Psyllid ID: psy5800

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMKEA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEccccEEEEEEcccccccccccccccccccccHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHcHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEccccccccccccccEEEEEEccccEEEEEccccccccccHHHccccccHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
VFSVVREQITRAlssqpaslDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGylvegtrftkyssrgqviildkfwyvrlspnhkvfqygdcdeksipqldhlpnklpvaDIKALlvgkdcphmkea
Flexible Loop (DISEMBL)
VFSVVREQItralssqpasldkFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGtrftkyssrgqVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKdcphmkea
Low Complexity Region (SEG)
VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMKEA
Disordered region (IsUnstruct)
**********************FRANISRLTYSEITNLWQQ*******WESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGK********
Disordered Region (DISOPRED)
VFSVVREQITRALSSQPASLDKFRANISRLTYSEI*******************PIVELKELITPEIVDLIQQQRLGYLVEGTR****************WYVRLSPNHKVFQYGDCDEKSI****HLPNKLPVADIKALLVGKDCPH****
Disordered Region (DISEMBL)
VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQ**********SHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMKEA
Disordered Region (DISPRO)
VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDC******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMKEA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q92556	727	Engulfment and cell motil	yes	N/A	0.953	0.199	0.545	5e-41
Q8BPU7	727	Engulfment and cell motil	yes	N/A	0.953	0.199	0.545	5e-41
A4FUD6	720	Engulfment and cell motil	no	N/A	0.947	0.2	0.535	5e-38
Q96JJ3	720	Engulfment and cell motil	no	N/A	0.947	0.2	0.535	5e-38
Q5RCC1	720	Engulfment and cell motil	no	N/A	0.947	0.2	0.535	1e-37
Q8BHL5	732	Engulfment and cell motil	no	N/A	0.947	0.196	0.529	2e-37
Q96BJ8	720	Engulfment and cell motil	no	N/A	0.960	0.202	0.519	3e-36
Q8BYZ7	720	Engulfment and cell motil	no	N/A	0.960	0.202	0.519	5e-36
A6QR40	652	Engulfment and cell motil	no	N/A	0.960	0.223	0.519	1e-35
Q499U2	720	Engulfment and cell motil	no	N/A	0.960	0.202	0.513	5e-35

>sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1 PE=1 SV=2

 Score =  166 bits (420), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 115/154 (74%), Gaps = 9/154 (5%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VV+EQ+ RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct: 480 VMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 537

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV  YGD +E 
Sbjct: 538 EKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQ---DKFWYCRLSPNHKVLHYGDLEES 594

Query: 121 ---SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
               +P  D L +KLPVADIKA++ GKDCPHMKE
Sbjct: 595 PQGEVPH-DSLQDKLPVADIKAVVTGKDCPHMKE 627

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.
Homo sapiens (taxid: 9606)

>sp|Q8BPU7|ELMO1_MOUSE Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1 PE=1 SV=2

 Score =  166 bits (420), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 115/154 (74%), Gaps = 9/154 (5%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VV+EQ+ RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct: 480 VMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 537

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV  YGD +E 
Sbjct: 538 EKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQ---DKFWYCRLSPNHKVLHYGDLEES 594

Query: 121 ---SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
               +P  D L +KLPVADIKA++ GKDCPHMKE
Sbjct: 595 PQGEVPH-DSLQDKLPVADIKAVVTGKDCPHMKE 627

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Mus musculus (taxid: 10090)

>sp|A4FUD6|ELMO2_BOVIN Engulfment and cell motility protein 2 OS=Bos taurus GN=ELMO2 PE=2 SV=1

 Score =  156 bits (394), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 109/155 (70%), Gaps = 11/155 (7%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQITRAL S+P SLD+F++ +  L+YSEI  L Q ER S+++++S   PIVEL+
Sbjct: 473 VMQVVREQITRALPSKPNSLDQFKSKLRSLSYSEILRLRQSERMSQDDFQS--PPIVELR 530

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E I PEI++LI+QQRL  L EG+ F K  +R +    ++FWY RL+ NHKV  YGD D+ 
Sbjct: 531 EKIQPEILELIKQQRLNRLCEGSSFRKIGNRRRQ---ERFWYCRLALNHKVLHYGDLDDN 587

Query: 121 SIPQ----LDHLPNKLPVADIKALLVGKDCPHMKE 151
             PQ     + L  K+PVADIKA++ GKDCPHMKE
Sbjct: 588 --PQGEVTFESLQEKIPVADIKAIVTGKDCPHMKE 620

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Bos taurus (taxid: 9913)

>sp|Q96JJ3|ELMO2_HUMAN Engulfment and cell motility protein 2 OS=Homo sapiens GN=ELMO2 PE=1 SV=2

 Score =  156 bits (394), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 109/155 (70%), Gaps = 11/155 (7%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQITRAL S+P SLD+F++ +  L+YSEI  L Q ER S+++++S   PIVEL+
Sbjct: 473 VMQVVREQITRALPSKPNSLDQFKSKLRSLSYSEILRLRQSERMSQDDFQS--PPIVELR 530

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E I PEI++LI+QQRL  L EG+ F K  +R +    ++FWY RL+ NHKV  YGD D+ 
Sbjct: 531 EKIQPEILELIKQQRLNRLCEGSSFRKIGNRRRQ---ERFWYCRLALNHKVLHYGDLDDN 587

Query: 121 SIPQ----LDHLPNKLPVADIKALLVGKDCPHMKE 151
             PQ     + L  K+PVADIKA++ GKDCPHMKE
Sbjct: 588 --PQGEVTFESLQEKIPVADIKAIVTGKDCPHMKE 620

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Homo sapiens (taxid: 9606)

>sp|Q5RCC1|ELMO2_PONAB Engulfment and cell motility protein 2 OS=Pongo abelii GN=ELMO2 PE=2 SV=1

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 108/155 (69%), Gaps = 11/155 (7%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQITRAL S+P SLD+F++ +  L+YSEI  L Q ER S+++++S   PIVEL+
Sbjct: 473 VMQVVREQITRALPSKPNSLDQFKSKLRSLSYSEILRLRQSERMSQDDFQS--PPIVELR 530

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E I PEI++LI+QQRL  L EG+ F K  +R +    ++FWY RL+ NHKV  YGD D+ 
Sbjct: 531 EKIQPEILELIKQQRLNRLCEGSSFRKIGNRRRQ---ERFWYCRLALNHKVLHYGDLDDN 587

Query: 121 SIPQ----LDHLPNKLPVADIKALLVGKDCPHMKE 151
             PQ     + L  K PVADIKA++ GKDCPHMKE
Sbjct: 588 --PQGEVTFESLQEKTPVADIKAIVTGKDCPHMKE 620

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Pongo abelii (taxid: 9601)

>sp|Q8BHL5|ELMO2_MOUSE Engulfment and cell motility protein 2 OS=Mus musculus GN=Elmo2 PE=1 SV=1

 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/155 (52%), Positives = 109/155 (70%), Gaps = 11/155 (7%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQITRAL S+P SLD+F++ +  L+YSEI  L Q ER S+++++S   PIVEL+
Sbjct: 485 VMQVVREQITRALPSKPNSLDQFKSKLRSLSYSEILRLRQSERMSQDDFQS--PPIVELR 542

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E I PEI++LI+QQRL  L EG+ F K  +R +    ++FW+ RL+ NHKV  YGD D+ 
Sbjct: 543 EKIQPEILELIKQQRLNRLCEGSSFRKIGNRRRQ---ERFWHCRLALNHKVLHYGDLDDN 599

Query: 121 SIPQ----LDHLPNKLPVADIKALLVGKDCPHMKE 151
             PQ     + L  K+PVADIKA++ GKDCPHMKE
Sbjct: 600 --PQGEVTFESLQEKIPVADIKAIVTGKDCPHMKE 632

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Mus musculus (taxid: 10090)

>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3 PE=2 SV=3

 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/152 (51%), Positives = 104/152 (68%), Gaps = 6/152 (3%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQ+ R L+ +P SL+ FR  ++ LTY E+  L Q ER  +E   + A PI+EL+
Sbjct: 467 VMQVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELR 524

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDE- 119
           E + PE++ LI+QQRL  L EGT F K SSR +    DK W+  LSPNHK+ QYGD +E 
Sbjct: 525 EKLKPELMGLIRQQRLLRLCEGTLFRKISSRRRQ---DKLWFCCLSPNHKLLQYGDMEEG 581

Query: 120 KSIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
            S P L+ LP +LPVAD++ALL GKDCPH++E
Sbjct: 582 ASPPTLESLPEQLPVADMRALLTGKDCPHVRE 613

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Homo sapiens (taxid: 9606)

>sp|Q8BYZ7|ELMO3_MOUSE Engulfment and cell motility protein 3 OS=Mus musculus GN=Elmo3 PE=1 SV=2

 Score =  149 bits (377), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 79/152 (51%), Positives = 104/152 (68%), Gaps = 6/152 (3%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQ+ R L+ +P SL+ FR  ++ LTY E+  L Q ER  +E   + A PI+EL+
Sbjct: 467 VMQVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQEG--TLAPPILELR 524

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E + PE++ LI+QQRL  L EG  F K SSR +    DK W+  LSPNHKV QYGD +E 
Sbjct: 525 EKLKPELMGLIRQQRLLRLCEGMLFRKISSRRRQ---DKLWFCCLSPNHKVLQYGDVEEG 581

Query: 121 SIP-QLDHLPNKLPVADIKALLVGKDCPHMKE 151
           + P  L+ LP +LPVADI+ALL+GKDCPH++E
Sbjct: 582 AKPPTLESLPEQLPVADIRALLMGKDCPHVRE 613

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Mus musculus (taxid: 10090)

>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/152 (51%), Positives = 103/152 (67%), Gaps = 6/152 (3%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQ+ R L+ +P+SL+ FR  ++ LTY E+  L Q ER  +E   + A PI+EL+
Sbjct: 467 VMQVVREQLARTLALKPSSLELFRTKVNALTYGEVLRLRQTERLHQE--GTLAPPILELR 524

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E + PE++ LI+QQRL  L EGT F K SSR +    DK W+  LSPNHKV QYGD +E 
Sbjct: 525 EKLKPELMGLIRQQRLLRLCEGTLFHKISSRRRQ---DKLWFCCLSPNHKVLQYGDVEEG 581

Query: 121 -SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
              P  + LP +LPVADI+ALL GKDCPH++E
Sbjct: 582 VGPPTPESLPEQLPVADIRALLTGKDCPHVRE 613

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Bos taurus (taxid: 9913)

>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1

 Score =  146 bits (368), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 78/152 (51%), Positives = 103/152 (67%), Gaps = 6/152 (3%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V  VVREQ+ R L+ +P SL+ FR  ++ LTY E+  L Q ER  +E   + A PI+EL+
Sbjct: 467 VMQVVREQLARTLALKPTSLELFRTKVNALTYGEVLRLRQTERLHQE--GTLAPPILELR 524

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E + PE++ LI+QQRL  L EG  F K SSR +    DK W+  LSPNHKV QYGD +E 
Sbjct: 525 EKLKPELMGLIRQQRLLRLCEGMLFRKISSRRRQ---DKLWFCCLSPNHKVLQYGDVEEG 581

Query: 121 SI-PQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           +  P L+ L  +LPVADI+ALL+GKDCPH++E
Sbjct: 582 ANPPTLESLTEQLPVADIRALLMGKDCPHVRE 613

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
242014288	726	Engulfment and cell motility protein, pu	0.986	0.206	0.788	7e-67
380011794	726	PREDICTED: engulfment and cell motility	0.986	0.206	0.761	2e-64
328787907	726	PREDICTED: engulfment and cell motility	0.986	0.206	0.761	2e-64
340728347	726	PREDICTED: engulfment and cell motility	0.986	0.206	0.761	2e-64
350403028	726	PREDICTED: engulfment and cell motility	0.986	0.206	0.761	2e-64
345488647	726	PREDICTED: engulfment and cell motility	0.986	0.206	0.761	2e-64
383850439	765	PREDICTED: engulfment and cell motility	0.986	0.196	0.761	2e-64
307172364	719	Engulfment and cell motility protein 1 [	0.986	0.208	0.741	8e-64
307191605	719	Engulfment and cell motility protein 1 [	0.986	0.208	0.741	2e-63
328710276	733	PREDICTED: engulfment and cell motility	0.993	0.206	0.75	2e-63

>gi|242014288|ref|XP_002427823.1| Engulfment and cell motility protein, putative [Pediculus humanus corporis] gi|212512292|gb|EEB15085.1| Engulfment and cell motility protein, putative [Pediculus humanus corporis]

 Score =  258 bits (658), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 119/151 (78%), Positives = 136/151 (90%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL+SQP  +DKF+A +S LTYSEITNLWQQERTSREEWESHA+PIV+L+
Sbjct: 480 VFSVVREQITRALASQPFGMDKFKAKLSTLTYSEITNLWQQERTSREEWESHARPIVQLR 539

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI+DLIQ+QRLG+LV+GTRFTKYSSRGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 540 EKITPEIIDLIQKQRLGFLVDGTRFTKYSSRGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 598

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           + P L+ LPNKL V DIK+L+ GK+CPHMK+
Sbjct: 599 NNPALEELPNKLAVIDIKSLVTGKECPHMKD 629

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011794|ref|XP_003689979.1| PREDICTED: engulfment and cell motility protein 1-like [Apis florea]

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 131/151 (86%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL  +P  LDKF+  + +LTYS ITNLWQQERTSREEWESHA+PIVEL+
Sbjct: 478 VFSVVREQITRALQCKPTGLDKFKNKLQQLTYSTITNLWQQERTSREEWESHARPIVELR 537

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI++LIQQQRLG+LVEGTRF KYS+RGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 538 EQITPEILELIQQQRLGFLVEGTRFMKYSARGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 596

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ALL G+DCPHMK+
Sbjct: 597 SVPTIDELPTKLAVVEIRALLTGRDCPHMKD 627

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787907|ref|XP_395913.3| PREDICTED: engulfment and cell motility protein 1 [Apis mellifera]

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 131/151 (86%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL  +P  LDKF+  + +LTYS ITNLWQQERTSREEWESHA+PIVEL+
Sbjct: 478 VFSVVREQITRALQCKPTGLDKFKNKLQQLTYSTITNLWQQERTSREEWESHARPIVELR 537

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI++LIQQQRLG+LVEGTRF KYS+RGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 538 EQITPEILELIQQQRLGFLVEGTRFMKYSARGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 596

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ALL G+DCPHMK+
Sbjct: 597 SVPTIDELPTKLAVVEIRALLTGRDCPHMKD 627

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728347|ref|XP_003402487.1| PREDICTED: engulfment and cell motility protein 1-like [Bombus terrestris]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 132/151 (87%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL  +P +LDKF+  + +LTYS ITNLWQQERTSREEWESHA+PIVEL+
Sbjct: 478 VFSVVREQITRALQCKPTALDKFKNKLQQLTYSTITNLWQQERTSREEWESHARPIVELR 537

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI++LIQQQRLG+LVEGTRF KYS+RGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 538 EQITPEILELIQQQRLGFLVEGTRFMKYSARGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 596

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ALL G+DCPHMK+
Sbjct: 597 SVPTIDELPTKLAVVEIRALLTGRDCPHMKD 627

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403028|ref|XP_003486680.1| PREDICTED: engulfment and cell motility protein 1-like [Bombus impatiens]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 132/151 (87%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL  +P +LDKF+  + +LTYS ITNLWQQERTSREEWESHA+PIVEL+
Sbjct: 478 VFSVVREQITRALQCKPTALDKFKNKLQQLTYSTITNLWQQERTSREEWESHARPIVELR 537

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI++LIQQQRLG+LVEGTRF KYS+RGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 538 EQITPEILELIQQQRLGFLVEGTRFMKYSARGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 596

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ALL G+DCPHMK+
Sbjct: 597 SVPTIDELPTKLAVVEIRALLTGRDCPHMKD 627

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345488647|ref|XP_001603757.2| PREDICTED: engulfment and cell motility protein 1-like [Nasonia vitripennis]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 131/151 (86%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL S+P  LDKF+  + +LTYS ITNLWQQERTSREEWESHA+PI+ELK
Sbjct: 479 VFSVVREQITRALESKPTGLDKFKNKLQQLTYSHITNLWQQERTSREEWESHARPILELK 538

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITP+I+ LIQQQRLG+LVEGTRFTKYS+RGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 539 EQITPDIMVLIQQQRLGFLVEGTRFTKYSTRGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 597

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ LL G+DCPHMK+
Sbjct: 598 SVPSIDELPTKLAVVEIRGLLTGRDCPHMKD 628

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850439|ref|XP_003700803.1| PREDICTED: engulfment and cell motility protein 1 [Megachile rotundata]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 130/151 (86%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL  +P  LDKF+  + +LTYS ITNLWQQERTSREEWESHA+PIVEL+
Sbjct: 517 VFSVVREQITRALQFKPTGLDKFKNKLQQLTYSTITNLWQQERTSREEWESHARPIVELR 576

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI+DLIQQQRLG+LVEGTRF KYS+RGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 577 EQITPEILDLIQQQRLGFLVEGTRFMKYSARGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 635

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ LL G+DCPHMK+
Sbjct: 636 SVPTIDELPTKLAVVEIRGLLTGRDCPHMKD 666

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172364|gb|EFN63835.1| Engulfment and cell motility protein 1 [Camponotus floridanus]

 Score =  248 bits (632), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/151 (74%), Positives = 131/151 (86%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL  +P  LDKF+  + +LTYS ITNLWQQERTSREEWESHA+PIVEL+
Sbjct: 471 VFSVVREQITRALQCKPTGLDKFKNKLQQLTYSTITNLWQQERTSREEWESHARPIVELR 530

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI++LIQQQRLG+LV+GTRF KYS+RGQ  + DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 531 EQITPEILELIQQQRLGFLVQGTRFMKYSARGQR-VKDKFWYVRLSPNHKVFHYGDCDEK 589

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ LL+G+DCPHMK+
Sbjct: 590 SVPTIDELPTKLAVVEIRGLLIGRDCPHMKD 620

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191605|gb|EFN75102.1| Engulfment and cell motility protein 1 [Harpegnathos saltator]

 Score =  246 bits (628), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 112/151 (74%), Positives = 131/151 (86%), Gaps = 1/151 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           VFSVVREQITRAL  +P  LDKF++ + +LTYS ITNLWQQERTSREEWESHA+PIVEL+
Sbjct: 471 VFSVVREQITRALQCKPTGLDKFKSKLQQLTYSTITNLWQQERTSREEWESHARPIVELR 530

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           E ITPEI++LIQQQRLG+LV+GTRF KYS+RGQ  I DKFWYVRLSPNHKVF YGDCDEK
Sbjct: 531 EQITPEILELIQQQRLGFLVQGTRFMKYSARGQR-IKDKFWYVRLSPNHKVFHYGDCDEK 589

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
           S+P +D LP KL V +I+ L+ G+DCPHMK+
Sbjct: 590 SVPTIDDLPTKLAVVEIRHLITGRDCPHMKD 620

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328710276|ref|XP_001945196.2| PREDICTED: engulfment and cell motility protein 1-like [Acyrthosiphon pisum]

 Score =  246 bits (628), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/152 (75%), Positives = 132/152 (86%), Gaps = 1/152 (0%)

Query: 1   VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
           V SVVREQITRAL SQPA+L+K R  +S LTYSEITNLWQQERTSRE+WESHA+PIV+LK
Sbjct: 483 VLSVVREQITRALGSQPANLEKLRQKLSTLTYSEITNLWQQERTSREQWESHARPIVQLK 542

Query: 61  ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
           EL+TPEIV LI++QRL Y+V+GTRFTKYS RGQ  + DKFW+VRLS NHKV  YGDCD+K
Sbjct: 543 ELVTPEIVQLIKKQRLNYMVDGTRFTKYSQRGQR-VKDKFWFVRLSQNHKVLHYGDCDDK 601

Query: 121 SIPQLDHLPNKLPVADIKALLVGKDCPHMKEA 152
           S+P ++ LPNKL V DIKALL GKDCPHMK+A
Sbjct: 602 SVPTIEELPNKLGVVDIKALLTGKDCPHMKDA 633

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
FB|FBgn0032409	724	Ced-12 "Ced-12" [Drosophila me	0.973	0.204	0.633	7.6e-46
UNIPROTKB|F1NFA5	744	ELMO1 "Uncharacterized protein	0.967	0.197	0.555	1.2e-38
UNIPROTKB|E1BXG8	728	ELMO1 "Uncharacterized protein	0.960	0.200	0.555	1.4e-38
UNIPROTKB|E2R7G8	727	ELMO1 "Uncharacterized protein	0.960	0.200	0.549	2.3e-38
ZFIN|ZDB-GENE-040426-2069	726	elmo1 "engulfment and cell mot	0.960	0.201	0.562	3e-38
UNIPROTKB|Q5EAA6	247	ELMO1 "Uncharacterized protein	0.940	0.578	0.546	3.4e-38
UNIPROTKB|F1SIM4	247	ELMO1 "Uncharacterized protein	0.940	0.578	0.546	3.4e-38
UNIPROTKB|Q92556	727	ELMO1 "Engulfment and cell mot	0.960	0.200	0.542	3.8e-38
MGI|MGI:2153044	727	Elmo1 "engulfment and cell mot	0.960	0.200	0.542	3.8e-38
RGD|1308182	727	Elmo1 "engulfment and cell mot	0.960	0.200	0.542	3.8e-38

FB|FBgn0032409 Ced-12 "Ced-12" [Drosophila melanogaster (taxid:7227)]

 Score = 484 (175.4 bits), Expect = 7.6e-46, P = 7.6e-46
 Identities = 95/150 (63%), Positives = 115/150 (76%)

Query:     2 FSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKE 61
             FSVVREQI R L  +P +LD FR  I+ LTY +IT L QQERTS+EE +S A  IV+LKE
Sbjct:   479 FSVVREQIQRTLKGRPENLDDFRNKIALLTYQQITTLRQQERTSKEECDSTASAIVKLKE 538

Query:    62 LITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKS 121
              I+P+I++LI+QQRL +LVEGT F KY  RG     DKFWY RLSPNHKV  YGDCDEK+
Sbjct:   539 KISPQILELIKQQRLSFLVEGTHFAKYL-RG-TRTKDKFWYARLSPNHKVIHYGDCDEKT 596

Query:   122 IPQLDHLPNKLPVADIKALLVGKDCPHMKE 151
             IP ++ LP KLP+++IK LL GK+CPHMKE
Sbjct:   597 IPTMEELPKKLPISEIKQLLEGKECPHMKE 626

GO:0016477 "cell migration" evidence=IGI

GO:0007015 "actin filament organization" evidence=IMP

GO:0006909 "phagocytosis" evidence=IEA

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0032863 "activation of Rac GTPase activity" evidence=IGI

GO:0007520 "myoblast fusion" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0007417 "central nervous system development" evidence=IMP

UNIPROTKB|F1NFA5 ELMO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 420 (152.9 bits), Expect = 1.2e-38, P = 1.2e-38
 Identities = 85/153 (55%), Positives = 115/153 (75%)

Query:     1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
             V  VV+EQI RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct:   496 VMQVVKEQIMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 553

Query:    61 ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
             E I PEI++LI+QQRL  LVEGT F K +SR +    DKFWY RLSPNHKV  YGD +E 
Sbjct:   554 EKIQPEILELIKQQRLNRLVEGTCFRKLNSRRRQA--DKFWYCRLSPNHKVLHYGDLEES 611

Query:   121 SIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
                ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   612 PQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 644

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IEA

GO:0006928 "cellular component movement" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|E1BXG8 ELMO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 419 (152.6 bits), Expect = 1.4e-38, P = 1.4e-38
 Identities = 85/153 (55%), Positives = 115/153 (75%)

Query:     1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
             V  VV+EQI RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct:   481 VMQVVKEQIMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 538

Query:    61 ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
             E I PEI++LI+QQRL  LVEGT F K +SR +    DKFWY RLSPNHKV  YGD +E 
Sbjct:   539 EKIQPEILELIKQQRLNRLVEGTCFRKLNSRRRQ---DKFWYCRLSPNHKVLHYGDLEES 595

Query:   121 SIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
                ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   596 PQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 628

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

UNIPROTKB|E2R7G8 ELMO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 417 (151.9 bits), Expect = 2.3e-38, P = 2.3e-38
 Identities = 84/153 (54%), Positives = 114/153 (74%)

Query:     1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
             V  VV+EQ+ RAL+++P+SLD+F+  +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct:   480 VMQVVKEQVMRALTTKPSSLDQFKCKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 537

Query:    61 ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
             E I PEI++LI+QQRL  LVEGT F K +SR +    DKFWY RLSPNHKV  YGD +E 
Sbjct:   538 EKIQPEILELIKQQRLNRLVEGTCFRKLNSRRRQ---DKFWYCRLSPNHKVLHYGDLEES 594

Query:   121 SIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
                ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   595 PQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 627

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=IEA

GO:0006928 "cellular component movement" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

ZFIN|ZDB-GENE-040426-2069 elmo1 "engulfment and cell motility 1 (ced-12 homolog, C. elegans)" [Danio rerio (taxid:7955)]

 Score = 416 (151.5 bits), Expect = 3.0e-38, P = 3.0e-38
 Identities = 86/153 (56%), Positives = 113/153 (73%)

Query:     1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
             V  VV+EQITRAL+ +P SLD+F++ +  L+Y+EI  L Q ER ++E+++S  +PI+EL+
Sbjct:   479 VMQVVKEQITRALTIKPNSLDQFKSRLQNLSYTEILKLRQSERMNQEDFQS--RPILELR 536

Query:    61 ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
             E I PEI++LI+QQRL  L EGT F K SSR +    DKFWY RLSPNHKV  YGD +E 
Sbjct:   537 EKIQPEIMELIKQQRLNRLCEGTCFRKISSRRRQ---DKFWYCRLSPNHKVLHYGDLEES 593

Query:   121 SIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
                ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   594 PQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 626

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0001946 "lymphangiogenesis" evidence=IMP

GO:0045766 "positive regulation of angiogenesis" evidence=IMP

UNIPROTKB|Q5EAA6 ELMO1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 82/150 (54%), Positives = 113/150 (75%)

Query:     4 VVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELI 63
             VV+EQ+ RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELKE I
Sbjct:     3 VVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEKI 60

Query:    64 TPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIP 123
              PEI++LI+QQRL  LVEGT F K + R +    DKFWY RLSPNHKV  YGD +E    
Sbjct:    61 QPEILELIKQQRLNRLVEGTCFRKLNCRRRQ---DKFWYCRLSPNHKVLHYGDLEESPQG 117

Query:   124 QLDH--LPNKLPVADIKALLVGKDCPHMKE 151
             ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   118 EVPHDSLQDKLPVADIKAVVTGKDCPHMKE 147

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=IEA

GO:0006928 "cellular component movement" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1SIM4 ELMO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 82/150 (54%), Positives = 113/150 (75%)

Query:     4 VVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELI 63
             VV+EQ+ RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELKE I
Sbjct:     3 VVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELKEKI 60

Query:    64 TPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIP 123
              PEI++LI+QQRL  LVEGT F K + R +    DKFWY RLSPNHKV  YGD +E    
Sbjct:    61 QPEILELIKQQRLNRLVEGTCFRKLNCRRRQ---DKFWYCRLSPNHKVLHYGDLEESPQG 117

Query:   124 QLDH--LPNKLPVADIKALLVGKDCPHMKE 151
             ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   118 EVPHDSLQDKLPVADIKAVVTGKDCPHMKE 147

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=IEA

GO:0006928 "cellular component movement" evidence=IEA

GO:0006911 "phagocytosis, engulfment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|Q92556 ELMO1 "Engulfment and cell motility protein 1" [Homo sapiens (taxid:9606)]

 Score = 415 (151.1 bits), Expect = 3.8e-38, P = 3.8e-38
 Identities = 83/153 (54%), Positives = 115/153 (75%)

Query:     1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
             V  VV+EQ+ RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct:   480 VMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 537

Query:    61 ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
             E I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV  YGD +E 
Sbjct:   538 EKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQ---DKFWYCRLSPNHKVLHYGDLEES 594

Query:   121 SIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
                ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   595 PQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 627

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IGI

GO:0006911 "phagocytosis, engulfment" evidence=IGI

GO:0006928 "cellular component movement" evidence=IGI

GO:0016601 "Rac protein signal transduction" evidence=IGI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006915 "apoptotic process" evidence=NAS

GO:0017124 "SH3 domain binding" evidence=IPI

GO:0005829 "cytosol" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0050690 "regulation of defense response to virus by virus" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:2153044 Elmo1 "engulfment and cell motility 1" [Mus musculus (taxid:10090)]

 Score = 415 (151.1 bits), Expect = 3.8e-38, P = 3.8e-38
 Identities = 83/153 (54%), Positives = 115/153 (75%)

Query:     1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
             V  VV+EQ+ RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct:   480 VMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 537

Query:    61 ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
             E I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV  YGD +E 
Sbjct:   538 EKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQ---DKFWYCRLSPNHKVLHYGDLEES 594

Query:   121 SIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
                ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   595 PQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 627

GO:0005515 "protein binding" evidence=IPI

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0006909 "phagocytosis" evidence=IDA

GO:0006911 "phagocytosis, engulfment" evidence=ISO;ISS

GO:0006915 "apoptotic process" evidence=IEA

GO:0006928 "cellular component movement" evidence=ISO;ISS

GO:0016020 "membrane" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=ISO;ISS

GO:0017124 "SH3 domain binding" evidence=ISO

GO:0030029 "actin filament-based process" evidence=IDA

GO:0030036 "actin cytoskeleton organization" evidence=ISO;ISS

RGD|1308182 Elmo1 "engulfment and cell motility 1" [Rattus norvegicus (taxid:10116)]

 Score = 415 (151.1 bits), Expect = 3.8e-38, P = 3.8e-38
 Identities = 83/153 (54%), Positives = 115/153 (75%)

Query:     1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELK 60
             V  VV+EQ+ RAL+++P+SLD+F++ +  L+Y+EI  + Q ER ++E+++S  +PI+ELK
Sbjct:   480 VMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQS--RPILELK 537

Query:    61 ELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEK 120
             E I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV  YGD +E 
Sbjct:   538 EKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQ---DKFWYCRLSPNHKVLHYGDLEES 594

Query:   121 SIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
                ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct:   595 PQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 627

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006909 "phagocytosis" evidence=IEA;ISO

GO:0006911 "phagocytosis, engulfment" evidence=ISO

GO:0006928 "cellular component movement" evidence=ISO

GO:0016601 "Rac protein signal transduction" evidence=ISO

GO:0017124 "SH3 domain binding" evidence=ISO

GO:0030029 "actin filament-based process" evidence=ISO

GO:0030036 "actin cytoskeleton organization" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q92556	ELMO1_HUMAN	No assigned EC number	0.5454	0.9539	0.1994	yes	N/A
Q8BPU7	ELMO1_MOUSE	No assigned EC number	0.5454	0.9539	0.1994	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	152
cd13359	126	cd13359, PH_ELMO1_CED-12, Engulfment and cell moti	7e-44
cd01248	108	cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfm	1e-06

>gnl|CDD|241513 cd13359, PH_ELMO1_CED-12, Engulfment and cell motility protein 1 pleckstrin homology (PH) domain

 Score =  140 bits (355), Expect = 7e-44
 Identities = 56/84 (66%), Positives = 66/84 (78%), Gaps = 4/84 (4%)

Query: 69  DLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIP-QLDH 127
           +LI+QQRL +LVEGT F KY++R +    DKFWY RLSPNHKV  YGDC+E + P  L+ 
Sbjct: 1   ELIKQQRLNFLVEGTLFPKYNARRRK---DKFWYCRLSPNHKVLHYGDCEESAQPAPLES 57

Query: 128 LPNKLPVADIKALLVGKDCPHMKE 151
           LP KLPVADIKAL+ GKDCPHMKE
Sbjct: 58  LPEKLPVADIKALVTGKDCPHMKE 81

DOCK2 (Dedicator of cytokinesis 2), a hematopoietic cell-specific, atypical GEF, controls lymphocyte migration through Rac activation. A DOCK2-ELMO1 complex s necessary for DOCK2-mediated Rac signaling. DOCK2 contains a SH3 domain at its N-terminus, followed by a lipid binding DHR1 domain, and a Rac-binding DHR2 domain at its C-terminus. ELMO1, a mammalian homolog of C. elegans CED-12, contains the N-terminal RhoG-binding region, the ELMO domain, the PH domain, and the C-terminal sequence with three PxxP motifs. The C-terminal region of ELMO1, including the Pro-rich sequence, binds the SH3-containing region of DOCK2 forming a intermolecular five-helix bundle along with the PH domain of ELMO1. Autoinhibition of ELMO1 and DOCK2 is accomplished by the interactions of the EID and EAD domains and SH3 and DHR2 domains, respectively. The interaction of DOCK2 and ELMO1 mutually relieve their autoinhibition and results in the activation of Rac1. The PH domain of ELMO1 does not bind phosphoinositides due to the absence of key binding residues. It more closely resembles the FERM domain rather than other PH domains. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 126

>gnl|CDD|241279 cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfment and cell motility protein 1 pleckstrin homology domain

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 10/73 (13%)

Query: 79  LVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIK 138
           L +GT   KY    +     K     L P+     +    +KS  +       + ++DIK
Sbjct: 1   LQQGTLLLKYREGSK----PKERTFYLDPDGTQITWESSKKKSEKK------SIDISDIK 50

Query: 139 ALLVGKDCPHMKE 151
            +  GKD    K 
Sbjct: 51  EVRPGKDTKGFKR 63

The C-terminal region of ELMO1, the PH domain and Pro-rich sequences, binds the SH3-containing region of DOCK2 forming a intermolecular five-helix bundle allowing for DOCK mediated Rac1 activation. ELMO1, a mammalian homolog of C. elegans CED-12, contains an N-terminal RhoG-binding region, a ELMO domain, a PH domain, and a C-terminal sequence with three PxxP motifs. Specificaly, PLCs catalyze the cleavage of phosphatidylinositol-4,5-bisphosphate (PIP2) and result in the release of 1,2-diacylglycerol (DAG) and inositol 1,4,5-triphosphate (IP3). These products trigger the activation of protein kinase C (PKC) and the release of Ca2+ from intracellular stores. There are fourteen kinds of mammalian phospholipase C which are are classified into six isotypes (beta, gamma, delta, epsilon, zeta, eta). All PLCs, except for PLCzeta, have a PH domain which is for most part N-terminally located, though lipid binding specificity is not conserved between them. In addition PLC gamma contains a split PH domain within its catalytic domain that is separated by 2 SH2 domains and a single SH3 domain. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG2999|consensus	713		100.0
cd01248	115	PH_PLC Phospholipase C (PLC) pleckstrin homology (	98.62
PF12814	123	Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin	97.15
cd01239	117	PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin hom	81.98

>KOG2999|consensus

Probab=100.00  E-value=2.1e-53  Score=381.03  Aligned_cols=147  Identities=59%  Similarity=0.966  Sum_probs=142.2

Q ss_pred             ChhhhHHHHHHHhccCCCcHHHHHHHhhccChHHHHHHHHHHhhhhhhhhcCCcchHHHhhhhcHHHHHHHHHHHHhHhh
Q psy5800           1 VFSVVREQITRALSSQPASLDKFRANISRLTYSEITNLWQQERTSREEWESHAKPIVELKELITPEIVDLIQQQRLGYLV   80 (152)
Q Consensus         1 V~~vVR~QI~~~L~~~p~t~d~~e~~l~~~~Y~~i~~~~Q~E~~~~e~~~~~~~~v~eLRe~L~~E~~efVk~QRi~~Ll   80 (152)
                      ||+||||||.|||..+|.++|+|+.+|+.|+|.+|+++||.||+.+|+.  +++||.+||++|+||++|+|||||+|+|+
T Consensus       464 VmqVVrEQl~r~L~~kp~sld~fkskl~~lsY~eil~irqsErl~qEd~--~s~pIleLkeKi~PeilELIkqqrLnrL~  541 (713)
T KOG2999|consen  464 VMQVVREQLRRALKRKPQSLDQFKSKLETLSYREILRIRQSERLSQEDF--QSPPILELKEKIQPEILELIKQQRLNRLV  541 (713)
T ss_pred             HHHHHHHHHHHHhccCCccHHHHHHHHHhccHHHHHHHHHHHhhccccc--cCchHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999999999999999999999999999955  45999999999999999999999999999


Q ss_pred             cCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCC--CCCCCCCCccCccceeeeeeCCCCCCcccC
Q psy5800          81 EGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSI--PQLDHLPNKLPVADIKALLVGKDCPHMKEA  152 (152)
Q Consensus        81 qGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~--p~le~L~~KIdls~I~~vvsgk~cph~~~~  152 (152)
                      +||.|+|.+++|   ++++|||||||||||+||||||++++.  |+.|+||+|++|+||++|++|||||||||.
T Consensus       542 eGt~FRKl~~rr---rqdkFWycrLspnhKvLhygd~de~p~~e~~~esl~~klpvaDIkav~tgkdcphmkek  612 (713)
T KOG2999|consen  542 EGTVFRKLSKRR---RQDKFWYCRLSPNHKVLHYGDCDEEPQGEVTQESLQEKLPVADIKAVVTGKDCPHMKEK  612 (713)
T ss_pred             hhhHHHHhhhhh---hhhhheeeeecCCcceeeecCccCCCCCCCchhhhhhhcCHHHHHHHhcCCCCcchhhc
Confidence            999999999999   999999999999999999999999965  999999999999999999999999999984

>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain

Probab=98.62  E-value=3.7e-08  Score=72.34  Aligned_cols=65  Identities=22%  Similarity=0.261  Sum_probs=54.0

Q ss_pred             HhHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCCCCccc
Q psy5800          76 LGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMKE  151 (152)
Q Consensus        76 i~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~cph~~~  151 (152)
                      +..|.+|+.|.|+.. +   ...+.+++||+|+..+|+|++...+       ....|||++|++|-+|+.|++.+.
T Consensus         3 ~~~L~~G~~~~K~~~-~---~~~~~~~f~ld~~~~~l~W~~~~~~-------~~~~l~i~~IkeIR~G~~~k~~~~   67 (115)
T cd01248           3 PEALQRGSVFIKWDD-T---SRERRRLFRLDEKGFFLYWKDEGKK-------EKKVLDISSIKEIRTGKQPKDLKL   67 (115)
T ss_pred             hHHHhCCCEEEEEcC-C---CceeeEEEEEcCCCcEEEEeCCCCc-------cccEEEehhhhhhhCCCCCcchHH
Confidence            467999999999866 3   3455799999999999999986543       355799999999999999998764

Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis

Probab=97.15  E-value=0.0012  Score=49.35  Aligned_cols=75  Identities=17%  Similarity=0.299  Sum_probs=51.6

Q ss_pred             HHHhHhhcCccccccCCCC-ccc-ccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCCCC
Q psy5800          74 QRLGYLVEGTRFTKYSSRG-QVI-ILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPH  148 (152)
Q Consensus        74 QRi~~LlqGawF~k~~~~r-~~~-~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~cph  148 (152)
                      +=|.+|..|+||-|+..+. +.. .....||+.|+|+.++|+|.+-+......-..=...|.+.+|.+|.-|...|-
T Consensus         4 ~ai~~~~~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~   80 (123)
T PF12814_consen    4 QAITQLMIGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPP   80 (123)
T ss_pred             HHHHHhhcccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCc
Confidence            4477899999999985433 110 12236777899999999998876443321222234599999999998877664

During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex

>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain

Probab=81.98  E-value=1.8  Score=32.73  Aligned_cols=37  Identities=22%  Similarity=0.303  Sum_probs=26.8

Q ss_pred             ceEEEEecCCcceEEeecCCCCCCCCCCCCCCc-cCccceeeeeeC
Q psy5800          99 KFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNK-LPVADIKALLVG  143 (152)
Q Consensus        99 k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~K-Idls~I~~vvsg  143 (152)
                      |-.|+||+.+.=.|..-|...+        +-| |+|++|-+|.+.
T Consensus        17 KRhYWrLDsK~Itlf~~e~~sk--------yyKeIPLsEIl~V~~~   54 (117)
T cd01239          17 KKHYWRLDSKAITLYQEESGSR--------YYKEIPLAEILSVSSN   54 (117)
T ss_pred             eeeEEEecCCeEEEEEcCCCCe--------eeEEeehHHheEEecc
Confidence            4569999998877766554433        334 999999999755

Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
2vsz_A	149	Crystal Structure Of The Elmo1 Ph Domain Length = 1		2e-27
3a98_B	203	Crystal Structure Of The Complex Of The Interacting		1e-26

>pdb|2VSZ|A Chain A, Crystal Structure Of The Elmo1 Ph Domain Length = 149

Iteration: 1
 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 74/101 (73%), Gaps = 5/101 (4%)
Query: 53  AKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVF 112
             PI+ELKE I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV 
Sbjct: 4   GSPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQ---DKFWYCRLSPNHKVL 60
Query: 113 QYGDCDEKSIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
            YGD +E    ++ H  L +KLPVADIKA++ GKDCPHMKE
Sbjct: 61  HYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 101

>pdb|3A98|B Chain B, Crystal Structure Of The Complex Of The Interacting Regions Of Dock2 And Elmo1 Length = 203

Iteration: 1
 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 74/101 (73%), Gaps = 5/101 (4%)
Query: 53  AKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVF 112
           + PI+ELKE I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV 
Sbjct: 6   SGPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQ---DKFWYCRLSPNHKVL 62
Query: 113 QYGDCDEKSIPQLDH--LPNKLPVADIKALLVGKDCPHMKE 151
            YGD +E    ++ H  L +KLPVADIKA++ GKDCPH KE
Sbjct: 63  HYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHXKE 103

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
3a98_B	203	Engulfment and cell motility protein 1; protein-pr	3e-30
1mai_A	131	Phospholipase C delta-1; pleckstrin, inositol tris	2e-10

>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A Length = 203

 Score =  107 bits (269), Expect = 3e-30
 Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 5/101 (4%)

Query: 53  AKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVF 112
           + PI+ELKE I PEI++LI+QQRL  LVEGT F K ++R +    DKFWY RLSPNHKV 
Sbjct: 6   SGPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARRR---QDKFWYCRLSPNHKVL 62

Query: 113 QYGDCDEKSI--PQLDHLPNKLPVADIKALLVGKDCPHMKE 151
            YGD +E        D L +KLPVADIKA++ GKDCPHMKE
Sbjct: 63  HYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKE 103

>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 Length = 131

 Score = 54.1 bits (130), Expect = 2e-10
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 8/83 (9%)

Query: 69  DLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHL 128
            L     L  L++G++  K  S        +  + +L  + K        E         
Sbjct: 3   GLQDDPDLQALLKGSQLLKVKSSSWR----RERFYKLQEDCKTIWQ----ESRKVMRSPE 54

Query: 129 PNKLPVADIKALLVGKDCPHMKE 151
                + DI+ + +G     +++
Sbjct: 55  SQLFSIEDIQEVRMGHRTEGLEK 77

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
3a98_B	203	Engulfment and cell motility protein 1; protein-pr	100.0
1mai_A	131	Phospholipase C delta-1; pleckstrin, inositol tris	99.07
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	98.43
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	97.88
2rrf_A	141	Zinc finger FYVE domain-containing protein 21; zfy	96.76
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	93.04

>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A

Probab=100.00  E-value=1.1e-40  Score=268.34  Aligned_cols=97  Identities=63%  Similarity=1.010  Sum_probs=90.4

Q ss_pred             CCcchHHHhhhhcHHHHHHHHHHHHhHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCC--CCCCCCC
Q psy5800          52 HAKPIVELKELITPEIVDLIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSI--PQLDHLP  129 (152)
Q Consensus        52 ~~~~v~eLRe~L~~E~~efVk~QRi~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~--p~le~L~  129 (152)
                      +++||++||++|+||++||||||||+||++|+||++.+++|   .+++|||||||||||+||||||++...  |++|+||
T Consensus         5 ~~~~v~~lre~l~~e~~e~VkeQRi~~L~~G~~F~k~~~~r---~~~k~~f~rLs~n~k~L~y~d~~~~~~~~p~ld~l~   81 (203)
T 3a98_B            5 SSGPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARR---RQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQ   81 (203)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSSCCT---TCCSEEEEEECTTSSEEEEEECCBCSSCBCCBCCSC
T ss_pred             cchhHHHHHHHHhHHHHHHHHHHHHHHHHCCCeEeccCCcc---ccCceEEEEECCCCceEEEccccccccCCCChhhcc
Confidence            45899999999999999999999999999999999998877   778899999999999999999999764  9999999


Q ss_pred             CccCccceeeeeeCCCCCCccc
Q psy5800         130 NKLPVADIKALLVGKDCPHMKE  151 (152)
Q Consensus       130 ~KIdls~I~~vvsgk~cph~~~  151 (152)
                      +||||+||++|++|++|||+++
T Consensus        82 ~kI~ls~Is~V~sg~~~p~~~~  103 (203)
T 3a98_B           82 DKLPVADIKAVVTGKDCPHMKE  103 (203)
T ss_dssp             CEEEGGGEEEEEEGGGSTTC--
T ss_pred             cceeHhhhhHhhcCCCCccccc
Confidence            9999999999999999999976

>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1

Probab=99.07  E-value=7.5e-11  Score=87.38  Aligned_cols=70  Identities=14%  Similarity=0.196  Sum_probs=57.4

Q ss_pred             HHHHhHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCCCCcc
Q psy5800          73 QQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMK  150 (152)
Q Consensus        73 ~QRi~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~cph~~  150 (152)
                      +|+|+.|.+|++|.|+.+++   .+ +.||++|++|++++||+.    .++.....+.+|+|++|++|.+|+.||+++
T Consensus         7 ~q~l~~L~~Gt~l~K~~~~~---~~-k~r~f~l~~~~~~~w~~s----~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~   76 (131)
T 1mai_A            7 DPDLQALLKGSQLLKVKSSS---WR-RERFYKLQEDCKTIWQES----RKVMRSPESQLFSIEDIQEVRMGHRTEGLE   76 (131)
T ss_dssp             CHHHHHHHHCEEEEEESSSS---CE-EEEEEEECTTSSEEEECC----CCTTCCTTTTEEEGGGEEEEEESSCSHHHH
T ss_pred             HHHHHHHHcCCeEEEECCCC---cc-eeEEEEECCCCCEEEeCC----cCCCCCCcCcEEEHhhhHHHHCCCCCHHHH
Confidence            68999999999999996654   33 679999999999999973    122244567889999999999999998754

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=98.43  E-value=1.2e-07  Score=89.58  Aligned_cols=64  Identities=17%  Similarity=0.285  Sum_probs=53.4

Q ss_pred             hHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCCCCccc
Q psy5800          77 GYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMKE  151 (152)
Q Consensus        77 ~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~cph~~~  151 (152)
                      ..|++|++|.|+..++   ...++|++|||||.++|||++-  +  +  |  +++|+|++|++|.+|++|+|+|+
T Consensus        19 ~~L~~Gt~f~K~~~~~---~~~k~~~frLD~d~~~L~W~~~--~--k--e--~~~l~Is~IkeIR~G~~a~~pKd   82 (885)
T 3ohm_B           19 ETLRRGSKFIKWDEET---SSRNLVTLRVDPNGFFLYWTGP--N--M--E--VDTLDISSIRDTRTGRYARLPKD   82 (885)
T ss_dssp             HHHHHCEEEEEECTTC---CSCCEEEEEECTTSCEEEEECG--G--G--C--EEEEEGGGEEEEEETTTSCCCCS
T ss_pred             HHHhCCCeEEEECCCC---CCcEEEEEEECCCCCEEEEeCC--C--C--C--CceEeeehhhhhhcCcCCCCCcc
Confidence            3688999999997765   4567899999999999999982  1  1  1  35799999999999999999764

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=97.88  E-value=7.2e-06  Score=76.52  Aligned_cols=61  Identities=20%  Similarity=0.302  Sum_probs=51.0

Q ss_pred             hHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCCCC
Q psy5800          77 GYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPH  148 (152)
Q Consensus        77 ~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~cph  148 (152)
                      ..|.+|+.|.|...++   ...+.||+||+|+.++|+|++..    +  +  ..+|+|++|++|.+|+.|++
T Consensus        15 ~~L~~Gt~~~K~~~~~---~~~k~~~frLd~d~~~l~W~~~~----k--~--~~~l~I~~IkeIR~G~~s~~   75 (799)
T 2zkm_X           15 AYLSQGERFIKWDDET---TVASPVILRVDPKGYYLYWTYQS----K--E--MEFLDITSIRDTRFGKFAKM   75 (799)
T ss_dssp             HHHHHCEEEEEECTTT---CCEEEEEEEECTTSCEEEEEETT----S--C--EEEEEGGGEEEEEEGGGSCC
T ss_pred             HHHhCCCEEEEEcCCC---cceeEEEEEEcCCCCEEEEccCC----C--c--CceEeeeeeHHhhcCCCCCC
Confidence            4688999999996655   44478999999999999999742    1  1  45899999999999999986

>2rrf_A Zinc finger FYVE domain-containing protein 21; zfyve21, PH, unknown function; NMR {Homo sapiens}

Probab=96.76  E-value=0.00098  Score=50.47  Aligned_cols=57  Identities=19%  Similarity=0.270  Sum_probs=39.8

Q ss_pred             HHHHhHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeee
Q psy5800          73 QQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLV  142 (152)
Q Consensus        73 ~QRi~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvs  142 (152)
                      .-+|..|++||-|-.-.+..   .+.--.-||||+|||||-. |-+.         ...|+|+-|++|-.
T Consensus        12 DKqLKvLl~GatF~Vs~~~s---ek~e~~vCrLS~nhR~L~l-dgds---------h~eIels~I~~vqi   68 (141)
T 2rrf_A           12 DKQLKVLLSGATFLVTFGNS---EKPETMTCRLSNNQRYLFL-DGDS---------HYEIEIVHISTVQI   68 (141)
T ss_dssp             HHHHHHHHHCEEEEECCSSC---CSCEEEEEEECTTSSEEEE-ESSS---------EEEEETTTCCCEEC
T ss_pred             HHHHHHHhCCceEEEeccCC---CCCceEEEEecCCeeEEEE-cCCC---------CCcEEeeeeeEEEE
Confidence            35688999999998754333   2333578999999999998 3322         25677777776644

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=93.04  E-value=0.077  Score=49.80  Aligned_cols=59  Identities=15%  Similarity=0.189  Sum_probs=45.8

Q ss_pred             HhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCC
Q psy5800          78 YLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDC  146 (152)
Q Consensus        78 ~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~c  146 (152)
                      .|.+|++|.|.....   ...+..+.||+|+.-+|.|..-..   .+    ...|+|++|++|-+|+..
T Consensus        21 ~L~~G~~~~K~~~~s---~~~~~~~f~lD~d~~~L~W~~~~k---~~----~~~l~I~~I~eVR~G~~t   79 (816)
T 3qr0_A           21 QLIKGDKFLKWEEGS---SGFIEILLRVDPKGYFLYWKIEGK---ED----TQLLDLAYVRDIRCAKYA   79 (816)
T ss_dssp             HHHHCEEEEEECTTC---CCCEEEEEEECTTSCEEEECCTTC---SS----CEEEEGGGEEEEEEGGGS
T ss_pred             HHhCCCeEEEECCCC---CcceeEEEEEcCCCCEEEEeCCCC---Cc----CcEEEeeeeeeeecCCcC
Confidence            578899999997655   333578999999999999964211   11    256999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1maia_	119	b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus	4e-12
d2zkmx3	131	b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human	1e-04

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 119

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.3 bits (138), Expect = 4e-12
 Identities = 11/81 (13%), Positives = 25/81 (30%), Gaps = 8/81 (9%)

Query: 70  LIQQQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLP 129
           L     L  L++G++  K  S        +  + +L  + K                   
Sbjct: 2   LQDDPDLQALLKGSQLLKVKSSSW----RRERFYKLQEDCKTIWQESRK----VMRSPES 53

Query: 130 NKLPVADIKALLVGKDCPHMK 150
               + DI+ + +G     ++
Sbjct: 54  QLFSIEDIQEVRMGHRTEGLE 74

>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 131

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 1e-04
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 11/73 (15%)

Query: 78  YLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADI 137
           YL +G RF K+     V        +R+ P      +    ++           L +  I
Sbjct: 6   YLSQGERFIKWDDETTV---ASPVILRVDPKGYYLYWTYQSKEM--------EFLDITSI 54

Query: 138 KALLVGKDCPHMK 150
           +    GK     K
Sbjct: 55  RDTRFGKFAKMPK 67

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	98.63
d2zkmx3	131	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	98.27

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.63  E-value=1.4e-08  Score=71.14  Aligned_cols=69  Identities=14%  Similarity=0.201  Sum_probs=54.4

Q ss_pred             HHHHhHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCCCCc
Q psy5800          73 QQRLGYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHM  149 (152)
Q Consensus        73 ~QRi~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~cph~  149 (152)
                      +|.|..|.+|+.|.|.+++.   . .+.||++|++|.+.|||.+......    .-...||+++|.+|..|.+||..
T Consensus         5 d~~l~~l~~G~~l~K~~~~~---~-~k~R~f~L~~d~~~i~~~~~~~~~~----~~~~~i~i~~I~~V~~G~~s~~~   73 (119)
T d1maia_           5 DPDLQALLKGSQLLKVKSSS---W-RRERFYKLQEDCKTIWQESRKVMRS----PESQLFSIEDIQEVRMGHRTEGL   73 (119)
T ss_dssp             CHHHHHHHHCEEEEEESSSS---C-EEEEEEEECTTSSEEEECCCCTTCC----TTTTEEEGGGEEEEEESSCSHHH
T ss_pred             HHHHHHHHcCCeEEEeCCCC---C-CEEEEEEEcCCCCEEEEeCCCCCCC----ccceEEEHHHceEEEcCCCCchh
Confidence            58899999999999986433   1 2357889999999999976544433    22567999999999999998754

>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.6e-07  Score=67.07  Aligned_cols=63  Identities=21%  Similarity=0.298  Sum_probs=51.2

Q ss_pred             hHhhcCccccccCCCCcccccCceEEEEecCCcceEEeecCCCCCCCCCCCCCCccCccceeeeeeCCCCCCcc
Q psy5800          77 GYLVEGTRFTKYSSRGQVIILDKFWYVRLSPNHKVFQYGDCDEKSIPQLDHLPNKLPVADIKALLVGKDCPHMK  150 (152)
Q Consensus        77 ~~LlqGawF~k~~~~r~~~~~~k~~f~rLSpN~K~LhygD~~e~~~p~le~L~~KIdls~I~~vvsgk~cph~~  150 (152)
                      ..|.+|+-|-|....+   ...+.+++||+|+..+|+|++-...        ...||+++|++|.+|+.+++.+
T Consensus         5 ~~L~~G~~f~K~~~~~---~~~~~~~frlD~~g~~L~W~~~~k~--------~~~l~i~~I~evR~G~~~~~~k   67 (131)
T d2zkmx3           5 AYLSQGERFIKWDDET---TVASPVILRVDPKGYYLYWTYQSKE--------MEFLDITSIRDTRFGKFAKMPK   67 (131)
T ss_dssp             HHHHHCEEEEEECTTT---CCEEEEEEEECTTSCEEEEEETTSC--------EEEEEGGGEEEEEEGGGSCCCC
T ss_pred             hHHhCCCeEEEEcCCC---CccceEEEEECCCCCEEEEECCCCc--------eeEEEecceeeEEeccccCCcc
Confidence            3689999999996555   4455799999999999999984322        3479999999999999887765