Consensus       143 ~~~~Ly~~d~~~-----~~i~~~~~~g~~---~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~  212 (232)
                      +++.||+++...     ++|+++++++..   .+.+.. ....|.|++++ +++||++..  +.|.+++++|.....+..
T Consensus       198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~--~gv~~~~~~g~~~~~~~~  275 (305)
T 3dr2_A          198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG--TGVCVFDSDGQLLGHIPT  275 (305)
T ss_dssp             TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS--SEEEEECTTSCEEEEEEC
T ss_pred             CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC--CcEEEECCCCCEEEEEEC
Confidence            988999999874     789999987642   233332 35678999997 788888873  459999999887776654


Q ss_pred             ccCCcceeEEEEEE
Q psy5751         213 DMMGTTYMYGIAAV  226 (232)
Q Consensus       213 ~~~~~~~p~gi~~~  226 (232)
                      +.    .|..+++.
T Consensus       276 ~~----~~~~~~f~  285 (305)
T 3dr2_A          276 PG----TASNCTFD  285 (305)
T ss_dssp             SS----CCCEEEEC
T ss_pred             CC----ceeEEEEe
Confidence            33    46666654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.82  E-value=5.4e-18  Score=136.10  Aligned_cols=196  Identities=11%  Similarity=0.107  Sum_probs=147.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe----CCCCCccEEEEeecCCeEEEEeCC-------------
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT----TNIRSPEGLTFDWVNRVLYWTDSQ-------------   64 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~----~~~~~p~gl~~d~~~~~ly~~d~~-------------   64 (232)
                      |.++++++.++.||++|.. . .|++++.++...+.+..    ..+..|.++++|+..++||++|..             
T Consensus        82 p~gi~~~~~~g~l~v~d~~-~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~  159 (322)
T 2fp8_A           82 TYDISYNLQNNQLYIVDCY-Y-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD  159 (322)
T ss_dssp             EEEEEEETTTTEEEEEETT-T-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred             CceEEEcCCCCcEEEEECC-C-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence            7899999768999999976 3 58888888654433332    124579999999844689999965             


Q ss_pred             ----CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC---CcEEEEEcCCCCCcce
Q psy5751          65 ----MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT---DREIFLKAADLKLPNS  137 (232)
Q Consensus        65 ----~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~---~~~~~~~~~~~~~p~~  137 (232)
                          .++|++++.++.....+.. .+..|++|++++.++.||+++..  .++|+++++++.   ..+.+...  .. |.+
T Consensus       160 ~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~--~~~I~~~~~~~~~~~~~~~~~~~--~g-P~g  233 (322)
T 2fp8_A          160 TSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFL--SHQIVKYWLEGPKKGTAEVLVKI--PN-PGN  233 (322)
T ss_dssp             HTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGG--GTEEEEEESSSTTTTCEEEEEEC--SS-EEE
T ss_pred             ccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCC--CCeEEEEECCCCcCCccceEEeC--CC-CCC
Confidence                2679999987655444443 56789999999966789999975  568999999863   33444432  23 999


Q ss_pred             EEEeCCCCEEEEEECC----------CCcEEEEecCCCceEEEecC----CCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         138 LAVDFRTDELCWVDAD----------SKSLECMTIRNRVRRKVYSN----CTYPFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       138 l~~d~~~~~Ly~~d~~----------~~~i~~~~~~g~~~~~~~~~----~~~p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      |++|++ +.||+++..          .++|.+++.+|...+.+...    +..|.+++..++.||+++..+++|.++++.
T Consensus       234 i~~d~~-G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~  312 (322)
T 2fp8_A          234 IKRNAD-GHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD  312 (322)
T ss_dssp             EEECTT-SCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred             eEECCC-CCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence            999997 689999876          56899999998766666432    567888888899999999999999999987


Q ss_pred             CCC
Q psy5751         204 GER  206 (232)
Q Consensus       204 g~~  206 (232)
                      ...
T Consensus       313 ~~~  315 (322)
T 2fp8_A          313 KKG  315 (322)
T ss_dssp             ---
T ss_pred             ccc
Confidence            443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.81  E-value=3e-17  Score=132.27  Aligned_cols=215  Identities=13%  Similarity=0.107  Sum_probs=159.5

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-----CCccEEEEeecCCeEEEEeCC-CCeEEEEeCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-----RSPEGLTFDWVNRVLYWTDSQ-MDTISMANLN   74 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-----~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~   74 (232)
                      .|.++++++ +++||+++...+ .|.++++........+..+.     ..|.+|+++  ++.||+++.. .+.|.++|+.
T Consensus        85 ~p~~i~~~~-~g~lyv~~~~~~-~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~  160 (328)
T 3dsm_A           85 SPRYIHFLS-DEKAYVTQIWDY-RIFIINPKTYEITGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTE  160 (328)
T ss_dssp             SEEEEEEEE-TTEEEEEEBSCS-EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETT
T ss_pred             CCcEEEEeC-CCeEEEEECCCC-eEEEEECCCCeEEEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECC
Confidence            378899976 459999996667 89999998766544443321     279999994  7899999984 7899999988


Q ss_pred             CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC--------CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751          75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS--------GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~--------~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~  146 (232)
                      .......+. ....|.++++++ +|.+|++..+..        .+.|++++.........+.......|++|++++++++
T Consensus       161 t~~~~~~i~-~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~  238 (328)
T 3dsm_A          161 TDKVVDELT-IGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT  238 (328)
T ss_dssp             TTEEEEEEE-CSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred             CCeEEEEEE-cCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence            655443444 345799999998 788999886520        2679999987554332222211347999999999999


Q ss_pred             EEEEECCCCcEEEEecCCCceE--EEec-CCCceEEEEEE--CCEEEEEe----CCCCcEEEEeCCCCCcceEEeccCCc
Q psy5751         147 LCWVDADSKSLECMTIRNRVRR--KVYS-NCTYPFGLSIT--DEKYYWTD----WKTNRIESANKEGERAPSIALDMMGT  217 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~g~~~~--~~~~-~~~~p~gla~~--~~~ly~td----~~~~~i~~~~~~g~~~~~i~~~~~~~  217 (232)
                      ||+++.   .|+++++++.+..  .+.. ....|.|++++  +++||+++    +.+++|.+++++|+..+.+..    -
T Consensus       239 lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~----G  311 (328)
T 3dsm_A          239 LYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYV----G  311 (328)
T ss_dssp             EEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEE----E
T ss_pred             EEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEe----c
Confidence            999976   8999999865532  1122 25789999995  78999999    788999999999887777754    3


Q ss_pred             ceeEEEEEEcC
Q psy5751         218 TYMYGIAAVPS  228 (232)
Q Consensus       218 ~~p~gi~~~~~  228 (232)
                      ..|.+++.-+.
T Consensus       312 ~~P~~~~~~~~  322 (328)
T 3dsm_A          312 IIPGAFCWKLE  322 (328)
T ss_dssp             ESEEEEEEECC
T ss_pred             cCcceEEEecc
Confidence            36888887653

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=99.81  E-value=2e-17  Score=134.60  Aligned_cols=220  Identities=14%  Similarity=0.142  Sum_probs=154.7

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-----eCCCCCccEEEEeec---CCeEEEEeCCC-----Ce
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-----TTNIRSPEGLTFDWV---NRVLYWTDSQM-----DT   67 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-----~~~~~~p~gl~~d~~---~~~ly~~d~~~-----~~   67 (232)
                      .|.++++++ +++||+++.. + +|++++ +|.. +.+.     ......|.||++++.   ++.||+++...     ++
T Consensus        32 ~P~~ia~~p-dG~l~V~e~~-g-~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~  106 (352)
T 2ism_A           32 VPWALAFLP-DGGMLIAERP-G-RIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ  106 (352)
T ss_dssp             CEEEEEECT-TSCEEEEETT-T-EEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred             CceEEEEcC-CCeEEEEeCC-C-eEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence            488999998 5679999976 5 899998 6542 2222     224578999999986   68999998754     68


Q ss_pred             EEEEeCCCCC---CEEEEe------CCCCCceEEEEeCCCCeEEEEEcCC-----------CCCcEEEEeCCC-------
Q psy5751          68 ISMANLNDDQ---PKVIVS------KDLVNPRGIVVHPYYRKLFWSDWNR-----------SGPKIEWSNLDG-------  120 (232)
Q Consensus        68 I~~~~~~g~~---~~~~~~------~~~~~p~~iavd~~~~~ly~~d~~~-----------~~~~I~~~~~~g-------  120 (232)
                      |.+++.++..   .+.++.      .....|.+|+++| +|.||++....           ..++|.|++.+|       
T Consensus       107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np  185 (352)
T 2ism_A          107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP  185 (352)
T ss_dssp             EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred             EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence            9999988642   233433      1245789999998 78999997432           136899999998       


Q ss_pred             ------CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc--------EEEEecCCC----------------ceEEE
Q psy5751         121 ------TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS--------LECMTIRNR----------------VRRKV  170 (232)
Q Consensus       121 ------~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~--------i~~~~~~g~----------------~~~~~  170 (232)
                            ...+++...  +.+|.|+++|+.++.||++|...+.        |.++...+.                .....
T Consensus       186 f~~~~~~~~~i~a~G--~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~  263 (352)
T 2ism_A          186 FLGRRGARPEVYSLG--HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF  263 (352)
T ss_dssp             TTTCTTSCTTEEEEC--CSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred             ccCCCCCCccEEEEc--CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence                  334455444  7889999999977999999987665        555543220                01111


Q ss_pred             ecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCc-----ceEEeccCCcceeEEEEEEcCC
Q psy5751         171 YSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERA-----PSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       171 ~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~-----~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ......|.|+++.++.+|++++..++|.++..++...     ....+ ......|.+|++.+++
T Consensus       264 ~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~-~~~~~rp~~v~~~pdG  326 (352)
T 2ism_A          264 WPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETA-LSGFGRLREVQVGPDG  326 (352)
T ss_dssp             CTTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEE-EESSCCEEEEEECTTS
T ss_pred             cCCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchhee-cccCCCeeEEEECCCC
Confidence            1234568999999999999999999999999874321     11111 1234679999998765

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.81  E-value=9e-17  Score=129.03  Aligned_cols=221  Identities=15%  Similarity=0.186  Sum_probs=163.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC----CeEEEEeCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM----DTISMANLNDDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~g~~   77 (232)
                      |.+++|++ ++.|||++...+ .|++++.++.....+.......|.++++++ .+.||++....    +.|++++.++..
T Consensus        47 ~~~~~~~~-~g~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~  123 (333)
T 2dg1_A           47 LEGLNFDR-QGQLFLLDVFEG-NIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDN  123 (333)
T ss_dssp             EEEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred             ccCcEECC-CCCEEEEECCCC-EEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence            57889997 667999998888 999999987665555433446899999998 45788888765    689999999887


Q ss_pred             CEEEEe--CCCCCceEEEEeCCCCeEEEEEcCC----CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751          78 PKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNR----SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        78 ~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~----~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      ...+..  .....|.++++++ +|.+|+++...    ....|++++.++.....+...  ...|++++++++++.||+++
T Consensus       124 ~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~  200 (333)
T 2dg1_A          124 LQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTE  200 (333)
T ss_dssp             CEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEE
T ss_pred             EEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEe
Confidence            764443  2345789999998 78899988631    135799998887665555443  56799999999977899999


Q ss_pred             CCCCcEEEEecC--CCceEE-----Eec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccC---Ccc
Q psy5751         152 ADSKSLECMTIR--NRVRRK-----VYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMM---GTT  218 (232)
Q Consensus       152 ~~~~~i~~~~~~--g~~~~~-----~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~---~~~  218 (232)
                      ...+.|++++++  |.....     ...  ....|.+++++ ++++|+++..++.|.+++++|.....+..+..   ...
T Consensus       201 ~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~  280 (333)
T 2dg1_A          201 TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHML  280 (333)
T ss_dssp             GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSC
T ss_pred             CCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCcccccc
Confidence            888899999984  433221     111  22479999997 78899999888899999998766555543321   012


Q ss_pred             eeEEEEEEcC
Q psy5751         219 YMYGIAAVPS  228 (232)
Q Consensus       219 ~p~gi~~~~~  228 (232)
                      .|.++++.++
T Consensus       281 ~~~~~~~~~d  290 (333)
T 2dg1_A          281 RSTHPQFIPG  290 (333)
T ss_dssp             BCCEEEECTT
T ss_pred             CcceEEECCC
Confidence            5778877544

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=99.78  E-value=3.5e-16  Score=127.32  Aligned_cols=220  Identities=11%  Similarity=0.034  Sum_probs=156.3

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE-----eCCCCCccEEEEeec---CCeEEEEeCC---C----
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI-----TTNIRSPEGLTFDWV---NRVLYWTDSQ---M----   65 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~-----~~~~~~p~gl~~d~~---~~~ly~~d~~---~----   65 (232)
                      .|.++++++ +++||+++.. + +|++++.+|.  +.+.     ......|.||++++.   ++.||+++..   .    
T Consensus        30 ~P~~ia~~p-dG~l~V~e~~-g-~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~  104 (354)
T 3a9g_A           30 VPWSIAPLG-GGRYLVTERP-G-RLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR  104 (354)
T ss_dssp             CEEEEEEEE-TTEEEEEETT-T-EEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred             CCeEEEEcC-CCeEEEEeCC-C-EEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence            488999998 7789999987 5 8999976664  3332     224568999999986   7899999863   3    


Q ss_pred             CeEEEEeCCCCC-----CEEEEe----CCCCCceEEEEeCCCCeEEEEEcCC-----------CCCcEEEEeCCCC----
Q psy5751          66 DTISMANLNDDQ-----PKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR-----------SGPKIEWSNLDGT----  121 (232)
Q Consensus        66 ~~I~~~~~~g~~-----~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~-----------~~~~I~~~~~~g~----  121 (232)
                      ++|.+++.++..     .++++.    .....+.+|+++| +|.||++....           ..++|.|++.+|.    
T Consensus       105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~  183 (354)
T 3a9g_A          105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD  183 (354)
T ss_dssp             EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred             eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence            689999988751     333332    2345689999998 78999996431           1368999999987    


Q ss_pred             ----CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc---EEEEecCCCc-----------------eEEEe-cCCCc
Q psy5751         122 ----DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS---LECMTIRNRV-----------------RRKVY-SNCTY  176 (232)
Q Consensus       122 ----~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~---i~~~~~~g~~-----------------~~~~~-~~~~~  176 (232)
                          ..++....  +.+|.||++|+.++.||++|...+.   |..+.. |.+                 ..... .....
T Consensus       184 npf~~~~i~a~G--~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a  260 (354)
T 3a9g_A          184 NPFPNSPIWSYG--HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWA  260 (354)
T ss_dssp             SSSTTCCEEEEC--CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred             CCCCCCcEEEEc--cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence                44555554  8899999999977999999988654   555543 221                 11111 23456


Q ss_pred             eEEEEE--------ECCEEEEEeCCCCcEEEEeCCCC-Ccc-eEEeccCCcceeEEEEEEcCC
Q psy5751         177 PFGLSI--------TDEKYYWTDWKTNRIESANKEGE-RAP-SIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       177 p~gla~--------~~~~ly~td~~~~~i~~~~~~g~-~~~-~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      |.|+++        .++.||++++..++|.++..++. ... .-.+.......|.+|++.+++
T Consensus       261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG  323 (354)
T 3a9g_A          261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG  323 (354)
T ss_dssp             EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS
T ss_pred             CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC
Confidence            899999        57899999999999999998842 221 111211124579999988765

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.77  E-value=1e-15  Score=123.09  Aligned_cols=211  Identities=11%  Similarity=0.092  Sum_probs=154.9

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +++..|++.++.|||+|...+ .|++++.++.....+..  ...+.++++++ .+.+|++..  ..|++++.++.....+
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~-~i~~~d~~~~~~~~~~~--~~~v~~i~~~~-dg~l~v~~~--~gl~~~d~~~g~~~~~  124 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILER-ELHELHLASGRKTVHAL--PFMGSALAKIS-DSKQLIASD--DGLFLRDTATGVLTLH  124 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGT-EEEEEETTTTEEEEEEC--SSCEEEEEEEE-TTEEEEEET--TEEEEEETTTCCEEEE
T ss_pred             CcCCeEeCCCCEEEEEECCCC-EEEEEECCCCcEEEEEC--CCcceEEEEeC-CCeEEEEEC--CCEEEEECCCCcEEEE
Confidence            578999998899999999888 99999998766533322  25789999998 466777763  4699999876665545


Q ss_pred             EeC----CCCCceEEEEeCCCCeEEEEEcCC----CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          82 VSK----DLVNPRGIVVHPYYRKLFWSDWNR----SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        82 ~~~----~~~~p~~iavd~~~~~ly~~d~~~----~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ...    ....++++++|+ +|.+|+++...    ..+.|++++ ++. ...+...  ...|++++++++++.||+++..
T Consensus       125 ~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~-~~~~~~~--~~~~~~i~~s~dg~~lyv~~~~  199 (326)
T 2ghs_A          125 AELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGK-VTKLFAD--ISIPNSICFSPDGTTGYFVDTK  199 (326)
T ss_dssp             ECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTE-EEEEEEE--ESSEEEEEECTTSCEEEEEETT
T ss_pred             eeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCc-EEEeeCC--CcccCCeEEcCCCCEEEEEECC
Confidence            431    124678999998 67888887531    235789888 543 3333332  5679999999998899999998


Q ss_pred             CCcEEEEecC--CC-c---eEEEec---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEE
Q psy5751         154 SKSLECMTIR--NR-V---RRKVYS---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGI  223 (232)
Q Consensus       154 ~~~i~~~~~~--g~-~---~~~~~~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi  223 (232)
                      .+.|++++++  ++ .   ++.+..   ....|.+++++ ++.||++.+..+.|.+++++|+..+.+..+.   ..|.++
T Consensus       200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~---~~~~~~  276 (326)
T 2ghs_A          200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPG---KQTTCP  276 (326)
T ss_dssp             TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSC---SBEEEE
T ss_pred             CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCC---CCcEEE
Confidence            8999999986  32 2   233322   34679999997 7899999988889999999877666565432   357777


Q ss_pred             EEE
Q psy5751         224 AAV  226 (232)
Q Consensus       224 ~~~  226 (232)
                      ++.
T Consensus       277 af~  279 (326)
T 2ghs_A          277 AFI  279 (326)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            775

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.77  E-value=8.2e-17  Score=130.42  Aligned_cols=223  Identities=13%  Similarity=0.077  Sum_probs=151.7

Q ss_pred             CeEEEEEeCCCCEEEEEEcC--CC-CcEEEEEcCCCceeEE------EeCCCCCccEEEEeecCCeEEEEeCC-----CC
Q psy5751           1 MLIGITVDCVEGQVYYSSVA--DK-SSIKRAHLDGKNVEDV------ITTNIRSPEGLTFDWVNRVLYWTDSQ-----MD   66 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~--~~-~~i~~~~~~g~~~~~~------~~~~~~~p~gl~~d~~~~~ly~~d~~-----~~   66 (232)
                      .|.++++++ ++++|++...  .+ .+|..++ +|. ....      ....+..|.++++|+. ++|||+|..     ..
T Consensus        18 ~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~   93 (343)
T 2qe8_A           18 APGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDG-LIPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSVP   93 (343)
T ss_dssp             CEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTE-EEESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSCC
T ss_pred             CcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCC-eecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCCC
Confidence            478999997 6789998532  11 2688887 542 1100      1124679999999984 789999976     47


Q ss_pred             eEEEEeCCCCC-CEEEEe-C----CCCCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCCcEEEEEc--C-------
Q psy5751          67 TISMANLNDDQ-PKVIVS-K----DLVNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTDREIFLKA--A-------  130 (232)
Q Consensus        67 ~I~~~~~~g~~-~~~~~~-~----~~~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~~~~~~~~--~-------  130 (232)
                      +|.+++++... .+.+.- .    ....|+++++++.++.+|+++... ..+.|.+++++......++..  .       
T Consensus        94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~  173 (343)
T 2qe8_A           94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID  173 (343)
T ss_dssp             EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred             eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence            89999987544 333221 1    124679999998789999999721 145688888764433222211  0       


Q ss_pred             ------C-------------CCCcceEEEeCCCCEEEEEECCCCcEEEEecC----CC--ceE-----EEecCCCceEEE
Q psy5751         131 ------D-------------LKLPNSLAVDFRTDELCWVDADSKSLECMTIR----NR--VRR-----KVYSNCTYPFGL  180 (232)
Q Consensus       131 ------~-------------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~----g~--~~~-----~~~~~~~~p~gl  180 (232)
                            .             ...|+||+++++++.||+++....++++++.+    +.  ..+     ........|.|+
T Consensus       174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi  253 (343)
T 2qe8_A          174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI  253 (343)
T ss_dssp             CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred             eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence                  0             13589999999988999999988899999864    11  110     111234579999


Q ss_pred             EEE-CCEEEEEeCCCCcEEEEeC-CCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         181 SIT-DEKYYWTDWKTNRIESANK-EGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       181 a~~-~~~ly~td~~~~~i~~~~~-~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +++ +++||++++..++|.++++ +|.....+..  .....|.+|++.+++
T Consensus       254 a~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~--~~~~~p~~va~~~~g  302 (343)
T 2qe8_A          254 SIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD--EKLSWTDSFNFGSDG  302 (343)
T ss_dssp             EECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC--GGGSCEEEEEECTTS
T ss_pred             EECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC--CceecCCeeEECCCC
Confidence            997 7899999999999999999 6653332222  235689999997653

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.76  E-value=2.9e-15  Score=120.63  Aligned_cols=212  Identities=16%  Similarity=0.150  Sum_probs=154.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      |.++.++  +++||+++...+ .|.+++.........+. ....|.+|++++. +.||+++...+.|.++|+........
T Consensus        46 ~~~i~~~--~~~lyv~~~~~~-~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~  120 (328)
T 3dsm_A           46 AQSMVIR--DGIGWIVVNNSH-VIFAIDINTFKEVGRIT-GFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGY  120 (328)
T ss_dssp             EEEEEEE--TTEEEEEEGGGT-EEEEEETTTCCEEEEEE-CCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred             ceEEEEE--CCEEEEEEcCCC-EEEEEECcccEEEEEcC-CCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEE
Confidence            5677775  589999998878 99999998655433333 4579999999774 58999996678999999887654433


Q ss_pred             EeC-C----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--
Q psy5751          82 VSK-D----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--  154 (232)
Q Consensus        82 ~~~-~----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--  154 (232)
                      +.. .    ...|.+|+++  +++||+++++. ...|.++++........+..  ...|++++++++ +++|++....  
T Consensus       121 i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~-~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~d-G~l~v~~~~~~~  194 (328)
T 3dsm_A          121 IECPDMDMESGSTEQMVQY--GKYVYVNCWSY-QNRILKIDTETDKVVDELTI--GIQPTSLVMDKY-NKMWTITDGGYE  194 (328)
T ss_dssp             EECTTCCTTTCBCCCEEEE--TTEEEEEECTT-CCEEEEEETTTTEEEEEEEC--SSCBCCCEECTT-SEEEEEBCCBCT
T ss_pred             EEcCCccccCCCcceEEEE--CCEEEEEcCCC-CCEEEEEECCCCeEEEEEEc--CCCccceEEcCC-CCEEEEECCCcc
Confidence            431 1    1279999995  89999999742 45799999876544333333  457999999997 7899998765  


Q ss_pred             --------CcEEEEecCCCceE-EE-ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEE
Q psy5751         155 --------KSLECMTIRNRVRR-KV-YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYG  222 (232)
Q Consensus       155 --------~~i~~~~~~g~~~~-~~-~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~g  222 (232)
                              +.|.+++.++.+.. .+ ......|.++++.  +++||+++.   .|++++..+...........+...|+|
T Consensus       195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~g  271 (328)
T 3dsm_A          195 GSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYG  271 (328)
T ss_dssp             TCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEE
T ss_pred             CCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEE
Confidence                    78999999866543 23 2224589999996  789999986   899999875443211111112468999


Q ss_pred             EEEEc
Q psy5751         223 IAAVP  227 (232)
Q Consensus       223 i~~~~  227 (232)
                      |++.+
T Consensus       272 i~vdp  276 (328)
T 3dsm_A          272 LTVNP  276 (328)
T ss_dssp             EEECT
T ss_pred             EEEcC
Confidence            99976

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.75  E-value=7.8e-16  Score=122.27  Aligned_cols=216  Identities=16%  Similarity=0.148  Sum_probs=154.7

Q ss_pred             eEEEEEeCCCCEEEEE-------EcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEE
Q psy5751           2 LIGITVDCVEGQVYYS-------SVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISM   70 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~-------d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~   70 (232)
                      |.+++|+. ++.||++       +...+ .|++++.+......+...    ....|.++++|+.++.||+++... .|.+
T Consensus        20 ~~~~~~~~-~g~l~~~~~~~~~~~~~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~-~l~~   96 (314)
T 1pjx_A           20 AEGPVFDK-NGDFYIVAPEVEVNGKPAG-EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL-GLLV   96 (314)
T ss_dssp             CEEEEECT-TSCEEEEETTCEETTEECC-EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT-EEEE
T ss_pred             ccCceECC-CCCEEEEEeccccCCCCCC-EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC-CEEE
Confidence            67999995 7789999       76667 899999765554333321    225789999998548899998754 7999


Q ss_pred             EeCCCCCCEEE-Ee----CCCCCceEEEEeCCCCeEEEEEcCCC-------------CCcEEEEeCCCCCcEEEEEcCCC
Q psy5751          71 ANLNDDQPKVI-VS----KDLVNPRGIVVHPYYRKLFWSDWNRS-------------GPKIEWSNLDGTDREIFLKAADL  132 (232)
Q Consensus        71 ~~~~g~~~~~~-~~----~~~~~p~~iavd~~~~~ly~~d~~~~-------------~~~I~~~~~~g~~~~~~~~~~~~  132 (232)
                      ++.+|. ...+ ..    .....|.++++++ +|.||+++....             .+.|++++.++. ...+...  .
T Consensus        97 ~d~~g~-~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~--~  171 (314)
T 1pjx_A           97 VQTDGT-FEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQVDTA--F  171 (314)
T ss_dssp             EETTSC-EEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEEEEE--E
T ss_pred             EeCCCC-EEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCC-EEEeccC--C
Confidence            998843 3333 22    1234689999998 789999986421             257899988743 3333333  5


Q ss_pred             CCcceEEEe----CCCCEEEEEECCCCcEEEEecCC-Cc---eEEEec---CC-CceEEEEEE-CCEEEEEeCCCCcEEE
Q psy5751         133 KLPNSLAVD----FRTDELCWVDADSKSLECMTIRN-RV---RRKVYS---NC-TYPFGLSIT-DEKYYWTDWKTNRIES  199 (232)
Q Consensus       133 ~~p~~l~~d----~~~~~Ly~~d~~~~~i~~~~~~g-~~---~~~~~~---~~-~~p~gla~~-~~~ly~td~~~~~i~~  199 (232)
                      ..|++++++    ++++.||+++...++|+++++++ +.   .+.+..   .. ..|.+++++ ++.||+++..++.|.+
T Consensus       172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~  251 (314)
T 1pjx_A          172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence            679999999    88668999999899999998762 22   122222   12 679999997 6899999988899999


Q ss_pred             EeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751         200 ANKE-GERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       200 ~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ++++ |.....+..+   ...|.++++.++
T Consensus       252 ~d~~~g~~~~~~~~~---~~~~~~i~~~~d  278 (314)
T 1pjx_A          252 FGPDGGQPKMRIRCP---FEKPSNLHFKPQ  278 (314)
T ss_dssp             ECTTCBSCSEEEECS---SSCEEEEEECTT
T ss_pred             EcCCCCcEeEEEeCC---CCCceeEEECCC
Confidence            9998 6655555432   357888888544

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.74  E-value=8.3e-16  Score=124.49  Aligned_cols=192  Identities=13%  Similarity=0.165  Sum_probs=139.2

Q ss_pred             CeEEEEEeCCCCEEEEEEcC-----CCCcEEEEEcCCCceeEEEe-C-----CCCCccEEEEeecCCeEEEEeC---CCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVA-----DKSSIKRAHLDGKNVEDVIT-T-----NIRSPEGLTFDWVNRVLYWTDS---QMD   66 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~-----~~~~i~~~~~~g~~~~~~~~-~-----~~~~p~gl~~d~~~~~ly~~d~---~~~   66 (232)
                      .|.++++|+ +++|||+|..     .. +|.+++++.......+. .     ....+.++++|+.++.+|++|.   ..+
T Consensus        68 ~p~gv~~d~-~g~L~v~D~g~~~~~~~-~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~  145 (343)
T 2qe8_A           68 TVLGIKSDG-NGIVWMLDNGNQSKSVP-KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA  145 (343)
T ss_dssp             CEEEEEECS-SSEEEEEECHHHHTSCC-EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred             EeeEEEEcC-CCcEEEEcCCCCcCCCC-eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence            378999998 5899999976     46 89999998555323322 1     1246799999987789999998   778


Q ss_pred             eEEEEeCCCCCCEEEEeC-----------------------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751          67 TISMANLNDDQPKVIVSK-----------------------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN  117 (232)
Q Consensus        67 ~I~~~~~~g~~~~~~~~~-----------------------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~  117 (232)
                      .|.+++++......+...                             ....|++|++++.++.||+++..  ..++++++
T Consensus       146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~--~~~l~~~~  223 (343)
T 2qe8_A          146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH--STSMYRIK  223 (343)
T ss_dssp             EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS--CSEEEEEE
T ss_pred             eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC--CCeEEEEE
Confidence            999999874432222211                             01357999999977799999976  35788887


Q ss_pred             CC----CC--------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec-CCCceEEEec--CCCceEEEEE
Q psy5751         118 LD----GT--------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI-RNRVRRKVYS--NCTYPFGLSI  182 (232)
Q Consensus       118 ~~----g~--------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~-~g~~~~~~~~--~~~~p~gla~  182 (232)
                      .+    +.        ..... ..  ...|.|+++|++ +.||+++...++|.+++. +|. ...+..  .+..|.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~-g~--~g~pdgia~d~~-G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~  298 (343)
T 2qe8_A          224 SADLSNLQLTDAELGSKIERY-SE--KPICDGISIDKD-HNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNF  298 (343)
T ss_dssp             HHHHTCTTCCHHHHHTTCEEE-EE--CCSCSCEEECTT-CCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEE
T ss_pred             HHHhcCCCCChhhhhcceEec-cc--CCCCceEEECCC-CCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEE
Confidence            42    11        01111 12  348999999997 899999999999999999 664 444443  4788999999


Q ss_pred             E-CCEEEEEeCCCCcEEEEe
Q psy5751         183 T-DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       183 ~-~~~ly~td~~~~~i~~~~  201 (232)
                      . ++.||+++...+++..++
T Consensus       299 ~~~g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          299 GSDGYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             CTTSCEEEEECCGGGSGGGB
T ss_pred             CCCCcEEEEeCccccccccc
Confidence            6 789999998776654444

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=99.73  E-value=3.8e-14  Score=109.52  Aligned_cols=199  Identities=13%  Similarity=0.164  Sum_probs=146.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~   80 (232)
                      +.|+++++.+++||.+...+. +|++++++|.-.+.+-..+...++||+++. ++.+++++...+++++++++.... ..
T Consensus        29 lSGla~~~~~~~L~aV~d~~~-~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~  106 (255)
T 3qqz_A           29 ISSLTWSAQSNTLFSTINKPA-AIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKI  106 (255)
T ss_dssp             EEEEEEETTTTEEEEEEETTE-EEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred             cceeEEeCCCCEEEEEECCCC-eEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeee
Confidence            579999998999998776677 999999997655555445668999999996 567888988889999887765543 11


Q ss_pred             --EEeCCC-CCc-----eEEEEeCCCCeEEEEEcCCCCCcEEEEe--CCCCCcEEEEE-----cCCCCCcceEEEeCCCC
Q psy5751          81 --IVSKDL-VNP-----RGIVVHPYYRKLFWSDWNRSGPKIEWSN--LDGTDREIFLK-----AADLKLPNSLAVDFRTD  145 (232)
Q Consensus        81 --~~~~~~-~~p-----~~iavd~~~~~ly~~d~~~~~~~I~~~~--~~g~~~~~~~~-----~~~~~~p~~l~~d~~~~  145 (232)
                        .....+ ..|     .|||+|+.+++||.+.-.. ...|+..+  +.+...+++-.     ...+..+++|++|+.++
T Consensus       107 ~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg  185 (255)
T 3qqz_A          107 LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN  185 (255)
T ss_dssp             EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred             eeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence              111121 234     7999999888999987542 33678776  22233344321     11256789999999999


Q ss_pred             EEEEEECCCCcEEEEecCCCceEEE-ec--------CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         146 ELCWVDADSKSLECMTIRNRVRRKV-YS--------NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       146 ~Ly~~d~~~~~i~~~~~~g~~~~~~-~~--------~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +||+.......+..++.+|.-+..+ +.        ..+.|.|||++ +|+||++.-. +.+++|.+++
T Consensus       186 ~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~~~  253 (255)
T 3qqz_A          186 TLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTPQS  253 (255)
T ss_dssp             EEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC--
T ss_pred             eEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEecC
Confidence            9999999999999999998743333 22        24689999997 7899999665 6899998874

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=99.73  E-value=5.9e-15  Score=117.12  Aligned_cols=218  Identities=11%  Similarity=0.058  Sum_probs=154.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-------CCccEEEE---eecCCeEEE-EeC------
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-------RSPEGLTF---DWVNRVLYW-TDS------   63 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-------~~p~gl~~---d~~~~~ly~-~d~------   63 (232)
                      .|+++.||..++++|++++... +|.+++.++....++..+.+       ..+.||.+   |+. ++|++ ++.      
T Consensus        14 yPE~~~wd~~~g~~~vs~l~~g-~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~   91 (334)
T 2p9w_A           14 TPEDTIYDRTRQVFYQSNLYKG-RIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNF   91 (334)
T ss_dssp             CCSCEEEETTTTEEEEEETTTT-EEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCT
T ss_pred             CCcCccCcCCCCEEEEEeccCC-EEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccc
Confidence            3788999999999999999998 99999998665545533332       25789999   675 77887 552      


Q ss_pred             ------CCCeEEEEeCC----CCCCEEEE-e----C-------CCCCceEEEEeCCCCeEEEEEcCCCC-CcEEEEeCCC
Q psy5751          64 ------QMDTISMANLN----DDQPKVIV-S----K-------DLVNPRGIVVHPYYRKLFWSDWNRSG-PKIEWSNLDG  120 (232)
Q Consensus        64 ------~~~~I~~~~~~----g~~~~~~~-~----~-------~~~~p~~iavd~~~~~ly~~d~~~~~-~~I~~~~~~g  120 (232)
                            ....+.++|++    +.....+- .    .       ....+++|++|+ .|..|+++..  . +.|++++.+|
T Consensus        92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~--~~~~I~rV~pdG  168 (334)
T 2p9w_A           92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFAL--GMPAIARVSADG  168 (334)
T ss_dssp             TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEE--SSCEEEEECTTS
T ss_pred             cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCC--CCCeEEEEeCCC
Confidence                  24679999998    43332221 1    1       223589999997 8999999875  4 7799999999


Q ss_pred             CCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE-ec------CCCceEEE-EE-ECCEE
Q psy5751         121 TDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV-YS------NCTYPFGL-SI-TDEKY  187 (232)
Q Consensus       121 ~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~-~~------~~~~p~gl-a~-~~~~l  187 (232)
                      ..........    ....++||++++++..|++.+. .+++.+++++...+..+ .+      .+..|.+| +. .+|.+
T Consensus       169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v  247 (334)
T 2p9w_A          169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES  247 (334)
T ss_dssp             CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred             CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence            9666554321    1345889999999889999988 99999999984322112 22      46778996 55 46766


Q ss_pred             -EEEeCCCCcEEEEeCCCCCcceEEeccCCcce--eEEEEEE
Q psy5751         188 -YWTDWKTNRIESANKEGERAPSIALDMMGTTY--MYGIAAV  226 (232)
Q Consensus       188 -y~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~--p~gi~~~  226 (232)
                       ++++..++.+...+.++  ++........++.  +.|+++.
T Consensus       248 llV~~~~~~~~~l~S~Dg--W~sa~~~g~~~~~~~~~g~tt~  287 (334)
T 2p9w_A          248 VLVGARAPYAISFRSWDN--WKSANIKKTKRSELQNSGFTAV  287 (334)
T ss_dssp             EEEEEETTEEEEEECSST--TSEEEEEEEECGGGGSSCEEEE
T ss_pred             EEEEcCCCCEEEEECCCC--cceeEEeeeecCccccCceeEE
Confidence             99998778777778887  5544443322322  5666665

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.72  E-value=3.3e-15  Score=119.14  Aligned_cols=180  Identities=11%  Similarity=0.038  Sum_probs=132.2

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR  123 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~  123 (232)
                      ..|+++++|+ .++|||+|..+++|++++.+|... .... ....|.++++++ +|.||+++......+|++++......
T Consensus        32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~-~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~  107 (306)
T 2p4o_A           32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ-IHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTV  107 (306)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE-EEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceE-EEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeE
Confidence            6899999998 567999999999999999998543 3333 235799999998 67799999764344688887655555


Q ss_pred             EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE-----------ecCCCceEEEEEECCEEEEEeC
Q psy5751         124 EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV-----------YSNCTYPFGLSITDEKYYWTDW  192 (232)
Q Consensus       124 ~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~-----------~~~~~~p~gla~~~~~ly~td~  192 (232)
                      +.+........|+|+++.. ++++|++|...++|++++.++...+..           ...+..|.||..++++||+++.
T Consensus       108 ~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~  186 (306)
T 2p4o_A          108 ETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT  186 (306)
T ss_dssp             EEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET
T ss_pred             EEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC
Confidence            5555433356789999865 478999999899999999886532222           1245689999777889999999


Q ss_pred             CCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCC
Q psy5751         193 KTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       193 ~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      .+++|.+++.++ ......... .....|.||++.+++
T Consensus       187 ~~~~I~~~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG  223 (306)
T 2p4o_A          187 EKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEG  223 (306)
T ss_dssp             TTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTC
T ss_pred             CCCEEEEEEeCCCCCCCccEEE-eccCCCCCeEECCCC
Confidence            999999999874 221111110 112579999998765

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=99.72  E-value=1.8e-15  Score=122.42  Aligned_cols=202  Identities=13%  Similarity=0.071  Sum_probs=142.8

Q ss_pred             eEEEEEeCCCCEEEEEE------------cCCCCcEEEEEcCCC--ceeEEEeCC------CCCccEEEEeec---CCeE
Q psy5751           2 LIGITVDCVEGQVYYSS------------VADKSSIKRAHLDGK--NVEDVITTN------IRSPEGLTFDWV---NRVL   58 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d------------~~~~~~i~~~~~~g~--~~~~~~~~~------~~~p~gl~~d~~---~~~l   58 (232)
                      |+.|++++ ++.+|.+.            ...+ +|++++++..  ..+++...+      ...|.||.+...   ...|
T Consensus        52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G-~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L  129 (355)
T 3sre_A           52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSG-KILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL  129 (355)
T ss_dssp             CCEEEECT-TSEEEEEECCC-----------CC-EEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred             cceeEEcC-CCeEEEEeccccCCCcccCCCCCC-eEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence            57888887 79999986            1334 8999999832  333333322      248999999662   3379


Q ss_pred             EEEeCC--CCe--EEEEeCCCCCCEEEEe---CCCCCceEEEEeCCCCeEEEEEcC---------------CCCCcEEEE
Q psy5751          59 YWTDSQ--MDT--ISMANLNDDQPKVIVS---KDLVNPRGIVVHPYYRKLFWSDWN---------------RSGPKIEWS  116 (232)
Q Consensus        59 y~~d~~--~~~--I~~~~~~g~~~~~~~~---~~~~~p~~iavd~~~~~ly~~d~~---------------~~~~~I~~~  116 (232)
                      |+++..  ...  |++.+.++.....+..   ..+..|+++++++ .|.+|+++..               ...++++++
T Consensus       130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~  208 (355)
T 3sre_A          130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY  208 (355)
T ss_dssp             EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred             EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence            999877  334  5566666544332222   5688999999998 7898888641               234678888


Q ss_pred             eCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC----ceEEEecCCCceEEEEEE-C-CEEEEE
Q psy5751         117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR----VRRKVYSNCTYPFGLSIT-D-EKYYWT  190 (232)
Q Consensus       117 ~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~----~~~~~~~~~~~p~gla~~-~-~~ly~t  190 (232)
                      +..  ..+++...  +..||||+++++++.||++|+..++|++++++..    .++.+ .....|+|++++ + |+||++
T Consensus       209 d~~--~~~~~~~~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva  283 (355)
T 3sre_A          209 SPN--DVRVVAEG--FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVG  283 (355)
T ss_dssp             CTT--CCEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred             ECC--eEEEeecC--CcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence            763  45555555  8899999999999999999999999999998732    22334 445789999998 4 899995


Q ss_pred             -eCCCCcEEEEeCC---CCCcceEE
Q psy5751         191 -DWKTNRIESANKE---GERAPSIA  211 (232)
Q Consensus       191 -d~~~~~i~~~~~~---g~~~~~i~  211 (232)
                       .+...+|.+++|+   ++.+-.|+
T Consensus       284 ~~~~g~~v~~~~P~~~~~s~v~rI~  308 (355)
T 3sre_A          284 CHPNGMRIFFYDAENPPGSEVLRIQ  308 (355)
T ss_dssp             EESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred             ecCCceEEEEECCCCCCCCEEEEEE
Confidence             5676778777777   44444444

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.71  E-value=5.3e-14  Score=113.16  Aligned_cols=219  Identities=9%  Similarity=0.105  Sum_probs=160.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-CC--------CccEEEEeecCCeEEEEeC-CCCeEEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-IR--------SPEGLTFDWVNRVLYWTDS-QMDTISMA   71 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-~~--------~p~gl~~d~~~~~ly~~d~-~~~~I~~~   71 (232)
                      |.++++++..+.+|+++..++ .|..++++.......+... ..        .|.++++++.++.+|+++. ..+.|++.
T Consensus        91 ~~~~~~s~dg~~l~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~  169 (353)
T 3vgz_A           91 PFGATINNTTQTLWFGNTVNS-AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV  169 (353)
T ss_dssp             CCSEEEETTTTEEEEEETTTT-EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred             cceEEECCCCCEEEEEecCCC-EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence            457889998889999999888 9999999865543333321 11        2789999998899999984 46789999


Q ss_pred             eCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEE
Q psy5751          72 NLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        72 ~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly  148 (232)
                      ++........+......|.+++++|.++.||+++.   .+.|...++............   ....|.++++++++++||
T Consensus       170 d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~  246 (353)
T 3vgz_A          170 DGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF  246 (353)
T ss_dssp             ETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred             cCCCCceEEEecCCCCccceEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence            99876554444424456999999998888999875   457888888765444333321   144677899999999999


Q ss_pred             EEECCCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCC-CcceEEeccCCcceeEEEEE
Q psy5751         149 WVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGE-RAPSIALDMMGTTYMYGIAA  225 (232)
Q Consensus       149 ~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~-~~~~i~~~~~~~~~p~gi~~  225 (232)
                      +++...+.|..++++..+...... ...|.++++.  ++++|+++...+.|..++..+. ....+.    ....|.++++
T Consensus       247 ~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~  321 (353)
T 3vgz_A          247 ITDSKAAEVLVVDTRNGNILAKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD----TPTHPNSLAL  321 (353)
T ss_dssp             EEESSSSEEEEEETTTCCEEEEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE----CCSEEEEEEE
T ss_pred             EEeCCCCEEEEEECCCCcEEEEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe----cCCCCCeEEE
Confidence            999888999999997655433322 3446778885  5679999998999999998743 333332    2447888888


Q ss_pred             EcCC
Q psy5751         226 VPSS  229 (232)
Q Consensus       226 ~~~~  229 (232)
                      .+++
T Consensus       322 s~dg  325 (353)
T 3vgz_A          322 SADG  325 (353)
T ss_dssp             CTTS
T ss_pred             cCCC
Confidence            7654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.70  E-value=1.5e-13  Score=110.50  Aligned_cols=217  Identities=13%  Similarity=0.137  Sum_probs=158.6

Q ss_pred             eEEEEEeCCCCEEEEEEcC------CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVA------DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~------~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      |.++++++..+.||+++..      .+ .|+.++.+.......+.. ...|.++++++.++.+|+++...+.|.+++..+
T Consensus        43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~-~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~  120 (353)
T 3vgz_A           43 AYEMAYSQQENALWLATSQSRKLDKGG-VVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT  120 (353)
T ss_dssp             EEEEEEETTTTEEEEEECCCTTTEESE-EEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             ccceEECCCCCEEEEEcCCCcCCCCCc-cEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence            6789999988999999966      44 799999886654344433 246999999998888999999889999999987


Q ss_pred             CCCEEEEeC-CCC--------CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751          76 DQPKVIVSK-DLV--------NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        76 ~~~~~~~~~-~~~--------~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~  146 (232)
                      ......+.. ...        .|.+++++|.++.||+++... .++|+..++........+... ...|.++++++++++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~  198 (353)
T 3vgz_A          121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-ESVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKR  198 (353)
T ss_dssp             CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-SCEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTE
T ss_pred             CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-CceEEEEcCCCCceEEEecCC-CCccceEEECCCCCE
Confidence            665444432 211        278999999888999998642 567999998766544444322 456999999999899


Q ss_pred             EEEEECCCCcEEEEecCCCceEEEec-----CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcc
Q psy5751         147 LCWVDADSKSLECMTIRNRVRRKVYS-----NCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTT  218 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~g~~~~~~~~-----~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~  218 (232)
                      ||+++. .+.|..+++...+......     ....+.++++.  ++.||+++...+.|..++..+ +..+.+..     .
T Consensus       199 l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----~  272 (353)
T 3vgz_A          199 LYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA-----P  272 (353)
T ss_dssp             EEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC-----S
T ss_pred             EEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-----C
Confidence            999875 6789999988665433322     23456788885  668999999889999999874 43333432     2


Q ss_pred             eeEEEEEEcC
Q psy5751         219 YMYGIAAVPS  228 (232)
Q Consensus       219 ~p~gi~~~~~  228 (232)
                      .|.++++.++
T Consensus       273 ~~~~~~~s~d  282 (353)
T 3vgz_A          273 ESLAVLFNPA  282 (353)
T ss_dssp             SCCCEEEETT
T ss_pred             CCceEEECCC
Confidence            3456666554

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=99.69  E-value=1.1e-13  Score=111.63  Aligned_cols=222  Identities=14%  Similarity=0.128  Sum_probs=154.7

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE------eCCCCCccEEEEee---cCCeEEEEeC--CCCeEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI------TTNIRSPEGLTFDW---VNRVLYWTDS--QMDTIS   69 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~------~~~~~~p~gl~~d~---~~~~ly~~d~--~~~~I~   69 (232)
                      .|.+|++.+ ++.||++....+ +|+++..++.....+.      ..+...+.||++++   .++.||++.+  ..++|.
T Consensus        33 ~P~~ia~~p-dG~llVter~~G-~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           33 SPWGLAPLP-GGDLLVSSRDEA-TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             SEEEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CceEEEEcC-CCcEEEEEecCC-EEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            478999998 678999998667 8999987644433332      12456889999997   3688998653  457899


Q ss_pred             EEeCCCC--------CCEEEEe----CCCCCceEEEEeCCCCeEEEEEcC-----------CCCCcEEEEeCCCC-----
Q psy5751          70 MANLNDD--------QPKVIVS----KDLVNPRGIVVHPYYRKLFWSDWN-----------RSGPKIEWSNLDGT-----  121 (232)
Q Consensus        70 ~~~~~g~--------~~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~-----------~~~~~I~~~~~~g~-----  121 (232)
                      +..+++.        ..++++.    .......+|++++ .|.||++...           ...++|.|++.+|+     
T Consensus       111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n  189 (347)
T 3das_A          111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN  189 (347)
T ss_dssp             EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred             EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence            9988762        2455554    2334567899998 7899999531           12589999999987     


Q ss_pred             ---CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCce------------------EEEecCCCce
Q psy5751         122 ---DREIFLKAADLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRVR------------------RKVYSNCTYP  177 (232)
Q Consensus       122 ---~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~~------------------~~~~~~~~~p  177 (232)
                         ..++....  +.+|.||++|++ +.||++|.+..   +|.++.. |.+-                  ..+......|
T Consensus       190 Pf~~~~i~a~G--~RNp~Gla~dp~-G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap  265 (347)
T 3das_A          190 PFPGSPVYSYG--HRNVQGLAWDDK-QRLFASEFGQDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP  265 (347)
T ss_dssp             SSTTCCEEEBC--CSBCCEEEECTT-CCEEEEECCSSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred             CCCCCeEEeeC--CCCcceEEECCC-CCEEEEecCCCCCceeeEEcC-CCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence               44555444  889999999995 99999998753   4555532 2210                  0001112478


Q ss_pred             EEEEEECCEEEEEeCCCCcEEEEeCCCCC--cceEEeccCCcceeEEEEEEcCC
Q psy5751         178 FGLSITDEKYYWTDWKTNRIESANKEGER--APSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       178 ~gla~~~~~ly~td~~~~~i~~~~~~g~~--~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      .|+++.++.+|.+.....+|.++..++..  .+...+-......|.+|++.+++
T Consensus       266 ~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG  319 (347)
T 3das_A          266 SGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD  319 (347)
T ss_dssp             EEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT
T ss_pred             cceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC
Confidence            99999999999999999999999887542  12112211235679999988764

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=99.69  E-value=1.1e-14  Score=118.35  Aligned_cols=222  Identities=9%  Similarity=0.080  Sum_probs=150.9

Q ss_pred             CeEEEEEeCCCCE-EEEEEcCCCCcEEEEEcCCCceeEE------EeCCCCCccEEEEeec---CCeEEEEeCC------
Q psy5751           1 MLIGITVDCVEGQ-VYYSSVADKSSIKRAHLDGKNVEDV------ITTNIRSPEGLTFDWV---NRVLYWTDSQ------   64 (232)
Q Consensus         1 ~~~~i~~d~~~~~-ly~~d~~~~~~i~~~~~~g~~~~~~------~~~~~~~p~gl~~d~~---~~~ly~~d~~------   64 (232)
                      .|.+|++++ +++ ||+++.. + +|++++.+|...+.+      .......+.+|++++.   ++.||+++..      
T Consensus        19 ~P~~i~~~p-dG~~l~V~e~~-G-~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~   95 (353)
T 2g8s_A           19 HPWALAFLP-DNHGMLITLRG-G-ELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK   95 (353)
T ss_dssp             SEEEEEECS-TTCCEEEEETT-T-EEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred             CcEEEEEcC-CCCEEEEEeCC-c-eEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence            488999998 566 9999974 5 899998766432111      1223356789999985   7899999754      


Q ss_pred             -CCeEEEEeCCCC-----CCEEEEeC------CCCCceEEEEeCCCCeEEEEEcCCC-----------CCcEEEEeCCCC
Q psy5751          65 -MDTISMANLNDD-----QPKVIVSK------DLVNPRGIVVHPYYRKLFWSDWNRS-----------GPKIEWSNLDGT  121 (232)
Q Consensus        65 -~~~I~~~~~~g~-----~~~~~~~~------~~~~p~~iavd~~~~~ly~~d~~~~-----------~~~I~~~~~~g~  121 (232)
                       ..+|.+.++++.     ..++++..      ....+.+|+++| +|.||++.....           .++|.|++.+|.
T Consensus        96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~  174 (353)
T 2g8s_A           96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE  174 (353)
T ss_dssp             EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred             ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence             457998887654     23444431      234578999998 789999974321           468999999987


Q ss_pred             -------------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC---cEEEEecCCCce------------------
Q psy5751         122 -------------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSK---SLECMTIRNRVR------------------  167 (232)
Q Consensus       122 -------------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~---~i~~~~~~g~~~------------------  167 (232)
                                   ..++....  +.+|.+|++|+.+++||++|....   +|.++... .+.                  
T Consensus       175 ~p~~npf~~~~~~~~~i~a~G--~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G-~nyGwp~~~~~~~~~~~~~~~  251 (353)
T 2g8s_A          175 IPDDNPFIKESGVRAEIWSYG--IRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKG-KNYGWPLATWGINYSGFKIPE  251 (353)
T ss_dssp             CCTTCTTTTSTTSCTTEEEEC--CSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTT-CBCCTTTBCSSBCTTSSCCTT
T ss_pred             CCCCCCCcCCCCCCccEEEEc--CcCccceEEECCCCCEEEEecCCCCCcEEeEeccC-CcCCCCCccCCCCCCCCccCc
Confidence                         34555544  789999999997799999998743   44444221 110                  


Q ss_pred             ------------EEEecCCCceEEEEEE--------CCEEEEEeCCCCcEEEEeCCCCCcc-eEEeccCCcceeEEEEEE
Q psy5751         168 ------------RKVYSNCTYPFGLSIT--------DEKYYWTDWKTNRIESANKEGERAP-SIALDMMGTTYMYGIAAV  226 (232)
Q Consensus       168 ------------~~~~~~~~~p~gla~~--------~~~ly~td~~~~~i~~~~~~g~~~~-~i~~~~~~~~~p~gi~~~  226 (232)
                                  .........|.|+++.        ++.+|++++..++|.++..++.... ...+-......|.+|++.
T Consensus       252 ~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~  331 (353)
T 2g8s_A          252 AKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG  331 (353)
T ss_dssp             CCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred             ccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence                        0001122468899985        4899999999999999998854221 111111113479999988


Q ss_pred             cCC
Q psy5751         227 PSS  229 (232)
Q Consensus       227 ~~~  229 (232)
                      +++
T Consensus       332 pdG  334 (353)
T 2g8s_A          332 PDG  334 (353)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            765

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.67  E-value=2e-13  Score=109.04  Aligned_cols=218  Identities=10%  Similarity=-0.007  Sum_probs=153.1

Q ss_pred             EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC-EEEEeC
Q psy5751           6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP-KVIVSK   84 (232)
Q Consensus         6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~   84 (232)
                      .|+...+.+|+++..++ .|..++++.......+......| ++++++.++.||+++...+.|+++++++... ..... 
T Consensus         4 ~~~~~~~~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-   80 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLR-RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-   80 (331)
T ss_dssp             ---CCCCEEEEEEGGGT-EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-
T ss_pred             eEcCCCCEEEEEecCCC-eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-
Confidence            36667899999999888 99999998666545555555566 9999998888999999889999999987765 44443 


Q ss_pred             CCCCceE-EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc-EEEEec
Q psy5751          85 DLVNPRG-IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS-LECMTI  162 (232)
Q Consensus        85 ~~~~p~~-iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~-i~~~~~  162 (232)
                      ....|.. ++++|.++.||........+.|...+++.......+..  ...|.++++++++++||+++...+. |...++
T Consensus        81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~  158 (331)
T 3u4y_A           81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKI  158 (331)
T ss_dssp             ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred             cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence            3456777 99999777888333221122899999886654444433  5678999999998889999988777 777666


Q ss_pred             CCCce-----EEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCc-ceEEeccCCcceeEEEEEEcCC
Q psy5751         163 RNRVR-----RKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERA-PSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       163 ~g~~~-----~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~-~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +....     .........|.++++.  +.+||++....+.|..++...... +.+.. ......|.++++-+++
T Consensus       159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~~~spdg  232 (331)
T 3u4y_A          159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA-VGTNNLPGTIVVSRDG  232 (331)
T ss_dssp             CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE-EECSSCCCCEEECTTS
T ss_pred             CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee-ccCCCCCceEEECCCC
Confidence            53221     1223445668999995  447999999999999999874332 11111 1123567777776654

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.67  E-value=5.6e-14  Score=111.02  Aligned_cols=185  Identities=11%  Similarity=0.095  Sum_probs=136.1

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS  116 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~  116 (232)
                      +.+......|+++++|+.++.|||++...+.|++++.++. ...+ ......|.++++++ +|.||+++..  ...|.++
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~-~~~~~~~~~l~~~~-dg~l~v~~~~--~~~i~~~   95 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPE-MHPSHHQNGHCLNK-QGHLIACSHG--LRRLERQ   95 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEE-ESSCSSEEEEEECT-TCCEEEEETT--TTEEEEE
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEE-ECCCCCcceeeECC-CCcEEEEecC--CCeEEEE
Confidence            4555667899999999988789999999999999999987 4333 34567899999998 7889999864  4579999


Q ss_pred             eCCCCCcEEEEEc---CCCCCcceEEEeCCCCEEEEEEC-----------------CCCcEEEEecCCCceEEEecCCCc
Q psy5751         117 NLDGTDREIFLKA---ADLKLPNSLAVDFRTDELCWVDA-----------------DSKSLECMTIRNRVRRKVYSNCTY  176 (232)
Q Consensus       117 ~~~g~~~~~~~~~---~~~~~p~~l~~d~~~~~Ly~~d~-----------------~~~~i~~~~~~g~~~~~~~~~~~~  176 (232)
                      +......+.+...   .....|+++++|++ ++||++|.                 ..+.|++++.+ +..+.+...+..
T Consensus        96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~  173 (296)
T 3e5z_A           96 REPGGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK  173 (296)
T ss_dssp             CSTTCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred             cCCCCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence            9844444444321   11457899999996 78999875                 24589999988 445556678889


Q ss_pred             eEEEEEE-CCEEEEEeCCCCcEEEEeCC--CCC-cceEEeccCCcceeEEEEEEcCC
Q psy5751         177 PFGLSIT-DEKYYWTDWKTNRIESANKE--GER-APSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       177 p~gla~~-~~~ly~td~~~~~i~~~~~~--g~~-~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      |.|+++. ++.++|++...++|.+++.+  |.. ...-.+ ......|.+|++.+++
T Consensus       174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G  229 (296)
T 3e5z_A          174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGG  229 (296)
T ss_dssp             EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTS
T ss_pred             CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCC
Confidence            9999995 44444999999999999875  332 111111 2345678899887765

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=99.66  E-value=3.1e-14  Score=115.80  Aligned_cols=188  Identities=20%  Similarity=0.223  Sum_probs=132.4

Q ss_pred             eEEEEEeCC---CCEEEEEEcCC-----CCcEEEEEcCCCc---eeEEEe------CCCCCccEEEEeecCCeEEEEeCC
Q psy5751           2 LIGITVDCV---EGQVYYSSVAD-----KSSIKRAHLDGKN---VEDVIT------TNIRSPEGLTFDWVNRVLYWTDSQ   64 (232)
Q Consensus         2 ~~~i~~d~~---~~~ly~~d~~~-----~~~i~~~~~~g~~---~~~~~~------~~~~~p~gl~~d~~~~~ly~~d~~   64 (232)
                      |.+|++++.   ++.||+++...     . +|.+++.++..   .+.++.      .....+.+|++++ .+.||+++..
T Consensus        77 p~gia~~pdf~~~g~lYv~~~~~~~~~~~-~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~  154 (352)
T 2ism_A           77 LLGLALHPRFPQEPYVYAYRTVAEGGLRN-QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGE  154 (352)
T ss_dssp             EEEEEECTTTTTSCEEEEEEEECTTSSEE-EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCC
T ss_pred             ceeEEECCCCCCCCEEEEEEecCCCCCcc-EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECC
Confidence            789999986   68999998754     5 89999988642   223332      1235788999999 4589999742


Q ss_pred             -------------CCeEEEEeCCCC-------------CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC------Cc
Q psy5751          65 -------------MDTISMANLNDD-------------QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG------PK  112 (232)
Q Consensus        65 -------------~~~I~~~~~~g~-------------~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~------~~  112 (232)
                                   .++|++++.+|.             ..++.. ..+.+|.++++|+.++.||+++.+...      -+
T Consensus       155 ~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de  233 (352)
T 2ism_A          155 VYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYS-LGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE  233 (352)
T ss_dssp             TTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEE-ECCSEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred             CCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEE-EcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence                         368999999983             333433 367889999999988999999987432      13


Q ss_pred             EEEEeCCCC--------------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc-------eEEEe
Q psy5751         113 IEWSNLDGT--------------DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV-------RRKVY  171 (232)
Q Consensus       113 I~~~~~~g~--------------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~-------~~~~~  171 (232)
                      |.++...+.              ....+..-.....|.|+++.  .+.||+++...++|.++++++..       ...+.
T Consensus       234 i~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~  311 (352)
T 2ism_A          234 VNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL  311 (352)
T ss_dssp             EEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             EEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheec
Confidence            555543220              01111111114578999994  48999999999999999998543       23344


Q ss_pred             cCCCceEEEEEE-CCEEEEEeCCC
Q psy5751         172 SNCTYPFGLSIT-DEKYYWTDWKT  194 (232)
Q Consensus       172 ~~~~~p~gla~~-~~~ly~td~~~  194 (232)
                      .....|.++++. ++.||++++..
T Consensus       312 ~~~~rp~~v~~~pdG~lyv~~~~~  335 (352)
T 2ism_A          312 SGFGRLREVQVGPDGALYVTTSNR  335 (352)
T ss_dssp             ESSCCEEEEEECTTSCEEEEECST
T ss_pred             ccCCCeeEEEECCCCcEEEEEeCC
Confidence            556789999996 78999998753

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.65  E-value=9.2e-14  Score=110.16  Aligned_cols=185  Identities=13%  Similarity=0.094  Sum_probs=136.0

Q ss_pred             eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEE
Q psy5751          36 EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW  115 (232)
Q Consensus        36 ~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~  115 (232)
                      +.++.....-++|.+.++..+.|||+|...++|++++.++.....+ . ....|.++++++ +|.||++.    ...|++
T Consensus         5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~-~~~~~~~i~~~~-dG~l~v~~----~~~l~~   77 (297)
T 3g4e_A            5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-T-MDAPVSSVALRQ-SGGYVATI----GTKFCA   77 (297)
T ss_dssp             EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-E-CSSCEEEEEEBT-TSSEEEEE----TTEEEE
T ss_pred             EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-e-CCCceEEEEECC-CCCEEEEE----CCeEEE
Confidence            3455567788999999998899999999999999999988665433 2 235799999998 56688876    246999


Q ss_pred             EeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-----------CCCcEEEEecCCCceEEEecCCCceEEEE
Q psy5751         116 SNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDA-----------DSKSLECMTIRNRVRRKVYSNCTYPFGLS  181 (232)
Q Consensus       116 ~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~-----------~~~~i~~~~~~g~~~~~~~~~~~~p~gla  181 (232)
                      ++.++...+.+....   ....|+++++|++ ++||+++.           ..+.|++++.+|. ...+...+..|.|++
T Consensus        78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~  155 (297)
T 3g4e_A           78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLD  155 (297)
T ss_dssp             EETTTTEEEEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEE
T ss_pred             EECCCCcEEEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceE
Confidence            998876666555431   1345899999997 77999873           3458999988764 444566778899999


Q ss_pred             EE--CCEEEEEeCCCCcEEEEeCC---CCCc--ceEEeccCCcceeEEEEEEcCC
Q psy5751         182 IT--DEKYYWTDWKTNRIESANKE---GERA--PSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       182 ~~--~~~ly~td~~~~~i~~~~~~---g~~~--~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +.  +..|||++...++|.+++.+   |...  +.+.........|.|+++..++
T Consensus       156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G  210 (297)
T 3g4e_A          156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG  210 (297)
T ss_dssp             ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred             EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence            95  55899999999999999864   3211  1222111234689999998765

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=99.64  E-value=2.2e-13  Score=110.82  Aligned_cols=200  Identities=16%  Similarity=0.172  Sum_probs=139.3

Q ss_pred             eEEEEEeCC---CCEEEEEEcC---C----CCcEEEEEcCCC-----ceeEEEe----CCCCCccEEEEeecCCeEEEEe
Q psy5751           2 LIGITVDCV---EGQVYYSSVA---D----KSSIKRAHLDGK-----NVEDVIT----TNIRSPEGLTFDWVNRVLYWTD   62 (232)
Q Consensus         2 ~~~i~~d~~---~~~ly~~d~~---~----~~~i~~~~~~g~-----~~~~~~~----~~~~~p~gl~~d~~~~~ly~~d   62 (232)
                      |.+|++++.   ++.||+++..   .    . +|.|+..++.     ..+.++.    .....+.+|++++ .+.||++.
T Consensus        75 ~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~-~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~  152 (354)
T 3a9g_A           75 LLGLALHPEFPKKSWVYLYASYFAEGGHIRN-RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITT  152 (354)
T ss_dssp             EEEEEECTTTTTSCEEEEEEEEECGGGCEEE-EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEEC
T ss_pred             eeeEEeCCCCCcCCEEEEEEeccCCCCCcce-EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEE
Confidence            679999986   7999999863   2    4 8999998865     1223322    2245688999998 56799996


Q ss_pred             CC-------------CCeEEEEeCCCCC--------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC-CcEEEEeCCC
Q psy5751          63 SQ-------------MDTISMANLNDDQ--------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG-PKIEWSNLDG  120 (232)
Q Consensus        63 ~~-------------~~~I~~~~~~g~~--------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~-~~I~~~~~~g  120 (232)
                      ..             .++|++++.+|..        .++. ...+.+|.+|++|+.++.||+++.+... ..|.++...+
T Consensus       153 G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~-a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~  231 (354)
T 3a9g_A          153 GDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIW-SYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGG  231 (354)
T ss_dssp             CCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEE-EECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTC
T ss_pred             CCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEE-EEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCC
Confidence            32             3689999999973        3343 4478899999999988999999976432 2355444211


Q ss_pred             C--------------CcEEEEEc-CCCCCcceEEEeC------CCCEEEEEECCCCcEEEEecCCCc-e---EEEec-CC
Q psy5751         121 T--------------DREIFLKA-ADLKLPNSLAVDF------RTDELCWVDADSKSLECMTIRNRV-R---RKVYS-NC  174 (232)
Q Consensus       121 ~--------------~~~~~~~~-~~~~~p~~l~~d~------~~~~Ly~~d~~~~~i~~~~~~g~~-~---~~~~~-~~  174 (232)
                      .              ....+..- .....|.|+++..      ..+.||+++...++|+++++++.. .   +.+.. ..
T Consensus       232 nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~  311 (354)
T 3a9g_A          232 NYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVF  311 (354)
T ss_dssp             BCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTS
T ss_pred             cCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCC
Confidence            0              01111111 1145799999931      358999999999999999998532 2   33443 36


Q ss_pred             CceEEEEEE-CCEEEEEeCC-CC---------cEEEEeCCC
Q psy5751         175 TYPFGLSIT-DEKYYWTDWK-TN---------RIESANKEG  204 (232)
Q Consensus       175 ~~p~gla~~-~~~ly~td~~-~~---------~i~~~~~~g  204 (232)
                      ..|.++++. ++.||++++. .+         +|+|+.+.+
T Consensus       312 ~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g  352 (354)
T 3a9g_A          312 GRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ  352 (354)
T ss_dssp             CCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred             CCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence            789999996 7899999873 44         788877654

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.63  E-value=1.2e-13  Score=109.87  Aligned_cols=185  Identities=15%  Similarity=0.164  Sum_probs=134.0

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS  116 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~  116 (232)
                      +.+..+...++|.+.++.++.|||++..+++|++.+.+|. ...+. .....|+++++++ +|.||+++..  ...|.++
T Consensus        38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~-~~~~~~~gl~~d~-dG~l~v~~~~--~~~v~~~  112 (305)
T 3dr2_A           38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLL-DATAFTNGNAVDA-QQRLVHCEHG--RRAITRS  112 (305)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEE-ESCSCEEEEEECT-TSCEEEEETT--TTEEEEE
T ss_pred             EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEe-CCCCccceeeECC-CCCEEEEECC--CCEEEEE
Confidence            4455677899999999988889999999999999999765 33333 3456799999998 7889999865  4579999


Q ss_pred             eCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-----------------CCCcEEEEecCCCceEEEecCCCc
Q psy5751         117 NLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDA-----------------DSKSLECMTIRNRVRRKVYSNCTY  176 (232)
Q Consensus       117 ~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~-----------------~~~~i~~~~~~g~~~~~~~~~~~~  176 (232)
                      +.+|. .+.+....   .+..|+++++|++ ++||++|.                 ..+.|++++++++..+.+. .+..
T Consensus       113 ~~~g~-~~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~  189 (305)
T 3dr2_A          113 DADGQ-AHLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH  189 (305)
T ss_dssp             CTTSC-EEEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred             CCCCC-EEEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence            98855 44443211   1457999999996 78999874                 1357999999766555555 7788


Q ss_pred             eEEEEEE--CCEEEEEeCCC-----CcEEEEeCCCCCcceEE-eccCCcceeEEEEEEcCC
Q psy5751         177 PFGLSIT--DEKYYWTDWKT-----NRIESANKEGERAPSIA-LDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       177 p~gla~~--~~~ly~td~~~-----~~i~~~~~~g~~~~~i~-~~~~~~~~p~gi~~~~~~  229 (232)
                      |.|+++.  +..||+++...     +.|.+++.++....... +.......|.||++..++
T Consensus       190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G  250 (305)
T 3dr2_A          190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGG  250 (305)
T ss_dssp             EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTS
T ss_pred             CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCC
Confidence            9999995  45799999874     78999987743322111 111234568888887654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.62  E-value=1.9e-12  Score=100.55  Aligned_cols=192  Identities=12%  Similarity=0.010  Sum_probs=138.5

Q ss_pred             eEEEEEeCCCCEEEEEEc--CCCCcEEEEEcCCCceeEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSV--ADKSSIKRAHLDGKNVEDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~--~~~~~i~~~~~~g~~~~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      |.|++|++. ++||++.-  ..+ .|.++++........+ ......+.|++++  ++.||++....+.++++|.+....
T Consensus        23 ~~Gl~~~~d-g~Lyvstg~~~~s-~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v   98 (266)
T 2iwa_A           23 TQGLVYAEN-DTLFESTGLYGRS-SVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN   98 (266)
T ss_dssp             EEEEEECST-TEEEEEECSTTTC-EEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred             cccEEEeCC-CeEEEECCCCCCC-EEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence            679999974 79999974  345 8999999866543333 2333466677887  689999999999999999886544


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCC
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      ...+...  .|.+..+.+.+++||+++ +  .++|..++.+......-+...    .+..|+++.+.  +++||.+....
T Consensus        99 ~~~i~~g--~~~g~glt~Dg~~l~vs~-g--s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~  171 (266)
T 2iwa_A           99 IKNFTHQ--MKDGWGLATDGKILYGSD-G--TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQT  171 (266)
T ss_dssp             EEEEECC--SSSCCEEEECSSSEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS
T ss_pred             EEEEECC--CCCeEEEEECCCEEEEEC-C--CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCC
Confidence            3334322  244444444489999998 3  468999998775543332211    14578999988  47999999889


Q ss_pred             CcEEEEecCCCceE-EE-ecC------------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751         155 KSLECMTIRNRVRR-KV-YSN------------CTYPFGLSIT--DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       155 ~~i~~~~~~g~~~~-~~-~~~------------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +.|.++|+...+.. .+ ...            ...|.|||++  .+++|+|....++++.++...
T Consensus       172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~  237 (266)
T 2iwa_A          172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL  237 (266)
T ss_dssp             SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred             CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence            99999999876653 33 221            1468999997  569999999999999888653

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.61  E-value=2.2e-13  Score=108.04  Aligned_cols=194  Identities=13%  Similarity=0.165  Sum_probs=139.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE-EeC----CCCCccEEEEeecCCeEEEEeCCC-----------
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV-ITT----NIRSPEGLTFDWVNRVLYWTDSQM-----------   65 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~-~~~----~~~~p~gl~~d~~~~~ly~~d~~~-----------   65 (232)
                      |.++.+++..+.||+++.. + .|++++.+ .....+ ...    ....|.++++|+ .++||+++...           
T Consensus        73 ~~~i~~~~~~g~l~v~~~~-~-~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~  148 (314)
T 1pjx_A           73 PAGCQCDRDANQLFVADMR-L-GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSM  148 (314)
T ss_dssp             EEEEEECSSSSEEEEEETT-T-EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTT
T ss_pred             CceEEEecCCCcEEEEECC-C-CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccc
Confidence            6789999854899999864 3 69999988 343333 211    124689999998 56799998764           


Q ss_pred             ----CeEEEEeCCCCCCEEEEeCCCCCceEEEEe----CCCCeEEEEEcCCCCCcEEEEeCCCCCc----EEEEEcC-CC
Q psy5751          66 ----DTISMANLNDDQPKVIVSKDLVNPRGIVVH----PYYRKLFWSDWNRSGPKIEWSNLDGTDR----EIFLKAA-DL  132 (232)
Q Consensus        66 ----~~I~~~~~~g~~~~~~~~~~~~~p~~iavd----~~~~~ly~~d~~~~~~~I~~~~~~g~~~----~~~~~~~-~~  132 (232)
                          +.|++++.++.. ..+.. ....|.+++++    +.++.||+++..  .++|++.++++...    ..+.... ..
T Consensus       149 ~~~~~~l~~~~~~g~~-~~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~  224 (314)
T 1pjx_A          149 QEKFGSIYCFTTDGQM-IQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTH  224 (314)
T ss_dssp             SSSCEEEEEECTTSCE-EEEEE-EESSEEEEEEEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred             cCCCCeEEEECCCCCE-EEecc-CCCCcceEEEecccCCCCCEEEEEECC--CCeEEEEECCCCCccccceEEEECCCCC
Confidence                689999988543 33332 45678999999    855689999865  46788888652221    1222211 01


Q ss_pred             -CCcceEEEeCCCCEEEEEECCCCcEEEEecC-CCceEEEecCCCceEEEEEE-CC-EEEEEeCCCCcEEEEeCCC
Q psy5751         133 -KLPNSLAVDFRTDELCWVDADSKSLECMTIR-NRVRRKVYSNCTYPFGLSIT-DE-KYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       133 -~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~-g~~~~~~~~~~~~p~gla~~-~~-~ly~td~~~~~i~~~~~~g  204 (232)
                       ..|.++++|++ +.||+++...+.|.+++++ |.....+......|.++++. ++ .||+++..++.|.+++...
T Consensus       225 ~~~p~~i~~d~~-G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          225 EGGADGMDFDED-NNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             SCEEEEEEEBTT-CCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCCCCceEECCC-CCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence             56999999996 7999999888899999998 55444444444778999985 44 5999999888999999873

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.61  E-value=1.1e-12  Score=104.69  Aligned_cols=197  Identities=9%  Similarity=0.025  Sum_probs=144.7

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccE-EEEeecCCeEEEEeCCC-C--eEEEEeCCCCCC
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEG-LTFDWVNRVLYWTDSQM-D--TISMANLNDDQP   78 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~g-l~~d~~~~~ly~~d~~~-~--~I~~~~~~g~~~   78 (232)
                      ++++++..+.||+++...+ .|++++++.... ...+... ..|.. +++++.++.|| +.... +  .|.+.+++....
T Consensus        44 ~~~~s~dg~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~  120 (331)
T 3u4y_A           44 DTAITSDCSNVVVTSDFCQ-TLVQIETQLEPPKVVAIQEG-QSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKF  120 (331)
T ss_dssp             EEEECSSSCEEEEEESTTC-EEEEEECSSSSCEEEEEEEC-SSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEE
T ss_pred             eEEEcCCCCEEEEEeCCCC-eEEEEECCCCceeEEecccC-CCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCe
Confidence            8899998888999999888 999999986654 3334333 56777 99999888899 54444 4  899999987655


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCc-EEEEeCCCCCcEE----EEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPK-IEWSNLDGTDREI----FLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~-I~~~~~~g~~~~~----~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ...+. ....|.+++++|.++.||+++..  ... |...+++......    ..... ...|.++++++++++||++...
T Consensus       121 ~~~~~-~~~~~~~~~~spdg~~l~~~~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~  196 (331)
T 3u4y_A          121 ISTIP-IPYDAVGIAISPNGNGLILIDRS--SANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLI  196 (331)
T ss_dssp             EEEEE-CCTTEEEEEECTTSSCEEEEEET--TTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETT
T ss_pred             EEEEE-CCCCccceEECCCCCEEEEEecC--CCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCC
Confidence            44444 34578999999977789999875  344 6655555432211    11122 4679999999998889999998


Q ss_pred             CCcEEEEecCCCce---EEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751         154 SKSLECMTIRNRVR---RKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERA  207 (232)
Q Consensus       154 ~~~i~~~~~~g~~~---~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~  207 (232)
                      .+.|..++++....   .........|.++++.  +.+||++....+.|..++..+...
T Consensus       197 ~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~  255 (331)
T 3u4y_A          197 GNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL  255 (331)
T ss_dssp             TTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred             CCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence            99999999986554   2223345678899985  557999988888899999875544

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.59  E-value=8.5e-12  Score=101.84  Aligned_cols=217  Identities=17%  Similarity=0.193  Sum_probs=163.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +.+++|++..+.||++...++ .|..+++........+... ..+.++++++.++.||++....+.|.+.++........
T Consensus        34 ~~~~~~s~dg~~l~~~~~~d~-~i~v~d~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~  111 (391)
T 1l0q_A           34 PMGAVISPDGTKVYVANAHSN-DVSIIDTATNNVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT  111 (391)
T ss_dssp             EEEEEECTTSSEEEEEEGGGT-EEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             cceEEECCCCCEEEEECCCCC-eEEEEECCCCeEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEE
Confidence            568999998889999987777 8999999766544444433 38899999998899999998889999999987665544


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      +. ....+.++++++.++.||++...  .+.|...++........+..  ...|.+++++++++.||++....+.|...+
T Consensus       112 ~~-~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d  186 (391)
T 1l0q_A          112 VK-TGKSPLGLALSPDGKKLYVTNNG--DKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVID  186 (391)
T ss_dssp             EE-CSSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             Ee-CCCCcceEEECCCCCEEEEEeCC--CCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence            44 34578999999977788888754  56799999876554444443  467899999999889999988889999999


Q ss_pred             cCCCceEEEecCCCceEEEEEE--CCEEEEEeC--CCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEEcCC
Q psy5751         162 IRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW--KTNRIESANKEGER-APSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       162 ~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~--~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ++.............+.++++.  +..||++..  ..+.|..++..... ...+.    ....|.++++.+++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg  255 (391)
T 1l0q_A          187 TVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP----VGPDPAGIAVTPDG  255 (391)
T ss_dssp             TTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE----CCSSEEEEEECTTS
T ss_pred             CCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe----cCCCccEEEEccCC
Confidence            9877655555555678888884  567888876  67889999987433 22222    13356777766543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.58  E-value=2.9e-12  Score=103.22  Aligned_cols=205  Identities=12%  Similarity=0.057  Sum_probs=137.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEE--eCC---------CCCccEEEEeecCCeEEEEeCCCCeEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVI--TTN---------IRSPEGLTFDWVNRVLYWTDSQMDTIS   69 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~--~~~---------~~~p~gl~~d~~~~~ly~~d~~~~~I~   69 (232)
                      |.++++++..+.||+++..++ .|..++++.. ....+.  ...         ...+.++++++.++ +|+++...+.|.
T Consensus        88 p~~~a~spdg~~l~~~~~~~~-~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~  165 (347)
T 3hfq_A           88 PAYVAVDEARQLVYSANYHKG-TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVY  165 (347)
T ss_dssp             CSEEEEETTTTEEEEEETTTT-EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred             CEEEEECCCCCEEEEEeCCCC-EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEE
Confidence            567899998889999998777 7888877522 222221  111         12477899999777 999999989999


Q ss_pred             EEeCCC-CCCEEEE--e-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEEE--EcCC-----CCCcc
Q psy5751          70 MANLND-DQPKVIV--S-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIFL--KAAD-----LKLPN  136 (232)
Q Consensus        70 ~~~~~g-~~~~~~~--~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~~--~~~~-----~~~p~  136 (232)
                      +++++. .....+.  . .....|.+++++|.++.||+++..  .+.|...+++.  .....+.  ....     ...|.
T Consensus       166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  243 (347)
T 3hfq_A          166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL--SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAA  243 (347)
T ss_dssp             EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEE
T ss_pred             EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC--CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcce
Confidence            998872 2222221  1 344579999999977779998865  34566666653  2222221  1110     13488


Q ss_pred             eEEEeCCCCEEEEEECCCCcEEEEecCCC-ceEEEe---cCCCceEEEEEE--CCEEEEEeCCCCcEEEE--eCCCCCcc
Q psy5751         137 SLAVDFRTDELCWVDADSKSLECMTIRNR-VRRKVY---SNCTYPFGLSIT--DEKYYWTDWKTNRIESA--NKEGERAP  208 (232)
Q Consensus       137 ~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~-~~~~~~---~~~~~p~gla~~--~~~ly~td~~~~~i~~~--~~~g~~~~  208 (232)
                      ++++++++++||+++...+.|..++++.. ..+.+.   .....|.++++.  +.+||+++..++.|..+  +..+...+
T Consensus       244 ~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          244 AIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             EEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             eEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence            89999998899999988888888887622 222222   235568999995  55899999988877777  44444444


Q ss_pred             eE
Q psy5751         209 SI  210 (232)
Q Consensus       209 ~i  210 (232)
                      .+
T Consensus       324 ~~  325 (347)
T 3hfq_A          324 LL  325 (347)
T ss_dssp             EE
T ss_pred             ec
Confidence            33

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.57  E-value=2.6e-12  Score=102.88  Aligned_cols=188  Identities=17%  Similarity=0.174  Sum_probs=137.1

Q ss_pred             EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCC--CCCcEEEE
Q psy5751          39 ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNR--SGPKIEWS  116 (232)
Q Consensus        39 ~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~--~~~~I~~~  116 (232)
                      +......|.++++|+ .+.|||++...+.|++++.++.....+.......|.++++++ ++.||++....  ....|+++
T Consensus        40 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~  117 (333)
T 2dg1_A           40 ISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAA  117 (333)
T ss_dssp             EESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEE
T ss_pred             EeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEE
Confidence            344567889999997 566999998889999999987766555543456799999997 67899987542  12579999


Q ss_pred             eCCCCCcEEEEEc-CCCCCcceEEEeCCCCEEEEEECC------CCcEEEEecCCCceEEEecCCCceEEEEEE-C-CEE
Q psy5751         117 NLDGTDREIFLKA-ADLKLPNSLAVDFRTDELCWVDAD------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT-D-EKY  187 (232)
Q Consensus       117 ~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~-~~l  187 (232)
                      +.++.....++.. .....|+++++|++ +++|+++..      .+.|++++.++...+.+......|.++++. + ..|
T Consensus       118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l  196 (333)
T 2dg1_A          118 TENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVL  196 (333)
T ss_dssp             CTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred             eCCCCEEEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEE
Confidence            9988876644431 12457899999997 789999875      468999998876666665566679999996 3 479


Q ss_pred             EEEeCCCCcEEEEeCC--CCCcceEE----eccCCcceeEEEEEEcCC
Q psy5751         188 YWTDWKTNRIESANKE--GERAPSIA----LDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       188 y~td~~~~~i~~~~~~--g~~~~~i~----~~~~~~~~p~gi~~~~~~  229 (232)
                      |+++...+.|.+++..  |...+.+.    ....+...|.+|++..++
T Consensus       197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G  244 (333)
T 2dg1_A          197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD  244 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred             EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC
Confidence            9999888899999984  44333221    111123478999887654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.57  E-value=3.4e-12  Score=102.79  Aligned_cols=223  Identities=10%  Similarity=0.045  Sum_probs=146.3

Q ss_pred             eEEEEEeCCCCEEEEEEcC--CCCcEEEEEcCCCceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVA--DKSSIKRAHLDGKNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~--~~~~i~~~~~~g~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      |.+++|++ +++||+++..  ++ .|+.+++++...+.+.  ......|.++++++.++.||+++...+.|.+++++...
T Consensus        42 p~~~a~sp-dg~l~~~~~~~~~~-~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g  119 (347)
T 3hfq_A           42 PTYLALSA-KDCLYSVDKEDDEG-GIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG  119 (347)
T ss_dssp             CCCEEECT-TCEEEEEEEETTEE-EEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS
T ss_pred             cceEEEcc-CCeEEEEEecCCCc-eEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC
Confidence            56789998 4559998864  34 7999888765533332  22346899999999889999999888888888875332


Q ss_pred             C-EEEE--eCC---------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CCCcEEEE--EcCCCCCcceEEEeC
Q psy5751          78 P-KVIV--SKD---------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GTDREIFL--KAADLKLPNSLAVDF  142 (232)
Q Consensus        78 ~-~~~~--~~~---------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~~~~~~~--~~~~~~~p~~l~~d~  142 (232)
                      . ..+.  ...         ...|.+++++|.++ ||+++..  ..+|...+++ ......+.  .......|.++++++
T Consensus       120 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~--~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp  196 (347)
T 3hfq_A          120 ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG--SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP  196 (347)
T ss_dssp             CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT
T ss_pred             CeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC
Confidence            2 2221  111         23477899999545 9999876  4567777776 22222221  111144789999999


Q ss_pred             CCCEEEEEECCCCcEEEEecCC--CceEEEe--cC-------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcc
Q psy5751         143 RTDELCWVDADSKSLECMTIRN--RVRRKVY--SN-------CTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAP  208 (232)
Q Consensus       143 ~~~~Ly~~d~~~~~i~~~~~~g--~~~~~~~--~~-------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~  208 (232)
                      ++++||+++...+.|..++++.  +..+.+.  ..       ...|.++++.  +.+||+++...+.|..++.+ ....+
T Consensus       197 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~  276 (347)
T 3hfq_A          197 DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLT  276 (347)
T ss_dssp             TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEE
T ss_pred             CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEE
Confidence            9888999999888888887774  3322221  11       1458889985  45799999888888888765 22333


Q ss_pred             eEEeccCCcceeEEEEEEcCC
Q psy5751         209 SIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       209 ~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      .+.........|.++++-+++
T Consensus       277 ~~~~~~~~~~~~~~~~~spdg  297 (347)
T 3hfq_A          277 LIQQISTEGDFPRDFDLDPTE  297 (347)
T ss_dssp             EEEEEECSSSCCCEEEECTTS
T ss_pred             EeEEEecCCCCcCeEEECCCC
Confidence            332222223357888876654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=99.57  E-value=9.3e-13  Score=107.08  Aligned_cols=198  Identities=12%  Similarity=0.171  Sum_probs=136.0

Q ss_pred             eEEEEEeCC---CCEEEEEEcC-------CCCcEEEEEcCCC-----ceeEEEeC------CCCCccEEEEeecCCeEEE
Q psy5751           2 LIGITVDCV---EGQVYYSSVA-------DKSSIKRAHLDGK-----NVEDVITT------NIRSPEGLTFDWVNRVLYW   60 (232)
Q Consensus         2 ~~~i~~d~~---~~~ly~~d~~-------~~~~i~~~~~~g~-----~~~~~~~~------~~~~p~gl~~d~~~~~ly~   60 (232)
                      +.+|++++.   ++.||+++..       .. +|.++.+++.     ..+.++..      ....+.+|++++ .+.||+
T Consensus        68 ~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~-~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv  145 (353)
T 2g8s_A           68 LLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT-AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFI  145 (353)
T ss_dssp             EEEEEECTTHHHHCEEEEEEEEECSSSCEEE-EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEE
T ss_pred             ceeEEECCCCCCCCEEEEEEeCCCCCCCcee-EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEE
Confidence            468999986   8999999764       34 7999988753     23333321      224578999999 569999


Q ss_pred             EeCC-------------CCeEEEEeCCCC-------------CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcE
Q psy5751          61 TDSQ-------------MDTISMANLNDD-------------QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKI  113 (232)
Q Consensus        61 ~d~~-------------~~~I~~~~~~g~-------------~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I  113 (232)
                      +...             .++|++++.+|.             ..++. ...+.+|.++++|+.++.||+++.+.. ...|
T Consensus       146 ~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~-a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei  224 (353)
T 2g8s_A          146 ALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIW-SYGIRNPQGMAMNPWSNALWLNEHGPRGGDEI  224 (353)
T ss_dssp             EECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEE-EECCSEEEEEEEETTTTEEEEEEECSBSCEEE
T ss_pred             EECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEE-EEcCcCccceEEECCCCCEEEEecCCCCCcEE
Confidence            9633             368999999987             23333 347788999999998899999997642 1123


Q ss_pred             EEEeCCCC--------------------------C-cEEEEEcCCCCCcceEEEeCC------CCEEEEEECCCCcEEEE
Q psy5751         114 EWSNLDGT--------------------------D-REIFLKAADLKLPNSLAVDFR------TDELCWVDADSKSLECM  160 (232)
Q Consensus       114 ~~~~~~g~--------------------------~-~~~~~~~~~~~~p~~l~~d~~------~~~Ly~~d~~~~~i~~~  160 (232)
                      .++...+.                          . ...+..-.....|.|+++...      .+.||+++...++|+++
T Consensus       225 ~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~  304 (353)
T 2g8s_A          225 NIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVM  304 (353)
T ss_dssp             ECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEE
T ss_pred             eEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEE
Confidence            33221100                          0 000010011347899999863      38999999999999999


Q ss_pred             ecCCCce---EEEec-CCCceEEEEEE-CCEEEEE-eCCCCcEEEEeC
Q psy5751         161 TIRNRVR---RKVYS-NCTYPFGLSIT-DEKYYWT-DWKTNRIESANK  202 (232)
Q Consensus       161 ~~~g~~~---~~~~~-~~~~p~gla~~-~~~ly~t-d~~~~~i~~~~~  202 (232)
                      ++++...   ..++. ....|.++++. ++.||++ +..+++|+|+.+
T Consensus       305 ~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~  352 (353)
T 2g8s_A          305 SVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP  352 (353)
T ss_dssp             EEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred             EeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence            9986532   22332 35689999996 7789996 767889999875

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.55  E-value=5.6e-12  Score=97.95  Aligned_cols=177  Identities=14%  Similarity=0.082  Sum_probs=127.1

Q ss_pred             CCccEEEEeecCCeEEEEeC--CCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDS--QMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG  120 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g  120 (232)
                      ..|.||++++. +.||++..  ..+.|.++|+........+. .....+.|++++  +++||++.+.  .+++.+++.+.
T Consensus        21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~--~~~v~viD~~t   95 (266)
T 2iwa_A           21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL--KNIGFIYDRRT   95 (266)
T ss_dssp             CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT--CSEEEEEETTT
T ss_pred             CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec--CCEEEEEECCC
Confidence            35789999974 79999974  46799999998766443333 333455677887  7899999986  57799998874


Q ss_pred             CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEEe-c----CCCceEEEEEECCEEEEEeCCC
Q psy5751         121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKVY-S----NCTYPFGLSITDEKYYWTDWKT  194 (232)
Q Consensus       121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~-~----~~~~p~gla~~~~~ly~td~~~  194 (232)
                      .....-+..  - .|.|..+.+++++||+++ +.++|..+|+.+.+. ..+. .    -...|+++++.++.||++.|.+
T Consensus        96 ~~v~~~i~~--g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~  171 (266)
T 2iwa_A           96 LSNIKNFTH--Q-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT  171 (266)
T ss_dssp             TEEEEEEEC--C-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTS
T ss_pred             CcEEEEEEC--C-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCC
Confidence            432222222  1 356666666779999998 688999999987654 3332 1    1235789998888999999999


Q ss_pred             CcEEEEeCC-CCCcceEEeccCC----------cceeEEEEEEcCC
Q psy5751         195 NRIESANKE-GERAPSIALDMMG----------TTYMYGIAAVPSS  229 (232)
Q Consensus       195 ~~i~~~~~~-g~~~~~i~~~~~~----------~~~p~gi~~~~~~  229 (232)
                      +.|.++++. |+....+.+....          ...|.|||+.++.
T Consensus       172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~  217 (266)
T 2iwa_A          172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN  217 (266)
T ss_dssp             SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred             CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence            999999997 5566677664211          1378999998763

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=99.53  E-value=2.3e-12  Score=103.83  Aligned_cols=164  Identities=12%  Similarity=0.060  Sum_probs=123.8

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe------CCCCCceEEEEeCC---CCeEEEEEcC
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS------KDLVNPRGIVVHPY---YRKLFWSDWN  107 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------~~~~~p~~iavd~~---~~~ly~~d~~  107 (232)
                      +++..++..|.+|++.+ .+.||+++...++|++++.++.....+..      .....+.|||++|.   ++.||++...
T Consensus        25 ~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~  103 (347)
T 3das_A           25 RTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS  103 (347)
T ss_dssp             EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred             EEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence            56677899999999998 46799999878999999876544333321      24567899999984   7999998654


Q ss_pred             CCCCcEEEEeCCCC--------CcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-------------CCCcEEEEecC
Q psy5751         108 RSGPKIEWSNLDGT--------DREIFLKAA---DLKLPNSLAVDFRTDELCWVDA-------------DSKSLECMTIR  163 (232)
Q Consensus       108 ~~~~~I~~~~~~g~--------~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~-------------~~~~i~~~~~~  163 (232)
                      ....+|.|+.+++.        ..++++...   ..+....|+++++ ++||++..             ..++|+|++++
T Consensus       104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d  182 (347)
T 3das_A          104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTGESGDTGLSQDRKSLGGKILRMTPD  182 (347)
T ss_dssp             SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred             CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence            44678999988762        244554321   2456778999997 79999942             35899999999


Q ss_pred             CC--------ceEEEecCCCceEEEEEE-CCEEEEEeCCCC---cEEEEeC
Q psy5751         164 NR--------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTN---RIESANK  202 (232)
Q Consensus       164 g~--------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~---~i~~~~~  202 (232)
                      |+        ..+++...+..|.|++++ .+.||++|.+..   +|.++.+
T Consensus       183 G~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~  233 (347)
T 3das_A          183 GEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKP  233 (347)
T ss_dssp             SSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECT
T ss_pred             CCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcC
Confidence            87        566778899999999997 789999998763   4555543

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.53  E-value=8e-11  Score=95.30  Aligned_cols=219  Identities=12%  Similarity=0.037  Sum_probs=143.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-e---eEEEe-CC---------CCCccEEEEeecCCeEEEEeCCCCe
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-V---EDVIT-TN---------IRSPEGLTFDWVNRVLYWTDSQMDT   67 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~---~~~~~-~~---------~~~p~gl~~d~~~~~ly~~d~~~~~   67 (232)
                      |..+++  ..+.||+++..++ .|..++++... .   ..... .+         ...+.++++++.++.||+++...+.
T Consensus       102 p~~~~~--dg~~l~~~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  178 (361)
T 3scy_A          102 PCYLTT--NGKNIVTANYSGG-SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ  178 (361)
T ss_dssp             EEEEEE--CSSEEEEEETTTT-EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred             cEEEEE--CCCEEEEEECCCC-EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence            566777  5788999998877 88888886322 1   11111 11         2345789999988889999998888


Q ss_pred             EEEEeCCCCCC-------------EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc----C
Q psy5751          68 ISMANLNDDQP-------------KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA----A  130 (232)
Q Consensus        68 I~~~~~~g~~~-------------~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~----~  130 (232)
                      |.+++++....             ..........|++++++|.++.||++...  .+.|...+++......+...    .
T Consensus       179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~--~~~v~v~~~~~g~~~~~~~~~~~~~  256 (361)
T 3scy_A          179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI--GGTVIAFRYADGMLDEIQTVAADTV  256 (361)
T ss_dssp             EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT--TCEEEEEEEETTEEEEEEEEESCSS
T ss_pred             EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC--CCeEEEEEecCCceEEeEEEecCCC
Confidence            98887765431             12222456689999999977789998854  45687777764433322211    1


Q ss_pred             CCCCcceEEEeCCCCEEEEEECC-CCcEEEEecC--CCceEEEe--cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         131 DLKLPNSLAVDFRTDELCWVDAD-SKSLECMTIR--NRVRRKVY--SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       131 ~~~~p~~l~~d~~~~~Ly~~d~~-~~~i~~~~~~--g~~~~~~~--~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      ....|.++++++++++||+++.. .+.|..++++  ++..+.+.  .....|.++++.  +.+||+++..++.|..+..+
T Consensus       257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d  336 (361)
T 3scy_A          257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD  336 (361)
T ss_dssp             CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred             CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence            13457899999998999999988 7777777765  33333332  234578999995  55799999888888775444


Q ss_pred             --CCCcceEEeccCCcceeEEEEEE
Q psy5751         204 --GERAPSIALDMMGTTYMYGIAAV  226 (232)
Q Consensus       204 --g~~~~~i~~~~~~~~~p~gi~~~  226 (232)
                        +...+.+.. ......|..|++.
T Consensus       337 ~~~g~~~~~~~-~~~~~~p~~v~~~  360 (361)
T 3scy_A          337 QATGLLTDIKK-DIKVDKPVCLKFV  360 (361)
T ss_dssp             TTTCCEEECSC-CEECSSEEEEEEE
T ss_pred             CCCCcEeecce-eeeCCCCeEEEEc
Confidence              333332211 1223456666654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.53  E-value=1.5e-11  Score=98.22  Aligned_cols=223  Identities=16%  Similarity=0.142  Sum_probs=150.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~   78 (232)
                      |.+++|++..+.||+++..++ .|..++++ +...+.+ .......+.++++++.++.||+++...+.|.+++++. ...
T Consensus        86 ~~~~~~s~dg~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~  164 (343)
T 1ri6_A           86 LTHISTDHQGQFVFVGSYNAG-NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL  164 (343)
T ss_dssp             CSEEEECTTSSEEEEEETTTT-EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred             CcEEEEcCCCCEEEEEecCCC-eEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence            457899998889999998777 78888874 2211111 1233457999999998889999997778999999876 332


Q ss_pred             EE----EEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEE--EEc-C----CCCCcceEEEeCCC
Q psy5751          79 KV----IVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIF--LKA-A----DLKLPNSLAVDFRT  144 (232)
Q Consensus        79 ~~----~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~--~~~-~----~~~~p~~l~~d~~~  144 (232)
                      ..    ... .....|.+++++|.++.||++...  .+.|...+++.  ......  ... .    ....|.++++++++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg  242 (343)
T 1ri6_A          165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG  242 (343)
T ss_dssp             EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred             eeecccccccCCCCCcceEEECCCCCEEEEEeCC--CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC
Confidence            22    122 334588999999977789998854  45688888754  222211  111 1    02346689999998


Q ss_pred             CEEEEEECCCCcEEEEecC--CCceEEE--ecCCCceEEEEEE--CCEEEEEeCCCCcEEEE--eCCCCCcceEEeccCC
Q psy5751         145 DELCWVDADSKSLECMTIR--NRVRRKV--YSNCTYPFGLSIT--DEKYYWTDWKTNRIESA--NKEGERAPSIALDMMG  216 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~--g~~~~~~--~~~~~~p~gla~~--~~~ly~td~~~~~i~~~--~~~g~~~~~i~~~~~~  216 (232)
                      +.||++....+.|..++++  ++..+.+  ......|.++++.  +.+||++....+.|..+  +..+...+.+..-. .
T Consensus       243 ~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~-~  321 (343)
T 1ri6_A          243 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYA-V  321 (343)
T ss_dssp             SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEE-C
T ss_pred             CEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccc-c
Confidence            8999999888888888887  4433333  2233348899985  56799998777777766  54444444333211 1


Q ss_pred             cceeEEEEEEcC
Q psy5751         217 TTYMYGIAAVPS  228 (232)
Q Consensus       217 ~~~p~gi~~~~~  228 (232)
                      ...|.+|++.++
T Consensus       322 g~~p~~i~~~~~  333 (343)
T 1ri6_A          322 GQGPMWVVVNAH  333 (343)
T ss_dssp             SSSCCEEEEEEE
T ss_pred             CCCCeeEEEEcc
Confidence            357899988754

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.52  E-value=9e-11  Score=94.99  Aligned_cols=222  Identities=9%  Similarity=0.053  Sum_probs=144.4

Q ss_pred             eEEEEEeCCCCEEEEEEcC---CCCcEEEEEcCC--CceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751           2 LIGITVDCVEGQVYYSSVA---DKSSIKRAHLDG--KNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN   74 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~---~~~~i~~~~~~g--~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~   74 (232)
                      |..+++++..+.||.++..   .+ .|..+.++.  ...+.+.  ......|..+++  .++.||+++...+.|.+++++
T Consensus        52 p~~l~~spdg~~l~~~~~~~~~~~-~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~  128 (361)
T 3scy_A           52 PSYLIPSADGKFVYSVNEFSKDQA-AVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIG  128 (361)
T ss_dssp             CCSEEECTTSSEEEEEECCSSTTC-EEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBC
T ss_pred             CceEEECCCCCEEEEEEccCCCCC-cEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeC
Confidence            5568999988899999874   34 665555443  3333332  223457888988  478899999888899999876


Q ss_pred             CCC----CEEEEe--CC--------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-------cE-----EEEE
Q psy5751          75 DDQ----PKVIVS--KD--------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-------RE-----IFLK  128 (232)
Q Consensus        75 g~~----~~~~~~--~~--------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-------~~-----~~~~  128 (232)
                      ...    ......  ..        ..+|.+++++|.+++||+++..  ...|...+++...       ..     ....
T Consensus       129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~  206 (361)
T 3scy_A          129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG--TDQIHKFNINPNANADNKEKFLTKGTPEAFK  206 (361)
T ss_dssp             TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred             CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC--CCEEEEEEEcCCCCcccccceeeccccccee
Confidence            432    111111  11        2345789999977789999875  3456666655332       21     1122


Q ss_pred             cCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec------CCCceEEEEEE--CCEEEEEeCC-CCcEEE
Q psy5751         129 AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS------NCTYPFGLSIT--DEKYYWTDWK-TNRIES  199 (232)
Q Consensus       129 ~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~------~~~~p~gla~~--~~~ly~td~~-~~~i~~  199 (232)
                      ......|.++++++++.+||+++...+.|..++++++..+.+..      ....|.++++.  +.+||+++.. .+.|..
T Consensus       207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v  286 (361)
T 3scy_A          207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAI  286 (361)
T ss_dssp             CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred             cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence            22256799999999988999999888899999887654433321      23557899984  5679999987 777777


Q ss_pred             EeCC--CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         200 ANKE--GERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       200 ~~~~--g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ++.+  +...+.+..... ...|.++++-+++
T Consensus       287 ~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg  317 (361)
T 3scy_A          287 FKVDETNGTLTKVGYQLT-GIHPRNFIITPNG  317 (361)
T ss_dssp             EEECTTTCCEEEEEEEEC-SSCCCEEEECTTS
T ss_pred             EEEcCCCCcEEEeeEecC-CCCCceEEECCCC
Confidence            6654  334333322111 3467788776654

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.52  E-value=1.4e-11  Score=98.29  Aligned_cols=224  Identities=11%  Similarity=0.072  Sum_probs=150.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-CCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-DDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-g~~   77 (232)
                      |.+++|++..+.||+++..++ .|..++++  +...+.+.. .....|.++++++.++.||++....+.|.+++++ |..
T Consensus        40 ~~~~~~spdg~~l~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~  118 (343)
T 1ri6_A           40 VQPMVVSPDKRYLYVGVRPEF-RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP  118 (343)
T ss_dssp             CCCEEECTTSSEEEEEETTTT-EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred             CceEEECCCCCEEEEeecCCC-eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc
Confidence            457899998889999998766 78887776  444322211 1124899999999888899999888889988874 221


Q ss_pred             CEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC-CCcEEE----EEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751          78 PKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG-TDREIF----LKAADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        78 ~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g-~~~~~~----~~~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      ...+.. .....|.+++++|.++.||+++..  .++|...+++. ......    ........|.++++++++.+||++.
T Consensus       119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~  196 (343)
T 1ri6_A          119 VGVVDVVEGLDGCHSANISPDNRTLWVPALK--QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN  196 (343)
T ss_dssp             EEEEEEECCCTTBCCCEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred             ccccccccCCCCceEEEECCCCCEEEEecCC--CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence            122211 345679999999977789998844  35688888765 333221    1221145789999999988899999


Q ss_pred             CCCCcEEEEecCC--CceE---EEec------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC--CCCcceEEeccCC
Q psy5751         152 ADSKSLECMTIRN--RVRR---KVYS------NCTYPFGLSIT--DEKYYWTDWKTNRIESANKE--GERAPSIALDMMG  216 (232)
Q Consensus       152 ~~~~~i~~~~~~g--~~~~---~~~~------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~--g~~~~~i~~~~~~  216 (232)
                      ...+.|..++++.  +..+   .+..      ....|.++++.  +..||++....+.|..++..  +...+.+.....+
T Consensus       197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~  276 (343)
T 1ri6_A          197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE  276 (343)
T ss_dssp             TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS
T ss_pred             CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC
Confidence            8889999999863  2222   1211      12356678885  55899999888888888877  4444433322212


Q ss_pred             cceeEEEEEEcCC
Q psy5751         217 TTYMYGIAAVPSS  229 (232)
Q Consensus       217 ~~~p~gi~~~~~~  229 (232)
                       ..|.++++.+++
T Consensus       277 -~~~~~~~~s~dg  288 (343)
T 1ri6_A          277 -TQPRGFNVDHSG  288 (343)
T ss_dssp             -SSCCCEEECTTS
T ss_pred             -CccceEEECCCC
Confidence             237777776543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.52  E-value=7.6e-11  Score=96.16  Aligned_cols=196  Identities=19%  Similarity=0.183  Sum_probs=153.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +.+++|++.++.||++...++ .|..+++........+.. -..+.++++.+.++.||++....+.|.+.++........
T Consensus        76 v~~~~~spdg~~l~~~~~~~~-~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~  153 (391)
T 1l0q_A           76 PQGVAVSPDGKQVYVTNMASS-TLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT  153 (391)
T ss_dssp             EEEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             ccceEECCCCCEEEEEECCCC-EEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence            568999998899999988777 899999987665444443 357899999998888999998889999999877655444


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLEC  159 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~~  159 (232)
                      +. ....|.+++++|.++.||++...  .+.|...++........+..  ...+.++++++++.+||++..  ..+.|..
T Consensus       154 ~~-~~~~~~~~~~~~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~  228 (391)
T 1l0q_A          154 VS-VGRSPKGIAVTPDGTKVYVANFD--SMSISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSM  228 (391)
T ss_dssp             EE-CCSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEE
T ss_pred             Ee-cCCCcceEEECCCCCEEEEEeCC--CCEEEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEE
Confidence            44 34578999999977788888754  46799999876654444433  457899999999889999976  6789999


Q ss_pred             EecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751         160 MTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       160 ~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +++...+..........|.++++.  +..||++....+.|..++...
T Consensus       229 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~  275 (391)
T 1l0q_A          229 IDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT  275 (391)
T ss_dssp             EETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             EECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence            999876554444445568888885  558999988889999999874

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=99.46  E-value=2.1e-11  Score=98.59  Aligned_cols=183  Identities=14%  Similarity=0.084  Sum_probs=126.0

Q ss_pred             CCCccEEEEeecCCeEEEEe------------CCCCeEEEEeCCCC--CCEEEEeCC------CCCceEEEEeCC---CC
Q psy5751          43 IRSPEGLTFDWVNRVLYWTD------------SQMDTISMANLNDD--QPKVIVSKD------LVNPRGIVVHPY---YR   99 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d------------~~~~~I~~~~~~g~--~~~~~~~~~------~~~p~~iavd~~---~~   99 (232)
                      ...|++|++++ .+.+|.+.            ...++|++++++..  ..+.+.-..      .-+|.||.+.+.   +.
T Consensus        49 ~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~  127 (355)
T 3sre_A           49 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTV  127 (355)
T ss_dssp             CSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred             CCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence            36899999998 78999886            25789999999843  222222222      248999999652   34


Q ss_pred             eEEEEEcCCCCCcEEE--EeCCCCCcEEEEE--cCCCCCcceEEEeCCCCEEEEEEC-----------------CCCcEE
Q psy5751         100 KLFWSDWNRSGPKIEW--SNLDGTDREIFLK--AADLKLPNSLAVDFRTDELCWVDA-----------------DSKSLE  158 (232)
Q Consensus       100 ~ly~~d~~~~~~~I~~--~~~~g~~~~~~~~--~~~~~~p~~l~~d~~~~~Ly~~d~-----------------~~~~i~  158 (232)
                      +||+++......+|..  .+.++.....+-.  ...+..||+++++++ +.+|+++.                 ..++|+
T Consensus       128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy  206 (355)
T 3sre_A          128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVT  206 (355)
T ss_dssp             EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred             EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEE
Confidence            7999987644455555  4454443322221  224788999999997 88888865                 246799


Q ss_pred             EEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEc-CCC
Q psy5751         159 CMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVP-SSC  230 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~-~~~  230 (232)
                      +++..  ..+.+.+.+..|+||++.  +..||++|...++|++++.++ ......+.- ..+..|.|+++.. +++
T Consensus       207 r~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~  279 (355)
T 3sre_A          207 YYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGD  279 (355)
T ss_dssp             EECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCC
T ss_pred             EEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCc
Confidence            98773  566778899999999995  569999999999999999763 222211111 2257899999998 354

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.46  E-value=1.5e-10  Score=95.68  Aligned_cols=217  Identities=10%  Similarity=0.146  Sum_probs=157.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++++++ ++.+|++...++ .|..++++.......+......+.++++++.++.+|++....+.|.+.++........+
T Consensus       173 ~~~~~~~-~~~~~~s~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~  250 (433)
T 3bws_A          173 ETISIPE-HNELWVSQMQAN-AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT  250 (433)
T ss_dssp             EEEEEGG-GTEEEEEEGGGT-EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred             eEEEEcC-CCEEEEEECCCC-EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence            4577755 788888888777 89999998755444444445688999999988999999988889999998765433333


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCC-----CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNR-----SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~-----~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                      . ....|.+++++|.++.||.+....     ..+.|+..++...........  ...|.+++++++++.||++....+.|
T Consensus       251 ~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~v  327 (433)
T 3bws_A          251 D-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCCSKI  327 (433)
T ss_dssp             C-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTTTEE
T ss_pred             c-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCCCEE
Confidence            3 345689999999777888877532     145788898876544333322  23788999999988999999999999


Q ss_pred             EEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCC--------------CcEEEEeCCCCC-cceEEeccCCccee
Q psy5751         158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKT--------------NRIESANKEGER-APSIALDMMGTTYM  220 (232)
Q Consensus       158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~--------------~~i~~~~~~g~~-~~~i~~~~~~~~~p  220 (232)
                      ...++++.+..........|.++++.  +..||++....              +.|..++..... ...+.    ....|
T Consensus       328 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----~~~~~  403 (433)
T 3bws_A          328 EVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----AGNQP  403 (433)
T ss_dssp             EEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----CSSSE
T ss_pred             EEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----CCCCC
Confidence            99999976655445556678899985  45788887754              488889876433 33332    23467


Q ss_pred             EEEEEEcC
Q psy5751         221 YGIAAVPS  228 (232)
Q Consensus       221 ~gi~~~~~  228 (232)
                      .++++.++
T Consensus       404 ~~~~~s~d  411 (433)
T 3bws_A          404 TGLDVSPD  411 (433)
T ss_dssp             EEEEECTT
T ss_pred             ceEEEcCC
Confidence            77777654

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.43  E-value=5.2e-10  Score=91.51  Aligned_cols=213  Identities=10%  Similarity=-0.012  Sum_probs=132.1

Q ss_pred             EEEEeCCCCEEEEEEcC---------CCCcEEEEEcCCCceeEEEeCC-------CCCccEEEEeecCCeEEEEeCC-CC
Q psy5751           4 GITVDCVEGQVYYSSVA---------DKSSIKRAHLDGKNVEDVITTN-------IRSPEGLTFDWVNRVLYWTDSQ-MD   66 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~---------~~~~i~~~~~~g~~~~~~~~~~-------~~~p~gl~~d~~~~~ly~~d~~-~~   66 (232)
                      ++.+++..++||+++..         ++ .|.+++.........+...       ...|.++++++.++.||+++.. .+
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~-~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~  148 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTD-YVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP  148 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCC-eEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCC
Confidence            78999999999999852         34 6888888754432222211       2468999999999999999865 67


Q ss_pred             eEEEEeCCCCCCEEE-EeCCCCCceEEEE------------------------------------------------eCC
Q psy5751          67 TISMANLNDDQPKVI-VSKDLVNPRGIVV------------------------------------------------HPY   97 (232)
Q Consensus        67 ~I~~~~~~g~~~~~~-~~~~~~~p~~iav------------------------------------------------d~~   97 (232)
                      .|.++| +....... +.  .  |..+.+                                                .+.
T Consensus       149 ~v~viD-~t~~~~~~~i~--~--~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~  223 (373)
T 2mad_H          149 AVGLVV-QGGSSDDQLLS--S--PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK  223 (373)
T ss_pred             eEEEEE-CCCCEEeEEcC--C--CceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEec
Confidence            899999 66543222 21  1  111111                                                111


Q ss_pred             CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEECC---------CCcE
Q psy5751          98 YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDAD---------SKSL  157 (232)
Q Consensus        98 ~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~~---------~~~i  157 (232)
                      .+.+||...   .++++.+++.+....++..-.        ....|.+   +++++++++||++...         .+.|
T Consensus       224 ~~~~~~~~~---~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V  300 (373)
T 2mad_H          224 SGRIVWPVY---SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV  300 (373)
T ss_pred             CCEEEEEcC---CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE
Confidence            222333221   224555555443322211100        0123666   8999999999998642         4579


Q ss_pred             EEEecCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751         158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +.+|....+...-......|.++++.  +. .+|++++.++.|..++..+ +..+.+.  .-+ ..|++|.+.+.
T Consensus       301 ~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~--~vG-~~P~~~~~~~~  372 (373)
T 2mad_H          301 TSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV--ELG-SGPQVLSVMNE  372 (373)
T ss_pred             EEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeec--CCC-CCCcEEEEccc
Confidence            99999876653333444579999994  45 6888888899999999874 3333321  122 36888887653

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=99.43  E-value=4.4e-11  Score=100.27  Aligned_cols=148  Identities=18%  Similarity=0.223  Sum_probs=107.2

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe--C------CCCCccEEEEeec---CCeEEEEeCC-----
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT--T------NIRSPEGLTFDWV---NRVLYWTDSQ-----   64 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~--~------~~~~p~gl~~d~~---~~~ly~~d~~-----   64 (232)
                      .|.+|++++ +++||+++.... +|+++...+....++..  .      ....+.||++++.   ++.||+++..     
T Consensus        28 ~P~~~a~~p-dG~l~V~e~~gg-~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~  105 (454)
T 1cru_A           28 KPHALLWGP-DNQIWLTERATG-KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (454)
T ss_dssp             SEEEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CceEEEEcC-CCcEEEEEcCCC-EEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence            478999998 678999998776 89999875333333321  1      1235569999986   8999999853     


Q ss_pred             -------CCeEEEEeCCCCC-----CEEEEe----CCCCCceEEEEeCCCCeEEEEEcCC--------------------
Q psy5751          65 -------MDTISMANLNDDQ-----PKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR--------------------  108 (232)
Q Consensus        65 -------~~~I~~~~~~g~~-----~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~--------------------  108 (232)
                             ..+|.+.+++...     .++++.    .....+.+|++++ +|.||++....                    
T Consensus       106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~  184 (454)
T 1cru_A          106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQ  184 (454)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCH
T ss_pred             CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcccccccccccccccc
Confidence                   3589988875432     344443    2345689999998 78999995431                    


Q ss_pred             ----------CCCcEEEEeCCCC-----------CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751         109 ----------SGPKIEWSNLDGT-----------DREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus       109 ----------~~~~I~~~~~~g~-----------~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                                ..++|.|++.+|+           ..++....  +.+|.||++|+ .+.||++|.+.
T Consensus       185 ~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G--~RNp~gla~dp-~G~L~~~d~g~  248 (454)
T 1cru_A          185 QELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG--HRNPQGLAFTP-NGKLLQSEQGP  248 (454)
T ss_dssp             HHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC--CSEEEEEEECT-TSCEEEEEECS
T ss_pred             ccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC--CCCcceEEECC-CCCEEEEecCC
Confidence                      1478999999987           33444443  88999999999 59999998753

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=99.43  E-value=2.1e-10  Score=88.53  Aligned_cols=183  Identities=14%  Similarity=0.090  Sum_probs=132.0

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR  123 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~  123 (232)
                      ..+.||++|+.++.||.+....++|+.++++|...+.+.-....++.||+++. ++.+++++-.  .++++.+.++....
T Consensus        27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~--~~~l~~~~v~~~~~  103 (255)
T 3qqz_A           27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDER--DYAIYVISLTPNSE  103 (255)
T ss_dssp             SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETT--TTEEEEEEECTTCC
T ss_pred             cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECC--CCcEEEEEcCCCCe
Confidence            68999999998899998666688999999997765555435667999999996 6777777644  46788777655442


Q ss_pred             -EEEEEcC-CC-CCc-----ceEEEeCCCCEEEEEECCCC-cEEEEe--cCCCceEEEec-------CCCceEEEEEE--
Q psy5751         124 -EIFLKAA-DL-KLP-----NSLAVDFRTDELCWVDADSK-SLECMT--IRNRVRRKVYS-------NCTYPFGLSIT--  183 (232)
Q Consensus       124 -~~~~~~~-~~-~~p-----~~l~~d~~~~~Ly~~d~~~~-~i~~~~--~~g~~~~~~~~-------~~~~p~gla~~--  183 (232)
                       ..+-... .+ ..|     .||++|+.+++||.+..... .|+.++  +.+...+.+..       .+..+.+++++  
T Consensus       104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~  183 (255)
T 3qqz_A          104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ  183 (255)
T ss_dssp             EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred             eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence             2111111 02 234     79999999899999987665 788876  12222233211       34567899997  


Q ss_pred             CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCC------cceeEEEEEEcCC
Q psy5751         184 DEKYYWTDWKTNRIESANKEGERAPSIALDMMG------TTYMYGIAAVPSS  229 (232)
Q Consensus       184 ~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~------~~~p~gi~~~~~~  229 (232)
                      .++||+....++.+..++.+|.....+.+....      ...|-|||+.+++
T Consensus       184 tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G  235 (255)
T 3qqz_A          184 KNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG  235 (255)
T ss_dssp             TTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred             CCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence            689999999999999999999977766665321      3589999998865

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.42  E-value=1.1e-09  Score=84.31  Aligned_cols=188  Identities=12%  Similarity=0.045  Sum_probs=130.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|+.|+  ++.||.+.-..+ ++|.+++++.......+. ..-....|++++  ++.||.+....+.++++|.+......
T Consensus        46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~  121 (262)
T 3nol_A           46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVR  121 (262)
T ss_dssp             EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred             ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEE
Confidence            689998  579999975432 489999998655433332 222233667776  78999999999999999998766554


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc----CCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA----ADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~----~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      -+... ..+.+++-|  ++.||.++.   ..+|...+........-+..    ..+..+|.+...  +++||......+.
T Consensus       122 ti~~~-~eG~glt~d--g~~L~~SdG---s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~  193 (262)
T 3nol_A          122 SFNYD-GEGWGLTHN--DQYLIMSDG---TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNK  193 (262)
T ss_dssp             EEECS-SCCCCEEEC--SSCEEECCS---SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSE
T ss_pred             EEECC-CCceEEecC--CCEEEEECC---CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCe
Confidence            44422 356777766  899999983   46799998876543322221    114566777766  5899999999999


Q ss_pred             EEEEecCCCceEEEe--cC-----------CCceEEEEEE--CCEEEEEeCCCCcEEEEeC
Q psy5751         157 LECMTIRNRVRRKVY--SN-----------CTYPFGLSIT--DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       157 i~~~~~~g~~~~~~~--~~-----------~~~p~gla~~--~~~ly~td~~~~~i~~~~~  202 (232)
                      |.++|+..++.....  +.           ...|+|||++  +++||+|--.=.+++.+..
T Consensus       194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~  254 (262)
T 3nol_A          194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL  254 (262)
T ss_dssp             EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred             EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence            999999877664432  21           2367999997  6899999654455655543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.41  E-value=4.5e-10  Score=91.45  Aligned_cols=223  Identities=6%  Similarity=-0.019  Sum_probs=136.9

Q ss_pred             eEEEEEeCCCCEEEEEEcC---------CCCcEEEEEcCCCcee-EEEeC-----CCCCccEEEEeecCCeEEEEeCC-C
Q psy5751           2 LIGITVDCVEGQVYYSSVA---------DKSSIKRAHLDGKNVE-DVITT-----NIRSPEGLTFDWVNRVLYWTDSQ-M   65 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~---------~~~~i~~~~~~g~~~~-~~~~~-----~~~~p~gl~~d~~~~~ly~~d~~-~   65 (232)
                      | ++++++..+.||+++..         ++ .|..++....... ++-..     ....|.++++++.++.||+++.. .
T Consensus        53 p-~i~~spdg~~lyv~~~~~~~~~~g~~~~-~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~  130 (361)
T 2oiz_A           53 G-HVQVSNDGKKIYTMTTYHERITRGKRSD-VVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPA  130 (361)
T ss_dssp             E-EEEECTTSSEEEEEEEEETTSSSSCEEE-EEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSS
T ss_pred             C-ceEECCCCCEEEEEEecccccccCCCCC-EEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCC
Confidence            5 89999999999999852         23 5888988754432 33222     12579999999999999999875 6


Q ss_pred             CeEEEEeCCCCCCEEE-EeC---------CCCCceEEEEeCCCCeEEEEEcCCC--------------------------
Q psy5751          66 DTISMANLNDDQPKVI-VSK---------DLVNPRGIVVHPYYRKLFWSDWNRS--------------------------  109 (232)
Q Consensus        66 ~~I~~~~~~g~~~~~~-~~~---------~~~~p~~iavd~~~~~ly~~d~~~~--------------------------  109 (232)
                      +.|.++|.+....... +..         ....+.-+++.+.+..++|......                          
T Consensus       131 ~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (361)
T 2oiz_A          131 TSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALD  210 (361)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEEC
T ss_pred             CeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEeccc
Confidence            7899998876532221 110         0011223455553333443321100                          


Q ss_pred             ---------CCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEEC----------CCCcEEE
Q psy5751         110 ---------GPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDA----------DSKSLEC  159 (232)
Q Consensus       110 ---------~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~----------~~~~i~~  159 (232)
                               .++++.+++.+....+.-...        ....|.|   ++++++++++|++..          ..+.|+.
T Consensus       211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v  290 (361)
T 2oiz_A          211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV  290 (361)
T ss_dssp             SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred             CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence                     122344444333222221100        0112454   999999999999864          1358999


Q ss_pred             EecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         160 MTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       160 ~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +|+...+...-..... |.++++.  +.+||.++.  +.|..++..+..++.+..-...-..|.++++.+++
T Consensus       291 iD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G  359 (361)
T 2oiz_A          291 MDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG  359 (361)
T ss_dssp             EETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred             EECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence            9998765433333333 9999995  678999986  88999988765445454411223479999998875

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.41  E-value=1.4e-10  Score=92.99  Aligned_cols=185  Identities=12%  Similarity=0.042  Sum_probs=129.9

Q ss_pred             eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEE
Q psy5751          35 VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIE  114 (232)
Q Consensus        35 ~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~  114 (232)
                      .+.+.......+++.++++.++.|||++...+.|++++.++.....+ . ....+.+++.++ +|.+|++..    ..|+
T Consensus        40 ~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~-~~~~v~~i~~~~-dg~l~v~~~----~gl~  112 (326)
T 2ghs_A           40 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVH-A-LPFMGSALAKIS-DSKQLIASD----DGLF  112 (326)
T ss_dssp             CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-E-CSSCEEEEEEEE-TTEEEEEET----TEEE
T ss_pred             eEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-E-CCCcceEEEEeC-CCeEEEEEC----CCEE
Confidence            34445445567899999998899999999889999999987654433 2 224688999997 688888763    2499


Q ss_pred             EEeCCCCCcEEEEEcC---CCCCcceEEEeCCCCEEEEEECC------CCcEEEEecCCCceEEEecCCCceEEEEEE--
Q psy5751         115 WSNLDGTDREIFLKAA---DLKLPNSLAVDFRTDELCWVDAD------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--  183 (232)
Q Consensus       115 ~~~~~g~~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--  183 (232)
                      +++.++...+.+....   ....++++++|++ +++|+++..      .+.|++++ +| ..+.+......|.++++.  
T Consensus       113 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g-~~~~~~~~~~~~~~i~~s~d  189 (326)
T 2ghs_A          113 LRDTATGVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KG-KVTKLFADISIPNSICFSPD  189 (326)
T ss_dssp             EEETTTCCEEEEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TT-EEEEEEEEESSEEEEEECTT
T ss_pred             EEECCCCcEEEEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CC-cEEEeeCCCcccCCeEEcCC
Confidence            9998776665554321   0235789999997 678888753      46899998 54 444444555678999995  


Q ss_pred             CCEEEEEeCCCCcEEEEeCC--CC-Cc---ceEEeccCCcceeEEEEEEcCC
Q psy5751         184 DEKYYWTDWKTNRIESANKE--GE-RA---PSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       184 ~~~ly~td~~~~~i~~~~~~--g~-~~---~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +..||+++...+.|.+++.+  +. ..   +.+.........|.|+++..++
T Consensus       190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G  241 (326)
T 2ghs_A          190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG  241 (326)
T ss_dssp             SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS
T ss_pred             CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC
Confidence            44799999988999999975  22 22   2222111234578999987665

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.41  E-value=5.1e-10  Score=95.99  Aligned_cols=197  Identities=11%  Similarity=-0.010  Sum_probs=142.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEc--CCCceeEEEeCCCCCccEEEEee----cCCeEEEEeCCCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHL--DGKNVEDVITTNIRSPEGLTFDW----VNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~--~g~~~~~~~~~~~~~p~gl~~d~----~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      +.++++++..+.||.++.. + .|..+++  ........+.. -..|.++++++    .++.||+++...+.|.++|...
T Consensus       181 ~~~v~~spdg~~l~v~~~d-~-~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t  257 (543)
T 1nir_A          181 VHISRMSASGRYLLVIGRD-A-RIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET  257 (543)
T ss_dssp             EEEEEECTTSCEEEEEETT-S-EEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred             cceEEECCCCCEEEEECCC-C-eEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence            5788999999999999977 6 8999999  43332223333 35799999998    8999999998788999999876


Q ss_pred             CCCEEEEeC-----------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeCC
Q psy5751          76 DQPKVIVSK-----------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDFR  143 (232)
Q Consensus        76 ~~~~~~~~~-----------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~~  143 (232)
                      ..+...+..           ....+.++++++.++.+|++...  .++|..++..... ..+..... ...|.+++++++
T Consensus       258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~--~g~i~vvd~~~~~~l~~~~i~~-~~~~~~~~~spd  334 (543)
T 1nir_A          258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE--TGKVLLVNYKDIDNLTVTSIGA-APFLHDGGWDSS  334 (543)
T ss_dssp             CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT--TTEEEEEECTTSSSCEEEEEEC-CSSCCCEEECTT
T ss_pred             cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC--CCeEEEEEecCCCcceeEEecc-CcCccCceECCC
Confidence            655444432           12257789999878888888754  6789999886543 22111122 567999999999


Q ss_pred             CCEEEEEECCCCcEEEEecCCCceEEEecCC--Cce-EEEEE-E--CCEEEEEeC-CCCcEEEEeCCC
Q psy5751         144 TDELCWVDADSKSLECMTIRNRVRRKVYSNC--TYP-FGLSI-T--DEKYYWTDW-KTNRIESANKEG  204 (232)
Q Consensus       144 ~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~--~~p-~gla~-~--~~~ly~td~-~~~~i~~~~~~g  204 (232)
                      ++++|++....+.|..++...++........  ++| .|..+ +  .+.+|+|.. +.+.|..++.+.
T Consensus       335 g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~  402 (543)
T 1nir_A          335 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP  402 (543)
T ss_dssp             SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence            8889999988899999999876554433332  333 25554 3  378888875 568888888774

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=99.41  E-value=2e-11  Score=102.38  Aligned_cols=157  Identities=15%  Similarity=0.193  Sum_probs=115.6

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--C------CCCCceEEEEeCC---CCeEEEEE
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--K------DLVNPRGIVVHPY---YRKLFWSD  105 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~------~~~~p~~iavd~~---~~~ly~~d  105 (232)
                      +++..++..|.+|++++ .++||+++...++|++++.++.....+..  .      ....+.|||++|.   ++.||++.
T Consensus        20 ~~~a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~   98 (454)
T 1cru_A           20 KVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG   98 (454)
T ss_dssp             EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred             EEEECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence            45556789999999999 56799999887789999875433333332  2      1234569999987   89999998


Q ss_pred             cCC----------CCCcEEEEeCCCC-----CcEEEEEc---CCCCCcceEEEeCCCCEEEEEECC--------------
Q psy5751         106 WNR----------SGPKIEWSNLDGT-----DREIFLKA---ADLKLPNSLAVDFRTDELCWVDAD--------------  153 (232)
Q Consensus       106 ~~~----------~~~~I~~~~~~g~-----~~~~~~~~---~~~~~p~~l~~d~~~~~Ly~~d~~--------------  153 (232)
                      ...          ...+|.|..++..     ..++++..   ...+.+++|+++++ ++||++...              
T Consensus        99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd~~~~~~~~~~~~~~  177 (454)
T 1cru_A           99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGDQGRNQLAYLFLPNQ  177 (454)
T ss_dssp             EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECCTTTTSGGGTTSCCC
T ss_pred             eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECCCCCCCccccccccc
Confidence            530          0247888887543     23444431   12567899999997 789999431              


Q ss_pred             ------------------CCcEEEEecCCC-----------ceEEEecCCCceEEEEEE-CCEEEEEeCCCC
Q psy5751         154 ------------------SKSLECMTIRNR-----------VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTN  195 (232)
Q Consensus       154 ------------------~~~i~~~~~~g~-----------~~~~~~~~~~~p~gla~~-~~~ly~td~~~~  195 (232)
                                        .++|.|+++||+           ..+++...+..|.|++++ .+.||++|.+..
T Consensus       178 ~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~~  249 (454)
T 1cru_A          178 AQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGPN  249 (454)
T ss_dssp             TTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEECSS
T ss_pred             cccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEecCCC
Confidence                              368999999987           556778899999999997 689999997654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.41  E-value=8.4e-10  Score=85.02  Aligned_cols=185  Identities=15%  Similarity=0.071  Sum_probs=132.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      .|+.|+  ++.||.+....+ +|.+++++.... .++ ...-....|++++  ++.||.+....+.++++|.+......-
T Consensus        58 qGL~~~--~~~Ly~stG~~g-~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t  131 (268)
T 3nok_A           58 QGLVFH--QGHFFESTGHQG-TLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT  131 (268)
T ss_dssp             EEEEEE--TTEEEEEETTTT-EEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred             ceEEEE--CCEEEEEcCCCC-EEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence            688997  489999998888 899999986543 344 3332334667776  689999999999999999987665444


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                      +.. ...+.|++-|  ++.||.++.   ..+|...+.......--+...    .+..+|.|...  +++||...+..+.|
T Consensus       132 i~~-~~eGwGLt~D--g~~L~vSdG---s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I  203 (268)
T 3nok_A          132 TRY-SGEGWGLCYW--NGKLVRSDG---GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDV  203 (268)
T ss_dssp             EEC-SSCCCCEEEE--TTEEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEE
T ss_pred             EeC-CCceeEEecC--CCEEEEECC---CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeE
Confidence            442 2456788877  899999983   467999988765433222211    24466777766  58999999899999


Q ss_pred             EEEecCCCceEEEe--c------------CCCceEEEEEE--CCEEEEEeCCCCcEEEEe
Q psy5751         158 ECMTIRNRVRRKVY--S------------NCTYPFGLSIT--DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       158 ~~~~~~g~~~~~~~--~------------~~~~p~gla~~--~~~ly~td~~~~~i~~~~  201 (232)
                      .++|+..++.....  +            ....|+|||++  .++||+|.-.=.+++.+.
T Consensus       204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~  263 (268)
T 3nok_A          204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR  263 (268)
T ss_dssp             EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred             EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence            99999877654332  2            11368999997  689999965434555554

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.39  E-value=7.3e-09  Score=79.04  Aligned_cols=189  Identities=13%  Similarity=0.009  Sum_probs=131.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           2 LIGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      ..|+.|+.  +.||.+.-..+ ++|.++++........+. ..-....|++++  ++.||.+....+.++++|.+.....
T Consensus        23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~   98 (243)
T 3mbr_X           23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR   98 (243)
T ss_dssp             EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred             cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence            35899986  89999976542 489999998665433332 222334666666  7999999999999999999876654


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      ..+... ..+.+++-|  ++.||.++.   ..+|...+........-+...    .+..+|.|...  +++||...+..+
T Consensus        99 ~ti~~~-~~Gwglt~d--g~~L~vSdg---s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s~  170 (243)
T 3mbr_X           99 ARFRYP-GEGWALTSD--DSHLYMSDG---TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLTS  170 (243)
T ss_dssp             EEEECS-SCCCEEEEC--SSCEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTTT
T ss_pred             EEEeCC-CCceEEeeC--CCEEEEECC---CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCCC
Confidence            444422 367777766  899999983   467999988765443222211    13456666655  689999998999


Q ss_pred             cEEEEecCCCceEEEe--cC------------CCceEEEEEE--CCEEEEEeCCCCcEEEEeC
Q psy5751         156 SLECMTIRNRVRRKVY--SN------------CTYPFGLSIT--DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~--~~------------~~~p~gla~~--~~~ly~td~~~~~i~~~~~  202 (232)
                      .|.++|+..++.....  +.            ...|+|||++  .++||+|--.=.+++.+..
T Consensus       171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~  233 (243)
T 3mbr_X          171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL  233 (243)
T ss_dssp             EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred             eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence            9999999877664432  21            1357999997  6899999654456666554

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.39  E-value=6.7e-10  Score=91.76  Aligned_cols=195  Identities=16%  Similarity=0.171  Sum_probs=144.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC-------CCCeEEEEeCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS-------QMDTISMANLN   74 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~-------~~~~I~~~~~~   74 (232)
                      +.+++|++..+.||++...++ .|..+++........+.. ...+.++++++.++.||.+..       ..+.|.+.++.
T Consensus       214 ~~~~~~~~~~~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~  291 (433)
T 3bws_A          214 SKILLYDPIRDLVYCSNWISE-DISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD  291 (433)
T ss_dssp             EEEEEEETTTTEEEEEETTTT-EEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred             eeEEEEcCCCCEEEEEecCCC-cEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence            568999998899999987777 899999986554333332 356899999998888988874       35689999987


Q ss_pred             CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      ......... ....|.+++++|.++.||++...  .++|...+++.......+..  ...|.++++++++..||++....
T Consensus       292 ~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~  366 (433)
T 3bws_A          292 KEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMC--CSKIEVYDLKEKKVQKSIPV--FDKPNTIALSPDGKYLYVSCRGP  366 (433)
T ss_dssp             TTEEEEEEE-EEECEEEEEECSSTTEEEEEETT--TTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEECCC
T ss_pred             CCcEEeecc-CCCCcceEEECCCCCEEEEEecC--CCEEEEEECCCCcEEEEecC--CCCCCeEEEcCCCCEEEEEecCC
Confidence            654433332 22378899999977789998765  56799999886544433333  56789999999988999998753


Q ss_pred             --------------CcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         155 --------------KSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       155 --------------~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                                    +.|..+++...+..........|.++++.  +..|+++....+.|...+.+
T Consensus       367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~  431 (433)
T 3bws_A          367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD  431 (433)
T ss_dssp             CCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred             CccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence                          48999999876554444455678899984  56788888777888777654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.37  E-value=5.2e-11  Score=98.72  Aligned_cols=207  Identities=11%  Similarity=-0.015  Sum_probs=130.6

Q ss_pred             CeEEEEEeCCCCEEEEEEc---------CCCCcEEEEEcCCCceeE-EEeC-C-----CCCccEEEEeecCCeEEEEeCC
Q psy5751           1 MLIGITVDCVEGQVYYSSV---------ADKSSIKRAHLDGKNVED-VITT-N-----IRSPEGLTFDWVNRVLYWTDSQ   64 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~---------~~~~~i~~~~~~g~~~~~-~~~~-~-----~~~p~gl~~d~~~~~ly~~d~~   64 (232)
                      .| ++.+++..++||+++.         ..+ .|..++........ +... .     ...|.++++++.++.||+++..
T Consensus       120 ~P-gia~SpDgk~lyVan~~~~~~~~G~~~~-~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~  197 (426)
T 3c75_H          120 LP-HPVAAEDGSFFAQASTVFERIARGKRTD-YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS  197 (426)
T ss_dssp             SC-EEEECTTSSCEEEEEEEEEETTEEEEEE-EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS
T ss_pred             CC-ceEECCCCCEEEEEeccccccccCCCCC-EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC
Confidence            37 8999999999999996         244 79999988655433 3222 0     2579999999999999999875


Q ss_pred             -CCeEEEEeCCCCCCEEEEeC-C--CCCceE----EEEeCCCCeEEEEEcCCC---------------------------
Q psy5751          65 -MDTISMANLNDDQPKVIVSK-D--LVNPRG----IVVHPYYRKLFWSDWNRS---------------------------  109 (232)
Q Consensus        65 -~~~I~~~~~~g~~~~~~~~~-~--~~~p~~----iavd~~~~~ly~~d~~~~---------------------------  109 (232)
                       .+.|.++|+........+.. .  ...|.+    +++.+ .|.+.|.+....                           
T Consensus       198 ~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~-dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg  276 (426)
T 3c75_H          198 PAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCR-DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS  276 (426)
T ss_dssp             SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET-TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred             CCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcC-CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence             68899999877654322221 1  011222    45554 333333332100                           


Q ss_pred             --------CCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEECC---------CCcEEEEe
Q psy5751         110 --------GPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDAD---------SKSLECMT  161 (232)
Q Consensus       110 --------~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~~---------~~~i~~~~  161 (232)
                              .++++.+++.+....++-...        ....|.+   +++++++++||+++..         .+.|+.+|
T Consensus       277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID  356 (426)
T 3c75_H          277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN  356 (426)
T ss_dssp             CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred             CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence                    122334443332222111000        0012555   8999999999999742         35799999


Q ss_pred             cCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCCC-CCcceE
Q psy5751         162 IRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKEG-ERAPSI  210 (232)
Q Consensus       162 ~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~g-~~~~~i  210 (232)
                      ....++..-......|+++++.  +. ++|++++.++.|..++... +..+.+
T Consensus       357 ~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          357 AETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             TTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            9876653333333469999994  56 8999999999999999874 444444

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.37  E-value=1.2e-09  Score=83.32  Aligned_cols=175  Identities=15%  Similarity=0.126  Sum_probs=122.5

Q ss_pred             CCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG  120 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g  120 (232)
                      ..-.||.++.  +.||.+....  ..|.++|+.......... .......|++++  +++||...|.  .+++++++.+.
T Consensus        21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~--~~~v~v~D~~t   94 (243)
T 3mbr_X           21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWR--NHEGFVYDLAT   94 (243)
T ss_dssp             CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS--SSEEEEEETTT
T ss_pred             cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEee--CCEEEEEECCc
Confidence            3456999995  8999997654  589999998766544333 222233566666  8999999987  57899998875


Q ss_pred             CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ec----CCCceEEEEEECCEEEEEeCCC
Q psy5751         121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YS----NCTYPFGLSITDEKYYWTDWKT  194 (232)
Q Consensus       121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~----~~~~p~gla~~~~~ly~td~~~  194 (232)
                      .....-+...  ..+.||+  .++++||.+| +.++|+.+|+...+. ..+ ..    ....++.+.+.+++||...|.+
T Consensus        95 l~~~~ti~~~--~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s  169 (243)
T 3mbr_X           95 LTPRARFRYP--GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLT  169 (243)
T ss_dssp             TEEEEEEECS--SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTT
T ss_pred             CcEEEEEeCC--CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCC
Confidence            5443333332  2445555  5568999998 488999999987544 233 21    2244567888899999999999


Q ss_pred             CcEEEEeCC-CCCcceEEeccC----------CcceeEEEEEEcCC
Q psy5751         195 NRIESANKE-GERAPSIALDMM----------GTTYMYGIAAVPSS  229 (232)
Q Consensus       195 ~~i~~~~~~-g~~~~~i~~~~~----------~~~~p~gi~~~~~~  229 (232)
                      +.|.++++. |.....+.+...          ....|-|||..++.
T Consensus       170 ~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~  215 (243)
T 3mbr_X          170 SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH  215 (243)
T ss_dssp             TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred             CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC
Confidence            999999998 566667775521          12368999988753

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.36  E-value=1e-09  Score=87.17  Aligned_cols=200  Identities=11%  Similarity=-0.024  Sum_probs=136.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-----CCccEEEEeecCCeEEEEeC-----------CC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-----RSPEGLTFDWVNRVLYWTDS-----------QM   65 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-----~~p~gl~~d~~~~~ly~~d~-----------~~   65 (232)
                      |.++++++..+.+|+++...+ .|..+++........+....     ..|.++++++.++.||+++.           ..
T Consensus        36 ~~~~~~s~dg~~l~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~  114 (337)
T 1pby_B           36 PMVPMVAPGGRIAYATVNKSE-SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP  114 (337)
T ss_dssp             CCCEEECTTSSEEEEEETTTT-EEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred             ccceEEcCCCCEEEEEeCCCC-eEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence            567899998889999998777 89999997655433333211     27899999998889999962           34


Q ss_pred             CeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-----------------
Q psy5751          66 DTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-----------------  128 (232)
Q Consensus        66 ~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-----------------  128 (232)
                      +.|.++++++......+. ....|.+++++|.++.||+++     +.|+..++.+......+.                 
T Consensus       115 ~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l  188 (337)
T 1pby_B          115 TRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLG-----RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV  188 (337)
T ss_dssp             CEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEES-----SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC
T ss_pred             ceEEEEECCCCcEEEEEe-CCCCcceeEECCCCCEEEEeC-----CeEEEEECCCCcEeeeeeccccCCCceeCCCccEE
Confidence            789999997765444444 245688999999777788873     235555543221111000                 


Q ss_pred             ------------------------------------------------cCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751         129 ------------------------------------------------AADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus       129 ------------------------------------------------~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                                                                      ......|.+++++++++.||++   .+.|..+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~  265 (337)
T 1pby_B          189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESF  265 (337)
T ss_dssp             CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEE
T ss_pred             eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEE
Confidence                                                            0001356679999998899988   4789999


Q ss_pred             ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcceEEe
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAPSIAL  212 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~~i~~  212 (232)
                      +++..+..........|.++++.  +..||++ ...+.|..++.. ++....+..
T Consensus       266 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~~~~~~~~  319 (337)
T 1pby_B          266 DLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-GALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             ETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-SBSSEEEEEETTTCCEEEEEEC
T ss_pred             ECCCCcCcceecCCCceeeEEECCCCCEEEEE-cCCCcEEEEECcCCcEEEEEEc
Confidence            99876554444445678899985  4578887 446889999987 444445544

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.34  E-value=4.3e-10  Score=86.62  Aligned_cols=171  Identities=15%  Similarity=0.125  Sum_probs=122.8

Q ss_pred             cEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEE
Q psy5751          47 EGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREI  125 (232)
Q Consensus        47 ~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~  125 (232)
                      .||.++  ++.||.+....++|.++|+.... ...++. .-....|++++  +++||.+.|.  .+++++++.+......
T Consensus        58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~-~~~FgeGit~~--g~~Ly~ltw~--~~~v~V~D~~Tl~~~~  130 (268)
T 3nok_A           58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERL-GNIFAEGLASD--GERLYQLTWT--EGLLFTWSGMPPQRER  130 (268)
T ss_dssp             EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEEC-TTCCEEEEEEC--SSCEEEEESS--SCEEEEEETTTTEEEE
T ss_pred             ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECC-CCcceeEEEEe--CCEEEEEEcc--CCEEEEEECCcCcEEE
Confidence            799998  68999999998999999987655 344432 22123457776  8999999987  5789999887554433


Q ss_pred             EEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ec----CCCceEEEEEECCEEEEEeCCCCcEEE
Q psy5751         126 FLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YS----NCTYPFGLSITDEKYYWTDWKTNRIES  199 (232)
Q Consensus       126 ~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~----~~~~p~gla~~~~~ly~td~~~~~i~~  199 (232)
                      -+..  -..+.||+-|  +++||.+| +.++|..+|+...+. ..+ +.    ....++.|++.++.||...|.++.|.+
T Consensus       131 ti~~--~~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~v  205 (268)
T 3nok_A          131 TTRY--SGEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLE  205 (268)
T ss_dssp             EEEC--SSCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEE
T ss_pred             EEeC--CCceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEE
Confidence            3333  2345677755  58999998 588999999987544 223 21    234557888889999999999999999


Q ss_pred             EeCC-CCCcceEEeccC----------CcceeEEEEEEcCC
Q psy5751         200 ANKE-GERAPSIALDMM----------GTTYMYGIAAVPSS  229 (232)
Q Consensus       200 ~~~~-g~~~~~i~~~~~----------~~~~p~gi~~~~~~  229 (232)
                      +++. |+....|.+...          ....|-|||..++.
T Consensus       206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~  246 (268)
T 3nok_A          206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS  246 (268)
T ss_dssp             ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred             EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC
Confidence            9997 566667776421          12368999988653

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.34  E-value=8.3e-10  Score=85.00  Aligned_cols=174  Identities=16%  Similarity=0.130  Sum_probs=122.5

Q ss_pred             CCc--cEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCCCc--eEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751          44 RSP--EGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLVNP--RGIVVHPYYRKLFWSDWNRSGPKIEWSN  117 (232)
Q Consensus        44 ~~p--~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~p--~~iavd~~~~~ly~~d~~~~~~~I~~~~  117 (232)
                      ..+  .||.++  ++.||.+....  ..|.++|+.......... -...+  .|++++  +++||.+.|.  .+++.+++
T Consensus        41 ~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~~~FgeGit~~--g~~ly~ltw~--~~~v~v~D  113 (262)
T 3nol_A           41 TKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGKRYFGEGISDW--KDKIVGLTWK--NGLGFVWN  113 (262)
T ss_dssp             TTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCTTCCEEEEEEE--TTEEEEEESS--SSEEEEEE
T ss_pred             CCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCCccceeEEEEe--CCEEEEEEee--CCEEEEEE
Confidence            455  899998  57999987654  489999998766443333 12344  456776  8999999987  57899999


Q ss_pred             CCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ecC----CCceEEEEEECCEEEEEe
Q psy5751         118 LDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YSN----CTYPFGLSITDEKYYWTD  191 (232)
Q Consensus       118 ~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~~----~~~p~gla~~~~~ly~td  191 (232)
                      .+......-+...  ..+.|++.  ++++||.+|. .++|+.+|+...+. ..+ +..    ...++.+++.++.||+..
T Consensus       114 ~~t~~~~~ti~~~--~eG~glt~--dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~  188 (262)
T 3nol_A          114 IRNLRQVRSFNYD--GEGWGLTH--NDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV  188 (262)
T ss_dssp             TTTCCEEEEEECS--SCCCCEEE--CSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred             CccCcEEEEEECC--CCceEEec--CCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE
Confidence            8766544444432  24456654  4689999984 78999999986543 333 222    244556888899999999


Q ss_pred             CCCCcEEEEeCC-CCCcceEEeccCC---------cceeEEEEEEcCC
Q psy5751         192 WKTNRIESANKE-GERAPSIALDMMG---------TTYMYGIAAVPSS  229 (232)
Q Consensus       192 ~~~~~i~~~~~~-g~~~~~i~~~~~~---------~~~p~gi~~~~~~  229 (232)
                      |.++.|.++++. |+....|......         ...|-|||..++.
T Consensus       189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~  236 (262)
T 3nol_A          189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH  236 (262)
T ss_dssp             TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred             ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence            999999999997 5666677764211         2368999998753

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=99.33  E-value=1.8e-10  Score=91.51  Aligned_cols=179  Identities=11%  Similarity=-0.022  Sum_probs=125.3

Q ss_pred             CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC-------CceEEEE---eCCCCeEEEE-EcC---
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV-------NPRGIVV---HPYYRKLFWS-DWN---  107 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-------~p~~iav---d~~~~~ly~~-d~~---  107 (232)
                      .--.|++++.|...+.+|+++..++.|.+++.++.....+.-....       .+.||.+   |+. ++|+++ +.+   
T Consensus        11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af   89 (334)
T 2p9w_A           11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSF   89 (334)
T ss_dssp             TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTT
T ss_pred             cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccc
Confidence            3458999999998999999999999999999986654444222322       5689999   784 888884 420   


Q ss_pred             -------CCCCcEEEEeCC----CCCcEEEEEcC-----------CCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCC
Q psy5751         108 -------RSGPKIEWSNLD----GTDREIFLKAA-----------DLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRN  164 (232)
Q Consensus       108 -------~~~~~I~~~~~~----g~~~~~~~~~~-----------~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g  164 (232)
                             .....+.+++++    +.....+-...           ....++++++|+. |..|++++.. +.|++++++|
T Consensus        90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~~~~~I~rV~pdG  168 (334)
T 2p9w_A           90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFALGMPAIARVSADG  168 (334)
T ss_dssp             CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEESSCEEEEECTTS
T ss_pred             cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEeCCCCCCeEEEEeCCC
Confidence                   014678999998    44433322110           1235899999997 9999999998 9999999999


Q ss_pred             CceEEEecC------CCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEec--c--CCcceeEEE
Q psy5751         165 RVRRKVYSN------CTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALD--M--MGTTYMYGI  223 (232)
Q Consensus       165 ~~~~~~~~~------~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~--~--~~~~~p~gi  223 (232)
                      .....+...      ...+.||++.  +..|++++. .+++.+++........+...  .  .....|.||
T Consensus       169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgi  238 (334)
T 2p9w_A          169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKI  238 (334)
T ss_dssp             CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEE
T ss_pred             CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccc
Confidence            866655322      2336799996  557888888 89999999883222124332  1  124467775

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.32  E-value=1.3e-09  Score=85.38  Aligned_cols=210  Identities=6%  Similarity=-0.056  Sum_probs=144.5

Q ss_pred             CCEEEEEEcCCCCcEEEEEc-CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCc
Q psy5751          11 EGQVYYSSVADKSSIKRAHL-DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNP   89 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p   89 (232)
                      .+.+++++..++ +|+.++. +|....++-......+.++++.+. +++|++  ..+.|+.++.+|+..-.+-......+
T Consensus         4 ~~~~lv~~~~~~-~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd-G~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~   79 (276)
T 3no2_A            4 PQHLLVGGSGWN-KIAIINKDTKEIVWEYPLEKGWECNSVAATKA-GEILFS--YSKGAKMITRDGRELWNIAAPAGCEM   79 (276)
T ss_dssp             CCEEEEECTTCS-EEEEEETTTTEEEEEEECCTTCCCCEEEECTT-SCEEEE--CBSEEEEECTTSCEEEEEECCTTCEE
T ss_pred             CCcEEEeeCCCC-EEEEEECCCCeEEEEeCCCccCCCcCeEECCC-CCEEEe--CCCCEEEECCCCCEEEEEcCCCCccc
Confidence            467888887777 8999998 555444443332247899999984 556664  35689999997765443332222345


Q ss_pred             eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751          90 RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR  165 (232)
Q Consensus        90 ~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~  165 (232)
                      .+.+..+ +|.+++++... ..+++.++.+|.....+....    ....|.+++++++ +.+++++...++|..++.+|.
T Consensus        80 ~~~~~~~-dG~~lv~~~~~-~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~G~  156 (276)
T 3no2_A           80 QTARILP-DGNALVAWCGH-PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFATSEVREIAPNGQ  156 (276)
T ss_dssp             EEEEECT-TSCEEEEEEST-TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETTTTEEEEECTTSC
T ss_pred             cccEECC-CCCEEEEecCC-CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-CCEEEEecCCCEEEEECCCCC
Confidence            6777876 77888887641 457888888887654443221    1235778888886 667789999999999999965


Q ss_pred             ceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEecc---CCcceeEEEEEEcC
Q psy5751         166 VRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDM---MGTTYMYGIAAVPS  228 (232)
Q Consensus       166 ~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~---~~~~~p~gi~~~~~  228 (232)
                      ..-.+ .....|.++++. ++.+++++..+++|..++++ |+.+..+....   ..+..|.++++.++
T Consensus       157 ~~w~~-~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~  223 (276)
T 3no2_A          157 LLNSV-KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQN  223 (276)
T ss_dssp             EEEEE-ECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTT
T ss_pred             EEEEE-ECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCC
Confidence            44433 233568888875 78899999988999999999 88877775332   12456888877654

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.27  E-value=3.1e-09  Score=91.15  Aligned_cols=192  Identities=9%  Similarity=0.045  Sum_probs=139.8

Q ss_pred             EeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC--CCCCCEEEEeC
Q psy5751           7 VDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL--NDDQPKVIVSK   84 (232)
Q Consensus         7 ~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~--~g~~~~~~~~~   84 (232)
                      +++ ++.+|+++..++ .|..++.........+..+. .+.++++++.++.||.++.. +.|.++|+  ........+. 
T Consensus       145 ~~p-~~~~~vs~~~d~-~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~-  219 (543)
T 1nir_A          145 LDL-PNLFSVTLRDAG-QIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIK-  219 (543)
T ss_dssp             CCG-GGEEEEEEGGGT-EEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEE-
T ss_pred             cCC-CCEEEEEEcCCC-eEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEe-
Confidence            455 678999998888 99999988655444444332 48999999999999999987 89999999  3332222233 


Q ss_pred             CCCCceEEEEeC----CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----------CCCCcceEEEeCCCCEEEEE
Q psy5751          85 DLVNPRGIVVHP----YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----------DLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        85 ~~~~p~~iavd~----~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----------~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      ....|++++++|    .+++||++...  .+.|..++.........+...          ....+.+++++++++.+|++
T Consensus       220 ~g~~p~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs  297 (543)
T 1nir_A          220 IGIEARSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN  297 (543)
T ss_dssp             CCSEEEEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred             cCCCcceEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence            456799999999    89999998854  356777776654433333220          01256789999988999999


Q ss_pred             ECCCCcEEEEecCCCceEE--EecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCC
Q psy5751         151 DADSKSLECMTIRNRVRRK--VYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       151 d~~~~~i~~~~~~g~~~~~--~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~  205 (232)
                      ....++|+.+++...+...  .......|.+++++  +.++|++...++.|..++....
T Consensus       298 ~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg  356 (543)
T 1nir_A          298 VKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR  356 (543)
T ss_dssp             ETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred             ECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence            9999999999997543211  12345668888985  5578999988899999998743

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.27  E-value=2.7e-09  Score=84.75  Aligned_cols=150  Identities=13%  Similarity=0.059  Sum_probs=106.2

Q ss_pred             EEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-C-CccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCC---
Q psy5751          13 QVYYSSVADKSSIKRAHLDGKNVEDVITTNI-R-SPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDL---   86 (232)
Q Consensus        13 ~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-~-~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~---   86 (232)
                      .++++...++ .|..+++........+...- . .|.++++++.++.+|++....+.|.++++.+......+. ...   
T Consensus         2 ~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~   80 (337)
T 1pby_B            2 DYILAPARPD-KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER   80 (337)
T ss_dssp             EEEEEEETTT-EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred             cEEEEcCCCC-eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence            3566666666 78888887654433333221 1 589999999888999999888999999987765443333 211   


Q ss_pred             -CCceEEEEeCCCCeEEEEEcC-------C--CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          87 -VNPRGIVVHPYYRKLFWSDWN-------R--SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        87 -~~p~~iavd~~~~~ly~~d~~-------~--~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                       ..|.+++++|.++.||++...       .  ..+.|...++++......+..  ...|.++++++++++||++   .+.
T Consensus        81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~---~~~  155 (337)
T 1pby_B           81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL---GRD  155 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE---SSS
T ss_pred             cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe---CCe
Confidence             268899999977799998621       0  136799999876544333333  4578999999998889999   467


Q ss_pred             EEEEecCCCceE
Q psy5751         157 LECMTIRNRVRR  168 (232)
Q Consensus       157 i~~~~~~g~~~~  168 (232)
                      |..+++++.+..
T Consensus       156 i~~~d~~~~~~~  167 (337)
T 1pby_B          156 LHVMDPEAGTLV  167 (337)
T ss_dssp             EEEEETTTTEEE
T ss_pred             EEEEECCCCcEe
Confidence            999999876543

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.26  E-value=6.1e-10  Score=90.74  Aligned_cols=212  Identities=8%  Similarity=-0.059  Sum_probs=135.2

Q ss_pred             eEEEEEeCCCCEEEEEEc---------CCCCcEEEEEcCCCceeEEEeCC-------CCCccEEEEeecCCeEEEEeCC-
Q psy5751           2 LIGITVDCVEGQVYYSSV---------ADKSSIKRAHLDGKNVEDVITTN-------IRSPEGLTFDWVNRVLYWTDSQ-   64 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~---------~~~~~i~~~~~~g~~~~~~~~~~-------~~~p~gl~~d~~~~~ly~~d~~-   64 (232)
                      | ++.+++..+.||+++.         .++ .|..+++........+..+       ...|.++++++.++.||+++.. 
T Consensus        68 P-~i~~spDg~~lyVan~~~~r~~~G~~~~-~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~  145 (368)
T 1mda_H           68 S-LAVAGHSGSDFALASTSFARSAKGKRTD-YVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS  145 (368)
T ss_dssp             C-EEEECTTSSCEEEEEEEETTTTSSSEEE-EEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred             C-ceEECCCCCEEEEEcccccccccCCCCC-EEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence            6 8999999999999984         234 7999999876543333211       2579999999999999999875 


Q ss_pred             CCeEEE--EeCCCCCCEEE---------------------------Ee-CC------------------CCCceEEEEeC
Q psy5751          65 MDTISM--ANLNDDQPKVI---------------------------VS-KD------------------LVNPRGIVVHP   96 (232)
Q Consensus        65 ~~~I~~--~~~~g~~~~~~---------------------------~~-~~------------------~~~p~~iavd~   96 (232)
                      .+.+.+  +|...  ...+                           +. ..                  ...|.  + .+
T Consensus       146 ~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~  220 (368)
T 1mda_H          146 SAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-AN  220 (368)
T ss_dssp             SCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ET
T ss_pred             CCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cc
Confidence            466777  55533  1111                           10 00                  01122  2 33


Q ss_pred             CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcce---EEEeCCCCEEEEEEC---C-----CCcE
Q psy5751          97 YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPNS---LAVDFRTDELCWVDA---D-----SKSL  157 (232)
Q Consensus        97 ~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~~---l~~d~~~~~Ly~~d~---~-----~~~i  157 (232)
                      ..+.+||+..    +.+..++..+...+++..-.        ....|.+   +++++++++||++..   +     .+.+
T Consensus       221 ~~~~~~~vs~----~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~  296 (368)
T 1mda_H          221 YPGMLVWAVA----SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT  296 (368)
T ss_dssp             TTTEEEECBS----SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred             cCCEEEEEcC----CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence            4555666553    34777777654433322111        0224555   899999999999865   3     3456


Q ss_pred             EEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC-CCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751         158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW-KTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~-~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ..+|+...++..-......|+||++.  +.++|++.. .++.|..++... +..+.+.    ....|.||++.+.
T Consensus       297 ~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~----vg~~P~~i~~~~~  367 (368)
T 1mda_H          297 SSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE----LDKGPESLSVQNE  367 (368)
T ss_dssp             EEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC----CCSCCCEEECCCC
T ss_pred             EEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE----CCCCCCEEEeecC
Confidence            68888765442222233479999995  446999988 699999999874 3333332    2457899987653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.26  E-value=1.4e-09  Score=88.39  Aligned_cols=182  Identities=15%  Similarity=0.095  Sum_probs=117.3

Q ss_pred             cEEEEEcC--CCceeEEEe---CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC-CCCCEEE--Ee-C-CCCCceEEE
Q psy5751          24 SIKRAHLD--GKNVEDVIT---TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN-DDQPKVI--VS-K-DLVNPRGIV   93 (232)
Q Consensus        24 ~i~~~~~~--g~~~~~~~~---~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~--~~-~-~~~~p~~ia   93 (232)
                      .+..++++  |.....+..   .....|.++++++.++.||+++...+.|.+++++ ......+  +. . ....|++++
T Consensus       120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~  199 (365)
T 1jof_A          120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA  199 (365)
T ss_dssp             EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred             eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence            66666665  432222211   1346899999999888999999888899999987 3332222  22 1 256799999


Q ss_pred             EeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEE---EEEc-C-CC---C-------CcceEE-EeCCCCEEEEEECCCC
Q psy5751          94 VHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREI---FLKA-A-DL---K-------LPNSLA-VDFRTDELCWVDADSK  155 (232)
Q Consensus        94 vd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~---~~~~-~-~~---~-------~p~~l~-~d~~~~~Ly~~d~~~~  155 (232)
                      ++|.+++||++...  .+.|...+++.  .....   .+.. . ..   .       .|.+++ +++++++||+++...+
T Consensus       200 ~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~  277 (365)
T 1jof_A          200 MHPTGNYLYALMEA--GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK  277 (365)
T ss_dssp             ECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred             ECCCCCEEEEEECC--CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence            99977799998754  34566655542  22211   1111 1 01   1       488999 9999889999986554


Q ss_pred             -----cEEEEecC-CCceEEE---ec-CCCceEEEEE-----ECCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751         156 -----SLECMTIR-NRVRRKV---YS-NCTYPFGLSI-----TDEKYYWTDWKTNRIESANKEGERA  207 (232)
Q Consensus       156 -----~i~~~~~~-g~~~~~~---~~-~~~~p~gla~-----~~~~ly~td~~~~~i~~~~~~g~~~  207 (232)
                           .|..++++ .+..+.+   .. ....|.++++     ++.+||+++..++.|..++.++..+
T Consensus       278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l  344 (365)
T 1jof_A          278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL  344 (365)
T ss_dssp             TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred             CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence                 77777764 3333321   21 3345667776     3678999998888888888776533

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.23  E-value=7.3e-09  Score=82.70  Aligned_cols=200  Identities=13%  Similarity=-0.013  Sum_probs=132.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------CCCccEEEEeecCCeEEEEeCC-----------
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------IRSPEGLTFDWVNRVLYWTDSQ-----------   64 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------~~~p~gl~~d~~~~~ly~~d~~-----------   64 (232)
                      |.++++++..+.+|+++..++ .|+.++++.......+...      ...|.++++++.++.||++...           
T Consensus        45 ~~~~~~s~dg~~~~v~~~~~~-~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~  123 (349)
T 1jmx_B           45 PGTAMMAPDNRTAYVLNNHYG-DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK  123 (349)
T ss_dssp             SCEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred             CceeEECCCCCEEEEEeCCCC-cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence            567889997788999987777 8999999865543333321      2348999999988999998854           


Q ss_pred             CCeEEEEeCCCCC---CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC----------
Q psy5751          65 MDTISMANLNDDQ---PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD----------  131 (232)
Q Consensus        65 ~~~I~~~~~~g~~---~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~----------  131 (232)
                      .+.|.++++....   ...... ....+.+++++|.+ .+|++..     .|+.+++........+....          
T Consensus       124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg-~l~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  196 (349)
T 1jmx_B          124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG-SLYVAGP-----DIYKMDVKTGKYTVALPLRNWNRKGYSAPD  196 (349)
T ss_dssp             CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS-CEEEESS-----SEEEECTTTCCEEEEECSTTCCCTTBCCCB
T ss_pred             CCeEEEEECCCccccceeeecc-CCCcccceeECCCC-cEEEccC-----cEEEEeCCCCceeccccccccCCccccCcc
Confidence            5789999987622   222233 22357889999854 4877532     27777765443222221110          


Q ss_pred             ---------------------------------------------------------CCCcceEEEeC-CCCEEEEEECC
Q psy5751         132 ---------------------------------------------------------LKLPNSLAVDF-RTDELCWVDAD  153 (232)
Q Consensus       132 ---------------------------------------------------------~~~p~~l~~d~-~~~~Ly~~d~~  153 (232)
                                                                               ...|.++++++ +++.||++   
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---  273 (349)
T 1jmx_B          197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---  273 (349)
T ss_dssp             CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---
T ss_pred             ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---
Confidence                                                                     11455677778 88889888   


Q ss_pred             CCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcceEEec
Q psy5751         154 SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAPSIALD  213 (232)
Q Consensus       154 ~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~  213 (232)
                      .++|..++++..+..........|.++++.  ++.||++ ...+.|..++.. ++....+..+
T Consensus       274 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          274 LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTTEEEEEEECS
T ss_pred             cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEe-cCCCeEEEEeccccceeeeeecC
Confidence            678999999876654444444568889985  4578886 445889999986 4444555543

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.22  E-value=2.9e-09  Score=88.27  Aligned_cols=212  Identities=13%  Similarity=0.093  Sum_probs=133.0

Q ss_pred             CCCEEEEEEcCC----CCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCC
Q psy5751          10 VEGQVYYSSVAD----KSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDD   76 (232)
Q Consensus        10 ~~~~ly~~d~~~----~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~   76 (232)
                      ..+++|+++...    + .|.++++........+..+ ..| ++++++.++.||+++.         ..+.|.++|....
T Consensus        83 ~~~~vyV~n~~~~~~~~-~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           83 DARRVYIQDPAHFAAIT-QQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CTTEEEEEECTTTCSSE-EEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCEEEEECCCcCCCCC-eEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            457899999865    5 8999999876654445444 468 9999999999999985         3567999998776


Q ss_pred             CCEEEEe-C------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC--CCCcce----EEE---
Q psy5751          77 QPKVIVS-K------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD--LKLPNS----LAV---  140 (232)
Q Consensus        77 ~~~~~~~-~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~--~~~p~~----l~~---  140 (232)
                      .....+. .      ....|.+++++|.+++||+++... .+.|..+++......--+....  ...|.+    +++   
T Consensus       160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~-~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~d  238 (426)
T 3c75_H          160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP-APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRD  238 (426)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS-SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETT
T ss_pred             cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC-CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCC
Confidence            6433222 1      135799999999999999998541 3568788776543221111100  001112    333   


Q ss_pred             ----------------------------------eCCCCEEEEEECCCCcEEEEecCCCceEEEec----------CCCc
Q psy5751         141 ----------------------------------DFRTDELCWVDADSKSLECMTIRNRVRRKVYS----------NCTY  176 (232)
Q Consensus       141 ----------------------------------d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----------~~~~  176 (232)
                                                        +++.+++|++.. .+.++.++..+.....+..          ....
T Consensus       239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~  317 (426)
T 3c75_H          239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIEALTEAERADDWR  317 (426)
T ss_dssp             SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred             CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence                                              344444444432 3456666665543332211          0112


Q ss_pred             eEE---EEEE--CCEEEEEeC---------CCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         177 PFG---LSIT--DEKYYWTDW---------KTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       177 p~g---la~~--~~~ly~td~---------~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      |.|   ++++  +++||+++.         .++.|..++... +....+..    ...|.+|++.+++-
T Consensus       318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v----g~~P~gia~spDg~  382 (426)
T 3c75_H          318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL----GHEIDSINVSQDAE  382 (426)
T ss_dssp             ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECCSSS
T ss_pred             cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC----CCCcCeEEEccCCC
Confidence            444   6664  689999974         245799999874 44445543    33799999988754

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.22  E-value=3.1e-08  Score=85.21  Aligned_cols=198  Identities=9%  Similarity=0.016  Sum_probs=138.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEEeCCCCCccEEEEe----ecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVITTNIRSPEGLTFD----WVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~~~~~~~p~gl~~d----~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      |.++.+++..+.||+++. ++ .|..+++.  .......+..+ ..|.+++++    +.++.+|++++..+.+.++|...
T Consensus       199 p~~v~~SpDGr~lyv~~~-dg-~V~viD~~~~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t  275 (567)
T 1qks_A          199 VHISRLSASGRYLFVIGR-DG-KVNMIDLWMKEPTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET  275 (567)
T ss_dssp             EEEEEECTTSCEEEEEET-TS-EEEEEETTSSSCCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred             ccceEECCCCCEEEEEcC-CC-eEEEEECCCCCCcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence            678999998899999884 45 79999994  22222223333 579999999    58899999999999999999776


Q ss_pred             CCCEEEEeCC-----------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751          76 DQPKVIVSKD-----------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT  144 (232)
Q Consensus        76 ~~~~~~~~~~-----------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~  144 (232)
                      ......+...           ..++.+++..+....++++..  +.++|..++........+........|.++.+++++
T Consensus       276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~--~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdg  353 (567)
T 1qks_A          276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK--ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH  353 (567)
T ss_dssp             CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET--TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred             CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec--CCCeEEEEecCCCccceeeeeeccccccCceECCCC
Confidence            5544433311           124567888775555555553  467899998865532222221114578899999999


Q ss_pred             CEEEEEECCCCcEEEEecCCCceEEEec---CCCce-EEEEE-E--CCEEEEEe-CCCCcEEEEeCCC
Q psy5751         145 DELCWVDADSKSLECMTIRNRVRRKVYS---NCTYP-FGLSI-T--DEKYYWTD-WKTNRIESANKEG  204 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---~~~~p-~gla~-~--~~~ly~td-~~~~~i~~~~~~g  204 (232)
                      .++|+++...++|..+|....+......   ...+| .|..+ +  .+.+|+|. .+++.|..++.+.
T Consensus       354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~  421 (567)
T 1qks_A          354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP  421 (567)
T ss_dssp             CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence            9999999999999999998765433333   33444 36665 3  36777764 4668999999875

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.22  E-value=3.1e-09  Score=86.82  Aligned_cols=215  Identities=10%  Similarity=0.095  Sum_probs=132.3

Q ss_pred             eEEEEEeCCCCEEEEEEcC-CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVA-DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~-~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      |.++.+++..++||+++.. .+ .|..+++........+..  .... ..... +...|++....+++..++++......
T Consensus       139 P~~~a~spDGk~lyVan~~~~~-~VsVID~~t~~vv~tI~v--~g~~-~~~P~-g~~~~~~~~~DG~~~~v~~~~~g~v~  213 (386)
T 3sjl_D          139 PWMTSLTPDGKTLLFYQFSPAP-AVGVVDLEGKAFKRMLDV--PDCY-HIFPT-APDTFFMHCRDGSLAKVAFGTEGTPE  213 (386)
T ss_dssp             GGGEEECTTSSEEEEEECSSSC-EEEEEETTTTEEEEEEEC--CSEE-EEEEE-ETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred             CceEEEcCCCCEEEEEEcCCCC-eEEEEECCCCcEEEEEEC--CCcc-eeecC-CCceeEEECCCCCEEEEECCCCCeEE
Confidence            4568999999999999975 56 899999987665444432  1222 22222 33344455555666666665422111


Q ss_pred             EEeCCC----CCceE--EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------CCCCcc---eEEEeCC
Q psy5751          81 IVSKDL----VNPRG--IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------DLKLPN---SLAVDFR  143 (232)
Q Consensus        81 ~~~~~~----~~p~~--iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~~~~p~---~l~~d~~  143 (232)
                      ......    ..|..  .+++...|+++|...   .++++.+++.+...+++-...        .-..|.   .++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~---~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~  290 (386)
T 3sjl_D          214 ITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY---TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA  290 (386)
T ss_dssp             EEECCCCSCTTSCBCSCCEEETTTTEEEEEBT---TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred             EeecceeccccccccccceeEcCCCcEEEEeC---CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCC
Confidence            111111    12222  355555787766554   357999999877654432110        011233   3888999


Q ss_pred             CCEEEEEEC---------CCCcEEEEecCCCceEEEecCCCceEEEEEE--CC-EEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751         144 TDELCWVDA---------DSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DE-KYYWTDWKTNRIESANKE-GERAPSI  210 (232)
Q Consensus       144 ~~~Ly~~d~---------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~-~ly~td~~~~~i~~~~~~-g~~~~~i  210 (232)
                      .++||++..         ..++|+.+|+...++..-......|++|++.  +. .||.+++.++.|..++.. ++..+.+
T Consensus       291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i  370 (386)
T 3sjl_D          291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV  370 (386)
T ss_dssp             TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence            999999964         2368999999877654333333478899994  33 799999999999999986 5555555


Q ss_pred             EeccCCcceeEEEEEEcC
Q psy5751         211 ALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       211 ~~~~~~~~~p~gi~~~~~  228 (232)
                      ..    +.+|-.+++..+
T Consensus       371 ~~----~~~p~~l~~s~d  384 (386)
T 3sjl_D          371 NQ----LGHGPQVITTAD  384 (386)
T ss_dssp             CC----CCSSCCEEEECC
T ss_pred             cC----CCCCceeEECCc
Confidence            43    445666665544

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.21  E-value=1.4e-08  Score=80.96  Aligned_cols=156  Identities=8%  Similarity=0.014  Sum_probs=107.4

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      |+++.. ++.+|+++..++ .|+.+++........+.. ....|.++++++.++.+|++....+.|.++++++......+
T Consensus         4 g~~~~~-~~~~~v~~~~~~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~   81 (349)
T 1jmx_B            4 GPALKA-GHEYMIVTNYPN-NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA   81 (349)
T ss_dssp             CCCCCT-TCEEEEEEETTT-EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cccccC-CCEEEEEeCCCC-eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence            455554 788999998888 999999986554333332 22268999999988889999988899999999865544333


Q ss_pred             e-CC-----CCCceEEEEeCCCCeEEEEEcC---------CCCCcEEEEeCCCCC---cEEEEEcCCCCCcceEEEeCCC
Q psy5751          83 S-KD-----LVNPRGIVVHPYYRKLFWSDWN---------RSGPKIEWSNLDGTD---REIFLKAADLKLPNSLAVDFRT  144 (232)
Q Consensus        83 ~-~~-----~~~p~~iavd~~~~~ly~~d~~---------~~~~~I~~~~~~g~~---~~~~~~~~~~~~p~~l~~d~~~  144 (232)
                      . ..     ...|.+++++|.++.||++...         ...+.|...++....   .......  -..+.++++++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg  159 (349)
T 1jmx_B           82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDG  159 (349)
T ss_dssp             ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTS
T ss_pred             EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC--CCcccceeECCCC
Confidence            3 11     2348899999988889988732         113578888887522   1122222  2367899999986


Q ss_pred             CEEEEEECCCCcEEEEecCCCce
Q psy5751         145 DELCWVDADSKSLECMTIRNRVR  167 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~  167 (232)
                      . ||++.   +.|..+++...+.
T Consensus       160 ~-l~~~~---~~i~~~d~~~~~~  178 (349)
T 1jmx_B          160 S-LYVAG---PDIYKMDVKTGKY  178 (349)
T ss_dssp             C-EEEES---SSEEEECTTTCCE
T ss_pred             c-EEEcc---CcEEEEeCCCCce
Confidence            5 88863   3488888765543

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=99.18  E-value=7.1e-08  Score=78.39  Aligned_cols=190  Identities=13%  Similarity=0.158  Sum_probs=133.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCC------------C--CcEEEEEcCCC--ceeEEE-eC-----CCCCccEEEEeec-----
Q psy5751           2 LIGITVDCVEGQVYYSSVAD------------K--SSIKRAHLDGK--NVEDVI-TT-----NIRSPEGLTFDWV-----   54 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~------------~--~~i~~~~~~g~--~~~~~~-~~-----~~~~p~gl~~d~~-----   54 (232)
                      +.++.+|. .++||+.|.+.            .  ++|..+++...  ..-+.+ .+     .-....+|++|..     
T Consensus        89 V~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~  167 (381)
T 3q6k_A           89 IYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD  167 (381)
T ss_dssp             EEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred             eeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence            56889997 89999999761            1  47889999876  432222 11     1234678999922     


Q ss_pred             --CCeEEEEeCCCCeEEEEeCCCCCCEEEEe----CC--------------CCCceEEEEeCC----CCeEEEEEcCCCC
Q psy5751          55 --NRVLYWTDSQMDTISMANLNDDQPKVIVS----KD--------------LVNPRGIVVHPY----YRKLFWSDWNRSG  110 (232)
Q Consensus        55 --~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~--------------~~~p~~iavd~~----~~~ly~~d~~~~~  110 (232)
                        .+.+|++|.....|.++|+.......+..    ..              .....|||++|.    .+.|||....  .
T Consensus       168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls--s  245 (381)
T 3q6k_A          168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS--A  245 (381)
T ss_dssp             SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS--C
T ss_pred             CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC--C
Confidence              57899999998999999987654322221    00              246789999997    7899999976  3


Q ss_pred             CcEEEEe---CC-C---CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC-----CceEEEec--CCCc
Q psy5751         111 PKIEWSN---LD-G---TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN-----RVRRKVYS--NCTY  176 (232)
Q Consensus       111 ~~I~~~~---~~-g---~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-----~~~~~~~~--~~~~  176 (232)
                      .+++++.   |. .   ...+.+..........++++|..+|.||+++...+.|.+.+.++     .+..++++  .+.+
T Consensus       246 ~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~  325 (381)
T 3q6k_A          246 IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVF  325 (381)
T ss_dssp             SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCS
T ss_pred             CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccc
Confidence            4678776   21 1   22333333210233446788866799999999999999999987     34566654  7889


Q ss_pred             eEEEEEE-CCEEEEEeCCC
Q psy5751         177 PFGLSIT-DEKYYWTDWKT  194 (232)
Q Consensus       177 p~gla~~-~~~ly~td~~~  194 (232)
                      |.++.++ ++.||++..+-
T Consensus       326 pd~~~i~~~g~Lwv~sn~l  344 (381)
T 3q6k_A          326 GTDISVDSKGGLWFMSNGF  344 (381)
T ss_dssp             EEEEEECTTSCEEEEECSC
T ss_pred             cCeEEECCCCeEEEEECcc
Confidence            9999996 78999987553

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.18  E-value=3.1e-08  Score=81.96  Aligned_cols=204  Identities=11%  Similarity=0.069  Sum_probs=143.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC--CCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ--MDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~   78 (232)
                      ..+++|.+..+.|+++....+ ..|+.+++.+.....+. ........+++.+.++.|+++...  ...|+..++.+...
T Consensus       181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~-~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~  259 (415)
T 2hqs_A          181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI  259 (415)
T ss_dssp             EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred             ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee-cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence            357889998888988876542 37999999876654443 333467889999988888877644  34699999987665


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCc
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKS  156 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~  156 (232)
                      ..+.. .......++.+|.+..|+++.......+|+.+++++.....+...  ......+++++++..|+++...  ...
T Consensus       260 ~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g~~~  336 (415)
T 2hqs_A          260 RQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGGQQH  336 (415)
T ss_dssp             EECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred             EeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCCceE
Confidence            44333 334567899999777788776433356899999988765543322  3456689999998899888654  358


Q ss_pred             EEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCC--cEEEEeCCCCCcceE
Q psy5751         157 LECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTN--RIESANKEGERAPSI  210 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~--~i~~~~~~g~~~~~i  210 (232)
                      |+.++++++..+.+... ....++++.  +..|+++....+  .|+.++.+|...+.+
T Consensus       337 i~~~d~~~~~~~~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l  393 (415)
T 2hqs_A          337 IAKQDLATGGVQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL  393 (415)
T ss_dssp             EEEEETTTCCEEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred             EEEEECCCCCEEEecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence            99999998776555433 256778874  456777654443  789999887765544

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.18  E-value=5.8e-09  Score=88.93  Aligned_cols=191  Identities=10%  Similarity=0.071  Sum_probs=138.1

Q ss_pred             CCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEE-e-ecCCeEEEEeC-----------------CCCeEE
Q psy5751          10 VEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTF-D-WVNRVLYWTDS-----------------QMDTIS   69 (232)
Q Consensus        10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~-d-~~~~~ly~~d~-----------------~~~~I~   69 (232)
                      ...+||++|..+. +|.+++++.....+++. +....|.|+++ . +.++.+|++..                 ..+.+.
T Consensus       100 DG~~lfVnd~~~~-rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A          100 DGRFLFMNDKANT-RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEEEEETTTT-EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             CCCEEEEEcCCCC-EEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            3579999998888 99999999876555544 33468999998 4 78999999852                 234788


Q ss_pred             EEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC-----------------------------------CcEE
Q psy5751          70 MANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG-----------------------------------PKIE  114 (232)
Q Consensus        70 ~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~-----------------------------------~~I~  114 (232)
                      ++|.+......-+.... +|.++++++.++++|++..+.+.                                   +.+.
T Consensus       179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~  257 (595)
T 1fwx_A          179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  257 (595)
T ss_dssp             EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence            88888644332222222 79999999999999999865322                                   1244


Q ss_pred             EEeCCC--CCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCc----------eEEE--ecCCCceEE
Q psy5751         115 WSNLDG--TDR-EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRV----------RRKV--YSNCTYPFG  179 (232)
Q Consensus       115 ~~~~~g--~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~----------~~~~--~~~~~~p~g  179 (232)
                      .++...  ... ...+..  -..|.|+.+++++.++|+++...++|..++++..+          ....  .+....|.+
T Consensus       258 VID~~~~~~~~~~~~Ipv--g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h  335 (595)
T 1fwx_A          258 VVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH  335 (595)
T ss_dssp             EEECSGGGCCSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred             EEeCcccCCceeEEEEec--CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence            444443  111 112222  34899999999999999999999999999998432          1122  235577999


Q ss_pred             EEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         180 LSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       180 la~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ++++ +|++|++.+-+..|..++.+.
T Consensus       336 ~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          336 TAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             EEECCCCeEEEEEecCCcEEEEEhhH
Confidence            9996 579999999999999999764

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.17  E-value=1.5e-08  Score=79.38  Aligned_cols=210  Identities=12%  Similarity=0.062  Sum_probs=141.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC-CCeEEEEeCCCCCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ-MDTISMANLNDDQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~   80 (232)
                      +.++.+.+. +.++++  ..+ .|+.++.+|....++-...-..+.++.+.+ ++.+++++.. +++++.++.+|+....
T Consensus        39 ~~~~~~~pd-G~ilvs--~~~-~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~  113 (276)
T 3no2_A           39 CNSVAATKA-GEILFS--YSK-GAKMITRDGRELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSK  113 (276)
T ss_dssp             CCEEEECTT-SCEEEE--CBS-EEEEECTTSCEEEEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECTTSCEEEE
T ss_pred             CcCeEECCC-CCEEEe--CCC-CEEEECCCCCEEEEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeCCCCEEEE
Confidence            345677774 445553  244 788888877655554432223455667766 5567778776 7899999998876544


Q ss_pred             EEe-CC----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          81 IVS-KD----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        81 ~~~-~~----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      +-. ..    ...|.++++++ +|.+++++..  .++|..++.+|......-.   -..|.++.+.+. +.+++++...+
T Consensus       114 ~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~--~~~v~~~d~~G~~~w~~~~---~~~~~~~~~~~~-g~~~v~~~~~~  186 (276)
T 3no2_A          114 TEFETGIERPHAQFRQINKNK-KGNYLVPLFA--TSEVREIAPNGQLLNSVKL---SGTPFSSAFLDN-GDCLVACGDAH  186 (276)
T ss_dssp             EEECCSCSSGGGSCSCCEECT-TSCEEEEETT--TTEEEEECTTSCEEEEEEC---SSCCCEEEECTT-SCEEEECBTTS
T ss_pred             EeccCCCCcccccccCceECC-CCCEEEEecC--CCEEEEECCCCCEEEEEEC---CCCccceeEcCC-CCEEEEeCCCC
Confidence            332 11    12467788887 6777888865  5789999998655444322   246888888875 78888888888


Q ss_pred             cEEEEecC-CCceEEEec------CCCceEEEEEE-CCEEEEEeCC----------CCcEEEEeCCCCCcceEEeccCCc
Q psy5751         156 SLECMTIR-NRVRRKVYS------NCTYPFGLSIT-DEKYYWTDWK----------TNRIESANKEGERAPSIALDMMGT  217 (232)
Q Consensus       156 ~i~~~~~~-g~~~~~~~~------~~~~p~gla~~-~~~ly~td~~----------~~~i~~~~~~g~~~~~i~~~~~~~  217 (232)
                      +|..++++ |...-.+..      .+..|.++++. ++.+|+++++          ..++..++++|+.+..+.- ....
T Consensus       187 ~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~-~~~~  265 (276)
T 3no2_A          187 CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLND-KVKF  265 (276)
T ss_dssp             EEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECC-TTTS
T ss_pred             eEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecC-cccc
Confidence            99999999 655544532      35568899985 8999999973          3468899998887665432 2335


Q ss_pred             ceeEEEE
Q psy5751         218 TYMYGIA  224 (232)
Q Consensus       218 ~~p~gi~  224 (232)
                      .++.+|.
T Consensus       266 ~~~~~~~  272 (276)
T 3no2_A          266 GMISTIC  272 (276)
T ss_dssp             CCCCEEE
T ss_pred             cceeeee
Confidence            6666653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.15  E-value=7e-09  Score=84.23  Aligned_cols=163  Identities=13%  Similarity=0.031  Sum_probs=112.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC-CCceeEE--Ee-C-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD-GKNVEDV--IT-T-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--   74 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~-g~~~~~~--~~-~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--   74 (232)
                      |.++++++..+.||+++...+ +|+.++++ ......+  +. . ....|.++++++.++.||+++...+.|.+++++  
T Consensus       147 ~~~~~~spdG~~l~~~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~  225 (365)
T 1jof_A          147 IHGMVFDPTETYLYSADLTAN-KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             EEEEEECTTSSEEEEEETTTT-EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             ceEEEECCCCCEEEEEcCCCC-EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC
Confidence            678999998889999998777 89999987 3333222  22 1 135799999999888999999877888887765  


Q ss_pred             -CCCCE--EEEe---CCC---C-------CceEEE-EeCCCCeEEEEEcCCC---CCcEEEEeCC-CCCcEEE---EEcC
Q psy5751          75 -DDQPK--VIVS---KDL---V-------NPRGIV-VHPYYRKLFWSDWNRS---GPKIEWSNLD-GTDREIF---LKAA  130 (232)
Q Consensus        75 -g~~~~--~~~~---~~~---~-------~p~~ia-vd~~~~~ly~~d~~~~---~~~I~~~~~~-g~~~~~~---~~~~  130 (232)
                       |....  ..+.   ...   .       .|.+++ ++|.+++||+++.+.+   .+.|...+++ ......+   ....
T Consensus       226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~  305 (365)
T 1jof_A          226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP  305 (365)
T ss_dssp             TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred             CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence             32211  1122   111   2       488999 9998788998875432   1257666664 2223321   2222


Q ss_pred             CCCCcceEEEeC---CCCEEEEEECCCCcEEEEecCCCc
Q psy5751         131 DLKLPNSLAVDF---RTDELCWVDADSKSLECMTIRNRV  166 (232)
Q Consensus       131 ~~~~p~~l~~d~---~~~~Ly~~d~~~~~i~~~~~~g~~  166 (232)
                       ...|.++++++   ++++||+++...+.|..++.++..
T Consensus       306 -~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~  343 (365)
T 1jof_A          306 -TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             -SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             -CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence             45789999999   789999998877888887777653

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.15  E-value=9e-08  Score=82.37  Aligned_cols=190  Identities=8%  Similarity=-0.009  Sum_probs=135.2

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCC--CCCCEEEEeCCCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLN--DDQPKVIVSKDLVN   88 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~~~~~~~~   88 (232)
                      .+.+|+++...+ .|..++.+.......+..+ ..|.++++++.++.+|+++. .+.|.++|+.  ......-+. ....
T Consensus       166 ~~~~~V~~~~~~-~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~-~G~~  241 (567)
T 1qks_A          166 ENLFSVTLRDAG-QIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIK-IGSE  241 (567)
T ss_dssp             GGEEEEEETTTT-EEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEE-CCSE
T ss_pred             CceEEEEeCCCC-eEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEe-cCCC
Confidence            578999998888 9999999876554444433 47889999999999999874 5789999995  222222222 3457


Q ss_pred             ceEEEEe----CCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC----------CCCcceEEEeCCCCEEEEEECCC
Q psy5751          89 PRGIVVH----PYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD----------LKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        89 p~~iavd----~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~----------~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      |.+++++    |.++++|++...  .+.+..++.........+....          ...+.++.+++.+...+++....
T Consensus       242 P~~ia~s~~~~pDGk~l~v~n~~--~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~  319 (567)
T 1qks_A          242 ARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET  319 (567)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred             CceeEEccccCCCCCEEEEEEcc--CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence            9999999    578899999865  4567777765444332222110          11345788888777888888888


Q ss_pred             CcEEEEecCCCceEEE--ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         155 KSLECMTIRNRVRRKV--YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~--~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      ++|+.+++...+...+  ......|+++.++  +.++|+++..+++|..++.....
T Consensus       320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k  375 (567)
T 1qks_A          320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK  375 (567)
T ss_dssp             TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred             CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence            9999999976532222  2345568888885  56899999999999999987443

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.12  E-value=1.8e-07  Score=76.35  Aligned_cols=110  Identities=8%  Similarity=0.022  Sum_probs=75.5

Q ss_pred             CCCCEEEEEEc-CCCC--cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCC
Q psy5751           9 CVEGQVYYSSV-ADKS--SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDD   76 (232)
Q Consensus         9 ~~~~~ly~~d~-~~~~--~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~   76 (232)
                      +...++|++|. ....  .|.+++.+.......+..+ ..| ++++.+.++.||+++.         ..+.|.++|....
T Consensus        30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~  107 (373)
T 2mad_H           30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF  107 (373)
T ss_pred             CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence            45578999987 4331  5688888755443334433 467 9999999999999985         2467889998754


Q ss_pred             CCEEEEeCC-------CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751          77 QPKVIVSKD-------LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD  122 (232)
Q Consensus        77 ~~~~~~~~~-------~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~  122 (232)
                      .....+...       ...|.+++++|.+++||++.... ...|..++ +...
T Consensus       108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-~~~v~viD-~t~~  158 (373)
T 2mad_H          108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GPAVGLVV-QGGS  158 (373)
T ss_pred             cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-CCeEEEEE-CCCC
Confidence            433222211       25799999999999999997542 35688887 5443

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.07  E-value=4.3e-08  Score=75.95  Aligned_cols=202  Identities=8%  Similarity=0.014  Sum_probs=134.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC-CceeEEEeCC-CCCccEEEEeecCCeEEEEeCC---CCeEEEEeCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDG-KNVEDVITTN-IRSPEGLTFDWVNRVLYWTDSQ---MDTISMANLNDD   76 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g-~~~~~~~~~~-~~~p~gl~~d~~~~~ly~~d~~---~~~I~~~~~~g~   76 (232)
                      +.+++|++....|+++.  .+ .|+.+++++ .....+.... ...+..+++.+.++.|+++...   ...|+.++.++.
T Consensus        44 v~~~~~spdg~~l~~~~--~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~  120 (297)
T 2ojh_A           44 FEAPNWSPDGKYLLLNS--EG-LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG  120 (297)
T ss_dssp             CEEEEECTTSSEEEEEE--TT-EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC
T ss_pred             eEeeEECCCCCEEEEEc--CC-eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC
Confidence            45789999888887765  44 899999987 6554443222 2456789999988888888733   568999998877


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CC
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DS  154 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~  154 (232)
                      ....+..  ......++++|.+..|+++.......+|+.+++++.....+...  ...+..+++++++..|+++..  ..
T Consensus       121 ~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~  196 (297)
T 2ojh_A          121 TPRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG--EGRNDGPDYSPDGRWIYFNSSRTGQ  196 (297)
T ss_dssp             CCEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS--SSCEEEEEECTTSSEEEEEECTTSS
T ss_pred             ceEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC--CCccccceECCCCCEEEEEecCCCC
Confidence            6555433  23477889999777788665432234677777776655443332  456789999999888888754  34


Q ss_pred             CcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCC----------CCcEEEEeCCCCCcceE
Q psy5751         155 KSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWK----------TNRIESANKEGERAPSI  210 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~----------~~~i~~~~~~g~~~~~i  210 (232)
                      .+|+.++.++.....+.........+++.  +..|+++...          ...|+.++..+...+.+
T Consensus       197 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~  264 (297)
T 2ojh_A          197 MQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL  264 (297)
T ss_dssp             CEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred             ccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence            57888887776665554333344566663  4566666442          25688888876655433

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.06  E-value=3.9e-08  Score=81.32  Aligned_cols=218  Identities=12%  Similarity=0.015  Sum_probs=144.2

Q ss_pred             CCCCEEEEEEcCCCCcEEEEEcCCC----ceeEEEe-------CCCCCccEEEEeecCCeEEEEeCCC------CeEEEE
Q psy5751           9 CVEGQVYYSSVADKSSIKRAHLDGK----NVEDVIT-------TNIRSPEGLTFDWVNRVLYWTDSQM------DTISMA   71 (232)
Q Consensus         9 ~~~~~ly~~d~~~~~~i~~~~~~g~----~~~~~~~-------~~~~~p~gl~~d~~~~~ly~~d~~~------~~I~~~   71 (232)
                      .....||++....+ +|+.++....    ...+++.       .+...|.++.+-+. + ||++...+      +.|.++
T Consensus        93 ~~r~~l~v~~l~s~-~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd-G-i~Vs~~g~~~g~~~g~v~vl  169 (462)
T 2ece_A           93 IERRFLIVPGLRSS-RIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD-A-IYISALGNEEGEGPGGILML  169 (462)
T ss_dssp             CCSCEEEEEBTTTC-CEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS-C-EEEEEEEETTSCSCCEEEEE
T ss_pred             ccCCEEEEccCCCC-eEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC-e-EEEEcCCCcCCCCCCeEEEE
Confidence            56889999999999 9999998633    2223341       24457888888874 4 99876554      689999


Q ss_pred             eCCCCCCEEEEe-CCC--CCceEEEEeCCCCeEEEEEcC----------------CCCCcEEEEeCCCCCcEEEEEcC-C
Q psy5751          72 NLNDDQPKVIVS-KDL--VNPRGIVVHPYYRKLFWSDWN----------------RSGPKIEWSNLDGTDREIFLKAA-D  131 (232)
Q Consensus        72 ~~~g~~~~~~~~-~~~--~~p~~iavd~~~~~ly~~d~~----------------~~~~~I~~~~~~g~~~~~~~~~~-~  131 (232)
                      |..+........ ...  .-+.++.+.|..+.+|.++|+                ....+|...+++.......+... .
T Consensus       170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~  249 (462)
T 2ece_A          170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE  249 (462)
T ss_dssp             CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred             ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence            988766544443 111  224457778888889888864                22578999999864222212211 0


Q ss_pred             CCCcceEEE--eCCCCEEEEEEC-----CCCcEEEEecCCCceE---EE--ec-----C-----------CCceEEEEE-
Q psy5751         132 LKLPNSLAV--DFRTDELCWVDA-----DSKSLECMTIRNRVRR---KV--YS-----N-----------CTYPFGLSI-  182 (232)
Q Consensus       132 ~~~p~~l~~--d~~~~~Ly~~d~-----~~~~i~~~~~~g~~~~---~~--~~-----~-----------~~~p~gla~-  182 (232)
                      ...|..|.+  ++++..+|++..     -.+.|+.+..+++.-+   ++  ..     .           ...|.+|.+ 
T Consensus       250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS  329 (462)
T 2ece_A          250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS  329 (462)
T ss_dssp             EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred             CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence            235777767  999999999988     7888888777653211   11  01     0           245778887 


Q ss_pred             -ECCEEEEEeCCCCcEEEEeCC-CCCcceEEe-ccCCc-------------ceeEEEEEEcCC
Q psy5751         183 -TDEKYYWTDWKTNRIESANKE-GERAPSIAL-DMMGT-------------TYMYGIAAVPSS  229 (232)
Q Consensus       183 -~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~-~~~~~-------------~~p~gi~~~~~~  229 (232)
                       ++.+||+++++.+.|..++.. ....+.+.. +..+.             ..|.++++.+++
T Consensus       330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG  392 (462)
T 2ece_A          330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG  392 (462)
T ss_dssp             TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS
T ss_pred             CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC
Confidence             477999999999999999864 444443322 22222             258888887765

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=99.02  E-value=3.3e-07  Score=73.41  Aligned_cols=183  Identities=10%  Similarity=0.064  Sum_probs=117.2

Q ss_pred             EEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCC-------eEEEEeCC--CCeEEEEeCC--CCCCEEE--
Q psy5751          15 YYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNR-------VLYWTDSQ--MDTISMANLN--DDQPKVI--   81 (232)
Q Consensus        15 y~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~-------~ly~~d~~--~~~I~~~~~~--g~~~~~~--   81 (232)
                      +++-.... .|+.++++|...+.+  + ...++++.+.+.-.       .+|.++..  .++|..++++  ......+  
T Consensus        43 ii~t~k~~-gL~Vydl~G~~l~~~--~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~  118 (355)
T 3amr_A           43 LITTNKKS-GLVVYSLDGKMLHSY--N-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD  118 (355)
T ss_dssp             EEEEETTT-EEEEEETTSCEEEEE--C-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred             EEEEcCCC-CEEEEcCCCcEEEEc--c-CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence            44333334 699999988776443  2 25678887766222       57999988  8888888665  3322223  


Q ss_pred             ----EeCCCCCceEEEE--eCCCCeEEEEEcCCCCCcEEEEeC----CCCC-cEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751          82 ----VSKDLVNPRGIVV--HPYYRKLFWSDWNRSGPKIEWSNL----DGTD-REIFLKAADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        82 ----~~~~~~~p~~iav--d~~~~~ly~~d~~~~~~~I~~~~~----~g~~-~~~~~~~~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                          +...+..|.|+++  ++..+.+|..-.++ .+++..+.+    +|.. .+.+-....-.+|.|+++|+..++||++
T Consensus       119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~  197 (355)
T 3amr_A          119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIA  197 (355)
T ss_dssp             TTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred             cccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEe
Confidence                1234578999999  87667544433332 356766554    2211 1222121224589999999999999999


Q ss_pred             ECCCCcEEEEecC--CCc-eEEEe----cCC-CceEEEEEE-C----CEEEEEeCCCCcEEEEeCC
Q psy5751         151 DADSKSLECMTIR--NRV-RRKVY----SNC-TYPFGLSIT-D----EKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       151 d~~~~~i~~~~~~--g~~-~~~~~----~~~-~~p~gla~~-~----~~ly~td~~~~~i~~~~~~  203 (232)
                      +...+ ||+++.+  +.. .+.+.    ..+ ..+.||+++ .    ++|++++-+++....++..
T Consensus       198 eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          198 EEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             ETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             cccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence            99865 9999955  322 33332    123 368999985 2    5899999888777777765

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.00  E-value=4.4e-08  Score=79.79  Aligned_cols=207  Identities=8%  Similarity=-0.092  Sum_probs=130.5

Q ss_pred             CCCEEEEEEcCCC--C-cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCCC
Q psy5751          10 VEGQVYYSSVADK--S-SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDDQ   77 (232)
Q Consensus        10 ~~~~ly~~d~~~~--~-~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~~   77 (232)
                      ...++|++|...+  . .|..++.+.......+..+ ..| ++++++.++.||+++.         ..+.|.++|+....
T Consensus        30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~  107 (368)
T 1mda_H           30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL  107 (368)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred             CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence            3478999998765  2 5778888876654445444 357 9999999999999983         35789999998876


Q ss_pred             CEEEEe-C------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEE--EeCCCCCcEEE----------------------
Q psy5751          78 PKVIVS-K------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW--SNLDGTDREIF----------------------  126 (232)
Q Consensus        78 ~~~~~~-~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~--~~~~g~~~~~~----------------------  126 (232)
                      ....+. .      ....|.+++++|.+++||+++... ...+..  +++..  ...+                      
T Consensus       108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~-~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~d  184 (368)
T 1mda_H          108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS-SAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCP  184 (368)
T ss_dssp             EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS-SCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCT
T ss_pred             EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC-CCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCC
Confidence            543332 1      135799999999999999998641 233444  33322  1111                      


Q ss_pred             -----EEcCC------------------CCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec----------C
Q psy5751         127 -----LKAAD------------------LKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS----------N  173 (232)
Q Consensus       127 -----~~~~~------------------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----------~  173 (232)
                           +....                  -..|.  + .+..+.+||+..  +.+..++..+...+.+..          .
T Consensus       185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~  259 (368)
T 1mda_H          185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKAD  259 (368)
T ss_dssp             TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred             CCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEecccccccc
Confidence                 11000                  01122  2 444567777766  788888887654443321          1


Q ss_pred             CCceEE---EEE--ECCEEEEEeC---C-----CCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         174 CTYPFG---LSI--TDEKYYWTDW---K-----TNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       174 ~~~p~g---la~--~~~~ly~td~---~-----~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      ...|.|   +++  +++++|++..   +     ...+..++... +....+..    ...|.||++.+++-
T Consensus       260 ~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~~s~Dg~  326 (368)
T 1mda_H          260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAIIAAQDGA  326 (368)
T ss_dssp             TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEEECCSSS
T ss_pred             ccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEEECCCCC
Confidence            223555   666  4689999865   3     34566888764 33334433    33799999987753

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=99.00  E-value=1.3e-06  Score=70.91  Aligned_cols=224  Identities=8%  Similarity=0.046  Sum_probs=149.9

Q ss_pred             CeEEEEEeCCCCEEEEEEcC--CC--CcEEEEEcCC------CceeEE-E-------eCCCCCccEEEEeecCCeEEEEe
Q psy5751           1 MLIGITVDCVEGQVYYSSVA--DK--SSIKRAHLDG------KNVEDV-I-------TTNIRSPEGLTFDWVNRVLYWTD   62 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~--~~--~~i~~~~~~g------~~~~~~-~-------~~~~~~p~gl~~d~~~~~ly~~d   62 (232)
                      +|.++++|..++++|++=-.  .+  .++..+..++      ... ++ .       +..+..+.++.+|. .++|++.|
T Consensus        27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p-~ll~PYP~w~~~~~lvsV~~v~iD~-~~rLWVLD  104 (381)
T 3q6k_A           27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHS-PLLNKFSGHKTGKELTSIYQPVIDD-CRRLWVVD  104 (381)
T ss_dssp             CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSS-CCBEECTTCSSSCSSSCEEEEEECT-TCEEEEEE
T ss_pred             ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCc-ccccCCCCCccccceEEeeEEEEcC-CCcEEEEe
Confidence            47899997558999998532  22  2577666542      111 12 1       23467889999998 68899999


Q ss_pred             CCC---------------CeEEEEeCCCC--CCEEEEe--C----CCCCceEEEEe-C--C----CCeEEEEEcCCCCCc
Q psy5751          63 SQM---------------DTISMANLNDD--QPKVIVS--K----DLVNPRGIVVH-P--Y----YRKLFWSDWNRSGPK  112 (232)
Q Consensus        63 ~~~---------------~~I~~~~~~g~--~~~~~~~--~----~~~~p~~iavd-~--~----~~~ly~~d~~~~~~~  112 (232)
                      .+.               -+|...|+...  .......  .    ......+++|| .  .    ++..|++|.+  .+-
T Consensus       105 tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~--~~g  182 (381)
T 3q6k_A          105 IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL--RGA  182 (381)
T ss_dssp             CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT--TTE
T ss_pred             CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC--CCc
Confidence            772               15888898887  4322222  1    22345799999 2  2    6899999986  456


Q ss_pred             EEEEeCCCCCcEEEEEcC---C--------------CCCcceEEEeCC----CCEEEEEECCCCcEEEEecC-------C
Q psy5751         113 IEWSNLDGTDREIFLKAA---D--------------LKLPNSLAVDFR----TDELCWVDADSKSLECMTIR-------N  164 (232)
Q Consensus       113 I~~~~~~g~~~~~~~~~~---~--------------~~~p~~l~~d~~----~~~Ly~~d~~~~~i~~~~~~-------g  164 (232)
                      |.++++......-+.+..   +              .....||++++.    ++.|||......+++++..+       .
T Consensus       183 LIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~  262 (381)
T 3q6k_A          183 LFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGK  262 (381)
T ss_dssp             EEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCC
T ss_pred             EEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchh
Confidence            777887655433333210   0              125579999997    78999999988899999742       1


Q ss_pred             CceEEEecCC--CceEEEEEE--CCEEEEEeCCCCcEEEEeCCC-----CCcceEEeccCCcceeEEEEEEcCC
Q psy5751         165 RVRRKVYSNC--TYPFGLSIT--DEKYYWTDWKTNRIESANKEG-----ERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       165 ~~~~~~~~~~--~~p~gla~~--~~~ly~td~~~~~i~~~~~~g-----~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ...+.+.+..  ....+++++  .|.||+++...+.|.+.++++     +...++.... ....|.++++..++
T Consensus       263 ~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g  335 (381)
T 3q6k_A          263 LNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKG  335 (381)
T ss_dssp             CCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTS
T ss_pred             hceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCC
Confidence            2334444443  334466775  689999999999999999987     3345555444 67789999987543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.00  E-value=7e-07  Score=73.82  Aligned_cols=181  Identities=8%  Similarity=0.009  Sum_probs=127.5

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKL  101 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~l  101 (232)
                      .|+.++++|.....+... ...+.++++.+.++.|+++....  ..|+..++.+.....+.. .......++++|.+..|
T Consensus       160 ~i~i~d~~g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~-~~~~~~~~~~spdg~~l  237 (415)
T 2hqs_A          160 ELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-FPRHNGAPAFSPDGSKL  237 (415)
T ss_dssp             EEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-CSSCEEEEEECTTSSEE
T ss_pred             eEEEEcCCCCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec-CCCcccCEEEcCCCCEE
Confidence            799999998765555443 35788899999888888887653  589999998776655443 33467899999977778


Q ss_pred             EEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEEEEecCCCceEEEecCCCceEE
Q psy5751         102 FWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLECMTIRNRVRRKVYSNCTYPFG  179 (232)
Q Consensus       102 y~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~~~~~~g~~~~~~~~~~~~p~g  179 (232)
                      +++........|+..++.+.....+...  ......+++++++..|+++....  .+|+.++++++..+.+.........
T Consensus       238 a~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~  315 (415)
T 2hqs_A          238 AFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQD  315 (415)
T ss_dssp             EEEECTTSSCEEEEEETTTCCEEECCCC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEE
T ss_pred             EEEEecCCCceEEEEECCCCCEEeCcCC--CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccC
Confidence            8776543456799999987665443322  34567899999988888876433  3899999988765554333344556


Q ss_pred             EEEE--CCEEEEEeCC--CCcEEEEeCCCCCcc
Q psy5751         180 LSIT--DEKYYWTDWK--TNRIESANKEGERAP  208 (232)
Q Consensus       180 la~~--~~~ly~td~~--~~~i~~~~~~g~~~~  208 (232)
                      +++.  +..|+++...  ...|..++..+...+
T Consensus       316 ~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~  348 (415)
T 2hqs_A          316 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ  348 (415)
T ss_dssp             EEECTTSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred             eEECCCCCEEEEEECcCCceEEEEEECCCCCEE
Confidence            7773  5577777554  357888888765544

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=99.00  E-value=5.2e-07  Score=75.61  Aligned_cols=222  Identities=12%  Similarity=0.079  Sum_probs=135.4

Q ss_pred             CeEEEEEeCCCC-EEEEEEcCCCCcEEEEEcCCCce-eEE------EeCC-----CCCccEEEEeec---CCeEEEEeCC
Q psy5751           1 MLIGITVDCVEG-QVYYSSVADKSSIKRAHLDGKNV-EDV------ITTN-----IRSPEGLTFDWV---NRVLYWTDSQ   64 (232)
Q Consensus         1 ~~~~i~~d~~~~-~ly~~d~~~~~~i~~~~~~g~~~-~~~------~~~~-----~~~p~gl~~d~~---~~~ly~~d~~   64 (232)
                      +|.+|++.+... +||++... + +|++++.+|... ..+      +..+     .....||++++.   ++.||++...
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~-G-~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~   92 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKE-G-YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT   92 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETT-T-EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred             CceEEEECCCCCeEEEEEeCC-c-eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence            488999998653 79999864 4 799887766421 111      1111     246788999974   5789987542


Q ss_pred             C------------CeEEEEeCCCC--------CCEEEEe----CCCCCceEEEEeCCCCeEEEEEcCCC-----------
Q psy5751          65 M------------DTISMANLNDD--------QPKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNRS-----------  109 (232)
Q Consensus        65 ~------------~~I~~~~~~g~--------~~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~~-----------  109 (232)
                      .            .+|.+..++..        ..++++.    ........|+++| +|.||++-....           
T Consensus        93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~  171 (463)
T 2wg3_C           93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDG  171 (463)
T ss_dssp             CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTT
T ss_pred             CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccC
Confidence            1            37888776531        1345554    2234457899998 789999954321           


Q ss_pred             ----CCcEEEEeCCCC--------------------CcEEEEEcCCCCCcceEEEeCCCC------EEEEEEC-CC----
Q psy5751         110 ----GPKIEWSNLDGT--------------------DREIFLKAADLKLPNSLAVDFRTD------ELCWVDA-DS----  154 (232)
Q Consensus       110 ----~~~I~~~~~~g~--------------------~~~~~~~~~~~~~p~~l~~d~~~~------~Ly~~d~-~~----  154 (232)
                          .++|.|++.+|.                    ..++....  +.+|.++++|+..+      ++|.+|. +.    
T Consensus       172 ~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G--~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~  249 (463)
T 2wg3_C          172 LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHG--LHDPGRCAVDRHPTDININLTILCSDSNGKNRSS  249 (463)
T ss_dssp             CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEEC--CSSCCBEEEESSCSSTTCSEEEEEECC------C
T ss_pred             cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEEC--CCCcceEEECCCCCCcccceEEEecccCCCCCCC
Confidence                578999999984                    23455555  88999999999744      7888886 21    


Q ss_pred             CcEEEEecCCCc----eEEE-ec--CCCceEEEEEEC--------CEEEEEeCCCCcEEEEeCCCC--CcceEEec-c--
Q psy5751         155 KSLECMTIRNRV----RRKV-YS--NCTYPFGLSITD--------EKYYWTDWKTNRIESANKEGE--RAPSIALD-M--  214 (232)
Q Consensus       155 ~~i~~~~~~g~~----~~~~-~~--~~~~p~gla~~~--------~~ly~td~~~~~i~~~~~~g~--~~~~i~~~-~--  214 (232)
                      .+|..+.. |.+    ..++ ..  ....|.|++++.        +.++++++. ++|.++..+..  ..+...+. .  
T Consensus       250 ~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~  327 (463)
T 2wg3_C          250 ARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTS  327 (463)
T ss_dssp             EEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEET
T ss_pred             CeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCc
Confidence            24444422 221    1111 11  125788999853        348999997 77999987632  22211211 0  


Q ss_pred             -----CCcceeEEEEEEcCC
Q psy5751         215 -----MGTTYMYGIAAVPSS  229 (232)
Q Consensus       215 -----~~~~~p~gi~~~~~~  229 (232)
                           .....|.+|++.+++
T Consensus       328 ~~~~~~~~~r~~~v~~~pdG  347 (463)
T 2wg3_C          328 GSCRGYFSGHILGFGEDELG  347 (463)
T ss_dssp             TSSCSCCCSEEEEEEECTTC
T ss_pred             ccccccccCcceEEEECCCC
Confidence                 113578888887764

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.95  E-value=3.6e-07  Score=74.61  Aligned_cols=214  Identities=10%  Similarity=0.032  Sum_probs=126.0

Q ss_pred             eEEEEEeCCCCEEEEEEcC---------CCCcEEEEEcCCCcee-EEEeCC------CCCccEEEEeecCCeEEEEeCC-
Q psy5751           2 LIGITVDCVEGQVYYSSVA---------DKSSIKRAHLDGKNVE-DVITTN------IRSPEGLTFDWVNRVLYWTDSQ-   64 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~---------~~~~i~~~~~~g~~~~-~~~~~~------~~~p~gl~~d~~~~~ly~~d~~-   64 (232)
                      |. +.+++..++||+++..         .+ .|.+++....... ++....      ...|.++++++.++.||+++.. 
T Consensus        81 P~-va~spDG~~lyVan~~~~r~~~G~~~~-~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~  158 (386)
T 3sjl_D           81 PN-PVVADDGSFIAHASTVFSRIARGERTD-YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP  158 (386)
T ss_dssp             CE-EEECTTSSCEEEEEEEEEETTEEEEEE-EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred             Cc-EEECCCCCEEEEEcccccccccCCCCC-EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence            54 8999999999999842         34 6889998876543 332221      2479999999999999999875 


Q ss_pred             CCeEEEEeCCCCCCEEEEeCC---CCCceE----EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcce
Q psy5751          65 MDTISMANLNDDQPKVIVSKD---LVNPRG----IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNS  137 (232)
Q Consensus        65 ~~~I~~~~~~g~~~~~~~~~~---~~~p~~----iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~  137 (232)
                      .+.|.++|+........+...   ...|.+    +++.+ +|.+.+.+... .+++.....      ..+........+.
T Consensus       159 ~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~-DG~~~~v~~~~-~g~v~~~~~------~~~~~~~~~~~~~  230 (386)
T 3sjl_D          159 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCR-DGSLAKVAFGT-EGTPEITHT------EVFHPEDEFLINH  230 (386)
T ss_dssp             SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET-TSCEEEEECCS-SSCCEEEEC------CCCSCTTSCBCSC
T ss_pred             CCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECC-CCCEEEEECCC-CCeEEEeec------ceecccccccccc
Confidence            689999999876544333311   112322    25555 33333333321 122211110      0000000111123


Q ss_pred             EEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec----------CCCceEE---EEE--ECCEEEEEeC---------C
Q psy5751         138 LAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS----------NCTYPFG---LSI--TDEKYYWTDW---------K  193 (232)
Q Consensus       138 l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----------~~~~p~g---la~--~~~~ly~td~---------~  193 (232)
                      .+++...++++|... .++|+.+++.+...+.+..          ..-.|.|   +++  +.++||++..         .
T Consensus       231 ~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~  309 (386)
T 3sjl_D          231 PAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA  309 (386)
T ss_dssp             CEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred             ceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence            467765677766533 6789999998776543321          0111322   455  4789999864         2


Q ss_pred             CCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         194 TNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       194 ~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      .++|..++..+ +..+.+.+    ...|.+|++-.++-
T Consensus       310 ~~~V~viD~~t~kv~~~i~v----g~~~~~lavs~D~~  343 (386)
T 3sjl_D          310 SRFVVVLDAKTGERLAKFEM----GHEIDSINVSQDEK  343 (386)
T ss_dssp             EEEEEEEETTTCCEEEEEEE----EEEECEEEECSSSS
T ss_pred             CCEEEEEECCCCeEEEEEEC----CCCcceEEECCCCC
Confidence            36799999874 44445543    23788999987764

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.94  E-value=1.1e-07  Score=79.67  Aligned_cols=190  Identities=12%  Similarity=0.084  Sum_probs=121.2

Q ss_pred             EEEeCCCCCccEEEEeecCC-eEEEEeCCCCeEEEEeCCCCC-CEEEEe------CC-----CCCceEEEEeCC---CCe
Q psy5751          37 DVITTNIRSPEGLTFDWVNR-VLYWTDSQMDTISMANLNDDQ-PKVIVS------KD-----LVNPRGIVVHPY---YRK  100 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~-~ly~~d~~~~~I~~~~~~g~~-~~~~~~------~~-----~~~p~~iavd~~---~~~  100 (232)
                      +++..++..|.+|++.+.+. +||+++.. ++|++++.+|.. ...+..      ..     ...+.+||++|.   ++.
T Consensus         7 ~~va~gL~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~   85 (463)
T 2wg3_C            7 QEVVSGLRQPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK   85 (463)
T ss_dssp             EEEEEEESSEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred             EEeccCCCCceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence            44556789999999998664 79999875 899999877653 112221      11     346789999984   589


Q ss_pred             EEEEEcCCCC----------CcEEEEeCCCC--------CcEEEEEcC---CCCCcceEEEeCCCCEEEEEEC-------
Q psy5751         101 LFWSDWNRSG----------PKIEWSNLDGT--------DREIFLKAA---DLKLPNSLAVDFRTDELCWVDA-------  152 (232)
Q Consensus       101 ly~~d~~~~~----------~~I~~~~~~g~--------~~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~-------  152 (232)
                      ||++......          .+|.|+.+...        ..++++...   ..+.-..|+|+++ ++||++-.       
T Consensus        86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD-G~LYv~~Gd~~~~~~  164 (463)
T 2wg3_C           86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD-GFLYIILGDGMITLD  164 (463)
T ss_dssp             EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT-SCEEEEECCTTCCHH
T ss_pred             EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC-CcEEEEeCCCCCCCC
Confidence            9988642111          37888777531        234444321   2455678999997 79999932       


Q ss_pred             ----------CCCcEEEEecCCC--------------------ceEEEecCCCceEEEEEEC------C--EEEEEeC-C
Q psy5751         153 ----------DSKSLECMTIRNR--------------------VRRKVYSNCTYPFGLSITD------E--KYYWTDW-K  193 (232)
Q Consensus       153 ----------~~~~i~~~~~~g~--------------------~~~~~~~~~~~p~gla~~~------~--~ly~td~-~  193 (232)
                                ..++|.|+++||.                    ..++++..+..|.|++++.      +  ++|.+|. +
T Consensus       165 ~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G  244 (463)
T 2wg3_C          165 DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNG  244 (463)
T ss_dssp             HHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC--
T ss_pred             ccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCC
Confidence                      1468999999984                    2466778999999999974      3  7888886 2


Q ss_pred             ----CCcEEEEeCC---CCCcceEEeccCCcceeEEEEEEcC
Q psy5751         194 ----TNRIESANKE---GERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       194 ----~~~i~~~~~~---g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                          ..+|..+.+.   |-..-.+.++......|.|++++..
T Consensus       245 ~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G  286 (463)
T 2wg3_C          245 KNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRG  286 (463)
T ss_dssp             ----CEEEEEEC----CCSCCCCEECCC----CEEEEEECCC
T ss_pred             CCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeC
Confidence                1345555332   2111123322111147899988754

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.92  E-value=1.4e-07  Score=80.46  Aligned_cols=221  Identities=12%  Similarity=0.040  Sum_probs=147.9

Q ss_pred             eEEEEE-e-CCCCEEEEEE-----------------cCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEe
Q psy5751           2 LIGITV-D-CVEGQVYYSS-----------------VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD   62 (232)
Q Consensus         2 ~~~i~~-d-~~~~~ly~~d-----------------~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d   62 (232)
                      |+++.+ . +.++.+|+++                 ...+ .+..++.+.......+..+ ..|.++++++.++.+|++.
T Consensus       136 phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~-~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~  213 (595)
T 1fwx_A          136 IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN-VFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTS  213 (595)
T ss_dssp             EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE-EEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEE
T ss_pred             CcceeeeecCCCcEEEEecccccccCCCCcccccccccCc-eEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEe
Confidence            678888 4 7899999985                 2222 5777888865443333332 2799999999999999999


Q ss_pred             CCCC-------------------------------------eEEEEeCCC--CCC-EEEEeCCCCCceEEEEeCCCCeEE
Q psy5751          63 SQMD-------------------------------------TISMANLND--DQP-KVIVSKDLVNPRGIVVHPYYRKLF  102 (232)
Q Consensus        63 ~~~~-------------------------------------~I~~~~~~g--~~~-~~~~~~~~~~p~~iavd~~~~~ly  102 (232)
                      +.++                                     .+.++|...  ... ...+. ....|.++.++|.++++|
T Consensus       214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~  292 (595)
T 1fwx_A          214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLC  292 (595)
T ss_dssp             SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEE
T ss_pred             cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEE
Confidence            7652                                     355566554  111 11222 235899999999999999


Q ss_pred             EEEcCCCCCcEEEEeCCCCC----------cEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC-------C
Q psy5751         103 WSDWNRSGPKIEWSNLDGTD----------REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN-------R  165 (232)
Q Consensus       103 ~~d~~~~~~~I~~~~~~g~~----------~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-------~  165 (232)
                      +++..  ..+|..++.+...          ..+......-..|.+++||+++ ++|++..-.+.|..++++.       .
T Consensus       293 V~~~~--s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~  369 (595)
T 1fwx_A          293 VAGKL--SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGE  369 (595)
T ss_dssp             EECTT--SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTC
T ss_pred             EeCCC--CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhccc
Confidence            99976  5678888877331          1122222225689999999986 9999999999999999875       1


Q ss_pred             c-eEEEec--CCCce------EEEEE--ECCEEEEEeCCC-CcE-----------EEEeCCCCCcceEEeccCCcceeEE
Q psy5751         166 V-RRKVYS--NCTYP------FGLSI--TDEKYYWTDWKT-NRI-----------ESANKEGERAPSIALDMMGTTYMYG  222 (232)
Q Consensus       166 ~-~~~~~~--~~~~p------~gla~--~~~~ly~td~~~-~~i-----------~~~~~~g~~~~~i~~~~~~~~~p~g  222 (232)
                      + .+++..  .--.|      .|+++  ++.+||.++-.+ .++           +.++-.|...+.+.-..- -.+|+.
T Consensus       370 ~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~-~~ePh~  448 (595)
T 1fwx_A          370 KVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPT-FAEPHD  448 (595)
T ss_dssp             SCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEE-SSCCCC
T ss_pred             ccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcC-CCCCCc
Confidence            1 222211  11122      33343  578999999877 666           777777766665543222 468888


Q ss_pred             EEEEcCC
Q psy5751         223 IAAVPSS  229 (232)
Q Consensus       223 i~~~~~~  229 (232)
                      .++++.+
T Consensus       449 ~~i~~~~  455 (595)
T 1fwx_A          449 AIAVHPS  455 (595)
T ss_dssp             EEEECTT
T ss_pred             eEEccHH
Confidence            8888764

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.91  E-value=8e-07  Score=73.53  Aligned_cols=224  Identities=11%  Similarity=0.003  Sum_probs=137.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCC-----CcEEEEEcCCCceeEEEeCC-C--CCccEEEEeecCCeEEEEe-----------
Q psy5751           2 LIGITVDCVEGQVYYSSVADK-----SSIKRAHLDGKNVEDVITTN-I--RSPEGLTFDWVNRVLYWTD-----------   62 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~-----~~i~~~~~~g~~~~~~~~~~-~--~~p~gl~~d~~~~~ly~~d-----------   62 (232)
                      |+.+...+ ++ ||++..++.     +.|..++............+ .  .-+.++-+.+..+.+|.++           
T Consensus       140 Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~  217 (462)
T 2ece_A          140 LHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL  217 (462)
T ss_dssp             EEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred             ccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence            55666776 44 999877651     27998888866544444322 1  1234455677677777776           


Q ss_pred             -------CCCCeEEEEeCCCCCCEEEEeC--CCCCceEEEE--eCCCCeEEEEEc-----CCCCCcEEEEeCCCCCc---
Q psy5751          63 -------SQMDTISMANLNDDQPKVIVSK--DLVNPRGIVV--HPYYRKLFWSDW-----NRSGPKIEWSNLDGTDR---  123 (232)
Q Consensus        63 -------~~~~~I~~~~~~g~~~~~~~~~--~~~~p~~iav--d~~~~~ly~~d~-----~~~~~~I~~~~~~g~~~---  123 (232)
                             ...++|.+++++.......+..  ....|+.+++  +|....+|++..     .  .+.|.+...++...   
T Consensus       218 ~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L--ss~V~v~~~d~g~~~~~  295 (462)
T 2ece_A          218 KLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDL--SSSIWLWFYEDGKWNAE  295 (462)
T ss_dssp             CTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTC--CEEEEEEEEETTEEEEE
T ss_pred             chhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCC--CceEEEEEecCCceeEE
Confidence                   2368999999987533333332  2246788776  988889999875     3  34576655544211   


Q ss_pred             EEE-EEcC----C-----------CCCcceEEEeCCCCEEEEEECCCCcEEEEecC-CCceEEEec---C-C--------
Q psy5751         124 EIF-LKAA----D-----------LKLPNSLAVDFRTDELCWVDADSKSLECMTIR-NRVRRKVYS---N-C--------  174 (232)
Q Consensus       124 ~~~-~~~~----~-----------~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~-g~~~~~~~~---~-~--------  174 (232)
                      +++ +...    .           ...|.+|.+++++++||+++.+.+.|..++++ ..+.+.+..   . .        
T Consensus       296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~  375 (462)
T 2ece_A          296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPA  375 (462)
T ss_dssp             EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTT
T ss_pred             EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccc
Confidence            111 1100    0           14689999999999999999999999999985 333333321   2 1        


Q ss_pred             -----CceEEEEE--ECCEEEEEeC-------------CCCcEEEE--eCCCCCcceEE--eccCCcceeEEEEEEcCCC
Q psy5751         175 -----TYPFGLSI--TDEKYYWTDW-------------KTNRIESA--NKEGERAPSIA--LDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       175 -----~~p~gla~--~~~~ly~td~-------------~~~~i~~~--~~~g~~~~~i~--~~~~~~~~p~gi~~~~~~~  230 (232)
                           ..|.++++  ++.+||+|+.             .+..+.++  ++.++ ++.-.  +..++-..|+.+-.--..|
T Consensus       376 G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~~~~~f~vdf~~~~~h~~r~~ggd~  454 (462)
T 2ece_A          376 GHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LEIDKEFFVDFGEARSHQVRLSGGDA  454 (462)
T ss_dssp             SCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EEEEEEEEEECTTSEEEEEEETTCCT
T ss_pred             cccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ceeCCCEEeecccCcceeeecCCCCc
Confidence                 15999999  4779999993             34566645  55544 44111  1122224566666555555

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.90  E-value=4.8e-07  Score=73.46  Aligned_cols=107  Identities=7%  Similarity=0.040  Sum_probs=75.5

Q ss_pred             CCEEEEEEcC-----CCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC---------CCCeEEEEeCCCC
Q psy5751          11 EGQVYYSSVA-----DKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS---------QMDTISMANLNDD   76 (232)
Q Consensus        11 ~~~ly~~d~~-----~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~---------~~~~I~~~~~~g~   76 (232)
                      ..++|++|..     ++ .|++++.........+..+ ..| ++++++.++.||+++.         ..+.|.++|....
T Consensus        15 ~~~~yv~~~~~~~~~d~-~v~v~D~~t~~~~~~i~~g-~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~   91 (361)
T 2oiz_A           15 ENRIYVMDSVFMHLTES-RVHVYDYTNGKFLGMVPTA-FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL   91 (361)
T ss_dssp             GGEEEEEECCGGGGGGC-EEEEEETTTCCEEEEEECC-EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred             CCEEEEECCCCCccccC-eEEEEECCCCeEEEEecCC-CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence            4689999964     34 7899997755443344443 467 9999999999999974         2356999998765


Q ss_pred             CCEEEEe-C-----CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          77 QPKVIVS-K-----DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        77 ~~~~~~~-~-----~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      .....+. .     ....|.+++++|.+++||++.... .+.|..++++..
T Consensus        92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~-~~~v~v~d~~~~  141 (361)
T 2oiz_A           92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP-ATSIGIVDVAKG  141 (361)
T ss_dssp             CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS-SEEEEEEETTTT
T ss_pred             cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC-CCeEEEEECCCC
Confidence            4332222 1     235799999999899999998541 356888877654

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=98.86  E-value=3e-06  Score=65.39  Aligned_cols=179  Identities=12%  Similarity=0.038  Sum_probs=123.6

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCEEEEeCC-CCCceEEEEeCCCCeE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPKVIVSKD-LVNPRGIVVHPYYRKL  101 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~-~~~p~~iavd~~~~~l  101 (232)
                      .|+.+++.+.....+... ...+.++++.+.++.|+++.  .+.|++.++++ .....+.... ...+..++++|.+..|
T Consensus        23 ~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l   99 (297)
T 2ojh_A           23 SIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALY   99 (297)
T ss_dssp             EEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEE
T ss_pred             eEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEE
Confidence            788888887665444443 35788999999888888775  46899999988 6665554422 2456789999977788


Q ss_pred             EEEEcCC-CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEEEEecCCCceEEEecCCCceE
Q psy5751         102 FWSDWNR-SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLECMTIRNRVRRKVYSNCTYPF  178 (232)
Q Consensus       102 y~~d~~~-~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~~~~~~g~~~~~~~~~~~~p~  178 (232)
                      +++.... ...+|+.+++++.....+...   .....+++++++..|+++....+  +|+.++.++.....+......+.
T Consensus       100 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  176 (297)
T 2ojh_A          100 AISDKVEFGKSAIYLLPSTGGTPRLMTKN---LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRND  176 (297)
T ss_dssp             EEEECTTTSSCEEEEEETTCCCCEECCSS---SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEE
T ss_pred             EEEEeCCCCcceEEEEECCCCceEEeecC---CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccc
Confidence            8777332 256899999887765544332   34778899999888887655444  67888787776655555555667


Q ss_pred             EEEEE--CCEEEEEeC--CCCcEEEEeCCCCCcc
Q psy5751         179 GLSIT--DEKYYWTDW--KTNRIESANKEGERAP  208 (232)
Q Consensus       179 gla~~--~~~ly~td~--~~~~i~~~~~~g~~~~  208 (232)
                      .+++.  +..|+++..  +...|+.++..+...+
T Consensus       177 ~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~  210 (297)
T 2ojh_A          177 GPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE  210 (297)
T ss_dssp             EEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE
T ss_pred             cceECCCCCEEEEEecCCCCccEEEECCCCCCcE
Confidence            88884  456777643  4457777776665544

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.85  E-value=7.3e-07  Score=77.74  Aligned_cols=207  Identities=9%  Similarity=-0.026  Sum_probs=126.7

Q ss_pred             EEEEEeCCCCEEEEEEcCC-------C-CcEEEEEcCC------CceeEEEeCCCCCccEEEEeecCCeEEEEeCCC---
Q psy5751           3 IGITVDCVEGQVYYSSVAD-------K-SSIKRAHLDG------KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM---   65 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~-------~-~~i~~~~~~g------~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~---   65 (232)
                      .+++|++..+.|+++....       . ..|+++++++      .....+.........++++.+.++.|+++....   
T Consensus       133 ~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~  212 (662)
T 3azo_A          133 ADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM  212 (662)
T ss_dssp             EEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCC
T ss_pred             cCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCC
Confidence            4788999888998876431       1 2799999998      454333303334566788999889998876432   


Q ss_pred             ----CeEEEEeCCC-C---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCC--
Q psy5751          66 ----DTISMANLND-D---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKL--  134 (232)
Q Consensus        66 ----~~I~~~~~~g-~---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~--  134 (232)
                          ..|+++++++ .   ....+.......+..++.+|.+. +|++....+..+|+++++++...+.+.... ....  
T Consensus       213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~  291 (662)
T 3azo_A          213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPL  291 (662)
T ss_dssp             TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCC
T ss_pred             CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCcc
Confidence                4799999984 3   33444443345678889998555 666654323458999998766554443321 0111  


Q ss_pred             ----cceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEE-EEECCEEEEEeCCC---CcEEEEeCCCCC
Q psy5751         135 ----PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGL-SITDEKYYWTDWKT---NRIESANKEGER  206 (232)
Q Consensus       135 ----p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gl-a~~~~~ly~td~~~---~~i~~~~~~g~~  206 (232)
                          ...+++.+++..+|.+..+..+|+.++.+++..+.+........++ +.+.+.++++-...   ..|+.++..+..
T Consensus       292 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~  371 (662)
T 3azo_A          292 WTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR  371 (662)
T ss_dssp             CSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             ccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence                3467887764444444334457899899877665553333334456 66666665553322   256666665544


Q ss_pred             cceE
Q psy5751         207 APSI  210 (232)
Q Consensus       207 ~~~i  210 (232)
                      .+.+
T Consensus       372 ~~~l  375 (662)
T 3azo_A          372 ARTI  375 (662)
T ss_dssp             EEEE
T ss_pred             eEEe
Confidence            4433

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=98.83  E-value=1.9e-05  Score=62.23  Aligned_cols=214  Identities=9%  Similarity=-0.026  Sum_probs=138.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce--eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV--EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++|++..+.|+.+.. ++ .|...+++....  ...+......+..+++.+.++.|+.+. ..+.|...++.......
T Consensus       101 ~~~~~~~~~~~l~~~~~-d~-~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~  177 (337)
T 1gxr_A          101 RSCKLLPDGCTLIVGGE-AS-TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVR  177 (337)
T ss_dssp             EEEEECTTSSEEEEEES-SS-EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEE
T ss_pred             EEEEEcCCCCEEEEEcC-CC-cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceee
Confidence            47889986666766553 34 788888886552  223333445678899988666666444 55789999988765544


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .+......+..++++|.+..|+.+..   .+.|...++...........  ......+++++++..|+.+ ...+.|...
T Consensus       178 ~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~-~~~~~i~~~  251 (337)
T 1gxr_A          178 QFQGHTDGASCIDISNDGTKLWTGGL---DNTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVG-MESSNVEVL  251 (337)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred             eeecccCceEEEEECCCCCEEEEEec---CCcEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEE-cCCCcEEEE
Confidence            55445567889999986666665553   45688888876544433332  4567899999987777665 456789999


Q ss_pred             ecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +++......+........++++. ++.++++-...+.|...+....... ...  .....+..+++.++
T Consensus       252 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~-~~~--~~~~~v~~~~~s~~  317 (337)
T 1gxr_A          252 HVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQS--KESSSVLSCDISVD  317 (337)
T ss_dssp             ETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-EEE--ECSSCEEEEEECTT
T ss_pred             ECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE-EEe--cCCCcEEEEEECCC
Confidence            99877665554455556788885 4455555555688888887643322 111  22344555655443

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=98.75  E-value=2.6e-05  Score=61.35  Aligned_cols=213  Identities=8%  Similarity=0.043  Sum_probs=133.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce---eEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV---EDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~---~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      .+++|++....|+.+.  ++ .|...+++....   ...+.  .....+..+++.+.++.|+.+. ..+.|...+++...
T Consensus        55 ~~~~~~~~~~~l~~~~--dg-~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~  130 (337)
T 1gxr_A           55 CAVTISNPTRHVYTGG--KG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-EASTLSIWDLAAPT  130 (337)
T ss_dssp             CEEEECSSSSEEEEEC--BS-EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-SSSEEEEEECCCC-
T ss_pred             EEEEEecCCcEEEEcC--CC-eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCC
Confidence            4688888677776665  55 788888875321   12222  2345678899998666666544 55789999998766


Q ss_pred             CE--EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          78 PK--VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        78 ~~--~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      ..  ............++++|.+..|+....   .+.|...++........+... ......+++++++..|+.+ ...+
T Consensus       131 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~-~~dg  205 (337)
T 1gxr_A          131 PRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGH-TDGASCIDISNDGTKLWTG-GLDN  205 (337)
T ss_dssp             -EEEEEEECSSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEE-ETTS
T ss_pred             cceeeecccCCCceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCceeeeeecc-cCceEEEEECCCCCEEEEE-ecCC
Confidence            32  333345556789999986666666653   356888888765433333322 4567899999986666655 4577


Q ss_pred             cEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751         156 SLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      .|...+++................+++. ++..+++-...+.|...+........+.   .....+..+++.+
T Consensus       206 ~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~---~~~~~v~~~~~~~  275 (337)
T 1gxr_A          206 TVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH---LHESCVLSLKFAY  275 (337)
T ss_dssp             EEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEEC---CCSSCEEEEEECT
T ss_pred             cEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEc---CCccceeEEEECC
Confidence            8999998876554444444556677774 3444444444677888887754433221   2233455555543

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=98.73  E-value=4.9e-05  Score=61.97  Aligned_cols=220  Identities=5%  Similarity=-0.064  Sum_probs=138.3

Q ss_pred             eEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCC-------ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC
Q psy5751           2 LIGITVDC-VEGQVYYSSVADKSSIKRAHLDGK-------NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL   73 (232)
Q Consensus         2 ~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~-------~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~   73 (232)
                      ..+++|++ ..+.|+.+. .++ .|...++...       .....+......+..+++.+.++.++++-...+.|...++
T Consensus        84 V~~~~~~p~~~~~l~s~s-~dg-~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~  161 (402)
T 2aq5_A           84 VLDIAWCPHNDNVIASGS-EDC-TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDV  161 (402)
T ss_dssp             EEEEEECTTCTTEEEEEE-TTS-EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEET
T ss_pred             EEEEEeCCCCCCEEEEEe-CCC-eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEEC
Confidence            35788988 455555444 455 7888888754       2223344444678899999866556667667788999998


Q ss_pred             CCCCCEEEE--eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCCCEEEEE
Q psy5751          74 NDDQPKVIV--SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        74 ~g~~~~~~~--~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      ........+  .........++++|....|+.+..   .+.|...++........+ .......+..++++++ +.++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~  237 (402)
T 2aq5_A          162 GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR---DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTT  237 (402)
T ss_dssp             TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEE
T ss_pred             CCCCccEEEecCCCCCceEEEEECCCCCEEEEEec---CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEE
Confidence            876555455  334556789999985556655553   457888888765443333 2211223688999987 555555


Q ss_pred             E---CCCCcEEEEecCCCce--EEE-ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCC--cceEEeccCCccee
Q psy5751         151 D---ADSKSLECMTIRNRVR--RKV-YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGER--APSIALDMMGTTYM  220 (232)
Q Consensus       151 d---~~~~~i~~~~~~g~~~--~~~-~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~--~~~i~~~~~~~~~p  220 (232)
                      -   ...+.|...+++....  ... .........+++.  +..|+++-...+.|...+.....  ...+... ......
T Consensus       238 g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~-~~~~~v  316 (402)
T 2aq5_A          238 GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF-SSKESQ  316 (402)
T ss_dssp             EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE-CCSSCC
T ss_pred             eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc-ccCCcc
Confidence            4   5677898988886443  222 2334456777875  56788887777888888887544  3333221 123445


Q ss_pred             EEEEEEcC
Q psy5751         221 YGIAAVPS  228 (232)
Q Consensus       221 ~gi~~~~~  228 (232)
                      .++++.++
T Consensus       317 ~~~~~sp~  324 (402)
T 2aq5_A          317 RGMGYMPK  324 (402)
T ss_dssp             SEEEECCG
T ss_pred             cceEEecc
Confidence            66665543

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=98.68  E-value=4e-05  Score=65.31  Aligned_cols=214  Identities=13%  Similarity=0.157  Sum_probs=139.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +.++++.+....|..+. .++ .|...+.++.....+. .....+.++++.+.++.|..+ ...+.|...+.++.....+
T Consensus       347 v~~~~~s~~g~~l~~~~-~dg-~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~-~~d~~v~~~~~~~~~~~~~  422 (577)
T 2ymu_A          347 VWGVAFSPDGQTIASAS-DDK-TVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTL  422 (577)
T ss_dssp             EEEEEECTTSSEEEEEE-TTS-EEEEEETTCCEEEEEE-CCSSCEEEEEECTTSSCEEEE-ETTSEEEEECTTCCEEEEE
T ss_pred             EEEEEECCCCCEEEEEe-CCC-EEEEEcCCCCEEEEec-CCCCCeEEEEECCCCCEEEEE-eCCCEEEEEeCCCCEEEEe
Confidence            35788888666665544 344 6888887765543333 334678899999877766544 4457888889877654444


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      . .......+++++|.+..|..+..   .+.|...++++.....+...  -....++++++++..|..+ ...+.|...+
T Consensus       423 ~-~~~~~v~~~~~s~d~~~l~~~~~---d~~v~~w~~~~~~~~~~~~~--~~~v~~~~~spd~~~las~-~~d~~i~iw~  495 (577)
T 2ymu_A          423 T-GHSSSVWGVAFSPDDQTIASASD---DKTVKLWNRNGQLLQTLTGH--SSSVRGVAFSPDGQTIASA-SDDKTVKLWN  495 (577)
T ss_dssp             E-CCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTSCEEEEEECC--SSCEEEEEECTTSCEEEEE-ETTSEEEEEE
T ss_pred             c-CCCCCeEEEEECCCCCEEEEEcC---CCEEEEEECCCCEEEEEcCC--CCCEEEEEEcCCCCEEEEE-eCCCEEEEEc
Confidence            3 34556789999986666655543   35688888877655444332  4567899999986655544 4567788888


Q ss_pred             cCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         162 IRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       162 ~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      .+|...+.+.........+++. ++.+..+-...+.|...+..|+....+.   .+.....+|++-+++
T Consensus       496 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~---~h~~~v~~~~fs~dg  561 (577)
T 2ymu_A          496 RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT---GHSSSVWGVAFSPDG  561 (577)
T ss_dssp             TTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEE---CCSSCEEEEEECTTS
T ss_pred             CCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEc---CCCCCEEEEEEcCCC
Confidence            8876666665445556788884 4555555555678888887766544442   445566778776654

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=98.65  E-value=4.9e-05  Score=61.13  Aligned_cols=196  Identities=10%  Similarity=-0.007  Sum_probs=125.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++..+.|.-+. .++ .|...++........+......+..+++.+.+..++.+-...+.|...|+........+
T Consensus       131 ~~v~~spdg~~l~sgs-~d~-~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~  208 (344)
T 4gqb_B          131 STVSVLSSGTQAVSGS-KDI-CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI  208 (344)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred             EEEEECCCCCEEEEEe-CCC-eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence            4788988666655444 445 68888988655444444445677889998877778878777789999998766554433


Q ss_pred             e--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          83 S--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        83 ~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .  .....+..++.+|.++.++.+-..  .+.|...++........+... ....+.+++++++.++..+-+..+.|...
T Consensus       209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~--dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~~i~vw  285 (344)
T 4gqb_B          209 GCSAPGYLPTSLAWHPQQSEVFVFGDE--NGTVSLVDTKSTSCVLSSAVH-SQCVTGLVFSPHSVPFLASLSEDCSLAVL  285 (344)
T ss_dssp             C----CCCEEEEEECSSCTTEEEEEET--TSEEEEEESCC--CCEEEECC-SSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred             ecceeeccceeeeecCCCCcceEEecc--CCcEEEEECCCCcEEEEEcCC-CCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence            2  233456789999877777776533  456888887654433223322 45668999999866665665667788888


Q ss_pred             ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      +.+..+...+........++++.  +..|+.+-...+.|..-+..
T Consensus       286 d~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~  330 (344)
T 4gqb_B          286 DSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP  330 (344)
T ss_dssp             CTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred             ECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence            88766544333333445677873  44566665555666544443

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.64  E-value=5.2e-05  Score=62.65  Aligned_cols=196  Identities=12%  Similarity=0.041  Sum_probs=131.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----------CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEe
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDG----------KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMAN   72 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----------~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~   72 (232)
                      ..++|.+.++.++++-..++ .|..+++..          ......+...-..+.+|++.+.+..++++....+.|...+
T Consensus       132 ~~l~~~p~~~~~lat~~~dg-~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd  210 (430)
T 2xyi_A          132 NRARYMPQNACVIATKTPSS-DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWD  210 (430)
T ss_dssp             SEEEEETTEEEEEEEECSSS-CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEE
T ss_pred             EEEEECCCCCcEEEEECCCC-cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEe
Confidence            46788886566666665556 788888864          1222233334457888999886664666777778999999


Q ss_pred             CCCCCC-------EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC----CcEEEEEcCCCCCcceEEEe
Q psy5751          73 LNDDQP-------KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT----DREIFLKAADLKLPNSLAVD  141 (232)
Q Consensus        73 ~~g~~~-------~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~----~~~~~~~~~~~~~p~~l~~d  141 (232)
                      +.....       ............+++.+|.++.++.+...  .+.|...++...    ....+ ... -..++.++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~--dg~i~i~d~~~~~~~~~~~~~-~~~-~~~v~~i~~~  286 (430)
T 2xyi_A          211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD--DQKLMIWDTRNNNTSKPSHTV-DAH-TAEVNCLSFN  286 (430)
T ss_dssp             TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCSCSSSCSEEE-ECC-SSCEEEEEEC
T ss_pred             CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC--CCeEEEEECCCCCCCcceeEe-ecC-CCCeEEEEeC
Confidence            876321       12233355567899999867777777654  567888888754    22222 222 4578999999


Q ss_pred             CCCCEEEEEECCCCcEEEEecCCC-c-eEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         142 FRTDELCWVDADSKSLECMTIRNR-V-RRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       142 ~~~~~Ly~~d~~~~~i~~~~~~g~-~-~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      +.+..++++-...+.|...+++.. . ...+.........+++.  +..++.+-...+.|...+..
T Consensus       287 p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~  352 (430)
T 2xyi_A          287 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS  352 (430)
T ss_dssp             SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred             CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence            987778888777888999999863 2 33343344556788884  44677777777778777765

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=98.62  E-value=1e-05  Score=71.33  Aligned_cols=199  Identities=6%  Similarity=-0.000  Sum_probs=129.8

Q ss_pred             eEEEEEeCCCCEEEEEEc-CCC---CcEEEEEcCCCceeEEEeCCCC------------------------CccEEEEee
Q psy5751           2 LIGITVDCVEGQVYYSSV-ADK---SSIKRAHLDGKNVEDVITTNIR------------------------SPEGLTFDW   53 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~-~~~---~~i~~~~~~g~~~~~~~~~~~~------------------------~p~gl~~d~   53 (232)
                      +.+++|.+..+.|+++.. ..+   ..|+.+++++.....+......                        .+.++++.+
T Consensus        39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp  118 (741)
T 2ecf_A           39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP  118 (741)
T ss_dssp             CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred             CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence            467899998888988876 331   2699999987765555532211                        257889999


Q ss_pred             cCCeEEEEeCCCCeEEEEeCCCC---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC
Q psy5751          54 VNRVLYWTDSQMDTISMANLNDD---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA  130 (232)
Q Consensus        54 ~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~  130 (232)
                      .++.|+++..  +.|+++++++.   ....+.. ....+..++++|.++.|.++..    ..|+..++++.....+....
T Consensus       119 Dg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~----~~i~~~d~~~g~~~~~~~~~  191 (741)
T 2ecf_A          119 DAQRLLFPLG--GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG----RNLWVIDLASGRQMQLTADG  191 (741)
T ss_dssp             TSSEEEEEET--TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET----TEEEEEETTTTEEEECCCCC
T ss_pred             CCCEEEEEeC--CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC----CcEEEEecCCCCEEEeccCC
Confidence            8888988876  78999999887   5444333 3356789999998777887763    36999998876544332221


Q ss_pred             C---------------CCCcceEEEeCCCCEEEEEECCC--------------------------------CcEEEEecC
Q psy5751         131 D---------------LKLPNSLAVDFRTDELCWVDADS--------------------------------KSLECMTIR  163 (232)
Q Consensus       131 ~---------------~~~p~~l~~d~~~~~Ly~~d~~~--------------------------------~~i~~~~~~  163 (232)
                      .               ...+.++++++++.+|+++....                                ..|+.++++
T Consensus       192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~  271 (741)
T 2ecf_A          192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA  271 (741)
T ss_dssp             CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred             ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence            0               01257899999988898884322                                167888888


Q ss_pred             C-CceEEEecC---CCceEEEEE-ECCEEEEEeC----CCCcEEEEeCCCCCc
Q psy5751         164 N-RVRRKVYSN---CTYPFGLSI-TDEKYYWTDW----KTNRIESANKEGERA  207 (232)
Q Consensus       164 g-~~~~~~~~~---~~~p~gla~-~~~~ly~td~----~~~~i~~~~~~g~~~  207 (232)
                      + ++...+...   ......+++ ++..|+++..    ....|+.++..+...
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~  324 (741)
T 2ecf_A          272 EQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQ  324 (741)
T ss_dssp             TTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred             CCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence            7 665554321   122334444 4556766543    234677777664443

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=98.62  E-value=0.00012  Score=59.73  Aligned_cols=195  Identities=7%  Similarity=-0.025  Sum_probs=127.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~   80 (232)
                      ..+++|++..+.|+.+.. ++ .|...++........+......+..++++  .+.| ++-...+.|...++.. .....
T Consensus       137 v~~v~~s~~~~~l~~~~~-dg-~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~i~i~d~~~~~~~~~  211 (401)
T 4aez_A          137 VASVKWSHDGSFLSVGLG-NG-LVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVL-SSGSRSGAIHHHDVRIANHQIG  211 (401)
T ss_dssp             EEEEEECTTSSEEEEEET-TS-CEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEE-EEEETTSEEEEEETTSSSCEEE
T ss_pred             EEEEEECCCCCEEEEECC-CC-eEEEEECcCCeEEEEecCCCCceEEEEEC--CCEE-EEEcCCCCEEEEecccCcceee
Confidence            357889986666666554 44 68888988655434444444566666664  4544 4555668999999984 33344


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCCcEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA--DSKSLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~~i~  158 (232)
                      .+........+++++|.+..|+.+..   .+.|...++........+... ......+++++.+..++.+-.  ..+.|.
T Consensus       212 ~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ll~~~~gs~d~~i~  287 (401)
T 4aez_A          212 TLQGHSSEVCGLAWRSDGLQLASGGN---DNVVQIWDARSSIPKFTKTNH-NAAVKAVAWCPWQSNLLATGGGTMDKQIH  287 (401)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTCSSEEEEECCC-SSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred             EEcCCCCCeeEEEEcCCCCEEEEEeC---CCeEEEccCCCCCccEEecCC-cceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence            44456667889999985555555553   356888888865544433332 556789999998788888755  578899


Q ss_pred             EEecCCCceEEEecCCCceEEEEEE--CCEEEEEe-CCCCcEEEEeCCCC
Q psy5751         159 CMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTD-WKTNRIESANKEGE  205 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td-~~~~~i~~~~~~g~  205 (232)
                      ..+++................+++.  +..++.+. ...+.|...+....
T Consensus       288 i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~  337 (401)
T 4aez_A          288 FWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS  337 (401)
T ss_dssp             EEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred             EEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence            9999866554444444456778874  44555553 35677777776643

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=98.62  E-value=8.5e-05  Score=63.29  Aligned_cols=212  Identities=14%  Similarity=0.154  Sum_probs=137.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++++.+....|..+. .++ .|...++++.....+ ......+.++++.+.++.|... ...+.|...+.++.....+.
T Consensus       307 ~~~~~~~~~~~l~t~~-~d~-~i~~w~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~~~~~~~~~~  382 (577)
T 2ymu_A          307 WGVAFSPDGQTIASAS-DDK-TVKLWNRNGQHLQTL-TGHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLT  382 (577)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-CEEEEETTSCEEEEE-CCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTCCEEEEEE
T ss_pred             EEEEECCCCCEEEEEe-CCC-eEEEEeCCCCeeEEE-eCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEcCCCCEEEEec
Confidence            4778888666555443 445 688888887665433 3334577889999866666544 45578888898776544443


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                       .....+.+++++|.+..|.....   .+.|...+.++.....+...  -....++++++++..|..+ ...+.|...+.
T Consensus       383 -~~~~~v~~~~~s~dg~~l~~~~~---d~~v~~~~~~~~~~~~~~~~--~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~  455 (577)
T 2ymu_A          383 -GHSSSVRGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLTGH--SSSVWGVAFSPDDQTIASA-SDDKTVKLWNR  455 (577)
T ss_dssp             -CCSSCEEEEEECTTSSCEEEEET---TSEEEEECTTCCEEEEEECC--SSCEEEEEECTTSSEEEEE-ETTSEEEEEET
T ss_pred             -CCCCCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCCEEEEecCC--CCCeEEEEECCCCCEEEEE-cCCCEEEEEEC
Confidence             35567789999986665555543   35677788776654444332  3456789999986666554 45677888888


Q ss_pred             CCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         163 RNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       163 ~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ++.....+.........+++. ++.+..+-...+.|...+..|...+.+.   .+......|++-++
T Consensus       456 ~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~---~h~~~v~~l~~s~d  519 (577)
T 2ymu_A          456 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT---GHSSSVRGVAFSPD  519 (577)
T ss_dssp             TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEE---CCSSCEEEEEECTT
T ss_pred             CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEe---CCCCCEEEEEEcCC
Confidence            876666555555556788884 5555555555677888887776555443   33445566666544

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.58  E-value=3.4e-05  Score=62.36  Aligned_cols=203  Identities=9%  Similarity=0.019  Sum_probs=127.3

Q ss_pred             EEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           5 ITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      .+|.+..+.|+++...++ ..|+.+++++.....+.........++++.+.++.|+++... ..|++.++++.....+..
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~~~~~~~  119 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLEENVVYQ  119 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEE
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCcceeeee
Confidence            457777777777654222 369999998876544443322233367888888999988854 589999999887666665


Q ss_pred             CCCCCc--eEEEEeCCCCeEEEEEc-------------------CCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751          84 KDLVNP--RGIVVHPYYRKLFWSDW-------------------NRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        84 ~~~~~p--~~iavd~~~~~ly~~d~-------------------~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~  142 (232)
                      ......  ...++++....+.....                   ......|++.++.+...+.+...  ......+++++
T Consensus       120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~sp  197 (388)
T 3pe7_A          120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE--NQWLGHPIYRP  197 (388)
T ss_dssp             CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEET
T ss_pred             chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC--CccccccEECC
Confidence            222211  12234664444443210                   11236799999988777666654  34578899999


Q ss_pred             -CCCEEEEEECC-----CCcEEEEecCCCceEEEecCCC--ceEEEEEE--CCEEEE-EeCCCC---cEEEEeCCCCCcc
Q psy5751         143 -RTDELCWVDAD-----SKSLECMTIRNRVRRKVYSNCT--YPFGLSIT--DEKYYW-TDWKTN---RIESANKEGERAP  208 (232)
Q Consensus       143 -~~~~Ly~~d~~-----~~~i~~~~~~g~~~~~~~~~~~--~p~gla~~--~~~ly~-td~~~~---~i~~~~~~g~~~~  208 (232)
                       ++++|.++...     ..+|+.++.++...+.+.....  .....++.  +..|++ ++....   .|+.++..+...+
T Consensus       198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~  277 (388)
T 3pe7_A          198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR  277 (388)
T ss_dssp             TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred             CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence             87788776543     4589999999887666544332  23345563  445644 443322   3889998866655


Q ss_pred             eE
Q psy5751         209 SI  210 (232)
Q Consensus       209 ~i  210 (232)
                      .+
T Consensus       278 ~l  279 (388)
T 3pe7_A          278 QL  279 (388)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.57  E-value=2.1e-06  Score=74.87  Aligned_cols=199  Identities=8%  Similarity=0.034  Sum_probs=126.8

Q ss_pred             CCCCE-EEEEEcCCCCcEEEEEcC--C-CceeEEEeC----CCCCccEEEEeecCCeEEEEeCC---------CCeEEEE
Q psy5751           9 CVEGQ-VYYSSVADKSSIKRAHLD--G-KNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQ---------MDTISMA   71 (232)
Q Consensus         9 ~~~~~-ly~~d~~~~~~i~~~~~~--g-~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~---------~~~I~~~   71 (232)
                      +.++. |+++..... +|+.++++  | .....+...    ......++++.+.++.|+++...         ...|+++
T Consensus        88 PDg~~~la~~~~~~~-~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~  166 (662)
T 3azo_A           88 PAGGPLLVFTHFGDQ-RLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV  166 (662)
T ss_dssp             SSSSCEEEEEBTTTC-CEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred             cCCCeEEEEEECCCC-eEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence            66777 888876666 89999998  4 443333321    12356788899988889887643         1579999


Q ss_pred             eCCC------CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCC-----CCCcEEEEeCCC-C---CcEEEEEcCCCCCcc
Q psy5751          72 NLND------DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNR-----SGPKIEWSNLDG-T---DREIFLKAADLKLPN  136 (232)
Q Consensus        72 ~~~g------~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~-----~~~~I~~~~~~g-~---~~~~~~~~~~~~~p~  136 (232)
                      ++++      ...+.+.........+++++|.++.|+++.+..     ....|+.+++++ .   ....+.... ...+.
T Consensus       167 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~  245 (662)
T 3azo_A          167 PLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIA  245 (662)
T ss_dssp             ETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEE
T ss_pred             ECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEc
Confidence            9998      555544412233456788999888898887543     125799999984 3   333444332 35677


Q ss_pred             eEEEeCCCCEEEEEECCCC--cEEEEecCCCceEEEecC---CCc------eEEEEEE-CCEEEEEeC-CCCcEEEEeCC
Q psy5751         137 SLAVDFRTDELCWVDADSK--SLECMTIRNRVRRKVYSN---CTY------PFGLSIT-DEKYYWTDW-KTNRIESANKE  203 (232)
Q Consensus       137 ~l~~d~~~~~Ly~~d~~~~--~i~~~~~~g~~~~~~~~~---~~~------p~gla~~-~~~ly~td~-~~~~i~~~~~~  203 (232)
                      .+++++++. ||++....+  +|+++++++++.+.+...   ...      ...+++. +++++++-. +..+|+.++..
T Consensus       246 ~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~  324 (662)
T 3azo_A          246 QAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPE  324 (662)
T ss_dssp             EEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETT
T ss_pred             ceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECC
Confidence            899999866 777655555  899999876665544331   111      2346663 555655533 44567777877


Q ss_pred             CCCcceE
Q psy5751         204 GERAPSI  210 (232)
Q Consensus       204 g~~~~~i  210 (232)
                      +...+.+
T Consensus       325 ~~~~~~l  331 (662)
T 3azo_A          325 SGELVDA  331 (662)
T ss_dssp             TTEEEEC
T ss_pred             CCcEEEe
Confidence            5554433

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=98.56  E-value=2.1e-05  Score=65.06  Aligned_cols=196  Identities=9%  Similarity=0.074  Sum_probs=129.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      .+++|++....++++...++ .|...++.....       ..........+.++++.+..+.++++....+.|...++..
T Consensus       185 ~~l~~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~  263 (430)
T 2xyi_A          185 YGLSWNPNLNGYLLSASDDH-TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN  263 (430)
T ss_dssp             CCEEECTTSTTEEEEECTTS-CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred             EEEEeCCCCCCeEEEEeCCC-eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence            46888886663555555556 799999875211       1223233456888999886777888888889999999876


Q ss_pred             C---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751          76 D---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        76 ~---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      .   .....+......+..++++|....++++...  .+.|...++....  ...+...  ......+++++.+..++.+
T Consensus       264 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~--dg~v~vwd~~~~~~~~~~~~~h--~~~v~~i~~sp~~~~~l~s  339 (430)
T 2xyi_A          264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA--DKTVALWDLRNLKLKLHSFESH--KDEIFQVQWSPHNETILAS  339 (430)
T ss_dssp             SCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCTTSCSEEEECC--SSCEEEEEECSSCTTEEEE
T ss_pred             CCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC--CCeEEEEeCCCCCCCeEEeecC--CCCEEEEEECCCCCCEEEE
Confidence            5   2333334455678999999976667766543  4568888887532  3333222  4567899999987778888


Q ss_pred             ECCCCcEEEEecCCCce------------EEE--e-cCCCceEEEEEE-CC-EEEEEeCCCCcEEEEeCC
Q psy5751         151 DADSKSLECMTIRNRVR------------RKV--Y-SNCTYPFGLSIT-DE-KYYWTDWKTNRIESANKE  203 (232)
Q Consensus       151 d~~~~~i~~~~~~g~~~------------~~~--~-~~~~~p~gla~~-~~-~ly~td~~~~~i~~~~~~  203 (232)
                      -...+.|...+++....            +.+  . .....+..+++. .+ +++++-...+.|...+..
T Consensus       340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~  409 (430)
T 2xyi_A          340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA  409 (430)
T ss_dssp             EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred             EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence            77778888888764211            122  2 234457888885 33 377776677777776654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=98.55  E-value=3.3e-05  Score=62.34  Aligned_cols=196  Identities=11%  Similarity=0.050  Sum_probs=126.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|.+..+.|..+. .++ .|...++........+......+..+++.+.++.++.+....+.|...|+.........
T Consensus       143 ~~v~~spdg~~l~sgs-~dg-~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~  220 (357)
T 4g56_B          143 KTLSVFSDGTQAVSGG-KDF-SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI  220 (357)
T ss_dssp             EEEEECSSSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC
T ss_pred             EEEEECCCCCEEEEEe-CCC-eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeee
Confidence            5788988666665544 444 68888888665444444445678889998766667777777788999888665433322


Q ss_pred             e--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          83 S--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        83 ~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .  .....+..++++|.++.++.+-..  .+.|...++........+... ......++++++++++..+-...+.|...
T Consensus       221 ~~~~~~~~v~~v~~sp~~~~~la~g~~--d~~i~~wd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i~iw  297 (357)
T 4g56_B          221 DFCASDTIPTSVTWHPEKDDTFACGDE--TGNVSLVNIKNPDSAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTVAVL  297 (357)
T ss_dssp             CCTTCCSCEEEEEECTTSTTEEEEEES--SSCEEEEESSCGGGCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred             eeccccccccchhhhhcccceEEEeec--ccceeEEECCCCcEeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence            2  233456789999877776665432  456888887655433333322 44568999999866655555567788888


Q ss_pred             ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++.++............+|++.  ++.++.|-...+.|..-+..
T Consensus       298 d~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~  342 (357)
T 4g56_B          298 DADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP  342 (357)
T ss_dssp             CTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred             ECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence            88866544333333446788883  45556665556766666643

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=98.52  E-value=0.00015  Score=58.46  Aligned_cols=203  Identities=14%  Similarity=0.017  Sum_probs=130.4

Q ss_pred             eEEEEEeCCC-CEEEEEEcCCCCcEEEEEcCCCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVE-GQVYYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~-~~ly~~d~~~~~~i~~~~~~g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ..+++|++.+ +.|+.+. .++ .|...++........+.  .....+.++++.+.++.++++-...+.|...++.+...
T Consensus        76 v~~~~~~~~~~~~l~s~~-~dg-~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~  153 (383)
T 3ei3_B           76 VTSLEWHPTHPTTVAVGS-KGG-DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI  153 (383)
T ss_dssp             EEEEEECSSCTTEEEEEE-BTS-CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE
T ss_pred             EEEEEECCCCCCEEEEEc-CCC-eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce
Confidence            3578899866 4555544 445 79999998665544443  23456788888874444555656668999999997554


Q ss_pred             EEEEeCC--CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          79 KVIVSKD--LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        79 ~~~~~~~--~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      ..+....  ......++++|....|+....   .+.|...++.+.....+...  .....++++++.+..++++-...+.
T Consensus       154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d~~  228 (383)
T 3ei3_B          154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLLLGLDGHEIFKEKLH--KAKVTHAEFNPRCDWLMATSSVDAT  228 (383)
T ss_dssp             EEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEEEETTSCEEEEEECS--SSCEEEEEECSSCTTEEEEEETTSE
T ss_pred             EEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEEEECCCCEEEEeccC--CCcEEEEEECCCCCCEEEEEeCCCE
Confidence            4444322  245789999996666655553   46788898876544444322  4677899999986645566566788


Q ss_pred             EEEEecCC----CceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcceEE
Q psy5751         157 LECMTIRN----RVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAPSIA  211 (232)
Q Consensus       157 i~~~~~~g----~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~~i~  211 (232)
                      |...+++.    ..............++++.  ++.++++-...+.|...+.. +.....+.
T Consensus       229 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  290 (383)
T 3ei3_B          229 VKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII  290 (383)
T ss_dssp             EEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred             EEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence            88888874    2222223344556788874  45555555556888888876 44444443

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.51  E-value=0.00028  Score=58.45  Aligned_cols=218  Identities=9%  Similarity=-0.029  Sum_probs=131.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC--CCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD--GKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~--g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      ..+++|++.+..|+++...++ .|..+++.  .......+.  .....+.++++.+.++.|+.++. .+.|+.+++....
T Consensus       105 v~~~~~s~d~~~l~~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~~  182 (450)
T 2vdu_B          105 IRNLRLTSDESRLIACADSDK-SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSIP  182 (450)
T ss_dssp             EEEEEECTTSSEEEEEEGGGT-EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSCC
T ss_pred             eEEEEEcCCCCEEEEEECCCC-eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCcc
Confidence            358899998888777765666 78888877  443333332  22357789999997788877765 5789999876544


Q ss_pred             CEE----EEeCCCCCceEEEEeCC---CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751          78 PKV----IVSKDLVNPRGIVVHPY---YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        78 ~~~----~~~~~~~~p~~iavd~~---~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      ...    .+.........++++|.   +..|+.+..   .+.|...++...................++++ ++..|+.+
T Consensus       183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~  258 (450)
T 2vdu_B          183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR---DEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA  258 (450)
T ss_dssp             CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET---TSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE
T ss_pred             cccccceeeecccCceEEEEEcCCCCCCcEEEEEcC---CCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE
Confidence            321    22224456789999985   335544443   35687777765543322221214567899999 65566544


Q ss_pred             ECCCCcEEEEecCCCceEEEec--------------------------CCCceEEEEEE--CCEEEEEeCCCCcEEEEeC
Q psy5751         151 DADSKSLECMTIRNRVRRKVYS--------------------------NCTYPFGLSIT--DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       151 d~~~~~i~~~~~~g~~~~~~~~--------------------------~~~~p~gla~~--~~~ly~td~~~~~i~~~~~  202 (232)
                       ...+.|...+++.++......                          ......++++.  +..|+.+....+.|...+.
T Consensus       259 -~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          259 -GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM  337 (450)
T ss_dssp             -ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred             -eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence             567789888888655322221                          01123466663  5678887756777777776


Q ss_pred             --C-CCCcceEEeccCCcceeEEEEEEc
Q psy5751         203 --E-GERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       203 --~-g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                        . +...+.+... .....+..+++.+
T Consensus       338 ~~~~~~~l~~~~~~-~~~~~v~~~~~~~  364 (450)
T 2vdu_B          338 SEKQKGDLALKQII-TFPYNVISLSAHN  364 (450)
T ss_dssp             CSSSTTCEEEEEEE-ECSSCEEEEEEET
T ss_pred             ccCCCCceeeccEe-ccCCceEEEEecC
Confidence              2 3222322221 1125566666654

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.50  E-value=2.8e-05  Score=61.39  Aligned_cols=184  Identities=11%  Similarity=0.092  Sum_probs=114.5

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR   90 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~   90 (232)
                      ++.||++... + .|++++.+|....... ........++++. .+.||+.. ..+.|+.++.+|.... ..........
T Consensus       107 ~~~l~v~t~~-~-~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~vgt-~~~~l~~~d~~g~~~~-~~~~~~~~~~  180 (330)
T 3hxj_A          107 EDILYVTSMD-G-HLYAINTDGTEKWRFK-TKKAIYATPIVSE-DGTIYVGS-NDNYLYAINPDGTEKW-RFKTNDAITS  180 (330)
T ss_dssp             TTEEEEECTT-S-EEEEECTTSCEEEEEE-CSSCCCSCCEECT-TSCEEEEC-TTSEEEEECTTSCEEE-EEECSSCCCS
T ss_pred             CCEEEEEecC-C-EEEEEcCCCCEEEEEc-CCCceeeeeEEcC-CCEEEEEc-CCCEEEEECCCCCEeE-EEecCCCcee
Confidence            6778776533 4 6999998854432222 2223455667776 56677665 3478999998844322 2222334556


Q ss_pred             EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751          91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus        91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~  170 (232)
                      .+++++ ++.||++.     +.+++++.+|...... ... .....++++|.+ +.||++.. .+.+.+++.+|.....+
T Consensus       181 ~~~~d~-~g~l~v~t-----~~l~~~d~~g~~~~~~-~~~-~~~~~~~~~~~~-g~l~v~t~-~~gl~~~~~~g~~~~~~  250 (330)
T 3hxj_A          181 AASIGK-DGTIYFGS-----DKVYAINPDGTEKWNF-YAG-YWTVTRPAISED-GTIYVTSL-DGHLYAINPDGTEKWRF  250 (330)
T ss_dssp             CCEECT-TCCEEEES-----SSEEEECTTSCEEEEE-CCS-SCCCSCCEECTT-SCEEEEET-TTEEEEECTTSCEEEEE
T ss_pred             eeEEcC-CCEEEEEe-----CEEEEECCCCcEEEEE-ccC-CcceeceEECCC-CeEEEEcC-CCeEEEECCCCCEeEEe
Confidence            778886 78888877     2488888554432222 111 345678888876 78988854 56788888776654444


Q ss_pred             ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEE
Q psy5751         171 YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIA  211 (232)
Q Consensus       171 ~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~  211 (232)
                      ......+..++++ ++.||++.. .+.|.+++++|+......
T Consensus       251 ~~~~~~~~~~~~~~~g~l~v~t~-~ggl~~~d~~g~~~~~~~  291 (330)
T 3hxj_A          251 KTGKRIESSPVIGNTDTIYFGSY-DGHLYAINPDGTEKWNFE  291 (330)
T ss_dssp             ECSSCCCSCCEECTTSCEEEECT-TCEEEEECTTSCEEEEEE
T ss_pred             eCCCCccccceEcCCCeEEEecC-CCCEEEECCCCcEEEEEE
Confidence            3333333456666 788888765 357999998766555444

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.49  E-value=0.00024  Score=62.56  Aligned_cols=205  Identities=8%  Similarity=-0.007  Sum_probs=129.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--------------
Q psy5751           3 IGITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--------------   65 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--------------   65 (232)
                      .+++|.+..+.|.++....+   ..|+.+++++.......... ....+++..+.++.||++....              
T Consensus       128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~  206 (710)
T 2xdw_A          128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL  206 (710)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred             EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCC
Confidence            36788988888866644332   26999999877654332222 1356788888788898876442              


Q ss_pred             -CeEEEEeCCCCCC--EEEEeCC--CCCceEEEEeCCCCeEEEEEcCCC--CCcEEEEeCCC------C--CcEEEEEcC
Q psy5751          66 -DTISMANLNDDQP--KVIVSKD--LVNPRGIVVHPYYRKLFWSDWNRS--GPKIEWSNLDG------T--DREIFLKAA  130 (232)
Q Consensus        66 -~~I~~~~~~g~~~--~~~~~~~--~~~p~~iavd~~~~~ly~~d~~~~--~~~I~~~~~~g------~--~~~~~~~~~  130 (232)
                       ..|++.++.+...  ..+....  .....+++++|.++.|+++.....  ...|+..++++      .  ....+....
T Consensus       207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~  286 (710)
T 2xdw_A          207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF  286 (710)
T ss_dssp             CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred             CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence             3499999977653  3343322  222468899998888888764321  46899999875      3  344443332


Q ss_pred             CCCCcceEEEeCCCCEEEEEECC---CCcEEEEecCCCc---eEEEecCCC--ceEEEEEE-CCEEEEEeCCCC--cEEE
Q psy5751         131 DLKLPNSLAVDFRTDELCWVDAD---SKSLECMTIRNRV---RRKVYSNCT--YPFGLSIT-DEKYYWTDWKTN--RIES  199 (232)
Q Consensus       131 ~~~~p~~l~~d~~~~~Ly~~d~~---~~~i~~~~~~g~~---~~~~~~~~~--~p~gla~~-~~~ly~td~~~~--~i~~  199 (232)
                        . ...-.+++++++||+....   ..+|+.+++++..   .+.+.....  ...++++. ++.|+++....+  +|+.
T Consensus       287 --~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~  363 (710)
T 2xdw_A          287 --E-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL  363 (710)
T ss_dssp             --S-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred             --C-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence              1 2223577778899888553   3589999998764   244433322  45677877 888888765443  6788


Q ss_pred             EeC-CCCCcceEE
Q psy5751         200 ANK-EGERAPSIA  211 (232)
Q Consensus       200 ~~~-~g~~~~~i~  211 (232)
                      ++. .|+..+.+.
T Consensus       364 ~~~~~g~~~~~l~  376 (710)
T 2xdw_A          364 HDLATGALLKIFP  376 (710)
T ss_dssp             EETTTCCEEEEEC
T ss_pred             EECCCCCEEEecC
Confidence            887 465445444

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=98.48  E-value=1.5e-05  Score=68.48  Aligned_cols=195  Identities=12%  Similarity=0.026  Sum_probs=122.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeC--C--CCeEEEEeC--CCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS--Q--MDTISMANL--NDD   76 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~--~--~~~I~~~~~--~g~   76 (232)
                      .++++.+..+.|.++...++ .+....+++.....+.........+++..+. +.+|+++.  .  ...|+.++.  +|.
T Consensus        25 ~~~~~~~DG~~la~~s~~~g-~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~  102 (582)
T 3o4h_A           25 YSLQGVVDGDKLLVVGFSEG-SVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE  102 (582)
T ss_dssp             EEEEEEETTTEEEEEEEETT-EEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred             heeecCCCCCeEEEEEccCC-ceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence            47788887788877765444 4544556666543433322235566677664 77888875  2  237888888  665


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC---
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD---  153 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~---  153 (232)
                      .. .+  .........++.|..+.++++....  ..+...++++...+.+.... .   ..+++++++.+|+++...   
T Consensus       103 ~~-~l--~~~~~~~~~~~s~dg~~~~~~s~~~--~~~~l~d~~~g~~~~l~~~~-~---~~~~~spDG~~la~~~~~~~~  173 (582)
T 3o4h_A          103 EQ-RL--EAVKPMRILSGVDTGEAVVFTGATE--DRVALYALDGGGLRELARLP-G---FGFVSDIRGDLIAGLGFFGGG  173 (582)
T ss_dssp             CE-EC--TTSCSBEEEEEEECSSCEEEEEECS--SCEEEEEEETTEEEEEEEES-S---CEEEEEEETTEEEEEEEEETT
T ss_pred             cc-cc--cCCCCceeeeeCCCCCeEEEEecCC--CCceEEEccCCcEEEeecCC-C---ceEEECCCCCEEEEEEEcCCC
Confidence            54 22  1233344566776565555554332  23446677777666665553 2   889999998898866432   


Q ss_pred             CCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCC-CcEEEEeCCCCCcc
Q psy5751         154 SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKT-NRIESANKEGERAP  208 (232)
Q Consensus       154 ~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~-~~i~~~~~~g~~~~  208 (232)
                      ...|+.++++++..+.+........++++.  +..|+.++... ..|+.++.++...+
T Consensus       174 ~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~  231 (582)
T 3o4h_A          174 RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE  231 (582)
T ss_dssp             EEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred             CeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence            256999999888777665555555777773  55677444432 27899998876655

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=98.48  E-value=0.00025  Score=56.17  Aligned_cols=190  Identities=8%  Similarity=0.023  Sum_probs=117.9

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      .++|++..+.|..+ ..++ .|..++++.......+......+..+++.+.++.|. +-...+.|...++........+.
T Consensus       127 ~~~~spdg~~l~~g-~~dg-~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~la-sg~~dg~i~iwd~~~~~~~~~~~  203 (321)
T 3ow8_A          127 TLAFSPDSQYLATG-THVG-KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDIATGKLLHTLE  203 (321)
T ss_dssp             CEEECTTSSEEEEE-CTTS-EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEEC
T ss_pred             EEEECCCCCEEEEE-cCCC-cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEE-EEcCCCeEEEEECCCCcEEEEEc
Confidence            46777755555443 3445 788888876554444444445678899998666665 44456789999987665444444


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      ........++++|....|..+..   .+.|...++........+... ......+++++++..|+ +-...+.|...+++
T Consensus       204 ~h~~~v~~l~~spd~~~l~s~s~---dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~-s~s~D~~v~iwd~~  278 (321)
T 3ow8_A          204 GHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHANLAGTLSGH-ASWVLNVAFCPDDTHFV-SSSSDKSVKVWDVG  278 (321)
T ss_dssp             CCSSCCCEEEECTTSCEEEEECT---TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEE-EEETTSCEEEEETT
T ss_pred             ccCCceeEEEEcCCCCEEEEEcC---CCeEEEEECCCcceeEEEcCC-CCceEEEEECCCCCEEE-EEeCCCcEEEEeCC
Confidence            44556789999985554444432   456888888766544443332 45578899999866655 44557788888887


Q ss_pred             CCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751         164 NRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       164 g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~  201 (232)
                      .... ..+........++++. ++...++-...+.|...+
T Consensus       279 ~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd  318 (321)
T 3ow8_A          279 TRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD  318 (321)
T ss_dssp             TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred             CCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence            6543 3333334445677874 444444444455555443

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=98.47  E-value=3.1e-06  Score=72.70  Aligned_cols=189  Identities=9%  Similarity=-0.020  Sum_probs=118.0

Q ss_pred             EEEEeCCCCEEEEEEc--CCC-CcEEEEEc--CCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           4 GITVDCVEGQVYYSSV--ADK-SSIKRAHL--DGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~--~~~-~~i~~~~~--~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ++.|++. +.+|+++.  ... .+|+.++.  +|... .+  .........++.+.++.++++....+.+...++++...
T Consensus        69 ~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~  144 (582)
T 3o4h_A           69 DPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL--EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL  144 (582)
T ss_dssp             EECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-EC--TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE
T ss_pred             cccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cc--cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE
Confidence            4566664 67788876  111 26888888  66554 22  22233445566666666666655545555778887766


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-Cc
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KS  156 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~  156 (232)
                      +.+.....   .+++++|.++.|+++..... ...|++.++++...+.+...  ......+++++++..|+.++... ..
T Consensus       145 ~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~--~~~~~~~~~SpDG~~l~~~~~~~~~~  219 (582)
T 3o4h_A          145 RELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG--EGSFSSASISPGMKVTAGLETAREAR  219 (582)
T ss_dssp             EEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS--SCEEEEEEECTTSCEEEEEECSSCEE
T ss_pred             EEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC--CCccccceECCCCCEEEEccCCCeeE
Confidence            66654222   78899998888886654321 25699999988777755433  34568899999988898555432 38


Q ss_pred             EEEEecCCCceEEEecCC-CceEEEE--------EE-CCEEEEEeCCCCcEEEEeC
Q psy5751         157 LECMTIRNRVRRKVYSNC-TYPFGLS--------IT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~~~-~~p~gla--------~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      |+.++++++..+ +.... ..+.+++        +. ++.+|++-...+.+.....
T Consensus       220 i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          220 LVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             EEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             EEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence            999999988776 43322 2222333        53 4467766555555555554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.46  E-value=1.1e-05  Score=65.22  Aligned_cols=179  Identities=8%  Similarity=-0.002  Sum_probs=112.2

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEee-cCCeEEEEeCC-----CCeEEEEeCCCCCCEEEEeCCC-CCceEEEEeC
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDW-VNRVLYWTDSQ-----MDTISMANLNDDQPKVIVSKDL-VNPRGIVVHP   96 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~-~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~iavd~   96 (232)
                      .|+++++.+.....+... ......+++.+ .++.|.++...     ..+|+.++.++...+.+..... ......+.+|
T Consensus       169 ~l~~~d~~~g~~~~l~~~-~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp  247 (388)
T 3pe7_A          169 RLMRVDLKTGESTVILQE-NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVP  247 (388)
T ss_dssp             EEEEEETTTCCEEEEEEE-SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECT
T ss_pred             eEEEEECCCCceEEeecC-CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECC
Confidence            688899887665555443 34567888988 77777666543     4589999999887766654221 1244678998


Q ss_pred             CCCeEEEEEcCCCCC--cEEEEeCCCCCcEEEEEcCC----CCCcceEEEeCCCCEEEEEE--------CCCCcEEEEec
Q psy5751          97 YYRKLFWSDWNRSGP--KIEWSNLDGTDREIFLKAAD----LKLPNSLAVDFRTDELCWVD--------ADSKSLECMTI  162 (232)
Q Consensus        97 ~~~~ly~~d~~~~~~--~I~~~~~~g~~~~~~~~~~~----~~~p~~l~~d~~~~~Ly~~d--------~~~~~i~~~~~  162 (232)
                      .++.|++........  .|+++++++...+.+.....    ...+.++++++++.+|+++-        .....|+.+++
T Consensus       248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~  327 (388)
T 3pe7_A          248 DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM  327 (388)
T ss_dssp             TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred             CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence            777776654322233  49999999887666544320    02266778888888888763        44668999999


Q ss_pred             CCCceEEEecCCC-----------ceEEEEE--ECCEEEEEeCCC--CcEEEEeCC
Q psy5751         163 RNRVRRKVYSNCT-----------YPFGLSI--TDEKYYWTDWKT--NRIESANKE  203 (232)
Q Consensus       163 ~g~~~~~~~~~~~-----------~p~gla~--~~~~ly~td~~~--~~i~~~~~~  203 (232)
                      +++..+.+.....           ....+++  ++..|+++....  ..|+.++..
T Consensus       328 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~  383 (388)
T 3pe7_A          328 KNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP  383 (388)
T ss_dssp             TTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred             cCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence            9877666644322           2344566  355777765432  345555543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=98.45  E-value=5.3e-05  Score=66.44  Aligned_cols=202  Identities=11%  Similarity=0.070  Sum_probs=124.2

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCC-----CceeEEEeCCCC--------------CccEEEEeecCCeEEEEeC-
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDG-----KNVEDVITTNIR--------------SPEGLTFDWVNRVLYWTDS-   63 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g-----~~~~~~~~~~~~--------------~p~gl~~d~~~~~ly~~d~-   63 (232)
                      +++|++..+.|+++.  ++ .|+.+++++     .....+......              .+.++++.+.++.|+++.. 
T Consensus       125 ~~~~SpdG~~la~~~--~~-~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d  201 (706)
T 2z3z_A          125 SLDFSPVGDRVAYVR--NH-NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMD  201 (706)
T ss_dssp             TCEECTTSSEEEEEE--TT-EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEE
T ss_pred             CCcCCCCCCEEEEEE--CC-eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEEC
Confidence            356888777777753  34 789988876     443333222211              2478999988888888751 


Q ss_pred             -------------------------------CCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCC--
Q psy5751          64 -------------------------------QMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNR--  108 (232)
Q Consensus        64 -------------------------------~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~--  108 (232)
                                                     ....|++.++++.....+..  .....+..++.+|.++.|+++....  
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~  281 (706)
T 2z3z_A          202 QSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ  281 (706)
T ss_dssp             CTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS
T ss_pred             CCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC
Confidence                                           23578888988765433332  1223457889999777788865432  


Q ss_pred             CCCcEEEEeCCCC-CcEEEEEcCCC---CCcceEEEeC--CCCEEEEEECC-CCcEEEEecCCCceEEEecCCCceEE-E
Q psy5751         109 SGPKIEWSNLDGT-DREIFLKAADL---KLPNSLAVDF--RTDELCWVDAD-SKSLECMTIRNRVRRKVYSNCTYPFG-L  180 (232)
Q Consensus       109 ~~~~I~~~~~~g~-~~~~~~~~~~~---~~p~~l~~d~--~~~~Ly~~d~~-~~~i~~~~~~g~~~~~~~~~~~~p~g-l  180 (232)
                      ....|+..++++. ....+......   .....+++++  +++.||.++.. ..+|+.++.++...+.+........+ +
T Consensus       282 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~  361 (706)
T 2z3z_A          282 NECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFA  361 (706)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEE
T ss_pred             CeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeee
Confidence            2247888888876 44444432101   1236789998  75555555332 35788888777655555333222233 5


Q ss_pred             EEE--CCEEEEEeCCCC----cEEEEeCCCCCcc
Q psy5751         181 SIT--DEKYYWTDWKTN----RIESANKEGERAP  208 (232)
Q Consensus       181 a~~--~~~ly~td~~~~----~i~~~~~~g~~~~  208 (232)
                      ++.  ++.||++....+    .|++++..+...+
T Consensus       362 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~  395 (706)
T 2z3z_A          362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK  395 (706)
T ss_dssp             EECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE
T ss_pred             EEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce
Confidence            663  567888876654    8888888765544

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=98.43  E-value=0.00073  Score=59.99  Aligned_cols=196  Identities=11%  Similarity=-0.002  Sum_probs=131.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+++|++....|..+. .++ .|...++........+......+.++++.+.++.|..+.. .+.|.+.++........
T Consensus        16 v~~i~~sp~~~~la~~~-~~g-~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~~~~~~   92 (814)
T 3mkq_A           16 VKGIDFHPTEPWVLTTL-YSG-RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-DFRIRVFNYNTGEKVVD   92 (814)
T ss_dssp             EEEEEECSSSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-TSEEEEEETTTCCEEEE
T ss_pred             eEEEEECCCCCEEEEEe-CCC-EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCcEEEE
Confidence            45899999777777665 345 7899998765544444444567899999997777776654 68999999887665555


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +.........++++|.+..|..+..   .+.|...+++.... ...+... -.....+++++.++.++++-...+.|...
T Consensus        93 ~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~vw~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~dg~v~vw  168 (814)
T 3mkq_A           93 FEAHPDYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLDRTVKVW  168 (814)
T ss_dssp             EECCSSCEEEEEECSSSSEEEEEET---TSEEEEEEGGGTSEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred             EecCCCCEEEEEEeCCCCEEEEEcC---CCEEEEEECCCCceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence            5556667889999996666766553   45688888876533 2233322 45678999999446566666667889998


Q ss_pred             ecCCCceE-EEecCC-CceEEEEEE---CCEEEEEeCCCCcEEEEeCCC
Q psy5751         161 TIRNRVRR-KVYSNC-TYPFGLSIT---DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       161 ~~~g~~~~-~~~~~~-~~p~gla~~---~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +++..... .+.... .....+++.   ++.++++-...+.|...+...
T Consensus       169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~  217 (814)
T 3mkq_A          169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT  217 (814)
T ss_dssp             ETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT
T ss_pred             ECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence            88755443 332222 444566663   455555655667787777653

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=98.41  E-value=0.0002  Score=63.15  Aligned_cols=201  Identities=9%  Similarity=0.053  Sum_probs=125.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC----------------CccEEEEeecCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR----------------SPEGLTFDWVNRVLYWTDSQM   65 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~----------------~p~gl~~d~~~~~ly~~d~~~   65 (232)
                      +..++|.+..+.|.++..  + .|+.+++++.....+......                .+.++++.+.++.|+++....
T Consensus       154 ~~~~~~SPDG~~la~~~~--~-~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~  230 (741)
T 2ecf_A          154 ATDAKLSPKGGFVSFIRG--R-NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE  230 (741)
T ss_dssp             EEEEEECTTSSEEEEEET--T-EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred             cccccCCCCCCEEEEEeC--C-cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence            357889998888877763  4 799999987654333322111                157789999888888874322


Q ss_pred             --------------------------------CeEEEEeCCC-CCCEEEEeC--CCCCceEEEEeCCCCeEEEEEc--CC
Q psy5751          66 --------------------------------DTISMANLND-DQPKVIVSK--DLVNPRGIVVHPYYRKLFWSDW--NR  108 (232)
Q Consensus        66 --------------------------------~~I~~~~~~g-~~~~~~~~~--~~~~p~~iavd~~~~~ly~~d~--~~  108 (232)
                                                      ..|+++++++ .....+...  ....+..++. |.+..|+++..  ..
T Consensus       231 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~  309 (741)
T 2ecf_A          231 SPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ  309 (741)
T ss_dssp             TTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS
T ss_pred             CCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC
Confidence                                            1788888887 665544321  2234567888 87788887653  22


Q ss_pred             CCCcEEEEeCCCCCcEEEEEcCCCC---CcceEEEeCCCCEEEEEECCC--CcEEEEecCCCceEEEecCCCceEEE-EE
Q psy5751         109 SGPKIEWSNLDGTDREIFLKAADLK---LPNSLAVDFRTDELCWVDADS--KSLECMTIRNRVRRKVYSNCTYPFGL-SI  182 (232)
Q Consensus       109 ~~~~I~~~~~~g~~~~~~~~~~~~~---~p~~l~~d~~~~~Ly~~d~~~--~~i~~~~~~g~~~~~~~~~~~~p~gl-a~  182 (232)
                      ....|+..++++.....+.......   ....+++++++. ++++....  .+|+.++.+|. .+.+.........+ ++
T Consensus       310 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~  387 (741)
T 2ecf_A          310 KKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAV  387 (741)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEE
T ss_pred             CeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEE
Confidence            2457888998877766555432111   336889999866 55554444  47999888876 44443332233354 35


Q ss_pred             E--CCEEEEEeCCC----CcEEEEeCCCCCcc
Q psy5751         183 T--DEKYYWTDWKT----NRIESANKEGERAP  208 (232)
Q Consensus       183 ~--~~~ly~td~~~----~~i~~~~~~g~~~~  208 (232)
                      .  ++.||++-...    ..|++++.+|...+
T Consensus       388 s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~  419 (741)
T 2ecf_A          388 DEKAGLAYFRAGIESARESQIYAVPLQGGQPQ  419 (741)
T ss_dssp             ETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred             eCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence            3  55777765433    35777776665444

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.40  E-value=6.5e-05  Score=60.23  Aligned_cols=147  Identities=15%  Similarity=0.128  Sum_probs=96.2

Q ss_pred             EEEEEEcC--CCCcEEEEEcC--CCceeEE------EeCCCCCccEEEE--eecCC--eEEEEeCCCCeEEEEeC----C
Q psy5751          13 QVYYSSVA--DKSSIKRAHLD--GKNVEDV------ITTNIRSPEGLTF--DWVNR--VLYWTDSQMDTISMANL----N   74 (232)
Q Consensus        13 ~ly~~d~~--~~~~i~~~~~~--g~~~~~~------~~~~~~~p~gl~~--d~~~~--~ly~~d~~~~~I~~~~~----~   74 (232)
                      .+|.++-.  .+ +|..+.++  ......+      +...+..|.|+++  ++..+  .+|+++.. +++..+.+    +
T Consensus        88 la~as~R~~~~n-~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~  165 (355)
T 3amr_A           88 IAAASNRSEGKN-TIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKN  165 (355)
T ss_dssp             EEEEEECSTTCC-EEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTT
T ss_pred             EEEEeCCCCCCC-eEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCC
Confidence            45777776  67 78777664  2233233      1244589999999  66555  37767765 77777554    2


Q ss_pred             CCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC---cEEEEEc--CCC-CCcceEEEeCCC--
Q psy5751          75 DDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD---REIFLKA--ADL-KLPNSLAVDFRT--  144 (232)
Q Consensus        75 g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~---~~~~~~~--~~~-~~p~~l~~d~~~--  144 (232)
                      |.....++.  .-...|.++++|+..++||+++..   .-|++++.+...   .+.+...  ..+ ..+.||++.+..  
T Consensus       166 g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd---~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g  242 (355)
T 3amr_A          166 GYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED---EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG  242 (355)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT---TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG
T ss_pred             CcccceEEEEecCCCCcceEEEcCCCCeEEEeccc---ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC
Confidence            222222222  234589999999999999999965   239999965332   2333221  113 378999997543  


Q ss_pred             -CEEEEEECCCCcEEEEecCC
Q psy5751         145 -DELCWVDADSKSLECMTIRN  164 (232)
Q Consensus       145 -~~Ly~~d~~~~~i~~~~~~g  164 (232)
                       ++|++++.+.+....++..+
T Consensus       243 ~gyLivSsQG~~s~~Vydr~~  263 (355)
T 3amr_A          243 KGYLMASSQGNSSYAIYDRQG  263 (355)
T ss_dssp             CEEEEEEEGGGTEEEEEESST
T ss_pred             CEEEEEEcCCCCEEEEEECCC
Confidence             58999998888888888864

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=98.39  E-value=0.00043  Score=54.83  Aligned_cols=215  Identities=10%  Similarity=0.055  Sum_probs=133.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++++.+.... ..+-..++ .|...++........+.........+++.+.++.|. +....+.|...++........+
T Consensus        84 ~~~~~~~~~~~-l~s~s~D~-~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~-~g~~dg~v~i~~~~~~~~~~~~  160 (321)
T 3ow8_A           84 VSVDISHTLPI-AASSSLDA-HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGVESGKKEYSL  160 (321)
T ss_dssp             EEEEECSSSSE-EEEEETTS-EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEE-EECTTSEEEEEETTTCSEEEEE
T ss_pred             EEEEECCCCCE-EEEEeCCC-cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEE-EEcCCCcEEEEEcCCCceeEEe
Confidence            45667664443 34444455 788888876554344444445677899998666554 6666789999998877666555


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      .........++++|.+..|.....   .+.|...++........+... ......+++++++..| .+-...+.|...++
T Consensus       161 ~~~~~~v~~~~~spdg~~lasg~~---dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spd~~~l-~s~s~dg~i~iwd~  235 (321)
T 3ow8_A          161 DTRGKFILSIAYSPDGKYLASGAI---DGIINIFDIATGKLLHTLEGH-AMPIRSLTFSPDSQLL-VTASDDGYIKIYDV  235 (321)
T ss_dssp             ECSSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCCCEEEECTTSCEE-EEECTTSCEEEEET
T ss_pred             cCCCceEEEEEECCCCCEEEEEcC---CCeEEEEECCCCcEEEEEccc-CCceeEEEEcCCCCEE-EEEcCCCeEEEEEC
Confidence            555566789999996666655553   356888888755433333321 3456899999985555 45566788888888


Q ss_pred             CCCceEEE-ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC-cceEEeccCCcceeEEEEEEcC
Q psy5751         163 RNRVRRKV-YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER-APSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       163 ~g~~~~~~-~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~-~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +....... .........+++. ++...++-...+.|...+..... ...+   ........+|++-++
T Consensus       236 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~---~~h~~~v~~v~~s~~  301 (321)
T 3ow8_A          236 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF---FDHQDQVWGVKYNGN  301 (321)
T ss_dssp             TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTT
T ss_pred             CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE---cCCCCcEEEEEECCC
Confidence            76554333 3334445678874 45555555556778877765322 2222   123344566665443

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=98.35  E-value=0.00075  Score=55.88  Aligned_cols=197  Identities=8%  Similarity=-0.063  Sum_probs=124.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeE----EEeCCCCCccEEEEeec---CCeEEEEeCCCCeEEEEeCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVED----VITTNIRSPEGLTFDWV---NRVLYWTDSQMDTISMANLN   74 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~----~~~~~~~~p~gl~~d~~---~~~ly~~d~~~~~I~~~~~~   74 (232)
                      +.+++|++.+..|+.++. ++ .|+.+++.......    .+......+..+++.+.   ++.|+ +-...+.|...++.
T Consensus       152 v~~~~~sp~~~~l~~~~~-~g-~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~~  228 (450)
T 2vdu_B          152 PNAISIAEDDTTVIIADK-FG-DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHYP  228 (450)
T ss_dssp             EEEEEECTTSSEEEEEET-TS-EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEES
T ss_pred             ceEEEEcCCCCEEEEEeC-CC-cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEECC
Confidence            458899998888887765 34 68888886543221    22223357888999986   44444 55556889999987


Q ss_pred             CCCCEEE-EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc------------------------
Q psy5751          75 DDQPKVI-VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA------------------------  129 (232)
Q Consensus        75 g~~~~~~-~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~------------------------  129 (232)
                      ....... .......+..++++ ..+.|+....   .+.|...++........+..                        
T Consensus       229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~---d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (450)
T 2vdu_B          229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGG---DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND  304 (450)
T ss_dssp             CTTCEEEECCCCSSCEEEEEEC-STTEEEEEES---SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------
T ss_pred             CCceeeeeecCCCCceEEEEEC-CCCEEEEEeC---CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc
Confidence            6554433 43455667889998 5666665553   45788888876553333321                        


Q ss_pred             CCCCCcceEEEeCCCCEEEEEECCCCcEEEEec--CCC-ceEEE--ecCCCceEEEEEECCEEEEEeCCC-------C--
Q psy5751         130 ADLKLPNSLAVDFRTDELCWVDADSKSLECMTI--RNR-VRRKV--YSNCTYPFGLSITDEKYYWTDWKT-------N--  195 (232)
Q Consensus       130 ~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~--~g~-~~~~~--~~~~~~p~gla~~~~~ly~td~~~-------~--  195 (232)
                      ..-....++++.+++..||.+....+.|...++  ... ....+  ...-..+.++++..+.++++-...       +  
T Consensus       305 ~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i  384 (450)
T 2vdu_B          305 IIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFA  384 (450)
T ss_dssp             CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSE
T ss_pred             cceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcce
Confidence            001245688999988889888767787877777  322 22222  222366789999877777774432       2  


Q ss_pred             cEEEEeCCCC
Q psy5751         196 RIESANKEGE  205 (232)
Q Consensus       196 ~i~~~~~~g~  205 (232)
                      .++.++..+.
T Consensus       385 ~v~~~~~~~~  394 (450)
T 2vdu_B          385 KFIEYNLNEN  394 (450)
T ss_dssp             EEEEEETTTT
T ss_pred             EEEEEEcCCC
Confidence            5666665543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=98.35  E-value=8.4e-05  Score=65.15  Aligned_cols=199  Identities=9%  Similarity=0.041  Sum_probs=119.1

Q ss_pred             EEEEEeCCCCEEEEEEcC-------------------------------CCCcEEEEEcCCCceeEEEeC--CCCCccEE
Q psy5751           3 IGITVDCVEGQVYYSSVA-------------------------------DKSSIKRAHLDGKNVEDVITT--NIRSPEGL   49 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~-------------------------------~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl   49 (232)
                      .++.|++.++.|+++...                               ....|+.+++++.....+...  .-..+..+
T Consensus       184 ~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~  263 (706)
T 2z3z_A          184 KGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNL  263 (706)
T ss_dssp             CSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEE
T ss_pred             ceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeE
Confidence            578899988888887621                               112688888887654333221  11345678


Q ss_pred             EEeecCCeEEEEeCCC----CeEEEEeCCCC-CCEEEEeC-CC---CCceEEEEeC--CCCeEEEEEcCCCCCcEEEEeC
Q psy5751          50 TFDWVNRVLYWTDSQM----DTISMANLNDD-QPKVIVSK-DL---VNPRGIVVHP--YYRKLFWSDWNRSGPKIEWSNL  118 (232)
Q Consensus        50 ~~d~~~~~ly~~d~~~----~~I~~~~~~g~-~~~~~~~~-~~---~~p~~iavd~--~~~~ly~~d~~~~~~~I~~~~~  118 (232)
                      ++.+.++.|+++....    ..|+.+++.+. ....+... ..   ....++++.|  .++.||.+... +..+|+.++.
T Consensus       264 ~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~  342 (706)
T 2z3z_A          264 SWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD-GWNHLYLYDT  342 (706)
T ss_dssp             EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT-SSCEEEEEET
T ss_pred             EEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC-CccEEEEEEC
Confidence            8888788888854332    37889998876 44444431 11   1235678887  55555444433 3567888887


Q ss_pred             CCCCcEEEEEcCCCCCcce-EEEeCCCCEEEEEECCCC----cEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEe
Q psy5751         119 DGTDREIFLKAADLKLPNS-LAVDFRTDELCWVDADSK----SLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTD  191 (232)
Q Consensus       119 ~g~~~~~~~~~~~~~~p~~-l~~d~~~~~Ly~~d~~~~----~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td  191 (232)
                      ++.....+...  ...... +++++++++||++....+    +|+.++.+++..+.+. .......+++.  +..+.++.
T Consensus       343 ~~~~~~~l~~~--~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~spdg~~l~~~~  419 (706)
T 2z3z_A          343 TGRLIRQVTKG--EWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT-PESGMHRTQLSPDGSAIIDIF  419 (706)
T ss_dssp             TSCEEEECCCS--SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC-CSSSEEEEEECTTSSEEEEEE
T ss_pred             CCCEEEecCCC--CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc-CCCceEEEEECCCCCEEEEEe
Confidence            77654444222  122334 799999889999877654    8999999876644433 23334555653  33444442


Q ss_pred             CCC---CcEEEEeCCCC
Q psy5751         192 WKT---NRIESANKEGE  205 (232)
Q Consensus       192 ~~~---~~i~~~~~~g~  205 (232)
                      ...   ..|+..+..+.
T Consensus       420 ~~~~~p~~i~l~d~~~~  436 (706)
T 2z3z_A          420 QSPTVPRKVTVTNIGKG  436 (706)
T ss_dssp             ECSSCSCEEEEEESSSC
T ss_pred             cCCCCCcEEEEEECCCC
Confidence            211   34666665543

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=98.35  E-value=0.00042  Score=56.39  Aligned_cols=196  Identities=10%  Similarity=0.011  Sum_probs=119.1

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee----EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC----
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE----DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD----   76 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~----~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~----   76 (232)
                      +++++....++++...++ .|..++++.....    ..+......+.++++.+..+.++++-...+.|...++...    
T Consensus        40 ~~~~~~~~~~~~~~~~~g-~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~  118 (402)
T 2aq5_A           40 CAVNPKFMALICEASGGG-AFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL  118 (402)
T ss_dssp             EEECSSEEEEEBCCSSSC-CEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred             EEECCCeEEEEEEEcCCC-EEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence            345543333333334445 7888888654221    1122234567888998733445555556688999998765    


Q ss_pred             ---CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-cCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          77 ---QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-AADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        77 ---~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                         .....+.........++++|....++++-..  .+.|...++........+. ...-.....+++++++..|+.+ .
T Consensus       119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~  195 (402)
T 2aq5_A          119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC--DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS-C  195 (402)
T ss_dssp             CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET--TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE-E
T ss_pred             ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC--CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE-e
Confidence               2333444466678899999865344444332  3568888887654433331 2224467899999976666555 4


Q ss_pred             CCCcEEEEecCCCceEEEe-cC--CCceEEEEEE-CCEEEEEe---CCCCcEEEEeCCC
Q psy5751         153 DSKSLECMTIRNRVRRKVY-SN--CTYPFGLSIT-DEKYYWTD---WKTNRIESANKEG  204 (232)
Q Consensus       153 ~~~~i~~~~~~g~~~~~~~-~~--~~~p~gla~~-~~~ly~td---~~~~~i~~~~~~g  204 (232)
                      ..+.|...+++........ ..  ...+..+++. ++.++.+-   ...+.|...+...
T Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~  254 (402)
T 2aq5_A          196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH  254 (402)
T ss_dssp             TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred             cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence            5788999998865543332 22  2235677774 66766665   5678888888774

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=98.34  E-value=0.0007  Score=55.15  Aligned_cols=195  Identities=10%  Similarity=0.030  Sum_probs=129.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCC-CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDG-KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g-~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      .+++++.  +.|+. -..++ .|...++.. ......+......+.++++.+.++.|+ +-...+.|...++........
T Consensus       180 ~~~~~~~--~~l~~-~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~  254 (401)
T 4aez_A          180 GCLSWNR--HVLSS-GSRSG-AIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLA-SGGNDNVVQIWDARSSIPKFT  254 (401)
T ss_dssp             EEEEEET--TEEEE-EETTS-EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTCSSEEEE
T ss_pred             EEEEECC--CEEEE-EcCCC-CEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEE-EEeCCCeEEEccCCCCCccEE
Confidence            3566643  44443 33445 788888873 333333444456788999988555554 555567899999987665555


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC-CCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA-DSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~-~~~~i~~~  160 (232)
                      +.........++++|.+..++.+..+...+.|...++........+..  -.....+++++++..|+.+.. ..+.|...
T Consensus       255 ~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~  332 (401)
T 4aez_A          255 KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDNNLSIW  332 (401)
T ss_dssp             ECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTCEEEEE
T ss_pred             ecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCCcEEEE
Confidence            555566778999999777888876533367799999876655444443  456889999998777777643 56788888


Q ss_pred             ecCCCceEEEe---cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         161 TIRNRVRRKVY---SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       161 ~~~g~~~~~~~---~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ++.........   ........+++. ++...++-...+.|...+...
T Consensus       333 ~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~  380 (401)
T 4aez_A          333 SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD  380 (401)
T ss_dssp             EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred             ecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence            88765443332   234445678885 455555656678888888763

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=98.34  E-value=0.00075  Score=55.31  Aligned_cols=193  Identities=10%  Similarity=0.040  Sum_probs=121.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++....|. +-..++ .|...++........+......+.++++.+.++ +..+-...+.|...++.+......+
T Consensus       112 ~~~~~~p~~~~l~-s~s~Dg-~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~~~~~  188 (410)
T 1vyh_C          112 TRVIFHPVFSVMV-SASEDA-TIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTM  188 (410)
T ss_dssp             EEEEECSSSSEEE-EEESSS-CEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCEEECC
T ss_pred             EEEEEcCCCCEEE-EEeCCC-eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEE
Confidence            4788988555544 444455 799999886655455554456788999988555 4456666688888998776544434


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      .........++++|.+..|+.+..   .+.|...++........+... ......+++++++ .++.+-...+.|...++
T Consensus       189 ~~h~~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~  263 (410)
T 1vyh_C          189 HGHDHNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDG-TLIASCSNDQTVRVWVV  263 (410)
T ss_dssp             CCCSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTS-SEEEEEETTSCEEEEET
T ss_pred             cCCCCCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeCC-CccEEEEEECCCC-CEEEEEcCCCeEEEEEC
Confidence            445556789999985555554443   456888888765543333332 4456788888874 44455556777888888


Q ss_pred             CCCceEEEe-cCCCceEEEEEEC---------------------CEEEEEeCCCCcEEEEeCC
Q psy5751         163 RNRVRRKVY-SNCTYPFGLSITD---------------------EKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       163 ~g~~~~~~~-~~~~~p~gla~~~---------------------~~ly~td~~~~~i~~~~~~  203 (232)
                      ......... ........+++..                     +.+.++-...+.|...+..
T Consensus       264 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~  326 (410)
T 1vyh_C          264 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS  326 (410)
T ss_dssp             TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred             CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence            765443332 2233334555532                     4455665666777777765

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=98.34  E-value=0.00061  Score=54.29  Aligned_cols=215  Identities=9%  Similarity=-0.020  Sum_probs=126.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++|++..+.|+.+. .++ .|..+++++..  ....+......+.++++.+.++.|+.+. ..+.|...++.......
T Consensus        12 ~~~~~s~~~~~l~~~~-~d~-~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~   88 (372)
T 1k8k_C           12 SCHAWNKDRTQIAICP-NNH-EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKP   88 (372)
T ss_dssp             CEEEECTTSSEEEEEC-SSS-EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEE
T ss_pred             EEEEECCCCCEEEEEe-CCC-EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeee
Confidence            4788998666665553 345 78888888764  3233434446788999998666666444 55788888886654332


Q ss_pred             EE--eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE---EEEEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          81 IV--SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE---IFLKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        81 ~~--~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~---~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      ..  ......+..++++|....|+.+..   .+.|...+++.....   .............+++++++..|+.+ ...+
T Consensus        89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg  164 (372)
T 1k8k_C           89 TLVILRINRAARCVRWAPNEKKFAVGSG---SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG-SCDF  164 (372)
T ss_dssp             EEECCCCSSCEEEEEECTTSSEEEEEET---TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE-ETTS
T ss_pred             eEEeecCCCceeEEEECCCCCEEEEEeC---CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE-cCCC
Confidence            22  234556789999986666666654   345766666655421   11112113457899999986655544 4567


Q ss_pred             cEEEEecC-------------------CCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEecc
Q psy5751         156 SLECMTIR-------------------NRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDM  214 (232)
Q Consensus       156 ~i~~~~~~-------------------g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~  214 (232)
                      .|...++.                   +.....+........++++. ++.++++-...+.|...+.. +.....+.   
T Consensus       165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---  241 (372)
T 1k8k_C          165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA---  241 (372)
T ss_dssp             CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE---
T ss_pred             CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc---
Confidence            77777753                   12222222233445678874 44444444456778888876 44333332   


Q ss_pred             CCcceeEEEEEEc
Q psy5751         215 MGTTYMYGIAAVP  227 (232)
Q Consensus       215 ~~~~~p~gi~~~~  227 (232)
                      .....+..+++.+
T Consensus       242 ~~~~~v~~~~~~~  254 (372)
T 1k8k_C          242 SETLPLLAVTFIT  254 (372)
T ss_dssp             CSSCCEEEEEEEE
T ss_pred             cCCCCeEEEEEec
Confidence            2222345555543

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=98.28  E-value=0.0011  Score=54.43  Aligned_cols=216  Identities=9%  Similarity=0.029  Sum_probs=131.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++.++.|. +-..++ .|...++++......+......+.++++.+.++.|+ +-...+.|...++....+...+
T Consensus       154 ~~v~~~~~~~~l~-sgs~D~-~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~-s~s~D~~i~~wd~~~~~~~~~~  230 (410)
T 1vyh_C          154 QDISFDHSGKLLA-SCSADM-TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTF  230 (410)
T ss_dssp             EEEEECTTSSEEE-EEETTS-CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEE
T ss_pred             EEEEEcCCCCEEE-EEeCCC-eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEE-EEeCCCeEEEEECCCCcEEEEE
Confidence            4788888555544 443445 688888876543233333345778899988665554 5556789999998876655555


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC------------------
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT------------------  144 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~------------------  144 (232)
                      .........++.++ ++.++.+-..  .+.|...++........+... ......+++++..                  
T Consensus       231 ~~h~~~v~~~~~~~-~g~~l~s~s~--D~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (410)
T 1vyh_C          231 TGHREWVRMVRPNQ-DGTLIASCSN--DQTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGK  306 (410)
T ss_dssp             ECCSSCEEEEEECT-TSSEEEEEET--TSCEEEEETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred             eCCCccEEEEEECC-CCCEEEEEcC--CCeEEEEECCCCceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCC
Confidence            55556678888887 4444444432  355777887765544333322 3456677887742                  


Q ss_pred             -CEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCccee
Q psy5751         145 -DELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYM  220 (232)
Q Consensus       145 -~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p  220 (232)
                       +.+.++-...+.|...++..+.. ..+........++++. ++...++-...+.|...+.. +.....+.   .+....
T Consensus       307 ~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~---~h~~~v  383 (410)
T 1vyh_C          307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN---AHEHFV  383 (410)
T ss_dssp             -CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE---CCSSCE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc---CCCCcE
Confidence             34555656678888888876543 3333344456688885 45555565666778888876 33334332   233345


Q ss_pred             EEEEEEcC
Q psy5751         221 YGIAAVPS  228 (232)
Q Consensus       221 ~gi~~~~~  228 (232)
                      ..+++-++
T Consensus       384 ~~l~~~~~  391 (410)
T 1vyh_C          384 TSLDFHKT  391 (410)
T ss_dssp             EEEEECSS
T ss_pred             EEEEEcCC
Confidence            66665443

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=98.26  E-value=0.00097  Score=53.46  Aligned_cols=216  Identities=11%  Similarity=0.012  Sum_probs=133.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE----EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV----ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~----~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      .+++|.+ ++.|..+. .++ .|...+++.......    .......+..|++.+.++.|. +-...+.|...++.....
T Consensus        86 ~~~~~s~-d~~l~~~s-~dg-~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~-sgs~d~~i~iwd~~~~~~  161 (344)
T 4gqb_B           86 ADLTWVG-ERGILVAS-DSG-AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAV-SGSKDICIKVWDLAQQVV  161 (344)
T ss_dssp             EEEEEET-TTEEEEEE-TTS-EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEE
T ss_pred             EEEEEeC-CCeEEEEE-CCC-EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCcE
Confidence            4688887 46665444 445 788888875432111    222345788999998666555 555667899999887665


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-cCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-AADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                      ...+..+......+++.+.+..++.+-..  .+.|...++........+. ......+..+++++.++.++.+-...+.|
T Consensus       162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v  239 (344)
T 4gqb_B          162 LSSYRAHAAQVTCVAASPHKDSVFLSCSE--DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV  239 (344)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEET--TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred             EEEEcCcCCceEEEEecCCCCCceeeecc--ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence            55555556677899999866667666543  3568888876554333221 11134567899999878777776677888


Q ss_pred             EEEecCCCce-EEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751         158 ECMTIRNRVR-RKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       158 ~~~~~~g~~~-~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      ...++...+. ..+........++++.  +..+..+-...+.|...+......  +.+ ..+......|+.-+
T Consensus       240 ~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~--~~~-~~H~~~V~~v~~sp  309 (344)
T 4gqb_B          240 SLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL--FRS-QAHRDFVRDATWSP  309 (344)
T ss_dssp             EEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE--EEE-CCCSSCEEEEEECS
T ss_pred             EEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE--EEE-cCCCCCEEEEEEeC
Confidence            8888875543 3333344445677774  335556655667777777664432  222 23344456666543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=98.26  E-value=0.00013  Score=63.95  Aligned_cols=199  Identities=9%  Similarity=-0.025  Sum_probs=117.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC------------------CccEEEEeecCCeEEEEeCCC
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR------------------SPEGLTFDWVNRVLYWTDSQM   65 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~------------------~p~gl~~d~~~~~ly~~d~~~   65 (232)
                      .++|++..+.|.++..  + .|+.+++++.....+......                  ...++++.+.++.|+++....
T Consensus       118 ~~~~SPdG~~la~~~~--~-~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~  194 (723)
T 1xfd_A          118 YAGWGPKGQQLIFIFE--N-NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND  194 (723)
T ss_dssp             BCCBCSSTTCEEEEET--T-EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred             ccEECCCCCEEEEEEC--C-eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence            4567777777766654  4 789998887655444433221                  236788988888887764221


Q ss_pred             ---------------------------------CeEEEEeCCCCCCEEEEeCC------CCCceEEEEeCCCCeEEEE-E
Q psy5751          66 ---------------------------------DTISMANLNDDQPKVIVSKD------LVNPRGIVVHPYYRKLFWS-D  105 (232)
Q Consensus        66 ---------------------------------~~I~~~~~~g~~~~~~~~~~------~~~p~~iavd~~~~~ly~~-d  105 (232)
                                                       ..|++.++++......+...      ......++.+|.+..|+.. +
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~  274 (723)
T 1xfd_A          195 SRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN  274 (723)
T ss_dssp             TTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE
T ss_pred             CccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEc
Confidence                                             16777888776542222211      2234568899855555333 3


Q ss_pred             cCCCCCcEEEEeCCCCCcEEEEEcCCCCC----cceEEEeCCCCEEEEE-ECCCC------cEEEEe-cCCCc---eEEE
Q psy5751         106 WNRSGPKIEWSNLDGTDREIFLKAADLKL----PNSLAVDFRTDELCWV-DADSK------SLECMT-IRNRV---RRKV  170 (232)
Q Consensus       106 ~~~~~~~I~~~~~~g~~~~~~~~~~~~~~----p~~l~~d~~~~~Ly~~-d~~~~------~i~~~~-~~g~~---~~~~  170 (232)
                      .......|+..++++.....+........    +..+++++++..|+++ ....+      +|+.++ .+++.   .+.+
T Consensus       275 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l  354 (723)
T 1xfd_A          275 RAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSI  354 (723)
T ss_dssp             TTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBS
T ss_pred             CCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEe
Confidence            22234568888988776555543210111    2478999998888886 44333      788888 56555   4433


Q ss_pred             ecC-CCceEEEEE--ECCEEEEEeCC----CCcEEEEeCCCC
Q psy5751         171 YSN-CTYPFGLSI--TDEKYYWTDWK----TNRIESANKEGE  205 (232)
Q Consensus       171 ~~~-~~~p~gla~--~~~~ly~td~~----~~~i~~~~~~g~  205 (232)
                      ... ......+++  ++..||++...    ...|++++..|.
T Consensus       355 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~  396 (723)
T 1xfd_A          355 TSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN  396 (723)
T ss_dssp             CCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred             ecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence            322 111222466  36688877543    356888887654

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=98.25  E-value=2.2e-05  Score=66.60  Aligned_cols=113  Identities=12%  Similarity=0.088  Sum_probs=83.5

Q ss_pred             CCCCccEEEEeecCCeEEEEeCC---------------------CCeEEEEeCCCCCC-------EEEEe----------
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQ---------------------MDTISMANLNDDQP-------KVIVS----------   83 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~---------------------~~~I~~~~~~g~~~-------~~~~~----------   83 (232)
                      .+..|+++++++.++.||++-+.                     .++|++...++...       ..++.          
T Consensus       382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~  461 (592)
T 4a9v_A          382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT  461 (592)
T ss_dssp             CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred             cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence            45689999999999999998543                     27899987755321       22221          


Q ss_pred             -----------CCCCCceEEEEeCCCCeEEE-EEcCC---------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751          84 -----------KDLVNPRGIVVHPYYRKLFW-SDWNR---------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        84 -----------~~~~~p~~iavd~~~~~ly~-~d~~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~  142 (232)
                                 ..++.|.+|++|+ .|.||+ +|...         ....+++.+.+......++.......|+|+++++
T Consensus       462 ~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP  540 (592)
T 4a9v_A          462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP  540 (592)
T ss_dssp             GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred             cccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC
Confidence                       1378999999998 789999 77531         2347899988766677666654356799999999


Q ss_pred             CCCEEEEEECCCC
Q psy5751         143 RTDELCWVDADSK  155 (232)
Q Consensus       143 ~~~~Ly~~d~~~~  155 (232)
                      +...||++-.+-+
T Consensus       541 D~ktLfV~vQHPG  553 (592)
T 4a9v_A          541 DQKTLFVGIQHPG  553 (592)
T ss_dssp             TSSEEEEEEESTT
T ss_pred             CCCEEEEEEeCCC
Confidence            9999999976544

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=98.24  E-value=0.0003  Score=57.14  Aligned_cols=199  Identities=11%  Similarity=0.028  Sum_probs=123.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCC----CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDG----KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g----~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      ..+++|++....|+.+.. ++ .|...++..    ......+......+..+++.+.++.++++-...+.|...++....
T Consensus        70 v~~~~~s~~~~~l~~~~~-dg-~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  147 (416)
T 2pm9_A           70 FNDLDWSHNNKIIAGALD-NG-SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT  147 (416)
T ss_dssp             EEEEEECSSSSCEEEEES-SS-CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred             eEEEEECCCCCeEEEEcc-CC-eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence            357889886666655543 44 688888875    222223333446788999988645555576677889999987764


Q ss_pred             ------CEEEE---eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-----CCCcceEEEeCC
Q psy5751          78 ------PKVIV---SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-----LKLPNSLAVDFR  143 (232)
Q Consensus        78 ------~~~~~---~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-----~~~p~~l~~d~~  143 (232)
                            .....   .........++++|..+.++++...  .+.|...++........+....     ......+++++.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  225 (416)
T 2pm9_A          148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS--SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK  225 (416)
T ss_dssp             SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS--SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred             cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC--CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC
Confidence                  22221   1244567899999864666666543  4568888887654433333210     245689999998


Q ss_pred             CCEEEEEECCCC---cEEEEecCCC-ce-EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCC
Q psy5751         144 TDELCWVDADSK---SLECMTIRNR-VR-RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       144 ~~~Ly~~d~~~~---~i~~~~~~g~-~~-~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +..++++-...+   .|...+++.. .. ..+. ........+++.  ++.++++-...+.|...+...
T Consensus       226 ~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~  294 (416)
T 2pm9_A          226 NSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES  294 (416)
T ss_dssp             CTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred             CCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence            655555545454   7888888754 22 2222 233445677873  455666656667788888763

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=98.23  E-value=0.0001  Score=67.75  Aligned_cols=179  Identities=7%  Similarity=0.033  Sum_probs=120.1

Q ss_pred             EEEEEe-CCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC-CccEEEEeecCCeEEEEeCCCCeEE-EEeCCCCCCE
Q psy5751           3 IGITVD-CVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR-SPEGLTFDWVNRVLYWTDSQMDTIS-MANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d-~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~-~p~gl~~d~~~~~ly~~d~~~~~I~-~~~~~g~~~~   79 (232)
                      .+++|+ +....|.++.  .. .|+.+++.+.....+ ..... .+..+++. .++.|+++.. ...|+ ..++++....
T Consensus       299 ~~~~~S~pdG~~la~~~--~~-~i~~~~~~~~~~~~~-~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~  372 (1045)
T 1k32_A          299 FAEDFSPLDGDLIAFVS--RG-QAFIQDVSGTYVLKV-PEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAE  372 (1045)
T ss_dssp             GEEEEEECGGGCEEEEE--TT-EEEEECTTSSBEEEC-SCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEE
T ss_pred             ceeeecCCCCCEEEEEE--cC-EEEEEcCCCCceEEc-cCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCce
Confidence            367788 8777776665  34 788888876554332 22112 34555555 4566776655 56888 8898887655


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC------
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD------  153 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~------  153 (232)
                      .+. .....+..++++|.++.|+++..   ...|+..++++.....+.... ......+++++++.+|.++...      
T Consensus       373 ~l~-~~~~~~~~~~~SpDG~~la~~~~---~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~  447 (1045)
T 1k32_A          373 KFE-ENLGNVFAMGVDRNGKFAVVAND---RFEIMTVDLETGKPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETD  447 (1045)
T ss_dssp             ECC-CCCCSEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred             Eec-CCccceeeeEECCCCCEEEEECC---CCeEEEEECCCCceEEeccCC-CCCccceEECCCCCeEEEEecCcccccc
Confidence            544 44567789999997777877764   357999999877766665442 3445889999998888777542      


Q ss_pred             ---CCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC
Q psy5751         154 ---SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW  192 (232)
Q Consensus       154 ---~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~  192 (232)
                         ...|+..+++++....+.........+++.  +..||++..
T Consensus       448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~  491 (1045)
T 1k32_A          448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY  491 (1045)
T ss_dssp             SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred             CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence               258999999877654444445556677773  557887765

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.22  E-value=0.00026  Score=57.11  Aligned_cols=182  Identities=8%  Similarity=-0.011  Sum_probs=111.1

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEee-cCCeEEEEeCC-C----CeEEEEeCCCCCCEEEEeCC-CCCceEEEEeC
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDW-VNRVLYWTDSQ-M----DTISMANLNDDQPKVIVSKD-LVNPRGIVVHP   96 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~-~~~~ly~~d~~-~----~~I~~~~~~g~~~~~~~~~~-~~~p~~iavd~   96 (232)
                      .|+.+++++.....+.. .......+++.+ .++.|+++... .    .+|+.+++++...+.+.... ...+..++++|
T Consensus       169 ~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp  247 (396)
T 3c5m_A          169 RLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP  247 (396)
T ss_dssp             EEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT
T ss_pred             eEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC
Confidence            68888888765544443 234567778877 56666665433 2    47999999887655554321 22456788998


Q ss_pred             CCCeEEEEEcCCCCCc--EEEEeCCCCCcEEEEEcCCCCCcceEEEeC-CCCEEEEEEC---------------CCCcEE
Q psy5751          97 YYRKLFWSDWNRSGPK--IEWSNLDGTDREIFLKAADLKLPNSLAVDF-RTDELCWVDA---------------DSKSLE  158 (232)
Q Consensus        97 ~~~~ly~~d~~~~~~~--I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~-~~~~Ly~~d~---------------~~~~i~  158 (232)
                      .++.|+++........  |+..++++.....+....   ... +++++ ++..|+++..               ....|+
T Consensus       248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~  323 (396)
T 3c5m_A          248 DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY  323 (396)
T ss_dssp             TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred             CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence            7777777644323344  999999877655554332   223 78888 7665554321               346899


Q ss_pred             EEecCCCceEEEecCCC-----------ceEEEEE--ECCEEEEEeCC--CCcEEEEeCCCCCcceE
Q psy5751         159 CMTIRNRVRRKVYSNCT-----------YPFGLSI--TDEKYYWTDWK--TNRIESANKEGERAPSI  210 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~-----------~p~gla~--~~~~ly~td~~--~~~i~~~~~~g~~~~~i  210 (232)
                      .++++++..+.+.....           ....+++  ++..|+++...  ...|+.++..+...+++
T Consensus       324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~  390 (396)
T 3c5m_A          324 VLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLE  390 (396)
T ss_dssp             EEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred             EEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccc
Confidence            99998776655533221           1233455  35577777543  34688888887766644

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=98.21  E-value=9.2e-05  Score=60.19  Aligned_cols=159  Identities=12%  Similarity=0.002  Sum_probs=104.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------CCCccEEEEeecCCeEEEEeCCCC---eEEEEeC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------IRSPEGLTFDWVNRVLYWTDSQMD---TISMANL   73 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------~~~p~gl~~d~~~~~ly~~d~~~~---~I~~~~~   73 (232)
                      .+++|++..+.++++-..++ .|...++........+...      ...+..+++.+.+..++++-...+   .|...++
T Consensus       169 ~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~  247 (416)
T 2pm9_A          169 ISLAWNQSLAHVFASAGSSN-FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL  247 (416)
T ss_dssp             CEEEECSSCTTEEEEESSSS-CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred             eEEEeCCCCCcEEEEEcCCC-CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence            47888886456666655666 7999999875543333332      456888999987655666655555   8999998


Q ss_pred             CCC-CCEEEEe-CCCCCceEEEEeC-CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751          74 NDD-QPKVIVS-KDLVNPRGIVVHP-YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        74 ~g~-~~~~~~~-~~~~~p~~iavd~-~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      ... .....+. .....+..++++| ....|+....   .+.|...++........+... ......+++++++..++.+
T Consensus       248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---dg~v~~wd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s  323 (416)
T 2pm9_A          248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR---DNTVLLWNPESAEQLSQFPAR-GNWCFKTKFAPEAPDLFAC  323 (416)
T ss_dssp             TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES---SSEEEEECSSSCCEEEEEECS-SSCCCCEEECTTCTTEEEE
T ss_pred             CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC---CCCEEEeeCCCCccceeecCC-CCceEEEEECCCCCCEEEE
Confidence            764 3323332 3455678999998 4444444442   456888888765544434332 4567899999986466677


Q ss_pred             ECCCCcEEEEecCCCc
Q psy5751         151 DADSKSLECMTIRNRV  166 (232)
Q Consensus       151 d~~~~~i~~~~~~g~~  166 (232)
                      -...+.|...+++...
T Consensus       324 ~~~d~~i~iw~~~~~~  339 (416)
T 2pm9_A          324 ASFDNKIEVQTLQNLT  339 (416)
T ss_dssp             CCSSSEEEEEESCCCC
T ss_pred             EecCCcEEEEEccCCC
Confidence            6777888888887543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=98.21  E-value=0.0027  Score=56.35  Aligned_cols=197  Identities=7%  Similarity=-0.066  Sum_probs=127.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-CCEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-QPKV   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~~~   80 (232)
                      ..+++|++..+.|..+.. ++ .|...+++.......+......+..+++.+.+..|+.+. ..+.|...+++.. ....
T Consensus        58 v~~~~~s~~~~~l~~~~~-dg-~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~  134 (814)
T 3mkq_A           58 VRAGKFIARKNWIIVGSD-DF-RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNWALEQ  134 (814)
T ss_dssp             EEEEEEEGGGTEEEEEET-TS-EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTSEEEE
T ss_pred             EEEEEEeCCCCEEEEEeC-CC-eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCceEEE
Confidence            357889987777776654 45 799999886554444444456788999998777776444 5578999998876 3334


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC--CCCEEEEEECCCCcEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF--RTDELCWVDADSKSLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~--~~~~Ly~~d~~~~~i~  158 (232)
                      .+.........++++|.++.++++...  .+.|...++...................+++.+  ++..| ++-...+.|.
T Consensus       135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~i~  211 (814)
T 3mkq_A          135 TFEGHEHFVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM-ITASDDLTIK  211 (814)
T ss_dssp             EEECCSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEE-EEECTTSEEE
T ss_pred             EEcCCCCcEEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEE-EEEeCCCEEE
Confidence            444455667899999844545544433  456888888655444333332136678899988  54444 4546678888


Q ss_pred             EEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         159 CMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       159 ~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ..++.......... .......+++. ++.++++-...+.|...+...
T Consensus       212 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~  259 (814)
T 3mkq_A          212 IWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST  259 (814)
T ss_dssp             EEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred             EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence            88887655433332 34445677774 444555555567788777764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.20  E-value=9.4e-05  Score=59.71  Aligned_cols=202  Identities=9%  Similarity=0.031  Sum_probs=114.9

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCC-CccE--EE----------------EeecCCeEEEEe---
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIR-SPEG--LT----------------FDWVNRVLYWTD---   62 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~-~p~g--l~----------------~d~~~~~ly~~d---   62 (232)
                      +.|.+..+.|+++... . .|+.+++++.....+...... .+.|  |+                +.+.++.+++..   
T Consensus        86 ~~~spdg~~l~~~~~~-~-~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~  163 (396)
T 3c5m_A           86 GFISTDERAFFYVKNE-L-NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH  163 (396)
T ss_dssp             CEECTTSSEEEEEETT-T-EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred             ceECCCCCEEEEEEcC-C-cEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence            4577777788776643 3 588899887665444432111 1111  11                111122222222   


Q ss_pred             -CCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeC-CCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCCCCCcce
Q psy5751          63 -SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHP-YYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAADLKLPNS  137 (232)
Q Consensus        63 -~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~-~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~~~~p~~  137 (232)
                       .....|+++++++.....+.. .......++++| .++.|+++.....   ..+|+.+++++.....+........+..
T Consensus       164 ~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~  242 (396)
T 3c5m_A          164 TNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTH  242 (396)
T ss_dssp             TCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEE
T ss_pred             CCCcceEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccc
Confidence             234578888988766555554 334567788888 4566766653211   1579999998876554433210223567


Q ss_pred             EEEeCCCCEEEEEEC--CCCc--EEEEecCCCceEEEecCCCceEEEEEE--CCEEEEE-e---------------CCCC
Q psy5751         138 LAVDFRTDELCWVDA--DSKS--LECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWT-D---------------WKTN  195 (232)
Q Consensus       138 l~~d~~~~~Ly~~d~--~~~~--i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~t-d---------------~~~~  195 (232)
                      +++++++.+|+++..  ....  |+.++++++..+.+......  .+++.  ++.++++ .               ....
T Consensus       243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~--~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~  320 (396)
T 3c5m_A          243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC--SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP  320 (396)
T ss_dssp             EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE--EEEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred             eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC--CCCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence            899999887877733  2334  99999987766555432111  14442  3444443 2               1346


Q ss_pred             cEEEEeCCCCCcceEE
Q psy5751         196 RIESANKEGERAPSIA  211 (232)
Q Consensus       196 ~i~~~~~~g~~~~~i~  211 (232)
                      .|+.++..+...+.+.
T Consensus       321 ~i~~~d~~~~~~~~l~  336 (396)
T 3c5m_A          321 FLYVLNTKAKSAQKLC  336 (396)
T ss_dssp             EEEEEETTTTBCCEEE
T ss_pred             cEEEEecccCceEEcc
Confidence            7888988766555444

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.19  E-value=0.0019  Score=57.17  Aligned_cols=203  Identities=12%  Similarity=0.094  Sum_probs=123.5

Q ss_pred             EEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-------------Ce
Q psy5751           4 GITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-------------DT   67 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-------------~~   67 (232)
                      ++.|.+..+.|.++....+   ..|+.+++++........... ...+++..+. +.||++....             ..
T Consensus       167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~  244 (741)
T 1yr2_A          167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQT  244 (741)
T ss_dssp             EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCE
T ss_pred             eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCE
Confidence            6788888888766543222   269999999776433322211 1246777776 7788876432             35


Q ss_pred             EEEEeCCCCCC--EEEEeCCCC--CceEEEEeCCCCeEEEEEcCC--CCCcEEEEeCCCC--C-cEEEEEcCCCCCcceE
Q psy5751          68 ISMANLNDDQP--KVIVSKDLV--NPRGIVVHPYYRKLFWSDWNR--SGPKIEWSNLDGT--D-REIFLKAADLKLPNSL  138 (232)
Q Consensus        68 I~~~~~~g~~~--~~~~~~~~~--~p~~iavd~~~~~ly~~d~~~--~~~~I~~~~~~g~--~-~~~~~~~~~~~~p~~l  138 (232)
                      |++.++.+...  ..+......  ...+++++|.++.|+++....  ....|+..++++.  . .+.+...  .......
T Consensus       245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~~~~  322 (741)
T 1yr2_A          245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD--LKAQWDF  322 (741)
T ss_dssp             EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS--SSSCEEE
T ss_pred             EEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC--CCceEEE
Confidence            88888866542  344442221  246888998777788776542  2568999998776  4 4444433  2222222


Q ss_pred             EEeCCCCEEEEEECC---CCcEEEEecCCC--ceEEEec-CCCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751         139 AVDFRTDELCWVDAD---SKSLECMTIRNR--VRRKVYS-NCTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSI  210 (232)
Q Consensus       139 ~~d~~~~~Ly~~d~~---~~~i~~~~~~g~--~~~~~~~-~~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i  210 (232)
                       +++++++||+....   ..+|+.+++++.  ..+.+.. ......++++.++.|+++....  .+|+.++.+|+..+.+
T Consensus       323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l  401 (741)
T 1yr2_A          323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAV  401 (741)
T ss_dssp             -EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred             -EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence             45677888887542   467999999874  3344433 2223456777788888875443  4677777766644444


Q ss_pred             E
Q psy5751         211 A  211 (232)
Q Consensus       211 ~  211 (232)
                      .
T Consensus       402 ~  402 (741)
T 1yr2_A          402 S  402 (741)
T ss_dssp             B
T ss_pred             c
Confidence            3

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.14  E-value=0.00032  Score=55.24  Aligned_cols=178  Identities=12%  Similarity=0.119  Sum_probs=106.3

Q ss_pred             EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCC
Q psy5751           6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKD   85 (232)
Q Consensus         6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~   85 (232)
                      ..+. ++.||++.. ++ .|+.++.+|....... ........+++|. .+.||++.   +.|++++.+|...- .....
T Consensus       143 ~~~~-~g~l~vgt~-~~-~l~~~d~~g~~~~~~~-~~~~~~~~~~~d~-~g~l~v~t---~~l~~~d~~g~~~~-~~~~~  213 (330)
T 3hxj_A          143 IVSE-DGTIYVGSN-DN-YLYAINPDGTEKWRFK-TNDAITSAASIGK-DGTIYFGS---DKVYAINPDGTEKW-NFYAG  213 (330)
T ss_dssp             EECT-TSCEEEECT-TS-EEEEECTTSCEEEEEE-CSSCCCSCCEECT-TCCEEEES---SSEEEECTTSCEEE-EECCS
T ss_pred             EEcC-CCEEEEEcC-CC-EEEEECCCCCEeEEEe-cCCCceeeeEEcC-CCEEEEEe---CEEEEECCCCcEEE-EEccC
Confidence            3443 556766543 34 6888888854433332 2234566677876 56788877   68999995554322 22223


Q ss_pred             CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751          86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR  165 (232)
Q Consensus        86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~  165 (232)
                      .....++++++ +|.||++...   +.+.+++.+|.........  ...+..+.++.. +.||++.. .+.+.+++.+|.
T Consensus       214 ~~~~~~~~~~~-~g~l~v~t~~---~gl~~~~~~g~~~~~~~~~--~~~~~~~~~~~~-g~l~v~t~-~ggl~~~d~~g~  285 (330)
T 3hxj_A          214 YWTVTRPAISE-DGTIYVTSLD---GHLYAINPDGTEKWRFKTG--KRIESSPVIGNT-DTIYFGSY-DGHLYAINPDGT  285 (330)
T ss_dssp             SCCCSCCEECT-TSCEEEEETT---TEEEEECTTSCEEEEEECS--SCCCSCCEECTT-SCEEEECT-TCEEEEECTTSC
T ss_pred             CcceeceEECC-CCeEEEEcCC---CeEEEECCCCCEeEEeeCC--CCccccceEcCC-CeEEEecC-CCCEEEECCCCc
Confidence            34577888996 6799998753   4588887666544333222  334566777754 78988753 567999988665


Q ss_pred             ceEEEecCCCceEEEEE-ECCEEEEEeCCCCcEEEEe
Q psy5751         166 VRRKVYSNCTYPFGLSI-TDEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       166 ~~~~~~~~~~~p~gla~-~~~~ly~td~~~~~i~~~~  201 (232)
                      .............+++. .++.||+.... +.+....
T Consensus       286 ~~~~~~~~~~~~~~~~~d~~g~l~~gt~~-G~~~~~~  321 (330)
T 3hxj_A          286 EKWNFETGSWIIATPVIDENGTIYFGTRN-GKFYALF  321 (330)
T ss_dssp             EEEEEECSSCCCSCCEECTTCCEEEECTT-SCEEEEE
T ss_pred             EEEEEEcCCccccceEEcCCCEEEEEcCC-CeEEEEe
Confidence            44333222233445666 47788886543 4444333

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=98.13  E-value=0.00021  Score=59.07  Aligned_cols=196  Identities=13%  Similarity=0.044  Sum_probs=119.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      ..+++|++.+..+..+-..++ .|...+++......++.  ..-..+.+|++.+.++.++++-...+.|...|+.+....
T Consensus       122 V~~l~~~P~~~~~lasGs~dg-~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~  200 (435)
T 4e54_B          122 ATSLAWHPTHPSTVAVGSKGG-DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR  200 (435)
T ss_dssp             EEEEEECSSCTTCEEEEETTS-CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred             EEEEEEeCCCCCEEEEEeCCC-EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence            357999986666555555555 79988887655433332  234578899998755556667777789999999887665


Q ss_pred             EEEeCC--CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          80 VIVSKD--LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        80 ~~~~~~--~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                      .+....  ......+++++....|.....   .+.|...++++.....+...  -....++++++.+..++.+-...+.|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~~~~~~~~~~h--~~~v~~v~~~p~~~~~~~s~s~d~~v  275 (435)
T 4e54_B          201 VFASSDTINIWFCSLDVSASSRMVVTGDN---VGNVILLNMDGKELWNLRMH--KKKVTHVALNPCCDWFLATASVDQTV  275 (435)
T ss_dssp             EEECCSSCSCCCCCEEEETTTTEEEEECS---SSBEEEEESSSCBCCCSBCC--SSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred             EEeccCCCCccEEEEEECCCCCEEEEEeC---CCcEeeeccCcceeEEEecc--cceEEeeeecCCCceEEEEecCccee
Confidence            555422  223467889985554444432   46788888887643322111  34567899999877777766666777


Q ss_pred             EEEecCCCce-EEEecC---CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         158 ECMTIRNRVR-RKVYSN---CTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       158 ~~~~~~g~~~-~~~~~~---~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ...++..... ..+...   .....++++. ++...++-...+.|...+..
T Consensus       276 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~  326 (435)
T 4e54_B          276 KIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS  326 (435)
T ss_dssp             CEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred             eEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence            7777764322 122211   1223455553 33344444445666666654

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=98.12  E-value=0.0022  Score=51.81  Aligned_cols=192  Identities=6%  Similarity=-0.046  Sum_probs=122.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCC---------------ccEEEEeecCCeEEEEeCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRS---------------PEGLTFDWVNRVLYWTDSQMD   66 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~---------------p~gl~~d~~~~~ly~~d~~~~   66 (232)
                      ..+++|++..+.|+.+.. ++ .|..+++........+......               +..+++.+ .+. +++-...+
T Consensus       152 v~~~~~~~~~~~l~~~~~-d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~g  227 (425)
T 1r5m_A          152 IVSVKWNKDGTHIISMDV-EN-VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDK-FVIPGPKG  227 (425)
T ss_dssp             EEEEEECTTSSEEEEEET-TC-CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE-TTE-EEEECGGG
T ss_pred             EEEEEECCCCCEEEEEec-CC-eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-CCE-EEEEcCCC
Confidence            357889887777776654 34 6888888755433333222222               67778876 344 44556668


Q ss_pred             eEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751          67 TISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        67 ~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~  146 (232)
                      .|...++........+.........++++|....|+.+..   .+.|...++........+... -.....+++++++  
T Consensus       228 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~--  301 (425)
T 1r5m_A          228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD---DGTLRIWHGGNGNSQNCFYGH-SQSIVSASWVGDD--  301 (425)
T ss_dssp             CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET---TSCEEEECSSSBSCSEEECCC-SSCEEEEEEETTT--
T ss_pred             eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC---CCEEEEEECCCCccceEecCC-CccEEEEEECCCC--
Confidence            8999998876655555445566789999986666655553   356888887755433333322 4567899999975  


Q ss_pred             EEEEECCCCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         147 LCWVDADSKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ++++-...+.|...+++......... .......+++. ++.++++-...+.|...+..
T Consensus       302 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~  360 (425)
T 1r5m_A          302 KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK  360 (425)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred             EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence            55555667889999987655433333 34456677875 44445554556778888776

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=98.11  E-value=0.002  Score=51.05  Aligned_cols=198  Identities=9%  Similarity=0.004  Sum_probs=124.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+++|++..+.|+.+. .++ .|...++........+......+.++++.+.++.|+ +-...+.|...++........
T Consensus        35 v~~~~~s~~~~~l~~~~-~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~  111 (369)
T 3zwl_B           35 LTQVKYNKEGDLLFSCS-KDS-SASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCV-TGSADYSIKLWDVSNGQCVAT  111 (369)
T ss_dssp             EEEEEECTTSCEEEEEE-SSS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTTEEEEEETTTCCEEEE
T ss_pred             EEEEEEcCCCCEEEEEe-CCC-EEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCcEEEE
Confidence            35789998666666555 344 688888876554444544456788999988666665 444568899999987766555


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcC--CCCCcEEEEeCCCCC------------cEEEEEcCCCCCcceEEEeCCCCEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWN--RSGPKIEWSNLDGTD------------REIFLKAADLKLPNSLAVDFRTDEL  147 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~--~~~~~I~~~~~~g~~------------~~~~~~~~~~~~p~~l~~d~~~~~L  147 (232)
                      +. ....+..++++|.+..|+.+...  ...+.|...++....            ...+...........+++++++..|
T Consensus       112 ~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  190 (369)
T 3zwl_B          112 WK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYI  190 (369)
T ss_dssp             EE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEE
T ss_pred             ee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEE
Confidence            55 45578899999966666655432  112456666654332            1111111112267889999986666


Q ss_pred             EEEECCCCcEEEEecCC-Cce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         148 CWVDADSKSLECMTIRN-RVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       148 y~~d~~~~~i~~~~~~g-~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +.+ ...+.|...+++. ... ..+........++++. ++.++++-...+.|...+...
T Consensus       191 ~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~  249 (369)
T 3zwl_B          191 IAG-HKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST  249 (369)
T ss_dssp             EEE-ETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EEE-cCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence            655 4567899988886 332 2223344456678874 444444545567788888764

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=98.11  E-value=0.0022  Score=51.59  Aligned_cols=197  Identities=11%  Similarity=0.014  Sum_probs=119.7

Q ss_pred             eEEEEEe----CCCCE-EEEEEcCCCCcEEEEEcCC-------Ccee-----EEE------eCCCCCccEEEEeecCCeE
Q psy5751           2 LIGITVD----CVEGQ-VYYSSVADKSSIKRAHLDG-------KNVE-----DVI------TTNIRSPEGLTFDWVNRVL   58 (232)
Q Consensus         2 ~~~i~~d----~~~~~-ly~~d~~~~~~i~~~~~~g-------~~~~-----~~~------~~~~~~p~gl~~d~~~~~l   58 (232)
                      ..+++|.    +..+. |+.+.. ++ .|...++..       ....     .+.      ......+..+++.+.+  +
T Consensus       124 v~~~~~~~~~~~~~~~~l~~~~~-dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~  199 (397)
T 1sq9_A          124 FWALKWGASNDRLLSHRLVATDV-KG-TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--L  199 (397)
T ss_dssp             EEEEEEECCC----CEEEEEEET-TS-CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--E
T ss_pred             EEEEEEeeccCCCCceEEEEEeC-CC-cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--e
Confidence            3578888    76666 555543 44 677777664       2222     232      2234578899999855  5


Q ss_pred             EEEeCCCCeEEEEeCCCCCCEEEEeC---C---CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--
Q psy5751          59 YWTDSQMDTISMANLNDDQPKVIVSK---D---LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--  130 (232)
Q Consensus        59 y~~d~~~~~I~~~~~~g~~~~~~~~~---~---~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--  130 (232)
                      +++-...+.|...++........+..   .   ......++++|....|+.+......+.|...++........+...  
T Consensus       200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~  279 (397)
T 1sq9_A          200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH  279 (397)
T ss_dssp             EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred             EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence            56667778999999986554444443   3   567789999986666655543211156888888755443333320  


Q ss_pred             ----------CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-------C---------------CCceE
Q psy5751         131 ----------DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-------N---------------CTYPF  178 (232)
Q Consensus       131 ----------~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-------~---------------~~~p~  178 (232)
                                .-.....+++++++..|+.+ ...+.|...++..........       .               .....
T Consensus       280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~  358 (397)
T 1sq9_A          280 SSQASLGEFAHSSWVMSLSFNDSGETLCSA-GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF  358 (397)
T ss_dssp             ------CCBSBSSCEEEEEECSSSSEEEEE-ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred             cccccccccccCCcEEEEEECCCCCEEEEE-eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCcee
Confidence                      14566899999986666554 467788888887654433322       2               34456


Q ss_pred             EEEEECC-----------EEEEEeCCCCcEEEEeCC
Q psy5751         179 GLSITDE-----------KYYWTDWKTNRIESANKE  203 (232)
Q Consensus       179 gla~~~~-----------~ly~td~~~~~i~~~~~~  203 (232)
                      ++++..+           .++++-...+.|...+..
T Consensus       359 ~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~  394 (397)
T 1sq9_A          359 DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA  394 (397)
T ss_dssp             EEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred             EEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence            8888633           456665556767666554

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.10  E-value=0.0043  Score=54.54  Aligned_cols=203  Identities=17%  Similarity=0.165  Sum_probs=123.3

Q ss_pred             EEEEeCCCCEEEEE-EcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC------------CCeE
Q psy5751           4 GITVDCVEGQVYYS-SVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ------------MDTI   68 (232)
Q Consensus         4 ~i~~d~~~~~ly~~-d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~------------~~~I   68 (232)
                      ++++.+..+.|.++ +....  ..|+.+++++........... ...+++.. .++.||++...            ...|
T Consensus       133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v  210 (693)
T 3iuj_A          133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKV  210 (693)
T ss_dssp             EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred             EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence            67888877777555 43332  368999998766433322211 12344554 47778877544            2468


Q ss_pred             EEEeCCCCCC--EEEEeCCC---CCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCC--CcEEEEEcCCCCCcceEEE
Q psy5751          69 SMANLNDDQP--KVIVSKDL---VNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGT--DREIFLKAADLKLPNSLAV  140 (232)
Q Consensus        69 ~~~~~~g~~~--~~~~~~~~---~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~--~~~~~~~~~~~~~p~~l~~  140 (232)
                      ++.++.....  ..+.....   ..-.+++++|.++.|+++.... ....|+..++++.  ....+...  ...-.. .+
T Consensus       211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~--~~~~~~-~~  287 (693)
T 3iuj_A          211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD--LDADVS-LV  287 (693)
T ss_dssp             EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS--SSSCEE-EE
T ss_pred             EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC--CCceEE-EE
Confidence            8888876543  34444222   1235788999888887775432 2358999998765  33444332  111112 25


Q ss_pred             eCCCCEEEEEECC---CCcEEEEecCCCce---EEEec-CCCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceEE
Q psy5751         141 DFRTDELCWVDAD---SKSLECMTIRNRVR---RKVYS-NCTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSIA  211 (232)
Q Consensus       141 d~~~~~Ly~~d~~---~~~i~~~~~~g~~~---~~~~~-~~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i~  211 (232)
                      ++++++||+.-..   ..+|+.+++++...   +.+.. ..... +++.++++|+++....  .+|..++.+|...+.+.
T Consensus       288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~  366 (693)
T 3iuj_A          288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA  366 (693)
T ss_dssp             EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred             eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence            6667888887543   46899999987654   44433 22223 7777888888875544  36888888876655554


Q ss_pred             e
Q psy5751         212 L  212 (232)
Q Consensus       212 ~  212 (232)
                      +
T Consensus       367 ~  367 (693)
T 3iuj_A          367 L  367 (693)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.08  E-value=0.0017  Score=57.03  Aligned_cols=202  Identities=10%  Similarity=0.101  Sum_probs=123.8

Q ss_pred             EEEEEeCCCCEEEEEEc-CCC--CcEEEEEcCCCceeEEEeCCCCCc--cEEEEeecCCeEEEEeCCC------------
Q psy5751           3 IGITVDCVEGQVYYSSV-ADK--SSIKRAHLDGKNVEDVITTNIRSP--EGLTFDWVNRVLYWTDSQM------------   65 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~-~~~--~~i~~~~~~g~~~~~~~~~~~~~p--~gl~~d~~~~~ly~~d~~~------------   65 (232)
                      .+++|.+..+.|.++.. ...  ..|+.+++++.....  ...+...  .+++..+.++.||++....            
T Consensus       124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~  201 (695)
T 2bkl_A          124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGY  201 (695)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred             EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence            36788988887765543 221  379999999765420  1112222  6788888788888886532            


Q ss_pred             CeEEEEeCCCCCC--EEEEeCCC--CCceEEEEeCCCCeEEEEEcCC-CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEE
Q psy5751          66 DTISMANLNDDQP--KVIVSKDL--VNPRGIVVHPYYRKLFWSDWNR-SGPKIEWSNLDGTDREIFLKAADLKLPNSLAV  140 (232)
Q Consensus        66 ~~I~~~~~~g~~~--~~~~~~~~--~~p~~iavd~~~~~ly~~d~~~-~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~  140 (232)
                      ..|++.++.+...  ..+.....  ....+++++|.++.|+++.... ....|+..+..+...+.+....  ........
T Consensus       202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~--~~~~~~~~  279 (695)
T 2bkl_A          202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV--GAKYEVHA  279 (695)
T ss_dssp             CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS--SCCEEEEE
T ss_pred             CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC--CceEEEEe
Confidence            3499999987653  34444221  2345888999888888776543 3457888876555555555432  22233333


Q ss_pred             eCCCCEEEEEEC---CCCcEEEEecCCCce---EEEec-C-CCceEEEEEECCEEEEEeCCC--CcEEEEeCCCCCcceE
Q psy5751         141 DFRTDELCWVDA---DSKSLECMTIRNRVR---RKVYS-N-CTYPFGLSITDEKYYWTDWKT--NRIESANKEGERAPSI  210 (232)
Q Consensus       141 d~~~~~Ly~~d~---~~~~i~~~~~~g~~~---~~~~~-~-~~~p~gla~~~~~ly~td~~~--~~i~~~~~~g~~~~~i  210 (232)
                       ++++ +|+...   ...+|+.+++++...   +.+.. . .....++++.++.|+++....  .+|+.++.+|+..+.+
T Consensus       280 -~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l  357 (695)
T 2bkl_A          280 -WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV  357 (695)
T ss_dssp             -ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred             -cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence             4545 777644   357899999986652   34433 2 233467777888888875433  4677777666544433

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=98.08  E-value=0.0021  Score=50.23  Aligned_cols=196  Identities=11%  Similarity=-0.021  Sum_probs=121.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+++|++.+..|.-+. .++ .|...++........+...-.....+++.+.++.|+ +-...+.|...++........
T Consensus        16 V~~~~fsp~~~~l~s~~-~dg-~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~d~~i~vwd~~~~~~~~~   92 (304)
T 2ynn_A           16 VKGIDFHPTEPWVLTTL-YSG-RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWII-VGSDDFRIRVFNYNTGEKVVD   92 (304)
T ss_dssp             EEEEEECSSSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEE-EEETTSEEEEEETTTCCEEEE
T ss_pred             eEEEEECCCCCEEEEEc-CCC-cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEE-EECCCCEEEEEECCCCcEEEE
Confidence            35899999766666555 445 788889886554334443345677888888666665 555568899999887665555


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      +.........++++|.+..|.-+..   .+.|...++...................+++++.++.++.+-...+.|...+
T Consensus        93 ~~~h~~~v~~~~~~~~~~~l~sgs~---D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd  169 (304)
T 2ynn_A           93 FEAHPDYIRSIAVHPTKPYVLSGSD---DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS  169 (304)
T ss_dssp             EECCSSCEEEEEECSSSSEEEEEET---TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred             EeCCCCcEEEEEEcCCCCEEEEECC---CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence            5556667889999996555554443   3557777776543322222221445689999986566556666678888888


Q ss_pred             cCCCce-EEEecC-CCceEEEEEE---CCEEEEEeCCCCcEEEEeCC
Q psy5751         162 IRNRVR-RKVYSN-CTYPFGLSIT---DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       162 ~~g~~~-~~~~~~-~~~p~gla~~---~~~ly~td~~~~~i~~~~~~  203 (232)
                      +..... ..+... ......+++.   ++.+..+-...+.|...+..
T Consensus       170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~  216 (304)
T 2ynn_A          170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ  216 (304)
T ss_dssp             TTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT
T ss_pred             CCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC
Confidence            865433 222222 2223344442   33445555555667666665

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=98.07  E-value=0.0028  Score=51.18  Aligned_cols=192  Identities=7%  Similarity=-0.085  Sum_probs=121.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+++|++..+.|+.+.. ++ .|...+.++..... +......+.++++.+.++.|+.+. ..+.|...++........
T Consensus       111 v~~~~~s~~~~~l~~~~~-dg-~i~i~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~  186 (425)
T 1r5m_A          111 VTCLAWSHDGNSIVTGVE-NG-ELRLWNKTGALLNV-LNFHRAPIVSVKWNKDGTHIISMD-VENVTILWNVISGTVMQH  186 (425)
T ss_dssp             EEEEEECTTSSEEEEEET-TS-CEEEEETTSCEEEE-ECCCCSCEEEEEECTTSSEEEEEE-TTCCEEEEETTTTEEEEE
T ss_pred             eEEEEEcCCCCEEEEEeC-CC-eEEEEeCCCCeeee-ccCCCccEEEEEECCCCCEEEEEe-cCCeEEEEECCCCcEEEE
Confidence            357889986666666554 34 68888866655433 333446788999988777676554 457899999876554433


Q ss_pred             EeCCCCC---------------ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751          82 VSKDLVN---------------PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        82 ~~~~~~~---------------p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~  146 (232)
                      +......               ...++..+ ++.++....   .+.|...++........+... ......+++++.+..
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~  261 (425)
T 1r5m_A          187 FELKETGGSSINAENHSGDGSLGVDVEWVD-DDKFVIPGP---KGAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNKL  261 (425)
T ss_dssp             ECCC---------------CCCBSCCEEEE-TTEEEEECG---GGCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTTE
T ss_pred             eeccccCccceeeccccCCcceeeEEEEcC-CCEEEEEcC---CCeEEEEEcCCCceeeeeccC-CCceEEEEECCCCCE
Confidence            3322222               66778876 566555543   356888888765443333322 445688999998666


Q ss_pred             EEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         147 LCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      |+.+ ...+.|...+++.... ..+.........+++. ++ ++++-...+.|...+...
T Consensus       262 l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~  319 (425)
T 1r5m_A          262 LLSA-SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ  319 (425)
T ss_dssp             EEEE-ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT
T ss_pred             EEEE-cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC
Confidence            6555 4567888888876543 3333344455678876 45 566666678888888763

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=98.05  E-value=0.0024  Score=49.88  Aligned_cols=194  Identities=9%  Similarity=-0.018  Sum_probs=121.9

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+++|++..+.|..+. .++ .|...++........+......+..+++.+.++.|+ +-...+.|...++........
T Consensus        26 v~~~~~s~~~~~l~s~~-~dg-~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~  102 (312)
T 4ery_A           26 VSSVKFSPNGEWLASSS-ADK-LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLV-SASDDKTLKIWDVSSGKCLKT  102 (312)
T ss_dssp             EEEEEECTTSSEEEEEE-TTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEE
T ss_pred             EEEEEECCCCCEEEEee-CCC-eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEE-EECCCCEEEEEECCCCcEEEE
Confidence            35788998666665544 444 688888876555455554456788899998666555 555568899999887665555


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      +.........++++|....|+....   .+.|...++........+... ......+++++++..|+.+ ...+.|...+
T Consensus       103 ~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~d~~i~~wd  177 (312)
T 4ery_A          103 LKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDGSLIVSS-SYDGLCRIWD  177 (312)
T ss_dssp             EECCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEE-ETTSCEEEEE
T ss_pred             EcCCCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCEEEEEecCC-CCcEEEEEEcCCCCEEEEE-eCCCcEEEEE
Confidence            5555566788999986666655553   356888888765443333321 3456789999975555544 5577888888


Q ss_pred             cCCCce-EEEecC-CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         162 IRNRVR-RKVYSN-CTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       162 ~~g~~~-~~~~~~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +..... ..+... ......+++. ++..+++-...+.|...+..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~  222 (312)
T 4ery_A          178 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS  222 (312)
T ss_dssp             TTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred             CCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence            875543 333222 2233456664 33344444445666666654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.04  E-value=0.0018  Score=57.69  Aligned_cols=192  Identities=9%  Similarity=0.013  Sum_probs=117.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .++..|. ++.||++-.. + .|++++.+....+.....  ....+..+..|. .+.||++..  +.|++++.++.....
T Consensus       410 ~~i~~d~-~g~lWigt~~-~-Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~  483 (781)
T 3v9f_A          410 LCSLKDS-EGNLWFGTYL-G-NISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLASKKVIH  483 (781)
T ss_dssp             EEEEECT-TSCEEEEETT-E-EEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSSSSCCE
T ss_pred             EEEEECC-CCCEEEEecc-C-CEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCCCeEEe
Confidence            3566665 5667665433 3 588887765443332211  224667788886 567887765  579999887655444


Q ss_pred             EEeCC-----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCC--CCcceEEEeCCCCEEEEEECC
Q psy5751          81 IVSKD-----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADL--KLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        81 ~~~~~-----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~--~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      .....     ...+.+++.|+ +|.||++..+.   -+.+.+.++...+.+.....+  ....+|..|.. +.||++.. 
T Consensus       484 ~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~---Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWi~T~-  557 (781)
T 3v9f_A          484 HYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGG---GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSK-GQMWLATG-  557 (781)
T ss_dssp             EECTTTSSCSCSCEEEEEECT-TCCEEEEESSS---CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTT-SCEEEEET-
T ss_pred             cccCcccccccceeEEEEEcC-CCCEEEEEcCC---CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCC-CCEEEEEC-
Confidence            43322     24578899997 78898887532   288888776544433221112  23457777875 78888765 


Q ss_pred             CCcEEEEecCCCceEEEec--CCC--ceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751         154 SKSLECMTIRNRVRRKVYS--NCT--YPFGLSIT-DEKYYWTDWKTNRIESANKEGERAP  208 (232)
Q Consensus       154 ~~~i~~~~~~g~~~~~~~~--~~~--~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~  208 (232)
                      .+-+.+++..+...+.+..  .++  ...+++.+ +|.||++-  .+.|.++++.+...+
T Consensus       558 ~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~  615 (781)
T 3v9f_A          558 EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTGISCYITSKKCFY  615 (781)
T ss_dssp             TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSCEEEEETTTTEEE
T ss_pred             CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCceEEEECCCCceE
Confidence            4433888877665555432  232  24577776 68888875  345889988755444

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=98.04  E-value=0.0015  Score=52.52  Aligned_cols=215  Identities=9%  Similarity=0.026  Sum_probs=126.5

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce---eEE-EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV---EDV-ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~---~~~-~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      .+++|.+ ++.++.+.. ++ .|...++.....   ... .......+.++++.+.++.|. +-...+.|...++.....
T Consensus        98 ~~~~~s~-d~~~l~~s~-dg-~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-sgs~dg~v~iwd~~~~~~  173 (357)
T 4g56_B           98 TDVAWVS-EKGILVASD-SG-AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAV-SGGKDFSVKVWDLSQKAV  173 (357)
T ss_dssp             EEEEEET-TTEEEEEET-TS-CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTTEE
T ss_pred             EEEEEcC-CCCEEEEEC-CC-EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCcE
Confidence            5788888 456665543 44 677777654321   111 112235678899998666555 555567899999887665


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE-cCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK-AADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~-~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                      ...+.........+++.+.++.++.+...  .+.|...++.......... ...-..+..+++++.++.++.+-...+.|
T Consensus       174 ~~~~~~h~~~v~~v~~s~~~~~~~~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i  251 (357)
T 4g56_B          174 LKSYNAHSSEVNCVAACPGKDTIFLSCGE--DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNV  251 (357)
T ss_dssp             EEEECCCSSCEEEEEECTTCSSCEEEEET--TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCE
T ss_pred             EEEEcCCCCCEEEEEEccCCCceeeeecc--CCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccce
Confidence            55555556677889998866556655433  4567777776443222221 11133567899999877777665667788


Q ss_pred             EEEecCCCceE-EEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEE
Q psy5751         158 ECMTIRNRVRR-KVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAV  226 (232)
Q Consensus       158 ~~~~~~g~~~~-~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~  226 (232)
                      ...++...+.. .+.........+++.  ++.+..+-...+.|...+......  +.. ..+.....+|++-
T Consensus       252 ~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~--~~~-~~H~~~V~~vafs  320 (357)
T 4g56_B          252 SLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV--FRD-LSHRDFVTGVAWS  320 (357)
T ss_dssp             EEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE--EEE-CCCSSCEEEEEEC
T ss_pred             eEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE--eEE-CCCCCCEEEEEEe
Confidence            88888765443 333333445677773  345555555567788887764332  222 2334455666653

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.04  E-value=0.0028  Score=50.17  Aligned_cols=185  Identities=12%  Similarity=0.062  Sum_probs=108.5

Q ss_pred             EEEEEeCCCCEEEEEEcCC--C-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC---------------
Q psy5751           3 IGITVDCVEGQVYYSSVAD--K-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ---------------   64 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~--~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~---------------   64 (232)
                      ..+.|.+.++.|+++....  . ..|+.+++++.....+.... . +.++++.+.++.|+++...               
T Consensus        62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~  139 (347)
T 2gop_A           62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA  139 (347)
T ss_dssp             EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred             CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence            4678999888887776432  2 25999999876654554432 2 7788888778888887522               


Q ss_pred             -----------CCeEEEEeCCCCCC-EEEEeCCCCCceEEEEeCCCCeEEEEEcCCC------CCcEEEEeCCCCCcEEE
Q psy5751          65 -----------MDTISMANLNDDQP-KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS------GPKIEWSNLDGTDREIF  126 (232)
Q Consensus        65 -----------~~~I~~~~~~g~~~-~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~------~~~I~~~~~~g~~~~~~  126 (232)
                                 ...|+++++++... +.+.. .  ....++.+| +|.+|.+.....      ..+|+.++ .+ ..+.+
T Consensus       140 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~sp-dg~~~~~~~~~~~~~~~~~~~l~~~d-~~-~~~~l  213 (347)
T 2gop_A          140 WFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHR-DKIVVNVPHREIIPQYFKFWDIYIWE-DG-KEEKM  213 (347)
T ss_dssp             C---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEET-TEEEEEEECCCSSCCSSCCEEEEEEE-TT-EEEEE
T ss_pred             eecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCC-CeEEEEEecccccccccccccEEEeC-CC-ceEEe
Confidence                       35799999987665 44444 2  677889998 455554443211      34688887 33 33333


Q ss_pred             EEcCCCCCcceEEEeCCCCEEEEEECC-------CCcEEEEecCCCceEEEecCCCce-EE-EEEECCEEEEEeCC--CC
Q psy5751         127 LKAADLKLPNSLAVDFRTDELCWVDAD-------SKSLECMTIRNRVRRKVYSNCTYP-FG-LSITDEKYYWTDWK--TN  195 (232)
Q Consensus       127 ~~~~~~~~p~~l~~d~~~~~Ly~~d~~-------~~~i~~~~~~g~~~~~~~~~~~~p-~g-la~~~~~ly~td~~--~~  195 (232)
                      ...   .  ....+++++.+|+++...       ...|+.++ . +..+.+....... .. +++. +.+|++-..  ..
T Consensus       214 ~~~---~--~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~-~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~  285 (347)
T 2gop_A          214 FEK---V--SFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-G-KEVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSV  285 (347)
T ss_dssp             EEE---E--SEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-S-SCEEESSTTCCSEEEEEEEET-TEEEEEEEETTEE
T ss_pred             ccC---c--ceeeECCCCCEEEEEEccccCCccccceEEEEC-C-CceEeccccCCcccCCccEEc-CcEEEEEecCCcE
Confidence            221   1  112337777788777543       35788888 3 3444444333232 33 4554 336665332  23


Q ss_pred             cEEEEeCCCC
Q psy5751         196 RIESANKEGE  205 (232)
Q Consensus       196 ~i~~~~~~g~  205 (232)
                      +|+ ++ +|.
T Consensus       286 ~l~-~~-~g~  293 (347)
T 2gop_A          286 NLY-IW-DGE  293 (347)
T ss_dssp             EEE-EE-SSS
T ss_pred             EEE-Ec-CCc
Confidence            556 66 443

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=98.04  E-value=0.0026  Score=49.71  Aligned_cols=219  Identities=8%  Similarity=-0.020  Sum_probs=131.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-CEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-PKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~   81 (232)
                      .++.|.+..+.|+.+. .++ .|...+++.......+......+..+++.+.++.| .+-...+.|...++.... ....
T Consensus        59 ~~~~~~~~~~~l~s~s-~d~-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~  135 (304)
T 2ynn_A           59 RAGKFIARKNWIIVGS-DDF-RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALEQT  135 (304)
T ss_dssp             EEEEEEGGGTEEEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEEGGGTTEEEEE
T ss_pred             EEEEEeCCCCEEEEEC-CCC-EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEE-EEECCCCeEEEEECCCCcchhhh
Confidence            3667777666665554 445 78888887655434444445678899999866555 466667889999987653 3334


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC-CCEEEEEECCCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR-TDELCWVDADSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~-~~~Ly~~d~~~~~i~~~  160 (232)
                      +.........++++|.++.++.+-..  .+.|...++........+........+.+.+.+. ++.+..+-...+.|...
T Consensus       136 ~~~h~~~v~~v~~~p~~~~~l~sgs~--D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW  213 (304)
T 2ynn_A          136 FEGHEHFVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW  213 (304)
T ss_dssp             ECCCCSCEEEEEECTTCTTEEEEEET--TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred             hcccCCcEEEEEECCCCCCEEEEEeC--CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence            44455567899999865555555433  4568888876544333332221234456677653 34444555667888888


Q ss_pred             ecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +++......... .......+++. .+.+..+-...+.|...+... ...+.+.   .+......+++.+++
T Consensus       214 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~---~~~~~~~~~~~~~~~  282 (304)
T 2ynn_A          214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---VGLERSWCIATHPTG  282 (304)
T ss_dssp             ETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC---CSSSSEEEEEECTTC
T ss_pred             eCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc---CCCccEEEEEECCCC
Confidence            888654433333 33444566664 445556666667788888764 3333332   334455666665543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=97.99  E-value=0.0071  Score=53.19  Aligned_cols=196  Identities=8%  Similarity=0.025  Sum_probs=119.9

Q ss_pred             CCCEEEEEEcCC-C--CcEEEEEcCCCceeEEEeCC-C-----CCccEEEEeecCCeEEEEeCCCC----eEEEEeCCCC
Q psy5751          10 VEGQVYYSSVAD-K--SSIKRAHLDGKNVEDVITTN-I-----RSPEGLTFDWVNRVLYWTDSQMD----TISMANLNDD   76 (232)
Q Consensus        10 ~~~~ly~~d~~~-~--~~i~~~~~~g~~~~~~~~~~-~-----~~p~gl~~d~~~~~ly~~d~~~~----~I~~~~~~g~   76 (232)
                      ..+++|+.-... +  +.|++.+..+...+.++... +     ....++++.+.++.|.++....+    .|++.++++.
T Consensus        82 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg  161 (710)
T 2xdw_A           82 KGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA  161 (710)
T ss_dssp             ETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT
T ss_pred             ECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC
Confidence            456776664322 2  36888887765544444321 1     13467888888888877654332    7999999887


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-------------CCcEEEEeCCCCCc--EEEEEcC-CCCCcceEEE
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-------------GPKIEWSNLDGTDR--EIFLKAA-DLKLPNSLAV  140 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-------------~~~I~~~~~~g~~~--~~~~~~~-~~~~p~~l~~  140 (232)
                      .......... ...+++..|.++.||++.....             ..+|++.++.+...  ..+.... .-....++++
T Consensus       162 ~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~  240 (710)
T 2xdw_A          162 KELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL  240 (710)
T ss_dssp             EEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred             CCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence            6443222111 2457899987888988865432             34699999876543  2333322 0123458999


Q ss_pred             eCCCCEEEEEEC-C---CCcEEEEecCC------C--ceEEEecCCC-ceEEEEEECCEEEEEeCC---CCcEEEEeCCC
Q psy5751         141 DFRTDELCWVDA-D---SKSLECMTIRN------R--VRRKVYSNCT-YPFGLSITDEKYYWTDWK---TNRIESANKEG  204 (232)
Q Consensus       141 d~~~~~Ly~~d~-~---~~~i~~~~~~g------~--~~~~~~~~~~-~p~gla~~~~~ly~td~~---~~~i~~~~~~g  204 (232)
                      ++++++|+++.. .   ...|+.+++++      +  ..+.+..... ....+.-+++.||++...   +.+|..++..+
T Consensus       241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~  320 (710)
T 2xdw_A          241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTD  320 (710)
T ss_dssp             CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred             cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            999888888753 2   46899999875      3  3444433222 222234467888887543   34799998875


Q ss_pred             CC
Q psy5751         205 ER  206 (232)
Q Consensus       205 ~~  206 (232)
                      ..
T Consensus       321 ~~  322 (710)
T 2xdw_A          321 PE  322 (710)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=97.99  E-value=0.002  Score=59.26  Aligned_cols=142  Identities=11%  Similarity=0.029  Sum_probs=97.2

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEE-EEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIK-RAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~-~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      +++|. ..+.|+++.. .. .|+ .+++++.....+. .....+..+++.+.++.|+++... +.|++.++.+.....+.
T Consensus       342 ~~~~s-dg~~l~~~s~-~~-~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~-~~v~~~d~~tg~~~~~~  416 (1045)
T 1k32_A          342 RRGGD-TKVAFIHGTR-EG-DFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR-FEIMTVDLETGKPTVIE  416 (1045)
T ss_dssp             EECSS-SEEEEEEEET-TE-EEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEE
T ss_pred             eeeEc-CCCeEEEEEC-CC-ceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC-CeEEEEECCCCceEEec
Confidence            34555 4456666554 44 788 8888876654443 334567889999988888877654 68999999887766666


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCC-------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNR-------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~-------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      ........+++++|..+.|.++....       ....|+..++++.....+ ... ...+..+++++++.+||++..
T Consensus       417 ~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l-~~~-~~~~~~~~~spdG~~l~~~s~  491 (1045)
T 1k32_A          417 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TTE-NSHDYAPAFDADSKNLYYLSY  491 (1045)
T ss_dssp             ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC-SCS-SSBEEEEEECTTSCEEEEEES
T ss_pred             cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe-eCC-CcccCCceEcCCCCEEEEEec
Confidence            54444557899999777787775421       235788999887643222 221 445678899999899998865

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=97.98  E-value=0.0015  Score=51.68  Aligned_cols=163  Identities=12%  Similarity=0.048  Sum_probs=101.8

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC----CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCC
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ----MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYR   99 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~----~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~   99 (232)
                      .|+.+++++.....+     .....+++.+.++.|+++...    ...|+++++++.....+.....  ..+++..|.++
T Consensus        44 ~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~  116 (347)
T 2gop_A           44 TIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSR  116 (347)
T ss_dssp             EEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSS
T ss_pred             eEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCC
Confidence            688899987665444     456778898888888877543    3459999998876555554222  77889998777


Q ss_pred             eEEEEEcC------------------------CCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECC-
Q psy5751         100 KLFWSDWN------------------------RSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDAD-  153 (232)
Q Consensus       100 ~ly~~d~~------------------------~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~-  153 (232)
                      .|+++...                        ....+|++.++++... ..+.. .   ....+++++++ .+|.+... 
T Consensus       117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~  191 (347)
T 2gop_A          117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHRE  191 (347)
T ss_dssp             EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEEEEECCC
T ss_pred             EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEEEEeccc
Confidence            88887532                        0135688899887665 44433 2   56788999985 55555332 


Q ss_pred             -------CCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCC-------CCcEEEEe
Q psy5751         154 -------SKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWK-------TNRIESAN  201 (232)
Q Consensus       154 -------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~-------~~~i~~~~  201 (232)
                             ...|+.++  ++..+.+... .....+.-++.+|+++...       ...|+.++
T Consensus       192 ~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d  250 (347)
T 2gop_A          192 IIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD  250 (347)
T ss_dssp             SSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred             ccccccccccEEEeC--CCceEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence                   33688888  3444444333 2222332245556555422       24677777

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=97.98  E-value=0.00012  Score=62.19  Aligned_cols=108  Identities=19%  Similarity=0.214  Sum_probs=79.7

Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCC-------------------CCCcEEEEeCCCCC-------cEEEEEc--------
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNR-------------------SGPKIEWSNLDGTD-------REIFLKA--------  129 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~-------------------~~~~I~~~~~~g~~-------~~~~~~~--------  129 (232)
                      +.+.+|.+++++|.++.+|++-.+.                   ..++|+++..++..       -.+++..        
T Consensus       381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~  460 (592)
T 4a9v_A          381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG  460 (592)
T ss_dssp             CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred             ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence            4677999999999999999985431                   13789998875432       1333321        


Q ss_pred             ------------CCCCCcceEEEeCCCCEEEE-EECC-----------CCcEEEEecCCCceEEEec--CCCceEEEEEE
Q psy5751         130 ------------ADLKLPNSLAVDFRTDELCW-VDAD-----------SKSLECMTIRNRVRRKVYS--NCTYPFGLSIT  183 (232)
Q Consensus       130 ------------~~~~~p~~l~~d~~~~~Ly~-~d~~-----------~~~i~~~~~~g~~~~~~~~--~~~~p~gla~~  183 (232)
                                  ..+..|++|+||+. +.||+ +|..           .+.+++++++.+..+.++.  ....|.|+++.
T Consensus       461 ~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS  539 (592)
T 4a9v_A          461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS  539 (592)
T ss_dssp             SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred             ccccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence                        12688999999997 89999 7753           3479999997667766765  45679999994


Q ss_pred             --CCEEEEEeC
Q psy5751         184 --DEKYYWTDW  192 (232)
Q Consensus       184 --~~~ly~td~  192 (232)
                        +..||++-.
T Consensus       540 PD~ktLfV~vQ  550 (592)
T 4a9v_A          540 PDQKTLFVGIQ  550 (592)
T ss_dssp             TTSSEEEEEEE
T ss_pred             CCCCEEEEEEe
Confidence              678999854

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=97.98  E-value=0.0034  Score=48.97  Aligned_cols=195  Identities=9%  Similarity=-0.023  Sum_probs=119.9

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++..+.|+.+. .++ .|...+++.......+.........+++.+.++.|+ +-...+.|...++........+
T Consensus        69 ~~~~~~~~~~~l~s~~-~d~-~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~  145 (312)
T 4ery_A           69 SDVAWSSDSNLLVSAS-DDK-TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDESVRIWDVKTGKCLKTL  145 (312)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTCCEEEEE
T ss_pred             EEEEEcCCCCEEEEEC-CCC-EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCEEEEEe
Confidence            4788988666665554 445 788889886554444444446678889988666555 5555678999998876654445


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      .........+++++....|+.+..   .+.|...++........+..........+++++.+..|..+ ...+.|...++
T Consensus       146 ~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~iwd~  221 (312)
T 4ery_A          146 PAHSDPVSAVHFNRDGSLIVSSSY---DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDY  221 (312)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE-ETTTEEEEEET
T ss_pred             cCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE-cCCCeEEEEEC
Confidence            444456688999985555555543   35688888875543333322213345678999986666554 55678888888


Q ss_pred             CCCceEEEecC-CC--ceEEEEE--ECCEEEEEeCCCCcEEEEeCCC
Q psy5751         163 RNRVRRKVYSN-CT--YPFGLSI--TDEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       163 ~g~~~~~~~~~-~~--~p~gla~--~~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ........... ..  ......+  .++.++++-...+.|...+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~  268 (312)
T 4ery_A          222 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT  268 (312)
T ss_dssp             TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred             CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence            76544333221 11  1111122  3455566666667777777653

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=97.97  E-value=0.0045  Score=50.23  Aligned_cols=192  Identities=9%  Similarity=0.028  Sum_probs=116.7

Q ss_pred             EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCC
Q psy5751           6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKD   85 (232)
Q Consensus         6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~   85 (232)
                      .+.+..+.|. +-..++ .|...++........+......+..+++.+.++.|+ +-...+.|...++........+...
T Consensus       104 ~~~~~~~~l~-~~~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~h  180 (420)
T 3vl1_A          104 TAKLQMRRFI-LGTTEG-DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI-SSSQDMQLKIWSVKDGSNPRTLIGH  180 (420)
T ss_dssp             EECSSSCEEE-EEETTS-CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCCCEEEECC
T ss_pred             EEecCCCEEE-EEECCC-CEEEEeCCCcceeeecccccCccEEEEECCCCCEEE-EEeCCCeEEEEeCCCCcCceEEcCC
Confidence            3444444444 444445 788888886654444334456788999998666555 5555688999998766554444556


Q ss_pred             CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--CC---------------------CCcceEEEeC
Q psy5751          86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--DL---------------------KLPNSLAVDF  142 (232)
Q Consensus        86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--~~---------------------~~p~~l~~d~  142 (232)
                      ......++++|....|+.+..   .+.|...++........+...  ..                     .....+++++
T Consensus       181 ~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~  257 (420)
T 3vl1_A          181 RATVTDIAIIDRGRNVLSASL---DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT  257 (420)
T ss_dssp             SSCEEEEEEETTTTEEEEEET---TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred             CCcEEEEEEcCCCCEEEEEcC---CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence            667889999996666665553   345777777654333222210  01                     2233455566


Q ss_pred             CCCEEEEEECCCCcEEEEecCCCceEE-Eec-CCCceEEEEEE-CCE-EEEEeCCCCcEEEEeCCC
Q psy5751         143 RTDELCWVDADSKSLECMTIRNRVRRK-VYS-NCTYPFGLSIT-DEK-YYWTDWKTNRIESANKEG  204 (232)
Q Consensus       143 ~~~~Ly~~d~~~~~i~~~~~~g~~~~~-~~~-~~~~p~gla~~-~~~-ly~td~~~~~i~~~~~~g  204 (232)
                      ++..| ++-...+.|...++....... +.. .......+++. ++. ++++-...+.|...+...
T Consensus       258 ~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~  322 (420)
T 3vl1_A          258 YGKYV-IAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS  322 (420)
T ss_dssp             TTEEE-EEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred             CCCEE-EEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence            64444 454567788888887655432 322 23445678875 333 555555668888888874

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=97.96  E-value=0.0015  Score=51.67  Aligned_cols=158  Identities=9%  Similarity=0.025  Sum_probs=99.4

Q ss_pred             EEEEEeCC---CCEEEEEEcCCCCcEEEEEcCCCc-eeEEEeC----CCCCccEEEEeecC---CeEEEEeCCCCeEEEE
Q psy5751           3 IGITVDCV---EGQVYYSSVADKSSIKRAHLDGKN-VEDVITT----NIRSPEGLTFDWVN---RVLYWTDSQMDTISMA   71 (232)
Q Consensus         3 ~~i~~d~~---~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~----~~~~p~gl~~d~~~---~~ly~~d~~~~~I~~~   71 (232)
                      .+++|++.   .+.++++-...+ .|...++.... ...+...    ....+..+++.+..   +.++++-...+.|...
T Consensus        22 ~~i~~~p~~~~~~~~~~~~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~  100 (366)
T 3k26_A           22 FGVQFNWHSKEGDPLVFATVGSN-RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII  100 (366)
T ss_dssp             EEEEECTTCCTTSCEEEEEEETT-EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEE
T ss_pred             EEEEEecccCCCCceEEEECCCC-EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEE
Confidence            47888873   344444444455 68888887433 2222211    22467888888753   3455566667899999


Q ss_pred             eCCCCCCEEEEeCCCCCceEEEEeC-CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE--cCCCCCcceEEEeCCCCEEE
Q psy5751          72 NLNDDQPKVIVSKDLVNPRGIVVHP-YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK--AADLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        72 ~~~g~~~~~~~~~~~~~p~~iavd~-~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~--~~~~~~p~~l~~d~~~~~Ly  148 (232)
                      ++........+.........++++| ....|+....   .+.|...++........+.  ...-.....+++++++..|+
T Consensus       101 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  177 (366)
T 3k26_A          101 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK---DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM  177 (366)
T ss_dssp             CTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET---TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred             EchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC---CCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence            9887665555555666788999998 4444544443   4568888887654443331  12245678999999866665


Q ss_pred             EEECCCCcEEEEecCCC
Q psy5751         149 WVDADSKSLECMTIRNR  165 (232)
Q Consensus       149 ~~d~~~~~i~~~~~~g~  165 (232)
                      .+ ...+.|...+++..
T Consensus       178 ~~-~~dg~i~i~d~~~~  193 (366)
T 3k26_A          178 SC-GMDHSLKLWRINSK  193 (366)
T ss_dssp             EE-ETTSCEEEEESCSH
T ss_pred             Ee-cCCCCEEEEECCCC
Confidence            55 45677888887743

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=97.93  E-value=0.0047  Score=49.08  Aligned_cols=197  Identities=10%  Similarity=0.056  Sum_probs=118.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeec--CCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      ..+++|++..+.|..+.. ++ .|...++++...+  ..+......+..+++.+.  ++.|+ +-...+.|...++....
T Consensus        14 v~~~~~s~~~~~l~~~~~-dg-~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~   90 (379)
T 3jrp_A           14 IHDAVLDYYGKRLATCSS-DK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILA-SCSYDGKVLIWKEENGR   90 (379)
T ss_dssp             EEEEEECSSSSEEEEEET-TS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSCEEEEEEETTE
T ss_pred             EEEEEEcCCCCEEEEEEC-CC-cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEE-EeccCCEEEEEEcCCCc
Confidence            357899987676665543 44 6888887643322  223333456778888654  45554 55556789998887764


Q ss_pred             --CEEEEeCCCCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCC--------
Q psy5751          78 --PKVIVSKDLVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFR--------  143 (232)
Q Consensus        78 --~~~~~~~~~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~--------  143 (232)
                        ..............++++|.  ...|+.+..   .+.|...++....  ........ ......+++++.        
T Consensus        91 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~  166 (379)
T 3jrp_A           91 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEH  166 (379)
T ss_dssp             EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCTTSCCCEEEEECC-TTCEEEEEECCCC-------
T ss_pred             eeEeeeecCCCcceEEEEeCCCCCCCEEEEecC---CCcEEEEecCCCCceeeEEecCC-CCceEEEEEcCccccccccc
Confidence              22333345567789999986  455555553   4568888876652  22233322 456688999984        


Q ss_pred             ----CCEEEEEECCCCcEEEEecCCCceE-EE-e---cCCCceEEEEEE-C---CEEEEEeCCCCcEEEEeCCCC
Q psy5751         144 ----TDELCWVDADSKSLECMTIRNRVRR-KV-Y---SNCTYPFGLSIT-D---EKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       144 ----~~~Ly~~d~~~~~i~~~~~~g~~~~-~~-~---~~~~~p~gla~~-~---~~ly~td~~~~~i~~~~~~g~  205 (232)
                          ++.++++-...+.|...+++..... .+ .   ........+++. .   +.++.+-...+.|...+....
T Consensus       167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~  241 (379)
T 3jrp_A          167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE  241 (379)
T ss_dssp             ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred             cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence                2444455455677777777644321 12 1   123445678874 3   566666666777887777643

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=97.93  E-value=0.0054  Score=49.76  Aligned_cols=196  Identities=11%  Similarity=0.007  Sum_probs=120.9

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+++|++..+.|+.+. .++ .|...++........+......+.++++.+.++.|+ +-...+.|...++........
T Consensus       142 v~~~~~~~~~~~l~s~s-~d~-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~~  218 (420)
T 3vl1_A          142 ITKLKFFPSGEALISSS-QDM-QLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL-SASLDGTIRLWECGTGTTIHT  218 (420)
T ss_dssp             EEEEEECTTSSEEEEEE-TTS-EEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEEE
T ss_pred             cEEEEECCCCCEEEEEe-CCC-eEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE-EEcCCCcEEEeECCCCceeEE
Confidence            35789998666565444 445 799999885544344444456788999998666666 444557899999876544333


Q ss_pred             EeC---CC---------------------CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcce
Q psy5751          82 VSK---DL---------------------VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNS  137 (232)
Q Consensus        82 ~~~---~~---------------------~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~  137 (232)
                      +..   ..                     .....++++|....|+....   .+.|...++........+..........
T Consensus       219 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~v~~  295 (420)
T 3vl1_A          219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV---SGVITVHNVFSKEQTIQLPSKFTCSCNS  295 (420)
T ss_dssp             ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET---TSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred             eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC---CCeEEEEECCCCceeEEcccccCCCcee
Confidence            321   11                     22233445563344444442   4568888887665444443322346789


Q ss_pred             EEEeCCCCEEEEEECCCCcEEEEecCCCc--eEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         138 LAVDFRTDELCWVDADSKSLECMTIRNRV--RRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       138 l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~--~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++++.+..++++-...+.|...+++...  ...+.. .......+.+..+.++++-...+.|...+..
T Consensus       296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~  364 (420)
T 3vl1_A          296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIIS  364 (420)
T ss_dssp             EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred             EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEecc
Confidence            99999866355555667889999998653  234433 3333445656677777777777777777654

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=97.93  E-value=0.0045  Score=48.82  Aligned_cols=197  Identities=8%  Similarity=-0.043  Sum_probs=116.9

Q ss_pred             eEEEEEeCCCCEEEEEEcC---CCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecC--CeEEEEeCCCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVA---DKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVN--RVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~---~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~--~~ly~~d~~~~~I~~~~~~g   75 (232)
                      ..+++|++.+..+..+...   ++ .|...+++......+.. .....+..+++.+..  +.++++-...+.|...++..
T Consensus        21 v~~~~~~p~~~~l~~~~s~~~~d~-~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~   99 (357)
T 3i2n_A           21 VFDCKWVPCSAKFVTMGNFARGTG-VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA   99 (357)
T ss_dssp             EEEEEECTTSSEEEEEEC--CCCE-EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS
T ss_pred             eEEEEEcCCCceEEEecCccCCCc-EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC
Confidence            3578999977777766543   55 88888888655433322 233577888888753  34444555668899999887


Q ss_pred             CC-CEEEEeCCCCCceEEE------EeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCC--CCCcceEE----E
Q psy5751          76 DQ-PKVIVSKDLVNPRGIV------VHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAAD--LKLPNSLA----V  140 (232)
Q Consensus        76 ~~-~~~~~~~~~~~p~~ia------vd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~--~~~p~~l~----~  140 (232)
                      .. ....+.........++      +++....|+.+..   .+.|...++....  ...+.....  ......++    +
T Consensus       100 ~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  176 (357)
T 3i2n_A          100 PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY  176 (357)
T ss_dssp             CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET---TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred             CCccEEEEEecccceEEEeeccccccCCCccEEEEEeC---CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence            65 4444444555566664      3554455555443   3568888877654  222221110  11344555    4


Q ss_pred             eCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE----CCEEEEEeCCCCcEEEEeCC
Q psy5751         141 DFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT----DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       141 d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~----~~~ly~td~~~~~i~~~~~~  203 (232)
                      ++.+..| ++-...+.|...+++................+++.    .+..+++-...+.|...+..
T Consensus       177 ~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  242 (357)
T 3i2n_A          177 NQEERVV-CAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR  242 (357)
T ss_dssp             C-CCCEE-EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred             CCCCCEE-EEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence            4554444 44455778999999877654444444556778874    44555555556778777765

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=97.90  E-value=0.0051  Score=48.61  Aligned_cols=196  Identities=8%  Similarity=-0.043  Sum_probs=116.5

Q ss_pred             EEEEEeCCC---CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVE---GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~---~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .+++|.+..   +.++++-..++ .|...++........+......+..+++.+..+.++++-...+.|...++......
T Consensus        73 ~~~~~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  151 (366)
T 3k26_A           73 YTCAWTYDSNTSHPLLAVAGSRG-IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV  151 (366)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTC-EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE
T ss_pred             EEEEeccCCCCCCCEEEEecCCC-EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE
Confidence            467777642   45555555566 79999988655444444445678899998834444556556688999999866554


Q ss_pred             EEE---eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE---------------------------EEc
Q psy5751          80 VIV---SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF---------------------------LKA  129 (232)
Q Consensus        80 ~~~---~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~---------------------------~~~  129 (232)
                      ..+   ......+..++++|....|+.+..   .+.|...++........                           ...
T Consensus       152 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (366)
T 3k26_A          152 AIFGGVEGHRDEVLSADYDLLGEKIMSCGM---DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD  228 (366)
T ss_dssp             EEECSTTSCSSCEEEEEECTTSSEEEEEET---TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred             EEecccccccCceeEEEECCCCCEEEEecC---CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence            444   235567789999986666655553   34688777764321100                           000


Q ss_pred             CCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce------------EEEe---cCCCceEEEEEE-C--CEEEEEe
Q psy5751         130 ADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR------------RKVY---SNCTYPFGLSIT-D--EKYYWTD  191 (232)
Q Consensus       130 ~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~------------~~~~---~~~~~p~gla~~-~--~~ly~td  191 (232)
                      ........++++  ++ ++++-...+.|...++.....            ..+.   ........+++. +  +.+.++-
T Consensus       229 ~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~  305 (366)
T 3k26_A          229 IHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG  305 (366)
T ss_dssp             SCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE
T ss_pred             CCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE
Confidence            013445678887  34 445556677888887765432            1121   122223344542 3  5555555


Q ss_pred             CCCCcEEEEeCCCC
Q psy5751         192 WKTNRIESANKEGE  205 (232)
Q Consensus       192 ~~~~~i~~~~~~g~  205 (232)
                      ...+.|...+....
T Consensus       306 ~~dg~i~vwd~~~~  319 (366)
T 3k26_A          306 NQVGKLYVWDLEVE  319 (366)
T ss_dssp             CTTSCEEEEECCSS
T ss_pred             ecCCcEEEEECCCC
Confidence            66788888888743

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=97.89  E-value=0.0059  Score=49.03  Aligned_cols=182  Identities=9%  Similarity=-0.036  Sum_probs=116.1

Q ss_pred             CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD  119 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~  119 (232)
                      ....+..+++.+.+..++++-...+.|...++.+........  .......++++.|.++.++++-..  .+.|...++.
T Consensus        72 h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~--d~~i~iwd~~  149 (383)
T 3ei3_B           72 FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI--RGATTLRDFS  149 (383)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET--TTEEEEEETT
T ss_pred             CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC--CCEEEEEECC
Confidence            346788899998663455566667899999998877666654  355567899999844444444332  4568888888


Q ss_pred             CCCcEEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCE-EEEEeCCCCc
Q psy5751         120 GTDREIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEK-YYWTDWKTNR  196 (232)
Q Consensus       120 g~~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~-ly~td~~~~~  196 (232)
                      +.....+.... .......+++++++..|+.+ ...+.|...++++.....+........++++. ++. ++++-...+.
T Consensus       150 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~  228 (383)
T 3ei3_B          150 GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATG-DSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDAT  228 (383)
T ss_dssp             SCEEEEEECCCCSSCCEEEEEEETTTTEEEEE-ETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred             CCceEEEeccCCCCCCeEEEEECCCCCEEEEE-CCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence            75444443321 11446899999986666555 45678999999876656555555667788885 333 6666666778


Q ss_pred             EEEEeCCC-CC-cceEEeccCCcceeEEEEEEc
Q psy5751         197 IESANKEG-ER-APSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       197 i~~~~~~g-~~-~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      |...+... .. ...+.. .........+++-+
T Consensus       229 i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~s~  260 (383)
T 3ei3_B          229 VKLWDLRNIKDKNSYIAE-MPHEKPVNAAYFNP  260 (383)
T ss_dssp             EEEEEGGGCCSTTCEEEE-EECSSCEEEEEECT
T ss_pred             EEEEeCCCCCcccceEEE-ecCCCceEEEEEcC
Confidence            88888763 21 122222 12344556666544

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=97.84  E-value=0.002  Score=56.51  Aligned_cols=203  Identities=10%  Similarity=0.028  Sum_probs=118.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCC-------CcEEEEEcCCCceeEEEeCC--CCCccEEEEeecCCeEEEEeCCCCeEEEEe
Q psy5751           2 LIGITVDCVEGQVYYSSVADK-------SSIKRAHLDGKNVEDVITTN--IRSPEGLTFDWVNRVLYWTDSQMDTISMAN   72 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~-------~~i~~~~~~g~~~~~~~~~~--~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~   72 (232)
                      +.+++|++..+.|.++.....       ..|+..++++.....+....  ...+..+++.+.++.|.++..  +.|++.+
T Consensus        63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~  140 (723)
T 1xfd_A           63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCA  140 (723)
T ss_dssp             CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEES
T ss_pred             cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEEE
Confidence            347889998888877753211       27888999876543332211  112677889888888888765  5899999


Q ss_pred             CCCCCCEEEEeCCCC------------------CceEEEEeCCCCeEEEEEcCCC-------------------------
Q psy5751          73 LNDDQPKVIVSKDLV------------------NPRGIVVHPYYRKLFWSDWNRS-------------------------  109 (232)
Q Consensus        73 ~~g~~~~~~~~~~~~------------------~p~~iavd~~~~~ly~~d~~~~-------------------------  109 (232)
                      +++.....+......                  ...+++.+|.++.|.++.....                         
T Consensus       141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (723)
T 1xfd_A          141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK  220 (723)
T ss_dssp             SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred             CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence            988776665542221                  3368999997777877653211                         


Q ss_pred             ------CCcEEEEeCCCCCcEEEEEcC-C----CCCcceEEEeCCCCEEEEE-ECC--CCcEEEEecCCCceEEEecC--
Q psy5751         110 ------GPKIEWSNLDGTDREIFLKAA-D----LKLPNSLAVDFRTDELCWV-DAD--SKSLECMTIRNRVRRKVYSN--  173 (232)
Q Consensus       110 ------~~~I~~~~~~g~~~~~~~~~~-~----~~~p~~l~~d~~~~~Ly~~-d~~--~~~i~~~~~~g~~~~~~~~~--  173 (232)
                            ...|+..++++......+... .    ......+++++++..|+.. +..  ...|+.++++++....+...  
T Consensus       221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~  300 (723)
T 1xfd_A          221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES  300 (723)
T ss_dssp             TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC
T ss_pred             CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc
Confidence                  115666666655431111110 0    1123468999986666443 332  24688889887765544321  


Q ss_pred             CCc----eEEEEEE--CCEEEEE-eCCCC------cEEEEe-CCCCC
Q psy5751         174 CTY----PFGLSIT--DEKYYWT-DWKTN------RIESAN-KEGER  206 (232)
Q Consensus       174 ~~~----p~gla~~--~~~ly~t-d~~~~------~i~~~~-~~g~~  206 (232)
                      ...    +..+++.  +..|+++ ....+      .|+.++ ..++.
T Consensus       301 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~  347 (723)
T 1xfd_A          301 EAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS  347 (723)
T ss_dssp             SSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred             CCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence            111    1355663  4456654 33333      677777 44443

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=97.83  E-value=0.0077  Score=48.38  Aligned_cols=191  Identities=6%  Similarity=-0.082  Sum_probs=115.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc------eeEEEeCCCCCccEEEEeec----C---CeEEEEeCCCCeEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN------VEDVITTNIRSPEGLTFDWV----N---RVLYWTDSQMDTIS   69 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~------~~~~~~~~~~~p~gl~~d~~----~---~~ly~~d~~~~~I~   69 (232)
                      .+++|++  +.|+.+ ..++ .|...+++...      ....+......+..+++.+.    +   +.|+ +-...+.|.
T Consensus        20 ~~~~~~~--~~l~s~-~~dg-~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~-s~~~dg~i~   94 (397)
T 1sq9_A           20 FSVSACN--SFTVSC-SGDG-YLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA-TTSFSGDLL   94 (397)
T ss_dssp             EEEEECS--SEEEEE-ETTS-EEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE-EEETTSCEE
T ss_pred             EEEEecC--CeEEEE-cCCC-EEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE-EEcCCCCEE
Confidence            4788876  544444 4455 78888988655      22333344457788999886    4   4554 444567888


Q ss_pred             EEeCCCCCC-----EEEEeCC-----CCCceEEEEe----CCCCe-EEEEEcCCCCCcEEEEeCCC-------CCcE---
Q psy5751          70 MANLNDDQP-----KVIVSKD-----LVNPRGIVVH----PYYRK-LFWSDWNRSGPKIEWSNLDG-------TDRE---  124 (232)
Q Consensus        70 ~~~~~g~~~-----~~~~~~~-----~~~p~~iavd----~~~~~-ly~~d~~~~~~~I~~~~~~g-------~~~~---  124 (232)
                      ..++.....     ...+...     ......+++.    |.... |+.+...   +.|...++..       ....   
T Consensus        95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~  171 (397)
T 1sq9_A           95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADESNSLTLNWSP  171 (397)
T ss_dssp             EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHHHHTTTCCCC
T ss_pred             EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCccccccccceeeccC
Confidence            888877664     3333323     2677899999    86666 5555533   4566666654       2222   


Q ss_pred             --EEEE-----cCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecC-------CCceEEEEEE-CCEEEE
Q psy5751         125 --IFLK-----AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN-------CTYPFGLSIT-DEKYYW  189 (232)
Q Consensus       125 --~~~~-----~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~-------~~~p~gla~~-~~~ly~  189 (232)
                        .+..     .........+++++.+  ++++-...+.|...+++..........       ......+++. ++.+++
T Consensus       172 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~  249 (397)
T 1sq9_A          172 TLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLA  249 (397)
T ss_dssp             EEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEE
T ss_pred             cceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEE
Confidence              3322     1124567899999985  555656778899999886544333333       4455677774 344444


Q ss_pred             EeCCC---CcEEEEeCC
Q psy5751         190 TDWKT---NRIESANKE  203 (232)
Q Consensus       190 td~~~---~~i~~~~~~  203 (232)
                      +-...   +.|...+..
T Consensus       250 ~~~~d~~~g~i~i~d~~  266 (397)
T 1sq9_A          250 IAHDSNSFGCITLYETE  266 (397)
T ss_dssp             EEEEETTEEEEEEEETT
T ss_pred             EEecCCCCceEEEEECC
Confidence            44444   678888865

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=97.81  E-value=0.0087  Score=48.53  Aligned_cols=215  Identities=10%  Similarity=0.031  Sum_probs=124.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++.+..|+.+. .++ .|...++........+......+..+++.+.++.|+ +-...+.|...++........+
T Consensus       127 ~~v~~s~dg~~l~s~~-~d~-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~  203 (393)
T 1erj_A          127 RSVCFSPDGKFLATGA-EDR-LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQCSLTL  203 (393)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEE
T ss_pred             EEEEECCCCCEEEEEc-CCC-eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCeeEEEE
Confidence            4788988666665544 445 799999987655444544456788899988666665 5556688999998776554444


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE------cCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK------AADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~------~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      . .......+++.|.++.++.+...  .+.|...++........+.      ........++++++++..|+ +-...+.
T Consensus       204 ~-~~~~v~~~~~~~~~~~~l~~~s~--d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~d~~  279 (393)
T 1erj_A          204 S-IEDGVTTVAVSPGDGKYIAAGSL--DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV-SGSLDRS  279 (393)
T ss_dssp             E-CSSCEEEEEECSTTCCEEEEEET--TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE-EEETTSE
T ss_pred             E-cCCCcEEEEEECCCCCEEEEEcC--CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE-EEeCCCE
Confidence            4 33457788898855655555433  3557777776554322221      11123567899999866665 4455677


Q ss_pred             EEEEecCCCce-------------EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeE
Q psy5751         157 LECMTIRNRVR-------------RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMY  221 (232)
Q Consensus       157 i~~~~~~g~~~-------------~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~  221 (232)
                      |...+++....             ..+.........+++. ++....+-...+.|...+... .....+.   .+.....
T Consensus       280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~---~h~~~v~  356 (393)
T 1erj_A          280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVI  356 (393)
T ss_dssp             EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEE
T ss_pred             EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC---CCCCCEE
Confidence            77777653211             1111222334566664 444445555567777777653 3322222   2333445


Q ss_pred             EEEEEc
Q psy5751         222 GIAAVP  227 (232)
Q Consensus       222 gi~~~~  227 (232)
                      .+++.+
T Consensus       357 ~v~~~~  362 (393)
T 1erj_A          357 SVAVAN  362 (393)
T ss_dssp             EEEECS
T ss_pred             EEEecC
Confidence            555543

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=97.80  E-value=0.0084  Score=48.10  Aligned_cols=195  Identities=14%  Similarity=0.061  Sum_probs=117.9

Q ss_pred             eEEEEEeC-CCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-------------CCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751           2 LIGITVDC-VEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-------------TNIRSPEGLTFDWVNRVLYWTDSQMDT   67 (232)
Q Consensus         2 ~~~i~~d~-~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-------------~~~~~p~gl~~d~~~~~ly~~d~~~~~   67 (232)
                      ..+++|++ ..+.|+.+. .++ .|...+++.........             .....+..+++.+.++.++++-...+.
T Consensus        46 v~~~~~s~~~~~~l~~~~-~dg-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~  123 (408)
T 4a11_B           46 INTLDIEPVEGRYMLSGG-SDG-VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT  123 (408)
T ss_dssp             EEEEEECTTTCCEEEEEE-TTS-CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred             EEEEEEecCCCCEEEEEc-CCC-eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence            35788998 555555444 445 68888888643221111             133567888888745555556666789


Q ss_pred             EEEEeCCCCCCEEEEeCCCCCceEEEEeCCCC---eEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751          68 ISMANLNDDQPKVIVSKDLVNPRGIVVHPYYR---KLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT  144 (232)
Q Consensus        68 I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~---~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~  144 (232)
                      |...+++......... .......+++.+...   .++....   .+.|...++........+... .....++++++.+
T Consensus       124 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~  198 (408)
T 4a11_B          124 LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLCDLKSGSCSHILQGH-RQEILAVSWSPRY  198 (408)
T ss_dssp             EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES---SSSEEEEESSSSCCCEEECCC-CSCEEEEEECSSC
T ss_pred             EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcC---CCeEEEEeCCCcceeeeecCC-CCcEEEEEECCCC
Confidence            9999998766555554 334566777776432   4444443   456888888755443333322 4567899999987


Q ss_pred             CEEEEEECCCCcEEEEecCCCce-EEEe----------------cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         145 DELCWVDADSKSLECMTIRNRVR-RKVY----------------SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~-~~~~----------------~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..++++-...+.|...+++.... ....                .......++++. ++..+++-...+.|...+..
T Consensus       199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~  275 (408)
T 4a11_B          199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS  275 (408)
T ss_dssp             TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence            76666666678888888864431 1111                112234567774 44444444445667777765

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.80  E-value=0.0092  Score=53.11  Aligned_cols=195  Identities=7%  Similarity=-0.007  Sum_probs=115.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-------C--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-------T--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANL   73 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-------~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~   73 (232)
                      .++..|. ++.|+++-...  .|.+++...........       .  ....+.+++.|. .+.||+.... +.|.+.+.
T Consensus       316 ~~i~~D~-~g~lWigt~~~--Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~-~Gl~~~~~  390 (781)
T 3v9f_A          316 RYIFQDS-FNNIWIGTWGG--GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDG-GGINVFEN  390 (781)
T ss_dssp             EEEEECS-SCCEEEEEBSS--CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBS-SCEEEEET
T ss_pred             EEEEEeC-CCCEEEEecCC--eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCC-CcEEEEEC
Confidence            3566676 56666655443  48888777554433321       1  124567888886 4678776533 45788776


Q ss_pred             CCCCCEEEEe---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCCcceEEEeCCCCEEEE
Q psy5751          74 NDDQPKVIVS---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKLPNSLAVDFRTDELCW  149 (232)
Q Consensus        74 ~g~~~~~~~~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~  149 (232)
                      +.........   .......+++.|+ ++.||+....   +-+.+++......+.+.... .......+..|.. +.||+
T Consensus       391 ~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~-g~lwi  465 (781)
T 3v9f_A          391 GKRVAIYNKENRELLSNSVLCSLKDS-EGNLWFGTYL---GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN-KKIWI  465 (781)
T ss_dssp             TEEEEECC-----CCCSBEEEEEECT-TSCEEEEETT---EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT-SEEEE
T ss_pred             CCCeEEEccCCCCCCCcceEEEEECC-CCCEEEEecc---CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC-CCEEE
Confidence            5432211111   1223567888886 7888887643   23777776544333221110 1234567788875 78888


Q ss_pred             EECCCCcEEEEecCCCceEEEec-C-----CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceE
Q psy5751         150 VDADSKSLECMTIRNRVRRKVYS-N-----CTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSI  210 (232)
Q Consensus       150 ~d~~~~~i~~~~~~g~~~~~~~~-~-----~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i  210 (232)
                      +..  +.+.+++.++...+.+.. .     ...+.+++.+ ++.||++-...+ +.++++.+...+.+
T Consensus       466 gt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~  530 (781)
T 3v9f_A          466 GTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKF  530 (781)
T ss_dssp             EET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEE
T ss_pred             EEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEc
Confidence            865  569999988765544432 1     2345677776 678888876444 88898876654433

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.80  E-value=0.017  Score=51.47  Aligned_cols=210  Identities=10%  Similarity=0.038  Sum_probs=122.9

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--------CCCCccEEEEeecCCe-EEEEeCCCCeEEEEeC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT--------NIRSPEGLTFDWVNRV-LYWTDSQMDTISMANL   73 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--------~~~~p~gl~~d~~~~~-ly~~d~~~~~I~~~~~   73 (232)
                      .++..|. ++.||++-...  .|.+++.+..........        ....+.+++.|. .+. ||+... .+.|.+++.
T Consensus       360 ~~i~~d~-~g~lWiGt~~~--Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~-~~Gl~~~d~  434 (795)
T 4a2l_A          360 SCIVEDK-DKNLWIGTNDG--GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTH-AGGLSILHR  434 (795)
T ss_dssp             EEEEECT-TSCEEEEESSS--CEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEET-TTEEEEEET
T ss_pred             EEEEECC-CCCEEEEECCC--CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeC-cCceeEEeC
Confidence            4667776 66677665443  488888775544333211        124567888886 456 766544 356888988


Q ss_pred             CCCCCEEEEeC----CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc----C-CCCCcceEEEeCCC
Q psy5751          74 NDDQPKVIVSK----DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA----A-DLKLPNSLAVDFRT  144 (232)
Q Consensus        74 ~g~~~~~~~~~----~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~----~-~~~~p~~l~~d~~~  144 (232)
                      ++.....+...    .......++.|+ +|.||+....    -+.+.+......+.....    . .......+..|.. 
T Consensus       435 ~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~~----Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-  508 (795)
T 4a2l_A          435 NSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTLS----ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH-  508 (795)
T ss_dssp             TTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEESS----CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT-
T ss_pred             CCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEecC----ceeEEeCCCCeEEEccccccccccCCceEEEEEECCC-
Confidence            76554333210    123567888886 7888887753    288888765443332211    1 0134567888875 


Q ss_pred             CEEEEEECCCCcEEEEecCCCceEEEe---c--CC--CceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEecc-C
Q psy5751         145 DELCWVDADSKSLECMTIRNRVRRKVY---S--NC--TYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDM-M  215 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~~~~~---~--~~--~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~-~  215 (232)
                      ++||++..  +.+.+++.++... .+.   .  .+  ....+++.+ ++.||++-..  .+.++++.+...+.+.... .
T Consensus       509 g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~gl  583 (795)
T 4a2l_A          509 KRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDKQIKRYNTTNGL  583 (795)
T ss_dssp             CCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTTEEEEECGGGTC
T ss_pred             CCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCCcEEEeCCCCCC
Confidence            78988875  5688888876544 332   1  11  224566665 6788887654  5899998765444332211 1


Q ss_pred             CcceeEEEEEEcC
Q psy5751         216 GTTYMYGIAAVPS  228 (232)
Q Consensus       216 ~~~~p~gi~~~~~  228 (232)
                      ......+|+...+
T Consensus       584 ~~~~i~~i~~d~~  596 (795)
T 4a2l_A          584 PNNVVYGILEDSF  596 (795)
T ss_dssp             SCSCEEEEEECTT
T ss_pred             chhheEEEEECCC
Confidence            1234556655543

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=97.79  E-value=0.008  Score=47.47  Aligned_cols=184  Identities=13%  Similarity=0.004  Sum_probs=114.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC----CCeEEEEeCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ----MDTISMANLNDDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~----~~~I~~~~~~g~~   77 (232)
                      ..+++|++..+.|+.+. .++ .|...++........+. ....+..+++.+.++.++.+...    .+.|...++....
T Consensus        77 v~~~~~~~~~~~l~s~~-~dg-~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~  153 (369)
T 3zwl_B           77 IWSIDVDCFTKYCVTGS-ADY-SIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS  153 (369)
T ss_dssp             EEEEEECTTSSEEEEEE-TTT-EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred             EEEEEEcCCCCEEEEEe-CCC-eEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence            35788988666665554 445 79999988655434444 34678899999877766655433    2678877765543


Q ss_pred             C------------EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE-EEEEcCCCCCcceEEEeCC
Q psy5751          78 P------------KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE-IFLKAADLKLPNSLAVDFR  143 (232)
Q Consensus        78 ~------------~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~-~~~~~~~~~~p~~l~~d~~  143 (232)
                      .            ..+.. ........+++++....|+.+..   .+.|...++...... ..+... .....+++++++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~  229 (369)
T 3zwl_B          154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK---DGKISKYDVSNNYEYVDSIDLH-EKSISDMQFSPD  229 (369)
T ss_dssp             TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET---TSEEEEEETTTTTEEEEEEECC-SSCEEEEEECTT
T ss_pred             cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC---CCEEEEEECCCCcEeEEEEecC-CCceeEEEECCC
Confidence            1            11111 12226788999986666666553   467888888863322 223322 456789999998


Q ss_pred             CCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCC
Q psy5751         144 TDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWK  193 (232)
Q Consensus       144 ~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~  193 (232)
                      +..|+.+ ...+.|...+++................+++.  +..++.+...
T Consensus       230 ~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  280 (369)
T 3zwl_B          230 LTYFITS-SRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQ  280 (369)
T ss_dssp             SSEEEEE-ETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECC
T ss_pred             CCEEEEe-cCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecC
Confidence            6666555 55778999998876554444444445566663  4455555443

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=97.79  E-value=0.0087  Score=47.87  Aligned_cols=189  Identities=6%  Similarity=-0.024  Sum_probs=113.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      .++.|.+.+..|+-+. .++ .|...++........+......+..+++.+. .+.++++-...+.|...++........
T Consensus       158 ~~~~~~~~~~~l~t~s-~D~-~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~  235 (354)
T 2pbi_B          158 SACSFTNSDMQILTAS-GDG-TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA  235 (354)
T ss_dssp             EEEEECSSSSEEEEEE-TTS-EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             EEEEEeCCCCEEEEEe-CCC-cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence            3677777666665444 445 7888888765543444433456667777653 234555666678999999887665555


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +........+++++|....|..+..   .+.|...++............ .......+++++++..|+.+ ...+.|...
T Consensus       236 ~~~h~~~v~~v~~~p~~~~l~s~s~---D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g-~~d~~i~vw  311 (354)
T 2pbi_B          236 FETHESDVNSVRYYPSGDAFASGSD---DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG-YNDYTINVW  311 (354)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred             ecCCCCCeEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE-ECCCcEEEE
Confidence            5555567789999985555544443   356888887654333333221 12345789999985555544 556788888


Q ss_pred             ecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcE
Q psy5751         161 TIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRI  197 (232)
Q Consensus       161 ~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i  197 (232)
                      ++..+.. ..+.........+++. ++..+.+-...+.|
T Consensus       312 d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v  350 (354)
T 2pbi_B          312 DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTL  350 (354)
T ss_dssp             ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred             ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCE
Confidence            8865443 3333334445677774 34434443333444

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=97.78  E-value=0.0082  Score=47.21  Aligned_cols=191  Identities=11%  Similarity=-0.015  Sum_probs=113.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|.+....|+-+. .++ .|...++........+......+..+++.+.+..| ++-...+.|...++.+.....+.
T Consensus        69 ~~~~~s~dg~~l~s~s-~D~-~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vwd~~~~~~~~~~  145 (319)
T 3frx_A           69 QDCTLTADGAYALSAS-WDK-TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIKGQCLATLL  145 (319)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEE-EEEETTSCEEEEETTSCEEEEEC
T ss_pred             EEEEECCCCCEEEEEe-CCC-EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEe
Confidence            3577887555555444 445 78888987655434444445678889998855544 46666688999999875443333


Q ss_pred             eCCCCCceEEEEeCCC-----CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          83 SKDLVNPRGIVVHPYY-----RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~-----~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                       ........+++.|..     +.++++...  .+.|...++........+... -...+.+++++++..| .+-...+.|
T Consensus       146 -~h~~~v~~~~~~~~~~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~sp~g~~l-~s~~~dg~i  220 (319)
T 3frx_A          146 -GHNDWVSQVRVVPNEKADDDSVTIISAGN--DKMVKAWNLNQFQIEADFIGH-NSNINTLTASPDGTLI-ASAGKDGEI  220 (319)
T ss_dssp             -CCSSCEEEEEECCC------CCEEEEEET--TSCEEEEETTTTEEEEEECCC-CSCEEEEEECTTSSEE-EEEETTCEE
T ss_pred             -ccCCcEEEEEEccCCCCCCCccEEEEEeC--CCEEEEEECCcchhheeecCC-CCcEEEEEEcCCCCEE-EEEeCCCeE
Confidence             344456677777632     223343322  456888887755433333322 4567899999985555 444567888


Q ss_pred             EEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         158 ECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       158 ~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      ...++...+.............+++.  +..|..+..  ..+..++.+
T Consensus       221 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~--~~i~v~~~~  266 (319)
T 3frx_A          221 MLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA--TGIKVFSLD  266 (319)
T ss_dssp             EEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET--TEEEEEEET
T ss_pred             EEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC--CCcEEEEeC
Confidence            88888866543333333445677774  334444332  334444433

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=97.78  E-value=0.00055  Score=54.94  Aligned_cols=194  Identities=9%  Similarity=-0.023  Sum_probs=105.2

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC---C
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ---P   78 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~   78 (232)
                      +++|++..+.|..+. .++ .|...++++..  ....+......+..+++.+.++.|+ +-...+.|...++....   .
T Consensus        16 ~~~~s~~g~~l~~~~-~d~-~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~d~~v~vwd~~~~~~~~~   92 (377)
T 3dwl_C           16 EHAFNSQRTEFVTTT-ATN-QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIV-TCSQDRNAYVYEKRPDGTWKQ   92 (377)
T ss_dssp             CCEECSSSSEEECCC-SSS-CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEE-EEETTSSEEEC------CCCC
T ss_pred             EEEECCCCCEEEEec-CCC-EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEE-EEeCCCeEEEEEcCCCCceee
Confidence            577888555554432 334 67777776542  2122223345678899988666665 44455788888887655   3


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC----cEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD----REIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~----~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      ...+.........++++|....|+....   .+.|...+++...    ...+ ....-.....+++++++..|..+ ...
T Consensus        93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~-~~d  167 (377)
T 3dwl_C           93 TLVLLRLNRAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWVSKHL-KRPLRSTILSLDWHPNNVLLAAG-CAD  167 (377)
T ss_dssp             EEECCCCSSCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCCCEEE-CSSCCSCEEEEEECTTSSEEEEE-ESS
T ss_pred             eeEecccCCceEEEEECCCCCEEEEEec---CCeEEEEEECCcccceeeeEe-ecccCCCeEEEEEcCCCCEEEEE-eCC
Confidence            3333345556788999986666666554   3457777776654    2322 22124567899999986666555 445


Q ss_pred             CcEEEEecCCCc---------------eEEEe---cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCC
Q psy5751         155 KSLECMTIRNRV---------------RRKVY---SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       155 ~~i~~~~~~g~~---------------~~~~~---~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~  205 (232)
                      +.|...+++...               .....   ........+++. ++.++++-...+.|...+....
T Consensus       168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~  237 (377)
T 3dwl_C          168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP  237 (377)
T ss_dssp             SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred             CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence            667666664211               11122   122234577774 4444444445567777776633

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=97.74  E-value=0.019  Score=50.30  Aligned_cols=196  Identities=8%  Similarity=0.058  Sum_probs=118.9

Q ss_pred             CCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCC-C-----CCccEEEEeecCCeEEEEeCCC----CeEEEEeCCCC
Q psy5751          10 VEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTN-I-----RSPEGLTFDWVNRVLYWTDSQM----DTISMANLNDD   76 (232)
Q Consensus        10 ~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~-~-----~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~~g~   76 (232)
                      ..+++|++.....   +.|++.+..+...+.++..+ +     ....++++.+.++.|.++-...    ..|++.++++.
T Consensus        78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg  157 (695)
T 2bkl_A           78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG  157 (695)
T ss_dssp             ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC
T ss_pred             ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC
Confidence            4567776654321   36899998776655554321 1     1356788888888777664332    47999999887


Q ss_pred             CCE-EEEeCCCCCceEEEEeCCCCeEEEEEcCCC----------CCcEEEEeCCCCCc--EEEEEcCC-CCCcceEEEeC
Q psy5751          77 QPK-VIVSKDLVNPRGIVVHPYYRKLFWSDWNRS----------GPKIEWSNLDGTDR--EIFLKAAD-LKLPNSLAVDF  142 (232)
Q Consensus        77 ~~~-~~~~~~~~~p~~iavd~~~~~ly~~d~~~~----------~~~I~~~~~~g~~~--~~~~~~~~-~~~p~~l~~d~  142 (232)
                      ... ....... ...+++..|.+..||++.....          ..+|++.++.+...  ..+..... -..-.++++++
T Consensus       158 ~~~~~~~~~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp  236 (695)
T 2bkl_A          158 EWSKVDVIEGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR  236 (695)
T ss_dssp             CBCSSCCBSCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT
T ss_pred             CCcCCcccCcc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC
Confidence            642 1011111 1257889987788888876432          35699999887653  33333321 12445889999


Q ss_pred             CCCEEEEEECC---CCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEE-eC--CCCcEEEEeCCCCC
Q psy5751         143 RTDELCWVDAD---SKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWT-DW--KTNRIESANKEGER  206 (232)
Q Consensus       143 ~~~~Ly~~d~~---~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~t-d~--~~~~i~~~~~~g~~  206 (232)
                      ++.+|+++...   ...|+.++..++..+.+..............+.+|++ +.  .+.+|.+++..+..
T Consensus       237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~  306 (695)
T 2bkl_A          237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPA  306 (695)
T ss_dssp             TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred             CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence            98888776432   3478888776555555544333333333343336665 33  35789999987544

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=97.74  E-value=0.01  Score=47.06  Aligned_cols=214  Identities=10%  Similarity=0.035  Sum_probs=126.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      .+++|++..+.|..+. .++ .|...++....    ....+.........+++.+ .+.++ +-...+.|...++.....
T Consensus       101 ~~~~~s~~~~~l~s~~-~d~-~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~-s~s~d~~i~~wd~~~~~~  176 (340)
T 1got_B          101 MTCAYAPSGNYVACGG-LDN-ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIV-TSSGDTTCALWDIETGQQ  176 (340)
T ss_dssp             EEEEECTTSSEEEEEE-TTC-EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TTEEE-EEETTSCEEEEETTTTEE
T ss_pred             EEEEECCCCCEEEEEe-CCC-eEEEEECccCCCcceeEEEecCCCccEEEEEECC-CCcEE-EEECCCcEEEEECCCCcE
Confidence            4677888666555444 344 67777776432    1122233334566677765 34444 555567899999876655


Q ss_pred             EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          79 KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                      ...+.........+++.|. +.++.+...  .+.|...++........+... ....+++++++++..| .+-...+.|.
T Consensus       177 ~~~~~~h~~~v~~~~~~~~-~~~l~sg~~--d~~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l-~s~s~d~~v~  251 (340)
T 1got_B          177 TTTFTGHTGDVMSLSLAPD-TRLFVSGAC--DASAKLWDVREGMCRQTFTGH-ESDINAICFFPNGNAF-ATGSDDATCR  251 (340)
T ss_dssp             EEEECCCSSCEEEEEECTT-SSEEEEEET--TSCEEEEETTTCSEEEEECCC-SSCEEEEEECTTSSEE-EEEETTSCEE
T ss_pred             EEEEcCCCCceEEEEECCC-CCEEEEEeC--CCcEEEEECCCCeeEEEEcCC-cCCEEEEEEcCCCCEE-EEEcCCCcEE
Confidence            5555445567789999984 545554432  456888887765444333322 4567899999985555 4545677888


Q ss_pred             EEecCCCceEEEecC---CCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcC
Q psy5751         159 CMTIRNRVRRKVYSN---CTYPFGLSIT-DEKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~---~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ..+++..........   ......+++. .+.+..+-...+.|...+... .....+.   .+......|++-++
T Consensus       252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~---~h~~~v~~~~~s~d  323 (340)
T 1got_B          252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA---GHDNRVSCLGVTDD  323 (340)
T ss_dssp             EEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTT
T ss_pred             EEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee---cCCCcEEEEEEcCC
Confidence            888876543322221   1234567774 555666666667788887653 3222221   33344555665443

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=97.73  E-value=0.0024  Score=52.65  Aligned_cols=157  Identities=9%  Similarity=0.039  Sum_probs=101.9

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      ..+..|++.+....+..+-...+.|...+++......+..  .+.....+++++|.++.++++-..  .+.|...++.+.
T Consensus       120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~--D~~v~iwd~~~~  197 (435)
T 4e54_B          120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM--EGTTRLQDFKGN  197 (435)
T ss_dssp             SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS--SSCEEEEETTSC
T ss_pred             CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC--CCEEEEeeccCC
Confidence            4578899988666666676677899999988766544443  345567899999866655555433  456888888876


Q ss_pred             CcEEEEEcC-CCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEE
Q psy5751         122 DREIFLKAA-DLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIE  198 (232)
Q Consensus       122 ~~~~~~~~~-~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~  198 (232)
                      ....+.... .......+++++++..| ++-...+.|...++++.....+........++++.  +..++.+-...+.|.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~  276 (435)
T 4e54_B          198 ILRVFASSDTINIWFCSLDVSASSRMV-VTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK  276 (435)
T ss_dssp             EEEEEECCSSCSCCCCCEEEETTTTEE-EEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred             ceeEEeccCCCCccEEEEEECCCCCEE-EEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence            655554432 12234678999985555 45466788999998876543333233445677774  345666655556666


Q ss_pred             EEeCC
Q psy5751         199 SANKE  203 (232)
Q Consensus       199 ~~~~~  203 (232)
                      ..+..
T Consensus       277 iwd~~  281 (435)
T 4e54_B          277 IWDLR  281 (435)
T ss_dssp             EEETT
T ss_pred             EEecc
Confidence            66654

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=97.72  E-value=0.022  Score=50.40  Aligned_cols=194  Identities=12%  Similarity=0.135  Sum_probs=116.8

Q ss_pred             CCCCEEEEEEcCCC---CcEEEEEcC---CCceeEEEeCC-C-----CCccEEEEeecCCeEEEEeCCC----CeEEEEe
Q psy5751           9 CVEGQVYYSSVADK---SSIKRAHLD---GKNVEDVITTN-I-----RSPEGLTFDWVNRVLYWTDSQM----DTISMAN   72 (232)
Q Consensus         9 ~~~~~ly~~d~~~~---~~i~~~~~~---g~~~~~~~~~~-~-----~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~   72 (232)
                      +..+++|++-....   +.|++.+..   +...+.++..+ +     ....++++.+.++.|.++....    ..|++.+
T Consensus       116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d  195 (741)
T 1yr2_A          116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG  195 (741)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence            34567766643222   478999886   55544443321 1     1346778888888777664332    3599999


Q ss_pred             CCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-----------CCcEEEEeCCCCCc--EEEEEcCCC-CCcceE
Q psy5751          73 LNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-----------GPKIEWSNLDGTDR--EIFLKAADL-KLPNSL  138 (232)
Q Consensus        73 ~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-----------~~~I~~~~~~g~~~--~~~~~~~~~-~~p~~l  138 (232)
                      +++........... ...+++..|. +.||++.....           ..+|++.++.+...  ..+.....- ..-.++
T Consensus       196 l~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~  273 (741)
T 1yr2_A          196 VADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA  273 (741)
T ss_dssp             TTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred             CCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence            98876433211111 1246788887 88888865432           44688888865542  333333201 134588


Q ss_pred             EEeCCCCEEEEEEC----CCCcEEEEecCCC--c-eEEEecCCCceEE-EEEECCEEEEEeC---CCCcEEEEeCCC
Q psy5751         139 AVDFRTDELCWVDA----DSKSLECMTIRNR--V-RRKVYSNCTYPFG-LSITDEKYYWTDW---KTNRIESANKEG  204 (232)
Q Consensus       139 ~~d~~~~~Ly~~d~----~~~~i~~~~~~g~--~-~~~~~~~~~~p~g-la~~~~~ly~td~---~~~~i~~~~~~g  204 (232)
                      ++++++.+|+++-.    ....|+.+++++.  . .+.+......... +.-+++.||+...   .+.+|+.++..+
T Consensus       274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~  350 (741)
T 1yr2_A          274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSG  350 (741)
T ss_dssp             EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred             EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            99999888877653    2458999999876  4 4555443222222 2346788877743   245789988875

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.72  E-value=0.023  Score=50.66  Aligned_cols=189  Identities=12%  Similarity=0.093  Sum_probs=115.1

Q ss_pred             EEEEEeCCCCE-EEEEEcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           3 IGITVDCVEGQ-VYYSSVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         3 ~~i~~d~~~~~-ly~~d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      .++..|. ++. ||++-.. + .|++++.++...+.....    ....+.++..|. .+.||++..  +.+++++.+...
T Consensus       409 ~~i~~d~-~g~~lWigt~~-~-Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~  482 (795)
T 4a2l_A          409 KAVYVDE-KKSLVYIGTHA-G-GLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNPEQRS  482 (795)
T ss_dssp             EEEEEET-TTTEEEEEETT-T-EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEETTTTE
T ss_pred             EEEEEcC-CCCEEEEEeCc-C-ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeCCCCe
Confidence            4667776 455 6665433 3 589988876554333221    124567888887 567887765  468888876543


Q ss_pred             CEEEEeC------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE--cC---CCCCcceEEEeCCCCE
Q psy5751          78 PKVIVSK------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK--AA---DLKLPNSLAVDFRTDE  146 (232)
Q Consensus        78 ~~~~~~~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~--~~---~~~~p~~l~~d~~~~~  146 (232)
                      ...+...      .......++.|+ +|.||+....    -+.+.+.++... .+..  ..   ......+|..|.. +.
T Consensus       483 ~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~----Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~-g~  555 (795)
T 4a2l_A          483 FTTIEKEKDGTPVVSKQITTLFRDS-HKRLWIGGEE----GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASN-GI  555 (795)
T ss_dssp             EEECCBCTTCCBCCCCCEEEEEECT-TCCEEEEESS----CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTT-SC
T ss_pred             EEEccccccccccCCceEEEEEECC-CCCEEEEeCC----ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCC-CC
Confidence            3222211      123567888886 7888887752    278877665433 2111  00   0123457777875 78


Q ss_pred             EEEEECCCCcEEEEecCCCceEEEec--CCC--ceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcc
Q psy5751         147 LCWVDADSKSLECMTIRNRVRRKVYS--NCT--YPFGLSIT-DEKYYWTDWKTNRIESANKEGERAP  208 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~g~~~~~~~~--~~~--~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~  208 (232)
                      ||++...  .+.+++.++...+.+..  .++  ...+++.+ +|.||++-  .+.|.++++.+...+
T Consensus       556 lWigT~~--Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~  618 (795)
T 4a2l_A          556 IWVGTRE--GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPETEKFR  618 (795)
T ss_dssp             EEEEESS--CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEE
T ss_pred             EEEEeCC--CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCCCcEE
Confidence            8887653  68899887665554432  232  24567776 67888876  356889988765544

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=97.70  E-value=0.012  Score=46.73  Aligned_cols=193  Identities=8%  Similarity=-0.057  Sum_probs=119.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--E-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--K-   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~-   79 (232)
                      .+++|++..+.|+ +-..++ .|...+.........+......+..+++.+.++.|. +-...+.|...++.....  . 
T Consensus        59 ~~~~~s~d~~~l~-s~s~Dg-~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~v~iw~~~~~~~~~~~  135 (340)
T 1got_B           59 YAMHWGTDSRLLL-SASQDG-KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA-CGGLDNICSIYNLKTREGNVRV  135 (340)
T ss_dssp             EEEEECTTSSEEE-EEETTT-EEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEE-EEETTCEEEEEETTTCSBSCEE
T ss_pred             EEEEECCCCCEEE-EEeCCC-cEEEEECCCCCcceEeecCCccEEEEEECCCCCEEE-EEeCCCeEEEEECccCCCccee
Confidence            4788888555554 444555 788888876554344444445678889988666555 444567888888865431  1 


Q ss_pred             -EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          80 -VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        80 -~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                       ..+.........++..+ .+.|..+..   .+.|...++........+... ......++++++ +.++++-...+.|.
T Consensus       136 ~~~~~~h~~~v~~~~~~~-~~~l~s~s~---d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~-~~~l~sg~~d~~v~  209 (340)
T 1got_B          136 SRELAGHTGYLSCCRFLD-DNQIVTSSG---DTTCALWDIETGQQTTTFTGH-TGDVMSLSLAPD-TRLFVSGACDASAK  209 (340)
T ss_dssp             EEEEECCSSCEEEEEEEE-TTEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred             EEEecCCCccEEEEEECC-CCcEEEEEC---CCcEEEEECCCCcEEEEEcCC-CCceEEEEECCC-CCEEEEEeCCCcEE
Confidence             12223444556677765 566655543   355888887755433333322 445688999997 45555656678888


Q ss_pred             EEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         159 CMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       159 ~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ..++...... .+........++++. ++.++.+-...+.|...+...
T Consensus       210 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~  257 (340)
T 1got_B          210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA  257 (340)
T ss_dssp             EEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             EEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence            8888765543 333334456688885 555566666667788887663

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=97.67  E-value=0.02  Score=48.69  Aligned_cols=193  Identities=5%  Similarity=-0.084  Sum_probs=116.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++|++....|+.+.....  ..|+..+  .......+......+..+++.+.++.++++-...+.|...+........
T Consensus       120 ~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~  197 (615)
T 1pgu_A          120 SDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA  197 (615)
T ss_dssp             EEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE
T ss_pred             EEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee
Confidence            47888887777776664432  1454444  2222223333446778899998766456666677899999987655444


Q ss_pred             EEeCCCC---CceEEEEeCC-CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc---CCCCCcceEEEeCCCCEEEEEECC
Q psy5751          81 IVSKDLV---NPRGIVVHPY-YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA---ADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        81 ~~~~~~~---~p~~iavd~~-~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~---~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      .+.....   ....++++|. ...|+....   .+.|...++........+..   .......+++++ ++..| ++-..
T Consensus       198 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l-~~~~~  272 (615)
T 1pgu_A          198 SDRTHHKQGSFVRDVEFSPDSGEFVITVGS---DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKF-ATVGA  272 (615)
T ss_dssp             EECSSSCTTCCEEEEEECSTTCCEEEEEET---TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEE-EEEET
T ss_pred             eecccCCCCceEEEEEECCCCCCEEEEEeC---CCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEE-EEEcC
Confidence            4443444   5789999996 455555543   35688888876554443311   214566789998 54455 45455


Q ss_pred             CCcEEEEecCCCceEEEecCC-----CceEEEEE-ECCEEEEEeCCCCcEEEEeCC
Q psy5751         154 SKSLECMTIRNRVRRKVYSNC-----TYPFGLSI-TDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       154 ~~~i~~~~~~g~~~~~~~~~~-----~~p~gla~-~~~~ly~td~~~~~i~~~~~~  203 (232)
                      .+.|...+++...........     .....+.+ .++.++... ..+.|...+..
T Consensus       273 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~g~i~~~d~~  327 (615)
T 1pgu_A          273 DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS-LDGTLNFYELG  327 (615)
T ss_dssp             TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE-TTSCEEEEETT
T ss_pred             CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE-CCCCEEEEECC
Confidence            678888888855433222221     23445555 355554444 45677777765

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.67  E-value=0.019  Score=51.00  Aligned_cols=193  Identities=9%  Similarity=0.047  Sum_probs=114.9

Q ss_pred             EEEEe-CCCCEEEEEEcCCC---CcEEEEEcCCC-ceeEEEeCCC-CCccEEEEeecCCeEEEEeCCC----CeEEEEeC
Q psy5751           4 GITVD-CVEGQVYYSSVADK---SSIKRAHLDGK-NVEDVITTNI-RSPEGLTFDWVNRVLYWTDSQM----DTISMANL   73 (232)
Q Consensus         4 ~i~~d-~~~~~ly~~d~~~~---~~i~~~~~~g~-~~~~~~~~~~-~~p~gl~~d~~~~~ly~~d~~~----~~I~~~~~   73 (232)
                      ++.+. +..+.|.++....+   ..|+.+++++. ..   +...+ ....+++..+.++.||++....    ..|++.++
T Consensus       178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~---l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l  254 (751)
T 2xe4_A          178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT---IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM  254 (751)
T ss_dssp             EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC---CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred             eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe---CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence            56788 87777766654332   24999999876 41   11111 1134567777777888875431    36999999


Q ss_pred             CCCCC--EEEEeCC-CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--c--EEEEEcCCCCCcceEEEe-CCCC
Q psy5751          74 NDDQP--KVIVSKD-LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--R--EIFLKAADLKLPNSLAVD-FRTD  145 (232)
Q Consensus        74 ~g~~~--~~~~~~~-~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~--~~~~~~~~~~~p~~l~~d-~~~~  145 (232)
                      ++...  ..+.... ...-.++.++|.++.|+++........|+.+++++..  .  +.+...  ...+. ..++ ..++
T Consensus       255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~-~s~~~~~g~  331 (751)
T 2xe4_A          255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR--EKGVR-YDVQMHGTS  331 (751)
T ss_dssp             TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC--CTTCC-EEEEEETTT
T ss_pred             CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC--CCCce-EEEeeeeCC
Confidence            87642  3444422 2223467789988889988766556789999998752  2  333222  11221 2233 3367


Q ss_pred             EEEEEECC----CCcEEEEecCC-Cc-eE-EEecCCC-ceEEEEEECCEEEEEeCCC--CcEEEEeC
Q psy5751         146 ELCWVDAD----SKSLECMTIRN-RV-RR-KVYSNCT-YPFGLSITDEKYYWTDWKT--NRIESANK  202 (232)
Q Consensus       146 ~Ly~~d~~----~~~i~~~~~~g-~~-~~-~~~~~~~-~p~gla~~~~~ly~td~~~--~~i~~~~~  202 (232)
                      .||+....    ..+|+++++++ .. +. .+..... ...+++++.+.|+++....  .+|..++.
T Consensus       332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred             EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence            78777433    35899999885 33 33 3433322 3356677788888875433  35677774

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=97.67  E-value=0.011  Score=46.22  Aligned_cols=191  Identities=10%  Similarity=0.017  Sum_probs=115.0

Q ss_pred             eEEEEEeCCCC-EEEEEEcCCCCcEEEEEc-CCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC--
Q psy5751           2 LIGITVDCVEG-QVYYSSVADKSSIKRAHL-DGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND--   75 (232)
Q Consensus         2 ~~~i~~d~~~~-~ly~~d~~~~~~i~~~~~-~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g--   75 (232)
                      ..+++|++..+ .|+.+. .++ .|..+++ ++... ..+..  ....+..+++.+ ++.|+ +-...+.|...++..  
T Consensus        59 v~~~~~~~~~~~~l~~~~-~dg-~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~-s~~~d~~i~iwd~~~~~  133 (342)
T 1yfq_A           59 LLCCNFIDNTDLQIYVGT-VQG-EILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLI-AASWDGLIEVIDPRNYG  133 (342)
T ss_dssp             EEEEEEEESSSEEEEEEE-TTS-CEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEE-EEETTSEEEEECHHHHT
T ss_pred             eEEEEECCCCCcEEEEEc-CCC-eEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEE-EEcCCCeEEEEcccccc
Confidence            35788888666 666655 344 7999998 76654 33333  445778899988 66555 555667899888764  


Q ss_pred             -------CCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC-CCc-EEEEEcCCCCCcceEEEeC-CCC
Q psy5751          76 -------DQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG-TDR-EIFLKAADLKLPNSLAVDF-RTD  145 (232)
Q Consensus        76 -------~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g-~~~-~~~~~~~~~~~p~~l~~d~-~~~  145 (232)
                             ......+. ....+..+++++ ++ ++.+..   .+.|...++.. ... ........-..+..+++++ ++.
T Consensus       134 ~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~-l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~  207 (342)
T 1yfq_A          134 DGVIAVKNLNSNNTK-VKNKIFTMDTNS-SR-LIVGMN---NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE  207 (342)
T ss_dssp             TBCEEEEESCSSSSS-SCCCEEEEEECS-SE-EEEEES---TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC
T ss_pred             cccccccCCeeeEEe-eCCceEEEEecC-Cc-EEEEeC---CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC
Confidence                   22111111 344677888886 33 555553   45688888876 322 1222222244678999998 755


Q ss_pred             EEEEEECCCCcEEEEecCCC------c-eEEEecCC---------CceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         146 ELCWVDADSKSLECMTIRNR------V-RRKVYSNC---------TYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       146 ~Ly~~d~~~~~i~~~~~~g~------~-~~~~~~~~---------~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      .++.+ ...+.|...+++..      . ...+....         .....+++. ++.+.++-...+.|...+...
T Consensus       208 ~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~  282 (342)
T 1yfq_A          208 GYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT  282 (342)
T ss_dssp             EEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred             EEEEE-ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence            55544 45677777666543      2 23332221         155677774 455455555567888888763

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=97.66  E-value=0.016  Score=47.02  Aligned_cols=192  Identities=9%  Similarity=0.018  Sum_probs=115.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------------------CCCccEEEEeecCCeEEEEeCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------------------IRSPEGLTFDWVNRVLYWTDSQ   64 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------------------~~~p~gl~~d~~~~~ly~~d~~   64 (232)
                      .+++|++....|..+.  ++ .+...+.........+...                  ...+..+++.+.++.|+ +-..
T Consensus        68 ~~v~fspdg~~la~g~--~~-~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~-s~~~  143 (393)
T 1erj_A           68 CCVKFSNDGEYLATGC--NK-TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA-TGAE  143 (393)
T ss_dssp             CEEEECTTSSEEEEEC--BS-CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE-EEET
T ss_pred             EEEEECCCCCEEEEEc--CC-cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE-EEcC
Confidence            3678888666554432  34 5666666543322222110                  01256788888666555 5555


Q ss_pred             CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751          65 MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT  144 (232)
Q Consensus        65 ~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~  144 (232)
                      .+.|...++........+.........+++.|.+..|+.+..   .+.|...++........+..  ......+++.+.+
T Consensus       144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~  218 (393)
T 1erj_A          144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCSLTLSI--EDGVTTVAVSPGD  218 (393)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEECSTT
T ss_pred             CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeEEEEEc--CCCcEEEEEECCC
Confidence            688999999876655555556667789999986666655543   45688888876544333332  3467788999855


Q ss_pred             CEEEEEECCCCcEEEEecCCCceE-EEec-------CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         145 DELCWVDADSKSLECMTIRNRVRR-KVYS-------NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~~-~~~~-------~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +.++.+-...+.|...+++..... .+..       ......++++. ++.+..+-...+.|...+..
T Consensus       219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~  286 (393)
T 1erj_A          219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ  286 (393)
T ss_dssp             CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence            666666666788888888765432 2211       12234577774 44445555556667766654

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=97.65  E-value=0.015  Score=50.81  Aligned_cols=193  Identities=11%  Similarity=-0.005  Sum_probs=113.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++++++..+.|.-+. .++ .|...++........+......+.++++.+.++.|. +-...+.|...+..+.....+.
T Consensus       434 ~~v~~s~~g~~l~sgs-~Dg-~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~  510 (694)
T 3dm0_A          434 EDVVLSSDGQFALSGS-WDG-ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYTIS  510 (694)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEEC
T ss_pred             EEEEECCCCCEEEEEe-CCC-cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCcceeec
Confidence            4678888555555444 445 788899886554344444456788999988666665 5556678888887665433333


Q ss_pred             e---CCCCCceEEEEeCCCC-eEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          83 S---KDLVNPRGIVVHPYYR-KLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        83 ~---~~~~~p~~iavd~~~~-~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                      .   .+......++++|... .++++-..  .+.|...++........+... ......+++++++..| .+-...+.|.
T Consensus       511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg~~l-~sg~~Dg~i~  586 (694)
T 3dm0_A          511 EGGEGHRDWVSCVRFSPNTLQPTIVSASW--DKTVKVWNLSNCKLRSTLAGH-TGYVSTVAVSPDGSLC-ASGGKDGVVL  586 (694)
T ss_dssp             SSTTSCSSCEEEEEECSCSSSCEEEEEET--TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEE-EEEETTSBCE
T ss_pred             cCCCCCCCcEEEEEEeCCCCcceEEEEeC--CCeEEEEECCCCcEEEEEcCC-CCCEEEEEEeCCCCEE-EEEeCCCeEE
Confidence            2   1233457888887442 23333322  356888888766554444332 4567899999985554 4545677888


Q ss_pred             EEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         159 CMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..++.................+++. ++.+..+ ...+.|...+..
T Consensus       587 iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~~~i~iwd~~  631 (694)
T 3dm0_A          587 LWDLAEGKKLYSLEANSVIHALCFSPNRYWLCA-ATEHGIKIWDLE  631 (694)
T ss_dssp             EEETTTTEEEECCBCSSCEEEEEECSSSSEEEE-EETTEEEEEETT
T ss_pred             EEECCCCceEEEecCCCcEEEEEEcCCCcEEEE-EcCCCEEEEECC
Confidence            8888765432222233334566664 3332222 223445555554

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=97.64  E-value=0.023  Score=48.38  Aligned_cols=195  Identities=12%  Similarity=-0.058  Sum_probs=122.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC----ceeEEEeCCCCC-ccEEEEee--cCCeEEEEeCCCCeEEEEeCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGK----NVEDVITTNIRS-PEGLTFDW--VNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~----~~~~~~~~~~~~-p~gl~~d~--~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      .+++|++..+.|.++.  ++ .|...+++..    .....+...... +..+++.+  .++.|+.+. ..+.|.+.++..
T Consensus        22 ~~~~~spdg~~l~~~~--~~-~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-~dg~v~vw~~~~   97 (615)
T 1pgu_A           22 THLSYDPTTNAIAYPC--GK-SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-ESGKVIVWGWTF   97 (615)
T ss_dssp             CCCEEETTTTEEEEEE--TT-EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-TTSEEEEEEEEE
T ss_pred             eEEEECCCCCEEEEec--CC-eEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-CCCEEEEEeCCC
Confidence            4688999888888877  44 7888888754    333444444455 78999998  777776554 457888888843


Q ss_pred             C--------CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCE
Q psy5751          76 D--------QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        76 ~--------~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~  146 (232)
                      .        .....+.........++++|.+..|+.+....+ .+.|+..+  .......+.. .......+++++++..
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~~  174 (615)
T 1pgu_A           98 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSG-HSQRINACHLKQSRPM  174 (615)
T ss_dssp             EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCS-CSSCEEEEEECSSSSC
T ss_pred             CcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeec-CCccEEEEEECCCCCc
Confidence            2        222233335566789999997776766654311 13455544  2222222222 2456789999998664


Q ss_pred             EEEEECCCCcEEEEecCCCceEEEec-CCC---ceEEEEEE-C-CEEEEEeCCCCcEEEEeCCC
Q psy5751         147 LCWVDADSKSLECMTIRNRVRRKVYS-NCT---YPFGLSIT-D-EKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~---~p~gla~~-~-~~ly~td~~~~~i~~~~~~g  204 (232)
                      ++++-...+.|...+.+......... ...   ....+++. + +.++++-...+.|...+...
T Consensus       175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~  238 (615)
T 1pgu_A          175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS  238 (615)
T ss_dssp             EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT
T ss_pred             EEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence            55666667888888877654433333 333   45678874 4 55555555567888888653

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=97.64  E-value=0.015  Score=46.16  Aligned_cols=194  Identities=7%  Similarity=0.001  Sum_probs=117.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEE--eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVI--TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~--~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      ..+++|++..+.|+.+. .++ .|...++.........  ......+..+++.+.++.|+.+. ..+.|...+++.....
T Consensus        55 v~~~~~~~~~~~l~~~~-~dg-~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~  131 (372)
T 1k8k_C           55 VTGVDWAPDSNRIVTCG-TDR-NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDW  131 (372)
T ss_dssp             EEEEEEETTTTEEEEEE-TTS-CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTE
T ss_pred             ccEEEEeCCCCEEEEEc-CCC-eEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcc
Confidence            35788998666666655 344 6888888765432222  22345778899988666666555 4577888887766532


Q ss_pred             ---EEE-eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC------------------CCCcEEEEEcCCCCCcce
Q psy5751          80 ---VIV-SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD------------------GTDREIFLKAADLKLPNS  137 (232)
Q Consensus        80 ---~~~-~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~------------------g~~~~~~~~~~~~~~p~~  137 (232)
                         ... .........++++|.+..|+....   .+.|...++.                  .......+. ........
T Consensus       132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~  207 (372)
T 1k8k_C          132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC---DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHG  207 (372)
T ss_dssp             EEEEEECTTCCSCEEEEEECTTSSEEEEEET---TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEE
T ss_pred             eeeeeeecccCCCeeEEEEcCCCCEEEEEcC---CCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEE
Confidence               222 233556789999985555555543   3457777753                  111111111 11345789


Q ss_pred             EEEeCCCCEEEEEECCCCcEEEEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         138 LAVDFRTDELCWVDADSKSLECMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       138 l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +++++++..|+.+ ...+.|...+++..+.. .+.........+++. ++.++.+- ..+.|...+...
T Consensus       208 ~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~  274 (372)
T 1k8k_C          208 VCFSANGSRVAWV-SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS  274 (372)
T ss_dssp             EEECSSSSEEEEE-ETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred             EEECCCCCEEEEE-eCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence            9999986666655 45778888888755443 333333445688875 66655555 556666666544

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=97.64  E-value=0.0071  Score=53.50  Aligned_cols=201  Identities=8%  Similarity=0.042  Sum_probs=112.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------------------CCCccEEEEeecCCeEEEEe--
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------------------IRSPEGLTFDWVNRVLYWTD--   62 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------------------~~~p~gl~~d~~~~~ly~~d--   62 (232)
                      ...+|.+..+.|.++.  ++ .|+..++.+.....+...+                  +....+++..+.++.|.++.  
T Consensus       115 ~~~~~SPdG~~la~~~--~~-~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d  191 (740)
T 4a5s_A          115 QWVTWSPVGHKLAYVW--NN-DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN  191 (740)
T ss_dssp             EEEEECSSTTCEEEEE--TT-EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred             eeeEECCCCCEEEEEE--CC-eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEc
Confidence            4667888777776653  24 6888888765543332211                  11223577777777776652  


Q ss_pred             CCC---------------------------------CeEEEEeCCC---C---CCEEEEe-----CCCCCceEEEEeCCC
Q psy5751          63 SQM---------------------------------DTISMANLND---D---QPKVIVS-----KDLVNPRGIVVHPYY   98 (232)
Q Consensus        63 ~~~---------------------------------~~I~~~~~~g---~---~~~~~~~-----~~~~~p~~iavd~~~   98 (232)
                      ...                                 ..|++.++++   .   ....+..     ........++..|.+
T Consensus       192 ~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg  271 (740)
T 4a5s_A          192 DTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE  271 (740)
T ss_dssp             CTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT
T ss_pred             ccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC
Confidence            110                                 1466677776   4   2222211     012223466777744


Q ss_pred             CeEE-EEEcCCCCCcEEEEeCCCCC-------cEEEEEcCCCCC-----cceEEEeCCCCEEE-EEECC--CCcEEEEec
Q psy5751          99 RKLF-WSDWNRSGPKIEWSNLDGTD-------REIFLKAADLKL-----PNSLAVDFRTDELC-WVDAD--SKSLECMTI  162 (232)
Q Consensus        99 ~~ly-~~d~~~~~~~I~~~~~~g~~-------~~~~~~~~~~~~-----p~~l~~d~~~~~Ly-~~d~~--~~~i~~~~~  162 (232)
                      +.++ +....+...+|+..++++..       ...+.....-.+     +...++++++..|+ |....  ..+|+.++.
T Consensus       272 ~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~  351 (740)
T 4a5s_A          272 RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI  351 (740)
T ss_dssp             EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred             eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence            4233 33333334468888877655       222222210111     45788999987776 66433  458999999


Q ss_pred             CCCceEEEecCCCceEEE-EEECCEEEEEeCC------CCcEEEEeCCCCC
Q psy5751         163 RNRVRRKVYSNCTYPFGL-SITDEKYYWTDWK------TNRIESANKEGER  206 (232)
Q Consensus       163 ~g~~~~~~~~~~~~p~gl-a~~~~~ly~td~~------~~~i~~~~~~g~~  206 (232)
                      +|+..+.+....-....+ .++++.||++-..      ...|++++.+|..
T Consensus       352 ~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~  402 (740)
T 4a5s_A          352 DKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYT  402 (740)
T ss_dssp             TCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred             CCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence            988776665432222333 3567889888654      3478888887654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.63  E-value=0.0085  Score=52.66  Aligned_cols=164  Identities=12%  Similarity=0.097  Sum_probs=101.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCC--CcEEEEEcCCC--ceeEEEeCCCCCccEEEEeecCCeEEEEeCC---CCeEEEEeCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADK--SSIKRAHLDGK--NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ---MDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~--~~i~~~~~~g~--~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~---~~~I~~~~~~g   75 (232)
                      .++.+.+..+.|+++.....  ..|+.+++++.  ....+. ......... +++.++.||+....   +.+|+++++++
T Consensus       237 ~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~  314 (693)
T 3iuj_A          237 VGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN  314 (693)
T ss_dssp             EEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred             EEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence            46788888888877654321  27999998764  333333 333333332 55667888877543   47899999988


Q ss_pred             CCC---EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          76 DQP---KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        76 ~~~---~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      ...   +.+........ +  +++.++.|+++.......+|+.++++|...+.+.... .....+++.+++++.|+++-+
T Consensus       315 ~~~~~~~~l~~~~~~~~-~--~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~-~~~~~~~~~~~d~~~l~~~~s  390 (693)
T 3iuj_A          315 PGPAHWRDLIPERQQVL-T--VHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPG-LGSVSGFNGKHDDPALYFGFE  390 (693)
T ss_dssp             CCGGGCEEEECCCSSCE-E--EEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSS-SSEEEECCCCTTCSCEEEEEE
T ss_pred             CCccccEEEecCCCCEE-E--EEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCC-CceEEeeecCCCCCEEEEEec
Confidence            664   55555333233 4  4444788888765433457899999876544432211 222335555667778877743


Q ss_pred             C---CCcEEEEecCCCceEEEec
Q psy5751         153 D---SKSLECMTIRNRVRRKVYS  172 (232)
Q Consensus       153 ~---~~~i~~~~~~g~~~~~~~~  172 (232)
                      .   -..++.++++++..+.+.+
T Consensus       391 s~~tP~~l~~~d~~~g~~~~l~~  413 (693)
T 3iuj_A          391 NYAQPPTLYRFEPKSGAISLYRA  413 (693)
T ss_dssp             CSSSCCEEEEECTTTCCEEEEEC
T ss_pred             CCCCCCEEEEEECCCCeEEEEEe
Confidence            2   3689999998777666643

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=97.59  E-value=0.019  Score=46.24  Aligned_cols=194  Identities=8%  Similarity=-0.017  Sum_probs=115.0

Q ss_pred             EEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-----CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCE
Q psy5751           6 TVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-----TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPK   79 (232)
Q Consensus         6 ~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-----~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~   79 (232)
                      .|.+..+..+++-..++ .|...++........+.     ........+++.+..+.++.+-...+.|...|+.. ....
T Consensus       164 ~~~~~~~~~l~s~s~D~-~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~  242 (380)
T 3iz6_a          164 QYVPDQETRLITGSGDQ-TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV  242 (380)
T ss_dssp             BCCSSSSSCEEEECTTS-CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC
T ss_pred             EEecCCCCEEEEECCCC-cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce
Confidence            34443344344444555 78888887554433332     12235567777665667777877788999999863 3333


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------CCCCcceEEEeCCCCEEEEEECC
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------DLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ..+.........++++| ++..+.+-..  .+.|...++............      .......+++++.+..| ++-..
T Consensus       243 ~~~~~h~~~v~~v~~~p-~~~~l~s~s~--D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~g~~  318 (380)
T 3iz6_a          243 RTYHGHEGDINSVKFFP-DGQRFGTGSD--DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLL-FAGYS  318 (380)
T ss_dssp             EEECCCSSCCCEEEECT-TSSEEEEECS--SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEE-EEECT
T ss_pred             EEECCcCCCeEEEEEec-CCCeEEEEcC--CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEE-EEEEC
Confidence            34444556788999998 4555555433  456888888755433333221      01235789999985555 45566


Q ss_pred             CCcEEEEecCCCceEEEec-----CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         154 SKSLECMTIRNRVRRKVYS-----NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       154 ~~~i~~~~~~g~~~~~~~~-----~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      .+.|...+...........     .......+++. ++..++|-...+.|..-+..+
T Consensus       319 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~  375 (380)
T 3iz6_a          319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG  375 (380)
T ss_dssp             TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred             CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence            7888888887554432221     22334577774 555556656567676666554

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=97.57  E-value=0.02  Score=45.85  Aligned_cols=158  Identities=12%  Similarity=0.065  Sum_probs=97.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCC--eEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNR--VLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~--~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      ..+++|.+.++.++++-..++ .|...+++.......... ......+++.+...  .++++....+.|...++......
T Consensus       102 v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~  179 (408)
T 4a11_B          102 VETVQWYPHDTGMFTSSSFDK-TLKVWDTNTLQTADVFNF-EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS  179 (408)
T ss_dssp             EEEEEECTTCTTCEEEEETTS-EEEEEETTTTEEEEEEEC-SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred             EEEEEEccCCCcEEEEEeCCC-eEEEeeCCCCccceeccC-CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence            357888885555555555556 799999987654444432 34566777766432  24555556688999998876655


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE---------------cCCCCCcceEEEeCCC
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK---------------AADLKLPNSLAVDFRT  144 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~---------------~~~~~~p~~l~~d~~~  144 (232)
                      ..+.........++++|....++++...  .+.|...++..........               .........+++++++
T Consensus       180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  257 (408)
T 4a11_B          180 HILQGHRQEILAVSWSPRYDYILATASA--DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG  257 (408)
T ss_dssp             EEECCCCSCEEEEEECSSCTTEEEEEET--TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS
T ss_pred             eeecCCCCcEEEEEECCCCCcEEEEEcC--CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC
Confidence            5555455677899999966655555433  4557777775443111111               0112346788999976


Q ss_pred             CEEEEEECCCCcEEEEecCC
Q psy5751         145 DELCWVDADSKSLECMTIRN  164 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g  164 (232)
                      ..|+.+ ...+.|...+++.
T Consensus       258 ~~l~~~-~~dg~i~vwd~~~  276 (408)
T 4a11_B          258 LHLLTV-GTDNRMRLWNSSN  276 (408)
T ss_dssp             SEEEEE-ETTSCEEEEETTT
T ss_pred             CEEEEe-cCCCeEEEEECCC
Confidence            666655 3456677777654

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=97.55  E-value=0.054  Score=50.50  Aligned_cols=157  Identities=9%  Similarity=-0.036  Sum_probs=102.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..+++|++....|..+. .++ .|...+.........+......+.++++.+.++.|. +-...+.|.+.++........
T Consensus       618 v~~~~~s~~~~~l~s~~-~d~-~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d~~v~vwd~~~~~~~~~  694 (1249)
T 3sfz_A          618 VYHACFSQDGQRIASCG-ADK-TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA-TCSADKKVKIWDSATGKLVHT  694 (1249)
T ss_dssp             EEEEEECTTSSEEEEEE-TTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEE
T ss_pred             EEEEEECCCCCEEEEEe-CCC-eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEE-EEeCCCeEEEEECCCCceEEE
Confidence            35788998766665554 444 788889876554344444456788999998666665 444567899999987765555


Q ss_pred             EeCCCCCceEEEEeCCCCe-EEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRK-LFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~-ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      +.........+++.+..+. ++.+...  .+.|...+++.......+... .....++++++++..|..+ ...+.|...
T Consensus       695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~--d~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~-s~dg~v~vw  770 (1249)
T 3sfz_A          695 YDEHSEQVNCCHFTNKSNHLLLATGSN--DFFLKLWDLNQKECRNTMFGH-TNSVNHCRFSPDDELLASC-SADGTLRLW  770 (1249)
T ss_dssp             EECCSSCEEEEEECSSSSCCEEEEEET--TSCEEEEETTSSSEEEEECCC-SSCEEEEEECSSTTEEEEE-ESSSEEEEE
T ss_pred             EcCCCCcEEEEEEecCCCceEEEEEeC--CCeEEEEECCCcchhheecCC-CCCEEEEEEecCCCEEEEE-ECCCeEEEE
Confidence            5556667788888875333 3333322  456888888766544433332 4567788999976655544 445666666


Q ss_pred             ecCCC
Q psy5751         161 TIRNR  165 (232)
Q Consensus       161 ~~~g~  165 (232)
                      ++...
T Consensus       771 d~~~~  775 (1249)
T 3sfz_A          771 DVRSA  775 (1249)
T ss_dssp             EGGGT
T ss_pred             eCCCC
Confidence            66543

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=97.53  E-value=0.02  Score=44.92  Aligned_cols=195  Identities=9%  Similarity=0.014  Sum_probs=118.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-----eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-----EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-----~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      .++++.+.+..++++-..++ .|...++.+...     ...+.........+++.+.++.|+ +-...+.|...++....
T Consensus        21 ~~l~~~~~~~~~l~s~s~D~-~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~-s~s~D~~v~~wd~~~~~   98 (319)
T 3frx_A           21 TSLATSAGQPNLLLSASRDK-TLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL-SASWDKTLRLWDVATGE   98 (319)
T ss_dssp             EEEEECSSCTTEEEEEETTS-EEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE
T ss_pred             EEEEccCCCccEEEEecCCc-cEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE-EEeCCCEEEEEECCCCC
Confidence            47788876545555555556 677777653221     112333445778889988666555 55566889999987665


Q ss_pred             CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-----CEEEEEEC
Q psy5751          78 PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-----DELCWVDA  152 (232)
Q Consensus        78 ~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-----~~Ly~~d~  152 (232)
                      ....+.........+++++....|.....   .+.|...++.+.....+...  ......+.+.+..     +.++++-.
T Consensus        99 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~vwd~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~l~s~~  173 (319)
T 3frx_A           99 TYQRFVGHKSDVMSVDIDKKASMIISGSR---DKTIKVWTIKGQCLATLLGH--NDWVSQVRVVPNEKADDDSVTIISAG  173 (319)
T ss_dssp             EEEEEECCSSCEEEEEECTTSCEEEEEET---TSCEEEEETTSCEEEEECCC--SSCEEEEEECCC------CCEEEEEE
T ss_pred             eeEEEccCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeEEEEecc--CCcEEEEEEccCCCCCCCccEEEEEe
Confidence            54445556667889999985555544443   34577788876544333222  3455677776642     23455556


Q ss_pred             CCCcEEEEecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         153 DSKSLECMTIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       153 ~~~~i~~~~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ..+.|...+++........ ........+++. ++.+..+-...+.|...+...
T Consensus       174 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~  227 (319)
T 3frx_A          174 NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA  227 (319)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred             CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence            6778888888765443322 233445677774 455555555567777777663

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=97.51  E-value=0.019  Score=50.91  Aligned_cols=197  Identities=9%  Similarity=0.025  Sum_probs=117.3

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ..+++|++..+.|+.+. .++ .|...++.+....  ..+......+.++++.+.. +.+.++-...+.|...++++...
T Consensus        12 V~~l~~s~dg~~latg~-~dg-~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~   89 (753)
T 3jro_A           12 IHDAVLDYYGKRLATCS-SDK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW   89 (753)
T ss_dssp             EEEECCCSSSCCEEEEE-TTT-EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred             eEEEEECCCCCeEEEEE-CCC-cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence            34788888666555554 445 7888887743322  2233334567888887641 34444555668899999877642


Q ss_pred             --EEEEeCCCCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcCCCCCcceEEEeCC---------
Q psy5751          79 --KVIVSKDLVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAADLKLPNSLAVDFR---------  143 (232)
Q Consensus        79 --~~~~~~~~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~~~~~p~~l~~d~~---------  143 (232)
                        .............++++|.  ...++.+..   .+.|...++....  ........ ......+++++.         
T Consensus        90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~~~~~~~~~~~~-~~~v~~l~~~p~~~~~~~~~~  165 (753)
T 3jro_A           90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEHN  165 (753)
T ss_dssp             EEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSSSCCCCEEEECC-SSCEEEEEECCCC--------
T ss_pred             cccccccCCCCCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecCCCcceeEeecC-CCceEEEEecCcccccccccc
Confidence              2223345567789999986  445554443   4568888876552  22222222 456678888884         


Q ss_pred             ---CCEEEEEECCCCcEEEEecCCCce--EEEe---cCCCceEEEEEE-C---CEEEEEeCCCCcEEEEeCCC
Q psy5751         144 ---TDELCWVDADSKSLECMTIRNRVR--RKVY---SNCTYPFGLSIT-D---EKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       144 ---~~~Ly~~d~~~~~i~~~~~~g~~~--~~~~---~~~~~p~gla~~-~---~~ly~td~~~~~i~~~~~~g  204 (232)
                         ++.+..+-...+.|...+++....  ....   .......++++. .   +.+.++-...+.|...+...
T Consensus       166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~  238 (753)
T 3jro_A          166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN  238 (753)
T ss_dssp             -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred             cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence               234444445567777777765422  1111   233445678874 4   57777766677788877764

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=97.49  E-value=0.04  Score=47.45  Aligned_cols=220  Identities=8%  Similarity=0.021  Sum_probs=129.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-CC-E
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-QP-K   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~-~   79 (232)
                      +..++|++..+.|..+.  .+ .|...++........+.........+++.+.++.|. +-...+.|...++... .. .
T Consensus        21 ~~~~~~spdg~~l~~~~--~~-~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~la-sg~~d~~v~lWd~~~~~~~~~   96 (611)
T 1nr0_A           21 AVVLGNTPAGDKIQYCN--GT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCA-SGDVHGNVRIWDTTQTTHILK   96 (611)
T ss_dssp             CCCCEECTTSSEEEEEE--TT-EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEESSSTTCCEE
T ss_pred             eeEEeeCCCCCEEEeCC--CC-EEEEecCCCcccCeEecCCCCceEEEEECCCCcEEE-EEeCCCCEEEeECCCCcceee
Confidence            45678999777887765  34 788888875444445544456788999999665554 5555688999998533 22 2


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                      ..+........+++++|.+..|..+....+ .+.|+..+. +.....+ .. .....+.+++++++..+..+-+..+.|.
T Consensus        97 ~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l-~g-h~~~v~~v~f~p~~~~~l~s~s~D~~v~  173 (611)
T 1nr0_A           97 TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNL-TG-QARAMNSVDFKPSRPFRIISGSDDNTVA  173 (611)
T ss_dssp             EEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCC-CC-CSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred             EeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCccee-cC-CCCCceEEEECCCCCeEEEEEeCCCeEE
Confidence            233334456789999997666665543311 134554442 1111111 11 1345678999998665556656677777


Q ss_pred             EEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEec----cCCcceeEEEEEEcC
Q psy5751         159 CMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALD----MMGTTYMYGIAAVPS  228 (232)
Q Consensus       159 ~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~----~~~~~~p~gi~~~~~  228 (232)
                      ..+....+.. .+........++++. ++.++.+-...+.|...+.. |.....+...    ..+......+++-++
T Consensus       174 lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd  250 (611)
T 1nr0_A          174 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD  250 (611)
T ss_dssp             EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred             EEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC
Confidence            7776644332 222234446688884 56666666667778888754 3332222110    023445666666544

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=97.47  E-value=0.036  Score=51.71  Aligned_cols=191  Identities=8%  Similarity=-0.041  Sum_probs=114.4

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC------
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ------   77 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~------   77 (232)
                      +++|++....++.+. .++ .|...+++..............+.++++.+.++.|+ +-...+.|...++....      
T Consensus       845 ~~~~sp~~~~l~~~~-~dg-~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~-s~s~dg~v~vw~~~~~~~~~~~~  921 (1249)
T 3sfz_A          845 YCDFSPYDHLAVIAL-SQY-CVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL-TASDDQTIRVWETKKVCKNSAIV  921 (1249)
T ss_dssp             EEEECSSTTEEEEEC-SSS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEEHHHHHSCCSSS
T ss_pred             EEEEcCCCCEEEEEe-CCC-eEEEEEcCCCceeeecCCCccceEEEEECCCCCEEE-EEeCCCeEEEEEccccceeeeec
Confidence            567777666555443 444 688888886554444444556788999998666555 44455677777643210      


Q ss_pred             -----------------------CEEEEe--------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE
Q psy5751          78 -----------------------PKVIVS--------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF  126 (232)
Q Consensus        78 -----------------------~~~~~~--------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~  126 (232)
                                             ...+..        ........++++|....+.....   .+.|...++........
T Consensus       922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~---~g~i~i~d~~~~~~~~~  998 (1249)
T 3sfz_A          922 LKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDE---DGAIKIIELPNNRVFSS  998 (1249)
T ss_dssp             EEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEET---TSCCEEEETTTTSCEEE
T ss_pred             ccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcC---CCCEEEEEcCCCceeee
Confidence                                   000000        01234677889986666666553   35577777765544333


Q ss_pred             EEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         127 LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       127 ~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      .... .....++++++++..|. +-...+.|...++..+....+.........+++. ++.+ ++-...+.|...+..
T Consensus       999 ~~~h-~~~v~~l~~s~dg~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A          999 GVGH-KKAVRHIQFTADGKTLI-SSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRL-LSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp             CCCC-SSCCCCEEECSSSSCEE-EECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEE-EEEESSSEEEEEETT
T ss_pred             cccC-CCceEEEEECCCCCEEE-EEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcE-EEEECCCcEEEEECC
Confidence            3222 45678899999866665 4456788888888876544333333445566665 4444 444445677777765

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=97.45  E-value=0.017  Score=45.23  Aligned_cols=154  Identities=6%  Similarity=-0.081  Sum_probs=96.9

Q ss_pred             CCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC----CEEEEeCCCCCceEEEEeCCCC-eEEEEEcCCCCCcEEEEe
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ----PKVIVSKDLVNPRGIVVHPYYR-KLFWSDWNRSGPKIEWSN  117 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~~p~~iavd~~~~-~ly~~d~~~~~~~I~~~~  117 (232)
                      -..+.++++.+.++.|+.+. ..+.|...+++...    ...+. ........++++|... .|+....   .+.|...+
T Consensus        11 ~~~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~~wd   85 (342)
T 1yfq_A           11 KDYISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTV---QGEILKVD   85 (342)
T ss_dssp             SSCEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEET---TSCEEEEC
T ss_pred             CCcEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcC---CCeEEEEE
Confidence            35678899998667666554 55788888887665    33333 3555778999998655 5666553   45689999


Q ss_pred             C-CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC---------CceEEEecCCCceEEEEEECCEE
Q psy5751         118 L-DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN---------RVRRKVYSNCTYPFGLSITDEKY  187 (232)
Q Consensus       118 ~-~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g---------~~~~~~~~~~~~p~gla~~~~~l  187 (232)
                      + ++.....+.....-.....+++++ ++.|+.+ ...+.|...+++.         ............+.++++..+.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  163 (342)
T 1yfq_A           86 LIGSPSFQALTNNEANLGICRICKYG-DDKLIAA-SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL  163 (342)
T ss_dssp             SSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEE-ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE
T ss_pred             eccCCceEeccccCCCCceEEEEeCC-CCEEEEE-cCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcE
Confidence            8 766553332200145667999999 5666554 5567788877763         22111112334456777776665


Q ss_pred             EEEeCCCCcEEEEeCCC
Q psy5751         188 YWTDWKTNRIESANKEG  204 (232)
Q Consensus       188 y~td~~~~~i~~~~~~g  204 (232)
                      +.+ ...+.|...+...
T Consensus       164 ~~~-~~d~~i~i~d~~~  179 (342)
T 1yfq_A          164 IVG-MNNSQVQWFRLPL  179 (342)
T ss_dssp             EEE-ESTTEEEEEESSC
T ss_pred             EEE-eCCCeEEEEECCc
Confidence            555 4456788888765

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=97.43  E-value=0.052  Score=47.44  Aligned_cols=197  Identities=11%  Similarity=0.045  Sum_probs=125.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      ..++++++.+..++++-..++ .|...++....     ....+......+..+++.+.++.|. +-...+.|.+.++...
T Consensus       385 V~~v~~~~~~~~~l~s~s~D~-~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-sgs~Dg~v~vwd~~~~  462 (694)
T 3dm0_A          385 VTAIATPIDNADIIVSASRDK-SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLAAG  462 (694)
T ss_dssp             EEEEECCTTCCSEEEEEETTS-EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTT
T ss_pred             eEEEEecCCCCCEEEEEeCCC-cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEE-EEeCCCcEEEEECCCC
Confidence            357788876666777766666 78888876422     1223334446788899988666554 6556689999998776


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--CCCCcceEEEeCCC-CEEEEEECC
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--DLKLPNSLAVDFRT-DELCWVDAD  153 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--~~~~p~~l~~d~~~-~~Ly~~d~~  153 (232)
                      .....+..+.....+++++|.+..|..+..   .+.|...+..+.....+....  ......++++++.. ..+.++-+.
T Consensus       463 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~  539 (694)
T 3dm0_A          463 VSTRRFVGHTKDVLSVAFSLDNRQIVSASR---DRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW  539 (694)
T ss_dssp             EEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred             cceeEEeCCCCCEEEEEEeCCCCEEEEEeC---CCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC
Confidence            554445556667889999986666655543   345777776654333332211  12345788898864 234555566


Q ss_pred             CCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         154 SKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       154 ~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      .+.|...+++......... .......+++. ++.+..+-...+.|...+..
T Consensus       540 d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~  591 (694)
T 3dm0_A          540 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA  591 (694)
T ss_dssp             TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred             CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence            7888888888765543333 34445678885 55666666666777777765

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=97.40  E-value=0.032  Score=44.40  Aligned_cols=193  Identities=8%  Similarity=-0.087  Sum_probs=106.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc---eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC--
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN---VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ--   77 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~---~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~--   77 (232)
                      .+++|++..+.|+.+. .++ .|...++....   ....+......+..+++.+.++.|+.+. ..+.|...+++...  
T Consensus        59 ~~~~~s~~~~~l~s~s-~d~-~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~  135 (377)
T 3dwl_C           59 TCVDWAPKSNRIVTCS-QDR-NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDW  135 (377)
T ss_dssp             EEEEECTTTCCEEEEE-TTS-SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----C
T ss_pred             EEEEEeCCCCEEEEEe-CCC-eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccc
Confidence            5788988666665554 344 68888877544   2222223345778888888666666444 45788888887764  


Q ss_pred             -CEEEEeC-CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC---------------cEEEEEc-CCCCCcceEE
Q psy5751          78 -PKVIVSK-DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD---------------REIFLKA-ADLKLPNSLA  139 (232)
Q Consensus        78 -~~~~~~~-~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~---------------~~~~~~~-~~~~~p~~l~  139 (232)
                       ....+.. .......++++|....|.....   .+.|...++....               ...+... ........++
T Consensus       136 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  212 (377)
T 3dwl_C          136 WVSKHLKRPLRSTILSLDWHPNNVLLAAGCA---DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVG  212 (377)
T ss_dssp             CCCEEECSSCCSCEEEEEECTTSSEEEEEES---SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEE
T ss_pred             eeeeEeecccCCCeEEEEEcCCCCEEEEEeC---CCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEE
Confidence             2333333 5567789999985555555543   3456666653211               1111111 1134567899


Q ss_pred             EeCCCCEEEEEECCCCcEEEEecCCCce-----EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         140 VDFRTDELCWVDADSKSLECMTIRNRVR-----RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       140 ~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-----~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++++..|+.+ ...+.|...+++....     ..+........++++. ++.+..+-.. +.+..+...
T Consensus       213 ~sp~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~~~~~~  280 (377)
T 3dwl_C          213 FSPSGNALAYA-GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYN-YSPILLQGN  280 (377)
T ss_dssp             ECTTSSCEEEE-ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESS-SSEEEECCC
T ss_pred             ECCCCCEEEEE-eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcC-CcEEEEEeC
Confidence            99986666655 4566777777775543     2222233445678874 6666665544 445566655

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=97.40  E-value=0.032  Score=44.15  Aligned_cols=194  Identities=8%  Similarity=0.023  Sum_probs=112.6

Q ss_pred             EEEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCce--eEEEeCCCCCccEEEEeec--CCeEEEEeCCCCeEEEEeCCCC
Q psy5751           3 IGITVDCV--EGQVYYSSVADKSSIKRAHLDGKNV--EDVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         3 ~~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .+++|.+.  .+.|+.+. .++ .|...+++....  ..........+..+++.+.  ++.|+ +-...+.|...++...
T Consensus        59 ~~~~~~~~~~~~~l~s~~-~dg-~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~  135 (379)
T 3jrp_A           59 WRVDWAHPKFGTILASCS-YDG-KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLL-VASSDGKVSVVEFKEN  135 (379)
T ss_dssp             EEEEECCGGGCSEEEEEE-TTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSEEEEEECCTT
T ss_pred             EEEEeCCCCCCCEEEEec-cCC-EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEE-EecCCCcEEEEecCCC
Confidence            46777654  45555544 445 688888876542  2223333467888999886  45554 5556688999998776


Q ss_pred             C--CEEEEeCCCCCceEEEEeCC-------------CCeEEEEEcCCCCCcEEEEeCCCCCcE-EEEE--cCCCCCcceE
Q psy5751          77 Q--PKVIVSKDLVNPRGIVVHPY-------------YRKLFWSDWNRSGPKIEWSNLDGTDRE-IFLK--AADLKLPNSL  138 (232)
Q Consensus        77 ~--~~~~~~~~~~~p~~iavd~~-------------~~~ly~~d~~~~~~~I~~~~~~g~~~~-~~~~--~~~~~~p~~l  138 (232)
                      .  ..............++++|.             ...|.....   .+.|...++...... .+..  .........+
T Consensus       136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~  212 (379)
T 3jrp_A          136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV  212 (379)
T ss_dssp             SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred             CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC---CCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence            3  33444455566789999984             444444443   345777776544322 1211  1113456789


Q ss_pred             EEeCCC--CEEEEEECCCCcEEEEecCCCc---eEEEecC---CCceEEEEEE-CC-EEEEEeCCCCcEEEEeCC
Q psy5751         139 AVDFRT--DELCWVDADSKSLECMTIRNRV---RRKVYSN---CTYPFGLSIT-DE-KYYWTDWKTNRIESANKE  203 (232)
Q Consensus       139 ~~d~~~--~~Ly~~d~~~~~i~~~~~~g~~---~~~~~~~---~~~p~gla~~-~~-~ly~td~~~~~i~~~~~~  203 (232)
                      +++++.  +.+..+-...+.|...+++...   ...+...   ......+++. ++ .|+.+.. .+.|...+..
T Consensus       213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~  286 (379)
T 3jrp_A          213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN  286 (379)
T ss_dssp             EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred             EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence            999983  4555555567778777777543   2333332   2334577774 44 4444443 5666666654

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=97.39  E-value=0.029  Score=43.54  Aligned_cols=196  Identities=13%  Similarity=0.027  Sum_probs=110.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc----eeEEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~----~~~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      ..+++|++....|+.+. .++ .|...+++...    ....+......+..+++.+. .+.++++-...+.|...+++..
T Consensus        14 v~~~~~~~~~~~l~~~~-~dg-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~   91 (351)
T 3f3f_A           14 VHDVVYDFYGRHVATCS-SDQ-HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD   91 (351)
T ss_dssp             EEEEEECSSSSEEEEEE-TTS-EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred             eeEEEEcCCCCEEEEee-CCC-eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence            35789998666665554 444 68888887432    11222334467788888774 2344445555678998888765


Q ss_pred             CC---------EEEEeCCCCCceEEEEeCC--CCeEEEEEcCCCCCcEEEEeCCCCCc-EEE-----EEc------CCCC
Q psy5751          77 QP---------KVIVSKDLVNPRGIVVHPY--YRKLFWSDWNRSGPKIEWSNLDGTDR-EIF-----LKA------ADLK  133 (232)
Q Consensus        77 ~~---------~~~~~~~~~~p~~iavd~~--~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~-----~~~------~~~~  133 (232)
                      ..         ...+........+++++|.  ...|+.+..   .+.|...++..... ..+     ...      ....
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (351)
T 3f3f_A           92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQ  168 (351)
T ss_dssp             SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSC
T ss_pred             cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCCChHHhccccccccccccccccCCccc
Confidence            31         2233345566789999986  455555543   45677777654321 100     000      1134


Q ss_pred             CcceEEEeCC---CCEEEEEECCCCcEEEEecCCCceEEEec---CCCceEEEEEE-CC----EEEEEeCCCCcEEEEeC
Q psy5751         134 LPNSLAVDFR---TDELCWVDADSKSLECMTIRNRVRRKVYS---NCTYPFGLSIT-DE----KYYWTDWKTNRIESANK  202 (232)
Q Consensus       134 ~p~~l~~d~~---~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~---~~~~p~gla~~-~~----~ly~td~~~~~i~~~~~  202 (232)
                      ....+++++.   ...|..+. ..+.+............+..   ......++++. .+    .++.+-...+.|...+.
T Consensus       169 ~~~~~~~~p~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~  247 (351)
T 3f3f_A          169 SDFCLSWCPSRFSPEKLAVSA-LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKI  247 (351)
T ss_dssp             CCEEEEECCCSSSCCEEEEEE-TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEE
T ss_pred             ceeEEEeccCCCCCcEEEEec-CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeC
Confidence            5568888875   45555444 34444443444333322322   23345677775 33    66666666677777766


Q ss_pred             C
Q psy5751         203 E  203 (232)
Q Consensus       203 ~  203 (232)
                      .
T Consensus       248 ~  248 (351)
T 3f3f_A          248 T  248 (351)
T ss_dssp             E
T ss_pred             C
Confidence            5

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=97.34  E-value=0.042  Score=44.20  Aligned_cols=111  Identities=9%  Similarity=0.075  Sum_probs=68.6

Q ss_pred             CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR  165 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~  165 (232)
                      ....+++.+.++.++.+-..  .+.|...++...  ....+ .. .....+.+++++++. .+.+-+..+.|...++..+
T Consensus       207 ~v~~~~~~~~~~~~l~sgs~--D~~v~~wd~~~~~~~~~~~-~~-h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~  281 (380)
T 3iz6_a          207 DVLSLSINSLNANMFISGSC--DTTVRLWDLRITSRAVRTY-HG-HEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTG  281 (380)
T ss_dssp             CEEEEEECSSSCCEEEEEET--TSCEEEEETTTTCCCCEEE-CC-CSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTT
T ss_pred             CeEEEEeecCCCCEEEEEEC--CCeEEEEECCCCCcceEEE-CC-cCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCC
Confidence            44567777656666666543  456777777532  22322 22 145678999999854 4456677888999998866


Q ss_pred             ceEEEecC--------CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         166 VRRKVYSN--------CTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       166 ~~~~~~~~--------~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ........        .....++++. .+.+.++-...+.|...+..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~  328 (380)
T 3iz6_a          282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL  328 (380)
T ss_dssp             EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred             cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence            54333221        1124577774 56666666667888888765

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=97.33  E-value=0.036  Score=43.24  Aligned_cols=195  Identities=11%  Similarity=0.009  Sum_probs=107.5

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++.|.+....|+.+. .++ .|.......................+...+.++.|+ +-...+.+...+..+.......
T Consensus        90 ~~~~~s~dg~~l~s~~-~d~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~s~d~~~~~~d~~~~~~~~~~  166 (340)
T 4aow_A           90 SDVVISSDGQFALSGS-WDG-TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV-SGSRDKTIKLWNTLGVCKYTVQ  166 (340)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEEC
T ss_pred             EEEEECCCCCEEEEEc-ccc-cceEEeecccceeeeecCCCCceeEEEEeecCccce-eecCCCeEEEEEeCCCceEEEE
Confidence            4678887555555444 344 677777776554444444445556666666555554 4445567777777665443332


Q ss_pred             e-CCCCCceEEEEeCCCCe-EEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          83 S-KDLVNPRGIVVHPYYRK-LFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        83 ~-~~~~~p~~iavd~~~~~-ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      . ........+++.+.... ++++...  .+.|...++........+... -...+.+++++++..|+ +-...+.|...
T Consensus       167 ~~~~~~~v~~~~~~~~~~~~~~~s~~~--d~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~-s~s~Dg~i~iw  242 (340)
T 4aow_A          167 DESHSEWVSCVRFSPNSSNPIIVSCGW--DKLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCA-SGGKDGQAMLW  242 (340)
T ss_dssp             SSSCSSCEEEEEECSCSSSCEEEEEET--TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEE-EEETTCEEEEE
T ss_pred             eccccCcccceEEccCCCCcEEEEEcC--CCEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEE-EEeCCCeEEEE
Confidence            2 23344566677654433 3333322  355777777755443333322 34567899999855554 44557788888


Q ss_pred             ecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +++................+++..+..+++-...+.|...+..+
T Consensus       243 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~  286 (340)
T 4aow_A          243 DLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEG  286 (340)
T ss_dssp             ETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred             EeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCC
Confidence            88865543333333334455553222233333345565555543

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=97.32  E-value=0.039  Score=48.92  Aligned_cols=195  Identities=8%  Similarity=-0.006  Sum_probs=114.7

Q ss_pred             EEEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeec--CCeEEEEeCCCCeEEEEeCCCC
Q psy5751           3 IGITVDCV--EGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         3 ~~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .+++|.+.  .+.|+.+. .++ .|...++++....  .........+..+++.+.  ++.+ ++-...+.|...++...
T Consensus        57 ~~l~~s~~~~~~~l~s~s-~Dg-~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l-~sgs~dg~I~vwdl~~~  133 (753)
T 3jro_A           57 WRVDWAHPKFGTILASCS-YDG-KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL-LVASSDGKVSVVEFKEN  133 (753)
T ss_dssp             EEEEECCTTSCSEEEEEE-TTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEECCSS
T ss_pred             EEEEecCCCCCCEEEEEe-CCC-eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEE-EEEeCCCcEEEEEeecC
Confidence            47788765  44454444 445 6888888765422  223334467888999886  4444 45556689999998776


Q ss_pred             C--CEEEEeCCCCCceEEEEeCC-------------CCeEEEEEcCCCCCcEEEEeCCCCCcE--EEEE-cCCCCCcceE
Q psy5751          77 Q--PKVIVSKDLVNPRGIVVHPY-------------YRKLFWSDWNRSGPKIEWSNLDGTDRE--IFLK-AADLKLPNSL  138 (232)
Q Consensus        77 ~--~~~~~~~~~~~p~~iavd~~-------------~~~ly~~d~~~~~~~I~~~~~~g~~~~--~~~~-~~~~~~p~~l  138 (232)
                      .  ..............++.+|.             ...|..+..   .+.|...++......  .... ...-....++
T Consensus       134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~---dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l  210 (753)
T 3jro_A          134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV  210 (753)
T ss_dssp             SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET---TSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred             CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC---CCeEEEEeccCCcccceeeeeecCCCCcEEEE
Confidence            3  23334445566788999874             344444443   345777766544322  2111 1113456789


Q ss_pred             EEeCCC--CEEEEEECCCCcEEEEecCCCceE---EEec---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         139 AVDFRT--DELCWVDADSKSLECMTIRNRVRR---KVYS---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       139 ~~d~~~--~~Ly~~d~~~~~i~~~~~~g~~~~---~~~~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++++.  +.+..+-...+.|...+++.....   .+..   ......++++. ++..+++-...+.|...+..
T Consensus       211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~  284 (753)
T 3jro_A          211 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (753)
T ss_dssp             EECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred             EeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence            999983  455555556777888877754211   1211   22334577774 55555555556777777765

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=97.27  E-value=0.044  Score=44.60  Aligned_cols=157  Identities=10%  Similarity=0.032  Sum_probs=90.9

Q ss_pred             CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC-CCCEEEE-------eCCCCCceEEEEeCCC-CeEEEEEcCCCCCc
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND-DQPKVIV-------SKDLVNPRGIVVHPYY-RKLFWSDWNRSGPK  112 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~-------~~~~~~p~~iavd~~~-~~ly~~d~~~~~~~  112 (232)
                      ....+..+++.+.++.|. +- ..+.|...++.. .....++       .........++++|.+ ..|+....   .+.
T Consensus       176 h~~~v~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---dg~  250 (447)
T 3dw8_B          176 HTYHINSISINSDYETYL-SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS---KGT  250 (447)
T ss_dssp             CSSCCCEEEECTTSSEEE-EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET---TSC
T ss_pred             CCcceEEEEEcCCCCEEE-Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC---CCe
Confidence            345678899998655554 44 578999999883 2222222       1234457899999865 44444443   356


Q ss_pred             EEEEeCCCCCc----EEEEEcCCCC------------CcceEEEeCCCCEEEEEECCCCcEEEEecCC-Cc-eEEEecC-
Q psy5751         113 IEWSNLDGTDR----EIFLKAADLK------------LPNSLAVDFRTDELCWVDADSKSLECMTIRN-RV-RRKVYSN-  173 (232)
Q Consensus       113 I~~~~~~g~~~----~~~~~~~~~~------------~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-~~-~~~~~~~-  173 (232)
                      |...++.....    ...+... ..            ....+++++++..|..+..  +.|...+++. .. ...+... 
T Consensus       251 i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~  327 (447)
T 3dw8_B          251 IRLCDMRASALCDRHSKLFEEP-EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHE  327 (447)
T ss_dssp             EEEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCG
T ss_pred             EEEEECcCCccccceeeEeccC-CCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccc
Confidence            88888776543    2222221 21            5689999998666665554  8888888864 22 2222111 


Q ss_pred             -CCc-------------eEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         174 -CTY-------------PFGLSIT-DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       174 -~~~-------------p~gla~~-~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                       ...             ...+++. ++...++-...+.|...+..+..
T Consensus       328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~  375 (447)
T 3dw8_B          328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR  375 (447)
T ss_dssp             GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred             cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence             000             1236663 33334555556777777766443

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=97.22  E-value=0.046  Score=42.37  Aligned_cols=157  Identities=13%  Similarity=0.041  Sum_probs=86.6

Q ss_pred             eEEEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCc---------eeEEEeCCCCCccEEEEeec--CCeEEEEeCCCCeE
Q psy5751           2 LIGITVDCV--EGQVYYSSVADKSSIKRAHLDGKN---------VEDVITTNIRSPEGLTFDWV--NRVLYWTDSQMDTI   68 (232)
Q Consensus         2 ~~~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~---------~~~~~~~~~~~p~gl~~d~~--~~~ly~~d~~~~~I   68 (232)
                      ..+++|.+.  .+.|+.+. .++ .|...+++...         ....+......+.++++.+.  ++.|+ +-...+.|
T Consensus        60 v~~~~~~~~~d~~~l~s~~-~dg-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~v  136 (351)
T 3f3f_A           60 IVAIDWASPEYGRIIASAS-YDK-TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA-CLGNDGIL  136 (351)
T ss_dssp             EEEEEECCGGGCSEEEEEE-TTS-CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTCEE
T ss_pred             EEEEEEcCCCCCCEEEEEc-CCC-eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE-EecCCCcE
Confidence            357888874  44444444 445 68888887542         11223333467788999886  55555 44456789


Q ss_pred             EEEeCCCCCC-EEE-----Ee-------CCCCCceEEEEeCC---CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CC
Q psy5751          69 SMANLNDDQP-KVI-----VS-------KDLVNPRGIVVHPY---YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-AD  131 (232)
Q Consensus        69 ~~~~~~g~~~-~~~-----~~-------~~~~~p~~iavd~~---~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~  131 (232)
                      ...++..... ..+     ..       ........++.+|.   ...|..+...   +.+............+... ..
T Consensus       137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~h  213 (351)
T 3f3f_A          137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE---QAIIYQRGKDGKLHVAAKLPGH  213 (351)
T ss_dssp             EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT---EEEEEEECTTSCEEEEEECCCC
T ss_pred             EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC---CcEEEEccCCCceeeeeecCCC
Confidence            9999765431 110     00       23445577888875   4445444432   2343333333333222222 11


Q ss_pred             CCCcceEEEeCCCC---EEEEEECCCCcEEEEecCC
Q psy5751         132 LKLPNSLAVDFRTD---ELCWVDADSKSLECMTIRN  164 (232)
Q Consensus       132 ~~~p~~l~~d~~~~---~Ly~~d~~~~~i~~~~~~g  164 (232)
                      -....++++++.++   .++.+-...+.|...+++.
T Consensus       214 ~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~  249 (351)
T 3f3f_A          214 KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE  249 (351)
T ss_dssp             CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred             CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence            34567899999852   5555555566676666654

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.22  E-value=0.035  Score=41.54  Aligned_cols=144  Identities=13%  Similarity=0.023  Sum_probs=89.3

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-------ceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC--C
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGK-------NVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL--N   74 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-------~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~--~   74 (232)
                      .++|++ ++.||.+  .++ .|++.+....       ....+-..+-+.-..+.+|+ ++.||.+  .++.|++.+.  +
T Consensus        45 ~laf~P-~G~LYaV--~~G-~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           45 FLFLSP-GGELYGV--LND-KIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             EEEECT-TSCEEEE--ETT-EEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCCS
T ss_pred             eEEECC-CccEEEE--eCC-eEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEe--CCCEEEEeCCCcC
Confidence            689999 8899998  445 8999987531       11233233334457788997 7889988  3389999986  3


Q ss_pred             CCC-----CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC-CC------CcEEEEEcCCCCCcceEEEeC
Q psy5751          75 DDQ-----PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD-GT------DREIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        75 g~~-----~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~-g~------~~~~~~~~~~~~~p~~l~~d~  142 (232)
                      +..     -..+.......-..++.+| +|.||-.. +   +++++...- +.      ..+.+.... -..-.-+.+++
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-d---g~lyr~~~P~~~~~~wl~~~~~~g~~g-~~~yr~l~f~~  191 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-G---QQFYKALPPVSNQDNWLARATKIGQGG-WDTFKFLFFSS  191 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-T---TEEEEECCCSSTTCCHHHHCEEEESSS-GGGEEEEEECT
T ss_pred             CCCceeccccEeccCCCCceEEEEECC-CceEEEEe-C---CcEEecCCCCCCCcccccccceeccCC-cceEEEEEECC
Confidence            332     2334444556678899998 89999888 4   347664432 11      112222121 11112245555


Q ss_pred             CCCEEEEEECCCCcEEEEecC
Q psy5751         143 RTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus       143 ~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      . +.||.++  .+++++...+
T Consensus       192 ~-G~l~~v~--~g~~Y~~~~p  209 (236)
T 1tl2_A          192 V-GTLFGVQ--GGKFYEDYPP  209 (236)
T ss_dssp             T-SCEEEEE--TTEEEEESCC
T ss_pred             C-CcEEEEe--CCeEEecCCc
Confidence            4 7888887  6778777555

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=97.21  E-value=0.063  Score=43.68  Aligned_cols=203  Identities=7%  Similarity=0.048  Sum_probs=115.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-----------eeEEEeCCC------------CCccEEEEeecCC-e
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-----------VEDVITTNI------------RSPEGLTFDWVNR-V   57 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-----------~~~~~~~~~------------~~p~gl~~d~~~~-~   57 (232)
                      ..+++|++..+.|..+. .++ .|...+++...           ....+....            ..+..+++.+.++ .
T Consensus        31 V~~v~~s~~g~~la~g~-~dg-~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~  108 (447)
T 3dw8_B           31 ISTVEFNHSGELLATGD-KGG-RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA  108 (447)
T ss_dssp             EEEEEECSSSSEEEEEE-TTS-EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred             EEEEEECCCCCEEEEEc-CCC-eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence            35789999666665554 344 68888877543           122222222            4578899988652 3


Q ss_pred             EEEEeCCCCeEEEEeCCCCCCE----------------------------------------EEEeCCCCCceEEEEeCC
Q psy5751          58 LYWTDSQMDTISMANLNDDQPK----------------------------------------VIVSKDLVNPRGIVVHPY   97 (232)
Q Consensus        58 ly~~d~~~~~I~~~~~~g~~~~----------------------------------------~~~~~~~~~p~~iavd~~   97 (232)
                      .+++-...+.|...++......                                        .+..........++++|.
T Consensus       109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~  188 (447)
T 3dw8_B          109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD  188 (447)
T ss_dssp             EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred             eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence            4445556677877776542210                                        112234556789999984


Q ss_pred             CCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEE------cCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce---
Q psy5751          98 YRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLK------AADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR---  167 (232)
Q Consensus        98 ~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~------~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~---  167 (232)
                       +.++.+. .  .+.|...++..... ..++.      ...-.....+++++.+..++.+-...+.|...+++....   
T Consensus       189 -~~~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  264 (447)
T 3dw8_B          189 -YETYLSA-D--DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR  264 (447)
T ss_dssp             -SSEEEEE-C--SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred             -CCEEEEe-C--CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence             5555554 2  56788888873222 11110      111345689999998634555556678888888886553   


Q ss_pred             --EEEecCCC------------ceEEEEEE-CCEEEEEeCCCCcEEEEeCC--CCCcceEE
Q psy5751         168 --RKVYSNCT------------YPFGLSIT-DEKYYWTDWKTNRIESANKE--GERAPSIA  211 (232)
Q Consensus       168 --~~~~~~~~------------~p~gla~~-~~~ly~td~~~~~i~~~~~~--g~~~~~i~  211 (232)
                        ..+.....            ....+++. ++.+..+-.. +.|...+..  +.....+.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~  324 (447)
T 3dw8_B          265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ  324 (447)
T ss_dssp             TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred             eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence              33432222            45678885 4444444444 778777765  44444443

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=97.21  E-value=0.053  Score=42.84  Aligned_cols=191  Identities=12%  Similarity=0.039  Sum_probs=106.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++....|+ +-..++ .|...++........+......+.++++.+.++.|+ +-...+.|...++.+.......
T Consensus        80 ~~~~~~~~~~~l~-s~s~D~-~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~-s~~~d~~i~~wd~~~~~~~~~~  156 (343)
T 2xzm_R           80 SDLALSQENCFAI-SSSWDK-TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQIL-SAGAEREIKLWNILGECKFSSA  156 (343)
T ss_dssp             EEEEECSSTTEEE-EEETTS-EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEE-EEETTSCEEEEESSSCEEEECC
T ss_pred             EEEEECCCCCEEE-EEcCCC-cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEE-EEcCCCEEEEEeccCCceeeee
Confidence            4678887555554 444455 788888875543334444446788999998776665 4445678999998754322211


Q ss_pred             e--CCCCCceEEEEeCCC----------CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEE
Q psy5751          83 S--KDLVNPRGIVVHPYY----------RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        83 ~--~~~~~p~~iavd~~~----------~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      .  ........++..|..          ..|.....   .+.|...+..+.....+ ... -.....+++++++..|. +
T Consensus       157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~-~~h-~~~v~~~~~s~~g~~l~-s  230 (343)
T 2xzm_R          157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW---DGRLKVWNTNFQIRYTF-KAH-ESNVNHLSISPNGKYIA-T  230 (343)
T ss_dssp             TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET---TSEEEEEETTTEEEEEE-ECC-SSCEEEEEECTTSSEEE-E
T ss_pred             cccCCCceeeeeeeccccccccccCCCCCEEEEEcC---CCEEEEEcCCCceeEEE-cCc-cccceEEEECCCCCEEE-E
Confidence            1  122334567777643          23333332   35677777543322222 221 45678999999855554 4


Q ss_pred             ECCCCcEEEEecC-CCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         151 DADSKSLECMTIR-NRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       151 d~~~~~i~~~~~~-g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      -...+.|...++. ................+++. .+.+. +-...+.|...+..
T Consensus       231 gs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~l-a~~~d~~v~iw~~~  284 (343)
T 2xzm_R          231 GGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWV-AVGTDQGVKIFNLM  284 (343)
T ss_dssp             EETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEE-EEEESSCEEEEESS
T ss_pred             EcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEE-EEECCCCEEEEEeC
Confidence            4567788888874 33222222222335677774 33322 22234456666655

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=97.21  E-value=0.057  Score=43.05  Aligned_cols=196  Identities=7%  Similarity=-0.091  Sum_probs=120.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC----
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ----   77 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~----   77 (232)
                      ..+++|++....|+-+ ..++ .|...+.........+.........+++.+.+..| .+-...+.+...++....    
T Consensus        67 V~~~~~s~d~~~l~s~-s~Dg-~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-asg~~d~~i~v~~~~~~~~~~~  143 (354)
T 2pbi_B           67 VLCMDWCKDKRRIVSS-SQDG-KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI-ACGGLDNKCSVYPLTFDKNENM  143 (354)
T ss_dssp             EEEEEECTTSSEEEEE-ETTS-EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEE-EEESTTSEEEEEECCCCTTCCS
T ss_pred             EEEEEECCCCCEEEEE-eCCC-eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEE-EEeeCCCCEEEEEEeccccccc
Confidence            3578898866555544 4455 78888877555444444445678899999865544 466666788888765321    


Q ss_pred             --CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC-CCEEEEEECCC
Q psy5751          78 --PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR-TDELCWVDADS  154 (232)
Q Consensus        78 --~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~-~~~Ly~~d~~~  154 (232)
                        ....+.........+++.+....|+.+..   .+.|...++........+... -.....+++.+. .+.++++-...
T Consensus       144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~---D~~v~lwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~g~~l~sgs~D  219 (354)
T 2pbi_B          144 AAKKKSVAMHTNYLSACSFTNSDMQILTASG---DGTCALWDVESGQLLQSFHGH-GADVLCLDLAPSETGNTFVSGGCD  219 (354)
T ss_dssp             GGGCEEEEECSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECC-SSCEEEEEECCCSSCCEEEEEETT
T ss_pred             cccceeeeccCCcEEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEcCC-CCCeEEEEEEeCCCCCEEEEEeCC
Confidence              11222224456678888886666665553   356888888765544333332 344567788774 24555555667


Q ss_pred             CcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCC
Q psy5751         155 KSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +.|...+++......... ......++++. ++.++.+-...+.|...+...
T Consensus       220 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~  271 (354)
T 2pbi_B          220 KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA  271 (354)
T ss_dssp             SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence            889999988665433333 33445677775 455555555567777777653

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=97.20  E-value=0.0029  Score=55.53  Aligned_cols=197  Identities=6%  Similarity=-0.037  Sum_probs=110.7

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC------------------CCccEEEEeecCCeEEEEeCCC
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI------------------RSPEGLTFDWVNRVLYWTDSQM   65 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~------------------~~p~gl~~d~~~~~ly~~d~~~   65 (232)
                      +++|.+..+.|.++.  ++ .|+..++.+.....+...+-                  ....++++.+.++.|+++....
T Consensus       114 ~~~~SPDG~~la~~~--~~-~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~  190 (719)
T 1z68_A          114 YLCWSPVGSKLAYVY--QN-NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND  190 (719)
T ss_dssp             CEEECSSTTCEEEEE--TT-EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred             cceECCCCCEEEEEE--CC-eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence            467888777777764  34 78888887655433322211                  1124788888888887764221


Q ss_pred             ---------------------------------CeEEEEeCCCCCCE---EEE-----eCCCCCceEEEEeCCCCeEEEE
Q psy5751          66 ---------------------------------DTISMANLNDDQPK---VIV-----SKDLVNPRGIVVHPYYRKLFWS  104 (232)
Q Consensus        66 ---------------------------------~~I~~~~~~g~~~~---~~~-----~~~~~~p~~iavd~~~~~ly~~  104 (232)
                                                       ..|.+.++++....   .+.     .........++..|. +.+.++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~  269 (719)
T 1z68_A          191 TDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQ  269 (719)
T ss_dssp             TTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEE
T ss_pred             CCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEE
Confidence                                             15666777664421   111     012223467888885 666665


Q ss_pred             --EcCCCCCcEEEEe----CCCCCcEEEE----EcCCCCCcc-----eEEEeCCCCEEEEE-ECC--CCcEEEEecCCCc
Q psy5751         105 --DWNRSGPKIEWSN----LDGTDREIFL----KAADLKLPN-----SLAVDFRTDELCWV-DAD--SKSLECMTIRNRV  166 (232)
Q Consensus       105 --d~~~~~~~I~~~~----~~g~~~~~~~----~~~~~~~p~-----~l~~d~~~~~Ly~~-d~~--~~~i~~~~~~g~~  166 (232)
                        +......+|+..+    +++.....+.    ... -....     .++++++++.|++. ...  ..+|+.++++++.
T Consensus       270 ~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~  348 (719)
T 1z68_A          270 WLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESR-TGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN  348 (719)
T ss_dssp             EEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECS-SSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred             EeccccCeEEEEEEcccCCCCCCceEEEEecccccC-CceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence              3222234688888    6544332222    111 11222     77899988877763 322  3479999998876


Q ss_pred             eEEEecCCCceEEEEE-ECCEEEEEeCC------CCcEEEEeCCCC
Q psy5751         167 RRKVYSNCTYPFGLSI-TDEKYYWTDWK------TNRIESANKEGE  205 (232)
Q Consensus       167 ~~~~~~~~~~p~gla~-~~~~ly~td~~------~~~i~~~~~~g~  205 (232)
                      .+.+........++.. +++.||++...      ...+++++.+++
T Consensus       349 ~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g  394 (719)
T 1z68_A          349 AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY  394 (719)
T ss_dssp             CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred             eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence            5544332222223332 56788887653      346777776533

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=97.19  E-value=0.057  Score=42.81  Aligned_cols=192  Identities=9%  Similarity=-0.010  Sum_probs=109.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .+++|++....|. +-..++ .|...++++....  ..+ ......+..+++.+.++.|. +-...+.|...+.+.....
T Consensus        20 ~~l~~sp~g~~la-s~~~D~-~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~-s~s~D~~v~iw~~~~~~~~   96 (345)
T 3fm0_A           20 WFLAWNPAGTLLA-SCGGDR-RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA-SASFDATTCIWKKNQDDFE   96 (345)
T ss_dssp             EEEEECTTSSCEE-EEETTS-CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEE-EEETTSCEEEEEECCC-EE
T ss_pred             EEEEECCCCCEEE-EEcCCC-eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEE-EEECCCcEEEEEccCCCeE
Confidence            4788998555554 444445 6888887765421  222 22345678899998666665 4445567777776654422


Q ss_pred             --EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcE-EE-EEcCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          80 --VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDRE-IF-LKAADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        80 --~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~-~~-~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                        ..+.........++++|.+..|..+..   .+.|...+++..... .+ ...........+++++.+..|..+ ...+
T Consensus        97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~  172 (345)
T 3fm0_A           97 CVTTLEGHENEVKSVAWAPSGNLLATCSR---DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA-SYDD  172 (345)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE-ETTS
T ss_pred             EEEEccCCCCCceEEEEeCCCCEEEEEEC---CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE-eCCC
Confidence              233345566789999985555554443   345777776654322 22 112213456789999986655544 4566


Q ss_pred             cEEEEecCCCceE---EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751         156 SLECMTIRNRVRR---KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       156 ~i~~~~~~g~~~~---~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~  201 (232)
                      .|...+.+.....   .+........++++. ++....+-...+.|...+
T Consensus       173 ~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~  222 (345)
T 3fm0_A          173 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR  222 (345)
T ss_dssp             CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEec
Confidence            6766666654322   222233445677874 444444544455555444

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=97.18  E-value=0.055  Score=42.43  Aligned_cols=193  Identities=8%  Similarity=-0.036  Sum_probs=110.7

Q ss_pred             EEEEEeCCC--CEEEEEEcCCCCcEEEEEcCCCc-eeEEEeCCCCCccEEEE------eecCCeEEEEeCCCCeEEEEeC
Q psy5751           3 IGITVDCVE--GQVYYSSVADKSSIKRAHLDGKN-VEDVITTNIRSPEGLTF------DWVNRVLYWTDSQMDTISMANL   73 (232)
Q Consensus         3 ~~i~~d~~~--~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~~~~~p~gl~~------d~~~~~ly~~d~~~~~I~~~~~   73 (232)
                      .+++|.+..  +.++++-..++ .|...++.... ....+......+..++.      .+.++.|+ +-...+.|...++
T Consensus        69 ~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~-~~~~d~~i~vwd~  146 (357)
T 3i2n_A           69 KCGTFGATSLQQRYLATGDFGG-NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIV-TGSRDGTVKVWDP  146 (357)
T ss_dssp             EEEECTTCCTTTCCEEEEETTS-CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEE-EEETTSCEEEECT
T ss_pred             EEEEEcCCCCCCceEEEecCCC-eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEE-EEeCCCeEEEEeC
Confidence            467787753  34444444445 78888888654 33344333455666643      34344454 5555678999998


Q ss_pred             CCCC-CEEEEeCC----CCCceEEE----EeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC--
Q psy5751          74 NDDQ-PKVIVSKD----LVNPRGIV----VHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF--  142 (232)
Q Consensus        74 ~g~~-~~~~~~~~----~~~p~~ia----vd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~--  142 (232)
                      .... ....+...    ......++    +++....|+.+..   .+.|...++...........  ......+++++  
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~  221 (357)
T 3i2n_A          147 RQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD---NGDIKLFDLRNMALRWETNI--KNGVCSLEFDRKD  221 (357)
T ss_dssp             TSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEESCSS
T ss_pred             CCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc---CCeEEEEECccCceeeecCC--CCceEEEEcCCCC
Confidence            7765 33333311    12445666    4554454544442   45788888887655433332  45678999998  


Q ss_pred             -CCCEEEEEECCCCcEEEEecCCCce-EEEe-----cCCCceEEEEEE-CCE-EEEEeCCCCcEEEEeCC
Q psy5751         143 -RTDELCWVDADSKSLECMTIRNRVR-RKVY-----SNCTYPFGLSIT-DEK-YYWTDWKTNRIESANKE  203 (232)
Q Consensus       143 -~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~-----~~~~~p~gla~~-~~~-ly~td~~~~~i~~~~~~  203 (232)
                       .++.|+.+ ...+.|...+++.... ..+.     ........+++. .+. ++++-...+.|...+..
T Consensus       222 ~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~  290 (357)
T 3i2n_A          222 ISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE  290 (357)
T ss_dssp             SSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred             CCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence             65666555 5567777777764321 1111     334445677775 344 66666666777776654

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=97.18  E-value=0.056  Score=44.63  Aligned_cols=223  Identities=6%  Similarity=-0.078  Sum_probs=124.7

Q ss_pred             eEEEEEeCCCCEEEE---EEcCCCCcEEEEEcCCC-----ce----eEE--EeCCCCCccEEEEeecCCeEEEEeCCCCe
Q psy5751           2 LIGITVDCVEGQVYY---SSVADKSSIKRAHLDGK-----NV----EDV--ITTNIRSPEGLTFDWVNRVLYWTDSQMDT   67 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~---~d~~~~~~i~~~~~~g~-----~~----~~~--~~~~~~~p~gl~~d~~~~~ly~~d~~~~~   67 (232)
                      +.+++|++.++.|++   +...++ .|..+++...     ..    ..+  ....-..+.++++.+..+.++.+-...+.
T Consensus        95 v~~l~~spdg~~lav~~~sgs~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~  173 (434)
T 2oit_A           95 IHHLALSCDNLTLSACMMSSEYGS-IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS  173 (434)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTEE-EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred             ccEEEEcCCCCEEEEEEeccCCCc-eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence            458899998777776   333344 7877776532     10    111  11123567889998865667777777789


Q ss_pred             EEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCC-----CcceEEEeC
Q psy5751          68 ISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK-----LPNSLAVDF  142 (232)
Q Consensus        68 I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~-----~p~~l~~d~  142 (232)
                      |...|+...............+..++.+|.+..|+....   .+.|...++.+.....+.......     ...+++.++
T Consensus       174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~  250 (434)
T 2oit_A          174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ---NGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG  250 (434)
T ss_dssp             EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET---TSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred             EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC---CCcEEEEccCCcccccccCCcccCCCCceeEEEEEEec
Confidence            999998766332222233457889999997666666553   456888888754333322111011     335667776


Q ss_pred             CCCEEEEEECCCC------cEEEEecCCCc---eEEEec--C------CCceEEE--E-E-ECCEEEEEeCCCCcEEEEe
Q psy5751         143 RTDELCWVDADSK------SLECMTIRNRV---RRKVYS--N------CTYPFGL--S-I-TDEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       143 ~~~~Ly~~d~~~~------~i~~~~~~g~~---~~~~~~--~------~~~p~gl--a-~-~~~~ly~td~~~~~i~~~~  201 (232)
                      ....+.......+      .+...++...+   ...+..  .      ...+..+  . + +-+.+|++.+.+..|..+.
T Consensus       251 ~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~  330 (434)
T 2oit_A          251 TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILA  330 (434)
T ss_dssp             TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEE
T ss_pred             CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEE
Confidence            5333322233322      25555665321   122211  1      2222222  2 2 3578999999999888888


Q ss_pred             CCCC--Ccc--------eEEecc---CCcceeEEEEEEcC
Q psy5751         202 KEGE--RAP--------SIALDM---MGTTYMYGIAAVPS  228 (232)
Q Consensus       202 ~~g~--~~~--------~i~~~~---~~~~~p~gi~~~~~  228 (232)
                      ..++  ..+        ...+|.   ..-+.|.|+++...
T Consensus       331 ~~~~~~~~~~~~~~d~~ra~lP~~~~~~dt~piG~~~d~~  370 (434)
T 2oit_A          331 RQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYT  370 (434)
T ss_dssp             ECTTSSCEEEEEECGGGCCBCCBCTTSCBCCEEEEEEECC
T ss_pred             ecCCCCccEEEeccccccccccCCCCCCCceeeEEEEEcc
Confidence            7643  221        112221   12456889888653

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=97.14  E-value=0.054  Score=41.58  Aligned_cols=208  Identities=13%  Similarity=0.114  Sum_probs=118.9

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC---CE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ---PK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~   79 (232)
                      .+++| +.++.|+.+. .++ .|...+++.......+......+..+++.+.++.|+.+. ..+.|...++....   ..
T Consensus        22 ~~~~~-~~~~~l~s~~-~dg-~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~   97 (313)
T 3odt_A           22 RDVVA-VDDSKVASVS-RDG-TVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-KDTMINGVPLFATSGEDPL   97 (313)
T ss_dssp             EEEEE-EETTEEEEEE-TTS-EEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTCCTTSCC-
T ss_pred             EEEEe-cCCCEEEEEE-cCC-cEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-CCCeEEEEEeeecCCCCcc
Confidence            46777 5556655544 445 788888876654444444457889999999776666554 55788888765542   22


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC-CCCEEEEEECCCCcEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF-RTDELCWVDADSKSLE  158 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~-~~~~Ly~~d~~~~~i~  158 (232)
                      ..+.........++.+  .+.|+.+..   .+.|...+ .+..... .... ......+++.+ .+..| ++-...+.|.
T Consensus        98 ~~~~~~~~~i~~~~~~--~~~l~~~~~---d~~i~~~d-~~~~~~~-~~~~-~~~v~~~~~~~~~~~~l-~~~~~d~~i~  168 (313)
T 3odt_A           98 YTLIGHQGNVCSLSFQ--DGVVISGSW---DKTAKVWK-EGSLVYN-LQAH-NASVWDAKVVSFSENKF-LTASADKTIK  168 (313)
T ss_dssp             CEECCCSSCEEEEEEE--TTEEEEEET---TSEEEEEE-TTEEEEE-EECC-SSCEEEEEEEETTTTEE-EEEETTSCEE
T ss_pred             cchhhcccCEEEEEec--CCEEEEEeC---CCCEEEEc-CCcEEEe-cccC-CCceeEEEEccCCCCEE-EEEECCCCEE
Confidence            2333344566777775  566665553   34577776 2222222 2221 44566788877 44454 4445567777


Q ss_pred             EEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751         159 CMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       159 ~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ..+.. .....+.. .......+++. ++. +++-...+.|...+.. ++....+.   ........+++.++
T Consensus       169 i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~  236 (313)
T 3odt_A          169 LWQND-KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE---GHESFVYCIKLLPN  236 (313)
T ss_dssp             EEETT-EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTT
T ss_pred             EEecC-ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh---cCCceEEEEEEecC
Confidence            77722 22233322 34445677774 666 5555566788888876 33333332   23334555655443

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=97.14  E-value=0.14  Score=46.41  Aligned_cols=192  Identities=10%  Similarity=-0.021  Sum_probs=120.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +.+++|++....|..+. .++ .|..++..+...... ...-..+..+++.+ ++.|. +-...+.|...++........
T Consensus        20 V~~lafspdg~~lAsgs-~Dg-~I~lw~~~~~~~~~~-~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~~~~~~   94 (902)
T 2oaj_A           20 PIAAAFDFTQNLLAIAT-VTG-EVHIYGQQQVEVVIK-LEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQKVLTT   94 (902)
T ss_dssp             EEEEEEETTTTEEEEEE-TTS-EEEEECSTTCEEEEE-CSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTCSEEEE
T ss_pred             cEEEEECCCCCEEEEEe-CCC-EEEEEeCCCcEEEEE-cCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCCcEEEE
Confidence            45899999666665544 445 788888776443222 22334678899998 66455 444568899999987654333


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEE----------cCCCCCcceEEEeCCCCEEEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLK----------AADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~----------~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      +. .-.....++++|....|+....   .+.|...++++........          .........+++++.++.+..+-
T Consensus        95 ~~-~~~~V~~v~~sp~g~~l~sgs~---dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g  170 (902)
T 2oaj_A           95 VF-VPGKITSIDTDASLDWMLIGLQ---NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS  170 (902)
T ss_dssp             EE-CSSCEEEEECCTTCSEEEEEET---TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred             Ec-CCCCEEEEEECCCCCEEEEEcC---CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence            33 3346789999997777777664   4568888887664321111          11134567999999755555565


Q ss_pred             CCCCcEEEEecCCCceEEEecC-------------------CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         152 ADSKSLECMTIRNRVRRKVYSN-------------------CTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       152 ~~~~~i~~~~~~g~~~~~~~~~-------------------~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ...+.| ..+++..........                   .....++++. ++..+.+-...+.|...+..
T Consensus       171 ~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~  241 (902)
T 2oaj_A          171 YEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN  241 (902)
T ss_dssp             CSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred             eCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence            667788 888886644322221                   1235677774 45555665556777777765

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=97.14  E-value=0.08  Score=43.49  Aligned_cols=173  Identities=9%  Similarity=-0.001  Sum_probs=110.5

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCce
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPR   90 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~   90 (232)
                      .+.|+.+. .++ .|...++........+......+..+++++.++.|+ +-...+.|...++........+........
T Consensus       280 ~~~l~~~~-~d~-~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~  356 (464)
T 3v7d_B          280 GNIVVSGS-YDN-TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI-SASMDTTIRIWDLENGELMYTLQGHTALVG  356 (464)
T ss_dssp             TTEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred             CCEEEEEe-CCC-eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCcEEEEEeCCCCcEE
Confidence            45555444 344 688888876554344444456788999998666665 555667899999876554444444555667


Q ss_pred             EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEE-
Q psy5751          91 GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRK-  169 (232)
Q Consensus        91 ~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~-  169 (232)
                      .++++  .+.|+.+..   .+.|...++...........  ......+++++++..|..+.  .+.|...++..++... 
T Consensus       357 ~~~~~--~~~l~s~s~---dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~~~~~  427 (464)
T 3v7d_B          357 LLRLS--DKFLVSAAA---DGSIRGWDANDYSRKFSYHH--TNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGKLVHA  427 (464)
T ss_dssp             EEEEC--SSEEEEEET---TSEEEEEETTTCCEEEEEEC--TTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCCEEES
T ss_pred             EEEEc--CCEEEEEeC---CCcEEEEECCCCceeeeecC--CCCccEEEEEeCCCEEEEec--CCeEEEEECCCCcEEeh
Confidence            77777  456655553   45688888886654444433  44566778888866665554  6788888887654322 


Q ss_pred             E-ecCCCceEEEEEECCEEEEEeCCCC
Q psy5751         170 V-YSNCTYPFGLSITDEKYYWTDWKTN  195 (232)
Q Consensus       170 ~-~~~~~~p~gla~~~~~ly~td~~~~  195 (232)
                      . .........+++.++.++.+-...+
T Consensus       428 ~~~~~~~~v~~v~~~~~~l~~~~~~~g  454 (464)
T 3v7d_B          428 NILKDADQIWSVNFKGKTLVAAVEKDG  454 (464)
T ss_dssp             CTTTTCSEEEEEEEETTEEEEEEEETT
T ss_pred             hhccCCCcEEEEEecCCEEEEEEEeCC
Confidence            1 2234445677888888877755444

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=97.09  E-value=0.0058  Score=52.55  Aligned_cols=111  Identities=11%  Similarity=0.057  Sum_probs=76.9

Q ss_pred             CCCCccEEEEeecCCeEEEEeCC---------------------CCeEEEEeCCCCCC-------EEEEe----------
Q psy5751          42 NIRSPEGLTFDWVNRVLYWTDSQ---------------------MDTISMANLNDDQP-------KVIVS----------   83 (232)
Q Consensus        42 ~~~~p~gl~~d~~~~~ly~~d~~---------------------~~~I~~~~~~g~~~-------~~~~~----------   83 (232)
                      .+..|+++++++.++.+|++-+.                     .+.|+++..++...       ..++.          
T Consensus       382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~  461 (592)
T 3zwu_A          382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT  461 (592)
T ss_dssp             CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred             EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence            46789999999989999999654                     25799887654321       11111          


Q ss_pred             -----------CCCCCceEEEEeCCCCeEEEEEcCC----------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeC
Q psy5751          84 -----------KDLVNPRGIVVHPYYRKLFWSDWNR----------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        84 -----------~~~~~p~~iavd~~~~~ly~~d~~~----------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~  142 (232)
                                 ..++.|..|++++ .|.||++.-+.          .+..++...........++....-....|+++++
T Consensus       462 ~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp  540 (592)
T 3zwu_A          462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP  540 (592)
T ss_dssp             GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred             ccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence                       1367899999998 67788765331          2346677776656666665554345677999999


Q ss_pred             CCCEEEEEECC
Q psy5751         143 RTDELCWVDAD  153 (232)
Q Consensus       143 ~~~~Ly~~d~~  153 (232)
                      +.+.||+.-.+
T Consensus       541 Dg~tlfvniQH  551 (592)
T 3zwu_A          541 DQKTLFVGIQH  551 (592)
T ss_dssp             TSSEEEEEEES
T ss_pred             CCCEEEEEEEC
Confidence            99999988544

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=97.05  E-value=0.079  Score=41.85  Aligned_cols=196  Identities=13%  Similarity=0.037  Sum_probs=115.0

Q ss_pred             EEEEE-----eCCCCEEEEEEcCCCCcEEEEEcCCCc-------eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEE
Q psy5751           3 IGITV-----DCVEGQVYYSSVADKSSIKRAHLDGKN-------VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISM   70 (232)
Q Consensus         3 ~~i~~-----d~~~~~ly~~d~~~~~~i~~~~~~g~~-------~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~   70 (232)
                      .+++|     .+.++.++++-..++ .|...++....       ....+......+..+++.+.+..| ++-...+.|..
T Consensus        25 ~~~~~~~s~~~~~d~~~l~sgs~D~-~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~l  102 (343)
T 2xzm_R           25 TSIVAGFSQKENEDSPVLISGSRDK-TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA-ISSSWDKTLRL  102 (343)
T ss_dssp             EEEEECCCSSTTCCCCEEEEEETTS-CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE-EEEETTSEEEE
T ss_pred             hheeeEEEeecCCCCCEEEEEcCCC-EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE-EEEcCCCcEEE
Confidence            35666     443555555555555 67777765321       112233334567889998855554 46666788999


Q ss_pred             EeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCcceEEEeCCCC----
Q psy5751          71 ANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLPNSLAVDFRTD----  145 (232)
Q Consensus        71 ~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p~~l~~d~~~~----  145 (232)
                      .++........+.........++++|.+..|..+..   .+.|...++.+......... ........+++++...    
T Consensus       103 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  179 (343)
T 2xzm_R          103 WDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA---EREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANK  179 (343)
T ss_dssp             EETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET---TSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSC
T ss_pred             EECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC---CCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccc
Confidence            998766554444456667889999996666655543   34577777764322221110 1123346777777531    


Q ss_pred             -----EEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         146 -----ELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       146 -----~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                           .++.+-...+.|...+.++.....+.........+++. ++.+..+-...+.|...+..
T Consensus       180 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~  243 (343)
T 2xzm_R          180 VQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL  243 (343)
T ss_dssp             CCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred             cCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence                 34445455677777775544333333344445677774 55555665566777777763

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=97.01  E-value=0.092  Score=42.06  Aligned_cols=196  Identities=10%  Similarity=0.036  Sum_probs=113.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-EE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-VI   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~   81 (232)
                      ..++|.+....|..+.......|...++........+.. -..+.+|++.+.++.|..+ .. +.+.+.+....... ..
T Consensus       137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~-~~~V~~v~fspdg~~l~s~-s~-~~~~~~~~~~~~~~~~~  213 (365)
T 4h5i_A          137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET-RGEVKDLHFSTDGKVVAYI-TG-SSLEVISTVTGSCIARK  213 (365)
T ss_dssp             EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSSEEEEE-CS-SCEEEEETTTCCEEEEE
T ss_pred             EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC-CCceEEEEEccCCceEEec-cc-eeEEEEEeccCcceeee
Confidence            367888877777766543322788889886554333333 3578999999866665544 33 34555554433322 22


Q ss_pred             Ee-CCCCCceEEEEeCCCCeEEEEEcCCC-CCcEEEEeCCCCCcEEEE---EcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          82 VS-KDLVNPRGIVVHPYYRKLFWSDWNRS-GPKIEWSNLDGTDREIFL---KAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        82 ~~-~~~~~p~~iavd~~~~~ly~~d~~~~-~~~I~~~~~~g~~~~~~~---~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      .. ........+++.|.+..+..+..... ...+...++.........   ..........+++++++..|..+ ...+.
T Consensus       214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg-s~D~~  292 (365)
T 4h5i_A          214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA-SNDNS  292 (365)
T ss_dssp             CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE-ETTSC
T ss_pred             ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE-cCCCE
Confidence            11 23334578889985555544433221 123444554433322211   11114456789999986555444 55678


Q ss_pred             EEEEecCCCce-EEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         157 LECMTIRNRVR-RKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       157 i~~~~~~g~~~-~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      |...+....+. ..+.. ......+|++. ++.+..+-...+.|...+.
T Consensus       293 V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i  341 (365)
T 4h5i_A          293 IALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL  341 (365)
T ss_dssp             EEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred             EEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence            88888876544 33433 34446788884 6666777666777777764

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=96.99  E-value=0.15  Score=43.94  Aligned_cols=194  Identities=12%  Similarity=0.025  Sum_probs=108.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCC--CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADK--SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~--~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++|++..+.|..+.....  ..|+..+. +... ..+......+..+++.+.+..++.+-...+.|...+........
T Consensus       107 ~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~-~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~  184 (611)
T 1nr0_A          107 KDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSN-GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS  184 (611)
T ss_dssp             EEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBC-BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE
T ss_pred             EEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCc-ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee
Confidence            46778886666665554332  13443332 2221 11222335678889988666556676677888888876544444


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc------CCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA------ADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~------~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      .+..+......++++|. +.++.+-..  .+.|...++........+..      .......++++++++..|. +-...
T Consensus       185 ~l~~H~~~V~~v~fspd-g~~las~s~--D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~D  260 (611)
T 1nr0_A          185 TFGEHTKFVHSVRYNPD-GSLFASTGG--DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASAD  260 (611)
T ss_dssp             EECCCSSCEEEEEECTT-SSEEEEEET--TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEETT
T ss_pred             eeccccCceEEEEECCC-CCEEEEEEC--CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeCC
Confidence            44455667889999985 544444332  35677777654443333211      1134567999999866554 44567


Q ss_pred             CcEEEEecCCCce-EEEecC---CCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         155 KSLECMTIRNRVR-RKVYSN---CTYPFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       155 ~~i~~~~~~g~~~-~~~~~~---~~~p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      +.|...+++..+. ..+...   .....++.+... ..++-...+.+...+..
T Consensus       261 ~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~i~~~~~~  312 (611)
T 1nr0_A          261 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ-ALVSISANGFINFVNPE  312 (611)
T ss_dssp             SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS-CEEEEETTCCEEEEETT
T ss_pred             CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC-EEEEEeCCCcEEEEeCC
Confidence            7888888875543 222211   112334444333 33443445556666554

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=96.98  E-value=0.059  Score=47.60  Aligned_cols=138  Identities=10%  Similarity=-0.025  Sum_probs=87.3

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC-C----CccEEEEeecCCeEEEEeCC--------CCeEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI-R----SPEGLTFDWVNRVLYWTDSQ--------MDTISM   70 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~-~----~p~gl~~d~~~~~ly~~d~~--------~~~I~~   70 (232)
                      ++.|.+. +.+++++  ++ .|...++.+.....++.... .    ...++++.+.++.|.++...        .+.++.
T Consensus        21 ~~~w~~d-g~~~~~~--~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~   96 (740)
T 4a5s_A           21 SLRWISD-HEYLYKQ--EN-NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI   96 (740)
T ss_dssp             CEEECSS-SEEEEEE--TT-EEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred             ccEECCC-CcEEEEc--CC-cEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence            5677774 4555555  55 89999998776555554321 1    22447888888887776532        156788


Q ss_pred             EeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-----------------CC
Q psy5751          71 ANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-----------------LK  133 (232)
Q Consensus        71 ~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-----------------~~  133 (232)
                      .++.+.....+. .........+.+|.++.|.++.    ...|+..++++.....+.....                 +.
T Consensus        97 ~d~~~~~~~~l~-~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~  171 (740)
T 4a5s_A           97 YDLNKRQLITEE-RIPNNTQWVTWSPVGHKLAYVW----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS  171 (740)
T ss_dssp             EETTTTEECCSS-CCCTTEEEEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred             EECCCCcEEEcc-cCCCcceeeEECCCCCEEEEEE----CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence            898876543332 2233457888999888787775    2458888887766544322110                 12


Q ss_pred             CcceEEEeCCCCEEEEE
Q psy5751         134 LPNSLAVDFRTDELCWV  150 (232)
Q Consensus       134 ~p~~l~~d~~~~~Ly~~  150 (232)
                      ...+++++|++.+|.++
T Consensus       172 ~~~~~~wSpDg~~la~~  188 (740)
T 4a5s_A          172 AYSALWWSPNGTFLAYA  188 (740)
T ss_dssp             SSBCEEECTTSSEEEEE
T ss_pred             CCcceEECCCCCEEEEE
Confidence            22458899998888776

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=96.94  E-value=0.096  Score=41.07  Aligned_cols=155  Identities=8%  Similarity=-0.088  Sum_probs=97.7

Q ss_pred             CCCCccEEEEeecC--CeEEEEeCCCCeEEEEeCCCCC--CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751          42 NIRSPEGLTFDWVN--RVLYWTDSQMDTISMANLNDDQ--PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN  117 (232)
Q Consensus        42 ~~~~p~gl~~d~~~--~~ly~~d~~~~~I~~~~~~g~~--~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~  117 (232)
                      .-..+..+++.+..  +.+.++-...+.|...+++...  ....+.........++++|....|+.+..   .+.|...+
T Consensus        38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd  114 (368)
T 3mmy_A           38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC---DKTAKMWD  114 (368)
T ss_dssp             CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEE
T ss_pred             CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC---CCcEEEEE
Confidence            34678889999864  4555566667889999987532  22344445667889999986566665553   45688888


Q ss_pred             CCCCCcEEEEEcCCCCCcceEEE--eCCCCEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCC
Q psy5751         118 LDGTDREIFLKAADLKLPNSLAV--DFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTN  195 (232)
Q Consensus       118 ~~g~~~~~~~~~~~~~~p~~l~~--d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~  195 (232)
                      ++..........  .....++++  ++. +.++++-...+.|...+++..+.............+......++.+... +
T Consensus       115 ~~~~~~~~~~~~--~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  190 (368)
T 3mmy_A          115 LSSNQAIQIAQH--DAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAE-R  190 (368)
T ss_dssp             TTTTEEEEEEEC--SSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGG-G
T ss_pred             cCCCCceeeccc--cCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCC-C
Confidence            886654444332  456788998  665 5555555667888888887655433333333444555556665555443 4


Q ss_pred             cEEEEeCC
Q psy5751         196 RIESANKE  203 (232)
Q Consensus       196 ~i~~~~~~  203 (232)
                      .+...+..
T Consensus       191 ~i~~~~~~  198 (368)
T 3mmy_A          191 GLIVYQLE  198 (368)
T ss_dssp             CEEEEECS
T ss_pred             cEEEEEec
Confidence            45555554

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=96.86  E-value=0.0068  Score=53.18  Aligned_cols=137  Identities=11%  Similarity=0.018  Sum_probs=90.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCC---CCccEEEEeecCCeEEEEeCC--------CCeEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNI---RSPEGLTFDWVNRVLYWTDSQ--------MDTISMAN   72 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~---~~p~gl~~d~~~~~ly~~d~~--------~~~I~~~~   72 (232)
                      ++.|.+.. .+.++. .++ .|+.+++++.....++....   .....+++.+.++.|.++...        .+.|++.+
T Consensus        20 ~~~~s~dg-~~~~~~-~d~-~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           20 FPNWISGQ-EYLHQS-ADN-NIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             CCEESSSS-EEEEEC-TTS-CEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             ccEECCCC-eEEEEc-CCC-CEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            45677744 544443 455 89999999877655554221   137789999988888776541        36899999


Q ss_pred             CCCCCC---EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-----------------C
Q psy5751          73 LNDDQP---KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-----------------L  132 (232)
Q Consensus        73 ~~g~~~---~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-----------------~  132 (232)
                      +++...   ..+    ......++++|.++.|.++.    ...|+..++++.....+.....                 +
T Consensus        97 ~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~----~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~  168 (719)
T 1z68_A           97 LSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVY----QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEML  168 (719)
T ss_dssp             TTTTEECCSSCC----CSSBCCEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTT
T ss_pred             CCCCccccceec----CcccccceECCCCCEEEEEE----CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecc
Confidence            887643   222    13467789999887887775    2469999887765544332110                 0


Q ss_pred             CCcceEEEeCCCCEEEEEE
Q psy5751         133 KLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus       133 ~~p~~l~~d~~~~~Ly~~d  151 (232)
                      ....++++++++.+|+++.
T Consensus       169 ~~~~~~~wSPDG~~la~~~  187 (719)
T 1z68_A          169 ATKYALWWSPNGKFLAYAE  187 (719)
T ss_dssp             CSSCCEEECTTSSEEEEEE
T ss_pred             cCcccEEECCCCCEEEEEE
Confidence            1225899999988888764

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=96.75  E-value=0.13  Score=39.90  Aligned_cols=197  Identities=9%  Similarity=0.012  Sum_probs=118.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-----eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-----EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-----~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      ..+++|++..+.++++--.++ .|...++.....     ...+......+..+++.+.++.|+ +-...+.|...+....
T Consensus        41 V~~v~~sp~~~~~l~S~s~D~-~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~-s~~~d~~i~~~~~~~~  118 (340)
T 4aow_A           41 VTQIATTPQFPDMILSASRDK-TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTG  118 (340)
T ss_dssp             EEEEEECTTCTTEEEEEETTS-CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTT
T ss_pred             EEEEEEeCCCCCEEEEEcCCC-eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE-EEcccccceEEeeccc
Confidence            357899987666666655556 788877764321     122333346788899998666665 4445578888888776


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC-CEEEEEECCCC
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT-DELCWVDADSK  155 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~-~~Ly~~d~~~~  155 (232)
                      ...................+....|+....   .+.+...+..+.................+++.+.. ..++++-...+
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~---d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~  195 (340)
T 4aow_A          119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSR---DKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK  195 (340)
T ss_dssp             EEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred             ceeeeecCCCCceeEEEEeecCccceeecC---CCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC
Confidence            655555555556667777775565555543   34466666665544333322213345667777654 34555555667


Q ss_pred             cEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         156 SLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      .|...++.......... ......++++. ++.++++-...+.|...+..
T Consensus       196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~  245 (340)
T 4aow_A          196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN  245 (340)
T ss_dssp             CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred             EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec
Confidence            78888887665433333 33344677774 45555555556677766665

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=96.73  E-value=0.18  Score=41.19  Aligned_cols=190  Identities=8%  Similarity=0.069  Sum_probs=108.8

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      +++++  .+.|+.+. .++ .|...+++.......+......+..++++  ++.|+ +-...+.|...++........+.
T Consensus       164 ~~~~~--~~~l~s~~-~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~-s~s~dg~i~~wd~~~~~~~~~~~  236 (445)
T 2ovr_B          164 SSQMR--DNIIISGS-TDR-TLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVV-SGSRDATLRVWDIETGQCLHVLM  236 (445)
T ss_dssp             EEEEE--TTEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEE-EEETTSEEEEEESSSCCEEEEEE
T ss_pred             EEEec--CCEEEEEe-CCC-eEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEE-EEeCCCEEEEEECCCCcEEEEEc
Confidence            45555  34444333 444 68888887554433333334456667665  45554 55556889999988766555555


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      ........++.+  ++.|+.+..   .+.|...++........+... ......+++  ++..|+.+ ...+.|...+++
T Consensus       237 ~~~~~v~~~~~~--~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~  307 (445)
T 2ovr_B          237 GHVAAVRCVQYD--GRRVVSGAY---DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSG-SLDTSIRVWDVE  307 (445)
T ss_dssp             CCSSCEEEEEEC--SSCEEEEET---TSCEEEEEGGGTEEEEEECCC-SSCEEEEEE--CSSEEEEE-ETTSCEEEEETT
T ss_pred             CCcccEEEEEEC--CCEEEEEcC---CCEEEEEECCCCcEeEEecCC-CCceEEEEE--CCCEEEEE-eCCCeEEEEECC
Confidence            455566677774  556655553   355777777654332222221 334456666  33455444 557788888887


Q ss_pred             CCceEE-EecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751         164 NRVRRK-VYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSI  210 (232)
Q Consensus       164 g~~~~~-~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i  210 (232)
                      ...... +.........+++.++.++... ..+.|...+.. +.....+
T Consensus       308 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~  355 (445)
T 2ovr_B          308 TGNCIHTLTGHQSLTSGMELKDNILVSGN-ADSTVKIWDIKTGQCLQTL  355 (445)
T ss_dssp             TCCEEEEECCCCSCEEEEEEETTEEEEEE-TTSCEEEEETTTCCEEEEE
T ss_pred             CCCEEEEEcCCcccEEEEEEeCCEEEEEe-CCCeEEEEECCCCcEEEEE
Confidence            655433 3233344556677766655544 45778888875 4433333

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=96.72  E-value=0.29  Score=43.44  Aligned_cols=191  Identities=12%  Similarity=0.112  Sum_probs=114.4

Q ss_pred             CCCEEEEEEcCCC---CcEEEEEc---CCC--ceeEEEeCC-------CCCccEEEEe-ecCCeEEEEeCCCC----eEE
Q psy5751          10 VEGQVYYSSVADK---SSIKRAHL---DGK--NVEDVITTN-------IRSPEGLTFD-WVNRVLYWTDSQMD----TIS   69 (232)
Q Consensus        10 ~~~~ly~~d~~~~---~~i~~~~~---~g~--~~~~~~~~~-------~~~p~gl~~d-~~~~~ly~~d~~~~----~I~   69 (232)
                      .++++||+....+   +.+++...   +|.  ..+.++..+       .....+.++. +.++.|.|+....+    .|+
T Consensus       125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~  204 (751)
T 2xe4_A          125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIE  204 (751)
T ss_dssp             ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEE
T ss_pred             ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEE
Confidence            3678888864433   35778876   554  444444321       1134567888 87877776654432    499


Q ss_pred             EEeCCCC-CC--EEEEeCCCCCceEEEEeCCCCeEEEEEcCCC--CCcEEEEeCCCCCc--EEEEEcCCCCCcceEEEeC
Q psy5751          70 MANLNDD-QP--KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS--GPKIEWSNLDGTDR--EIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        70 ~~~~~g~-~~--~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~--~~~I~~~~~~g~~~--~~~~~~~~~~~p~~l~~d~  142 (232)
                      +.++++. ..  ..+-.    ...+++..|.++.||++.....  ..+|++.++.+...  ..+.....-..-.++.+++
T Consensus       205 v~dl~~g~~~l~~~~~~----~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp  280 (751)
T 2xe4_A          205 FKRISDPSQTIADKVSG----TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA  280 (751)
T ss_dssp             EEETTCTTCCCCCCEEE----ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred             EEECCCCCEeCCccccC----ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence            9999887 41  11111    1235778887778888765321  24799999987642  3343332122345778999


Q ss_pred             CCCEEEEEECC--CCcEEEEecCCC--ce--EEEecCCCce-EEEEE-ECCEEEEE-eC---CCCcEEEEeCCC
Q psy5751         143 RTDELCWVDAD--SKSLECMTIRNR--VR--RKVYSNCTYP-FGLSI-TDEKYYWT-DW---KTNRIESANKEG  204 (232)
Q Consensus       143 ~~~~Ly~~d~~--~~~i~~~~~~g~--~~--~~~~~~~~~p-~gla~-~~~~ly~t-d~---~~~~i~~~~~~g  204 (232)
                      ++.+|+++...  ...|+.+++++.  ..  +.+......+ ..+.+ .++.||+. +.   .+.+|++++..+
T Consensus       281 Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          281 DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            98888887533  457999999865  23  3343332222 44552 37777766 33   345888888764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=96.70  E-value=0.16  Score=40.05  Aligned_cols=155  Identities=8%  Similarity=-0.042  Sum_probs=93.5

Q ss_pred             EEEEEeC--CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           3 IGITVDC--VEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~--~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .++++++  .++.|..+. .++ .|...++.......+... ....+..+++.+.+ .++.+-...+.|...|+......
T Consensus       129 ~~~~~~~~~~~~~l~s~s-~dg-~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~  205 (343)
T 3lrv_A          129 IYMYGHNEVNTEYFIWAD-NRG-TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQA  205 (343)
T ss_dssp             EEEECCC---CCEEEEEE-TTC-CEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSC
T ss_pred             EEEEcCCCCCCCEEEEEe-CCC-cEEEEECCCCcEEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCC
Confidence            4677777  555554444 445 788889886554333322 22357889999854 45556667789999998876654


Q ss_pred             -EEEeC-CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-CCCCCc---ceEEEeCCCCEEEEEECC
Q psy5751          80 -VIVSK-DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-ADLKLP---NSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        80 -~~~~~-~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-~~~~~p---~~l~~d~~~~~Ly~~d~~  153 (232)
                       ..+.. +......++++|.+..|..+. .  . .|...++........+.. ..-..+   ..+++++++..|..+...
T Consensus       206 ~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~--~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~  281 (343)
T 3lrv_A          206 SSRFPVDEEAKIKEVKFADNGYWMVVEC-D--Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNE  281 (343)
T ss_dssp             CEECCCCTTSCEEEEEECTTSSEEEEEE-S--S-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETT
T ss_pred             ccEEeccCCCCEEEEEEeCCCCEEEEEe-C--C-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCC
Confidence             34443 456778999998555555544 2  2 688888765532211110 000012   359999987777765554


Q ss_pred             CCcEEEEecCC
Q psy5751         154 SKSLECMTIRN  164 (232)
Q Consensus       154 ~~~i~~~~~~g  164 (232)
                      .+.|...+++.
T Consensus       282 d~~i~v~~~~~  292 (343)
T 3lrv_A          282 SNSLTIYKFDK  292 (343)
T ss_dssp             TTEEEEEEECT
T ss_pred             CCcEEEEEEcc
Confidence            66666666653

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=96.61  E-value=0.12  Score=41.33  Aligned_cols=154  Identities=9%  Similarity=0.030  Sum_probs=84.9

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-eeEEEe-CCCCCccEEEEeecCCeEEEEeCCC-C--eEEEEeCCCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQM-D--TISMANLNDDQ   77 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~-~--~I~~~~~~g~~   77 (232)
                      .+++|.+....|..+.  .+ .+.++...... ...... ..-..+..+++.+.++.+..+.... .  .+...+.....
T Consensus       180 ~~v~fspdg~~l~s~s--~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~  256 (365)
T 4h5i_A          180 KDLHFSTDGKVVAYIT--GS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGN  256 (365)
T ss_dssp             CEEEECTTSSEEEEEC--SS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred             EEEEEccCCceEEecc--ce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence            4688888666555443  33 56666655333 211111 1223467788888666665544332 2  34455544433


Q ss_pred             CEE----EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          78 PKV----IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        78 ~~~----~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ...    .+.........++++|.+..|.....   .+.|...++........+....-....+++|+|++.+| .+-+.
T Consensus       257 ~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~---D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~l-aS~S~  332 (365)
T 4h5i_A          257 TSVLRSKQVTNRFKGITSMDVDMKGELAVLASN---DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYV-ASVSA  332 (365)
T ss_dssp             EEEEEEEEEESSCSCEEEEEECTTSCEEEEEET---TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEE-EEEET
T ss_pred             ecceeeeeecCCCCCeEeEEECCCCCceEEEcC---CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEE-EEEeC
Confidence            211    22245556789999995555544443   35688888765432222222223457899999985555 55566


Q ss_pred             CCcEEEEecC
Q psy5751         154 SKSLECMTIR  163 (232)
Q Consensus       154 ~~~i~~~~~~  163 (232)
                      .+.|...++.
T Consensus       333 D~tvrvw~ip  342 (365)
T 4h5i_A          333 ANTIHIIKLP  342 (365)
T ss_dssp             TSEEEEEECC
T ss_pred             CCeEEEEEcC
Confidence            6766666664

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=96.52  E-value=0.18  Score=38.54  Aligned_cols=208  Identities=10%  Similarity=0.042  Sum_probs=116.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc---eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN---VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~---~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ..+++|++..+.|+.+... + .|...++....   ....+......+..++++  ++.|+ +-...+.|...+ .+. .
T Consensus        62 v~~~~~~~~~~~l~~~~~d-g-~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~-~~~~d~~i~~~d-~~~-~  134 (313)
T 3odt_A           62 LNSVCYDSEKELLLFGGKD-T-MINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVI-SGSWDKTAKVWK-EGS-L  134 (313)
T ss_dssp             EEEEEEETTTTEEEEEETT-S-CEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEE-EEETTSEEEEEE-TTE-E
T ss_pred             EEEEEECCCCCEEEEecCC-C-eEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEE-EEeCCCCEEEEc-CCc-E
Confidence            3578899877766666543 4 57777776432   112222333556667774  55555 545567888888 222 2


Q ss_pred             EEEEeCCCCCceEEEEeC-CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          79 KVIVSKDLVNPRGIVVHP-YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        79 ~~~~~~~~~~p~~iavd~-~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                      ...+.........++..+ ..+.|+.+..   .+.|...+..  ................+++++. +. +++-...+.|
T Consensus       135 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i  207 (313)
T 3odt_A          135 VYNLQAHNASVWDAKVVSFSENKFLTASA---DKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDD-GH-FISCSNDGLI  207 (313)
T ss_dssp             EEEEECCSSCEEEEEEEETTTTEEEEEET---TSCEEEEETT--EEEEEECSSCSSCEEEEEEEET-TE-EEEEETTSEE
T ss_pred             EEecccCCCceeEEEEccCCCCEEEEEEC---CCCEEEEecC--ceEEEEeccCcccEEEEEEcCC-Ce-EEEccCCCeE
Confidence            233334555677888877 4455544443   3457777622  1222222212456778999987 45 4455667889


Q ss_pred             EEEecCCCceE-EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEc
Q psy5751         158 ECMTIRNRVRR-KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       158 ~~~~~~g~~~~-~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      ...+++..+.. .+.........+++. ++. +++-...+.|...+.. +.....+..   .......+++.+
T Consensus       208 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~  276 (313)
T 3odt_A          208 KLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITL---PAISIWSVDCMS  276 (313)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEEC---SSSCEEEEEECT
T ss_pred             EEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEec---cCceEEEEEEcc
Confidence            99998855443 333344556788885 444 4455556788888876 333333322   222445555443

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=96.37  E-value=0.067  Score=44.18  Aligned_cols=123  Identities=8%  Similarity=-0.085  Sum_probs=78.1

Q ss_pred             CCccEEEEeecCCeEEE---EeCCCCeEEEEeCCCC-----CC----EEEE--eCCCCCceEEEEeCCCCeEEEEEcCCC
Q psy5751          44 RSPEGLTFDWVNRVLYW---TDSQMDTISMANLNDD-----QP----KVIV--SKDLVNPRGIVVHPYYRKLFWSDWNRS  109 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~---~d~~~~~I~~~~~~g~-----~~----~~~~--~~~~~~p~~iavd~~~~~ly~~d~~~~  109 (232)
                      ..+..+++.+.++.|++   +....+.|...++...     ..    ..+.  ..+.....+++.+|..+.++.+-..  
T Consensus        93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~--  170 (434)
T 2oit_A           93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA--  170 (434)
T ss_dssp             SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET--
T ss_pred             CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC--
Confidence            35788999988887876   5555678888886542     11    1111  1234567899999865666665433  


Q ss_pred             CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751         110 GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus       110 ~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~  170 (232)
                      .+.|...++........... .-....++++++++..|+.+. ..+.|...++++.....+
T Consensus       171 Dg~v~iwD~~~~~~~~~~~~-~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~  229 (434)
T 2oit_A          171 DGSIAVLQVTETVKVCATLP-STVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVI  229 (434)
T ss_dssp             TSCEEEEEESSSEEEEEEEC-GGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEE
T ss_pred             CCeEEEEEcCCCcceeeccC-CCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccc
Confidence            45677777765522211111 134678999999977776664 577898988885544444

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=96.34  E-value=0.32  Score=39.47  Aligned_cols=197  Identities=11%  Similarity=-0.042  Sum_probs=111.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcC----CCceeEEE-------e--C--CCCCccEEEEee-cCCeEEEEeCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLD----GKNVEDVI-------T--T--NIRSPEGLTFDW-VNRVLYWTDSQM   65 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~----g~~~~~~~-------~--~--~~~~p~gl~~d~-~~~~ly~~d~~~   65 (232)
                      ..+++|.+..+.|+.+. .++ .|...+++    +.......       .  +  ....+..++.-+ ..+.++++-...
T Consensus       114 v~~~~~~~~~~~l~s~s-~dg-~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d  191 (437)
T 3gre_A          114 VTQITMIPNFDAFAVSS-KDG-QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL  191 (437)
T ss_dssp             EEEEEECTTSSEEEEEE-TTS-EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT
T ss_pred             EEEEEEeCCCCEEEEEe-CCC-EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC
Confidence            35788988666665554 344 67766663    32211110       0  0  111222333111 134455566667


Q ss_pred             CeEEEEeCCCCCCEEEEeC--CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC
Q psy5751          66 DTISMANLNDDQPKVIVSK--DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR  143 (232)
Q Consensus        66 ~~I~~~~~~g~~~~~~~~~--~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~  143 (232)
                      +.|...++........+..  .......++++|....|+.+..   .+.|...++........+..........+++.+.
T Consensus       192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~  268 (437)
T 3gre_A          192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT---RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF  268 (437)
T ss_dssp             SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET---TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred             CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC---CCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence            8999999987665555543  4567889999986555555553   3568888877543222222111223456655542


Q ss_pred             ---CCEEEEEECCCCcEEEEecCCCce-EEEecC--------------------------CCceEEEEEECCEEEEEeCC
Q psy5751         144 ---TDELCWVDADSKSLECMTIRNRVR-RKVYSN--------------------------CTYPFGLSITDEKYYWTDWK  193 (232)
Q Consensus       144 ---~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~--------------------------~~~p~gla~~~~~ly~td~~  193 (232)
                         ++.+.++-...+.|...+++.... ..+...                          ......+++.++.++++-..
T Consensus       269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~  348 (437)
T 3gre_A          269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEA  348 (437)
T ss_dssp             TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGG
T ss_pred             cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCC
Confidence               355666666677888888875543 222211                          01134567777777777777


Q ss_pred             CCcEEEEeCC
Q psy5751         194 TNRIESANKE  203 (232)
Q Consensus       194 ~~~i~~~~~~  203 (232)
                      .+.|...+..
T Consensus       349 d~~i~~wd~~  358 (437)
T 3gre_A          349 TSSIVMFSLN  358 (437)
T ss_dssp             GTEEEEEETT
T ss_pred             CCeEEEEECC
Confidence            7888888876

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=96.20  E-value=0.4  Score=39.22  Aligned_cols=192  Identities=9%  Similarity=0.012  Sum_probs=113.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEee-cCCeEEEEeCCCCeEEEEeCCCCCCEE-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDW-VNRVLYWTDSQMDTISMANLNDDQPKV-   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~-   80 (232)
                      .+++|.+ ++. +++-..++ .|...+++.......+......+..+++.+ ..+.+.++-...+.|...++....... 
T Consensus       166 ~~l~~~~-~~~-l~s~s~dg-~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~  242 (464)
T 3v7d_B          166 WALKYAH-GGI-LVSGSTDR-TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPD  242 (464)
T ss_dssp             EEEEECS-TTE-EEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC--
T ss_pred             EEEEEcC-CCE-EEEEeCCC-CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccc
Confidence            4677766 344 44444455 799999886554444444446777888875 244555566667889988887654221 


Q ss_pred             ----------------------EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceE
Q psy5751          81 ----------------------IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSL  138 (232)
Q Consensus        81 ----------------------~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l  138 (232)
                                            ...........+  .+....|+....   .+.|...++........+... ......+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~---d~~i~vwd~~~~~~~~~~~~~-~~~v~~~  316 (464)
T 3v7d_B          243 HGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY---DNTLIVWDVAQMKCLYILSGH-TDRIYST  316 (464)
T ss_dssp             ----CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET---TSCEEEEETTTTEEEEEECCC-SSCEEEE
T ss_pred             ccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC---CCeEEEEECCCCcEEEEecCC-CCCEEEE
Confidence                                  122222333343  443566665553   356888888754433333322 4567789


Q ss_pred             EEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCCCC
Q psy5751         139 AVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKEGE  205 (232)
Q Consensus       139 ~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~  205 (232)
                      ++++++..|+.+ ...+.|...+++.+....... .......+++.+..|+.+ ...+.|...+....
T Consensus       317 ~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~-s~dg~v~vwd~~~~  382 (464)
T 3v7d_B          317 IYDHERKRCISA-SMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSA-AADGSIRGWDANDY  382 (464)
T ss_dssp             EEETTTTEEEEE-ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEE-ETTSEEEEEETTTC
T ss_pred             EEcCCCCEEEEE-eCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEE-eCCCcEEEEECCCC
Confidence            999986666554 557788888887654433333 333445666665554444 44577777777643

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.07  E-value=0.3  Score=36.54  Aligned_cols=176  Identities=10%  Similarity=-0.083  Sum_probs=103.7

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCc------e-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC------
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKN------V-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ------   77 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~------~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~------   77 (232)
                      +-.||..+-.   +++........      + .++-..+......|++++ ++.||..  .++.+++.+.....      
T Consensus         4 ~~~l~~v~~d---~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~   77 (236)
T 1tl2_A            4 ESMLRGVYQD---KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMG   77 (236)
T ss_dssp             CCCEEEEETT---EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHH
T ss_pred             ceEEEEEeCC---cEEecCCCCCcccchhhhccccCccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccc
Confidence            3445555543   46665554322      1 223333466888999999 8889988  55789999874311      


Q ss_pred             -CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeC--CCCC-----cEEEEEcCCCCCcceEEEeCCCCEEEE
Q psy5751          78 -PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL--DGTD-----REIFLKAADLKLPNSLAVDFRTDELCW  149 (232)
Q Consensus        78 -~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~--~g~~-----~~~~~~~~~~~~p~~l~~d~~~~~Ly~  149 (232)
                       -..+-......-..+.+|+ +|.||...    .++|+|.+.  ++..     ...+.... -..-..|.++++ +.||-
T Consensus        78 s~t~IG~~Gw~~F~a~~fD~-~G~LYav~----dG~iyr~~pP~~~~~~Wl~~a~~vg~~g-w~~~~~lff~p~-G~Lya  150 (236)
T 1tl2_A           78 RAKKIGNGGWNQFQFLFFDP-NGYLYAVS----KDKLYKASPPQSDTDNWIARATEVGSGG-WSGFKFLFFHPN-GYLYA  150 (236)
T ss_dssp             HCEEEECSCGGGCSEEEECT-TSCEEEEE----TTEEEEESCCCSTTCCHHHHSEEEECSS-GGGEEEEEECTT-SCEEE
T ss_pred             cccEecccccccceEEEECC-CCCEEEeC----CCEEEEeCCCcCCCCceeccccEeccCC-CCceEEEEECCC-ceEEE
Confidence             2233333444457899997 99999993    368999876  3222     12333322 223477888887 89998


Q ss_pred             EECCCCcEEEEecC-CC------ceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         150 VDADSKSLECMTIR-NR------VRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       150 ~d~~~~~i~~~~~~-g~------~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +.  .+++++.... +.      ..+.+. ..-..-.-+.+. ++.||..+  ++++++..+.
T Consensus       151 v~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~p  209 (236)
T 1tl2_A          151 VH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFYEDYPP  209 (236)
T ss_dssp             EE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEEEESCC
T ss_pred             Ee--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEEecCCc
Confidence            87  5556554333 21      122222 111111223443 77888888  6788888765

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=96.04  E-value=0.48  Score=38.60  Aligned_cols=181  Identities=11%  Similarity=0.033  Sum_probs=106.0

Q ss_pred             CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCc
Q psy5751          10 VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNP   89 (232)
Q Consensus        10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p   89 (232)
                      .++.|..+. .++ .|...++........+......+..+++|  ++ +.++-...+.|...++........+.......
T Consensus       142 d~~~l~~g~-~dg-~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v  216 (435)
T 1p22_A          142 DDQKIVSGL-RDN-TIKIWDKNTLECKRILTGHTGSVLCLQYD--ER-VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAV  216 (435)
T ss_dssp             CSSEEEEEE-SSS-CEEEEESSSCCEEEEECCCSSCEEEEECC--SS-EEEEEETTSCEEEEESSSCCEEEEECCCCSCE
T ss_pred             CCCEEEEEe-CCC-eEEEEeCCCCeEEEEEcCCCCcEEEEEEC--CC-EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcE
Confidence            345554444 445 68888887655444444444556666663  44 44565566889999988766554444455556


Q ss_pred             eEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE--EEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce
Q psy5751          90 RGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF--LKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR  167 (232)
Q Consensus        90 ~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~--~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~  167 (232)
                      ..++.+  .+.|+.+..   .+.|...++........  ...........++++  +..|+.+ ...+.|...+++....
T Consensus       217 ~~l~~~--~~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~-~~dg~i~vwd~~~~~~  288 (435)
T 1p22_A          217 LHLRFN--NGMMVTCSK---DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSA-SGDRTIKVWNTSTCEF  288 (435)
T ss_dssp             EEEECC--TTEEEEEET---TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEE-ETTSEEEEEETTTCCE
T ss_pred             EEEEEc--CCEEEEeeC---CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEE-eCCCeEEEEECCcCcE
Confidence            677776  456555553   35688888765543211  111113345667774  3555544 5577888888886544


Q ss_pred             E-EEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751         168 R-KVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       168 ~-~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g  204 (232)
                      . .+.........+++.++.++... ..+.|...+...
T Consensus       289 ~~~~~~~~~~v~~~~~~~~~l~~g~-~dg~i~iwd~~~  325 (435)
T 1p22_A          289 VRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIEC  325 (435)
T ss_dssp             EEEEECCSSCEEEEEEETTEEEEEE-TTSCEEEEETTT
T ss_pred             EEEEcCCCCcEEEEEeCCCEEEEEe-CCCeEEEEECCC
Confidence            3 33333344556666666555544 457788888763

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=95.97  E-value=0.41  Score=37.32  Aligned_cols=114  Identities=9%  Similarity=0.054  Sum_probs=73.2

Q ss_pred             eEEEEEeCCC--CEEEEEEcCCCCcEEEEEcCC--CceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC
Q psy5751           2 LIGITVDCVE--GQVYYSSVADKSSIKRAHLDG--KNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ   77 (232)
Q Consensus         2 ~~~i~~d~~~--~~ly~~d~~~~~~i~~~~~~g--~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~   77 (232)
                      ..+++|++..  +.++++-..++ .|...+++.  ......+......+..+++.+.++.|+ +-...+.|...++....
T Consensus        42 v~~~~~~~~~~~g~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~  119 (368)
T 3mmy_A           42 IGCLSFSPPTLPGNFLIAGSWAN-DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF-TASCDKTAKMWDLSSNQ  119 (368)
T ss_dssp             EEEEEECCTTSSSEEEEEEETTS-EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE
T ss_pred             eEEEEEcCCCCCceEEEEECCCC-cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE-EEcCCCcEEEEEcCCCC
Confidence            3578999865  46655555556 788888874  333234444456788999998666666 44456889999998776


Q ss_pred             CEEEEeCCCCCceEEEE--eCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          78 PKVIVSKDLVNPRGIVV--HPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        78 ~~~~~~~~~~~p~~iav--d~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                      ...+.. .......+++  ++ ++.++++-..  .+.|...++...
T Consensus       120 ~~~~~~-~~~~v~~~~~~~~~-~~~~l~~~~~--dg~i~vwd~~~~  161 (368)
T 3mmy_A          120 AIQIAQ-HDAPVKTIHWIKAP-NYSCVMTGSW--DKTLKFWDTRSS  161 (368)
T ss_dssp             EEEEEE-CSSCEEEEEEEECS-SCEEEEEEET--TSEEEEECSSCS
T ss_pred             ceeecc-ccCceEEEEEEeCC-CCCEEEEccC--CCcEEEEECCCC
Confidence            555443 4556788888  66 4544444322  355777776543

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=95.75  E-value=0.65  Score=37.85  Aligned_cols=184  Identities=8%  Similarity=0.005  Sum_probs=109.8

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      .+.++  ++.|+.+. .++ .|...++........+......+..++++  ++.| ++-...+.|...++........+.
T Consensus       124 ~~~~~--g~~l~sg~-~dg-~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l-~s~~~dg~i~vwd~~~~~~~~~~~  196 (445)
T 2ovr_B          124 CLQFC--GNRIVSGS-DDN-TLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNII-ISGSTDRTLKVWNAETGECIHTLY  196 (445)
T ss_dssp             EEEEE--TTEEEEEE-TTS-CEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEE-EEEETTSCEEEEETTTTEEEEEEC
T ss_pred             EEEEc--CCEEEEEE-CCC-cEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEE-EEEeCCCeEEEEECCcCcEEEEEC
Confidence            34444  45555544 445 78888887555433343334566777776  4444 455566889999987765444444


Q ss_pred             CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751          84 KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus        84 ~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      ........++.+  .+.|+....   .+.|...++........+... ......++++  +..|+.+ ...+.|...+++
T Consensus       197 ~h~~~v~~~~~~--~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~-~~dg~i~iwd~~  267 (445)
T 2ovr_B          197 GHTSTVRCMHLH--EKRVVSGSR---DATLRVWDIETGQCLHVLMGH-VAAVRCVQYD--GRRVVSG-AYDFMVKVWDPE  267 (445)
T ss_dssp             CCSSCEEEEEEE--TTEEEEEET---TSEEEEEESSSCCEEEEEECC-SSCEEEEEEC--SSCEEEE-ETTSCEEEEEGG
T ss_pred             CCCCcEEEEEec--CCEEEEEeC---CCEEEEEECCCCcEEEEEcCC-cccEEEEEEC--CCEEEEE-cCCCEEEEEECC
Confidence            455566777777  566665553   456888888765544444332 4456677773  3455444 557788888887


Q ss_pred             CCceEEEec-CCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751         164 NRVRRKVYS-NCTYPFGLSITDEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       164 g~~~~~~~~-~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g  204 (232)
                      ......... .......+++++..++.+. ..+.|...+...
T Consensus       268 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~i~d~~~  308 (445)
T 2ovr_B          268 TETCLHTLQGHTNRVYSLQFDGIHVVSGS-LDTSIRVWDVET  308 (445)
T ss_dssp             GTEEEEEECCCSSCEEEEEECSSEEEEEE-TTSCEEEEETTT
T ss_pred             CCcEeEEecCCCCceEEEEECCCEEEEEe-CCCeEEEEECCC
Confidence            654332222 3334556777555555544 457788888763

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=95.68  E-value=0.69  Score=37.63  Aligned_cols=183  Identities=8%  Similarity=-0.006  Sum_probs=106.5

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE---E
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK---V   80 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~---~   80 (232)
                      ++++  .++.|+.+ ..++ .|...+++.......+......+..++++  .+.+ ++-...+.|...++......   .
T Consensus       178 ~l~~--~~~~l~sg-~~dg-~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~dg~i~vwd~~~~~~~~~~~  250 (435)
T 1p22_A          178 CLQY--DERVIITG-SSDS-TVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMM-VTCSKDRSIAVWDMASPTDITLRR  250 (435)
T ss_dssp             EEEC--CSSEEEEE-ETTS-CEEEEESSSCCEEEEECCCCSCEEEEECC--TTEE-EEEETTSCEEEEECSSSSCCEEEE
T ss_pred             EEEE--CCCEEEEE-cCCC-eEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEE-EEeeCCCcEEEEeCCCCCCceeee
Confidence            4445  23444443 3445 68888887554433343333455666665  4544 45556688999998765533   2


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ...........++.+  ++.|+.+..   .+.|...++........+... ......++++.  +.| ++-...+.|...
T Consensus       251 ~~~~~~~~v~~~~~~--~~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~--~~l-~~g~~dg~i~iw  321 (435)
T 1p22_A          251 VLVGHRAAVNVVDFD--DKYIVSASG---DRTIKVWNTSTCEFVRTLNGH-KRGIACLQYRD--RLV-VSGSSDNTIRLW  321 (435)
T ss_dssp             EECCCSSCEEEEEEE--TTEEEEEET---TSEEEEEETTTCCEEEEEECC-SSCEEEEEEET--TEE-EEEETTSCEEEE
T ss_pred             EecCCCCcEEEEEeC--CCEEEEEeC---CCeEEEEECCcCcEEEEEcCC-CCcEEEEEeCC--CEE-EEEeCCCeEEEE
Confidence            333444556677775  566666653   456888888766544444432 34556777752  444 444567789999


Q ss_pred             ecCCCceE-EEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         161 TIRNRVRR-KVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       161 ~~~g~~~~-~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++.+... .+........++++++..|+.. ...+.|...+..
T Consensus       322 d~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg-~~dg~i~vwd~~  364 (435)
T 1p22_A          322 DIECGACLRVLEGHEELVRCIRFDNKRIVSG-AYDGKIKVWDLV  364 (435)
T ss_dssp             ETTTCCEEEEECCCSSCEEEEECCSSEEEEE-ETTSCEEEEEHH
T ss_pred             ECCCCCEEEEEeCCcCcEEEEEecCCEEEEE-eCCCcEEEEECC
Confidence            98865443 3332334455677755555444 445777777754

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=95.56  E-value=1.1  Score=39.22  Aligned_cols=191  Identities=10%  Similarity=-0.013  Sum_probs=100.0

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCc-eeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKN-VEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      ++.||++... + .|+.++..... ..+.-....          ....+++++  ++.||+... .++++.+|.......
T Consensus        77 ~g~vyv~~~~-~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~~-dg~l~alD~~tG~~~  151 (677)
T 1kb0_A           77 DGIMYVSASW-S-VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAW-DGRLIALDAATGKEV  151 (677)
T ss_dssp             TTEEEEECGG-G-CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEE
T ss_pred             CCEEEEECCC-C-eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--CCEEEEEcC-CCEEEEEECCCCCEE
Confidence            5788887653 3 58888876332 222211110          122467776  678997753 478888888544332


Q ss_pred             EEEeCC------CCCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcC-CC---------------CC
Q psy5751          80 VIVSKD------LVNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAA-DL---------------KL  134 (232)
Q Consensus        80 ~~~~~~------~~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~-~~---------------~~  134 (232)
                      =-....      .......++.  ++.+|+.....+   .+.|+.++.......--.... ..               .+
T Consensus       152 W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w  229 (677)
T 1kb0_A          152 WHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW  229 (677)
T ss_dssp             EEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred             eeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence            222211      0111223344  688888764321   356777876544332222211 00               01


Q ss_pred             c---------------ceEEEeCCCCEEEEEECCC------------------CcEEEEecCCCceEEEecC--------
Q psy5751         135 P---------------NSLAVDFRTDELCWVDADS------------------KSLECMTIRNRVRRKVYSN--------  173 (232)
Q Consensus       135 p---------------~~l~~d~~~~~Ly~~d~~~------------------~~i~~~~~~g~~~~~~~~~--------  173 (232)
                      +               ..+++|+..+.||+.....                  +.|..++.+.++..--.+.        
T Consensus       230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~  309 (677)
T 1kb0_A          230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY  309 (677)
T ss_dssp             CGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred             cccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc
Confidence            1               3589999999999885431                  2599999986655433221        


Q ss_pred             --CCceEEEEE-ECC---EEEEEeCCCCcEEEEeCC-CCCcc
Q psy5751         174 --CTYPFGLSI-TDE---KYYWTDWKTNRIESANKE-GERAP  208 (232)
Q Consensus       174 --~~~p~gla~-~~~---~ly~td~~~~~i~~~~~~-g~~~~  208 (232)
                        ...|.-+.. .++   .+++.-..++.++.++.. |+.+.
T Consensus       310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~  351 (677)
T 1kb0_A          310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFIS  351 (677)
T ss_dssp             CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred             ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEec
Confidence              122332222 133   334444445667777765 44433

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=95.51  E-value=1.1  Score=40.76  Aligned_cols=155  Identities=8%  Similarity=-0.072  Sum_probs=95.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI-   81 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~-   81 (232)
                      .+++|.+ ++.|.-+. .++ .|...+++.......+.. -..+..+++++.++.|+... ..+.|...++++...... 
T Consensus        62 ~~l~fsp-g~~L~S~s-~D~-~v~lWd~~~~~~~~~~~~-~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~  136 (902)
T 2oaj_A           62 KEMRFVK-GIYLVVIN-AKD-TVYVLSLYSQKVLTTVFV-PGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFK  136 (902)
T ss_dssp             EEEEEET-TTEEEEEE-TTC-EEEEEETTTCSEEEEEEC-SSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEE
T ss_pred             EEEEEcC-CCEEEEEE-CcC-eEEEEECCCCcEEEEEcC-CCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccccce
Confidence            5788888 55454443 445 799999876543223332 25678899998777777555 457899999887653211 


Q ss_pred             E----------eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-----------------CCCC
Q psy5751          82 V----------SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-----------------DLKL  134 (232)
Q Consensus        82 ~----------~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-----------------~~~~  134 (232)
                      .          ........+++++|.++.++.+...  .+.| ..++........+...                 .-..
T Consensus       137 i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~--dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~  213 (902)
T 2oaj_A          137 LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE--YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK  213 (902)
T ss_dssp             ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS--SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred             eccccccccccccCCCCeEEEEEccCCCCEEEEEeC--CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence            1          1233466899999854444444332  4567 7777655332222210                 0134


Q ss_pred             cceEEEeCCCCEEEEEECCCCcEEEEecCCCc
Q psy5751         135 PNSLAVDFRTDELCWVDADSKSLECMTIRNRV  166 (232)
Q Consensus       135 p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~  166 (232)
                      ...+++++++..| .+-...+.|...+++.++
T Consensus       214 V~~v~fspdg~~l-asgs~Dg~i~lWd~~~g~  244 (902)
T 2oaj_A          214 VIQSLYHPNSLHI-ITIHEDNSLVFWDANSGH  244 (902)
T ss_dssp             EEEEEECTTSSEE-EEEETTCCEEEEETTTCC
T ss_pred             eEEEEEcCCCCEE-EEEECCCeEEEEECCCCc
Confidence            6789999985444 555667788888887544

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=95.47  E-value=0.49  Score=40.71  Aligned_cols=106  Identities=23%  Similarity=0.256  Sum_probs=71.7

Q ss_pred             eEEEEEeCCCCEEEEEEcCCC--------------------CcEEEEEcCCCc------eeEEEe---------------
Q psy5751           2 LIGITVDCVEGQVYYSSVADK--------------------SSIKRAHLDGKN------VEDVIT---------------   40 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~--------------------~~i~~~~~~g~~------~~~~~~---------------   40 (232)
                      |+++.+++.++.+|++-..+.                    +.|+++..++..      ...++.               
T Consensus       386 pEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~~~  465 (592)
T 3zwu_A          386 PEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKGG  465 (592)
T ss_dssp             EEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGGC
T ss_pred             cceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccccc
Confidence            689999999999999965321                    368888765421      111211               


Q ss_pred             -------CCCCCccEEEEeecCCeEEEE-eCC-----------CCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCe
Q psy5751          41 -------TNIRSPEGLTFDWVNRVLYWT-DSQ-----------MDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRK  100 (232)
Q Consensus        41 -------~~~~~p~gl~~d~~~~~ly~~-d~~-----------~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~  100 (232)
                             ..+..|-+|++|+.+ +||++ |..           ++.++..+........++. .......|+++.|..+.
T Consensus       466 ~~~~~~~~~f~~PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~t  544 (592)
T 3zwu_A          466 SSNITPQNMFNSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKT  544 (592)
T ss_dssp             CTTCCTTTCCCCEEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSE
T ss_pred             ccccCCCCCccCCcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCE
Confidence                   125689999999955 56665 432           3567777776555544444 45567889999998899


Q ss_pred             EEEEEcCC
Q psy5751         101 LFWSDWNR  108 (232)
Q Consensus       101 ly~~d~~~  108 (232)
                      ||+.-+..
T Consensus       545 lfvniQHP  552 (592)
T 3zwu_A          545 LFVGIQHP  552 (592)
T ss_dssp             EEEEEEST
T ss_pred             EEEEEECC
Confidence            99987653

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=95.46  E-value=0.7  Score=36.24  Aligned_cols=154  Identities=12%  Similarity=0.051  Sum_probs=90.1

Q ss_pred             CCccEEEEee--cCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751          44 RSPEGLTFDW--VNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG  120 (232)
Q Consensus        44 ~~p~gl~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g  120 (232)
                      ..+..+++.+  .++. +++-...+.|...++.......+.. ........++++| ++.++.+-..  .+.|...++..
T Consensus       126 ~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~--dg~i~iwd~~~  201 (343)
T 3lrv_A          126 NEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSP--DGILDVYNLSS  201 (343)
T ss_dssp             SCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECT--TSCEEEEESSC
T ss_pred             CCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcC--CCEEEEEECCC
Confidence            4577888887  5554 4455566889999988766544443 2333578999998 5555555332  45688888876


Q ss_pred             CCcE-EEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecC---CCce---EEEEEE-CC-EEEEEe
Q psy5751         121 TDRE-IFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN---CTYP---FGLSIT-DE-KYYWTD  191 (232)
Q Consensus       121 ~~~~-~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~---~~~p---~gla~~-~~-~ly~td  191 (232)
                      .... ..+..........+++++.+..|..+.  .+.|...+++..........   -..+   ..+++. .+ .|..+.
T Consensus       202 ~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s  279 (343)
T 3lrv_A          202 PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS  279 (343)
T ss_dssp             TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred             CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence            6543 222221145678999999877777766  33888888876533111111   0111   347775 34 444433


Q ss_pred             CCCCcEEEEeCC
Q psy5751         192 WKTNRIESANKE  203 (232)
Q Consensus       192 ~~~~~i~~~~~~  203 (232)
                      ...+.+...+..
T Consensus       280 ~~d~~i~v~~~~  291 (343)
T 3lrv_A          280 NESNSLTIYKFD  291 (343)
T ss_dssp             TTTTEEEEEEEC
T ss_pred             CCCCcEEEEEEc
Confidence            425555555543

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.42  E-value=1  Score=39.74  Aligned_cols=184  Identities=10%  Similarity=0.021  Sum_probs=99.0

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCC------Ccee--EEEe--CCC--CCccEEEEeecCCeEEEEeCCCCeEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDG------KNVE--DVIT--TNI--RSPEGLTFDWVNRVLYWTDSQMDTISMA   71 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g------~~~~--~~~~--~~~--~~p~gl~~d~~~~~ly~~d~~~~~I~~~   71 (232)
                      ++..|. ++.||++-...  .|++++.+.      ....  ....  .++  ..+..|..|. .+.||+.....+.|.++
T Consensus       423 ~i~~d~-~g~lWigT~~~--Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~~  498 (758)
T 3ott_A          423 YIFEDT-AGQLWISTCLG--GIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDKI  498 (758)
T ss_dssp             EEEECT-TSEEEEEESSS--CEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEEE
T ss_pred             EEEEcC-CCCEEEEECCC--ceEEEccccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCCCcEEE
Confidence            444554 56776655433  377776542      1110  1111  112  2467788886 56677633333568888


Q ss_pred             eCCCCCCEEEEeCC---CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-CCCCcceEEEeCCCCEE
Q psy5751          72 NLNDDQPKVIVSKD---LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-DLKLPNSLAVDFRTDEL  147 (232)
Q Consensus        72 ~~~g~~~~~~~~~~---~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-~~~~p~~l~~d~~~~~L  147 (232)
                      +........+....   ...+.++..|. +|.||++..+    -+.+.+......+...... ......++..+  .+.|
T Consensus       499 d~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~lWigt~~----Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~--~g~l  571 (758)
T 3ott_A          499 NPRTREVTKLFADELTGEKSPNYLLCDE-DGLLWVGFHG----GVMRINPKDESQQSISFGSFSNNEILSMTCV--KNSI  571 (758)
T ss_dssp             ETTTTEEEEECTTTSCGGGCEEEEEECT-TSCEEEEETT----EEEEECC--CCCCBCCCCC---CCEEEEEEE--TTEE
T ss_pred             eCCCCceEEecCCCcCCCcccceEEECC-CCCEEEEecC----ceEEEecCCCceEEecccCCCccceEEEEEC--CCCE
Confidence            88654433332211   13567888885 8899887643    2788776554333221111 01234566554  5899


Q ss_pred             EEEECCCCcEEEEecCCCceEEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         148 CWVDADSKSLECMTIRNRVRRKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       148 y~~d~~~~~i~~~~~~g~~~~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      |++-  ..-+.++++.....+... .... -.+.++.  +|.||+.-  .+-+.+++|.
T Consensus       572 Wi~t--~~Gl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~l~fG~--~~Gl~~f~p~  625 (758)
T 3ott_A          572 WVST--TNGLWIIDRKTMDARQQNMTNKR-FTSLLFDPKEDCVYLGG--ADGFGISHSN  625 (758)
T ss_dssp             EEEE--SSCEEEEETTTCCEEEC--CCCC-CSEEEEETTTTEEEEEC--BSEEEEEEC-
T ss_pred             EEEC--CCCeEEEcCCCceeEEecCCCCc-eeeeEEECCCCcEEEec--CCceEEEChh
Confidence            8886  345899988865544321 1111 1133333  78899864  4568888886

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=95.38  E-value=1.1  Score=38.26  Aligned_cols=194  Identities=10%  Similarity=-0.007  Sum_probs=102.4

Q ss_pred             CCEEEEEEcCCCCcEEEEEc--CCCceeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHL--DGKNVEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~--~g~~~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ++.||++...++ .|+.++.  +|....+.-....          ....+++++  ++.||+... .+.++.+|......
T Consensus        62 ~g~vyv~~~~~~-~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-dg~l~alD~~tG~~  137 (571)
T 2ad6_A           62 GDMMYVHSAFPN-NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQA-NGHLLALDAKTGKI  137 (571)
T ss_dssp             TTEEEEECSTTT-CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCE
T ss_pred             CCEEEEEeCCCC-EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CCEEEEEeC-CCEEEEEECCCCCE
Confidence            678888875345 6888887  4544333321110          012356776  678987754 46888888754432


Q ss_pred             EEEEe-CCC----CCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcC-CC----CCc----------
Q psy5751          79 KVIVS-KDL----VNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAA-DL----KLP----------  135 (232)
Q Consensus        79 ~~~~~-~~~----~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~-~~----~~p----------  135 (232)
                      .=... ...    .-....++.  ++.+|+.....+   .+.|+.++.......--.... ..    ..|          
T Consensus       138 ~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G  215 (571)
T 2ad6_A          138 NWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG  215 (571)
T ss_dssp             EEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred             EEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence            21111 110    011122344  678888764311   456888887644332222211 00    000          


Q ss_pred             ----------------------ceEEEeCCCCEEEEEECC---------------CCcEEEEecCCCceEEEecC-----
Q psy5751         136 ----------------------NSLAVDFRTDELCWVDAD---------------SKSLECMTIRNRVRRKVYSN-----  173 (232)
Q Consensus       136 ----------------------~~l~~d~~~~~Ly~~d~~---------------~~~i~~~~~~g~~~~~~~~~-----  173 (232)
                                            ..+++|+..+.+|+....               .+.|..++.+.++..--.+.     
T Consensus       216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~  295 (571)
T 2ad6_A          216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE  295 (571)
T ss_dssp             CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred             ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence                                  247899988999998642               13699999987655433221     


Q ss_pred             -----CCceEEEEE-ECC---EEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751         174 -----CTYPFGLSI-TDE---KYYWTDWKTNRIESANKE-GERAPSI  210 (232)
Q Consensus       174 -----~~~p~gla~-~~~---~ly~td~~~~~i~~~~~~-g~~~~~i  210 (232)
                           ...|.-+.. .++   ++++.-..++.++.+++. |+.+..+
T Consensus       296 ~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~  342 (571)
T 2ad6_A          296 WDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE  342 (571)
T ss_dssp             SCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             cccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence                 123332222 134   344444445677777765 4444333

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=95.29  E-value=1.2  Score=38.07  Aligned_cols=98  Identities=9%  Similarity=-0.035  Sum_probs=56.0

Q ss_pred             eEEEEeCCCCeEEEEEcC----------------------------------CCCCcEEEEeCCCCCcEEEEEcCCCCCc
Q psy5751          90 RGIVVHPYYRKLFWSDWN----------------------------------RSGPKIEWSNLDGTDREIFLKAADLKLP  135 (232)
Q Consensus        90 ~~iavd~~~~~ly~~d~~----------------------------------~~~~~I~~~~~~g~~~~~~~~~~~~~~p  135 (232)
                      .++++||.++.+|+....                                  ...+.++.+++......--....  ..+
T Consensus       389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~--~~~  466 (571)
T 2ad6_A          389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK--FAA  466 (571)
T ss_dssp             CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES--SCC
T ss_pred             CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC--CCc
Confidence            458899999999987531                                  11346777776544332222221  122


Q ss_pred             ceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec----CCCceEEEEE-ECCEEEEEeC
Q psy5751         136 NSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS----NCTYPFGLSI-TDEKYYWTDW  192 (232)
Q Consensus       136 ~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~----~~~~p~gla~-~~~~ly~td~  192 (232)
                      .+..+...++.+|+. ...+.+..++.+.++..--..    ....|.  .+ .++++|++..
T Consensus       467 ~~~~~~t~gg~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~--~~~~~G~~yv~~~  525 (571)
T 2ad6_A          467 WGGTLYTKGGLVWYA-TLDGYLKALDNKDGKELWNFKMPSGGIGSPM--TYSFKGKQYIGSM  525 (571)
T ss_dssp             CSBCEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEE
T ss_pred             cceeEEECCCEEEEE-cCCCeEEEEECCCCCEEEEEeCCCCcEeeeE--EEEECCEEEEEEE
Confidence            333444445888886 457889999987655432222    122333  33 5788888744

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=95.08  E-value=1.6  Score=38.22  Aligned_cols=59  Identities=10%  Similarity=-0.013  Sum_probs=35.4

Q ss_pred             CcEEEEecCCCceEEEecCCCceEE--EEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEecc
Q psy5751         155 KSLECMTIRNRVRRKVYSNCTYPFG--LSITDEKYYWTDWKTNRIESANKE-GERAPSIALDM  214 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~~~~~~p~g--la~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~  214 (232)
                      +.|..+|+..++..--........+  ++..++.+|+. ...+.+..++.. |+.+..+..+.
T Consensus       457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~  518 (677)
T 1kb0_A          457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPTGT  518 (677)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeCCC
Confidence            5688888876554322221111222  33457788887 456888889876 66666666543

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=94.43  E-value=2.1  Score=36.75  Aligned_cols=146  Identities=5%  Similarity=-0.025  Sum_probs=92.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-------eEEEe----CCCCCccEEEEeecCCeEEEEeCCCCeEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-------EDVIT----TNIRSPEGLTFDWVNRVLYWTDSQMDTISM   70 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-------~~~~~----~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~   70 (232)
                      ..+++|++.++.|+.+... + .|...++++...       -..+.    .....+..+++.+.+   +.+-...+.+..
T Consensus       132 v~svafSPDG~~LAsgs~D-G-tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrl  206 (588)
T 2j04_A          132 YHCFEWNPIESSIVVGNED-G-ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFS  206 (588)
T ss_dssp             EEEEEECSSSSCEEEEETT-S-EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEE
T ss_pred             EEEEEEcCCCCEEEEEcCC-C-EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEE
Confidence            4589999988888877654 4 688888887542       12222    123578888888744   456566788999


Q ss_pred             EeCCCCCCE----EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEE--eCCC
Q psy5751          71 ANLNDDQPK----VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAV--DFRT  144 (232)
Q Consensus        71 ~~~~g~~~~----~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~--d~~~  144 (232)
                      .++++....    .+-..+.....+++..  ++.|-.+.    .+.|...+..+.......... ....+++++  ++++
T Consensus       207 Wd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~----~~tIkLWd~~~~~~~~~~~gh-~~~V~~va~~~s~d~  279 (588)
T 2j04_A          207 MTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC----PGYVHKIDLKNYSISSLKTGS-LENFHIIPLNHEKES  279 (588)
T ss_dssp             ECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC----SSEEEEEETTTTEEEEEECSC-CSCCCEEEETTCSSC
T ss_pred             EECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe----CCeEEEEECCCCeEEEEEcCC-CceEEEEEeeeCCCC
Confidence            999887743    2322334567888887  45554443    257999998887665555332 566788999  7764


Q ss_pred             CEEEEEECCCC-cEEEE
Q psy5751         145 DELCWVDADSK-SLECM  160 (232)
Q Consensus       145 ~~Ly~~d~~~~-~i~~~  160 (232)
                      ..|-.+. .++ ++|..
T Consensus       280 ~~La~a~-edG~klw~~  295 (588)
T 2j04_A          280 TILLMSN-KTSYKVLLE  295 (588)
T ss_dssp             EEEEECS-SCEEEEEES
T ss_pred             CEEEEEc-CCCCEEEee
Confidence            3443333 233 35553

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=94.40  E-value=1.3  Score=33.96  Aligned_cols=197  Identities=9%  Similarity=0.039  Sum_probs=112.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc--eeEEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCCC--
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN--VEDVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDDQ--   77 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~--~~~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~~--   77 (232)
                      .+++|++..+.|.-+. .++ .|...++++..  ....+...-..+.++++.+. .+.+..+-...+.|...++....  
T Consensus        13 ~~~~~s~~g~~las~s-~D~-~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~   90 (297)
T 2pm7_B           13 HDAVMDYYGKRMATCS-SDK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS   90 (297)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC
T ss_pred             EEEEECCCCCEEEEEe-CCC-EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE
Confidence            4788998666655444 445 68888887432  22233333456677887542 24455566677889999987643  


Q ss_pred             CEEEEeCCCCCceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCC-c-EEEEEcCCCCCcceEEEeCCC----------
Q psy5751          78 PKVIVSKDLVNPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTD-R-EIFLKAADLKLPNSLAVDFRT----------  144 (232)
Q Consensus        78 ~~~~~~~~~~~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~-~-~~~~~~~~~~~p~~l~~d~~~----------  144 (232)
                      ....+.........+++.|.. +.++.+-..  .+.|...++.... . ...+... ....+.+++++..          
T Consensus        91 ~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~--d~~v~~wd~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~~  167 (297)
T 2pm7_B           91 QIAVHAVHSASVNSVQWAPHEYGPMLLVASS--DGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAPATIEEDGEHNGT  167 (297)
T ss_dssp             CCEEECCCSSCEEEEEECCGGGCSEEEEEET--TSEEEEEEBCSSSCBCCEEEECC-SSCEEEEEECCCC----------
T ss_pred             EEEEeecCCCceeEEEeCcCCCCcEEEEEEC--CCcEEEEEecCCCceeeeeeecc-cCccceEeecCCcccccccCCCC
Confidence            222333344567889998752 444444322  3567777765442 1 1222221 3455678887752          


Q ss_pred             --CEEEEEECCCCcEEEEecCCCce-----EEEecCCCceEEEEEEC----CEEEEEeCCCCcEEEEeCCC
Q psy5751         145 --DELCWVDADSKSLECMTIRNRVR-----RKVYSNCTYPFGLSITD----EKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       145 --~~Ly~~d~~~~~i~~~~~~g~~~-----~~~~~~~~~p~gla~~~----~~ly~td~~~~~i~~~~~~g  204 (232)
                        ++++.+-...+.|...+++....     ..+........++++..    +.++.+-...+.|...+...
T Consensus       168 ~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~  238 (297)
T 2pm7_B          168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN  238 (297)
T ss_dssp             --CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred             CCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence              34555555667777777764431     12222334456788752    36666666667777777654

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=94.31  E-value=1.6  Score=34.66  Aligned_cols=177  Identities=10%  Similarity=0.063  Sum_probs=96.5

Q ss_pred             CCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCC---
Q psy5751          11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDL---   86 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~---   86 (232)
                      ++.||+.... + .|+.++.+ |....+.-... ......+++  ++.||+.. ..+.|+.+|.......-......   
T Consensus       103 ~~~v~v~~~~-g-~l~a~d~~tG~~~W~~~~~~-~~~~~p~~~--~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~~~~  176 (376)
T 3q7m_A          103 GGHVYIGSEK-A-QVYALNTSDGTVAWQTKVAG-EALSRPVVS--DGLVLIHT-SNGQLQALNEADGAVKWTVNLDMPSL  176 (376)
T ss_dssp             TTEEEEEETT-S-EEEEEETTTCCEEEEEECSS-CCCSCCEEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC---
T ss_pred             CCEEEEEcCC-C-EEEEEECCCCCEEEEEeCCC-ceEcCCEEE--CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCCCce
Confidence            5677776543 3 68888876 44332332221 111222344  56777654 44678888874433221111110   


Q ss_pred             --CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCc-------------ceEEEeCCCCEEEEEE
Q psy5751          87 --VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLP-------------NSLAVDFRTDELCWVD  151 (232)
Q Consensus        87 --~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p-------------~~l~~d~~~~~Ly~~d  151 (232)
                        ......+++  ++.+|+...   .+.++.++.......-....   ..|             ....++  ++.+|+..
T Consensus       177 ~~~~~~~~~~~--~~~v~~g~~---~g~l~~~d~~tG~~~w~~~~---~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~  246 (376)
T 3q7m_A          177 SLRGESAPTTA--FGAAVVGGD---NGRVSAVLMEQGQMIWQQRI---SQATGSTEIDRLSDVDTTPVVV--NGVVFALA  246 (376)
T ss_dssp             --CCCCCCEEE--TTEEEECCT---TTEEEEEETTTCCEEEEEEC---CC-----------CCCCCCEEE--TTEEEEEC
T ss_pred             eecCCCCcEEE--CCEEEEEcC---CCEEEEEECCCCcEEEEEec---ccCCCCcccccccccCCCcEEE--CCEEEEEe
Confidence              011234455  677777542   35677777754333222211   111             111223  47888874


Q ss_pred             CCCCcEEEEecCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCC
Q psy5751         152 ADSKSLECMTIRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKE-GER  206 (232)
Q Consensus       152 ~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~  206 (232)
                       ..+.+.+++...++.. .......+.+++++++.||++... +.+..+++. |+.
T Consensus       247 -~~g~l~~~d~~tG~~~-w~~~~~~~~~~~~~~~~l~~~~~~-g~l~~~d~~tG~~  299 (376)
T 3q7m_A          247 -YNGNLTALDLRSGQIM-WKRELGSVNDFIVDGNRIYLVDQN-DRVMALTIDGGVT  299 (376)
T ss_dssp             -TTSCEEEEETTTCCEE-EEECCCCEEEEEEETTEEEEEETT-CCEEEEETTTCCE
T ss_pred             -cCcEEEEEECCCCcEE-eeccCCCCCCceEECCEEEEEcCC-CeEEEEECCCCcE
Confidence             4678999998755443 222344566778889999999864 678999986 443

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=94.26  E-value=1.6  Score=34.59  Aligned_cols=136  Identities=13%  Similarity=0.091  Sum_probs=81.4

Q ss_pred             CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCC
Q psy5751          55 NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKL  134 (232)
Q Consensus        55 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~  134 (232)
                      ++.||+... .+.++.++.......  .......+.+++++  ++.||+....   +.++.++.......-.........
T Consensus       239 ~~~v~~~~~-~g~l~~~d~~tG~~~--w~~~~~~~~~~~~~--~~~l~~~~~~---g~l~~~d~~tG~~~w~~~~~~~~~  310 (376)
T 3q7m_A          239 NGVVFALAY-NGNLTALDLRSGQIM--WKRELGSVNDFIVD--GNRIYLVDQN---DRVMALTIDGGVTLWTQSDLLHRL  310 (376)
T ss_dssp             TTEEEEECT-TSCEEEEETTTCCEE--EEECCCCEEEEEEE--TTEEEEEETT---CCEEEEETTTCCEEEEECTTTTSC
T ss_pred             CCEEEEEec-CcEEEEEECCCCcEE--eeccCCCCCCceEE--CCEEEEEcCC---CeEEEEECCCCcEEEeecccCCCc
Confidence            578887754 468898988544322  23234456778887  8999999853   468999886554332222110122


Q ss_pred             cceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecC--CCceEEEEEECCEEEEEeCCCCcEEEEeC
Q psy5751         135 PNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN--CTYPFGLSITDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       135 p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~--~~~p~gla~~~~~ly~td~~~~~i~~~~~  202 (232)
                      .....+.  ++.||+.+. .+.+.+++.+.++.......  .......++.++.||+.... +.|+.+++
T Consensus       311 ~~~~~~~--~~~l~v~~~-~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~-G~l~~~~~  376 (376)
T 3q7m_A          311 LTSPVLY--NGNLVVGDS-EGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKD-GTVYSITR  376 (376)
T ss_dssp             CCCCEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTT-SCEEEEEC
T ss_pred             ccCCEEE--CCEEEEEeC-CCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCC-CEEEEEeC
Confidence            2334444  478988854 67899999876544322221  11122334578999998764 66777653

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=94.16  E-value=2.7  Score=36.72  Aligned_cols=77  Identities=12%  Similarity=-0.034  Sum_probs=48.5

Q ss_pred             ceEEEeCCCCEEEEEEC-----------------------------------CCCcEEEEecCCCceEEEecCCCceE--
Q psy5751         136 NSLAVDFRTDELCWVDA-----------------------------------DSKSLECMTIRNRVRRKVYSNCTYPF--  178 (232)
Q Consensus       136 ~~l~~d~~~~~Ly~~d~-----------------------------------~~~~i~~~~~~g~~~~~~~~~~~~p~--  178 (232)
                      .++++|+..+.+|+...                                   ..+.|..+|+..++..--........  
T Consensus       384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~  463 (668)
T 1kv9_A          384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGG  463 (668)
T ss_dssp             SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCC
T ss_pred             CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCc
Confidence            35899999999998421                                   11568888887665432222111122  


Q ss_pred             EEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEec
Q psy5751         179 GLSITDEKYYWTDWKTNRIESANKE-GERAPSIALD  213 (232)
Q Consensus       179 gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~  213 (232)
                      .++..++.||+.. ..+.+..++.. |+.+..+..+
T Consensus       464 ~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~~~~  498 (668)
T 1kv9_A          464 TLSTAGNLVFQGT-AAGQMHAYSADKGEALWQFEAQ  498 (668)
T ss_dssp             EEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEECS
T ss_pred             eeEeCCCEEEEEC-CcccchhhhhhcChhheEecCC
Confidence            3445688888884 46788999876 6666666554

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=93.92  E-value=2.6  Score=35.65  Aligned_cols=194  Identities=6%  Similarity=-0.103  Sum_probs=105.8

Q ss_pred             EEEEEeCC-----CCEEEEEEcCCCCcEEEEEcCCCcee-----------EEEeCCCCCccEEEEeecCCeEEEEeCCCC
Q psy5751           3 IGITVDCV-----EGQVYYSSVADKSSIKRAHLDGKNVE-----------DVITTNIRSPEGLTFDWVNRVLYWTDSQMD   66 (232)
Q Consensus         3 ~~i~~d~~-----~~~ly~~d~~~~~~i~~~~~~g~~~~-----------~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~   66 (232)
                      .+++|.+.     ++.+..+-..++ .|...+++.....           ..+...-..+.++++.+ .+.| .+-...+
T Consensus       211 ~~v~wsp~~~~~~~~~~LAs~s~Dg-tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~~l-asgs~Dg  287 (524)
T 2j04_B          211 WDLKWHEGCHAPHLVGCLSFVSQEG-TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-PTTV-VCGFKNG  287 (524)
T ss_dssp             EEEEECSSCCCSSSSCEEEEEETTS-CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-SSEE-EEEETTS
T ss_pred             EEEEECCCCCCCCCCceEEEEecCC-eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-CCeE-EEEeCCC
Confidence            46778774     134444444455 7888887643210           12222224566677764 3444 4666778


Q ss_pred             eEEEEeCCCC-CCEEEEeCCCCCceEEE-EeCCCC-eEEEEEcCCCCCcEEEEeCCCCC-cEEEEEcCCCCCcceEEEeC
Q psy5751          67 TISMANLNDD-QPKVIVSKDLVNPRGIV-VHPYYR-KLFWSDWNRSGPKIEWSNLDGTD-REIFLKAADLKLPNSLAVDF  142 (232)
Q Consensus        67 ~I~~~~~~g~-~~~~~~~~~~~~p~~ia-vd~~~~-~ly~~d~~~~~~~I~~~~~~g~~-~~~~~~~~~~~~p~~l~~d~  142 (232)
                      .|...|+... .+...+........+++ ..+..+ .++.+-..  .+.|...++.... ...+...........+++++
T Consensus       288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~--D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp  365 (524)
T 2j04_B          288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV--DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP  365 (524)
T ss_dssp             EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET--TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred             EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc--CCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence            9999999754 33344444555677884 233355 66665543  4567777765432 22222221012356899999


Q ss_pred             CCCEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         143 RTDELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       143 ~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      +... +.+-...+.|...++..... ..+........+|++. .+.++.+-...+.|...+.
T Consensus       366 ~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~  426 (524)
T 2j04_B          366 QIYS-YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA  426 (524)
T ss_dssp             TTTE-EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred             CcCe-EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence            7444 55655666788878775443 4444444455666663 3444444444455544443

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=93.89  E-value=1.8  Score=33.89  Aligned_cols=151  Identities=11%  Similarity=0.078  Sum_probs=88.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-   79 (232)
                      .+++|++..+.|..+... + .|...+++....+  ..+......+.++++.+.++.| .+-...+.|...+++..... 
T Consensus        65 ~~~~~sp~g~~l~s~s~D-~-~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-~s~s~D~~v~iwd~~~~~~~~  141 (345)
T 3fm0_A           65 RKVAWSPCGNYLASASFD-A-TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL-ATCSRDKSVWVWEVDEEDEYE  141 (345)
T ss_dssp             EEEEECTTSSEEEEEETT-S-CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECTTSCEE
T ss_pred             EEEEECCCCCEEEEEECC-C-cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEE-EEEECCCeEEEEECCCCCCeE
Confidence            478898866666655543 3 5666666654322  2233334577899998865555 45556678998888765432 


Q ss_pred             --EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          80 --VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        80 --~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                        ..+.........++.+|....|..+...   +.|...++......... .........++++++++..|..+. ..+.
T Consensus       142 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s-~D~~  217 (345)
T 3fm0_A          142 CVSVLNSHTQDVKHVVWHPSQELLASASYD---DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS-DDRT  217 (345)
T ss_dssp             EEEEECCCCSCEEEEEECSSSSCEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSC
T ss_pred             EEEEecCcCCCeEEEEECCCCCEEEEEeCC---CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe-CCCe
Confidence              2333455567889999865555555433   34666655543322211 111244678999999866665553 4444


Q ss_pred             EEEE
Q psy5751         157 LECM  160 (232)
Q Consensus       157 i~~~  160 (232)
                      |...
T Consensus       218 v~iW  221 (345)
T 3fm0_A          218 VRIW  221 (345)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            4333

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=93.55  E-value=2.1  Score=33.36  Aligned_cols=196  Identities=8%  Similarity=-0.027  Sum_probs=100.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-------eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-------VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-------~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      .+++|++..+.|.-+. .++ .|...++....       ....+......+.++++.+.++.|. +-...+.|...+++.
T Consensus        62 ~~v~~sp~~~~las~s-~D~-~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~la-s~s~D~~v~iwd~~~  138 (330)
T 2hes_X           62 RSVAWRPHTSLLAAGS-FDS-TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLA-TCSRDKSVWIWETDE  138 (330)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEE-EEETTSCEEEEECCT
T ss_pred             EEEEECCCCCEEEEEe-CCC-cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEE-EEeCCCEEEEEeccC
Confidence            4788988666555444 344 67777764311       1122223345678899988655554 555667899998843


Q ss_pred             C--CCE--EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-EcCCCCCcceEEEeCCC-CEEEE
Q psy5751          76 D--QPK--VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-KAADLKLPNSLAVDFRT-DELCW  149 (232)
Q Consensus        76 ~--~~~--~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~~~~~~~p~~l~~d~~~-~~Ly~  149 (232)
                      .  ..+  ..+.........++.+|....|.-+...   +.|...+......+.+. ..........+++++.. +.+..
T Consensus       139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D---~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~  215 (330)
T 2hes_X          139 SGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD---DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC  215 (330)
T ss_dssp             TCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred             CCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC---CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence            2  222  2333455567899999855555444433   34555554433212221 11113456788998863 23334


Q ss_pred             EECCCCcEEEEecCCCc-----e-EEE--ec--CCCceEEEEEECCEEEEEeCCCCcEEEEeCCC
Q psy5751         150 VDADSKSLECMTIRNRV-----R-RKV--YS--NCTYPFGLSITDEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       150 ~d~~~~~i~~~~~~g~~-----~-~~~--~~--~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +-...+.|...++++..     . ...  ..  .......+++..+.++.+-...+.|...+...
T Consensus       216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~  280 (330)
T 2hes_X          216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVD  280 (330)
T ss_dssp             EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEET
T ss_pred             EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCC
Confidence            44445555555554321     0 111  11  12234566665333445544556666666553

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=93.51  E-value=3.7  Score=36.17  Aligned_cols=190  Identities=9%  Similarity=-0.028  Sum_probs=104.6

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      ++..|. ++.||++-  .. .+++++................+..+..+  .+.||++...  .|++++........+..
T Consensus        67 ~i~~d~-~g~lWigT--~~-Gl~~yd~~~~~f~~~~~~~~~~i~~i~~~--~g~lWigt~~--Gl~~~~~~~~~~~~~~~  138 (758)
T 3ott_A           67 CGVIID-NTYLYMGT--DN-GILVYNYRADRYEQPETDFPTDVRTMALQ--GDTLWLGALN--GLYTYQLQSRKLTSFDT  138 (758)
T ss_dssp             EEEEET-TTEEEEEE--TT-EEEEEETTTTEECCCSCCCCSCEEEEEEE--TTEEEEEETT--EEEEEETTTCCEEEECH
T ss_pred             EEEEcC-CCcEEEEe--CC-CeEEEeCCCCEEECcccCCCceEEEEEec--CCcEEEEcCC--cceeEeCCCCeEEEecc
Confidence            455665 67787765  23 58888876543221000111233444433  6788877643  68888876544333311


Q ss_pred             ----CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC--C--CCcceEEEeCCCCEEEEEECCCC
Q psy5751          84 ----KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD--L--KLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        84 ----~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~--~--~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                          ........++.|. ++.||+....    -+.+.+........+.....  +  .....|..|..++.||+...  +
T Consensus       139 ~~~~l~~~~i~~i~~d~-~g~lWigt~~----Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~--~  211 (758)
T 3ott_A          139 RRNGLPNNTIYSIIRTK-DNQIYVGTYN----GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE--G  211 (758)
T ss_dssp             HHHCCSCSCEEEEEECT-TCCEEEEETT----EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE--E
T ss_pred             CCCCcCCCeEEEEEEcC-CCCEEEEeCC----CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC--C
Confidence                1123456788886 7888887632    27777766543332211110  1  12456778876667777652  4


Q ss_pred             cEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceE
Q psy5751         156 SLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSI  210 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i  210 (232)
                      .+.+++......+.+.. .......++.+ ++.||+.-.  +-+.++++.....+.+
T Consensus       212 Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--~Gl~~~~~~~~~~~~~  266 (758)
T 3ott_A          212 YLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTD--NGLYVYHNDTTPLQHI  266 (758)
T ss_dssp             EEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEET--TEEEEECCTTSCCEEE
T ss_pred             CCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeC--CceeEEecCCCcEEEE
Confidence            58888877654333321 11123455565 677887753  3588888775544433

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=93.35  E-value=2.1  Score=32.74  Aligned_cols=197  Identities=8%  Similarity=0.013  Sum_probs=105.0

Q ss_pred             EEEEEeCC-CCEEEEEEcCCCCcEEEEEcCCCce--eEEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCC-
Q psy5751           3 IGITVDCV-EGQVYYSSVADKSSIKRAHLDGKNV--EDVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQ-   77 (232)
Q Consensus         3 ~~i~~d~~-~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~-   77 (232)
                      .+++|.+. .+.++.+-..++ .|...++.....  ...+......+..+++.+.. +.++.+-...+.|...++.... 
T Consensus        57 ~~v~~s~~~~g~~l~s~s~D~-~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~  135 (297)
T 2pm7_B           57 WRVDWAHPKFGTILASCSYDG-KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT  135 (297)
T ss_dssp             EEEEECCGGGCSEEEEEETTT-EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC
T ss_pred             EEEEecCCCcCCEEEEEcCCC-EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc
Confidence            36777542 244444544555 788888875421  12222233567888887751 3344455566889888886542 


Q ss_pred             -CEEEEeCCCCCceEEEEeCCC------------CeEEEEEcCCCCCcEEEEeCCCCCcEE-EE--EcCCCCCcceEEEe
Q psy5751          78 -PKVIVSKDLVNPRGIVVHPYY------------RKLFWSDWNRSGPKIEWSNLDGTDREI-FL--KAADLKLPNSLAVD  141 (232)
Q Consensus        78 -~~~~~~~~~~~p~~iavd~~~------------~~ly~~d~~~~~~~I~~~~~~g~~~~~-~~--~~~~~~~p~~l~~d  141 (232)
                       ....+.........++..|..            +.++.+-..  .+.|...++....... +.  ....-....+++++
T Consensus       136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~--D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s  213 (297)
T 2pm7_B          136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS  213 (297)
T ss_dssp             BCCEEEECCSSCEEEEEECCCC------------CCEEEEEET--TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred             eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC--CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC
Confidence             123344455566778887742            334444332  3456666655433211 11  11113456899999


Q ss_pred             CCC--CEEEEEECCCCcEEEEecCCCc---eEEEec--C-CCceEEEEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         142 FRT--DELCWVDADSKSLECMTIRNRV---RRKVYS--N-CTYPFGLSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       142 ~~~--~~Ly~~d~~~~~i~~~~~~g~~---~~~~~~--~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      +..  +.+..+-+..+.|...+++...   ...+..  . ......+++. .+.+..+-...+.|...+.
T Consensus       214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~  283 (297)
T 2pm7_B          214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE  283 (297)
T ss_dssp             CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred             CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence            974  4566666667777777776532   222331  2 2234567774 4444444444455544443

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=92.86  E-value=3.1  Score=33.48  Aligned_cols=151  Identities=10%  Similarity=0.039  Sum_probs=90.0

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeC--CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITT--NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLV   87 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~--~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~   87 (232)
                      ++.++++-..++ .|...++........+..  ....+.++++++.++.|+ +-...+.|...++........+. ....
T Consensus       181 ~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~  258 (437)
T 3gre_A          181 EKSLLVALTNLS-RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLI-LGTTRGIIDIWDIRFNVLIRSWSFGDHA  258 (437)
T ss_dssp             SCEEEEEEETTS-EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEE-EEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred             CCCEEEEEeCCC-eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEE-EEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence            355555555556 899999986554334433  346789999988655555 55556889999987644333332 2333


Q ss_pred             CceEEEEeCC---CCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-------------------------CCCCcceEE
Q psy5751          88 NPRGIVVHPY---YRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-------------------------DLKLPNSLA  139 (232)
Q Consensus        88 ~p~~iavd~~---~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-------------------------~~~~p~~l~  139 (232)
                      ....+++.|.   ++.++++...  .+.|...++........+...                         .......++
T Consensus       259 ~v~~~~~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~  336 (437)
T 3gre_A          259 PITHVEVCQFYGKNSVIVVGGSS--KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS  336 (437)
T ss_dssp             EEEEEEECTTTCTTEEEEEEEST--TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred             ceEEEEeccccCCCccEEEEEcC--CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence            4567766542   3445554433  456888888654433222211                         011245688


Q ss_pred             EeCCCCEEEEEECCCCcEEEEecCCCce
Q psy5751         140 VDFRTDELCWVDADSKSLECMTIRNRVR  167 (232)
Q Consensus       140 ~d~~~~~Ly~~d~~~~~i~~~~~~g~~~  167 (232)
                      ++ . +.+.++-...+.|...++...+.
T Consensus       337 ~~-~-~~~l~s~~~d~~i~~wd~~~~~~  362 (437)
T 3gre_A          337 VS-N-DKILLTDEATSSIVMFSLNELSS  362 (437)
T ss_dssp             EE-T-TEEEEEEGGGTEEEEEETTCGGG
T ss_pred             EC-C-ceEEEecCCCCeEEEEECCCccc
Confidence            88 4 46666767788899988876543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=92.75  E-value=1.9  Score=36.44  Aligned_cols=152  Identities=9%  Similarity=-0.107  Sum_probs=88.5

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCC-ceeEEEeCCCCCccEEEEe-ecCC-eEEEEeCCCCeEEEEeCCCCCC-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGK-NVEDVITTNIRSPEGLTFD-WVNR-VLYWTDSQMDTISMANLNDDQP-   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~-~~~~~~~~~~~~p~gl~~d-~~~~-~ly~~d~~~~~I~~~~~~g~~~-   78 (232)
                      .+++|++ .+.|. +-..++ .|...+++.. .....+...-..+.+|+.. ...+ .++.+-...+.|...|+..... 
T Consensus       270 ~sv~~s~-~~~la-sgs~Dg-tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~  346 (524)
T 2j04_B          270 TTFDFLS-PTTVV-CGFKNG-FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT  346 (524)
T ss_dssp             EEEEESS-SSEEE-EEETTS-EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH
T ss_pred             EEEEecC-CCeEE-EEeCCC-EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc
Confidence            4677876 45544 444555 7999998843 2223333334567777432 2233 6777877788999999865432 


Q ss_pred             EEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc-EEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          79 KVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR-EIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        79 ~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      ..+.. ........++.+|. +..+.+...  ...|...++..... ..+...  ....+++++++++..| .+-+..+.
T Consensus       347 ~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~--d~tv~lwd~~~~~~~~~l~gH--~~~V~sva~Sp~g~~l-~Sgs~Dgt  420 (524)
T 2j04_B          347 KTTVSRFRGSNLVPVVYCPQ-IYSYIYSDG--ASSLRAVPSRAAFAVHPLVSR--ETTITAIGVSRLHPMV-LAGSADGS  420 (524)
T ss_dssp             CEEEEECSCCSCCCEEEETT-TTEEEEECS--SSEEEEEETTCTTCCEEEEEC--SSCEEEEECCSSCCBC-EEEETTTE
T ss_pred             cccccccccCcccceEeCCC-cCeEEEeCC--CCcEEEEECcccccceeeecC--CCceEEEEeCCCCCeE-EEEECCCE
Confidence            23322 12223567999984 444555433  34577777655433 333332  4577899999975544 44455666


Q ss_pred             EEEEecC
Q psy5751         157 LECMTIR  163 (232)
Q Consensus       157 i~~~~~~  163 (232)
                      |...++.
T Consensus       421 v~lwd~~  427 (524)
T 2j04_B          421 LIITNAA  427 (524)
T ss_dssp             EECCBSC
T ss_pred             EEEEech
Confidence            6666554

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=92.38  E-value=4.9  Score=34.62  Aligned_cols=155  Identities=10%  Similarity=-0.023  Sum_probs=81.8

Q ss_pred             CCEEEEEEcCCCCcEEEEEc--CCCceeEEEeCCC----------CCccEEEEeecCCe----EEEEeCCCCeEEEEeCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHL--DGKNVEDVITTNI----------RSPEGLTFDWVNRV----LYWTDSQMDTISMANLN   74 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~--~g~~~~~~~~~~~----------~~p~gl~~d~~~~~----ly~~d~~~~~I~~~~~~   74 (232)
                      ++.||++...++ .|+.++.  +|....+.-....          ....++++.+.++.    ||+... .++++.+|..
T Consensus        62 ~g~vyv~~~~~~-~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlDa~  139 (599)
T 1w6s_A           62 DGKMYIHTSFPN-NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALNAE  139 (599)
T ss_dssp             TTEEEEECSTTT-CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEETT
T ss_pred             CCEEEEEeCCCC-EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEECC
Confidence            578888875344 6888888  4544333322110          11246777322445    887653 4688888875


Q ss_pred             CCCCEEEEe-CCC----CCceEEEEeCCCCeEEEEEcCC---CCCcEEEEeCCCCCcEEEEEcC-CC-------------
Q psy5751          75 DDQPKVIVS-KDL----VNPRGIVVHPYYRKLFWSDWNR---SGPKIEWSNLDGTDREIFLKAA-DL-------------  132 (232)
Q Consensus        75 g~~~~~~~~-~~~----~~p~~iavd~~~~~ly~~d~~~---~~~~I~~~~~~g~~~~~~~~~~-~~-------------  132 (232)
                      .....=-.. ...    ......++.  ++.+|+.....   ..+.|+.++.......--.... ..             
T Consensus       140 TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~  217 (599)
T 1w6s_A          140 TGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN  217 (599)
T ss_dssp             TCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred             CCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence            443221111 110    001122343  57777754321   1356777776544332222211 00             


Q ss_pred             --------------------CCc---ceEEEeCCCCEEEEEECC---------------CCcEEEEecCCCceEE
Q psy5751         133 --------------------KLP---NSLAVDFRTDELCWVDAD---------------SKSLECMTIRNRVRRK  169 (232)
Q Consensus       133 --------------------~~p---~~l~~d~~~~~Ly~~d~~---------------~~~i~~~~~~g~~~~~  169 (232)
                                          ..+   ..+++|+..+.+|+....               ...|..++.+.++..-
T Consensus       218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W  292 (599)
T 1w6s_A          218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKF  292 (599)
T ss_dssp             GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEE
T ss_pred             ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceee
Confidence                                000   246899988999998543               2479999998766543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=92.34  E-value=3.1  Score=32.12  Aligned_cols=197  Identities=7%  Similarity=-0.081  Sum_probs=102.3

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCCCC-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDDQP-   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~-   78 (232)
                      .+++|++..+.|. +-..++ .|...++......  ..+......+..+++.+. .+.+..+-...+.|...++..... 
T Consensus        17 ~~v~~s~~g~~la-sgs~D~-~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~   94 (316)
T 3bg1_A           17 HDAQMDYYGTRLA-TCSSDR-SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE   94 (316)
T ss_dssp             EEEEECGGGCEEE-EEETTT-EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred             EEeeEcCCCCEEE-EEeCCC-eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence            4788888555554 444455 6888887654321  223333456778888542 234445666668899988876432 


Q ss_pred             E-EEEeCCCCCceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc--CCCCCcceEEEeCCC----------
Q psy5751          79 K-VIVSKDLVNPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKA--ADLKLPNSLAVDFRT----------  144 (232)
Q Consensus        79 ~-~~~~~~~~~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~--~~~~~p~~l~~d~~~----------  144 (232)
                      . ..+.........++++|.. +.++.+-..  .+.|...++...........  ......+.+++++..          
T Consensus        95 ~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~--D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~  172 (316)
T 3bg1_A           95 KSHEHAGHDSSVNSVCWAPHDYGLILACGSS--DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPS  172 (316)
T ss_dssp             EEEEECCCSSCCCEEEECCTTTCSCEEEECS--SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred             EEEEccCCCCceEEEEECCCCCCcEEEEEcC--CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccc
Confidence            2 2233445567899999852 444444432  34566666654422111111  111233456666541          


Q ss_pred             ------CEEEEEECCCCcEEEEecCCCce-EEEec---CCCceEEEEEE-C----CEEEEEeCCCCcEEEEeCC
Q psy5751         145 ------DELCWVDADSKSLECMTIRNRVR-RKVYS---NCTYPFGLSIT-D----EKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       145 ------~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~---~~~~p~gla~~-~----~~ly~td~~~~~i~~~~~~  203 (232)
                            +.++.+-...+.|...+++.... +.+..   ......++++. .    +.+..+-...+.|...+..
T Consensus       173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~  246 (316)
T 3bg1_A          173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD  246 (316)
T ss_dssp             SCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred             ccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence                  23444444455555555553321 22211   22334567763 2    1455555556777777655

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=91.04  E-value=5.2  Score=32.17  Aligned_cols=217  Identities=6%  Similarity=-0.013  Sum_probs=123.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE-E
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK-V   80 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~   80 (232)
                      ..+++|.+.++.|..+. .++ .|...++..................+  .+.... ..+....+.+...+....... .
T Consensus       150 V~sv~fspdg~~lasgs-~Dg-~v~iWd~~~~~~~~~~~~h~~~v~~~--s~~~~~-l~sgs~d~~i~~~d~~~~~~~~~  224 (420)
T 4gga_A          150 ISSVAWIKEGNYLAVGT-SSA-EVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYI-LSSGSRSGHIHHHDVRVAEHHVA  224 (420)
T ss_dssp             EEEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEE--EEETTE-EEEEETTSEEEEEETTSSSCEEE
T ss_pred             EEEEEECCCCCEEEEEE-CCC-eEEEEEcCCCcEEEEEeCCCCceEEE--eeCCCE-EEEEeCCCceeEeeecccceeeE
Confidence            35788988666655444 444 68888887655433333322334444  443444 445556678888887765543 3


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCc---EEEEEcCCCCCcceEEEeCCCCEEEEEEC--CCC
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDR---EIFLKAADLKLPNSLAVDFRTDELCWVDA--DSK  155 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~---~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~--~~~  155 (232)
                      .+.........+...+.+..+.....   .+.+...+......   ..............+++.+....++.+-.  ..+
T Consensus       225 ~~~~h~~~~~~~~~~~~g~~l~s~~~---D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~  301 (420)
T 4gga_A          225 TLSGHSQEVCGLRWAPDGRHLASGGN---DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR  301 (420)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC
T ss_pred             EecccccceeeeeecCCCCeeeeeec---cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC
Confidence            34456667788889885555544443   34566666543321   11111111344578888887666665533  356


Q ss_pred             cEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC-CCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         156 SLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW-KTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       156 ~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~-~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      .|...++..+..............+++.  .+.++.+.. ..+.|...+.. +.....+   ..+......|++-+++
T Consensus       302 ~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l---~gH~~~V~~l~~spdg  376 (420)
T 4gga_A          302 HIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL---KGHTSRVLSLTMSPDG  376 (420)
T ss_dssp             EEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE---CCCSSCEEEEEECTTS
T ss_pred             EEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE---cCCCCCEEEEEEcCCC
Confidence            7888888866554444444455666663  556666643 45778888765 3333333   2334456677765543

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=89.76  E-value=5.8  Score=30.71  Aligned_cols=192  Identities=8%  Similarity=-0.023  Sum_probs=101.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce--eEEE-eC-CCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC-
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV--EDVI-TT-NIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ-   77 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~-~~-~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~-   77 (232)
                      .++++++.   ++++-..++ .|...++.....  ...+ .. ....+..+++.+.++.|. +-...+.|...++.... 
T Consensus        18 ~~~~~s~~---~las~~~D~-~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s~D~~v~iw~~~~~~~   92 (330)
T 2hes_X           18 WSFDFSQG---ILATGSTDR-KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGSFDSTVSIWAKEESAD   92 (330)
T ss_dssp             EEEEEETT---EEEEEESSS-CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEETTSCEEEEEC-----
T ss_pred             eeeccCCC---EEEEEcCCC-EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEeCCCcEEEEEcccCcC
Confidence            36777763   444444455 788888875322  2223 12 334678899988655554 55556788888875321 


Q ss_pred             ------CEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC--CCcEEEE-EcCCCCCcceEEEeCCCCEEE
Q psy5751          78 ------PKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG--TDREIFL-KAADLKLPNSLAVDFRTDELC  148 (232)
Q Consensus        78 ------~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g--~~~~~~~-~~~~~~~p~~l~~d~~~~~Ly  148 (232)
                            ....+.........++++|.+..|.-+..   .+.|...+++.  ...+.+. ....-.....+++++++..|.
T Consensus        93 ~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~---D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~  169 (330)
T 2hes_X           93 RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR---DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLA  169 (330)
T ss_dssp             --CCCEEEEEEC----CEEEEEECTTSCEEEEEET---TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred             ccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC---CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEE
Confidence                  11223345556789999985555544443   34577777732  2222221 111134567899999855554


Q ss_pred             EEECCCCcEEEEecCCCce---EEEecCCCceEEEEEEC---CEEEEEeCCCCcEEEEeCC
Q psy5751         149 WVDADSKSLECMTIRNRVR---RKVYSNCTYPFGLSITD---EKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       149 ~~d~~~~~i~~~~~~g~~~---~~~~~~~~~p~gla~~~---~~ly~td~~~~~i~~~~~~  203 (232)
                       +-...+.|...+......   ..+.........+++..   +....+-...+.|...+..
T Consensus       170 -s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~  229 (330)
T 2hes_X          170 -SSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM  229 (330)
T ss_dssp             -EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred             -EEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence             445566666665554322   22222333455677742   3444454445556555543

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=89.38  E-value=10  Score=33.02  Aligned_cols=151  Identities=11%  Similarity=-0.003  Sum_probs=80.9

Q ss_pred             CCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751          11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      ++.||++... + .|+.++.. |....+.-....          ....+++++  ++.||+.. ..++++.+|.......
T Consensus        66 ~g~vyv~~~~-~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~-~dg~l~alD~~tG~~~  140 (668)
T 1kv9_A           66 DGVIYTSMSW-S-RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGT-LDGRLIALDAKTGKAI  140 (668)
T ss_dssp             TTEEEEEEGG-G-EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEEC-TTSEEEEEETTTCCEE
T ss_pred             CCEEEEECCC-C-eEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEc-CCCEEEEEECCCCCEe
Confidence            5778887643 3 57777765 433333211100          012456776  57888775 3478888887544322


Q ss_pred             EEEeCC-----CCCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEEEEEcCCCCCc----------------
Q psy5751          80 VIVSKD-----LVNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREIFLKAADLKLP----------------  135 (232)
Q Consensus        80 ~~~~~~-----~~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~~~~~~~~~~p----------------  135 (232)
                      =-....     .......++.  ++.+|+...+.+   .+.|+.++.......--.... -..|                
T Consensus       141 W~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~  217 (668)
T 1kv9_A          141 WSQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV-PGDPALPYEHPELREAAKTW  217 (668)
T ss_dssp             EEEECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS-CCCTTSCCSSHHHHHHHTTC
T ss_pred             eeeccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc-CCCCCccccccccccccccC
Confidence            111110     1111122344  678887654311   356777777544332222210 0001                


Q ss_pred             ---------------ceEEEeCCCCEEEEEECCC------------------CcEEEEecCCCceEE
Q psy5751         136 ---------------NSLAVDFRTDELCWVDADS------------------KSLECMTIRNRVRRK  169 (232)
Q Consensus       136 ---------------~~l~~d~~~~~Ly~~d~~~------------------~~i~~~~~~g~~~~~  169 (232)
                                     ..+++|+..+.+|+.....                  ..|..++.+.++..-
T Consensus       218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W  284 (668)
T 1kv9_A          218 QGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW  284 (668)
T ss_dssp             CSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE
T ss_pred             CccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceee
Confidence                           2479999889999885321                  258999988766543

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=89.03  E-value=7  Score=30.67  Aligned_cols=206  Identities=7%  Similarity=-0.021  Sum_probs=110.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++....|..+.  .+ .+...+++...  .+..........+++....+.+.++....+.|...|.........+
T Consensus        23 ~~v~fs~dg~~la~g~--~~-~~~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~   97 (355)
T 3vu4_A           23 TDYEFNQDQSCLILST--LK-SFEIYNVHPVA--HIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI   97 (355)
T ss_dssp             CEEEECTTSSEEEEEC--SS-EEEEEEETTEE--EEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred             EEEEECCCCCEEEEEc--CC-EEEEEecCCcc--eeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence            3688988666554433  23 45556655332  2222222345667777666777666666678888887655443333


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC-CcEEEEEcCCCCCcce-EEEeCCCCEEEEE-ECCCCcEEE
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT-DREIFLKAADLKLPNS-LAVDFRTDELCWV-DADSKSLEC  159 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~-~~~~~~~~~~~~~p~~-l~~d~~~~~Ly~~-d~~~~~i~~  159 (232)
                      . ......++++++  ..++.+.    ..+|...++... .....     +..|.+ +++.+  ..|.++ -...+.|..
T Consensus        98 ~-~~~~v~~v~~~~--~~~~~~~----~~~i~i~d~~~~~~~~~~-----~~~~~~~~~~s~--~~la~~sg~~~g~v~i  163 (355)
T 3vu4_A           98 K-VDAPVKDLFLSR--EFIVVSY----GDVISVFKFGNPWKRITD-----DIRFGGVCEFSN--GLLVYSNEFNLGQIHI  163 (355)
T ss_dssp             E-CSSCEEEEEECS--SEEEEEE----TTEEEEEESSTTCCBSSC-----CEEEEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred             E-CCCceEEEEEcC--CEEEEEE----cCEEEEEECCCCceeeEE-----eccCCceEEEEc--cEEEEeCCCcCcEEEE
Confidence            3 333567777774  4555554    235777777654 11000     111333 34444  455554 455677777


Q ss_pred             EecCCCc-----------------eEEEecCCCceEEEEEE-CCEEEEEeCCCCc-EEEEeCC-CCCcceEEeccCCcce
Q psy5751         160 MTIRNRV-----------------RRKVYSNCTYPFGLSIT-DEKYYWTDWKTNR-IESANKE-GERAPSIALDMMGTTY  219 (232)
Q Consensus       160 ~~~~g~~-----------------~~~~~~~~~~p~gla~~-~~~ly~td~~~~~-i~~~~~~-g~~~~~i~~~~~~~~~  219 (232)
                      .+++...                 ...+.........+++. ++.+..+-...+. |...+.. +.....+.. ..+...
T Consensus       164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~-g~h~~~  242 (355)
T 3vu4_A          164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR-GLDRAD  242 (355)
T ss_dssp             EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC-TTCCSC
T ss_pred             EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-CCCCCc
Confidence            7777543                 23333334445678874 5556666666676 8777776 444333321 113445


Q ss_pred             eEEEEEEcC
Q psy5751         220 MYGIAAVPS  228 (232)
Q Consensus       220 p~gi~~~~~  228 (232)
                      ...+++-++
T Consensus       243 v~~~~~s~~  251 (355)
T 3vu4_A          243 VVDMKWSTD  251 (355)
T ss_dssp             EEEEEECTT
T ss_pred             EEEEEECCC
Confidence            566665443

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=88.45  E-value=8.4  Score=30.82  Aligned_cols=211  Identities=14%  Similarity=0.086  Sum_probs=112.0

Q ss_pred             EEEEeCC--CCEEEEEEcCCCCcEEEEEcCCCceeEEEe----C--------------CCCCccEEEEeec-CCeEEEEe
Q psy5751           4 GITVDCV--EGQVYYSSVADKSSIKRAHLDGKNVEDVIT----T--------------NIRSPEGLTFDWV-NRVLYWTD   62 (232)
Q Consensus         4 ~i~~d~~--~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~----~--------------~~~~p~gl~~d~~-~~~ly~~d   62 (232)
                      ++++++.  .+.||..-.. . .|++..-.|...+.+..    +              .......|++|+. .+.||+..
T Consensus       119 ~l~~~~~~~~~~l~~g~~~-g-gl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~  196 (394)
T 3b7f_A          119 WLTPGHASEPGTWYAGTSP-Q-GLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGM  196 (394)
T ss_dssp             EEEECCTTSTTCEEEEEET-T-EEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEE
T ss_pred             EEEeCCCCCCCEEEEEecC-C-cEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEE
Confidence            5777763  5777775432 3 58876555555433321    0              0112357888863 46788775


Q ss_pred             CCCCeEEEEeCCCCCCEEEEeC--C----------CCCceEEEEeCCC-CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc
Q psy5751          63 SQMDTISMANLNDDQPKVIVSK--D----------LVNPRGIVVHPYY-RKLFWSDWNRSGPKIEWSNLDGTDREIFLKA  129 (232)
Q Consensus        63 ~~~~~I~~~~~~g~~~~~~~~~--~----------~~~p~~iavd~~~-~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~  129 (232)
                      .. +.|++.+-.|..-+.+...  .          ......|++++.+ +.||+...    ..|++..-.|..-+.+ ..
T Consensus       197 ~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~----~gl~~s~D~G~tW~~~-~~  270 (394)
T 3b7f_A          197 SS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH----CGIYRMDRREGVWKRI-GD  270 (394)
T ss_dssp             ET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET----TEEEEEETTTTEEECG-GG
T ss_pred             CC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC----CeEEEeCCCCCcceEC-CC
Confidence            43 3577765555443332210  0          1235788999853 78887653    3377776555432222 11


Q ss_pred             CCCC-----CcceEEEeCC-CCEEEEEEC------------CCCcEEEEecCCCceEEEecCCCce--------EEEEEE
Q psy5751         130 ADLK-----LPNSLAVDFR-TDELCWVDA------------DSKSLECMTIRNRVRRKVYSNCTYP--------FGLSIT  183 (232)
Q Consensus       130 ~~~~-----~p~~l~~d~~-~~~Ly~~d~------------~~~~i~~~~~~g~~~~~~~~~~~~p--------~gla~~  183 (232)
                      . +.     ....|++++. .+.||+.-.            ....|++..-.|..-+.+...++.+        .+++++
T Consensus       271 ~-l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~  349 (394)
T 3b7f_A          271 A-MPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTAD  349 (394)
T ss_dssp             G-SCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEEC
T ss_pred             C-CCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEEC
Confidence            1 21     2245778763 467887631            1235666533333334443333321        246664


Q ss_pred             ---CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751         184 ---DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       184 ---~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                         .+.||+.- ..+.|++-.-.|...+.+..   ++...+.|++..
T Consensus       350 p~~~~~l~~g~-~~g~l~~S~D~G~tW~~~~~---~lp~~~~v~~~~  392 (394)
T 3b7f_A          350 AHAPVGVYFGT-TGGEIWASADEGEHWQCIAS---HLPHIYAVQSAR  392 (394)
T ss_dssp             CSSSCCEEEEC-TTSCEEEESSTTSBCEEEEC---SCSCEEEEEEEC
T ss_pred             CCCCCEEEEEe-CCCeEEEECCCCCCceEccc---CCCCeeEEEEec
Confidence               25677753 34557766656777776653   233455666654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=88.15  E-value=8.7  Score=30.63  Aligned_cols=73  Identities=12%  Similarity=-0.046  Sum_probs=47.3

Q ss_pred             EEEEeC-------CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           4 GITVDC-------VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         4 ~i~~d~-------~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      +++|.+       .++.+..+--.++ .|...++............-..+.++++.+.+..+..+-...+.|...|+...
T Consensus       141 ~v~~~p~~~~~~~~d~~~las~s~D~-tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~  219 (393)
T 4gq1_A          141 DIDIADVYSADNRLAEQVIASVGDDC-TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN  219 (393)
T ss_dssp             EEEEEEEECTTCSEEEEEEEEEETTS-EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred             EEEEccccccccCCCCCEEEEEECCC-eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence            566654       2456666666666 88888876544322222333567888888866666667667788999887654


Q ss_pred             C
Q psy5751          77 Q   77 (232)
Q Consensus        77 ~   77 (232)
                      .
T Consensus       220 ~  220 (393)
T 4gq1_A          220 L  220 (393)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=87.83  E-value=8.5  Score=30.18  Aligned_cols=182  Identities=10%  Similarity=0.021  Sum_probs=102.0

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC-CC-EEEE
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-QP-KVIV   82 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~-~~-~~~~   82 (232)
                      +++.+..+.+.++...++ .|...+.........+.. ...+.++++..  +.++++.  .+.|...++... .. ..+.
T Consensus        64 ~~~~~~~~~~~~~~~~d~-~v~iWd~~~~~~~~~~~~-~~~v~~v~~~~--~~~~~~~--~~~i~i~d~~~~~~~~~~~~  137 (355)
T 3vu4_A           64 VRMLHRTNYVAFVTGVKE-VVHIWDDVKKQDVSRIKV-DAPVKDLFLSR--EFIVVSY--GDVISVFKFGNPWKRITDDI  137 (355)
T ss_dssp             EEECTTSSEEEEECSSTT-EEEEEETTTTEEEEEEEC-SSCEEEEEECS--SEEEEEE--TTEEEEEESSTTCCBSSCCE
T ss_pred             EEEcCCCCEEEEEECCcc-EEEEEECCCCcEEEEEEC-CCceEEEEEcC--CEEEEEE--cCEEEEEECCCCceeeEEec
Confidence            445555666666655556 788888765443222222 23556666663  4555553  357888888765 21 1111


Q ss_pred             eCCCCCceEE-EEeCCCCeEEEEEcCCCCCcEEEEeCCCCC-----------------cEEEEEcCCCCCcceEEEeCCC
Q psy5751          83 SKDLVNPRGI-VVHPYYRKLFWSDWNRSGPKIEWSNLDGTD-----------------REIFLKAADLKLPNSLAVDFRT  144 (232)
Q Consensus        83 ~~~~~~p~~i-avd~~~~~ly~~d~~~~~~~I~~~~~~g~~-----------------~~~~~~~~~~~~p~~l~~d~~~  144 (232)
                      .     |.++ ++.+  +.+.++... ..+.|...++....                 ...+ . ..-.....+++++++
T Consensus       138 ~-----~~~~~~~s~--~~la~~sg~-~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~-~h~~~v~~~~~s~~g  207 (355)
T 3vu4_A          138 R-----FGGVCEFSN--GLLVYSNEF-NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-K-AHTNPIKMVRLNRKS  207 (355)
T ss_dssp             E-----EEEEEEEET--TEEEEEESS-CTTCEEEEECCC------------------CCEEE-C-CCSSCEEEEEECTTS
T ss_pred             c-----CCceEEEEc--cEEEEeCCC-cCcEEEEEECCCCCccccccccccccccCcccEEE-E-ccCCceEEEEECCCC
Confidence            1     4433 3443  455444222 24567777776533                 2222 1 114567899999975


Q ss_pred             CEEEEEECCCCc-EEEEecCCCce-EEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         145 DELCWVDADSKS-LECMTIRNRVR-RKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       145 ~~Ly~~d~~~~~-i~~~~~~g~~~-~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..| .+-+..+. |...++..... ..+..  ......++++. ++.+..+-...+.|...+..
T Consensus       208 ~~l-~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~  270 (355)
T 3vu4_A          208 DMV-ATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF  270 (355)
T ss_dssp             SEE-EEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred             CEE-EEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence            555 45456776 88888885544 33431  34445688885 45555555556777777765

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=87.14  E-value=10  Score=30.26  Aligned_cols=158  Identities=10%  Similarity=-0.054  Sum_probs=80.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee-EEE------------------------eCCCCCccEEEEeecCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE-DVI------------------------TTNIRSPEGLTFDWVNR   56 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~-~~~------------------------~~~~~~p~gl~~d~~~~   56 (232)
                      +.+++|++.+..++++-..++ .|...++...... ...                        .........+++....+
T Consensus       189 v~~v~~~p~~~~~l~~~~~d~-~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg  267 (393)
T 4gq1_A          189 GISVQFRPSNPNQLIVGERNG-NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG  267 (393)
T ss_dssp             EEEEEEETTEEEEEEEEETTS-EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTT
T ss_pred             cEEEEECCCCCceEEecCCCC-EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCC
Confidence            458899987666666665666 7888887643211 100                        01112344555553333


Q ss_pred             eEEEEeCCCCeEEEEeCCCCCCEEEEe------------------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeC
Q psy5751          57 VLYWTDSQMDTISMANLNDDQPKVIVS------------------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL  118 (232)
Q Consensus        57 ~ly~~d~~~~~I~~~~~~g~~~~~~~~------------------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~  118 (232)
                      ....+-...+.+...++........+.                  .......+....+..+.+|.+... ..+.|+..+.
T Consensus       268 ~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs-~Dg~V~lwd~  346 (393)
T 4gq1_A          268 SGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS-QHGLIQLINT  346 (393)
T ss_dssp             CEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET-TTTEEEEEET
T ss_pred             CEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC-CCCEEEEEEC
Confidence            444455566777777765433211110                  011122233344445555555433 2567888887


Q ss_pred             CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC
Q psy5751         119 DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN  164 (232)
Q Consensus       119 ~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g  164 (232)
                      ............ -.....+++++++..|-.+.  .+.+..+++.|
T Consensus       347 ~~~~~~~~~~~~-~~~V~svafspdG~~LA~as--~~Gv~lvrL~g  389 (393)
T 4gq1_A          347 YEKDSNSIPIQL-GMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG  389 (393)
T ss_dssp             TCTTCCEEEEEC-SSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred             CCCcEEEEecCC-CCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence            655433333322 34568999999977775553  34455554443

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=85.03  E-value=11  Score=28.84  Aligned_cols=198  Identities=10%  Similarity=-0.027  Sum_probs=98.8

Q ss_pred             EEEEEeCC-CCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecC-CeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           3 IGITVDCV-EGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVN-RVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         3 ~~i~~d~~-~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      .+++|.+. ++.++++-..++ .|...++.....+  ..+......+.++++.+.. +.++.+-...+.|...++.+...
T Consensus        61 ~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~  139 (316)
T 3bg1_A           61 WQVAWAHPMYGNILASCSYDR-KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ  139 (316)
T ss_dssp             EEEEECCGGGSSCEEEEETTS-CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred             EEEEeCCCCCCCEEEEEECCC-EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence            35666542 233344444445 6777777653221  2222234567889998752 44555666678888888766432


Q ss_pred             EEEE---eCCCCCceEEEEeCCC----------------CeEEEEEcCCCCCcEEEEeCCCCCc-EEEEE-cCCCCCcce
Q psy5751          79 KVIV---SKDLVNPRGIVVHPYY----------------RKLFWSDWNRSGPKIEWSNLDGTDR-EIFLK-AADLKLPNS  137 (232)
Q Consensus        79 ~~~~---~~~~~~p~~iavd~~~----------------~~ly~~d~~~~~~~I~~~~~~g~~~-~~~~~-~~~~~~p~~  137 (232)
                      ....   .........++.+|..                +.++.+-..  .+.|...++..... ..+.. ...-....+
T Consensus       140 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~--D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~  217 (316)
T 3bg1_A          140 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC--DNLIKLWKEEEDGQWKEEQKLEAHSDWVRD  217 (316)
T ss_dssp             EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBT--TSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred             cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecC--CCeEEEEEeCCCCccceeeecccCCCceEE
Confidence            2111   1122233455555431                233333322  33444444443321 12111 111234678


Q ss_pred             EEEeCCC---CEEEEEECCCCcEEEEecCCCc-----eEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         138 LAVDFRT---DELCWVDADSKSLECMTIRNRV-----RRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       138 l~~d~~~---~~Ly~~d~~~~~i~~~~~~g~~-----~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++++..   +.+..+-+..+.|...+++...     .+.+.........+++. .+.+..+-...+.|...+..
T Consensus       218 v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          218 VAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             EECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             EEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            8998864   2445555667777777776421     12232233445677774 44444444445555555543

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=83.82  E-value=12  Score=28.15  Aligned_cols=154  Identities=10%  Similarity=-0.003  Sum_probs=92.6

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC----EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP----KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLD  119 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~  119 (232)
                      .....+++...++.| ++-...+.|...++.....    .............++..+..+.+.....+.....|...+..
T Consensus       151 ~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~  229 (318)
T 4ggc_A          151 QEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC  229 (318)
T ss_dssp             SCEEEEEECTTSSEE-EEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred             CceEEEEEcCCCCEE-EEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence            455666666655544 4555567788888754321    12222344455778888877777665544445667777777


Q ss_pred             CCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC-CCCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEEeCCCCc
Q psy5751         120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDA-DSKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWTDWKTNR  196 (232)
Q Consensus       120 g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~-~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~td~~~~~  196 (232)
                      ..........  ......+.+.+..+.++.+-. ..+.|...+++.......+. ......++++. ++.+.+|-...+.
T Consensus       230 ~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~  307 (318)
T 4ggc_A          230 SGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET  307 (318)
T ss_dssp             TCCEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred             cccccccccc--eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence            6655544443  456788899998888877653 46788888887654433332 33445677774 4444455444455


Q ss_pred             EEEE
Q psy5751         197 IESA  200 (232)
Q Consensus       197 i~~~  200 (232)
                      |..-
T Consensus       308 v~iW  311 (318)
T 4ggc_A          308 LRLW  311 (318)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5443

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=83.46  E-value=16  Score=29.27  Aligned_cols=177  Identities=9%  Similarity=0.000  Sum_probs=108.5

Q ss_pred             cEEEEEcCCCce-eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC----EEEEeCCCCCceEEEEeCCC
Q psy5751          24 SIKRAHLDGKNV-EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP----KVIVSKDLVNPRGIVVHPYY   98 (232)
Q Consensus        24 ~i~~~~~~g~~~-~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~~~~~p~~iavd~~~   98 (232)
                      .+...+...... ...+........++...+.++.+. +....+.+...+......    .............++..|..
T Consensus       210 ~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~-s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~  288 (420)
T 4gga_A          210 HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA-SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ  288 (420)
T ss_dssp             EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTC
T ss_pred             ceeEeeecccceeeEEecccccceeeeeecCCCCeee-eeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCc
Confidence            455555553222 122333445667777777555554 555557788877654321    12222344566789999888


Q ss_pred             CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC-CCCcEEEEecCCCce-EEEecCCCc
Q psy5751          99 RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA-DSKSLECMTIRNRVR-RKVYSNCTY  176 (232)
Q Consensus        99 ~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~-~~~~i~~~~~~g~~~-~~~~~~~~~  176 (232)
                      +.++.+..+...+.|...++........+..  ......+.+.+.++.|+.+-. ..+.|...+++.... ..+......
T Consensus       289 ~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~  366 (420)
T 4gga_A          289 SNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR  366 (420)
T ss_dssp             TTEEEEEECTTTCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC
T ss_pred             ccEEEEEeecCCCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC
Confidence            8777765544456788888876554444443  457788999999888887754 467888888876544 333223444


Q ss_pred             eEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         177 PFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       177 p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..++++. ++...+|-...+.|..-+..
T Consensus       367 V~~l~~spdg~~l~S~s~D~tvriWdv~  394 (420)
T 4gga_A          367 VLSLTMSPDGATVASAAADETLRLWRCF  394 (420)
T ss_dssp             EEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred             EEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence            5688884 55556665556666655544

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=83.32  E-value=23  Score=30.99  Aligned_cols=150  Identities=10%  Similarity=-0.004  Sum_probs=79.8

Q ss_pred             CCEEEEEEcCCCCcEEEEEcC-CCceeEEEeCCC----------CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751          11 EGQVYYSSVADKSSIKRAHLD-GKNVEDVITTNI----------RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~-g~~~~~~~~~~~----------~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      ++.||++... + .|+.++.. |....+.-....          ....+++++  ++.||+... .++++.+|.......
T Consensus        70 ~g~vyv~~~~-~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~v~v~~~-dg~l~AlDa~TG~~~  144 (689)
T 1yiq_A           70 DGVMYTTGPF-S-VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW--KGKVYVGVL-DGRLEAIDAKTGQRA  144 (689)
T ss_dssp             TTEEEEECGG-G-CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEE
T ss_pred             CCEEEEEcCC-C-eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE--CCEEEEEcc-CCEEEEEECCCCCEe
Confidence            6788887643 3 58888875 443333211110          012356666  678887753 468888887544322


Q ss_pred             EEEeCC------CCCceEEEEeCCCCeEEEEEcCC---CCCcEEEEeCCCCCcEEEEEcCCCCCc---------------
Q psy5751          80 VIVSKD------LVNPRGIVVHPYYRKLFWSDWNR---SGPKIEWSNLDGTDREIFLKAADLKLP---------------  135 (232)
Q Consensus        80 ~~~~~~------~~~p~~iavd~~~~~ly~~d~~~---~~~~I~~~~~~g~~~~~~~~~~~~~~p---------------  135 (232)
                      =-....      .......++.  ++.+|+...+.   ..+.|+..+.......--.... -..|               
T Consensus       145 W~~~~~~~~~~~~~~~~sP~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~  221 (689)
T 1yiq_A          145 WSVDTRADHKRSYTITGAPRVV--NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTV-PGDPKLPPEGKGMEIAAKT  221 (689)
T ss_dssp             EEEECCSCTTSCCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS-CCCTTSCCCSHHHHHHHTT
T ss_pred             eeecCcCCCCCCccccCCcEEE--CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEeccc-CCCcccccccccccccccc
Confidence            111111      0111122343  67787764321   1456777776544332222210 0000               


Q ss_pred             ----------------ceEEEeCCCCEEEEEECCC------------------CcEEEEecCCCceE
Q psy5751         136 ----------------NSLAVDFRTDELCWVDADS------------------KSLECMTIRNRVRR  168 (232)
Q Consensus       136 ----------------~~l~~d~~~~~Ly~~d~~~------------------~~i~~~~~~g~~~~  168 (232)
                                      ..+++|+..+.+|+.....                  ..|..++.+.++..
T Consensus       222 ~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~  288 (689)
T 1yiq_A          222 WFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV  288 (689)
T ss_dssp             CCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE
T ss_pred             cCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee
Confidence                            2578999889999875431                  24999999866554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=81.38  E-value=20  Score=29.00  Aligned_cols=159  Identities=10%  Similarity=-0.001  Sum_probs=89.2

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc---------eeE-EEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeC
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKN---------VED-VITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL   73 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~---------~~~-~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~   73 (232)
                      .+++.+..+.++.+...   .+...+++...         .+. ... .+..+..|++  .++.|+++  ..+.|.++++
T Consensus        42 lLais~~~gll~a~~~~---~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~V~~l~f--d~~~L~v~--~~~~l~v~dv  113 (388)
T 1xip_A           42 NLDISNSKSLFVAASGS---KAVVGELQLLRDHITSDSTPLTFKWEK-EIPDVIFVCF--HGDQVLVS--TRNALYSLDL  113 (388)
T ss_dssp             CEEEETTTTEEEEEETT---EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTTEEEEEE--ETTEEEEE--ESSEEEEEES
T ss_pred             EEEEcCCCCEEEEeCCC---EEEEEEhhHhhhhhccccccccceEEe-eCCCeeEEEE--CCCEEEEE--cCCcEEEEEc
Confidence            46777777777766654   45555544211         111 111 2334899999  47889988  4468999998


Q ss_pred             CCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC
Q psy5751          74 NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD  153 (232)
Q Consensus        74 ~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~  153 (232)
                      ............-....++..-  ...+.....   .+.++..++.......+     .....+++.++.+  +++. ..
T Consensus       114 ~sl~~~~~~~~~~~~v~~i~~~--~p~~av~~~---dG~L~v~dl~~~~~~~~-----~~~Vs~v~WSpkG--~~vg-~~  180 (388)
T 1xip_A          114 EELSEFRTVTSFEKPVFQLKNV--NNTLVILNS---VNDLSALDLRTKSTKQL-----AQNVTSFDVTNSQ--LAVL-LK  180 (388)
T ss_dssp             SSTTCEEEEEECSSCEEEEEEC--SSEEEEEET---TSEEEEEETTTCCEEEE-----EESEEEEEECSSE--EEEE-ET
T ss_pred             hhhhccCccceeecceeeEEec--CCCEEEEEC---CCCEEEEEccCCccccc-----cCCceEEEEcCCc--eEEE-Ec
Confidence            7766443222111123333322  223333332   35577777764443332     2357789999974  4444 44


Q ss_pred             CCcEEEEecCCCc---eEEE------ec---CCCceEEEEEE
Q psy5751         154 SKSLECMTIRNRV---RRKV------YS---NCTYPFGLSIT  183 (232)
Q Consensus       154 ~~~i~~~~~~g~~---~~~~------~~---~~~~p~gla~~  183 (232)
                      ++.+..+.+++..   ..++      .+   .-.++.+|.+-
T Consensus       181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl  222 (388)
T 1xip_A          181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTIL  222 (388)
T ss_dssp             TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEES
T ss_pred             CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEe
Confidence            6778888888876   3344      11   23456677775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	232
d1npea_	263	b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId	6e-48
d1npea_	263	b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId	3e-21
d1ijqa1	266	b.68.5.1 (A:377-642) Low density lipoprotein (LDL)	4e-35
d1ijqa1	266	b.68.5.1 (A:377-642) Low density lipoprotein (LDL)	2e-24
d2dg1a1	319	b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus	0.003

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} Length = 263

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  156 bits (396), Expect = 6e-48
 Identities = 88/228 (38%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTD 62
           IG+  DCV+  VY++ +++ S I RA L G     +I  ++ SPEG+  D + R ++WTD
Sbjct: 39  IGLAFDCVDKVVYWTDISEPS-IGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTD 97

Query: 63  SQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD 122
           SQ+D I +A ++  Q +V+    LVNPRGIV  P    L+W+DWNR  PKIE S++DGT+
Sbjct: 98  SQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157

Query: 123 REIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSI 182
           R I  +     LPN L  D  + +LCWVDA +   EC+      RRKV     YPF ++ 
Sbjct: 158 RRILAQDNL-GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS 216

Query: 183 TDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSC 230
             +  Y+TDWKTN + + +    +           T +YGI    S C
Sbjct: 217 YGKNLYYTDWKTNSVIAMDLAISKEMDT-FHPHKQTRLYGITIALSQC 263

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} Length = 263

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.2 bits (215), Expect = 3e-21
 Identities = 49/216 (22%), Positives = 87/216 (40%), Gaps = 16/216 (7%)

Query: 19  VADKSSIKRAHLDGKNVEDV-----ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANL 73
            A    I+R  L+   ++       +    +   GL FD V++V+YWTD    +I  A+L
Sbjct: 6   FAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASL 65

Query: 74  NDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLK 133
           +  +P  I+ +DL +P GI +    R +FW+D       IE + +DGT R +        
Sbjct: 66  HGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDR--IEVAKMDGTQRRVLFDTGL-V 122

Query: 134 LPNSLAVDFRTDELCWVDADSKSLE-CMTIRNRVRRKVYSNCTYPFGLSIT----DEKYY 188
            P  +  D     L W D +  + +   +  +   R++ +         +T      +  
Sbjct: 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLC 182

Query: 189 WTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIA 224
           W D  T+R E  N        +   + G  Y + + 
Sbjct: 183 WVDAGTHRAECLNPAQPGRRKV---LEGLQYPFAVT 215

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 266

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 4e-35
 Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 3   IGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNRVL 58
           + +  +    ++Y+S ++ +  I    LD  +     + VI+ +I++P+GL  DW++  +
Sbjct: 33  VALDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNI 91

Query: 59  YWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNL 118
           YWTDS + T+S+A+    + K +  ++   PR IVV P +  ++W+DW  +  KI+   L
Sbjct: 92  YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGL 150

Query: 119 DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN---CT 175
           +G D    +   +++ PN + +D  +  L WVD+   S+  + +    R+ +  +     
Sbjct: 151 NGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 209

Query: 176 YPFGLSITDEKYYWTDWKTNRIESANKEG 204
           +PF L++ ++K +WTD     I SAN+  
Sbjct: 210 HPFSLAVFEDKVFWTDIINEAIFSANRLT 238

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 266

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.4 bits (236), Expect = 2e-24
 Identities = 36/214 (16%), Positives = 81/214 (37%), Gaps = 12/214 (5%)

Query: 19  VADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD-- 76
             ++  +++  LD      +I  N+R+   L  +  +  +YW+D     I    L+    
Sbjct: 6   FTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 64

Query: 77  --QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKL 134
                 ++S+D+  P G+ V   +  ++W+D       +  ++  G  R+   +  +   
Sbjct: 65  VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFR-ENGSK 121

Query: 135 PNSLAVDFRTDELCWVDADSK-SLECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWT 190
           P ++ VD     + W D  +   ++   +       + +          L +   + YW 
Sbjct: 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 181

Query: 191 DWKTNRIESANKEGERAPSIALDMMGTTYMYGIA 224
           D K + I S +  G    +I  D     + + +A
Sbjct: 182 DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA 215

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Length = 319

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

 Score = 35.4 bits (80), Expect = 0.003
 Identities = 28/225 (12%), Positives = 66/225 (29%), Gaps = 18/225 (8%)

Query: 4   GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDS 63
           G+  D  +GQ++   V + + I + + + K ++    ++  +P  +      R+      
Sbjct: 44  GLNFD-RQGQLFLLDVFEGN-IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLG 101

Query: 64  QMDTISMANLNDDQPKVIVS-----KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEW-SN 117
              +        +    +               +V        F      S   +     
Sbjct: 102 DFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYY 161

Query: 118 LDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL-------ECMTIRNRVRRKV 170
           +    R +     ++ + N +A+      L   +  +  L       + +TI+       
Sbjct: 162 VSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIP 221

Query: 171 YSNCTYPFGLSIT---DEKYYWTDWKTNRIESANKEGERAPSIAL 212
           Y    +    S     D+  Y   +   R+   NK G     I +
Sbjct: 222 YYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILI 266

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	232
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	100.0
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	100.0
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	100.0
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	100.0
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.94
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.94
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.93
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.91
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.89
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	99.89
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.84
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.84
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.82
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.82
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.71
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.53
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.51
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	99.51
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.36
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.33
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.31
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.3
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	99.11
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	99.1
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.01
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	98.92
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.82
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	98.81
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.78
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.77
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.7
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.65
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.63
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.53
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	98.49
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	98.48
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.43
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.37
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	98.33
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.33
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	98.32
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	98.27
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.13
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.1
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	98.02
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	97.99
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.97
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	97.93
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	97.93
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.79
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	97.53
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	97.46
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	97.18
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	97.16
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	97.14
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.11
d1tbga_	340	beta1-subunit of the signal-transducing G protein	96.92
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	96.71
d1tbga_	340	beta1-subunit of the signal-transducing G protein	96.54
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	96.49
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	96.32
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	96.02
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	95.72
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	95.44
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	95.36
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	95.25
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	94.31
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	93.47
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	92.95
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	92.03
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	90.85
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	90.38
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	86.07
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	81.68
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	80.47
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	80.34

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.7e-47  Score=295.63  Aligned_cols=226  Identities=39%  Similarity=0.771  Sum_probs=207.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      +++++||+.+++|||+|...+ +|+++.++|+..+.++..++..|.+||+||.+++|||+|...++|.+++++|..++++
T Consensus        38 ~~~ld~D~~~~~iywsd~~~~-~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l  116 (263)
T d1npea_          38 IIGLAFDCVDKVVYWTDISEP-SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL  116 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTT-EEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred             EEEEEEEeCCCEEEEEECCCC-eEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEE
Confidence            568999999999999999999 9999999999887888778889999999999999999999999999999999999888


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEe
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMT  161 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~  161 (232)
                      ....+..|.++++||.+|.|||++++...++|++++++|...+.++... +..|+||++|+.+++|||+|...++|.+++
T Consensus       117 ~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~-~~~P~glaiD~~~~~lYw~d~~~~~I~~~~  195 (263)
T d1npea_         117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLN  195 (263)
T ss_dssp             ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeec-ccccceEEEeecCcEEEEEeCCCCEEEEEE
Confidence            8878899999999999999999999876778999999999999888766 899999999999999999999999999999


Q ss_pred             cCCCceEEEecCCCceEEEEEECCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         162 IRNRVRRKVYSNCTYPFGLSITDEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       162 ~~g~~~~~~~~~~~~p~gla~~~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      ++|..++.+...+++|.||++++++|||||+.+++|.++++.+.....+..+.. ..+|+||+|.++||
T Consensus       196 ~~g~~~~~v~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~-~~~~~gi~v~~~~~  263 (263)
T d1npea_         196 PAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHK-QTRLYGITIALSQC  263 (263)
T ss_dssp             TTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSS-CCCCCCEEEECSCC
T ss_pred             CCCCCeEEEECCCCCcEEEEEECCEEEEEECCCCEEEEEECCCCccceEECCCC-CCCcceEEEeCCCC
Confidence            999999999899999999999999999999999999999998655554554433 44799999999999

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-42  Score=269.19  Aligned_cols=224  Identities=26%  Similarity=0.551  Sum_probs=197.4

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc----eeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN----VEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDD   76 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~----~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~   76 (232)
                      .|++++||+.+++|||+|...+ .|+++.+++..    .+.++..++..|.|||+||.+++|||+|...++|.+++++|.
T Consensus        31 ~~~~id~d~~~~~lYw~D~~~~-~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~  109 (266)
T d1ijqa1          31 NVVALDTEVASNRIYWSDLSQR-MICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  109 (266)
T ss_dssp             SEEEEEEETTTTEEEEEETTTT-EEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             ceEEEEEEeCCCEEEEEECCCC-EEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCCc
Confidence            4789999999999999999988 99999998743    445666778899999999999999999999999999999999


Q ss_pred             CCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          77 QPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        77 ~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      .+..++...+..|.++++||.+|.|||++++. .++|++++++|+..+.++... +..|+||++|+.+++|||+|...++
T Consensus       110 ~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~-~~~I~r~~~dGs~~~~l~~~~-~~~p~gl~iD~~~~~lYw~d~~~~~  187 (266)
T d1ijqa1         110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHS  187 (266)
T ss_dssp             SEEEEEECTTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             eEEEEEcCCCCCcceEEEEcccCeEEEeccCC-CcceeEeccCCCceecccccc-cceeeEEEeeccccEEEEecCCcCE
Confidence            98888888889999999999999999999874 579999999999999988766 8999999999999999999999999


Q ss_pred             EEEEecCCCceEEEec---CCCceEEEEEECCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         157 LECMTIRNRVRRKVYS---NCTYPFGLSITDEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       157 i~~~~~~g~~~~~~~~---~~~~p~gla~~~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      |++++++|..++.+..   .+..|.||++++++|||+|+.++.|.++++. |+..+.+.   .+...|++|+|+++.+
T Consensus       188 I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g~~~~~~~---~~~~~p~~i~v~~~~~  262 (266)
T d1ijqa1         188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNLT  262 (266)
T ss_dssp             EEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE---CSCSCCCCEEEESGGG
T ss_pred             EEEEECCCCCEEEEEeCCCcccccEEEEEECCEEEEEECCCCeEEEEECCCCcceEEEE---cCCCCceEEEEECCcc
Confidence            9999999998877754   5678999999999999999999999999987 45554443   4567899999999765

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-31  Score=207.19  Aligned_cols=209  Identities=18%  Similarity=0.374  Sum_probs=179.3

Q ss_pred             EEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC----CEEEEeCCCCC
Q psy5751          13 QVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ----PKVIVSKDLVN   88 (232)
Q Consensus        13 ~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~~   88 (232)
                      .|++++-.   .|+++++++.....++ +++..+.+|++|+.++.|||+|...+.|++.+++|..    .+.+....+..
T Consensus         3 fLl~s~~~---~I~~~~l~~~~~~~~~-~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~   78 (266)
T d1ijqa1           3 YLFFTNRH---EVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA   78 (266)
T ss_dssp             EEEEECBS---SEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred             EEEEECCC---eEEEEECCCCcceeee-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCC
Confidence            46777643   7999999998875664 5678999999999999999999999999999998843    45666678889


Q ss_pred             ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEEEecCCCce
Q psy5751          89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLECMTIRNRVR  167 (232)
Q Consensus        89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~~~~~g~~~  167 (232)
                      |.+||+|+.++.|||++..  .++|++.+++|.....++... +..|.+|++|+.++.|||++.+. ++|+++++||+.+
T Consensus        79 p~glAvD~~~~~lY~~d~~--~~~I~v~~~~g~~~~~~~~~~-~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~  155 (266)
T d1ijqa1          79 PDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI  155 (266)
T ss_dssp             CCEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred             cceEEEeeccceEEEEecC--CCEEEeEecCCceEEEEEcCC-CCCcceEEEEcccCeEEEeccCCCcceeEeccCCCce
Confidence            9999999999999999976  578999999999988887766 88999999999999999999765 5899999999999


Q ss_pred             EEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         168 RKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       168 ~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      +.+. +.+..|.||+++  .++|||+|...++|.+++.+|...+.+.........|+|||++++
T Consensus       156 ~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~  219 (266)
T d1ijqa1         156 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED  219 (266)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT
T ss_pred             ecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEECC
Confidence            8886 478999999997  789999999999999999999988877666666778999999864

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-31  Score=208.11  Aligned_cols=207  Identities=26%  Similarity=0.500  Sum_probs=177.6

Q ss_pred             EEEEEEcCCCCcEEEEEcCCCcee-----EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC
Q psy5751          13 QVYYSSVADKSSIKRAHLDGKNVE-----DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV   87 (232)
Q Consensus        13 ~ly~~d~~~~~~i~~~~~~g~~~~-----~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~   87 (232)
                      .|+++...   .|.++.+++....     ..+......+.+|++|+.+++|||+|...+.|++.+++|...+.++...+.
T Consensus         3 fLl~s~~~---~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~   79 (263)
T d1npea_           3 HLLFAQTG---KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (263)
T ss_dssp             EEEEEEEE---EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             EEEEeCCC---eEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccc
Confidence            46676654   7999999976422     223333456889999999999999999999999999999999998887888


Q ss_pred             CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC--CcEEEEecCCC
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS--KSLECMTIRNR  165 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~--~~i~~~~~~g~  165 (232)
                      .|.+||+|+.++.|||++..  ..+|++.+++|...+++.... +..|.+|++|+..+.|||++.+.  .+|++++++|.
T Consensus        80 ~p~~iAvD~~~~~lY~~d~~--~~~I~~~~~dg~~~~~l~~~~-l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~  156 (263)
T d1npea_          80 SPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT  156 (263)
T ss_dssp             CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred             cccEEEEeccCCeEEEeccC--CCEEEEEecCCceEEEEeccc-ccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCC
Confidence            99999999999999999976  568999999999988887765 88999999999999999999864  46999999999


Q ss_pred             ceEEEe-cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         166 VRRKVY-SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       166 ~~~~~~-~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      .++.+. ..+..|.||+++  +++|||+|...++|.+++.+|...+.+.   .+..+|+|||++++
T Consensus       157 ~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~---~~~~~P~~lav~~~  219 (263)
T d1npea_         157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL---EGLQYPFAVTSYGK  219 (263)
T ss_dssp             CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE---ECCCSEEEEEEETT
T ss_pred             CceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEE---CCCCCcEEEEEECC
Confidence            887775 478999999997  7899999999999999999998877664   34668999999864

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.94  E-value=5.4e-25  Score=175.17  Aligned_cols=207  Identities=14%  Similarity=0.208  Sum_probs=169.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC----CCeEEEEeCCCCCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ----MDTISMANLNDDQP   78 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~----~~~I~~~~~~g~~~   78 (232)
                      +|++||. ++.|||+|...+ +|+|++.++.............|.||+++. .++||+++..    ...|...+.++...
T Consensus        43 EG~~~D~-~G~Ly~~D~~~g-~I~ri~p~g~~~~~~~~~~~~~p~gla~~~-dG~l~va~~~~~~~~~~i~~~~~~~~~~  119 (319)
T d2dg1a1          43 EGLNFDR-QGQLFLLDVFEG-NIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNL  119 (319)
T ss_dssp             EEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred             EeCEECC-CCCEEEEECCCC-EEEEEECCCCeEEEEEeCCCCCeeEEEECC-CCCEEEEecCCCccceeEEEEcCCCcee
Confidence            6999997 567999999999 999999998776566666667899999998 5679998754    45788888888877


Q ss_pred             EEEEe--CCCCCceEEEEeCCCCeEEEEEcCCC----CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEEC
Q psy5751          79 KVIVS--KDLVNPRGIVVHPYYRKLFWSDWNRS----GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        79 ~~~~~--~~~~~p~~iavd~~~~~ly~~d~~~~----~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      ..+..  .....|+++++++ +|.||+++....    .+.+++++.++...+.+...  +..||||+++++++.||++|+
T Consensus       120 ~~~~~~~~~~~~~nd~~~d~-~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~--~~~pnGia~s~dg~~lyvad~  196 (319)
T d2dg1a1         120 QDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTET  196 (319)
T ss_dssp             EEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEG
T ss_pred             eeeccCCCcccCCcceeEEe-ccceeecccccccccCcceeEEEecccceeEEEeec--cceeeeeeeccccceEEEecc
Confidence            76665  3466899999998 789999986522    45699999999887777665  789999999999889999999


Q ss_pred             CCCcEEEEecCCC--ceEEE-------ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccC
Q psy5751         153 DSKSLECMTIRNR--VRRKV-------YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMM  215 (232)
Q Consensus       153 ~~~~i~~~~~~g~--~~~~~-------~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~  215 (232)
                      ..++|++++++..  .....       ......|+|++++ +|+||++++..++|.+++++|+.+..|.+|..
T Consensus       197 ~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G~~l~~i~~P~~  269 (319)
T d2dg1a1         197 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGR  269 (319)
T ss_dssp             GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTG
T ss_pred             cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCCCcEEEEEeCCCc
Confidence            9999999988642  21111       2245679999997 78999999999999999999999888888754

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=3.8e-25  Score=171.11  Aligned_cols=219  Identities=16%  Similarity=0.253  Sum_probs=171.3

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|.++++|+ ++.+|+++.....+|.++...+.............|.||++|+ .++|||+|..++.|. +..++.....
T Consensus        15 ~P~~vavd~-dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~-~g~i~v~d~~~~~i~-~~~~~~~~~~   91 (260)
T d1rwia_          15 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDFNNRVVT-LAAGSNNQTV   91 (260)
T ss_dssp             CEEEEEECT-TCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECT-TCCEEEEETTTEEEE-ECTTCSCCEE
T ss_pred             CCCEEEEcC-CCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcC-CCCEEEeeeeeceee-eeeeccceee
Confidence            389999997 6789999876643788887776665444445578999999998 567999998876554 4445555544


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .....+..|.++++++ ++.||+++..  ..++.+.+.++.......... +..|.+|++++. +++|+++...++|.++
T Consensus        92 ~~~~~~~~p~~iavd~-~g~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~-g~~~v~~~~~~~i~~~  166 (260)
T d1rwia_          92 LPFDGLNYPEGLAVDT-QGAVYVADRG--NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNS-GNVYVTDTDNNRVVKL  166 (260)
T ss_dssp             CCCCSCCSEEEEEECT-TCCEEEEEGG--GTEEEEECTTCSSCEECCCCS-CCSCCEEEECTT-CCEEEEEGGGTEEEEE
T ss_pred             eeeeeeeecccccccc-cceeEeeccc--cccccccccccceeeeeeecc-cCCcceeeecCC-CCEeeecccccccccc
Confidence            4445678999999998 7899999975  567899988887766655554 889999999996 7899999999999999


Q ss_pred             ecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      +.++.....+. ..+..|.||+++ +|.|||+++.+++|.++.+++...+.+.  ..+...|.||++.++.
T Consensus       167 d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~--~~~~~~P~~i~~d~~g  235 (260)
T d1rwia_         167 EAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP--FTGLNTPLAVAVDSDR  235 (260)
T ss_dssp             CTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECC--CCSCCCEEEEEECTTC
T ss_pred             ccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEc--cCCCCCeEEEEEeCCC
Confidence            99988776664 578999999997 7899999999999999999987665443  3446789999998754

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=1.7e-24  Score=167.44  Aligned_cols=197  Identities=15%  Similarity=0.253  Sum_probs=161.2

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|.++++++ ++.|||+|..+. .+. +..++.............|.+|++|. .++||++|..++++.+.+.++.....
T Consensus        58 ~p~gvav~~-~g~i~v~d~~~~-~i~-~~~~~~~~~~~~~~~~~~p~~iavd~-~g~i~v~d~~~~~~~~~~~~~~~~~~  133 (260)
T d1rwia_          58 QPQGLAVDG-AGTVYVTDFNNR-VVT-LAAGSNNQTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTV  133 (260)
T ss_dssp             SCCCEEECT-TCCEEEEETTTE-EEE-ECTTCSCCEECCCCSCCSEEEEEECT-TCCEEEEEGGGTEEEEECTTCSSCEE
T ss_pred             CceEEEEcC-CCCEEEeeeeec-eee-eeeeccceeeeeeeeeeecccccccc-cceeEeeccccccccccccccceeee
Confidence            377899998 678999998866 544 44444443333334568899999998 56799999999999999999987766


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .....+..|.++++++ ++.+|++++.  ..+|.+++.++.......... +..|.||++|+. +.|||+|...++|.++
T Consensus       134 ~~~~~~~~p~~i~~~~-~g~~~v~~~~--~~~i~~~d~~~~~~~~~~~~~-~~~p~gi~~d~~-g~l~vsd~~~~~i~~~  208 (260)
T d1rwia_         134 LPFTGLNDPDGVAVDN-SGNVYVTDTD--NNRVVKLEAESNNQVVLPFTD-ITAPWGIAVDEA-GTVYVTEHNTNQVVKL  208 (260)
T ss_dssp             CCCCSCCSCCEEEECT-TCCEEEEEGG--GTEEEEECTTTCCEEECCCSS-CCSEEEEEECTT-CCEEEEETTTTEEEEE
T ss_pred             eeecccCCcceeeecC-CCCEeeeccc--cccccccccccceeeeeeccc-cCCCccceeeee-eeeeeeecCCCEEEEE
Confidence            6556788999999998 7889999976  568999999988777655454 889999999996 7999999999999999


Q ss_pred             ecCCCceEEEe-cCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         161 TIRNRVRRKVY-SNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       161 ~~~g~~~~~~~-~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      +.++.....+. ..+..|.+|+++ +|.|||+|+.+++|.+++..++.
T Consensus       209 ~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~~~~  256 (260)
T d1rwia_         209 LAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH  256 (260)
T ss_dssp             CTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred             eCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeCCCCc
Confidence            99887666553 477899999997 67999999999999999987654

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.91  E-value=3.9e-22  Score=155.51  Aligned_cols=222  Identities=14%  Similarity=0.207  Sum_probs=177.8

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-----CCCCccEEEEeecCCeEEEE-eCCCCeEEEEeCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-----NIRSPEGLTFDWVNRVLYWT-DSQMDTISMANLN   74 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-----~~~~p~gl~~d~~~~~ly~~-d~~~~~I~~~~~~   74 (232)
                      .|.++++++ ++.||++|..++ +|.+++.+|......-..     ....|.+++++...+..+++ +..+++|.+.+.+
T Consensus        24 ~P~gvavd~-dg~i~VaD~~n~-rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  101 (279)
T d1q7fa_          24 EPSGVAVNA-QNDIIVADTNNH-RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY  101 (279)
T ss_dssp             CEEEEEECT-TCCEEEEEGGGT-EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred             CccEEEEcC-CCCEEEEECCCC-EEEEEeCCCCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc
Confidence            489999998 678999999999 999999998765443221     23578999988766666665 4556789999999


Q ss_pred             CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      |.....+....+..|.++++++ ++.+|+++..  ..++.+.+.+|.....+-....+..|.++++|+. +.||+++...
T Consensus       102 g~~~~~~~~~~~~~p~~~avd~-~G~i~v~~~~--~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~-g~i~v~d~~~  177 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTVDN-KGRIIVVECK--VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRA  177 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEECT-TSCEEEEETT--TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEEEEEEGGG
T ss_pred             ccceeecCCCcccccceecccc-CCcEEEEeec--cceeeEeccCCceeecccccccccccceeeeccc-eeEEeeeccc
Confidence            8876666556788999999997 7899999975  5679999999876665544444788999999986 7999999999


Q ss_pred             CcEEEEecCCCceEEEec--CCCceEEEEEE-CCEEEEEeCCC-CcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCC
Q psy5751         155 KSLECMTIRNRVRRKVYS--NCTYPFGLSIT-DEKYYWTDWKT-NRIESANKEGERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       155 ~~i~~~~~~g~~~~~~~~--~~~~p~gla~~-~~~ly~td~~~-~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ++|+.++.+|.....+..  .+..|.||+++ +|+||++|+.+ .+|..++++|+..+.+.... ....|.+||+.++.
T Consensus       178 ~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~-~~~~p~~vav~~dG  255 (279)
T d1q7fa_         178 HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKV-KHAQCFDVALMDDG  255 (279)
T ss_dssp             TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESS-CCSCEEEEEEETTT
T ss_pred             cceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCCCEEEEEeCCC-CCCCEeEEEEeCCC
Confidence            999999999987777743  67889999997 78999999765 57999999998877776543 24589999998874

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.89  E-value=2.1e-21  Score=153.81  Aligned_cols=217  Identities=16%  Similarity=0.160  Sum_probs=160.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCC------CcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCCCCeEEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADK------SSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQMDTISMA   71 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~------~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~   71 (232)
                      |+|++||+ ++.||+++....      ++|++++.++.........    ....|.||++|..++.||+++.. +.|.++
T Consensus        20 ~EGpa~d~-dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~-~~i~~~   97 (314)
T d1pjxa_          20 AEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-LGLLVV   97 (314)
T ss_dssp             CEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-TEEEEE
T ss_pred             CeEeEEeC-CCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECC-CeEEEE
Confidence            68999998 778999876531      2799999987765444322    12469999999988889999865 579999


Q ss_pred             eCCCCCCEEEEe----CCCCCceEEEEeCCCCeEEEEEcCC-------------CCCcEEEEeCCCCCcEEEEEcCCCCC
Q psy5751          72 NLNDDQPKVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR-------------SGPKIEWSNLDGTDREIFLKAADLKL  134 (232)
Q Consensus        72 ~~~g~~~~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~-------------~~~~I~~~~~~g~~~~~~~~~~~~~~  134 (232)
                      +.+|.....+..    ..+..|+++++|+ +|.||+++...             ..++|++++.+|.... +...  +..
T Consensus        98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~-~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~-~~~~--~~~  173 (314)
T d1pjxa_          98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQ-VDTA--FQF  173 (314)
T ss_dssp             ETTSCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEE-EEEE--ESS
T ss_pred             eCCCcEEEEEeccccccccCCCcEEEECC-CCCEEEecCccCcccccccceeccCCceEEEEeecCceeE-eeCC--cce
Confidence            999876444332    2355799999998 79999998531             1357999998886443 3333  778


Q ss_pred             cceEEEeCCCC----EEEEEECCCCcEEEEecCCCc----eEEEec----CCCceEEEEEE-CCEEEEEeCCCCcEEEEe
Q psy5751         135 PNSLAVDFRTD----ELCWVDADSKSLECMTIRNRV----RRKVYS----NCTYPFGLSIT-DEKYYWTDWKTNRIESAN  201 (232)
Q Consensus       135 p~~l~~d~~~~----~Ly~~d~~~~~i~~~~~~g~~----~~~~~~----~~~~p~gla~~-~~~ly~td~~~~~i~~~~  201 (232)
                      ||||+++++++    .||++|+.+++|+++++++..    ++.+..    ....|+|++++ +|+||++++..++|.+++
T Consensus       174 pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~d  253 (314)
T d1pjxa_         174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG  253 (314)
T ss_dssp             EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             eeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEe
Confidence            99999988754    799999999999999876432    223322    34569999997 889999999999999999


Q ss_pred             CCCCCc-ceEEeccCCcceeEEEEEEc
Q psy5751         202 KEGERA-PSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       202 ~~g~~~-~~i~~~~~~~~~p~gi~~~~  227 (232)
                      ++|... ..+..+.   ..|.++++-+
T Consensus       254 p~~g~~~~~i~~p~---~~~t~~afg~  277 (314)
T d1pjxa_         254 PDGGQPKMRIRCPF---EKPSNLHFKP  277 (314)
T ss_dssp             TTCBSCSEEEECSS---SCEEEEEECT
T ss_pred             CCCCEEEEEEECCC---CCEEEEEEeC
Confidence            996654 4455432   4677888744

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.89  E-value=9.3e-21  Score=148.81  Aligned_cols=209  Identities=11%  Similarity=0.092  Sum_probs=160.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      +|..||..++.|||+|+..+ +|++++.++...+....+  ..|.+++.+. .+.|+++..  +.|.+++.++...+.+.
T Consensus        21 Egp~wd~~~~~l~wvDi~~~-~I~r~d~~~g~~~~~~~~--~~~~~i~~~~-dg~l~va~~--~gl~~~d~~tg~~~~l~   94 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILER-ELHELHLASGRKTVHALP--FMGSALAKIS-DSKQLIASD--DGLFLRDTATGVLTLHA   94 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGT-EEEEEETTTTEEEEEECS--SCEEEEEEEE-TTEEEEEET--TEEEEEETTTCCEEEEE
T ss_pred             eCCeEECCCCEEEEEECCCC-EEEEEECCCCeEEEEECC--CCcEEEEEec-CCCEEEEEe--CccEEeecccceeeEEe
Confidence            68889999999999999999 999999998765433323  4788999987 567777764  47999999887776666


Q ss_pred             e----CCCCCceEEEEeCCCCeEEEEEcCCC----CCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751          83 S----KDLVNPRGIVVHPYYRKLFWSDWNRS----GPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus        83 ~----~~~~~p~~iavd~~~~~ly~~d~~~~----~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                      .    ....+++++++|+ +|.+|+++....    .+.+++..  ......+...  +..|||++++++++.|||+|+..
T Consensus        95 ~~~~~~~~~~~nd~~vd~-~G~iw~~~~~~~~~~~~g~l~~~~--~g~~~~~~~~--~~~~Ng~~~s~d~~~l~~~dt~~  169 (295)
T d2ghsa1          95 ELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISIPNSICFSPDGTTGYFVDTKV  169 (295)
T ss_dssp             CSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESSEEEEEECTTSCEEEEEETTT
T ss_pred             eeecCCCcccceeeEECC-CCCEEEEeccccccccceeEeeec--CCcEEEEeec--cCCcceeeecCCCceEEEeeccc
Confidence            4    2344689999998 789999875321    33455553  2333444443  77899999999999999999999


Q ss_pred             CcEEEEecCCC------ceEEEec---CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEE
Q psy5751         155 KSLECMTIRNR------VRRKVYS---NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIA  224 (232)
Q Consensus       155 ~~i~~~~~~g~------~~~~~~~---~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~  224 (232)
                      ++|++++++..      .+..+..   ....|+|++++ +|+||++.+..++|.+++++|+....+.+|...   |..++
T Consensus       170 ~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~~---~T~~~  246 (295)
T d2ghsa1         170 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQ---TTCPA  246 (295)
T ss_dssp             CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSB---EEEEE
T ss_pred             ceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCCCcEeeEecCCCCc---eEEEE
Confidence            99999998742      2333332   45679999997 789999999999999999999999999887643   44444


Q ss_pred             E
Q psy5751         225 A  225 (232)
Q Consensus       225 ~  225 (232)
                      +
T Consensus       247 F  247 (295)
T d2ghsa1         247 F  247 (295)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.84  E-value=7.5e-19  Score=138.15  Aligned_cols=214  Identities=14%  Similarity=0.109  Sum_probs=163.4

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCC--CE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQ--PK   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~--~~   79 (232)
                      ++++++++ +++||+++...+ +|++++.+|...  .+......|.++++++ .++||+++...+.+.+++..+..  ..
T Consensus        30 ~e~iAv~p-dG~l~vt~~~~~-~I~~i~p~g~~~--~~~~~~~~~~gla~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          30 LENLASAP-DGTIFVTNHEVG-EIVSITPDGNQQ--IHATVEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             EEEEEECT-TSCEEEEETTTT-EEEEECTTCCEE--EEEECSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             cCCEEECC-CCCEEEEeCCCC-EEEEEeCCCCEE--EEEcCCCCcceEEEcC-CCCeEEEecCCceEEEEEeccccccee
Confidence            67899998 788999999999 999999988643  3333447899999999 46699999888888877765543  23


Q ss_pred             EEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC---------CCCCcceEEEeCCCCEEEE
Q psy5751          80 VIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA---------DLKLPNSLAVDFRTDELCW  149 (232)
Q Consensus        80 ~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~---------~~~~p~~l~~d~~~~~Ly~  149 (232)
                      .+.. .....|+++++++ ++.+|+++..  ..++++.+.++....+.....         ....+++++.+.  +.||+
T Consensus       105 ~~~~~~~~~~~n~i~~~~-~g~~~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~--~~l~~  179 (302)
T d2p4oa1         105 TLLTLPDAIFLNGITPLS-DTQYLTADSY--RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG--NFLYV  179 (302)
T ss_dssp             EEEECTTCSCEEEEEESS-SSEEEEEETT--TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET--TEEEE
T ss_pred             eccccCCccccceeEEcc-CCCEEeeccc--cccceeeeccCCcceeEecCCccceeeccCcccccccccccC--Cceee
Confidence            3333 5667899999997 7999999976  568999998887665554432         245678998874  79999


Q ss_pred             EECCCCcEEEEecCCCceE---EEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEE
Q psy5751         150 VDADSKSLECMTIRNRVRR---KVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAA  225 (232)
Q Consensus       150 ~d~~~~~i~~~~~~g~~~~---~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~  225 (232)
                      ++...++|++++.++....   ........|+|++++ +|.||++++..++|.+++++|+....... ..+...|..+|+
T Consensus       180 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~-~~~~~~pt~vaf  258 (302)
T d2p4oa1         180 SNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQA-EQGVIGSTAVAF  258 (302)
T ss_dssp             EETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECG-GGTCTTEEEEEE
T ss_pred             ecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEec-CCCCCCceEEEE
Confidence            9999999999999865322   122346679999997 78999999999999999999876554433 234556888887


Q ss_pred             E
Q psy5751         226 V  226 (232)
Q Consensus       226 ~  226 (232)
                      -
T Consensus       259 g  259 (302)
T d2p4oa1         259 G  259 (302)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.84  E-value=1.9e-18  Score=134.35  Aligned_cols=196  Identities=16%  Similarity=0.155  Sum_probs=156.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      |.+++++...+..+++....+.+|.+.+.+|..........+..|.++++|. .+.+|+++...+++.+.+.+|.....+
T Consensus        72 p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~p~~~avd~-~G~i~v~~~~~~~~~~~~~~g~~~~~~  150 (279)
T d1q7fa_          72 PNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNVLHKF  150 (279)
T ss_dssp             EEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEE
T ss_pred             cccccccccccccceeccCCccccccccccccceeecCCCcccccceecccc-CCcEEEEeeccceeeEeccCCceeecc
Confidence            6778887777777766544333888888888776555556678999999997 667999999999999999999775554


Q ss_pred             Ee-CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-CcEEE
Q psy5751          82 VS-KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-KSLEC  159 (232)
Q Consensus        82 ~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-~~i~~  159 (232)
                      -. ..+..|.++++++ ++.+|+++..  .++|++.+.+|.....+.....+..|.||++|+. +.||++|... .+|..
T Consensus       151 g~~~~~~~~~~i~~d~-~g~i~v~d~~--~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~-G~i~Vad~~~~~~v~~  226 (279)
T d1q7fa_         151 GCSKHLEFPNGVVVND-KQEIFISDNR--AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSN-GEILIADNHNNFNLTI  226 (279)
T ss_dssp             ECTTTCSSEEEEEECS-SSEEEEEEGG--GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTT-CCEEEEECSSSCEEEE
T ss_pred             cccccccccceeeecc-ceeEEeeecc--ccceeeeecCCceeeeecccccccCCcccccccC-CeEEEEECCCCcEEEE
Confidence            43 5688999999997 7899999986  5789999999876655543334788999999997 6799999865 47999


Q ss_pred             EecCCCceEEEec--CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         160 MTIRNRVRRKVYS--NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       160 ~~~~g~~~~~~~~--~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      ++.+|.-...+..  ....|.+||++ ++.||+++. +++|..++..
T Consensus       227 f~~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~~-n~~v~~fr~~  272 (279)
T d1q7fa_         227 FTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK-DYRLYIYRYV  272 (279)
T ss_dssp             ECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET-TTEEEEEECS
T ss_pred             ECCCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEEeC-CCeEEEEEee
Confidence            9999987777754  45679999997 789999995 6888888866

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.82  E-value=5.8e-18  Score=134.07  Aligned_cols=184  Identities=17%  Similarity=0.172  Sum_probs=143.6

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCC--CCCcEEEEeCCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNR--SGPKIEWSNLDGT  121 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~--~~~~I~~~~~~g~  121 (232)
                      ...+|+++|. .++|||+|...++|++++.++.............|.+|++++ +|.||+++...  ....|...+..+.
T Consensus        40 ~~lEG~~~D~-~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~-dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          40 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             cCcEeCEECC-CCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECC-CCCEEEEecCCCccceeEEEEcCCCc
Confidence            4568999997 467999999999999999999876665555667899999998 78999998542  2456888888887


Q ss_pred             CcEEEEEc-CCCCCcceEEEeCCCCEEEEEECC------CCcEEEEecCCCceEEEecCCCceEEEEEE--CCEEEEEeC
Q psy5751         122 DREIFLKA-ADLKLPNSLAVDFRTDELCWVDAD------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDW  192 (232)
Q Consensus       122 ~~~~~~~~-~~~~~p~~l~~d~~~~~Ly~~d~~------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~  192 (232)
                      ........ .....|+++++|++ ++||++|..      .+.++++++++...+.+...+..|+||++.  ++.||+++.
T Consensus       118 ~~~~~~~~~~~~~~~nd~~~d~~-G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~  196 (319)
T d2dg1a1         118 NLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET  196 (319)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred             eeeeeccCCCcccCCcceeEEec-cceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecc
Confidence            77666543 22567999999997 789999875      346999999998888888889999999995  568999999


Q ss_pred             CCCcEEEEeCC--CCCcce----EEeccCCcceeEEEEEEcCCC
Q psy5751         193 KTNRIESANKE--GERAPS----IALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       193 ~~~~i~~~~~~--g~~~~~----i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      .+++|++++.+  |.....    ......+...|.|+++..+++
T Consensus       197 ~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~  240 (319)
T d2dg1a1         197 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDN  240 (319)
T ss_dssp             GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCC
T ss_pred             cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCC
Confidence            99999999865  333221    122223356799999988764

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.82  E-value=1.6e-18  Score=137.02  Aligned_cols=194  Identities=14%  Similarity=0.170  Sum_probs=147.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCC-------------
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQ-------------   64 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~-------------   64 (232)
                      |.++.+++..+.||+++.. + .|.+++.+|.....+...    .+..|+++++|. .++||++|..             
T Consensus        73 P~Gl~~~~dg~~l~vad~~-~-~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~-~G~lyvtd~~~~~~~~~~~~~~~  149 (314)
T d1pjxa_          73 PAGCQCDRDANQLFVADMR-L-GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQ  149 (314)
T ss_dssp             EEEEEECSSSSEEEEEETT-T-EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTS
T ss_pred             ceeEEEeCCCCEEEEEECC-C-eEEEEeCCCcEEEEEeccccccccCCCcEEEECC-CCCEEEecCccCcccccccceec
Confidence            7899999988899999865 4 699999998654222111    245799999998 5789999853             


Q ss_pred             --CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCC----eEEEEEcCCCCCcEEEEeCCCCCc----EEEEEcC--CC
Q psy5751          65 --MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYR----KLFWSDWNRSGPKIEWSNLDGTDR----EIFLKAA--DL  132 (232)
Q Consensus        65 --~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~----~ly~~d~~~~~~~I~~~~~~g~~~----~~~~~~~--~~  132 (232)
                        .++|++++.+|......  ..+..|+|+++++..+    .||+++..  ..+|+++++++...    ++.....  ..
T Consensus       150 ~~~G~v~~~~~dg~~~~~~--~~~~~pNGi~~~~d~d~~~~~lyv~d~~--~~~i~~~d~~~~g~~~~~~~~~~~~~~~~  225 (314)
T d1pjxa_         150 EKFGSIYCFTTDGQMIQVD--TAFQFPNGIAVRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTHE  225 (314)
T ss_dssp             SSCEEEEEECTTSCEEEEE--EEESSEEEEEEEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred             cCCceEEEEeecCceeEee--CCcceeeeeEECCCCCcceeEEEEEeec--ccceEEeeccCccccceeeEEEEcccccc
Confidence              35799999988654333  3577899999987543    79999976  57899988764432    2222211  13


Q ss_pred             CCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceE-EEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         133 KLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRR-KVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       133 ~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~-~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      ..|.||++|.+ ++||+++...++|.+++++++... .+......|.++++.  .+.||+|+..+++|++++..
T Consensus       226 ~~pdGiavD~~-GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         226 GGADGMDFDED-NNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             CEEEEEEEBTT-CCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             ccceeeEEecC-CcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            46899999987 899999999999999999977654 344456789999994  44799999999999999976

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.71  E-value=2.2e-15  Score=117.99  Aligned_cols=180  Identities=12%  Similarity=0.059  Sum_probs=134.8

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC--
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT--  121 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~--  121 (232)
                      ..++++|+++ .++||+++...++|++++.+|... .+.. ....|.++++++ +|.||++++..  .++.++.+.+.  
T Consensus        28 ~~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~g~~~-~~~~-~~~~~~gla~~~-dG~l~v~~~~~--~~~~~~~~~~~~~  101 (302)
T d2p4oa1          28 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ-IHAT-VEGKVSGLAFTS-NGDLVATGWNA--DSIPVVSLVKSDG  101 (302)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE-EEEE-CSSEEEEEEECT-TSCEEEEEECT--TSCEEEEEECTTS
T ss_pred             CCcCCEEECC-CCCEEEEeCCCCEEEEEeCCCCEE-EEEc-CCCCcceEEEcC-CCCeEEEecCC--ceEEEEEeccccc
Confidence            5789999999 567999999999999999998643 3333 456899999998 78899998763  44665555433  


Q ss_pred             CcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEec-----------CCCceEEEEEECCEEEEE
Q psy5751         122 DREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-----------NCTYPFGLSITDEKYYWT  190 (232)
Q Consensus       122 ~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-----------~~~~p~gla~~~~~ly~t  190 (232)
                      ....+........|++++++++ +++|+++...+.+++++.++.....+..           ....+.|++.+++.+|++
T Consensus       102 ~~~~~~~~~~~~~~n~i~~~~~-g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~  180 (302)
T d2p4oa1         102 TVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS  180 (302)
T ss_dssp             CEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE
T ss_pred             ceeeccccCCccccceeEEccC-CCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeee
Confidence            2334444333778999999997 8999999999999999999876554422           345678999999999999


Q ss_pred             eCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcCCC
Q psy5751         191 DWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPSSC  230 (232)
Q Consensus       191 d~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~~~  230 (232)
                      +...++|++++.++...............|.||++..+++
T Consensus       181 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~  220 (302)
T d2p4oa1         181 NTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN  220 (302)
T ss_dssp             ETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC
T ss_pred             cCCCCeEEeccccccccccccccccCCCCCcceEECCCCC
Confidence            9999999999987533221111112345689999988764

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.53  E-value=4e-11  Score=91.82  Aligned_cols=218  Identities=17%  Similarity=0.185  Sum_probs=161.2

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .|.++++++..+.||+++..++ +|..+++........+.. ...|.++++++.++.+|++......+...+..+.....
T Consensus        33 ~p~~va~spdG~~l~v~~~~~~-~i~v~d~~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (301)
T d1l0qa2          33 NPMGAVISPDGTKVYVANAHSN-DVSIIDTATNNVIATVPA-GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG  110 (301)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGT-EEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CceEEEEeCCCCEEEEEECCCC-EEEEEECCCCceeeeeec-cccccccccccccccccccccccceeeecccccceeee
Confidence            3789999998889999998888 999999986654333433 35899999999888999999888889999988766555


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .+. ....|..+++++.+..++.+...  ...+...+.........+..  ...|..++++++.+.+|++......+...
T Consensus       111 ~~~-~~~~~~~~~~~~dg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (301)
T d1l0qa2         111 TVK-TGKSPLGLALSPDGKKLYVTNNG--DKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVI  185 (301)
T ss_dssp             EEE-CSSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             ecc-ccccceEEEeecCCCeeeeeecc--ccceeeeeccccceeeeccc--CCCceEEEeeccccceeeecccccccccc
Confidence            554 44678999999978888877754  34456666554443333333  56799999999999999998888878777


Q ss_pred             ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCC--CCcEEEEeCCCC-CcceEEeccCCcceeEEEEEEcCC
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWK--TNRIESANKEGE-RAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~--~~~i~~~~~~g~-~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ................|.++++.  +..+|++...  .+.|..++.... ....+.  .  ...|.+|++-+++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~--~--~~~~~~va~spdg  255 (301)
T d1l0qa2         186 DTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP--V--GPDPAGIAVTPDG  255 (301)
T ss_dssp             ETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE--C--CSSEEEEEECTTS
T ss_pred             cccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEc--C--CCCEEEEEEeCCC
Confidence            77766655556667789999984  6788887544  467888887633 322332  1  3468999987764

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.51  E-value=4.9e-11  Score=91.31  Aligned_cols=207  Identities=15%  Similarity=0.208  Sum_probs=153.5

Q ss_pred             CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceE
Q psy5751          12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRG   91 (232)
Q Consensus        12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~   91 (232)
                      ..+|+++..++ .|..++++.......+..+ ..|.++++++.++.||+++...+.|.+.|+........+. ....|.+
T Consensus         2 ~~~yV~~~~~~-~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~-~~~~~~~   78 (301)
T d1l0qa2           2 TFAYIANSESD-NISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-AGSSPQG   78 (301)
T ss_dssp             EEEEEEETTTT-EEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-CSSSEEE
T ss_pred             eEEEEEECCCC-EEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeee-ccccccc
Confidence            35899998888 9999999876654444433 5799999999889999999998999999998765544444 4457999


Q ss_pred             EEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEe
Q psy5751          92 IVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVY  171 (232)
Q Consensus        92 iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~  171 (232)
                      +++++.++.++++...  ...+...+.........+..  ...|..+++++++..++++......+...+..........
T Consensus        79 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (301)
T d1l0qa2          79 VAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV  154 (301)
T ss_dssp             EEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cccccccccccccccc--cceeeecccccceeeeeccc--cccceEEEeecCCCeeeeeeccccceeeeeccccceeeec
Confidence            9999977888887765  45677777765544444443  5678999999999999999888888888888776665556


Q ss_pred             cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEcC
Q psy5751         172 SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       172 ~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      .....|..+++.  +..+|++......+.............   ......|.++++..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  210 (301)
T d1l0qa2         155 SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT---VKVEAAPSGIAVNPE  210 (301)
T ss_dssp             ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE---EECSSEEEEEEECTT
T ss_pred             ccCCCceEEEeeccccceeeecccccccccccccceeeeec---ccccCCcceeecccc
Confidence            667778888884  678999988877766666554433222   133456788777654

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.51  E-value=5.3e-12  Score=98.20  Aligned_cols=181  Identities=8%  Similarity=-0.014  Sum_probs=130.9

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC----CCCCccEEEEeecCCeEEEEeCC------CCeEEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT----NIRSPEGLTFDWVNRVLYWTDSQ------MDTISMA   71 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~----~~~~p~gl~~d~~~~~ly~~d~~------~~~I~~~   71 (232)
                      +.+++.+. ++.|+++..  + .|++++.++...+.+...    ....++++++|+ .+++|+++..      .+.+++.
T Consensus        61 ~~~i~~~~-dg~l~va~~--~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~-~G~iw~~~~~~~~~~~~g~l~~~  135 (295)
T d2ghsa1          61 GSALAKIS-DSKQLIASD--D-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHV  135 (295)
T ss_dssp             EEEEEEEE-TTEEEEEET--T-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEE
T ss_pred             cEEEEEec-CCCEEEEEe--C-ccEEeecccceeeEEeeeecCCCcccceeeEECC-CCCEEEEeccccccccceeEeee
Confidence            45677776 678888753  4 799999997776555432    234678999998 5678888643      2345555


Q ss_pred             eCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC------cEEEEEc-CCCCCcceEEEeCCC
Q psy5751          72 NLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD------REIFLKA-ADLKLPNSLAVDFRT  144 (232)
Q Consensus        72 ~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~------~~~~~~~-~~~~~p~~l~~d~~~  144 (232)
                      . +|. ...+. ..+..|+++++++.++.|||++..  ..+|++++++...      ....... .....|.|+++|.+ 
T Consensus       136 ~-~g~-~~~~~-~~~~~~Ng~~~s~d~~~l~~~dt~--~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~-  209 (295)
T d2ghsa1         136 A-KGK-VTKLF-ADISIPNSICFSPDGTTGYFVDTK--VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE-  209 (295)
T ss_dssp             E-TTE-EEEEE-EEESSEEEEEECTTSCEEEEEETT--TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT-
T ss_pred             c-CCc-EEEEe-eccCCcceeeecCCCceEEEeecc--cceeeEeeecccccccccceEEEeccCcccccccceEEcCC-
Confidence            4 332 23333 367789999999988999999986  5689999887542      2333332 12557999999997 


Q ss_pred             CEEEEEECCCCcEEEEecCCCceEEEecCCCceEEEEEE---CCEEEEEeCC
Q psy5751         145 DELCWVDADSKSLECMTIRNRVRRKVYSNCTYPFGLSIT---DEKYYWTDWK  193 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~---~~~ly~td~~  193 (232)
                      +.||++....++|.+++++|.....+.--...|..+++-   .+.||+|-..
T Consensus       210 GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~  261 (295)
T d2ghsa1         210 GHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR  261 (295)
T ss_dssp             SCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             CCEEeeeeCCCceEEecCCCcEeeEecCCCCceEEEEEeCCCCCEEEEEECC
Confidence            799999999999999999998776664444678899984   4789999764

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.36  E-value=6.9e-10  Score=86.06  Aligned_cols=222  Identities=15%  Similarity=0.110  Sum_probs=147.9

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEE--EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDV--ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~--~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      |.++++++.++.||+++.... .+.....+.......  .......|.++++++.++.+|+++.....|...+.......
T Consensus        85 p~~l~~spDg~~l~v~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~  163 (333)
T d1ri6a_          85 LTHISTDHQGQFVFVGSYNAG-NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL  163 (333)
T ss_dssp             CSEEEECTTSSEEEEEETTTT-EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred             ceEEEEcCCCCEEeecccCCC-ceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcc
Confidence            567999999999999998887 787777765443222  23445688999999999999999988888888877665432


Q ss_pred             EEE------eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc-------CCCCCcceEEEeCCCCE
Q psy5751          80 VIV------SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA-------ADLKLPNSLAVDFRTDE  146 (232)
Q Consensus        80 ~~~------~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~-------~~~~~p~~l~~d~~~~~  146 (232)
                      ...      ......|+.+++++....+|++........+................       .....|.++++++++.+
T Consensus       164 ~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~  243 (333)
T d1ri6a_         164 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH  243 (333)
T ss_dssp             EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred             eeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCc
Confidence            211      14567889999999888888887653332333333333332222111       11456788999999899


Q ss_pred             EEEEECCCCcEEEEecC--CCceEEE--ecCCCceEEEEEE--CCEEEEEeCCCCcEEEE--eCCCCCcceE-EeccCCc
Q psy5751         147 LCWVDADSKSLECMTIR--NRVRRKV--YSNCTYPFGLSIT--DEKYYWTDWKTNRIESA--NKEGERAPSI-ALDMMGT  217 (232)
Q Consensus       147 Ly~~d~~~~~i~~~~~~--g~~~~~~--~~~~~~p~gla~~--~~~ly~td~~~~~i~~~--~~~g~~~~~i-~~~~~~~  217 (232)
                      +|.+....+.+..+.++  +...+..  ......|.++++.  +.+||+++..++.|..+  +..++.++.+ ..+.  .
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~~~~~~~~--g  321 (333)
T d1ri6a_         244 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV--G  321 (333)
T ss_dssp             EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC--S
T ss_pred             eeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcEEEEEeccC--C
Confidence            99998887766555544  4433333  2355679999994  66899998888876665  4444444433 2222  2


Q ss_pred             ceeEEEEEE
Q psy5751         218 TYMYGIAAV  226 (232)
Q Consensus       218 ~~p~gi~~~  226 (232)
                      ..|..|++.
T Consensus       322 ~~p~~v~~~  330 (333)
T d1ri6a_         322 QGPMWVVVN  330 (333)
T ss_dssp             SSCCEEEEE
T ss_pred             CCCcEEEEE
Confidence            347888774

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.33  E-value=1.5e-09  Score=84.01  Aligned_cols=224  Identities=12%  Similarity=0.106  Sum_probs=150.1

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce--eEEE-eCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV--EDVI-TTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~--~~~~-~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      |.+++|++..+.||+++..++ .|..++++....  +... ......|.++++++.++.||+++.....|...+.+....
T Consensus        39 v~~la~spDG~~L~v~~~~d~-~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~  117 (333)
T d1ri6a_          39 VQPMVVSPDKRYLYVGVRPEF-RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP  117 (333)
T ss_dssp             CCCEEECTTSSEEEEEETTTT-EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred             EeEEEEeCCCCEEEEEECCCC-eEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccc
Confidence            468999999899999998777 888887764332  2221 223467999999999999999998888888877766554


Q ss_pred             EEEE--eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEE-----EEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751          79 KVIV--SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIF-----LKAADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        79 ~~~~--~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~-----~~~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      ....  ......|.++++++.+..+|+++..  ...|...+.........     ........|..+++++.+..+|++.
T Consensus       118 ~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~  195 (333)
T d1ri6a_         118 VGVVDVVEGLDGCHSANISPDNRTLWVPALK--QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN  195 (333)
T ss_dssp             EEEEEEECCCTTBCCCEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred             eecccccCCCccceEEEeeecceeeeccccc--cceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeec
Confidence            3332  2566678999999988889998876  34566666554432221     1222256789999999999999998


Q ss_pred             CCCCcEEEEecCCC--ceEE---Ee------cCCCceEEEEE--ECCEEEEEeCCCCcEEEEeC--CCCCcceEEeccCC
Q psy5751         152 ADSKSLECMTIRNR--VRRK---VY------SNCTYPFGLSI--TDEKYYWTDWKTNRIESANK--EGERAPSIALDMMG  216 (232)
Q Consensus       152 ~~~~~i~~~~~~g~--~~~~---~~------~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~--~g~~~~~i~~~~~~  216 (232)
                      ...+.......+..  ....   +.      .....|.++++  ++.++|.+....+.+..+..  ++...+...... .
T Consensus       196 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  274 (333)
T d1ri6a_         196 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP-T  274 (333)
T ss_dssp             TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-C
T ss_pred             cccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeC-C
Confidence            87776666655432  2211   11      13355677777  36689998888776665554  444444333222 2


Q ss_pred             cceeEEEEEEcCC
Q psy5751         217 TTYMYGIAAVPSS  229 (232)
Q Consensus       217 ~~~p~gi~~~~~~  229 (232)
                      ...|.++++-+++
T Consensus       275 ~~~p~~~a~spDG  287 (333)
T d1ri6a_         275 ETQPRGFNVDHSG  287 (333)
T ss_dssp             SSSCCCEEECTTS
T ss_pred             CCCeeEEEEeCCC
Confidence            3468888876654

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.31  E-value=1e-09  Score=87.46  Aligned_cols=195  Identities=10%  Similarity=-0.034  Sum_probs=128.9

Q ss_pred             EEEEEEcCCCCcEEEEEcCCCc--eeEE---EeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCC
Q psy5751          13 QVYYSSVADKSSIKRAHLDGKN--VEDV---ITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLV   87 (232)
Q Consensus        13 ~ly~~d~~~~~~i~~~~~~g~~--~~~~---~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~   87 (232)
                      .||+.-+.+.+.|+.+.++...  .+.+   ....-..|..|++++.++.||.++...-..+.++.++............
T Consensus         4 ~l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~   83 (365)
T d1jofa_           4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGG   83 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCS
T ss_pred             EEEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCC
Confidence            4677776544368877777543  2111   1223346788999999999999987644455555555443333233456


Q ss_pred             CceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cE------------EEEE--cCCCCCcceEEEeCCCCEEEEEE
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--RE------------IFLK--AADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~------------~~~~--~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      .|..+++++.++.+|++..+...+++.........  ..            ....  ......|.++++++++++||+++
T Consensus        84 ~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d  163 (365)
T d1jofa_          84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD  163 (365)
T ss_dssp             SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred             CcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEee
Confidence            79999999988888988766556667654432211  11            1111  11134578999999999999999


Q ss_pred             CCCCcEEEEecCCCce-EEE---e--cCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751         152 ADSKSLECMTIRNRVR-RKV---Y--SNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERA  207 (232)
Q Consensus       152 ~~~~~i~~~~~~g~~~-~~~---~--~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~  207 (232)
                      .+.++|+.++.+.... ...   .  .....|.++++.  ...+|+++..++.|..++.++...
T Consensus       164 ~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~  227 (365)
T d1jofa_         164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH  227 (365)
T ss_dssp             TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred             CCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCc
Confidence            9999999987764322 211   1  135679999995  568999999999999998875443

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.30  E-value=9e-10  Score=87.85  Aligned_cols=169  Identities=14%  Similarity=0.072  Sum_probs=117.2

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce-e---EEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV-E---DVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~-~---~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      +|+++.|++..+.||++|...+ +|+++..+.... .   .+.. ..-..|..+++++.++.+|++....+.|.+++++.
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d-~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~  224 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTAN-KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP  224 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTT-EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             cceEEEECCCCCEEEEeeCCCC-EEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC
Confidence            4789999999999999999988 888887664321 1   1122 22468999999999999999999999999999877


Q ss_pred             CCCEEEEe-------------------CCCCCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCC--CCCcEEE-EE-c
Q psy5751          76 DQPKVIVS-------------------KDLVNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLD--GTDREIF-LK-A  129 (232)
Q Consensus        76 ~~~~~~~~-------------------~~~~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~--g~~~~~~-~~-~  129 (232)
                      .....+..                   .....+..++++|.+++||++..+.+   ...|...+.+  +...... +. .
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~  304 (365)
T d1jofa_         225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT  304 (365)
T ss_dssp             TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC
T ss_pred             CCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEE
Confidence            65322111                   01123568999999999999975422   2235444433  3322211 11 1


Q ss_pred             -CCCCCcceEEEeC-CCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751         130 -ADLKLPNSLAVDF-RTDELCWVDADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus       130 -~~~~~p~~l~~d~-~~~~Ly~~d~~~~~i~~~~~~g~~~~~~  170 (232)
                       ....+|.++++++ ++++||+++...+.|..++.++.....+
T Consensus       305 ~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~l~~~  347 (365)
T d1jofa_         305 PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRV  347 (365)
T ss_dssp             SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEE
T ss_pred             EcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCcCcEE
Confidence             1256899999998 6678999999999888888776654444

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.11  E-value=3.4e-08  Score=77.68  Aligned_cols=186  Identities=13%  Similarity=0.080  Sum_probs=122.1

Q ss_pred             eEEEEEeCCCCEEEEEEcC----------C-CCcEEEEEcCCCcee--EE-EeCC-----CCCccEEEEeec---CCeEE
Q psy5751           2 LIGITVDCVEGQVYYSSVA----------D-KSSIKRAHLDGKNVE--DV-ITTN-----IRSPEGLTFDWV---NRVLY   59 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~----------~-~~~i~~~~~~g~~~~--~~-~~~~-----~~~p~gl~~d~~---~~~ly   59 (232)
                      |+.|+.++ ++.+|.+...          + .+.|+.++++....+  ++ +..+     ...|.||.+...   ...||
T Consensus        37 ~EDi~~~~-dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~  115 (340)
T d1v04a_          37 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  115 (340)
T ss_dssp             CCEEEECT-TSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             cceEEECC-CCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEE
Confidence            56788887 6777776521          1 138999998754321  22 1221     147999988432   22688


Q ss_pred             EEeC--CCCeEEEEeCCCCCCE-----EEEeCCCCCceEEEEeCCCCeEEEEEcCCC-------------CCcEEEEeCC
Q psy5751          60 WTDS--QMDTISMANLNDDQPK-----VIVSKDLVNPRGIVVHPYYRKLFWSDWNRS-------------GPKIEWSNLD  119 (232)
Q Consensus        60 ~~d~--~~~~I~~~~~~g~~~~-----~~~~~~~~~p~~iavd~~~~~ly~~d~~~~-------------~~~I~~~~~~  119 (232)
                      +.+.  ...+|...+++....+     .+....+..|+++++.. .+.+|+|+....             .+...+...+
T Consensus       116 vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~-~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~  194 (340)
T d1v04a_         116 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS  194 (340)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEEC
T ss_pred             EEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEec-CCCEEEecCccCcChhhhhhhHhhcCCceeEEEEc
Confidence            8875  3455655544333222     22225677899999996 789999963211             1233445556


Q ss_pred             CCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEE---EecCCCceEEEEEE--CCEEEEEe
Q psy5751         120 GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRK---VYSNCTYPFGLSIT--DEKYYWTD  191 (232)
Q Consensus       120 g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~---~~~~~~~p~gla~~--~~~ly~td  191 (232)
                      +...+++...  +..||||+++++++.||++++...+|+++++++...-.   .......|+++.++  ++.+|++-
T Consensus       195 ~~~~~~~~~~--l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         195 PNDVRVVAEG--FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             SSCEEEEEEE--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             CCceEEEcCC--CCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            6677776665  88999999999999999999999999999888654221   22355669999996  45677764

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.10  E-value=4.4e-08  Score=77.03  Aligned_cols=183  Identities=15%  Similarity=0.149  Sum_probs=121.6

Q ss_pred             CCCccEEEEeecCCeEEEEeC------------CCCeEEEEeCCCCCCEE---EEeCC-----CCCceEEEEeCC-CC--
Q psy5751          43 IRSPEGLTFDWVNRVLYWTDS------------QMDTISMANLNDDQPKV---IVSKD-----LVNPRGIVVHPY-YR--   99 (232)
Q Consensus        43 ~~~p~gl~~d~~~~~ly~~d~------------~~~~I~~~~~~g~~~~~---~~~~~-----~~~p~~iavd~~-~~--   99 (232)
                      ...|++|++++ .+.+|++..            ..++|+..|++......   .....     .-.|.||.+... ++  
T Consensus        34 ~~G~EDi~~~~-dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~  112 (340)
T d1v04a_          34 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTV  112 (340)
T ss_dssp             CSCCCEEEECT-TSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCE
T ss_pred             CCCcceEEECC-CCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcE
Confidence            35799999997 567776652            14899999987765322   22222     137999987332 23  


Q ss_pred             eEEEEEcCCCCCcEEEEeCCCCCcEEE----EEcCCCCCcceEEEeCCCCEEEEEECC---------------CCcEEEE
Q psy5751         100 KLFWSDWNRSGPKIEWSNLDGTDREIF----LKAADLKLPNSLAVDFRTDELCWVDAD---------------SKSLECM  160 (232)
Q Consensus       100 ~ly~~d~~~~~~~I~~~~~~g~~~~~~----~~~~~~~~p~~l~~d~~~~~Ly~~d~~---------------~~~i~~~  160 (232)
                      +||+.+-.....+|....++....+..    +..+.+..||++++..+ +.+|+|+.+               ......+
T Consensus       113 ~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~-g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~  191 (340)
T d1v04a_         113 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVT  191 (340)
T ss_dssp             EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEET-TEEEEEESCSCCSHHHHHHHHHTTCCCEEEE
T ss_pred             EEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecC-CCEEEecCccCcChhhhhhhHhhcCCceeEE
Confidence            677777533455677666543332211    12234788999999987 789999642               1234445


Q ss_pred             ecCCCceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCcceEEeccCCcceeEEEEEEc
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      ..++...+++++.+..|+||++.  ++.||+++...++|.++..++...-.......-+..|.+|.+.+
T Consensus       192 ~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~  260 (340)
T d1v04a_         192 YYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDP  260 (340)
T ss_dssp             EECSSCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECT
T ss_pred             EEcCCceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEec
Confidence            56777778888899999999995  67999999999999999887543211111122367899999874

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.01  E-value=5.5e-07  Score=72.92  Aligned_cols=191  Identities=8%  Similarity=0.010  Sum_probs=137.9

Q ss_pred             CEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCce
Q psy5751          12 GQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPR   90 (232)
Q Consensus        12 ~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~   90 (232)
                      +.++++.-.++ +|..++.+.......+..+ ..|.++++.+.++.+|.++. .+.|.+.+++......+.. .....|.
T Consensus        32 ~~~~v~~~d~g-~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~-dg~v~~~d~~t~~~~~~~~i~~~~~~~  108 (432)
T d1qksa2          32 NLFSVTLRDAG-QIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIGSEAR  108 (432)
T ss_dssp             GEEEEEETTTT-EEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred             cEEEEEEcCCC-EEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcC-CCCEEEEEeeCCCceEEEEEecCCCCC
Confidence            35567777777 9999999987765566555 57999999999999998875 4789999987665443332 3456788


Q ss_pred             EEEEeC----CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----------CCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          91 GIVVHP----YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----------DLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        91 ~iavd~----~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----------~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      +++..+    ..++||++...  .+.|...+.+...........          ....+.++++++++..+|++....+.
T Consensus       109 ~~~~s~~~SpDG~~l~vs~~~--~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~  186 (432)
T d1qksa2         109 SIETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK  186 (432)
T ss_dssp             EEEECCSTTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred             CeEEecccCCCCCEEEEEcCC--CCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCe
Confidence            888764    45678888764  456888887766544333211          02344578889998899999999999


Q ss_pred             EEEEecCCCceEEE--ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCCc
Q psy5751         157 LECMTIRNRVRRKV--YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGERA  207 (232)
Q Consensus       157 i~~~~~~g~~~~~~--~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~~  207 (232)
                      |..++....+...+  ......|.++++.  +.++|++...++.+..++......
T Consensus       187 i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~  241 (432)
T d1qksa2         187 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL  241 (432)
T ss_dssp             EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred             EEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceE
Confidence            99999876544333  2345678999995  557899998888999888875443

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=98.92  E-value=4.5e-07  Score=73.85  Aligned_cols=148  Identities=17%  Similarity=0.204  Sum_probs=98.9

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeC-C-------CCCccEEEEee---cCCeEEEEeCC-----
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITT-N-------IRSPEGLTFDW---VNRVLYWTDSQ-----   64 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~-~-------~~~p~gl~~d~---~~~~ly~~d~~-----   64 (232)
                      .|.+|+|.+ +++||++.-..+ +|.+++.++....++... .       -..-.||++|+   .++.||++...     
T Consensus        28 ~P~~la~~p-dg~llVter~~G-~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~  105 (450)
T d1crua_          28 KPHALLWGP-DNQIWLTERATG-KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (450)
T ss_dssp             SEEEEEECT-TSCEEEEETTTC-EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CceEEEEeC-CCeEEEEEecCC-EEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCC
Confidence            488999998 788999986666 899998777665444321 1       12335799986   46889986421     


Q ss_pred             -------CCeEEEEeCCCCCC-----EEEEe----CCCCCceEEEEeCCCCeEEEEEcCC--------------------
Q psy5751          65 -------MDTISMANLNDDQP-----KVIVS----KDLVNPRGIVVHPYYRKLFWSDWNR--------------------  108 (232)
Q Consensus        65 -------~~~I~~~~~~g~~~-----~~~~~----~~~~~p~~iavd~~~~~ly~~d~~~--------------------  108 (232)
                             ...+.+...+....     +.++.    .....-..|++++ +|.||++-...                    
T Consensus       106 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgp-DG~LYvs~Gd~~~~~~~~~~~~~~~~~~~~~  184 (450)
T d1crua_         106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQ  184 (450)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCH
T ss_pred             cccccccceEEEeeecccccccccceEEEeecccccccccccceeEcC-CCCEEEEecCCCcccccccccccccccCccc
Confidence                   11344555444432     22322    2223456899998 78999986431                    


Q ss_pred             ----------CCCcEEEEeCCCCCc-----------EEEEEcCCCCCcceEEEeCCCCEEEEEECCC
Q psy5751         109 ----------SGPKIEWSNLDGTDR-----------EIFLKAADLKLPNSLAVDFRTDELCWVDADS  154 (232)
Q Consensus       109 ----------~~~~I~~~~~~g~~~-----------~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~  154 (232)
                                ..++|.|++.++...           ++....  +.+|.++++|+ +++||.+|.+.
T Consensus       185 ~~~~~q~~~~~~Gkilri~~dg~~~~dnP~~~~~~~ei~a~G--~RNp~g~~~~p-~g~l~~~e~G~  248 (450)
T d1crua_         185 QELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG--HRNPQGLAFTP-NGKLLQSEQGP  248 (450)
T ss_dssp             HHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC--CSEEEEEEECT-TSCEEEEEECS
T ss_pred             ccccccccccccCceEEeeccccccccccccccccceEEEec--cccccceeecc-cceeeeccccc
Confidence                      137899999988742           334443  88999999998 58999998763

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.82  E-value=2.1e-06  Score=65.55  Aligned_cols=209  Identities=10%  Similarity=-0.014  Sum_probs=130.8

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-----CCCccEEEEeecCCeEEEEeCC-----------C
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-----IRSPEGLTFDWVNRVLYWTDSQ-----------M   65 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-----~~~p~gl~~d~~~~~ly~~d~~-----------~   65 (232)
                      |.++++++..+.||++...++ .|..+++........+...     ...+.++++.+.++.+|++...           .
T Consensus        36 ~~~i~~spDg~~l~v~~~~~~-~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~  114 (337)
T d1pbyb_          36 PMVPMVAPGGRIAYATVNKSE-SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP  114 (337)
T ss_dssp             CCCEEECTTSSEEEEEETTTT-EEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred             ccEEEECCCCCEEEEEECCCC-eEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccc
Confidence            567899998889999988777 8999999865433322211     2467899999999999988642           3


Q ss_pred             CeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCC-----CCCc-EEEEeC---------------------
Q psy5751          66 DTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNR-----SGPK-IEWSNL---------------------  118 (232)
Q Consensus        66 ~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~-----~~~~-I~~~~~---------------------  118 (232)
                      ..+...+.........+. ....|.++++++.+..+|.+....     ...+ +.....                     
T Consensus       115 ~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (337)
T d1pbyb_         115 TRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHE  193 (337)
T ss_dssp             CEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCT
T ss_pred             cceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEcCCcceeeeecCcEEEEeecCCccccceecCCcceeecccc
Confidence            466667776655444444 345788999999888888764210     0001 111111                     


Q ss_pred             ---------------------------------CCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCC
Q psy5751         119 ---------------------------------DGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNR  165 (232)
Q Consensus       119 ---------------------------------~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~  165 (232)
                                                       ................+..+++++....+|..+   +.|..+++...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~v~d~~~~  270 (337)
T d1pbyb_         194 SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY---NVLESFDLEKN  270 (337)
T ss_dssp             TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE---SEEEEEETTTT
T ss_pred             ccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEcc---ccEEEEECCCC
Confidence                                             000000000000123445566777766776664   56788888766


Q ss_pred             ceEEEecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCC
Q psy5751         166 VRRKVYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE-GERAPSIALDMMG  216 (232)
Q Consensus       166 ~~~~~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~  216 (232)
                      +..........|.++++.  +.+||++.. .+.|..++.. ++....+..+..+
T Consensus       271 ~~~~~~~~~~~~~~~~~s~dG~~l~v~~~-~~~i~v~D~~t~~~v~~i~~~g~~  323 (337)
T d1pbyb_         271 ASIKRVPLPHSYYSVNVSTDGSTVWLGGA-LGDLAAYDAETLEKKGQVDLPGNA  323 (337)
T ss_dssp             EEEEEEECSSCCCEEEECTTSCEEEEESB-SSEEEEEETTTCCEEEEEECGGGC
T ss_pred             cEEEEEcCCCCEEEEEECCCCCEEEEEeC-CCcEEEEECCCCcEEEEEECCCCC
Confidence            544444455668899994  667888765 4679999987 5666677766544

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=98.81  E-value=3.5e-07  Score=74.53  Aligned_cols=156  Identities=14%  Similarity=0.187  Sum_probs=108.2

Q ss_pred             EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CC-C------CCceEEEEeCC---CCeEEEEE
Q psy5751          37 DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KD-L------VNPRGIVVHPY---YRKLFWSD  105 (232)
Q Consensus        37 ~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~-~------~~p~~iavd~~---~~~ly~~d  105 (232)
                      +++..++..|.+|++.+ .++||+++...++|.+++.++...+.+.. .. .      ....+||+||.   ++.+|++.
T Consensus        20 ~~ia~~L~~P~~la~~p-dg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsy   98 (450)
T d1crua_          20 KVILSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG   98 (450)
T ss_dssp             EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred             EEEECCCCCceEEEEeC-CCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEE
Confidence            56667899999999998 56799999888999999987776665554 11 1      23358999973   69999864


Q ss_pred             cCC-------C---CCcEEEEeCCCCCc-----EEEEEcC---CCCCcceEEEeCCCCEEEEEECC--------------
Q psy5751         106 WNR-------S---GPKIEWSNLDGTDR-----EIFLKAA---DLKLPNSLAVDFRTDELCWVDAD--------------  153 (232)
Q Consensus       106 ~~~-------~---~~~I~~~~~~g~~~-----~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~~--------------  153 (232)
                      ...       .   ...+.+...+....     +.++...   .-+.-..|+++++ ++||++-..              
T Consensus        99 t~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpD-G~LYvs~Gd~~~~~~~~~~~~~~  177 (450)
T d1crua_          99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGDQGRNQLAYLFLPNQ  177 (450)
T ss_dssp             EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECCTTTTSGGGTTSCCC
T ss_pred             ecCCCCCcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCC-CCEEEEecCCCcccccccccccc
Confidence            210       0   11244444444332     2222221   1245568999996 789998431              


Q ss_pred             ------------------CCcEEEEecCCCce-----------EEEecCCCceEEEEEE-CCEEEEEeCCC
Q psy5751         154 ------------------SKSLECMTIRNRVR-----------RKVYSNCTYPFGLSIT-DEKYYWTDWKT  194 (232)
Q Consensus       154 ------------------~~~i~~~~~~g~~~-----------~~~~~~~~~p~gla~~-~~~ly~td~~~  194 (232)
                                        .++|.|++.+|...           ++++..+..|.+++++ ++.||.+|.+.
T Consensus       178 ~~~~~~~~~~~~q~~~~~~Gkilri~~dg~~~~dnP~~~~~~~ei~a~G~RNp~g~~~~p~g~l~~~e~G~  248 (450)
T d1crua_         178 AQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGP  248 (450)
T ss_dssp             TTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEECS
T ss_pred             cccCcccccccccccccccCceEEeeccccccccccccccccceEEEeccccccceeecccceeeeccccc
Confidence                              37899999987632           4567799999999997 78999998754

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.78  E-value=1.8e-05  Score=63.34  Aligned_cols=191  Identities=10%  Similarity=0.056  Sum_probs=132.7

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCc
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNP   89 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p   89 (232)
                      .+.++++...++ +|..+++........+..+ ..|.++++.+.++.||.+... +.|.+.+++......+.. .....|
T Consensus        31 ~~~~~V~~~~dg-~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d-~~v~vwd~~t~~~~~~~~i~~~~~~  107 (426)
T d1hzua2          31 PNLFSVTLRDAG-QIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIKIGIEA  107 (426)
T ss_dssp             GGEEEEEETTTT-EEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEECCSEE
T ss_pred             CeEEEEEEcCCC-EEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCC-CCEEEEEccCCceeEEEEEeCCCCC
Confidence            345567777777 9999999876654455444 579999999999999988754 689999998776554443 345578


Q ss_pred             eEEEEeC----CCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC----------CCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          90 RGIVVHP----YYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA----------DLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        90 ~~iavd~----~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~----------~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      .++++++    .+++||.+...  ...+...+.............          .-..+..++..+++..++++....+
T Consensus       108 ~~~~~s~~~spDG~~l~v~~~~--~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~  185 (426)
T d1hzua2         108 RSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG  185 (426)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             cceEEeeeecCCCCEEEEeecC--CCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCC
Confidence            8888764    46778887654  345666666655543333211          0223456777888888899988888


Q ss_pred             cEEEEecCCCceEE--EecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         156 SLECMTIRNRVRRK--VYSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       156 ~i~~~~~~g~~~~~--~~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      .+..+.........  .......|.++++.  +.++|++....+.+..++.....
T Consensus       186 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~  240 (426)
T d1hzua2         186 KVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRR  240 (426)
T ss_dssp             EEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTE
T ss_pred             eEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeeccccc
Confidence            88888776543322  23466778999984  67889988888888888776333

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.77  E-value=1.3e-06  Score=70.44  Aligned_cols=190  Identities=13%  Similarity=0.053  Sum_probs=126.6

Q ss_pred             CCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeE------------------E
Q psy5751           9 CVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTI------------------S   69 (232)
Q Consensus         9 ~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I------------------~   69 (232)
                      +...+||++|..++ +|.+++++.....+++. +....|.|+++.+.++.+|++......+                  .
T Consensus        81 pDGr~lfV~d~~~~-rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~  159 (441)
T d1qnia2          81 YDGKYLFINDKANT-RVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFT  159 (441)
T ss_dssp             EEEEEEEEEETTTT-EEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEE
T ss_pred             CCCCEEEEEcCCCC-EEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEE
Confidence            34678999999999 99999999776655554 4467999999998889999886544333                  3


Q ss_pred             EEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCC------------cEEEEe--------------------
Q psy5751          70 MANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGP------------KIEWSN--------------------  117 (232)
Q Consensus        70 ~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~------------~I~~~~--------------------  117 (232)
                      ..|........-+. -...|.+++++|..+++|++..+.+..            .|...+                    
T Consensus       160 ~iD~~t~~v~~qI~-v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~  238 (441)
T d1qnia2         160 AIDAETMDVAWQVI-VDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSK  238 (441)
T ss_dssp             EEETTTCSEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred             eecCccceeeEEEe-cCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCC
Confidence            34544433221111 124799999999999999997653211            111111                    


Q ss_pred             ------CCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCC-------C--ceEEE-ec--CCCceEE
Q psy5751         118 ------LDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRN-------R--VRRKV-YS--NCTYPFG  179 (232)
Q Consensus       118 ------~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g-------~--~~~~~-~~--~~~~p~g  179 (232)
                            .........+..  -..|.|+.++++++++|++....+.|..++++.       .  .+..+ .+  ..-.|..
T Consensus       239 v~vvd~~~~~~v~~~IPv--gksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh  316 (441)
T d1qnia2         239 VPVVDGRGESEFTRYIPV--PKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLH  316 (441)
T ss_dssp             CCEEECSSSCSSEEEECC--BSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEE
T ss_pred             cEEEEcccCCceEEEEeC--CCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCccc
Confidence                  111111111111  457999999999999999999999999999752       1  01112 22  2334666


Q ss_pred             EEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         180 LSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       180 la~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      -+++ .++.|-+.+....|.+-+.
T Consensus       317 ~~fd~~g~~yts~~~ds~v~kw~~  340 (441)
T d1qnia2         317 TTFDGRGNAYTTLFIDSQVCKWNI  340 (441)
T ss_dssp             EEECSSSEEEEEETTTTEEEEEEH
T ss_pred             ceecCCceEEEcccccceEEEecc
Confidence            6776 6889999988888888874

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.70  E-value=1.3e-06  Score=70.45  Aligned_cols=148  Identities=7%  Similarity=-0.015  Sum_probs=99.4

Q ss_pred             ecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCCC----------------cEEE
Q psy5751          53 WVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSGP----------------KIEW  115 (232)
Q Consensus        53 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~~----------------~I~~  115 (232)
                      +.++.||++|..+++|.++|++......++. .....|.++++.+..+++|++.......                .+..
T Consensus        81 pDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~  160 (441)
T d1qnia2          81 YDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTA  160 (441)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEE
T ss_pred             CCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEe
Confidence            4588999999999999999999877666665 4577999999999889999886542210                1122


Q ss_pred             EeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE--------------------------------------
Q psy5751         116 SNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL--------------------------------------  157 (232)
Q Consensus       116 ~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i--------------------------------------  157 (232)
                      .+.......--+..  -..|.+++++++++++|++......+                                      
T Consensus       161 iD~~t~~v~~qI~v--~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~  238 (441)
T d1qnia2         161 IDAETMDVAWQVIV--DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSK  238 (441)
T ss_dssp             EETTTCSEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred             ecCccceeeEEEec--CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCC
Confidence            33333222211222  34799999999999999996543211                                      


Q ss_pred             -EEEec-CCCceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeC
Q psy5751         158 -ECMTI-RNRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       158 -~~~~~-~g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~  202 (232)
                       ..++. ..............|+|+++  ++.++|++...++.|..++.
T Consensus       239 v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~  287 (441)
T d1qnia2         239 VPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAI  287 (441)
T ss_dssp             CCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEG
T ss_pred             cEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEe
Confidence             11111 11111112223567999999  46789999999999999994

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.65  E-value=6.2e-07  Score=70.58  Aligned_cols=213  Identities=8%  Similarity=0.013  Sum_probs=127.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      |.+++|.+..++||+++...+ .+..+++........+...    .+..+.+..+..+++....+.+...++........
T Consensus       126 p~~~a~SpDGk~l~va~~~~~-~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~  200 (368)
T d1mdah_         126 VHIIGNCASSACLLFFLFGSS-AAAGLSVPGASDDQLTKSA----SCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG  200 (368)
T ss_dssp             TTSEEECTTSSCEEEEECSSS-CEEEEEETTTEEEEEEECS----SCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred             ccceEECCCCCEEEEEeCCCC-eEEEEECCCCcEeEEeecc----CcceEccCCCceEEEEcCCCCEEEEEecCCceeee
Confidence            345789998999999998888 8999999876654443321    11111222344555655666666666554443222


Q ss_pred             Ee------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC-----------CCCcceEEEeCCC
Q psy5751          82 VS------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD-----------LKLPNSLAVDFRT  144 (232)
Q Consensus        82 ~~------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~-----------~~~p~~l~~d~~~  144 (232)
                      ..      .....+.....++ .+.++++..    ++++..++++.....+.....           -..+..++++++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~  275 (368)
T d1mdah_         201 IVGAQCTGAQNCSSQAAQANY-PGMLVWAVA----SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT  275 (368)
T ss_dssp             ECCCCSCTTSCBCSCCEEETT-TTEEEECBS----SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred             eeecccccccccceeeccccc-CcEEEEecC----CCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCC
Confidence            21      1122334455554 455555442    235555555444333221110           1234678999999


Q ss_pred             CEEEEEECC--------CCcEEEEecCCCceEEEecCCCceEEEEEE-CC--EEEEEeCCCCcEEEEeCC-CCCcceEEe
Q psy5751         145 DELCWVDAD--------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DE--KYYWTDWKTNRIESANKE-GERAPSIAL  212 (232)
Q Consensus       145 ~~Ly~~d~~--------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~--~ly~td~~~~~i~~~~~~-g~~~~~i~~  212 (232)
                      +.+|++...        ..+|+.++....++.........|.++++. ++  .||.+....+.|..++.. |+....+.+
T Consensus       276 ~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~  355 (368)
T d1mdah_         276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL  355 (368)
T ss_dssp             TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred             CEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEEC
Confidence            999998533        236888888876543333333457788884 33  589999999999999976 554444432


Q ss_pred             ccCCcceeEEEEEEcC
Q psy5751         213 DMMGTTYMYGIAAVPS  228 (232)
Q Consensus       213 ~~~~~~~p~gi~~~~~  228 (232)
                          ...|.+|+|.+.
T Consensus       356 ----g~~P~~l~~~~~  367 (368)
T d1mdah_         356 ----DKGPESLSVQNE  367 (368)
T ss_dssp             ----CSCCCEEECCCC
T ss_pred             ----CCCCCEEEEecC
Confidence                446999998653

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.63  E-value=8.6e-06  Score=65.66  Aligned_cols=166  Identities=8%  Similarity=-0.038  Sum_probs=118.0

Q ss_pred             CeEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEee----cCCeEEEEeCCCCeEEEEeCCC
Q psy5751           1 MLIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDW----VNRVLYWTDSQMDTISMANLND   75 (232)
Q Consensus         1 ~~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~----~~~~ly~~d~~~~~I~~~~~~g   75 (232)
                      .|.+++|.+..+.||.++. ++ .|..+++.......+.. .....+.++++..    .++.||++....+.|...|..+
T Consensus        63 ~~~~v~fSpDG~~l~~~s~-dg-~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t  140 (432)
T d1qksa2          63 AVHISRLSASGRYLFVIGR-DG-KVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET  140 (432)
T ss_dssp             CEEEEEECTTSCEEEEEET-TS-EEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred             CeeEEEECCCCCEEEEEcC-CC-CEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcc
Confidence            3789999999999998874 45 79999987544322211 2235778887753    5788999998889999999887


Q ss_pred             CCCEEEEeC-----------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751          76 DQPKVIVSK-----------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT  144 (232)
Q Consensus        76 ~~~~~~~~~-----------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~  144 (232)
                      .........           ...++.+++.++.+..++++...  .++|...+........+........|.++++++++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~--~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg  218 (432)
T d1qksa2         141 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE--TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH  218 (432)
T ss_dssp             CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT--TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred             ccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEcc--CCeEEEEEccCCCcceEEEEcccCccccceECCCC
Confidence            665443321           23455678888877888888765  56788888765443222221114679999999998


Q ss_pred             CEEEEEECCCCcEEEEecCCCceEEE
Q psy5751         145 DELCWVDADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~~~~  170 (232)
                      .++|++....+.+..++.+.......
T Consensus       219 ~~~~va~~~~~~v~v~d~~~~~~~~~  244 (432)
T d1qksa2         219 RYFITAANARNKLVVIDTKEGKLVAI  244 (432)
T ss_dssp             CEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred             CEEEEeccccceEEEeecccceEEEE
Confidence            89999988888999999887655433

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.53  E-value=9.2e-05  Score=57.37  Aligned_cols=215  Identities=9%  Similarity=-0.007  Sum_probs=122.7

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++.+.+....+|+........+...+......   . .....|.++++.+.++.+|++....+.+.+.+..+.......
T Consensus       128 ~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~  203 (373)
T d2madh_         128 WMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD---D-QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGL  203 (373)
T ss_pred             CcEEEEeCCCcEEEEEEcCCCceEEeeccCCeE---E-EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEE
Confidence            345666666666666544331344444433221   1 123467888998888899999999899999988776544332


Q ss_pred             e----CCCCC--ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-----------CCCCcceEEEeCCCC
Q psy5751          83 S----KDLVN--PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-----------DLKLPNSLAVDFRTD  145 (232)
Q Consensus        83 ~----~~~~~--p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-----------~~~~p~~l~~d~~~~  145 (232)
                      .    .....  +..++.++ .+.+.+...   ..++...+..+..........           .-..+..++++++..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  279 (373)
T d2madh_         204 VGAMLTAAQNLLTQPAQANK-SGRIVWPVY---SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD  279 (373)
T ss_pred             eeeccccCccceeeeEEECC-CceEEEecC---CceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCC
Confidence            2    11122  23344443 222222221   234555555443322111110           012345677788777


Q ss_pred             EEEEEEC---------CCCcEEEEecCCCceEEEecCCCceEEEEEE-C-CE-EEEEeCCCCcEEEEeCC-CCCcceEEe
Q psy5751         146 ELCWVDA---------DSKSLECMTIRNRVRRKVYSNCTYPFGLSIT-D-EK-YYWTDWKTNRIESANKE-GERAPSIAL  212 (232)
Q Consensus       146 ~Ly~~d~---------~~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~-~~-ly~td~~~~~i~~~~~~-g~~~~~i~~  212 (232)
                      ++|+...         ..+.+..++....+..........|.++++. + .. ||++....+.|..++.. |+..+.+..
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~  359 (373)
T d2madh_         280 GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVE  359 (373)
T ss_pred             eEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECC
Confidence            7877643         2456777777665544444455668899983 3 33 67888888999999987 555555532


Q ss_pred             ccCCcceeEEEEEEcC
Q psy5751         213 DMMGTTYMYGIAAVPS  228 (232)
Q Consensus       213 ~~~~~~~p~gi~~~~~  228 (232)
                         .-..|..|++.++
T Consensus       360 ---~g~~P~~l~~~~~  372 (373)
T d2madh_         360 ---LGSGPQVLSVMNE  372 (373)
T ss_pred             ---CCCCCcEEEEecC
Confidence               2346888988654

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.49  E-value=9.8e-05  Score=56.37  Aligned_cols=195  Identities=7%  Similarity=-0.035  Sum_probs=124.5

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--EE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--KV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~   80 (232)
                      ..+++++.++.|+++.  ++ .|...+++......++......+..+++.+.++.| .+-...+.|...++.....  ..
T Consensus        21 ~~~a~~~~g~~l~~~~--~~-~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~l-atg~~dg~i~iwd~~~~~~~~~~   96 (311)
T d1nr0a1          21 VVLGNTPAGDKIQYCN--GT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTHILKT   96 (311)
T ss_dssp             CCCEECTTSSEEEEEE--TT-EEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTCCEEE
T ss_pred             EEEEEcCCCCEEEEEe--CC-EEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeE-eccccCceEeeeeeecccccccc
Confidence            4578899899988875  34 78888888665555665545788999999865555 4555568899999877653  23


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      .+.........+++++.+..|..+..+. ...+...+++.......+... ......+++++++..++++-...+.|...
T Consensus        97 ~~~~~~~~v~~v~~s~d~~~l~~~~~~~-~~~~~v~~~~~~~~~~~l~~h-~~~v~~v~~~~~~~~~l~sgs~d~~i~i~  174 (311)
T d1nr0a1          97 TIPVFSGPVKDISWDSESKRIAAVGEGR-ERFGHVFLFDTGTSNGNLTGQ-ARAMNSVDFKPSRPFRIISGSDDNTVAIF  174 (311)
T ss_dssp             EEECSSSCEEEEEECTTSCEEEEEECCS-SCSEEEEETTTCCBCBCCCCC-SSCEEEEEECSSSSCEEEEEETTSCEEEE
T ss_pred             ccccccCccccccccccccccccccccc-ccccccccccccccccccccc-ccccccccccccceeeecccccccccccc
Confidence            3444455678999998655555554322 233555666544322212211 34567899999877777776667888888


Q ss_pred             ecCCCceEEEecC-CCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         161 TIRNRVRRKVYSN-CTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       161 ~~~g~~~~~~~~~-~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +++..+....... ......+++. .+.++.+-...+.|...+..
T Consensus       175 d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~  219 (311)
T d1nr0a1         175 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV  219 (311)
T ss_dssp             ETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             cccccccccccccccccccccccCccccccccccccccccccccc
Confidence            8887655444433 3334677774 44444444445667777655

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.48  E-value=3.4e-05  Score=61.64  Aligned_cols=180  Identities=8%  Similarity=-0.041  Sum_probs=118.5

Q ss_pred             CCccEEEEeec-CCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy5751          44 RSPEGLTFDWV-NRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD  122 (232)
Q Consensus        44 ~~p~gl~~d~~-~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~  122 (232)
                      ..|..+.++.. .+.++++....+.|.+.|+........+... ..|.+++++|.+++||.+...   +.|...+++...
T Consensus        19 ~~p~~~~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d---~~v~vwd~~t~~   94 (426)
T d1hzua2          19 DRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRD---ARIDMIDLWAKE   94 (426)
T ss_dssp             GSCSSCCSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETT---SEEEEEETTSSS
T ss_pred             cCCCcccccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCC---CCEEEEEccCCc
Confidence            34444444443 3455678888999999999887765555533 579999999988888887643   468889988776


Q ss_pred             cEEEEEcCCCCCcceEEEeC----CCCEEEEEECCCCcEEEEecCCCceEEEec------------CCCceEEEEE--EC
Q psy5751         123 REIFLKAADLKLPNSLAVDF----RTDELCWVDADSKSLECMTIRNRVRRKVYS------------NCTYPFGLSI--TD  184 (232)
Q Consensus       123 ~~~~~~~~~~~~p~~l~~d~----~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~------------~~~~p~gla~--~~  184 (232)
                      ............|.++++++    ++.+||++....+.+...+...........            ....+..++.  +.
T Consensus        95 ~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~  174 (426)
T d1hzua2          95 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH  174 (426)
T ss_dssp             CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred             eeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCC
Confidence            55443322255678887764    678899998888888888887665443321            1122334444  36


Q ss_pred             CEEEEEeCCCCcEEEEeCCC-CCcceEEeccCCcceeEEEEEEcCC
Q psy5751         185 EKYYWTDWKTNRIESANKEG-ERAPSIALDMMGTTYMYGIAAVPSS  229 (232)
Q Consensus       185 ~~ly~td~~~~~i~~~~~~g-~~~~~i~~~~~~~~~p~gi~~~~~~  229 (232)
                      ..++++....+.+..+.... .....-..  .....|.++++.++.
T Consensus       175 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g  218 (426)
T d1hzua2         175 PEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLADGGWDSSH  218 (426)
T ss_dssp             SEEEEEETTTTEEEEEECSSSSSCEEEEE--ECCSSEEEEEECTTS
T ss_pred             CEEEEecCCCCeEEEEEeccccceeeEEe--ccCCccEeeeECCCC
Confidence            68888888888887777653 33332222  224467888776654

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.43  E-value=3.7e-05  Score=59.02  Aligned_cols=179  Identities=7%  Similarity=0.037  Sum_probs=121.2

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-CeEEEEeCCCCCCEEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-DTISMANLNDDQPKVIV   82 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-~~I~~~~~~g~~~~~~~   82 (232)
                      +-+|.+.++.++.+.. .+ +|+.+++++....++  ..-..+.++++.+.++.|+++.... ..|++.+.++...+.+.
T Consensus         7 ~~~fSP~dG~~~a~~~-~g-~v~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~   82 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RG-QAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFE   82 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TT-EEEEECTTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECC
T ss_pred             cccccCCCCCEEEEEE-CC-eEEEEECCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEee
Confidence            4578875555554443 34 799999988765443  2345788999999888888765444 46888899887655444


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC---------
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD---------  153 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~---------  153 (232)
                       ........++++|....|..+..   ...++..++++.......... ......+++.+++..|.++...         
T Consensus        83 -~~~~~v~~~~~spdg~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~la~~~~~~~~~~~~~~  157 (360)
T d1k32a3          83 -ENLGNVFAMGVDRNGKFAVVAND---RFEIMTVDLETGKPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYV  157 (360)
T ss_dssp             -CCCCSEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred             -CCCceEEeeeecccccccceecc---ccccccccccccceeeeeecc-cccccchhhccceeeeeeeccccccceeecc
Confidence             35667789999997777776664   456888999888776666654 5567889999998888877432         


Q ss_pred             CCcEEEEecCCCceEEEecCCCceEEEEE--ECCEEEEEe
Q psy5751         154 SKSLECMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTD  191 (232)
Q Consensus       154 ~~~i~~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td  191 (232)
                      .+.+...+..+.....+........++++  ++..|+++-
T Consensus       158 ~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s  197 (360)
T d1k32a3         158 MQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLS  197 (360)
T ss_dssp             EEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred             ccceeeeccccCceeeecccccccccccccCCCCEEEEEe
Confidence            23466677776655544444444455666  345666553

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.37  E-value=4.7e-06  Score=63.81  Aligned_cols=100  Identities=8%  Similarity=0.021  Sum_probs=70.8

Q ss_pred             EEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe
Q psy5751           5 ITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS   83 (232)
Q Consensus         5 i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~   83 (232)
                      +++.+. +..+++.-.++ .|..++++.......+. +.-..|.++++.+.++.+|++....+.|.+.|+..........
T Consensus         2 ~a~~~~-~~~l~~~~~~~-~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~   79 (346)
T d1jmxb_           2 PALKAG-HEYMIVTNYPN-NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   79 (346)
T ss_dssp             CCCCTT-CEEEEEEETTT-EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccCCCC-CcEEEEEcCCC-EEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeec
Confidence            456664 44444444556 79999998665433332 3346799999999899999999988999999988765433333


Q ss_pred             CC------CCCceEEEEeCCCCeEEEEEc
Q psy5751          84 KD------LVNPRGIVVHPYYRKLFWSDW  106 (232)
Q Consensus        84 ~~------~~~p~~iavd~~~~~ly~~d~  106 (232)
                      ..      ...|.+++++|.+++||++..
T Consensus        80 ~~~~~~~~~~~~~~v~~s~DG~~l~v~~~  108 (346)
T d1jmxb_          80 LSSVPGEVGRSMYSFAISPDGKEVYATVN  108 (346)
T ss_dssp             SCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred             ccccccccCCceEEEEEecCCCEEEEEec
Confidence            11      135789999998889998863

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.33  E-value=0.00011  Score=55.66  Aligned_cols=144  Identities=13%  Similarity=0.081  Sum_probs=96.0

Q ss_pred             EEEEcCCCCcEEEEEcCCCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCC-----CC
Q psy5751          15 YYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKD-----LV   87 (232)
Q Consensus        15 y~~d~~~~~~i~~~~~~g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-----~~   87 (232)
                      +++...++ +|..+++........+.  .....|.++++.+.++.||++....+.|.++|+............     ..
T Consensus         4 ~vt~~~d~-~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~   82 (337)
T d1pbyb_           4 ILAPARPD-KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK   82 (337)
T ss_dssp             EEEEETTT-EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred             EEEEcCCC-EEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccccc
Confidence            34444555 78888887655433332  223578999999988999999988899999999876644333311     23


Q ss_pred             CceEEEEeCCCCeEEEEEcCC---------CCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          88 NPRGIVVHPYYRKLFWSDWNR---------SGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        88 ~p~~iavd~~~~~ly~~d~~~---------~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                      .+.+++++|..+.+|++....         ....+...+.........+..  ...|.++++++++.++|.+.   +.+.
T Consensus        83 ~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~---~~~~  157 (337)
T d1pbyb_          83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGLG---RDLH  157 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEES---SSEE
T ss_pred             ceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc--cCCceEEEEcCCCCEEEEEc---CCcc
Confidence            567899999899999886321         134455565554443333333  56799999999999999874   2344


Q ss_pred             EEecCC
Q psy5751         159 CMTIRN  164 (232)
Q Consensus       159 ~~~~~g  164 (232)
                      .++...
T Consensus       158 ~~d~~~  163 (337)
T d1pbyb_         158 VMDPEA  163 (337)
T ss_dssp             EEETTT
T ss_pred             eeeeec
Confidence            444443

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.33  E-value=0.00031  Score=54.21  Aligned_cols=158  Identities=8%  Similarity=-0.038  Sum_probs=105.0

Q ss_pred             EEEEEeCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC---------CCeEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ---------MDTISM   70 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~---------~~~I~~   70 (232)
                      .++++.+...++|+++....   .+++.++.........+..  ..+.++++.+.++.||++...         .+.|.+
T Consensus        24 ~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~--~~~~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v  101 (373)
T d2madh_          24 NDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--GFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEV  101 (373)
T ss_pred             cccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeC--CCCccEEEcCCCCEEEEEeecCCcccccccceEEEE
Confidence            35677888899999876442   2688888765443333332  234479999999999998754         356788


Q ss_pred             EeCCCCCCEEEEe-C------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCC
Q psy5751          71 ANLNDDQPKVIVS-K------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFR  143 (232)
Q Consensus        71 ~~~~g~~~~~~~~-~------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~  143 (232)
                      .|.........+. .      ....|.++++.+.++.+|+..+.. ...+...+....  +....   ...|.++.+.++
T Consensus       102 ~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-~~~~~~~~~~~~--~~~~~---~~~~~~~~~s~~  175 (373)
T d2madh_         102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GPAVGLVVQGGS--SDDQL---LSSPTCYHIHPG  175 (373)
T ss_pred             EECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcC-CCceEEeeccCC--eEEEE---eccceeEEEecC
Confidence            8877665432222 1      234577888888888888776553 233444444332  22211   446889999999


Q ss_pred             CCEEEEEECCCCcEEEEecCCCceE
Q psy5751         144 TDELCWVDADSKSLECMTIRNRVRR  168 (232)
Q Consensus       144 ~~~Ly~~d~~~~~i~~~~~~g~~~~  168 (232)
                      +..+|++....+.+...+.++....
T Consensus       176 g~~~~v~~~~dg~~~~~~~~~~~~~  200 (373)
T d2madh_         176 APSTFYLLCAQGGLAKTDHAGGAAG  200 (373)
T ss_pred             CCcEEEEEcCCCeEEEEEcCCceee
Confidence            8899999999999999888765443

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=98.32  E-value=0.00034  Score=54.41  Aligned_cols=188  Identities=10%  Similarity=0.076  Sum_probs=112.6

Q ss_pred             CCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEee------cC-CeEEEEeCC--CCeEEEEeCCCCCCE-
Q psy5751          10 VEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDW------VN-RVLYWTDSQ--MDTISMANLNDDQPK-   79 (232)
Q Consensus        10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~------~~-~~ly~~d~~--~~~I~~~~~~g~~~~-   79 (232)
                      ....++-+|...  .|+.++++|...+.+   ....++.|.+-.      .. ..++.++..  +..|.....++.... 
T Consensus        39 ~~SlI~gTdK~~--Gl~vYdL~G~~l~~~---~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          39 QNSKLITTNKKS--GLAVYSLEGKMLHSY---HTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             GGCEEEEEETTS--CCEEEETTCCEEEEC---CSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             CccEEEEEcCcC--CEEEEcCCCcEEEec---ccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            345666666543  499999998765332   234666655542      11 234556654  345555544433221 


Q ss_pred             -EE------EeCCCCCceEEEE--eCCCCeEEEEEcCCCCCcEEEEeC--CCCC-c-EEEE-EcCCCCCcceEEEeCCCC
Q psy5751          80 -VI------VSKDLVNPRGIVV--HPYYRKLFWSDWNRSGPKIEWSNL--DGTD-R-EIFL-KAADLKLPNSLAVDFRTD  145 (232)
Q Consensus        80 -~~------~~~~~~~p~~iav--d~~~~~ly~~d~~~~~~~I~~~~~--~g~~-~-~~~~-~~~~~~~p~~l~~d~~~~  145 (232)
                       .+      ....+..+.|+++  ++..+.+|..-... .+++....+  ++.. . ..++ ....-.++.|+.+|..++
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k-~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~  192 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGK-EGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYG  192 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcC-CceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCC
Confidence             11      1124557889998  77778776554432 455655443  3332 1 1111 111245788999999999


Q ss_pred             EEEEEECCCCcEEEEecC--C-CceEEEec-----CCCceEEEEEE-----CCEEEEEeCCCCcEEEEeCCC
Q psy5751         146 ELCWVDADSKSLECMTIR--N-RVRRKVYS-----NCTYPFGLSIT-----DEKYYWTDWKTNRIESANKEG  204 (232)
Q Consensus       146 ~Ly~~d~~~~~i~~~~~~--g-~~~~~~~~-----~~~~p~gla~~-----~~~ly~td~~~~~i~~~~~~g  204 (232)
                      +||+++... .||+++.+  + ...+.+..     ...-|.||+++     +++|.+++-+.++...+++.+
T Consensus       193 ~LyisEE~~-Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~  263 (353)
T d1h6la_         193 SLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQG  263 (353)
T ss_dssp             EEEEEETTT-EEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred             cEEEecCcc-ceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCC
Confidence            999998854 68998876  2 23333322     23568899974     468999988888888887764

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=98.27  E-value=2.6e-05  Score=59.46  Aligned_cols=61  Identities=13%  Similarity=-0.088  Sum_probs=47.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC------CCCccEEEEeecCCeEEEEeC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN------IRSPEGLTFDWVNRVLYWTDS   63 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~------~~~p~gl~~d~~~~~ly~~d~   63 (232)
                      |.++++++....+|+++..++ .|..+++............      ...|.++++.+.++.+|+++.
T Consensus        42 p~~l~~spDG~~l~v~~~~~~-~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~  108 (346)
T d1jmxb_          42 PGTAMMAPDNRTAYVLNNHYG-DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN  108 (346)
T ss_dssp             SCEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred             cceEEECCCCCEEEEEECCCC-cEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEec
Confidence            568999998889999998888 9999999865433222221      136889999999999999864

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.13  E-value=0.00071  Score=51.60  Aligned_cols=215  Identities=12%  Similarity=0.053  Sum_probs=118.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-------CCCccEEEEeecCCeEEEEeCCCCeEEEEeCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-------IRSPEGLTFDWVNRVLYWTDSQMDTISMANLN   74 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-------~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~   74 (232)
                      |.+++|.+..+.+|+++......+...+.........+...       ......+++...+..+++.....+.+...+..
T Consensus       108 ~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~  187 (355)
T d2bbkh_         108 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE  187 (355)
T ss_dssp             GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC
T ss_pred             CceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecc
Confidence            34578899899999988765425666666654432222211       12333455555556666665555544444433


Q ss_pred             CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC--------C---CCCcceEEEeCC
Q psy5751          75 DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA--------D---LKLPNSLAVDFR  143 (232)
Q Consensus        75 g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~--------~---~~~p~~l~~d~~  143 (232)
                      .....     ........+..+..+.+.++..   .++++..++++.....+....        .   -..+..++++++
T Consensus       188 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d  259 (355)
T d2bbkh_         188 VFHPE-----DEFLINHPAYSQKAGRLVWPTY---TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA  259 (355)
T ss_dssp             CCSCT-----TSCBCSCCEEETTTTEEEEEBT---TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT
T ss_pred             cccce-----ecceeeeccccCCCCeEEEecC---CCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCC
Confidence            22110     0000112233333455555442   234666666554433221110        0   123456899999


Q ss_pred             CCEEEEEECC---------CCcEEEEecCCCceEEEecCCCceEEEEEE-CC--EEEEEeCCCCcEEEEeCC-CCCcceE
Q psy5751         144 TDELCWVDAD---------SKSLECMTIRNRVRRKVYSNCTYPFGLSIT-DE--KYYWTDWKTNRIESANKE-GERAPSI  210 (232)
Q Consensus       144 ~~~Ly~~d~~---------~~~i~~~~~~g~~~~~~~~~~~~p~gla~~-~~--~ly~td~~~~~i~~~~~~-g~~~~~i  210 (232)
                      +..+|++...         ...|..++....+...-......|.++++. ++  .||++....+.|..++.. |+..+.+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i  339 (355)
T d2bbkh_         260 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV  339 (355)
T ss_dssp             TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEE
Confidence            9999998542         246888888765543333334557888984 33  478888888999999986 5555544


Q ss_pred             EeccCCcceeEEEEEEc
Q psy5751         211 ALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       211 ~~~~~~~~~p~gi~~~~  227 (232)
                      ...   -..|.-|++..
T Consensus       340 ~~~---G~~p~~i~~~d  353 (355)
T d2bbkh_         340 NQL---GHGPQVITTAD  353 (355)
T ss_dssp             CCC---CSSCCEEECCC
T ss_pred             eCc---CCCccEEEeCC
Confidence            321   23566666543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.10  E-value=8.4e-05  Score=57.07  Aligned_cols=192  Identities=9%  Similarity=-0.048  Sum_probs=114.4

Q ss_pred             eCCCCEEEEEEcCCC---CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC---------CCeEEEEeCCC
Q psy5751           8 DCVEGQVYYSSVADK---SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ---------MDTISMANLND   75 (232)
Q Consensus         8 d~~~~~ly~~d~~~~---~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~---------~~~I~~~~~~g   75 (232)
                      .+...++|+++....   ..|+.++.........+..+  ...++++.+.++.||+++..         .+.|.++|+..
T Consensus        10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t   87 (355)
T d2bbkh_          10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT   87 (355)
T ss_dssp             CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECC--CCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCC
Confidence            467789999985432   26999998865543333332  33479999999999998642         35788889877


Q ss_pred             CCCEEEEe-------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------CCCCcceEEEeC
Q psy5751          76 DQPKVIVS-------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------DLKLPNSLAVDF  142 (232)
Q Consensus        76 ~~~~~~~~-------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~~~~p~~l~~d~  142 (232)
                      ......+.       .....|.++++++.++++|++.... ...+...+.........+...      ....+..+++.+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (355)
T d2bbkh_          88 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCR  166 (355)
T ss_dssp             CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS-SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET
T ss_pred             CCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCC-CceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcC
Confidence            66443332       1245688999999999999987653 345556666544322222211      012345678888


Q ss_pred             CCCEEEEEECCCCcEEEEecCCCce--EEEec---CCCceEEEEE--ECCEEEEEeCCCCcEEEEeC
Q psy5751         143 RTDELCWVDADSKSLECMTIRNRVR--RKVYS---NCTYPFGLSI--TDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       143 ~~~~Ly~~d~~~~~i~~~~~~g~~~--~~~~~---~~~~p~gla~--~~~~ly~td~~~~~i~~~~~  202 (232)
                      ++..+++.....+.+...+......  .....   ....+..+++  .++.+|+.+...+.+..++.
T Consensus       167 dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  233 (355)
T d2bbkh_         167 DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA  233 (355)
T ss_dssp             TSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCC
T ss_pred             CCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEec
Confidence            8888888876666665555442211  00000   1111223333  36677777776666555443

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.02  E-value=0.0013  Score=49.77  Aligned_cols=196  Identities=10%  Similarity=-0.013  Sum_probs=119.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++.++.|..+.......+...+++.......+......+..+++.+.++.++++....+.|...++.........
T Consensus       106 ~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~  185 (311)
T d1nr0a1         106 KDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF  185 (311)
T ss_dssp             EEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccccccccccc
Confidence            47888886666666554332145666766443322233334567889998877777777777788999998876655555


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCC------CCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAAD------LKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~------~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      .........++.+|....|+.+..   .+.|...++........+....      ......+++++++..|+.+ ...+.
T Consensus       186 ~~~~~~i~~v~~~p~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tg-s~Dg~  261 (311)
T d1nr0a1         186 GEHTKFVHSVRYNPDGSLFASTGG---DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA-SADKT  261 (311)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE-ETTSE
T ss_pred             ccccccccccccCccccccccccc---cccccccccccccccccccccccccccccccccccccCCCCCEEEEE-eCCCe
Confidence            545556789999996565555543   3457777776554333332210      1234689999987776654 45677


Q ss_pred             EEEEecCCCce-EEEecCCC---ceEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         157 LECMTIRNRVR-RKVYSNCT---YPFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       157 i~~~~~~g~~~-~~~~~~~~---~p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      |...+++..+. +.+.....   ...++....+.|+.+. ..+.|...+++
T Consensus       262 v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s-~dG~i~~wd~d  311 (311)
T d1nr0a1         262 IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS-ANGFINFVNPE  311 (311)
T ss_dssp             EEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE-TTCCEEEEETT
T ss_pred             EEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEE-CCCEEEEEeCC
Confidence            88888876544 33322222   2235555566665554 45777776654

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.00  E-value=0.002  Score=50.98  Aligned_cols=189  Identities=12%  Similarity=0.064  Sum_probs=123.7

Q ss_pred             CCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCC-------------------CeEE
Q psy5751          10 VEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQM-------------------DTIS   69 (232)
Q Consensus        10 ~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~-------------------~~I~   69 (232)
                      ....||+.|-.+. +|.|++++.-...+++. +....+.|+......+..|+.....                   +.+.
T Consensus        98 DGrylFVNDkan~-RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t  176 (459)
T d1fwxa2          98 DGRFLFMNDKANT-RVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  176 (459)
T ss_dssp             EEEEEEEEETTTT-EEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred             ceeEEEEEcCCCc-eEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence            3568999998888 99999999877656554 4567899998866566777765222                   2234


Q ss_pred             EEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCC-----------------------------------CcEE
Q psy5751          70 MANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSG-----------------------------------PKIE  114 (232)
Q Consensus        70 ~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~-----------------------------------~~I~  114 (232)
                      .+|.+.....--+. -...|.++++++..+++|++..+.+.                                   +.+.
T Consensus       177 ~ID~~tm~V~~QV~-V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~  255 (459)
T d1fwxa2         177 AVDADKWEVAWQVL-VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  255 (459)
T ss_dssp             EEETTTTEEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EEecCCceEEEEee-eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCce
Confidence            55665433221111 12368899999999999998754321                                   1112


Q ss_pred             EEeCC---CCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC--------CCc-eEEE-e--cCCCceEE
Q psy5751         115 WSNLD---GTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR--------NRV-RRKV-Y--SNCTYPFG  179 (232)
Q Consensus       115 ~~~~~---g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~--------g~~-~~~~-~--~~~~~p~g  179 (232)
                      .++..   +......+..  -..|.|+.+++++..+|++......+..++++        ..+ +..+ .  +..-.|.-
T Consensus       256 VVD~~~~~~~~v~~yIPV--pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLh  333 (459)
T d1fwxa2         256 VVDGRKEASSLFTRYIPI--ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH  333 (459)
T ss_dssp             EEECSGG--CSSEEEEEE--ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEE
T ss_pred             eecccccCCcceeEEEec--CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccc
Confidence            22221   1112111222  35799999999999999999889999999985        211 1122 2  23445777


Q ss_pred             EEEE-CCEEEEEeCCCCcEEEEeC
Q psy5751         180 LSIT-DEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       180 la~~-~~~ly~td~~~~~i~~~~~  202 (232)
                      -+++ .|..|.|.+-...|..-+.
T Consensus       334 t~fd~~g~aytslfids~v~kw~~  357 (459)
T d1fwxa2         334 TAFDGRGNAYTSLFLDSQVVKWNI  357 (459)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEH
T ss_pred             cccCCCceEEEEeeccceEEEEec
Confidence            7887 6899999998888887775

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=0.0016  Score=49.52  Aligned_cols=212  Identities=9%  Similarity=-0.007  Sum_probs=130.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++|.+..+.|+.+.. ++ .|...++.....+  ..+.........+++.+.+..++ +....+.|...++.......
T Consensus       101 ~~v~~s~dg~~l~s~~~-dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~~~~~~~~~~~  177 (337)
T d1gxra_         101 RSCKLLPDGCTLIVGGE-AS-TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF-SCCSDGNIAVWDLHNQTLVR  177 (337)
T ss_dssp             EEEEECTTSSEEEEEES-SS-EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEE
T ss_pred             EEEEEcCCCCEEEEeec-cc-cccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence            47899987777765543 45 7888888754422  22233345667778887555554 55556789999987765544


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECM  160 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~  160 (232)
                      ...........+++.+....++.+..   .+.|...++...........  ......+++++.+..|+.+ ...+.+...
T Consensus       178 ~~~~~~~~v~~l~~s~~~~~~~~~~~---d~~v~i~d~~~~~~~~~~~~--~~~i~~l~~~~~~~~l~~~-~~d~~i~i~  251 (337)
T d1gxra_         178 QFQGHTDGASCIDISNDGTKLWTGGL---DNTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVG-MESSNVEVL  251 (337)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred             cccccccccccccccccccccccccc---cccccccccccceeeccccc--ccceEEEEEccccccccee-ccccccccc
Confidence            44445556788999886667766653   35677777765433222222  3466889999987777655 446788888


Q ss_pred             ecCCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEc
Q psy5751         161 TIRNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVP  227 (232)
Q Consensus       161 ~~~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~  227 (232)
                      +++...............++++. .+.++++-...+.|...+.. +.....+    .+...+..+++-+
T Consensus       252 d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~s~  316 (337)
T d1gxra_         252 HVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS----KESSSVLSCDISV  316 (337)
T ss_dssp             ETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE----ECSSCEEEEEECT
T ss_pred             cccccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEc----cCCCCEEEEEEeC
Confidence            88877665444444456778874 44455555556777777765 3333222    2234455565543

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.97  E-value=0.00032  Score=55.56  Aligned_cols=147  Identities=9%  Similarity=0.060  Sum_probs=97.5

Q ss_pred             cCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEEEEEcCCCC-----------------CcEEE
Q psy5751          54 VNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLFWSDWNRSG-----------------PKIEW  115 (232)
Q Consensus        54 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly~~d~~~~~-----------------~~I~~  115 (232)
                      .++.||+.|..+.||.+++++...+..++. .....+.|+.+.+..+..|+....+..                 +.+..
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~  177 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  177 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence            478999999999999999999988766666 577788999987666777777533211                 11233


Q ss_pred             EeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCC-------------------------------------CcEE
Q psy5751         116 SNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADS-------------------------------------KSLE  158 (232)
Q Consensus       116 ~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~-------------------------------------~~i~  158 (232)
                      ++.+  ..++......-..|.+++++++++++|++...+                                     +.+.
T Consensus       178 ID~~--tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~  255 (459)
T d1fwxa2         178 VDAD--KWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  255 (459)
T ss_dssp             EETT--TTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EecC--CceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCce
Confidence            4444  333332221134688999999999999985331                                     1122


Q ss_pred             EEecC---CCceEEEecCCCceEEEEE--ECCEEEEEeCCCCcEEEEeC
Q psy5751         159 CMTIR---NRVRRKVYSNCTYPFGLSI--TDEKYYWTDWKTNRIESANK  202 (232)
Q Consensus       159 ~~~~~---g~~~~~~~~~~~~p~gla~--~~~~ly~td~~~~~i~~~~~  202 (232)
                      .++..   +............|+|+.+  ++.++|++...+..+..++.
T Consensus       256 VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~  304 (459)
T d1fwxa2         256 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDV  304 (459)
T ss_dssp             EEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEG
T ss_pred             eecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEe
Confidence            22222   1111111223466999999  47799999999999999985

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.93  E-value=0.00041  Score=52.84  Aligned_cols=146  Identities=10%  Similarity=0.023  Sum_probs=100.6

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEE
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVI   81 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~   81 (232)
                      ..++.|.+..+.|+++...++..|+..+.++...+.+ ......+..+++.+.++.|..+. ..+.+...++++.....+
T Consensus        45 v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~-~~~~~~v~~~~~spdg~~l~~~~-~~~~~~~~~~~~~~~~~~  122 (360)
T d1k32a3          45 IRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVAN-DRFEIMTVDLETGKPTVI  122 (360)
T ss_dssp             EEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCEEEE
T ss_pred             EEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEe-eCCCceEEeeeecccccccceec-cccccccccccccceeee
Confidence            3578999977788776554432688888887665433 34456788999999777777555 457899999998887777


Q ss_pred             EeCCCCCceEEEEeCCCCeEEEEEcC-------CCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEE
Q psy5751          82 VSKDLVNPRGIVVHPYYRKLFWSDWN-------RSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVD  151 (232)
Q Consensus        82 ~~~~~~~p~~iavd~~~~~ly~~d~~-------~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d  151 (232)
                      .........++++.|.+..|.++...       .....++..++.+.....+...  ......+++.+++.+|+++.
T Consensus       123 ~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~s  197 (360)
T d1k32a3         123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE--NSHDYAPAFDADSKNLYYLS  197 (360)
T ss_dssp             EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS--SSBEEEEEECTTSCEEEEEE
T ss_pred             eecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeeccc--ccccccccccCCCCEEEEEe
Confidence            76566677889999977888776422       1123466667765543333222  34556788999888888774

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=0.0021  Score=48.88  Aligned_cols=186  Identities=10%  Similarity=0.010  Sum_probs=114.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      ..+.+++....++.+. .+. .|...++...............+..+++.+.+..++.+. ..+.|...++.........
T Consensus       145 ~~~~~~~~~~~l~s~~-~d~-~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~-~d~~v~i~d~~~~~~~~~~  221 (337)
T d1gxra_         145 YALAISPDSKVCFSCC-SDG-NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG-LDNTVRSWDLREGRQLQQH  221 (337)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEE
T ss_pred             cccccccccccccccc-ccc-ccccccccccccccccccccccccccccccccccccccc-ccccccccccccceeeccc
Confidence            3567777555554443 444 688888886655444444445678888888777776555 4478888888655433333


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      . ....+..++++|.+..|+....   .+.|...++...........  -....++++++++..|+ +-...+.|...+.
T Consensus       222 ~-~~~~i~~l~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~--~~~i~~v~~s~~g~~l~-s~s~Dg~i~iwd~  294 (337)
T d1gxra_         222 D-FTSQIFSLGYCPTGEWLAVGME---SSNVEVLHVNKPDKYQLHLH--ESCVLSLKFAYCGKWFV-STGKDNLLNAWRT  294 (337)
T ss_dssp             E-CSSCEEEEEECTTSSEEEEEET---TSCEEEEETTSSCEEEECCC--SSCEEEEEECTTSSEEE-EEETTSEEEEEET
T ss_pred             c-cccceEEEEEcccccccceecc---cccccccccccccccccccc--ccccceEEECCCCCEEE-EEeCCCeEEEEEC
Confidence            3 3456788999986666665553   35688888876665433222  34568999999866555 4445677888888


Q ss_pred             CCCceEEEecCCCceEEEEEE-CCEEEEEeCCCCcEE
Q psy5751         163 RNRVRRKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIE  198 (232)
Q Consensus       163 ~g~~~~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~  198 (232)
                      ...+.............+++. ++...+|-...+.|.
T Consensus       295 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~  331 (337)
T d1gxra_         295 PYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKAT  331 (337)
T ss_dssp             TTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred             CCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence            765543333344556677774 344344433344443

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.79  E-value=0.00083  Score=49.52  Aligned_cols=194  Identities=11%  Similarity=0.042  Sum_probs=114.2

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC-----CeEEEEeCCCCCCEEEEeC-
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM-----DTISMANLNDDQPKVIVSK-   84 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~~~-   84 (232)
                      .+++.++..  + .|+.++++|...+.+. .......+.++.+.++.|+|+....     ..|++++.++...+.+... 
T Consensus        12 G~~v~f~~~--~-dl~~~d~~~g~~~~Lt-~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~   87 (281)
T d1k32a2          12 GDRIIFVCC--D-DLWEHDLKSGSTRKIV-SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFS   87 (281)
T ss_dssp             TTEEEEEET--T-EEEEEETTTCCEEEEE-CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCC
T ss_pred             CCEEEEEeC--C-cEEEEECCCCCEEEEe-cCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecC
Confidence            567766643  3 7999999988765554 3334567788888888888874321     3588999988776554321 


Q ss_pred             -----CCCCceEEEEeCCCCeEEEEEcCCC---CCcEEEEeCCCCCcEE-----------------EEEcC---------
Q psy5751          85 -----DLVNPRGIVVHPYYRKLFWSDWNRS---GPKIEWSNLDGTDREI-----------------FLKAA---------  130 (232)
Q Consensus        85 -----~~~~p~~iavd~~~~~ly~~d~~~~---~~~I~~~~~~g~~~~~-----------------~~~~~---------  130 (232)
                           ........+..|..+.|+++.....   ...+...+.++...+.                 +....         
T Consensus        88 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (281)
T d1k32a2          88 GKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGY  167 (281)
T ss_dssp             EEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTC
T ss_pred             CCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEeeccccceeeee
Confidence                 1123456778887788888754322   1223334433221110                 00000         


Q ss_pred             ----------------------CCCCcceEEEeCCCCEEEEEECC--CCcEEEEecCCCceEEEecC-CCceEEEEEECC
Q psy5751         131 ----------------------DLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIRNRVRRKVYSN-CTYPFGLSITDE  185 (232)
Q Consensus       131 ----------------------~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~g~~~~~~~~~-~~~p~gla~~~~  185 (232)
                                            ............  +.+++....  ...|+.++++|...+.+... ...+..+..++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~d~~g~~~~~lt~~~~~~~~~~SpDG~  245 (281)
T d1k32a2         168 RGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVG--HRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGR  245 (281)
T ss_dssp             CSTTCCEEEEEEETTEEEEEECCSSCCEEEEEET--TEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSS
T ss_pred             ccCCcceeeeeccccceeeccCCccccceeeeec--cccceecccccccceEEEeCCCCceEEeecCCCcccccCcCCCC
Confidence                                  000111112222  355555433  45799999999887766432 222335566788


Q ss_pred             EEEEEeCCCCcEEEEeCCCCCcceEEe
Q psy5751         186 KYYWTDWKTNRIESANKEGERAPSIAL  212 (232)
Q Consensus       186 ~ly~td~~~~~i~~~~~~g~~~~~i~~  212 (232)
                      +|+++.  .+.|+.++.+++..+.|..
T Consensus       246 ~I~f~~--~~~l~~~d~~~g~~~~i~~  270 (281)
T d1k32a2         246 RILFSK--GGSIYIFNPDTEKIEKIEI  270 (281)
T ss_dssp             CEEEEE--TTEEEEECTTTCCEEECCC
T ss_pred             EEEEEe--CCEEEEEECCCCCEEEecc
Confidence            888865  3579999999888776654

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.53  E-value=0.00019  Score=55.87  Aligned_cols=115  Identities=4%  Similarity=-0.144  Sum_probs=74.8

Q ss_pred             CCCCEEEEEEc--CCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC---------CCeEEEEeCCCC
Q psy5751           9 CVEGQVYYSSV--ADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ---------MDTISMANLNDD   76 (232)
Q Consensus         9 ~~~~~ly~~d~--~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~---------~~~I~~~~~~g~   76 (232)
                      +.....|++-.  ..+ ..|+.++.++......+.... . .++++.+.++.||++...         .+.|.++|..+.
T Consensus        29 ~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~-~-~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~  106 (368)
T d1mdah_          29 AISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-L-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF  106 (368)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-T-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred             CCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCC-C-CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCC
Confidence            34455555543  222 257788877655433333332 3 378999989999998742         346899998776


Q ss_pred             CCEEEEe-------CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE
Q psy5751          77 QPKVIVS-------KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL  127 (232)
Q Consensus        77 ~~~~~~~-------~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~  127 (232)
                      .+...+.       .....|.++++.|.+++||+++..  .+.+...++........+
T Consensus       107 ~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~--~~~v~~~d~~~~~~~~~~  162 (368)
T d1mdah_         107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG--SSAAAGLSVPGASDDQLT  162 (368)
T ss_dssp             CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS--SSCEEEEEETTTEEEEEE
T ss_pred             cEeeeecCCccceecccCCccceEECCCCCEEEEEeCC--CCeEEEEECCCCcEeEEe
Confidence            6543332       124568899999999999999865  456888888766544333

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.0095  Score=43.36  Aligned_cols=203  Identities=11%  Similarity=0.067  Sum_probs=115.0

Q ss_pred             EEEEeCCCCEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCe--EEEEeCCCCCCEE
Q psy5751           4 GITVDCVEGQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDT--ISMANLNDDQPKV   80 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~--I~~~~~~g~~~~~   80 (232)
                      +..|.+..++|.++..... ..++.++..+...+.+. ............+.+..|++.....+.  +............
T Consensus        43 sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~  121 (269)
T d2hqsa1          43 SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ  121 (269)
T ss_dssp             EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE
T ss_pred             eeEECCCCCEEEEEEeeccCcceeeeecccCceeEEe-eeecccccceecCCCCeeeEeeecCCccceeeccccccccee
Confidence            5567777777755543332 35777777766654333 333555666677767766665544322  3333222222212


Q ss_pred             EEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCC--cEE
Q psy5751          81 IVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSK--SLE  158 (232)
Q Consensus        81 ~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~--~i~  158 (232)
                      .. ............+..+.++++....+...|+..++++.....+...  ........+++++..+++.....+  .++
T Consensus       122 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~~~~~~~~~~~~~i~  198 (269)
T d2hqsa1         122 VT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGGQQHIA  198 (269)
T ss_dssp             CC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred             ee-eccccccccccccccccceecccccCCceEeeeecccccceeeecc--cccccccccccccceeEEEeecCCceeee
Confidence            21 2222333444555567777776554456789999888766554333  334445678888888877765543  677


Q ss_pred             EEecCCCceEEEecCCCceEEEEE--ECCEEEEEeC--CCCcEEEEeCCCCCcceEE
Q psy5751         159 CMTIRNRVRRKVYSNCTYPFGLSI--TDEKYYWTDW--KTNRIESANKEGERAPSIA  211 (232)
Q Consensus       159 ~~~~~g~~~~~~~~~~~~p~gla~--~~~~ly~td~--~~~~i~~~~~~g~~~~~i~  211 (232)
                      ..+.++...+.+.... .-....+  ++.+|+++..  +...|+.++.+|+..+.+.
T Consensus       199 ~~~~~~~~~~~~~~~~-~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~lt  254 (269)
T d2hqsa1         199 KQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP  254 (269)
T ss_dssp             EEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred             EeecccccceEeecCc-cccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEe
Confidence            7777766654443221 1223345  4666766532  3457889999988765443

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=97.18  E-value=0.03  Score=43.12  Aligned_cols=172  Identities=13%  Similarity=0.083  Sum_probs=94.7

Q ss_pred             eecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeC-----CCC--eEEEEEcCCCCCcEEEEeCCCCCcE
Q psy5751          52 DWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHP-----YYR--KLFWSDWNRSGPKIEWSNLDGTDRE  124 (232)
Q Consensus        52 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~-----~~~--~ly~~d~~~~~~~I~~~~~~g~~~~  124 (232)
                      ++....|+-||+..+ |++++++|+....+   ...+++.+-+-.     .++  .++.++-......|....+++....
T Consensus        37 ~p~~SlI~gTdK~~G-l~vYdL~G~~l~~~---~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~  112 (353)
T d1h6la_          37 NPQNSKLITTNKKSG-LAVYSLEGKMLHSY---HTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT  112 (353)
T ss_dssp             CGGGCEEEEEETTSC-CEEEETTCCEEEEC---CSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred             CcCccEEEEEcCcCC-EEEEcCCCcEEEec---ccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence            334456666776654 99999998775543   345565544331     011  2233332212335555555443322


Q ss_pred             EEEEc-------CCCCCcceEEE--eCCCCEEE-EEECCCCcEEEEec--CCCc-e--EEE--ecCCCceEEEEEE--CC
Q psy5751         125 IFLKA-------ADLKLPNSLAV--DFRTDELC-WVDADSKSLECMTI--RNRV-R--RKV--YSNCTYPFGLSIT--DE  185 (232)
Q Consensus       125 ~~~~~-------~~~~~p~~l~~--d~~~~~Ly-~~d~~~~~i~~~~~--~g~~-~--~~~--~~~~~~p~gla~~--~~  185 (232)
                      .....       ..+..+.|+++  ++.++.+| ++....+++....+  ++.. .  +.+  ......+.|++++  .+
T Consensus       113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~  192 (353)
T d1h6la_         113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYG  192 (353)
T ss_dssp             EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred             cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCC
Confidence            21111       01456889999  66667665 33445666665544  3321 1  222  2245567899997  47


Q ss_pred             EEEEEeCCCCcEEEEeCC---CCCcceEEeccC--CcceeEEEEEEcC
Q psy5751         186 KYYWTDWKTNRIESANKE---GERAPSIALDMM--GTTYMYGIAAVPS  228 (232)
Q Consensus       186 ~ly~td~~~~~i~~~~~~---g~~~~~i~~~~~--~~~~p~gi~~~~~  228 (232)
                      .||+++-.. .|++++.+   +...+.+.....  -...|=|||++..
T Consensus       193 ~LyisEE~~-Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~  239 (353)
T d1h6la_         193 SLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYA  239 (353)
T ss_dssp             EEEEEETTT-EEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEEC
T ss_pred             cEEEecCcc-ceEEEEeccCCCccceeeecccCccccCCccccEEEEc
Confidence            999999864 58888865   333333332211  2457899998853

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.16  E-value=0.023  Score=41.63  Aligned_cols=187  Identities=8%  Similarity=0.020  Sum_probs=109.5

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe-CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT-TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~-~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--   78 (232)
                      ..+++|++..+.|+-+. .++ .|...+++.......+. .......++++.+. +.++.+. ..+.+...+..+...  
T Consensus        15 V~~l~~s~dg~~l~s~s-~Dg-~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~-g~~~~~~-~d~~v~~~~~~~~~~~~   90 (299)
T d1nr0a2          15 ITALSSSADGKTLFSAD-AEG-HINSWDISTGISNRVFPDVHATMITGIKTTSK-GDLFTVS-WDDHLKVVPAGGSGVDS   90 (299)
T ss_dssp             EEEEEECTTSSEEEEEE-TTS-CEEEEETTTCCEEECSSCSCSSCEEEEEECTT-SCEEEEE-TTTEEEEECSSSSSSCT
T ss_pred             cEEEEECCCCCEEEEEc-CCC-eEEEEECCCCcEEEEEcCCCCCcEEEEEeecc-ceeeccc-ceeeEEEeccCCccccc
Confidence            35789998666555444 445 78888987654333332 22345678888874 4566554 346788887766432  


Q ss_pred             -EEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcE
Q psy5751          79 -KVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSL  157 (232)
Q Consensus        79 -~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i  157 (232)
                       ..........+..+++.+.+..+.....    ..+...+..   .......  ...+..+++++++..|+.. ...+.|
T Consensus        91 ~~~~~~~~~~~~~~~~~s~~g~~~~~~~~----~~i~~~~~~---~~~~~~~--~~~~~~~~~s~~~~~l~~g-~~dg~i  160 (299)
T d1nr0a2          91 SKAVANKLSSQPLGLAVSADGDIAVAACY----KHIAIYSHG---KLTEVPI--SYNSSCVALSNDKQFVAVG-GQDSKV  160 (299)
T ss_dssp             TSCCEEECSSCEEEEEECTTSSCEEEEES----SEEEEEETT---EEEEEEC--SSCEEEEEECTTSCEEEEE-ETTSEE
T ss_pred             ccccccccccccccccccccccccccccc----ccccccccc---ccccccc--ccccccccccccccccccc-cccccc
Confidence             2222234457788999985555544432    235554422   1111111  3467789999986666554 456788


Q ss_pred             EEEecCCCceEEE--ecCCCceEEEEEE--CCEEEEEeCCCCcEEEEeCC
Q psy5751         158 ECMTIRNRVRRKV--YSNCTYPFGLSIT--DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       158 ~~~~~~g~~~~~~--~~~~~~p~gla~~--~~~ly~td~~~~~i~~~~~~  203 (232)
                      ...++++.....+  .........+++.  +..|+.+ ...+.|...+..
T Consensus       161 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~~~~~~  209 (299)
T d1nr0a2         161 HVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVAT-DQSRKVIPYSVA  209 (299)
T ss_dssp             EEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSCEEEEEGG
T ss_pred             ccccccccccccccccccccccccccccccccccccc-cccccccccccc
Confidence            8888876654333  2234456778874  3444444 445678877765

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.14  E-value=0.032  Score=42.66  Aligned_cols=154  Identities=8%  Similarity=-0.078  Sum_probs=91.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCcee--EEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVE--DVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~--~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++|++....|..+ ..++ .|...++++....  ..+......+..|++.+.++.|. +-...+.|.+.+++......
T Consensus        11 t~~~~s~dg~~la~~-~~~~-~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~-s~s~D~~i~vWd~~~~~~~~   87 (371)
T d1k8kc_          11 SCHAWNKDRTQIAIC-PNNH-EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV-TCGTDRNAYVWTLKGRTWKP   87 (371)
T ss_dssp             CEEEECTTSSEEEEE-CSSS-EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEEEETTEEEE
T ss_pred             EEEEECCCCCEEEEE-eCCC-EEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEE-EEECCCeEEEEeeccccccc
Confidence            378999865555444 4445 7888888765432  22333346789999998666555 44455788888887655333


Q ss_pred             EEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEE-E--cCCCCCcceEEEeCCCCEEEEEECCCC
Q psy5751          81 IVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFL-K--AADLKLPNSLAVDFRTDELCWVDADSK  155 (232)
Q Consensus        81 ~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~-~--~~~~~~p~~l~~d~~~~~Ly~~d~~~~  155 (232)
                      ...  .....+..++.+|.+..|+.....   +.|....++........ .  ...-.....+++++++..| .+-...+
T Consensus        88 ~~~~~~~~~~v~~i~~~p~~~~l~~~s~d---~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l-~s~s~D~  163 (371)
T d1k8kc_          88 TLVILRINRAARCVRWAPNEKKFAVGSGS---RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL-AAGSCDF  163 (371)
T ss_dssp             EEECCCCSSCEEEEEECTTSSEEEEEETT---SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE-EEEETTS
T ss_pred             ccccccccccccccccccccccceeeccc---Ccceeeeeecccccccccccccccccccccccccccccce-eccccCc
Confidence            322  334567899999966666666533   34555554444332222 1  1112345688999975555 4444556


Q ss_pred             cEEEEecC
Q psy5751         156 SLECMTIR  163 (232)
Q Consensus       156 ~i~~~~~~  163 (232)
                      .|...+..
T Consensus       164 ~v~v~~~~  171 (371)
T d1k8kc_         164 KCRIFSAY  171 (371)
T ss_dssp             CEEEEECC
T ss_pred             EEEEEeec
Confidence            66665554

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.11  E-value=0.025  Score=41.00  Aligned_cols=161  Identities=7%  Similarity=-0.041  Sum_probs=90.5

Q ss_pred             EEEEEeCCCCEEEEEEcCC-C---CcEEEEEcCCCceeEEEeC------CCCCccEEEEeecCCeEEEEeCCC-----Ce
Q psy5751           3 IGITVDCVEGQVYYSSVAD-K---SSIKRAHLDGKNVEDVITT------NIRSPEGLTFDWVNRVLYWTDSQM-----DT   67 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~-~---~~i~~~~~~g~~~~~~~~~------~~~~p~gl~~d~~~~~ly~~d~~~-----~~   67 (232)
                      .+..|.+..++|.++.... .   ..|++++..+.....+...      ........+..+.++.|+++....     ..
T Consensus        44 ~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~  123 (281)
T d1k32a2          44 NNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTC  123 (281)
T ss_dssp             EEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCE
T ss_pred             cCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCcccee
Confidence            3567888888887764322 1   2588888887765444221      112345566666777788765432     12


Q ss_pred             EEEEeCCCCCCEEEEe-------------------------------------------------CCCCCceEEEEeCCC
Q psy5751          68 ISMANLNDDQPKVIVS-------------------------------------------------KDLVNPRGIVVHPYY   98 (232)
Q Consensus        68 I~~~~~~g~~~~~~~~-------------------------------------------------~~~~~p~~iavd~~~   98 (232)
                      +...+.++........                                                 ............  .
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  201 (281)
T d1k32a2         124 LYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIV--G  201 (281)
T ss_dssp             EEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEE--T
T ss_pred             eeeecCCCceeEEecCCccceeeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeee--c
Confidence            3333433322110000                                                 011111122233  3


Q ss_pred             CeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEE
Q psy5751          99 RKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKV  170 (232)
Q Consensus        99 ~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~  170 (232)
                      +.+++.........|+.++++|...+.+....   ......+++++++|+|..  .+.|+.+++++++.+.+
T Consensus       202 ~~~~~~~~~~~~~~l~~~d~~g~~~~~lt~~~---~~~~~~~SpDG~~I~f~~--~~~l~~~d~~~g~~~~i  268 (281)
T d1k32a2         202 HRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT---DYYPRHLNTDGRRILFSK--GGSIYIFNPDTEKIEKI  268 (281)
T ss_dssp             TEEEEEECTTSSCEEEEEETTSCSCEECCCCC---SSCEEEEEESSSCEEEEE--TTEEEEECTTTCCEEEC
T ss_pred             cccceecccccccceEEEeCCCCceEEeecCC---CcccccCcCCCCEEEEEe--CCEEEEEECCCCCEEEe
Confidence            45555544444678999999988877664432   122345677778888865  35799999988877766

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.92  E-value=0.043  Score=40.48  Aligned_cols=141  Identities=15%  Similarity=0.011  Sum_probs=85.2

Q ss_pred             CCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe--CCCCC
Q psy5751          11 EGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS--KDLVN   88 (232)
Q Consensus        11 ~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~   88 (232)
                      ...++++-..++ .|...++........+......+.++++.+.++.|+ +-...+.|...++..........  .....
T Consensus       195 ~~~~~~~~~~d~-~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~-s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~  272 (340)
T d1tbga_         195 DTRLFVSGACDA-SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDLRADQELMTYSHDNIICG  272 (340)
T ss_dssp             TSSEEEEEETTT-EEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred             ccceeEEeecCc-eEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEeecccccccccccccccCc
Confidence            444555554555 677778775544334443345678899988555554 55556789999987765544443  23334


Q ss_pred             ceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEE
Q psy5751          89 PRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLE  158 (232)
Q Consensus        89 p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~  158 (232)
                      ...+++++....|+....   .+.|...++........+..- .....++++++++..|+.+ +..+.|.
T Consensus       273 i~~~~~s~~~~~l~~g~~---dg~i~iwd~~~~~~~~~~~~H-~~~V~~l~~s~d~~~l~s~-s~Dg~v~  337 (340)
T d1tbga_         273 ITSVSFSKSGRLLLAGYD---DFNCNVWDALKADRAGVLAGH-DNRVSCLGVTDDGMAVATG-SWDSFLK  337 (340)
T ss_dssp             EEEEEECSSSCEEEEEET---TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSCEEEE-ETTSCEE
T ss_pred             eEEEEECCCCCEEEEEEC---CCEEEEEECCCCcEEEEEcCC-CCCEEEEEEeCCCCEEEEE-ccCCEEE
Confidence            578899985555554443   456888887655443333321 3456789999886666544 3344443

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.71  E-value=0.07  Score=39.89  Aligned_cols=161  Identities=6%  Similarity=-0.063  Sum_probs=92.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++....|..+.......+.....+....-..+...-....++++.+.+..+..+-...+.|...++.........
T Consensus       119 ~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~  198 (325)
T d1pgua1         119 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD  198 (325)
T ss_dssp             EEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE
T ss_pred             EEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceec
Confidence            36788887777766654433256666666433222333333566788888877666666666678888876543322222


Q ss_pred             e---CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEe---CCCCEEEEEECCCCc
Q psy5751          83 S---KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVD---FRTDELCWVDADSKS  156 (232)
Q Consensus        83 ~---~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d---~~~~~Ly~~d~~~~~  156 (232)
                      .   ........++++|..+.++.+-..  .+.|...++........+... .....++.+.   +++..| .+-+..+.
T Consensus       199 ~~~~~~~~~v~~v~~~pd~~~~l~s~~~--d~~i~iwd~~~~~~~~~l~~~-~~~v~~~~~s~~~~dg~~l-~s~s~D~~  274 (325)
T d1pgua1         199 RTHHKQGSFVRDVEFSPDSGEFVITVGS--DRKISCFDGKSGEFLKYIEDD-QEPVQGGIFALSWLDSQKF-ATVGADAT  274 (325)
T ss_dssp             CSSSCTTCCEEEEEECSTTCCEEEEEET--TCCEEEEETTTCCEEEECCBT-TBCCCSCEEEEEESSSSEE-EEEETTSE
T ss_pred             ccccCCCCccEEeeeccccceecccccc--ccceeeeeecccccccccccc-ccccccceeeeeccCCCEE-EEEeCCCe
Confidence            2   223345788999866777666543  456888887654433322221 2223344433   443444 45556777


Q ss_pred             EEEEecCCCce
Q psy5751         157 LECMTIRNRVR  167 (232)
Q Consensus       157 i~~~~~~g~~~  167 (232)
                      |...+++.++.
T Consensus       275 i~iwd~~~~~~  285 (325)
T d1pgua1         275 IRVWDVTTSKC  285 (325)
T ss_dssp             EEEEETTTTEE
T ss_pred             EEEEECCCCCE
Confidence            88888876543

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.54  E-value=0.084  Score=38.79  Aligned_cols=216  Identities=9%  Similarity=0.004  Sum_probs=111.2

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC--E
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP--K   79 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~   79 (232)
                      ..+++|++..+.|.-+ ..++ .|...++........+......+..+++.+.+..++.+. ..+.+...+......  .
T Consensus        58 I~~l~~s~~~~~l~sg-s~Dg-~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~d~~i~~~~~~~~~~~~~  134 (340)
T d1tbga_          58 IYAMHWGTDSRLLVSA-SQDG-KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG-LDNICSIYNLKTREGNVR  134 (340)
T ss_dssp             EEEEEECTTSSEEEEE-ETTT-EEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEE-TTCCEEEEESSSSCSCCC
T ss_pred             EEEEEECCCCCEEEEE-ECCC-ceeeeecccceeEEEEecccccEEeeEeeccceeeeeec-ccceeecccccccccccc
Confidence            3588999866555444 4455 788889876554344443445778888988666665444 334555544333221  0


Q ss_pred             E--EEeC-----------------------------------------CCCCceEEEEeCCCCeEEEEEcCCCCCcEEEE
Q psy5751          80 V--IVSK-----------------------------------------DLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWS  116 (232)
Q Consensus        80 ~--~~~~-----------------------------------------~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~  116 (232)
                      .  .+..                                         ...........+ .+.++.+...  .+.|...
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--d~~v~i~  211 (340)
T d1tbga_         135 VSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGAC--DASAKLW  211 (340)
T ss_dssp             EEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEET--TTEEEEE
T ss_pred             cceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccc-ccceeEEeec--CceEEEE
Confidence            0  0000                                         000111222222 2222222211  2345555


Q ss_pred             eCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCceEEEecC---CCceEEEEEE-CCEEEEEeC
Q psy5751         117 NLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVRRKVYSN---CTYPFGLSIT-DEKYYWTDW  192 (232)
Q Consensus       117 ~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~~---~~~p~gla~~-~~~ly~td~  192 (232)
                      ++........+... -...+++++++.+..|+.+ ...+.|...+++..........   ......+++. ++.+.++-.
T Consensus       212 d~~~~~~~~~~~~h-~~~i~~v~~~p~~~~l~s~-s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~  289 (340)
T d1tbga_         212 DVREGMCRQTFTGH-ESDINAICFFPNGNAFATG-SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY  289 (340)
T ss_dssp             ETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEE
T ss_pred             ECCCCcEEEEEeCC-CCCeEEEEECCCCCEEEEE-eCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEE
Confidence            54433222222221 3456789999975555544 5577888888886655443332   2223566664 455555555


Q ss_pred             CCCcEEEEeCC-CCCcceEEeccCCcceeEEEEEEcC
Q psy5751         193 KTNRIESANKE-GERAPSIALDMMGTTYMYGIAAVPS  228 (232)
Q Consensus       193 ~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~gi~~~~~  228 (232)
                      ..+.|...+.. +.....+.   .+......|++-++
T Consensus       290 ~dg~i~iwd~~~~~~~~~~~---~H~~~V~~l~~s~d  323 (340)
T d1tbga_         290 DDFNCNVWDALKADRAGVLA---GHDNRVSCLGVTDD  323 (340)
T ss_dssp             TTSCEEEEETTTCCEEEEEC---CCSSCEEEEEECTT
T ss_pred             CCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEeCC
Confidence            56788888866 33333332   23445566766543

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.49  E-value=0.087  Score=38.36  Aligned_cols=191  Identities=15%  Similarity=0.058  Sum_probs=107.1

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCce---eEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNV---EDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPK   79 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~---~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~   79 (232)
                      .+++|.+ ++.++.+.. ++ .+...+..+...   ..........+.++++.+.++.+..+..  +.+...+...   .
T Consensus        59 ~~v~~~~-~g~~~~~~~-d~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~--~~i~~~~~~~---~  130 (299)
T d1nr0a2          59 TGIKTTS-KGDLFTVSW-DD-HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY--KHIAIYSHGK---L  130 (299)
T ss_dssp             EEEEECT-TSCEEEEET-TT-EEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEES--SEEEEEETTE---E
T ss_pred             EEEEeec-cceeecccc-ee-eEEEeccCCcccccccccccccccccccccccccccccccccc--cccccccccc---c
Confidence            4677877 445555443 34 677777665321   1112222356778888776666655543  3555555321   1


Q ss_pred             EEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEE
Q psy5751          80 VIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLEC  159 (232)
Q Consensus        80 ~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~  159 (232)
                      .... ....+..+++.|....|+....   .+.|...++.+.....+.....-.....+++++.+..|+.+ ...+.|..
T Consensus       131 ~~~~-~~~~~~~~~~s~~~~~l~~g~~---dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~~  205 (299)
T d1nr0a2         131 TEVP-ISYNSSCVALSNDKQFVAVGGQ---DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVAT-DQSRKVIP  205 (299)
T ss_dssp             EEEE-CSSCEEEEEECTTSCEEEEEET---TSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSCEEE
T ss_pred             cccc-cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence            1111 2345677888885555555443   45688877766543332222113467899999987777655 44677888


Q ss_pred             EecCCCceEEEec----CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCCCCC
Q psy5751         160 MTIRNRVRRKVYS----NCTYPFGLSIT-DEKYYWTDWKTNRIESANKEGER  206 (232)
Q Consensus       160 ~~~~g~~~~~~~~----~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~g~~  206 (232)
                      .++..........    ......++++. ++.++++-...+.|...+.....
T Consensus       206 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~  257 (299)
T d1nr0a2         206 YSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS  257 (299)
T ss_dssp             EEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred             ccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCC
Confidence            8876543322111    12334577774 55555555556778888876433

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.32  E-value=0.1  Score=37.43  Aligned_cols=158  Identities=9%  Similarity=0.021  Sum_probs=96.5

Q ss_pred             CCEEEEEEcCCCC---cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCC--CeEEEEeCCCCCCEEEEeCC
Q psy5751          11 EGQVYYSSVADKS---SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQM--DTISMANLNDDQPKVIVSKD   85 (232)
Q Consensus        11 ~~~ly~~d~~~~~---~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~   85 (232)
                      ++.-|+++...+.   .|+.++.+|++.+.+... .......+..+.++.|.|+....  ..++..+.++...+.+.. .
T Consensus         4 ~~iay~~~~~~~~~~~~l~i~d~dG~~~~~l~~~-~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~-~   81 (269)
T d2hqsa1           4 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-F   81 (269)
T ss_dssp             CEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-C
T ss_pred             CeEEEEEEeCCCCceEEEEEEcCCCCCcEEEecC-CCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEee-e
Confidence            3445777665442   488999999887666543 24455678888899998775543  468888888877766654 4


Q ss_pred             CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECC--CCcEEEEecC
Q psy5751          86 LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDAD--SKSLECMTIR  163 (232)
Q Consensus        86 ~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~--~~~i~~~~~~  163 (232)
                      .........+|....+.+.........+................  .............+.++++...  ...|+..+.+
T Consensus        82 ~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~  159 (269)
T d2hqsa1          82 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN  159 (269)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             ecccccceecCCCCeeeEeeecCCccceeecccccccceeeeec--cccccccccccccccceecccccCCceEeeeecc
Confidence            55677788888777776665443333344433333322222221  2223334455566677776544  3478888888


Q ss_pred             CCceEEEec
Q psy5751         164 NRVRRKVYS  172 (232)
Q Consensus       164 g~~~~~~~~  172 (232)
                      +.....+..
T Consensus       160 ~~~~~~~~~  168 (269)
T d2hqsa1         160 GGAPQRITW  168 (269)
T ss_dssp             SSCCEECCC
T ss_pred             cccceeeec
Confidence            776554443

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.02  E-value=0.19  Score=37.76  Aligned_cols=192  Identities=9%  Similarity=0.029  Sum_probs=110.4

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe------------------CCCCCccEEEEeecCCeEEEEeCC
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT------------------TNIRSPEGLTFDWVNRVLYWTDSQ   64 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~------------------~~~~~p~gl~~d~~~~~ly~~d~~   64 (232)
                      .+++|++.++.|. +- .++ .|...++........+.                  .....+.++++.+.++.|+ +-..
T Consensus        66 ~~l~fs~dg~~la-sg-~d~-~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~-s~~~  141 (388)
T d1erja_          66 CCVKFSNDGEYLA-TG-CNK-TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA-TGAE  141 (388)
T ss_dssp             CEEEECTTSSEEE-EE-CBS-CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE-EEET
T ss_pred             EEEEECCCCCEEE-EE-eCC-eEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcce-eccc
Confidence            3788988555444 33 345 78888876433211111                  1112356788887555554 5555


Q ss_pred             CCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC
Q psy5751          65 MDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT  144 (232)
Q Consensus        65 ~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~  144 (232)
                      .+.|...+...................++..+....++.+..   .+.+...++...........  ......+.+.+.+
T Consensus       142 dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~---~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~  216 (388)
T d1erja_         142 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCSLTLSI--EDGVTTVAVSPGD  216 (388)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEEC--SSCEEEEEECSTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc---ceeeeeeecccccccccccc--ccccccccccCCC
Confidence            678888887765544444445556778888886666666653   34577777775544433333  4455667777766


Q ss_pred             CEEEEEECCCCcEEEEecCCCce-EEEec-------CCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC
Q psy5751         145 DELCWVDADSKSLECMTIRNRVR-RKVYS-------NCTYPFGLSIT-DEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       145 ~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~-------~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~  203 (232)
                      +.+..+-...+.|...+...... ..+..       .......+++. ++.+..+-...+.|...+..
T Consensus       217 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~  284 (388)
T d1erja_         217 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ  284 (388)
T ss_dssp             CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEecc
Confidence            66666656677788888775443 22211       11224566764 34444444445666666654

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.72  E-value=0.21  Score=35.82  Aligned_cols=156  Identities=10%  Similarity=0.057  Sum_probs=94.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++..+.|.-+. .++ .|...+++.......+......+..+++++.+..+.... ....+...+..........
T Consensus        21 ~~l~~sp~~~~l~s~s-~Dg-~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   97 (317)
T d1vyhc1          21 TRVIFHPVFSVMVSAS-EDA-TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS-ADMTIKLWDFQGFECIRTM   97 (317)
T ss_dssp             EEEEECSSSSEEEEEE-SSS-CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE-TTSCCCEEETTSSCEEECC
T ss_pred             EEEEEcCCCCEEEEEe-CCC-eEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccc-ccccccccccccccccccc
Confidence            4789998665554443 445 788889886554444444456778889988665555443 4455555555544433333


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEec
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTI  162 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~  162 (232)
                      .........+...+....+.....   .+.+...++........+... ......+++++++..|..+ ...+.|...+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~d~~v~~~~~  172 (317)
T d1vyhc1          98 HGHDHNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASC-SNDQTVRVWVV  172 (317)
T ss_dssp             CCCSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTSSEEEEE-ETTSCEEEEET
T ss_pred             ccccccceeeeccCCCceEEeecc---CcceeEeecccceeeeEEccC-CCcceeeecccCCCEEEEE-eCCCeEEEEee
Confidence            334555677888876666655543   345777777655544444432 4566788888875555444 44566766666


Q ss_pred             CCCc
Q psy5751         163 RNRV  166 (232)
Q Consensus       163 ~g~~  166 (232)
                      ....
T Consensus       173 ~~~~  176 (317)
T d1vyhc1         173 ATKE  176 (317)
T ss_dssp             TTCC
T ss_pred             ccce
Confidence            6443

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.44  E-value=0.35  Score=36.48  Aligned_cols=181  Identities=8%  Similarity=0.062  Sum_probs=103.8

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV   80 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~   80 (232)
                      .+++|++..+.|.-+.. ++ .|...+++....+....  .....+..+++.+.++.|+.+. ..+.|...+++......
T Consensus        55 ~~l~fsp~~~~l~s~s~-D~-~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s-~d~~i~i~~~~~~~~~~  131 (371)
T d1k8kc_          55 TGVDWAPDSNRIVTCGT-DR-NAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWW  131 (371)
T ss_dssp             EEEEEETTTTEEEEEET-TS-CEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEE
T ss_pred             EEEEECCCCCEEEEEEC-CC-eEEEEeecccccccccccccccccccccccccccccceeec-ccCcceeeeeecccccc
Confidence            47889987776655443 44 68888887655433332  2345678899988777666554 44667766665554432


Q ss_pred             EEe----CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC----------------cEEEEEc-CCCCCcceEE
Q psy5751          81 IVS----KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD----------------REIFLKA-ADLKLPNSLA  139 (232)
Q Consensus        81 ~~~----~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~----------------~~~~~~~-~~~~~p~~l~  139 (232)
                      ...    ........++.+|.+..|..+..   .+.|...++....                .+.+... .......+++
T Consensus       132 ~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~---D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  208 (371)
T d1k8kc_         132 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSC---DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC  208 (371)
T ss_dssp             EEEEECTTCCSCEEEEEECTTSSEEEEEET---TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred             cccccccccccccccccccccccceecccc---CcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEE
Confidence            222    22345678899985444433332   2345555543221                1122211 1133457899


Q ss_pred             EeCCCCEEEEEECCCCcEEEEecCCCceEEEec-CCCceEEEEEE-CCEEEEE
Q psy5751         140 VDFRTDELCWVDADSKSLECMTIRNRVRRKVYS-NCTYPFGLSIT-DEKYYWT  190 (232)
Q Consensus       140 ~d~~~~~Ly~~d~~~~~i~~~~~~g~~~~~~~~-~~~~p~gla~~-~~~ly~t  190 (232)
                      +++++..|+.+ ...+.|...++.......... ......++++. ++.+..+
T Consensus       209 ~s~~g~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~  260 (371)
T d1k8kc_         209 FSANGSRVAWV-SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAA  260 (371)
T ss_dssp             ECSSSSEEEEE-ETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEE
T ss_pred             eeccccccccc-ccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEE
Confidence            99987777666 446778888887654432222 22334577774 5555554

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.36  E-value=0.32  Score=35.50  Aligned_cols=163  Identities=7%  Similarity=0.015  Sum_probs=93.7

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFW  103 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~  103 (232)
                      .|...++..................+.+++..+.++ +....+.|...+.........+.........++.+  .+.|+.
T Consensus       182 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~  258 (355)
T d1nexb2         182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI-SASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVS  258 (355)
T ss_dssp             CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEE
T ss_pred             eeeeeecccccceeeeeccccccccccccccceeee-cccccceEEeeeccccccccccccccccccccccc--cceeee
Confidence            577777765443333334445667788888666665 44455788888887766555555444556777776  455544


Q ss_pred             EEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecCCCce-EEE-ecCCCceEEEE
Q psy5751         104 SDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIRNRVR-RKV-YSNCTYPFGLS  181 (232)
Q Consensus       104 ~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~g~~~-~~~-~~~~~~p~gla  181 (232)
                      ...   .+.|...++...........   .....++..+.++.+..+- ..+.|...++..++. ... .........++
T Consensus       259 ~~~---dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~  331 (355)
T d1nexb2         259 AAA---DGSIRGWDANDYSRKFSYHH---TNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDADQIWSVN  331 (355)
T ss_dssp             ECT---TSEEEEEETTTCCEEEEEEC---TTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTCSEEEEEE
T ss_pred             eec---ccccccccccccceeccccc---CCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCCCCEEEEE
Confidence            443   45688888876654443333   2344443333335555553 367788888875432 111 11222345677


Q ss_pred             EECCEEEEEeCCCCc
Q psy5751         182 ITDEKYYWTDWKTNR  196 (232)
Q Consensus       182 ~~~~~ly~td~~~~~  196 (232)
                      +..+.++.+-...++
T Consensus       332 ~~~~~~~~~~s~dg~  346 (355)
T d1nexb2         332 FKGKTLVAAVEKDGQ  346 (355)
T ss_dssp             EETTEEEEEEESSSC
T ss_pred             EcCCeEEEEEECCCc
Confidence            777777666544454

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.25  E-value=0.39  Score=35.92  Aligned_cols=214  Identities=10%  Similarity=0.026  Sum_probs=117.2

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .+++|++.++.|+.+. .++ .|...+................+..+++.+.+..++.+. ..+.|...+..........
T Consensus       125 ~~l~~s~~~~~l~s~~-~dg-~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~  201 (388)
T d1erja_         125 RSVCFSPDGKFLATGA-EDR-LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-GDRTVRIWDLRTGQCSLTL  201 (388)
T ss_dssp             EEEEECTTSSEEEEEE-TTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEE
T ss_pred             EEEEECCCCCcceecc-ccc-ccccccccccccccccccccccccccccccccccccccc-cceeeeeeecccccccccc
Confidence            4688888666655544 445 688888776554333333345677788887666666554 4578888888776544444


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC------CCCCcceEEEeCCCCEEEEEECCCCc
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA------DLKLPNSLAVDFRTDELCWVDADSKS  156 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~------~~~~p~~l~~d~~~~~Ly~~d~~~~~  156 (232)
                      . .......++..+.++.++.+...  .+.|...+.........+...      .......+++++++..|+.+ ...+.
T Consensus       202 ~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~d~~  277 (388)
T d1erja_         202 S-IEDGVTTVAVSPGDGKYIAAGSL--DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG-SLDRS  277 (388)
T ss_dssp             E-CSSCEEEEEECSTTCCEEEEEET--TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-ETTSE
T ss_pred             c-cccccccccccCCCCCeEEEEcC--CCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEE-ECCCc
Confidence            3 33455667777766666665433  355777777654433222211      02235688999986666544 45667


Q ss_pred             EEEEecCCCceEEE-------------ecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCcceeE
Q psy5751         157 LECMTIRNRVRRKV-------------YSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYMY  221 (232)
Q Consensus       157 i~~~~~~g~~~~~~-------------~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p~  221 (232)
                      |...++........             .........+++. ++.+.++-...+.|...+.. ++....+.   .+.....
T Consensus       278 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~---~H~~~V~  354 (388)
T d1erja_         278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVI  354 (388)
T ss_dssp             EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEE
T ss_pred             EEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEe---CCCCCEE
Confidence            77777754322111             1122334566663 34444444445778877766 44333332   2333445


Q ss_pred             EEEEE
Q psy5751         222 GIAAV  226 (232)
Q Consensus       222 gi~~~  226 (232)
                      .+++.
T Consensus       355 ~~~~~  359 (388)
T d1erja_         355 SVAVA  359 (388)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            55543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.31  E-value=0.67  Score=34.15  Aligned_cols=198  Identities=9%  Similarity=-0.026  Sum_probs=110.1

Q ss_pred             EEEEEeCC-CCEEEEEEcCCCCcEEEEEcCCCc----ee----EEEeCCCCCccEEEEeecCCeEEEEeCC-CCeEEEEe
Q psy5751           3 IGITVDCV-EGQVYYSSVADKSSIKRAHLDGKN----VE----DVITTNIRSPEGLTFDWVNRVLYWTDSQ-MDTISMAN   72 (232)
Q Consensus         3 ~~i~~d~~-~~~ly~~d~~~~~~i~~~~~~g~~----~~----~~~~~~~~~p~gl~~d~~~~~ly~~d~~-~~~I~~~~   72 (232)
                      .+++|.+. ++.+.++-..++ .|...++....    .+    ............+++.+.+..|..+... ...+...+
T Consensus        67 ~~v~fsP~~~g~~lasgs~Dg-~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~  145 (325)
T d1pgua1          67 TTVKFSPIKGSQYLCSGDESG-KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS  145 (325)
T ss_dssp             EEEEECSSTTCCEEEEEETTS-EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred             EEEEEeeCCCCCEEEEEeCCC-CEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEe
Confidence            46788764 334444444444 66666554211    11    1112223456778888767766655433 45677777


Q ss_pred             CCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEc--CCCCCcceEEEeCCCCEEEEE
Q psy5751          73 LNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKA--ADLKLPNSLAVDFRTDELCWV  150 (232)
Q Consensus        73 ~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~--~~~~~p~~l~~d~~~~~Ly~~  150 (232)
                      .+.......+.........+++++.+..+..+-..  .+.|...++...........  ........++++++.+.++.+
T Consensus       146 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~--d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s  223 (325)
T d1pgua1         146 WDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD--DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT  223 (325)
T ss_dssp             TTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEET--TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred             ecccccceeeeecccccccccccccccceEEEeec--ccccccccccccccceecccccCCCCccEEeeeccccceeccc
Confidence            76544333333344556789999866665555433  34566666554332222221  112335789999987777777


Q ss_pred             ECCCCcEEEEecCCCceEEEecCCCc-----eEEEEEECCEEEEEeCCCCcEEEEeCC
Q psy5751         151 DADSKSLECMTIRNRVRRKVYSNCTY-----PFGLSITDEKYYWTDWKTNRIESANKE  203 (232)
Q Consensus       151 d~~~~~i~~~~~~g~~~~~~~~~~~~-----p~gla~~~~~ly~td~~~~~i~~~~~~  203 (232)
                      -...+.|...+++..........-..     .+++++.++..+.+-...+.|...+..
T Consensus       224 ~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~  281 (325)
T d1pgua1         224 VGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT  281 (325)
T ss_dssp             EETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred             cccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECC
Confidence            67778888888875544333321111     234444455555555566777777765

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.47  E-value=0.83  Score=32.36  Aligned_cols=214  Identities=7%  Similarity=-0.004  Sum_probs=108.6

Q ss_pred             EEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEE
Q psy5751           3 IGITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIV   82 (232)
Q Consensus         3 ~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   82 (232)
                      .++++++....+...... . .+.......................+.+.+.++.+. +-...+.+...++........+
T Consensus        63 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~  139 (317)
T d1vyhc1          63 QDISFDHSGKLLASCSAD-M-TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTF  139 (317)
T ss_dssp             EEEEECTTSSEEEEEETT-S-CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEE
T ss_pred             EEEeeecccccccccccc-c-ccccccccccccccccccccccceeeeccCCCceEE-eeccCcceeEeecccceeeeEE
Confidence            355666644444433332 2 233334333322222222234556677777566555 4445577888888776655555


Q ss_pred             eCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC------------------
Q psy5751          83 SKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT------------------  144 (232)
Q Consensus        83 ~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~------------------  144 (232)
                      .........++.++.+..|..+..   .+.|...++........+... ......+++.+..                  
T Consensus       140 ~~~~~~~~~~~~~~~~~~l~~~~~---d~~v~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (317)
T d1vyhc1         140 TGHREWVRMVRPNQDGTLIASCSN---DQTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGK  215 (317)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred             ccCCCcceeeecccCCCEEEEEeC---CCeEEEEeeccceeeEEEecC-CCCceEEEEeeccccceeeccccceeeeecc
Confidence            555566778888885555544443   345776766654433322221 2222333333221                  


Q ss_pred             -CEEEEEECCCCcEEEEecCCCce-EEEecCCCceEEEEEE-CCEEEEEeCCCCcEEEEeCC-CCCcceEEeccCCccee
Q psy5751         145 -DELCWVDADSKSLECMTIRNRVR-RKVYSNCTYPFGLSIT-DEKYYWTDWKTNRIESANKE-GERAPSIALDMMGTTYM  220 (232)
Q Consensus       145 -~~Ly~~d~~~~~i~~~~~~g~~~-~~~~~~~~~p~gla~~-~~~ly~td~~~~~i~~~~~~-g~~~~~i~~~~~~~~~p  220 (232)
                       +.+..+-...+.|...++..... ..+........++++. .+.+.++-...+.|...+.. ++....+.   .+....
T Consensus       216 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~h~~~V  292 (317)
T d1vyhc1         216 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN---AHEHFV  292 (317)
T ss_dssp             -CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE---CCSSCE
T ss_pred             CCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEc---CCCCCE
Confidence             23333434456677777765443 2222233344567774 44445554556778888876 44444443   223344


Q ss_pred             EEEEEE
Q psy5751         221 YGIAAV  226 (232)
Q Consensus       221 ~gi~~~  226 (232)
                      ..+++-
T Consensus       293 ~~~~~s  298 (317)
T d1vyhc1         293 TSLDFH  298 (317)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            555543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.95  E-value=0.84  Score=35.48  Aligned_cols=138  Identities=10%  Similarity=-0.041  Sum_probs=84.5

Q ss_pred             EEEEeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCC-----CCCccEEEEeecCCeEEEEeC--------CCCeEEE
Q psy5751           4 GITVDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTN-----IRSPEGLTFDWVNRVLYWTDS--------QMDTISM   70 (232)
Q Consensus         4 ~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~-----~~~p~gl~~d~~~~~ly~~d~--------~~~~I~~   70 (232)
                      ++.|-+. +.+++.+  ++ .|+.++..+.....++...     ...+.++.+.+.++.|.++..        ..+.++.
T Consensus        21 ~~~W~~d-~~~~~~~--~~-~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l   96 (470)
T d2bgra1          21 SLRWISD-HEYLYKQ--EN-NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI   96 (470)
T ss_dssp             CCEECSS-SEEEEES--SS-CEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred             CCEeCCC-CEEEEEc--CC-cEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEE
Confidence            3445553 3333333  34 6899999877665555431     245688999988888777642        1346788


Q ss_pred             EeCCCCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCCcEEEEEcC-----------------CCC
Q psy5751          71 ANLNDDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTDREIFLKAA-----------------DLK  133 (232)
Q Consensus        71 ~~~~g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~~~~~~~~~-----------------~~~  133 (232)
                      +++.+.....+. ..-......+..|.+..|.+..    ...++..+..+.....+....                 ...
T Consensus        97 ~d~~~~~~~~l~-~~~~~~~~~~~SPDG~~ia~~~----~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~  171 (470)
T d2bgra1          97 YDLNKRQLITEE-RIPNNTQWVTWSPVGHKLAYVW----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS  171 (470)
T ss_dssp             EETTTTEECCSS-CCCTTEEEEEECSSTTCEEEEE----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred             EECCCCcccccc-cCCccccccccccCcceeeEee----cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecC
Confidence            898876543322 2333456777888777777765    235777777766544332211                 123


Q ss_pred             CcceEEEeCCCCEEEEE
Q psy5751         134 LPNSLAVDFRTDELCWV  150 (232)
Q Consensus       134 ~p~~l~~d~~~~~Ly~~  150 (232)
                      ...++..+|++.+|.+.
T Consensus       172 ~~~~~~wSPDGk~ia~~  188 (470)
T d2bgra1         172 AYSALWWSPNGTFLAYA  188 (470)
T ss_dssp             SSBCEEECTTSSEEEEE
T ss_pred             CccccEECCCCCcccee
Confidence            45678899998888776

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.03  E-value=1.4  Score=31.24  Aligned_cols=168  Identities=11%  Similarity=-0.013  Sum_probs=86.0

Q ss_pred             cEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEe-CCCCCceEEEEeCCCCeEE
Q psy5751          24 SIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVS-KDLVNPRGIVVHPYYRKLF  102 (232)
Q Consensus        24 ~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~iavd~~~~~ly  102 (232)
                      .+..+..........+..   .....++.+..+.+.++....+.+...++.......... .....+..++++|...+|.
T Consensus       102 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  178 (287)
T d1pgua2         102 DLLILQSFTGDIIKSVRL---NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA  178 (287)
T ss_dssp             EEEEEETTTCCEEEEEEC---SSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEE
T ss_pred             cceeeeccceeeeeeccc---cceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccc
Confidence            455555544333222222   223455665567777776666678888876544333222 2334567899999666666


Q ss_pred             EEEcCCCCCcEEEEeCCCCCcEEEEEcCCCCCcceEEEeCCC---------CEEEEEECCCCcEEEEecCC-CceEEEec
Q psy5751         103 WSDWNRSGPKIEWSNLDGTDREIFLKAADLKLPNSLAVDFRT---------DELCWVDADSKSLECMTIRN-RVRRKVYS  172 (232)
Q Consensus       103 ~~d~~~~~~~I~~~~~~g~~~~~~~~~~~~~~p~~l~~d~~~---------~~Ly~~d~~~~~i~~~~~~g-~~~~~~~~  172 (232)
                      ....   .++|...++.............-...+.+++.+..         +.++.+-+..+.|...+++. ........
T Consensus       179 ~g~~---dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~  255 (287)
T d1pgua2         179 AGDV---MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN  255 (287)
T ss_dssp             EEET---TSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT
T ss_pred             cccc---cccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeC
Confidence            6664   34577777764432211111112234566665532         33444545566777777654 22222222


Q ss_pred             -CCCceEEEEEE-CCEEEEEeCCCCcEE
Q psy5751         173 -NCTYPFGLSIT-DEKYYWTDWKTNRIE  198 (232)
Q Consensus       173 -~~~~p~gla~~-~~~ly~td~~~~~i~  198 (232)
                       ......++++. ++.++ |-...+.|.
T Consensus       256 ~h~~~V~~v~~~~~~~l~-s~g~D~~v~  282 (287)
T d1pgua2         256 AHKDGVNNLLWETPSTLV-SSGADACIK  282 (287)
T ss_dssp             SSTTCEEEEEEEETTEEE-EEETTSCEE
T ss_pred             CCCCCeEEEEECCCCEEE-EEECCCeEE
Confidence             33445677764 55544 433344443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.85  E-value=2.9  Score=32.70  Aligned_cols=104  Identities=11%  Similarity=0.122  Sum_probs=58.6

Q ss_pred             eEEEEeCCCCCCEEEEeCC----CC-CceEEEEeCCCCeEEEE--EcCCCCCcEEEEeCC-------CCCcEEEEEcCCC
Q psy5751          67 TISMANLNDDQPKVIVSKD----LV-NPRGIVVHPYYRKLFWS--DWNRSGPKIEWSNLD-------GTDREIFLKAADL  132 (232)
Q Consensus        67 ~I~~~~~~g~~~~~~~~~~----~~-~p~~iavd~~~~~ly~~--d~~~~~~~I~~~~~~-------g~~~~~~~~~~~~  132 (232)
                      .|..++..+...+.+..+.    .. ......+.+.++.++|.  ....+...++.+.+.       +...+.+.... .
T Consensus       281 ~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~-w  359 (465)
T d1xfda1         281 ILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD-W  359 (465)
T ss_dssp             EEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS-S
T ss_pred             eEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCC-c
Confidence            5778888877766665521    11 12234566656655443  112234567766542       22222222221 1


Q ss_pred             CCcceEEEeCCCCEEEEEECC----CCcEEEEecCCCceEEEe
Q psy5751         133 KLPNSLAVDFRTDELCWVDAD----SKSLECMTIRNRVRRKVY  171 (232)
Q Consensus       133 ~~p~~l~~d~~~~~Ly~~d~~----~~~i~~~~~~g~~~~~~~  171 (232)
                      .--.-+++|..++.+|++-..    ..++++++++|+....++
T Consensus       360 ~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~l  402 (465)
T d1xfda1         360 DVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCL  402 (465)
T ss_dssp             CEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCS
T ss_pred             eEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceee
Confidence            112235799999999998543    457999999988655443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.38  E-value=3  Score=32.11  Aligned_cols=104  Identities=11%  Similarity=0.010  Sum_probs=59.5

Q ss_pred             CEEEEEEcCCC-CcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCC------CCeEEEEeCCCCCCEEEEeC
Q psy5751          12 GQVYYSSVADK-SSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQ------MDTISMANLNDDQPKVIVSK   84 (232)
Q Consensus        12 ~~ly~~d~~~~-~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~   84 (232)
                      +.++|....++ ..|+.++.+|.....+. .+-....++ +.+.++.||++-..      ...|++++++|.....++..
T Consensus       332 ~~~~~~s~~dg~~~ly~~~~~g~~~~~lt-~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~  409 (470)
T d2bgra1         332 SFYKIISNEEGYRHICYFQIDKKDCTFIT-KGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSC  409 (470)
T ss_dssp             EEEEEEECTTSCEEEEEEETTCSCCEESC-CSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESST
T ss_pred             CcEEEEeccCcCceeEEEeccCCceeeec-cCCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecc
Confidence            33445443333 36888888887653333 333445554 44447889887543      23599999999876665542


Q ss_pred             C----CCCceEEEEeCCCCeEEEEEcCCCCCcEEEEe
Q psy5751          85 D----LVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSN  117 (232)
Q Consensus        85 ~----~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~  117 (232)
                      .    ...-..++++|..+++..+-.+...+.+...+
T Consensus       410 ~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~  446 (470)
T d2bgra1         410 ELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHS  446 (470)
T ss_dssp             TTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEE
T ss_pred             cccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEE
Confidence            2    22335788998656544444443333344443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.07  E-value=6.3  Score=30.65  Aligned_cols=143  Identities=11%  Similarity=0.018  Sum_probs=74.1

Q ss_pred             EEEeCCCCEEEEE--EcCCC-CcEEEEEcCCCceeEEEeCC-CC----CccEEEEeecCCeEEEE---eC-CCCeEEEEe
Q psy5751           5 ITVDCVEGQVYYS--SVADK-SSIKRAHLDGKNVEDVITTN-IR----SPEGLTFDWVNRVLYWT---DS-QMDTISMAN   72 (232)
Q Consensus         5 i~~d~~~~~ly~~--d~~~~-~~i~~~~~~g~~~~~~~~~~-~~----~p~gl~~d~~~~~ly~~---d~-~~~~I~~~~   72 (232)
                      +.|.+ ++.+++.  +-..+ ..|..++.......+++... -.    ......+.+.++.++|.   +. +.+.++.+.
T Consensus       260 ~~W~~-d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~  338 (465)
T d1xfda1         260 VKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHIT  338 (465)
T ss_dssp             EEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEE
T ss_pred             eEEcC-CCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEE
Confidence            45544 4444433  32333 25667777765554554321 11    11234566656655543   22 234566654


Q ss_pred             CC-------CCCCEEEEeCCCCCceEEEEeCCCCeEEEEEcCCC--CCcEEEEeCCCCCcEEEEEcCC--CCCcceEEEe
Q psy5751          73 LN-------DDQPKVIVSKDLVNPRGIVVHPYYRKLFWSDWNRS--GPKIEWSNLDGTDREIFLKAAD--LKLPNSLAVD  141 (232)
Q Consensus        73 ~~-------g~~~~~~~~~~~~~p~~iavd~~~~~ly~~d~~~~--~~~I~~~~~~g~~~~~~~~~~~--~~~p~~l~~d  141 (232)
                      +.       +...+.+......--.-+++|+.++.+|++.....  ..++++++++|.....++....  ...-..++|+
T Consensus       339 ~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S  418 (465)
T d1xfda1         339 VSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFS  418 (465)
T ss_dssp             EECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEEC
T ss_pred             eccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEEC
Confidence            32       22223333222211123469998999999875422  4579999999986554443220  1123477888


Q ss_pred             CCCCEEE
Q psy5751         142 FRTDELC  148 (232)
Q Consensus       142 ~~~~~Ly  148 (232)
                      ++.+.+.
T Consensus       419 ~~~~y~v  425 (465)
T d1xfda1         419 HSMDFFL  425 (465)
T ss_dssp             TTSSEEE
T ss_pred             CCCCEEE
Confidence            8765543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.68  E-value=6.6  Score=27.51  Aligned_cols=158  Identities=11%  Similarity=0.018  Sum_probs=84.0

Q ss_pred             eEEEEEeCCCCEEEEEEcCCCCcEEEEEcCCCc-eeEEEe--CCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCC
Q psy5751           2 LIGITVDCVEGQVYYSSVADKSSIKRAHLDGKN-VEDVIT--TNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQP   78 (232)
Q Consensus         2 ~~~i~~d~~~~~ly~~d~~~~~~i~~~~~~g~~-~~~~~~--~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~   78 (232)
                      ..+++|++..+.|..+. .++ .|...+++... ..++..  ..-..+..+++.+.++.+.++-...+.|...++.....
T Consensus        14 I~~l~fsp~~~~L~s~s-~Dg-~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~   91 (342)
T d1yfqa_          14 ISDIKIIPSKSLLLITS-WDG-SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS   91 (342)
T ss_dssp             EEEEEEEGGGTEEEEEE-TTS-EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred             EEEEEEeCCCCEEEEEE-CCC-eEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccc
Confidence            35899999777776655 344 67777765432 222221  22356788888776666666766778899999887776


Q ss_pred             EEEEeCCCCCce-EEEEeCCCCeEEEEEcCCCCCcEEEEeCCCCC--cEEEEEcC---CCCCcceEEEeCCCCEEEEEEC
Q psy5751          79 KVIVSKDLVNPR-GIVVHPYYRKLFWSDWNRSGPKIEWSNLDGTD--REIFLKAA---DLKLPNSLAVDFRTDELCWVDA  152 (232)
Q Consensus        79 ~~~~~~~~~~p~-~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~~--~~~~~~~~---~~~~p~~l~~d~~~~~Ly~~d~  152 (232)
                      ............ .....+....+.....   ...+...++....  ........   .......+.+......++.+ .
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  167 (342)
T d1yfqa_          92 FQALTNNEANLGICRICKYGDDKLIAASW---DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVG-M  167 (342)
T ss_dssp             EEECBSCCCCSCEEEEEEETTTEEEEEET---TSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEE-E
T ss_pred             ccccccccccccccccccccccccccccc---ccccceeeccccccceeeecccccccccceeeeeeeeccCCceeee-c
Confidence            555543322222 2233332344433332   2335544442221  11111111   11223445566654555444 4


Q ss_pred             CCCcEEEEecCCC
Q psy5751         153 DSKSLECMTIRNR  165 (232)
Q Consensus       153 ~~~~i~~~~~~g~  165 (232)
                      ..+.|...+++..
T Consensus       168 ~d~~i~~~~~~~~  180 (342)
T d1yfqa_         168 NNSQVQWFRLPLC  180 (342)
T ss_dssp             STTEEEEEESSCC
T ss_pred             CCCcEEEEecccC
Confidence            4667777777643

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.47  E-value=6.7  Score=26.81  Aligned_cols=105  Identities=14%  Similarity=0.120  Sum_probs=56.3

Q ss_pred             EeCCCCEEEEEEcCCCCcEEEEEcCCCceeEEEeCCCCCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEEEEeCCC
Q psy5751           7 VDCVEGQVYYSSVADKSSIKRAHLDGKNVEDVITTNIRSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKVIVSKDL   86 (232)
Q Consensus         7 ~d~~~~~ly~~d~~~~~~i~~~~~~g~~~~~~~~~~~~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~   86 (232)
                      +++.++.|+ +-..++ .|...+++.......+......+..|+.+  ++. .++-...+.|...++.............
T Consensus        21 ~~~d~~~l~-sgs~Dg-~i~vWd~~~~~~~~~l~~H~~~V~~v~~~--~~~-l~s~s~D~~i~~~~~~~~~~~~~~~~~~   95 (293)
T d1p22a2          21 LQYDDQKIV-SGLRDN-TIKIWDKNTLECKRILTGHTGSVLCLQYD--ERV-IITGSSDSTVRVWDVNTGEMLNTLIHHC   95 (293)
T ss_dssp             EECCSSEEE-EEESSS-CEEEEESSSCCEEEEECCCSSCEEEEECC--SSE-EEEEETTSCEEEEESSSCCEEEEECCCC
T ss_pred             EEEcCCEEE-EEeCCC-eEEEEECCCCcEEEEEecCCCCEeeeecc--cce-eecccccccccccccccccccccccccc
Confidence            344345444 444455 78888988655444444333455556554  444 4465566788888887766555443222


Q ss_pred             CCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy5751          87 VNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDGT  121 (232)
Q Consensus        87 ~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g~  121 (232)
                        ..........+.+......   +.+...++...
T Consensus        96 --~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  125 (293)
T d1p22a2          96 --EAVLHLRFNNGMMVTCSKD---RSIAVWDMASP  125 (293)
T ss_dssp             --SCEEEEECCTTEEEEEETT---SCEEEEECSSS
T ss_pred             --cccccccccccceeecccc---cceeEeecccc
Confidence              2233344435555555533   23444444433

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.34  E-value=7.4  Score=27.22  Aligned_cols=116  Identities=9%  Similarity=-0.082  Sum_probs=66.5

Q ss_pred             CCccEEEEeecCCeEEEEeCCCCeEEEEeCCCCCCEE-EEe--CCCCCceEEEEeCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy5751          44 RSPEGLTFDWVNRVLYWTDSQMDTISMANLNDDQPKV-IVS--KDLVNPRGIVVHPYYRKLFWSDWNRSGPKIEWSNLDG  120 (232)
Q Consensus        44 ~~p~gl~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~-~~~--~~~~~p~~iavd~~~~~ly~~d~~~~~~~I~~~~~~g  120 (232)
                      ..+.+|++.+.++.|..+ ...+.|...+++...... +..  ........+++.+..+.+.++-..  .+.|...++..
T Consensus        12 d~I~~l~fsp~~~~L~s~-s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~--d~~v~~w~~~~   88 (342)
T d1yfqa_          12 DYISDIKIIPSKSLLLIT-SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV--QGEILKVDLIG   88 (342)
T ss_dssp             SCEEEEEEEGGGTEEEEE-ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET--TSCEEEECSSS
T ss_pred             CCEEEEEEeCCCCEEEEE-ECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccc--ccceeeeeccc
Confidence            467899999977776654 455788888876654322 221  244456788888766665555432  45688888776


Q ss_pred             CCcEEEEEcCCCCCcceEEEeCCCCEEEEEECCCCcEEEEecC
Q psy5751         121 TDREIFLKAADLKLPNSLAVDFRTDELCWVDADSKSLECMTIR  163 (232)
Q Consensus       121 ~~~~~~~~~~~~~~p~~l~~d~~~~~Ly~~d~~~~~i~~~~~~  163 (232)
                      .......... ............+.....+-...+.+...+++
T Consensus        89 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~  130 (342)
T d1yfqa_          89 SPSFQALTNN-EANLGICRICKYGDDKLIAASWDGLIEVIDPR  130 (342)
T ss_dssp             SSSEEECBSC-CCCSCEEEEEEETTTEEEEEETTSEEEEECHH
T ss_pred             cccccccccc-ccccccccccccccccccccccccccceeecc
Confidence            6655544432 22222232222223334444455666666554