Psyllid ID: psy5801

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
Protein Sequence
MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Secondary Structure (PSIPRED)
cccccEEEEccccccEEEEEEEccccEEEEcccccHHHHccccccEEEEEEEEEcccccEEEEEcccccccEEEEEcccccEEEEEEEEccccccccEEEEEEEcccEEEEEcccccEEEEEcccccccEEEEEEccccccEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHcccccccEEEEEEccHEEEcccccccEEEEccEcHHHccEEEEcccccEEEEEEccccccEEEEEEccccEEEEEHEEEEEccccccccEEEEEEcccEEEccccccEEEEEEEEcHHHEEEEEEcccccEEEEEEEcccccEEEEEEcccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MFSAFvhktnkfnrcadraLLVTDFAVYKLDSGAKFKAMkrgmslqemtglsvspgsdqLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKtnkfnrcadraLLVTDFAVYKLDSGAKFKAMkrgmslqemtglsvspgsdqLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Flexible Loop (DISEMBL)
mfsafvhktnkfnrcadralLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKtnkfnrcadrALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Low Complexity Region (SEG)
MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Disordered region (IsUnstruct)
****FVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKA*******************DQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKA*******************DQLVVIHNNKGNDLVFTIISSEDRVGELVGA******
Disordered Region (DISOPRED)
MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAK***********EMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Disordered Region (DISEMBL)
MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Disordered Region (DISPRO)
MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	176	2.2.26 [Sep-21-2011]
Q23978	1011	Myosin-IA OS=Drosophila m	yes	N/A	0.698	0.121	0.408	6e-21
Q5SUA5	1024	Unconventional myosin-Ig	yes	N/A	0.517	0.088	0.468	1e-16
Q5SYD0	1006	Unconventional myosin-Id	no	N/A	0.528	0.092	0.448	2e-16
O94832	1006	Unconventional myosin-Id	yes	N/A	0.528	0.092	0.448	2e-16
Q63357	1006	Unconventional myosin-Id	yes	N/A	0.528	0.092	0.448	2e-16
Q17R14	1006	Unconventional myosin-Id	no	N/A	0.528	0.092	0.448	3e-16
B0I1T2	1018	Unconventional myosin-Ig	no	N/A	0.517	0.089	0.468	3e-16
Q5ZMC2	1007	Unconventional myosin-Ig	no	N/A	0.505	0.088	0.425	4e-13

>sp|Q23978|MY31D_DROME Myosin-IA OS=Drosophila melanogaster GN=Myo31DF PE=2 SV=1

 Score =  100 bits (248), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 14/137 (10%)

Query: 46  QEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVT 105
           QE +G     GS + +  H   G            +V+FS+FV K N FN+ A+RA +V+
Sbjct: 827 QENSGYEAYNGSIKNIRNHPADGETF--------QQVLFSSFVKKFNHFNKQANRAFIVS 878

Query: 106 DFAVYKLDS-GAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISS---- 160
           D  ++KLD    KFK MKR + ++E+T +SVSPG DQL+V H++K  DLVF++ S     
Sbjct: 879 DSTIHKLDGIKNKFKDMKRTIKIRELTSISVSPGRDQLIVFHSSKNKDLVFSLESEYTPL 938

Query: 161 -EDRVGELVGALASRYY 176
            EDR+GE+VG +  +Y+
Sbjct: 939 KEDRIGEVVGIVCKKYH 955

Involved in directing the movement of organelles along actin filaments.
Drosophila melanogaster (taxid: 7227)

>sp|Q5SUA5|MYO1G_MOUSE Unconventional myosin-Ig OS=Mus musculus GN=Myo1g PE=2 SV=1

 Score = 86.3 bits (212), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 5/96 (5%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FS+ V K N+F +  DRALL+TD  +YKL+ G +++ M R + L+ +TGLSV+ G DQ
Sbjct: 875 VLFSSHVRKVNRFRKSRDRALLLTDRYLYKLEPGRQYRVM-RAVPLEAVTGLSVTSGRDQ 933

Query: 142 LVVIHNNKGNDLVFTIISSE----DRVGELVGALAS 173
           LVV+H    +DLV  +  S+    +R+GELVG LA+
Sbjct: 934 LVVLHAQGYDDLVVCLHRSQPPLDNRIGELVGMLAA 969

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Mus musculus (taxid: 10090)

>sp|Q5SYD0|MYO1D_MOUSE Unconventional myosin-Id OS=Mus musculus GN=Myo1d PE=1 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915

Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
           LVV H     DL+  + S     E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Mus musculus (taxid: 10090)

>sp|O94832|MYO1D_HUMAN Unconventional myosin-Id OS=Homo sapiens GN=MYO1D PE=1 SV=2

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915

Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
           LVV H     DL+  + S     E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Homo sapiens (taxid: 9606)

>sp|Q63357|MYO1D_RAT Unconventional myosin-Id OS=Rattus norvegicus GN=Myo1d PE=1 SV=3

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915

Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
           LVV H     DL+  + S     E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Rattus norvegicus (taxid: 10116)

>sp|Q17R14|MYO1D_BOVIN Unconventional myosin-Id OS=Bos taurus GN=MYO1D PE=2 SV=1

 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 5/98 (5%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct: 857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMK-TIPLYNLTGLSVSNGKDQ 915

Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
           LVV H     DL+  + S     E R+GELVG L + +
Sbjct: 916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Bos taurus (taxid: 9913)

>sp|B0I1T2|MYO1G_HUMAN Unconventional myosin-Ig OS=Homo sapiens GN=MYO1G PE=1 SV=2

 Score = 84.7 bits (208), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 5/96 (5%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FS+ V K N+F++  +RALL+TD  +YKLD   +++ M R + L+ +TGLSV+ G DQ
Sbjct: 869 VLFSSHVRKVNRFHKIRNRALLLTDQHLYKLDPDRQYRVM-RAVPLEAVTGLSVTSGGDQ 927

Query: 142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALAS 173
           LVV+H    +DLV  +  S    ++RVGELVG LA+
Sbjct: 928 LVVLHARGQDDLVVCLHRSRPPLDNRVGELVGVLAA 963

Precursor of the minor histocompatibility antigen HA-2. More generally, minor histocompatibility antigens (mHags) refer to immunogenic peptide which, when complexed with MHC, can generate an immune response after recognition by specific T-cells. The peptides are derived from polymorphic intracellular proteins, which are cleaved by normal pathways of antigen processing. The binding of these peptides to MHC class I or class II molecules and their expression on the cell surface can stimulate T-cell responses and thereby trigger graft rejection or graft-versus-host disease (GVHD) after hematopoietic stem cell transplantation from HLA-identical sibling donor. GVHD is a frequent complication after bone marrow transplantation (BMT), due to mismatch of minor histocompatibility antigen in HLA-matched sibling marrow transplants. HA-2 is restricted to MHC class I HLA-A*0201.

Homo sapiens (taxid: 9606)

>sp|Q5ZMC2|MYO1G_CHICK Unconventional myosin-Ig OS=Gallus gallus GN=MYO1G PE=2 SV=1

 Score = 73.9 bits (180), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 5/94 (5%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FS+ V K N+FN+  DRA+L+TD  +YKL+   +++ M R + L  +TGLSV+    Q
Sbjct: 858 VLFSSHVRKINRFNKSRDRAILITDQHLYKLEPRKQYRVM-RELPLSMVTGLSVTSCRAQ 916

Query: 142 LVVIHNNKGNDLVFTIISSE----DRVGELVGAL 171
           LVV H    +DL   +  ++    +RVGELVG L
Sbjct: 917 LVVFHTQNHDDLAVCLHKTQPRGDERVGELVGVL 950

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
328710985	1014	PREDICTED: myosin-IA [Acyrthosiphon pisu	0.545	0.094	0.594	5e-30
307192537	1004	Myosin-IA [Harpegnathos saltator]	0.534	0.093	0.621	8e-30
322801520	975	hypothetical protein SINV_13577 [Solenop	0.534	0.096	0.631	1e-29
332019366	964	Myosin-IA [Acromyrmex echinatior]	0.534	0.097	0.621	1e-28
307174013	1017	Myosin-IA [Camponotus floridanus]	0.534	0.092	0.6	1e-27
66509418	1017	PREDICTED: myosin-IA [Apis mellifera]	0.528	0.091	0.595	1e-27
380025669	1017	PREDICTED: LOW QUALITY PROTEIN: myosin-I	0.528	0.091	0.585	2e-27
350417341	1015	PREDICTED: myosin-IA-like [Bombus impati	0.528	0.091	0.606	2e-27
340714335	1015	PREDICTED: myosin-IA-like [Bombus terres	0.528	0.091	0.606	2e-27
289191323	1019	myosin 1A [Nasonia vitripennis]	0.534	0.092	0.578	2e-26

>gi|328710985|ref|XP_001942634.2| PREDICTED: myosin-IA [Acyrthosiphon pisum]

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/101 (59%), Positives = 86/101 (85%), Gaps = 5/101 (4%)

Query: 80  DRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGS 139
           ++V+FS+F+HKTN++N+CADRA+L+TD+A+YKLD    FK MK+GM +QE+TG+SVSPG 
Sbjct: 852 NQVLFSSFIHKTNRYNKCADRAILITDWAIYKLDI-TNFKPMKKGMPIQEVTGMSVSPGQ 910

Query: 140 DQLVVIHNNKGNDLVFTIISS----EDRVGELVGALASRYY 176
           DQLVVIH+N+GNDLV T+  +    EDR+GEL+G +++RY+
Sbjct: 911 DQLVVIHSNRGNDLVVTLKPTADINEDRIGELLGVISTRYF 951

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192537|gb|EFN75725.1| Myosin-IA [Harpegnathos saltator]

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 59/95 (62%), Positives = 80/95 (84%), Gaps = 1/95 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           ++FSAF+ KTN+FN+ ADR L+VT+ AVYKLD G KFK+M++GM + E+TGLSVSPG DQ
Sbjct: 840 ILFSAFIKKTNRFNKPADRVLVVTEHAVYKLD-GVKFKSMRKGMPIAEITGLSVSPGKDQ 898

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY 176
           L+ IH+N+GND + +I + +DRVGELVG L++RYY
Sbjct: 899 LITIHSNRGNDFILSITAKDDRVGELVGVLSNRYY 933

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322801520|gb|EFZ22181.1| hypothetical protein SINV_13577 [Solenopsis invicta]

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/95 (63%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FSAF+ KTN+FN+ ADR L+VT+  VYKLD G KFK MK+GM + E+TGLSVSPG DQ
Sbjct: 824 VLFSAFIRKTNRFNKSADRVLVVTEHTVYKLD-GVKFKNMKKGMPIAEITGLSVSPGRDQ 882

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY 176
           L+ IH+N+GND + +II+ +DR+GELVG L++RYY
Sbjct: 883 LITIHSNRGNDFILSIIAKDDRIGELVGVLSNRYY 917

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019366|gb|EGI59867.1| Myosin-IA [Acromyrmex echinatior]

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/95 (62%), Positives = 79/95 (83%), Gaps = 1/95 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FSAF+ KTN++N+ ADR L+VT+  VYKLD G KFK M++GM + E+TGLSVSPG DQ
Sbjct: 806 VLFSAFIRKTNRYNKPADRVLVVTEHIVYKLD-GVKFKNMRKGMPIAEITGLSVSPGKDQ 864

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY 176
           L+ IH+N+GND + +II+ +DRVGELVG L++RYY
Sbjct: 865 LITIHSNRGNDFILSIIAKDDRVGELVGILSNRYY 899

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307174013|gb|EFN64723.1| Myosin-IA [Camponotus floridanus]

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/95 (60%), Positives = 77/95 (81%), Gaps = 1/95 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FSAF+ KTN+FN+ ADR L+VT+ AVYKLD   KFK M++GM + E+TGLSVSPG DQ
Sbjct: 853 VLFSAFIRKTNRFNKQADRVLVVTEHAVYKLDD-VKFKNMRKGMPIAEITGLSVSPGKDQ 911

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY 176
            + IH+N+GND + +I + +DR+GELVG L++RYY
Sbjct: 912 FIAIHSNRGNDFILSITAKDDRIGELVGILSNRYY 946

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66509418|ref|XP_624678.1| PREDICTED: myosin-IA [Apis mellifera]

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/94 (59%), Positives = 80/94 (85%), Gaps = 1/94 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FSAF+ KTN+FN+  DR L+VT+ A+YKL++ +KFK MK+GM + E+TGLSVSPG DQ
Sbjct: 853 VLFSAFIKKTNRFNKSKDRVLVVTEHAIYKLEN-SKFKNMKKGMPITEITGLSVSPGKDQ 911

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
           L+VIH+N+GND + +II+ +DR+GELVG L+++Y
Sbjct: 912 LIVIHSNRGNDFIMSIIAKDDRIGELVGILSNKY 945

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380025669|ref|XP_003696591.1| PREDICTED: LOW QUALITY PROTEIN: myosin-IA-like [Apis florea]

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/94 (58%), Positives = 80/94 (85%), Gaps = 1/94 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FSAF+ KTN+FN+  DR L+VT+ A+YKL++ +KFK MK+GM + E+TGLSVSPG DQ
Sbjct: 853 VLFSAFIKKTNRFNKSKDRVLVVTEHAIYKLEN-SKFKNMKKGMPITEITGLSVSPGKDQ 911

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
           L++IH+N+GND + +II+ +DR+GELVG L+++Y
Sbjct: 912 LIIIHSNRGNDFIMSIIAKDDRIGELVGILSNKY 945

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417341|ref|XP_003491375.1| PREDICTED: myosin-IA-like [Bombus impatiens]

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/94 (60%), Positives = 79/94 (84%), Gaps = 1/94 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FSAF+ KTN+FN+  DR L+VT+ A+YKL+S +KFK MK+GM + E+TGLSVSPG DQ
Sbjct: 853 VLFSAFIRKTNRFNKPKDRVLVVTEHAIYKLES-SKFKNMKKGMPITEITGLSVSPGKDQ 911

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
           L+ IH+N+GND + +II+ +DRVGELVG L+++Y
Sbjct: 912 LITIHSNRGNDFIMSIIAKDDRVGELVGILSNKY 945

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714335|ref|XP_003395685.1| PREDICTED: myosin-IA-like [Bombus terrestris]

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/94 (60%), Positives = 79/94 (84%), Gaps = 1/94 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           V+FSAF+ KTN+FN+  DR L+VT+ A+YKL+S +KFK MK+GM + E+TGLSVSPG DQ
Sbjct: 853 VLFSAFIRKTNRFNKPKDRVLVVTEHAIYKLES-SKFKNMKKGMPITEITGLSVSPGKDQ 911

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
           L+ IH+N+GND + +II+ +DRVGELVG L+++Y
Sbjct: 912 LITIHSNRGNDFIMSIIAKDDRVGELVGILSNKY 945

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289191323|ref|NP_001166048.1| myosin 1A [Nasonia vitripennis]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 81/95 (85%), Gaps = 1/95 (1%)

Query: 82  VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
           ++FSAF+ KTNKFN+ ADR ++VT+ A+YKL+S +KFK MK+ M++ E+TGLSVSPG DQ
Sbjct: 855 ILFSAFIKKTNKFNKQADRVMVVTEQALYKLES-SKFKNMKKVMNIAEITGLSVSPGKDQ 913

Query: 142 LVVIHNNKGNDLVFTIISSEDRVGELVGALASRYY 176
           L++IH+N GND + +I++++D+VGELVG L++ YY
Sbjct: 914 LIIIHSNHGNDFIASIVTADDKVGELVGILSNAYY 948

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	176
FB|FBgn0086347	1011	Myo31DF "Myosin 31DF" [Drosoph	0.545	0.094	0.480	2.7e-19
UNIPROTKB|J9NYE5	279	LOC100683071 "Uncharacterized	0.517	0.326	0.489	3.2e-17
UNIPROTKB|E1C459	976	MYO1D "Uncharacterized protein	0.585	0.105	0.423	1.4e-15
UNIPROTKB|F1MFG9	1019	MYO1G "Uncharacterized protein	0.517	0.089	0.479	1.5e-15
UNIPROTKB|K7EIG7	918	MYO1D "Unconventional myosin-I	0.528	0.101	0.448	2.1e-15
UNIPROTKB|F1RKW9	954	MYO1D "Uncharacterized protein	0.528	0.097	0.448	2.2e-15
UNIPROTKB|J3QRN6	961	MYO1D "Unconventional myosin-I	0.528	0.096	0.448	2.2e-15
UNIPROTKB|F1MJ56	1006	MYO1D "Unconventional myosin-I	0.528	0.092	0.448	2.4e-15
UNIPROTKB|Q17R14	1006	MYO1D "Unconventional myosin-I	0.528	0.092	0.448	2.4e-15
UNIPROTKB|F1PRN2	1006	MYO1D "Uncharacterized protein	0.528	0.092	0.448	2.4e-15

FB|FBgn0086347 Myo31DF "Myosin 31DF" [Drosophila melanogaster (taxid:7227)]

 Score = 243 (90.6 bits), Expect = 2.7e-19, P = 2.7e-19
 Identities = 49/102 (48%), Positives = 73/102 (71%)

Query:    81 RVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDS-GAKFKAMKRGMSLQEMTGLSVSPGS 139
             +V+FS+FV K N FN+ A+RA +V+D  ++KLD    KFK MKR + ++E+T +SVSPG 
Sbjct:   854 QVLFSSFVKKFNHFNKQANRAFIVSDSTIHKLDGIKNKFKDMKRTIKIRELTSISVSPGR 913

Query:   140 DQLVVIHNNKGNDLVFTIISS-----EDRVGELVGALASRYY 176
             DQL+V H++K  DLVF++ S      EDR+GE+VG +  +Y+
Sbjct:   914 DQLIVFHSSKNKDLVFSLESEYTPLKEDRIGEVVGIVCKKYH 955

GO:0003779 "actin binding" evidence=NAS

GO:0016459 "myosin complex" evidence=IEA;ISS

GO:0042623 "ATPase activity, coupled" evidence=ISS

GO:0005737 "cytoplasm" evidence=NAS

GO:0003774 "motor activity" evidence=IEA;NAS

GO:0007498 "mesoderm development" evidence=IEP

GO:0007368 "determination of left/right symmetry" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0048803 "imaginal disc-derived male genitalia morphogenesis" evidence=IMP

GO:0071907 "determination of digestive tract left/right asymmetry" evidence=IMP

GO:0005938 "cell cortex" evidence=IDA

UNIPROTKB|J9NYE5 LOC100683071 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS+ V K N+F++  DRALL+TD  +YKLD G +++ M R + L+ +TGLSV+ G DQ
Sbjct:   130 VLFSSHVRKVNRFHKSRDRALLLTDRHLYKLDPGRQYRVM-RAVPLEAVTGLSVTSGRDQ 188

Query:   142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALAS 173
             LVV+H    +DLV  +  S    ++RVGELVG LA+
Sbjct:   189 LVVLHARGQDDLVVCLHRSRPPLDNRVGELVGVLAA 224

GO:0016459 "myosin complex" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|E1C459 MYO1D "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 208 (78.3 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 47/111 (42%), Positives = 67/111 (60%)

Query:    72 VFTIISSEDR---VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQ 128
             V T +  +D+   V+FS  V K N+F++  DRA+ +TD  +YK+D   ++K MK  + L 
Sbjct:   846 VATELKRKDKYMNVLFSCHVRKVNRFSKVEDRAIFITDRHLYKMDPMKQYKVMKT-IPLY 904

Query:   129 EMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSE----DRVGELVGALASRY 175
              + GLSVS G DQLVV H     DL+  + S E    +R+GELVG LAS +
Sbjct:   905 NLVGLSVSNGKDQLVVFHTKDNKDLIVCLFSKEPSNDNRIGELVGVLASHF 955

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0010923 "negative regulation of phosphatase activity" evidence=IEA

UNIPROTKB|F1MFG9 MYO1G "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 208 (78.3 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 46/96 (47%), Positives = 66/96 (68%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS+ V K N+FN+  DRALL+TD  +YKL+ G +++ M R + L  +TGLSV+ G DQ
Sbjct:   870 VLFSSHVRKVNRFNKSRDRALLLTDRHLYKLEPGRQYRVM-RAVPLDAVTGLSVTSGRDQ 928

Query:   142 LVVIHNNKGNDLVFTIISSE----DRVGELVGALAS 173
             LVV+H    +DLV  +  S+    +R+GELVG LA+
Sbjct:   929 LVVLHARGYDDLVVCLHRSQPPLDNRIGELVGVLAA 964

GO:0005886 "plasma membrane" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|K7EIG7 MYO1D "Unconventional myosin-Id" [Homo sapiens (taxid:9606)]

 Score = 206 (77.6 bits), Expect = 2.1e-15, P = 2.1e-15
 Identities = 44/98 (44%), Positives = 60/98 (61%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct:   769 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMKT-IPLYNLTGLSVSNGKDQ 827

Query:   142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
             LVV H     DL+  + S     E R+GELVG L + +
Sbjct:   828 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 865

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1RKW9 MYO1D "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 206 (77.6 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 44/98 (44%), Positives = 60/98 (61%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct:   857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMKT-IPLYNLTGLSVSNGKDQ 915

Query:   142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
             LVV H     DL+  + S     E R+GELVG L + +
Sbjct:   916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

GO:0010923 "negative regulation of phosphatase activity" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|J3QRN6 MYO1D "Unconventional myosin-Id" [Homo sapiens (taxid:9606)]

 Score = 206 (77.6 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 44/98 (44%), Positives = 60/98 (61%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct:   857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMKT-IPLYNLTGLSVSNGKDQ 915

Query:   142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
             LVV H     DL+  + S     E R+GELVG L + +
Sbjct:   916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1MJ56 MYO1D "Unconventional myosin-Id" [Bos taurus (taxid:9913)]

 Score = 206 (77.6 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 44/98 (44%), Positives = 60/98 (61%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct:   857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMKT-IPLYNLTGLSVSNGKDQ 915

Query:   142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
             LVV H     DL+  + S     E R+GELVG L + +
Sbjct:   916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

GO:0010923 "negative regulation of phosphatase activity" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|Q17R14 MYO1D "Unconventional myosin-Id" [Bos taurus (taxid:9913)]

 Score = 206 (77.6 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 44/98 (44%), Positives = 60/98 (61%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct:   857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMKT-IPLYNLTGLSVSNGKDQ 915

Query:   142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
             LVV H     DL+  + S     E R+GELVG L + +
Sbjct:   916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

GO:0010923 "negative regulation of phosphatase activity" evidence=ISS

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|F1PRN2 MYO1D "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 206 (77.6 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 44/98 (44%), Positives = 60/98 (61%)

Query:    82 VMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ 141
             V+FS  V K N+F++  DRA+ VTD  +YK+D   ++K MK  + L  +TGLSVS G DQ
Sbjct:   857 VLFSCHVRKVNRFSKVEDRAIFVTDRHLYKMDPTKQYKVMKT-IPLYNLTGLSVSNGKDQ 915

Query:   142 LVVIHNNKGNDLVFTIISS----EDRVGELVGALASRY 175
             LVV H     DL+  + S     E R+GELVG L + +
Sbjct:   916 LVVFHTKDNKDLIVCLFSKQPTHESRIGELVGVLVNHF 953

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	176
pfam06017	199	pfam06017, Myosin_TH1, Myosin tail	4e-22
pfam06017	199	pfam06017, Myosin_TH1, Myosin tail	2e-16

>gnl|CDD|218855 pfam06017, Myosin_TH1, Myosin tail

 Score = 88.1 bits (219), Expect = 4e-22
 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 64  HNNKGNDLVFTIISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLD----SGAKFK 119
            N K    V +   +E +V+F+  V+K N+  + + R LL+TD A+Y +        K  
Sbjct: 33  ENPKLQKAVGSEEGNE-KVLFADKVNKVNRSGKPSKRDLLLTDKALYLVGREKVKDQKTY 91

Query: 120 AMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRY 175
            +KR + L E+T +S+SP  D L VIH +   DLV       D   ELV  L   Y
Sbjct: 92  VLKRRIPLSEITSVSLSPLQDDLFVIHVSGKGDLVLES----DFKTELVTVLCKHY 143

Length = 199

>gnl|CDD|218855 pfam06017, Myosin_TH1, Myosin tail

 Score = 72.7 bits (179), Expect = 2e-16
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 2   FSAFVHKTNKFNRCADRALLVTDFAVYKLD----SGAKFKAMKRGMSLQEMTGLSVSPGS 57
           F+  V+K N+  + + R LL+TD A+Y +        K   +KR + L E+T +S+SP  
Sbjct: 52  FADKVNKVNRSGKPSKRDLLLTDKALYLVGREKVKDQKTYVLKRRIPLSEITSVSLSPLQ 111

Query: 58  DQLVVIHNNKGNDLVF 73
           D L VIH +   DLV 
Sbjct: 112 DDLFVIHVSGKGDLVL 127

Length = 199

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	176
PF06017	199	Myosin_TH1: Myosin tail; InterPro: IPR010926 These	99.93
PF06017	199	Myosin_TH1: Myosin tail; InterPro: IPR010926 These	99.88
KOG0164|consensus	1001		99.78
KOG0164|consensus	1001		99.65
KOG0162|consensus	1106		98.97
KOG0162|consensus	1106		98.36
PF14593	104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	96.8
PF12456	115	hSac2: Inositol phosphatase ; InterPro: IPR022158	96.73
PF14593	104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	96.37
PF12456	115	hSac2: Inositol phosphatase ; InterPro: IPR022158	95.94
cd01262	89	PH_PDK1 3-Phosphoinositide dependent protein kinas	95.33
PF14470	96	bPH_3: Bacterial PH domain	94.79
cd01262	89	PH_PDK1 3-Phosphoinositide dependent protein kinas	93.15
PF14470	96	bPH_3: Bacterial PH domain	92.11
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	92.09
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	91.09
cd00900	99	PH-like Pleckstrin homology-like domain. Pleckstri	87.39
PF00640	140	PID: Phosphotyrosine interaction domain (PTB/PID)	86.74
cd01218	104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	84.28
cd01260	96	PH_CNK Connector enhancer of KSR (Kinase suppresso	83.83
smart00233	102	PH Pleckstrin homology domain. Domain commonly fou	83.66
cd01244	98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	82.31
PF06713	74	bPH_4: Bacterial PH domain; InterPro: IPR009589 Th	81.81
PF00169	104	PH: PH domain; InterPro: IPR001849 The pleckstrin	80.47

>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT)

Probab=99.93  E-value=2e-25  Score=180.08  Aligned_cols=93  Identities=43%  Similarity=0.604  Sum_probs=85.9

Q ss_pred             CceeEEEEEEEEEecCCceeeeEEEEecceEEEec-----CCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcE
Q psy5801          79 EDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLD-----SGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDL  153 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~K~~~R~llvTd~~ly~ld-----~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~  153 (176)
                      +++++||+.|.||||++|.++|+|+||+.++|+++     +.+.+++ |++|||++|+|||+|+++|+|||||+|+++|+
T Consensus        47 ~e~vlFs~~v~K~nr~~K~~~R~livT~~~iY~l~~~~~~~~~~~~~-kr~i~l~~I~~IsvS~~~D~~~vihv~~~~D~  125 (199)
T PF06017_consen   47 DEKVLFSDRVQKYNRRNKPQPRILIVTDKAIYLLDQRKVKDPKKYKL-KRRIPLSDITGISVSPLSDNFFVIHVPGEGDL  125 (199)
T ss_pred             CcceEEEEEEEEecCCCCccceEEEEeCCeEEEEEEeecCCceeeEE-EeccCcccccEEEEccCCCCEEEEEECCCCCE
Confidence            77999999999999999999999999999999996     3333555 88899999999999999999999999999999


Q ss_pred             EEEeccCCCchhhhHHHHHhhcC
Q psy5801         154 VFTIISSEDRVGELVGALASRYY  176 (176)
Q Consensus       154 ~~~~~~~~~r~~E~v~~l~~~~~  176 (176)
                      ++++    ++.+|+++.|+++|+
T Consensus       126 il~~----~~k~Elv~~L~~~~~  144 (199)
T PF06017_consen  126 ILES----DFKTELVTILCKAYK  144 (199)
T ss_pred             EEEe----CcHHHHHHHHHHHHH
Confidence            9998    788999999999884

Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex

>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT)

Probab=99.88  E-value=8.9e-23  Score=164.66  Aligned_cols=76  Identities=41%  Similarity=0.525  Sum_probs=69.3

Q ss_pred             CcceeEEEecCCCceeeeEEEEecCeEEEec-----cccccceeEeeeeccceeeEEeecCCCceEEEEcCCCCceEEEE
Q psy5801           1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLD-----SGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTI   75 (176)
Q Consensus         1 lfs~~V~K~nr~~K~~~R~lllT~~~iy~ld-----~~~~~k~~kr~i~l~~i~~vsvS~~~d~~~vih~~~~~Dl~~~~   75 (176)
                      +||+.|.|+||++|+++|+|+||++|+|++|     +.+ ...+||+|||++|+|||+|+++|++||||+|+++|+++++
T Consensus        51 lFs~~v~K~nr~~K~~~R~livT~~~iY~l~~~~~~~~~-~~~~kr~i~l~~I~~IsvS~~~D~~~vihv~~~~D~il~~  129 (199)
T PF06017_consen   51 LFSDRVQKYNRRNKPQPRILIVTDKAIYLLDQRKVKDPK-KYKLKRRIPLSDITGISVSPLSDNFFVIHVPGEGDLILES  129 (199)
T ss_pred             EEEEEEEEecCCCCccceEEEEeCCeEEEEEEeecCCce-eeEEEeccCcccccEEEEccCCCCEEEEEECCCCCEEEEe
Confidence            6999999999999999999999999999996     333 3456888999999999999999999999999999999988


Q ss_pred             ec
Q psy5801          76 IS   77 (176)
Q Consensus        76 ~~   77 (176)
                      ..
T Consensus       130 ~~  131 (199)
T PF06017_consen  130 DF  131 (199)
T ss_pred             Cc
Confidence            44

Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex

>KOG0164|consensus

Probab=99.78  E-value=5e-20  Score=168.70  Aligned_cols=98  Identities=51%  Similarity=0.731  Sum_probs=91.6

Q ss_pred             CCceeEEEEEEEEEecCCceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcEEEEe
Q psy5801          78 SEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTI  157 (176)
Q Consensus        78 ~~~~ilfs~~V~K~nr~~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~~~~~  157 (176)
                      .++.++||+.|.||||+||+..|.|++||.++|++|++| .++||+.|||.+++|||||+++|++||+|+.+..|++.|.
T Consensus       850 ~fg~Vlfs~~V~K~NrfnK~~~R~lllTd~~v~kld~~K-~k~mK~~I~l~nltgiSVss~~D~LfvlH~~~~~Dlv~~~  928 (1001)
T KOG0164|consen  850 TFGPVLFSSHVKKVNRFNKPRSRALLLTDRHVYKLDPKK-QKVMKQTIPLANLTGISVSSGSDQLFVLHVSDNKDLVVCL  928 (1001)
T ss_pred             CccceeehhhHHHhcccCCccceeEEeecCeEEEecchH-hhHhhcccchhhccceeeecCCCceEEEEecCCcchhhhh
Confidence            367999999999999999999999999999999999988 6899999999999999999999999999999888999987


Q ss_pred             c--cCCCchhhhHHHHHhhcC
Q psy5801         158 I--SSEDRVGELVGALASRYY  176 (176)
Q Consensus       158 ~--~~~~r~~E~v~~l~~~~~  176 (176)
                      .  ..++|++|+|++++.+|+
T Consensus       929 ~~~~~e~rVgElvg~l~~~~~  949 (1001)
T KOG0164|consen  929 DSVLQEDRVGELVGKLAAHYN  949 (1001)
T ss_pred             hhhhhHHHHHHHHHHHHHHHh
Confidence            6  556999999999999884

>KOG0164|consensus

Probab=99.65  E-value=3.2e-17  Score=150.43  Aligned_cols=76  Identities=50%  Similarity=0.719  Sum_probs=71.8

Q ss_pred             CcceeEEEecCCCceeeeEEEEecCeEEEeccccccceeEeeeeccceeeEEeecCCCceEEEEcCCCCceEEEEec
Q psy5801           1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIIS   77 (176)
Q Consensus         1 lfs~~V~K~nr~~K~~~R~lllT~~~iy~ld~~~~~k~~kr~i~l~~i~~vsvS~~~d~~~vih~~~~~Dl~~~~~~   77 (176)
                      |||++|.|+||+||++.|+|+|||+++|++|++| .+.||+.|||.+++|||||+++|++||+|+.+..|++.|+..
T Consensus       855 lfs~~V~K~NrfnK~~~R~lllTd~~v~kld~~K-~k~mK~~I~l~nltgiSVss~~D~LfvlH~~~~~Dlv~~~~~  930 (1001)
T KOG0164|consen  855 LFSSHVKKVNRFNKPRSRALLLTDRHVYKLDPKK-QKVMKQTIPLANLTGISVSSGSDQLFVLHVSDNKDLVVCLDS  930 (1001)
T ss_pred             eehhhHHHhcccCCccceeEEeecCeEEEecchH-hhHhhcccchhhccceeeecCCCceEEEEecCCcchhhhhhh
Confidence            6999999999999999999999999999999976 688999999999999999999999999999988899999843

>KOG0162|consensus

Probab=98.97  E-value=4.7e-10  Score=104.11  Aligned_cols=97  Identities=21%  Similarity=0.318  Sum_probs=83.9

Q ss_pred             ecCCceeEEEEEEEEEecCCceeeeEEEEecceEEEecCCc-------c--ceeeeeeeeccceeeEEecCCCCcEEEEE
Q psy5801          76 ISSEDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGA-------K--FKAMKRGMSLQEMTGLSVSPGSDQLVVIH  146 (176)
Q Consensus        76 ~~~~~~ilfs~~V~K~nr~~K~~~R~llvTd~~ly~ld~~k-------~--~k~~k~~i~l~~i~~vsvS~~~d~~~vih  146 (176)
                      -+..++++||+.+.||.|+.|+-.|.|++|-+++|.+..++       +  ..++|++|.+..|.+||+|+++|+|++|+
T Consensus       758 vgkkekV~Fa~~~tK~~R~~k~~kr~llLT~k~lylig~~kvk~gpekg~~~e~~~~kidv~~I~sVsLs~~QDD~~~l~  837 (1106)
T KOG0162|consen  758 VGKKEKVIFADTVTKYDRRFKPLKRDLLLTPKCLYLIGREKVKNGPEKGKVTEVLKRKIDVPQIKSVSLSNLQDDWVILY  837 (1106)
T ss_pred             hcccceEEEEeeecccccccccccceEEeccceEEEEeehhhhcCccccchhhhhhhccchhhhceeccccccccEEEEE
Confidence            36689999999999999999999999999999999996443       1  13358889999999999999999999999


Q ss_pred             eC-CCCcEEEEeccCCCchhhhHHHHHhhcC
Q psy5801         147 NN-KGNDLVFTIISSEDRVGELVGALASRYY  176 (176)
Q Consensus       147 ~~-~~~D~~~~~~~~~~r~~E~v~~l~~~~~  176 (176)
                      .- +++|-++.+    .-++||++.|.+.|+
T Consensus       838 ~~~~~~d~ll~t----~FKTEf~t~L~k~~~  864 (1106)
T KOG0162|consen  838 LGNDQYDSLLET----PFKTEFITLLKKRYE  864 (1106)
T ss_pred             ecCCCcchHhhh----hhHHHHHHHHHHHHH
Confidence            84 478888865    557999999999874

>KOG0162|consensus

Probab=98.36  E-value=2.8e-07  Score=86.11  Aligned_cols=73  Identities=21%  Similarity=0.300  Sum_probs=63.1

Q ss_pred             CcceeEEEecCCCceeeeEEEEecCeEEEeccccc---------cceeEeeeeccceeeEEeecCCCceEEEEcC-CCCc
Q psy5801           1 MFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAK---------FKAMKRGMSLQEMTGLSVSPGSDQLVVIHNN-KGND   70 (176)
Q Consensus         1 lfs~~V~K~nr~~K~~~R~lllT~~~iy~ld~~~~---------~k~~kr~i~l~~i~~vsvS~~~d~~~vih~~-~~~D   70 (176)
                      +||+.|.||+|+.|+-+|.|+||-+++|++..++-         ...++++|.+..|.+||+|+++|+||+++.- +++|
T Consensus       765 ~Fa~~~tK~~R~~k~~kr~llLT~k~lylig~~kvk~gpekg~~~e~~~~kidv~~I~sVsLs~~QDD~~~l~~~~~~~d  844 (1106)
T KOG0162|consen  765 IFADTVTKYDRRFKPLKRDLLLTPKCLYLIGREKVKNGPEKGKVTEVLKRKIDVPQIKSVSLSNLQDDWVILYLGNDQYD  844 (1106)
T ss_pred             EEEeeecccccccccccceEEeccceEEEEeehhhhcCccccchhhhhhhccchhhhceeccccccccEEEEEecCCCcc
Confidence            59999999999999999999999999999964430         1247889999999999999999999999984 4677


Q ss_pred             eEE
Q psy5801          71 LVF   73 (176)
Q Consensus        71 l~~   73 (176)
                      .++
T Consensus       845 ~ll  847 (1106)
T KOG0162|consen  845 SLL  847 (1106)
T ss_pred             hHh
Confidence            765

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A

Probab=96.80  E-value=0.031  Score=40.90  Aligned_cols=73  Identities=18%  Similarity=0.253  Sum_probs=51.4

Q ss_pred             CceeEEEEEEEEEecCCceeeeEEEEecc-eEEEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcEEEEe
Q psy5801          79 EDRVMFSAFVHKTNKFNRCADRALLVTDF-AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTI  157 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~K~~~R~llvTd~-~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~~~~~  157 (176)
                      ++.|+.+..|.|-..- -.+.|.|++||. .|+-+|+.+  ..+|--||++.-..+.+  .+..-|.||.|+ ..|.|..
T Consensus        10 ge~Il~~g~v~K~kgl-~~kkR~liLTd~PrL~Yvdp~~--~~~KGeI~~~~~l~v~~--k~~~~F~I~tp~-RtY~l~d   83 (104)
T PF14593_consen   10 GELILKQGYVKKRKGL-FAKKRQLILTDGPRLFYVDPKK--MVLKGEIPWSKELSVEV--KSFKTFFIHTPK-RTYYLED   83 (104)
T ss_dssp             T--EEEEEEEEEEETT-EEEEEEEEEETTTEEEEEETTT--TEEEEEE--STT-EEEE--CSSSEEEEEETT-EEEEEE-
T ss_pred             CCeEEEEEEEEEeece-EEEEEEEEEccCCEEEEEECCC--CeECcEEecCCceEEEE--ccCCEEEEECCC-cEEEEEC
Confidence            7889999999997433 388999999999 999999875  34588899996544444  444567999994 5777763

>PF12456 hSac2: Inositol phosphatase ; InterPro: IPR022158 This domain family is found in eukaryotes, and is approximately 120 amino acids in length

Probab=96.73  E-value=0.0042  Score=46.16  Aligned_cols=52  Identities=21%  Similarity=0.352  Sum_probs=39.4

Q ss_pred             EEEecCCC---ceeeeEEEEecCeEEEec--ccc-ccceeEeeeeccceeeEEeecCCC
Q psy5801           6 VHKTNKFN---RCADRALLVTDFAVYKLD--SGA-KFKAMKRGMSLQEMTGLSVSPGSD   58 (176)
Q Consensus         6 V~K~nr~~---K~~~R~lllT~~~iy~ld--~~~-~~k~~kr~i~l~~i~~vsvS~~~d   58 (176)
                      +..+|+.+   ..++|+||||++|+|...  ... +....+| |||++|.+|..-++..
T Consensus        37 L~~~~~~~~~~~e~E~vlLLTd~alyi~~YD~~~~kv~~~~r-i~L~~I~~I~~G~~~~   94 (115)
T PF12456_consen   37 LTEPDHWNKTENEEERVLLLTDKALYICKYDFIMEKVSQFQR-IPLNDIDKIQIGTFIT   94 (115)
T ss_pred             EEecCcccCCCcccceEEEEecCEEEEEEecCCCccEEEEEE-EecccCcEEEEeccCC
Confidence            45677888   999999999999999994  111 1234455 9999999999876543

The family is found in association with PF02383 from PFAM. hSac2 functions as an inositol polyphosphate 5-phosphatase.

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A

Probab=96.37  E-value=0.018  Score=42.23  Aligned_cols=67  Identities=22%  Similarity=0.227  Sum_probs=46.1

Q ss_pred             ceeEEEecCCCceeeeEEEEecC-eEEEeccccccceeEeeeeccceeeEEeecCCCceEEEEcCCCCceEEEE
Q psy5801           3 SAFVHKTNKFNRCADRALLVTDF-AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTI   75 (176)
Q Consensus         3 s~~V~K~nr~~K~~~R~lllT~~-~iy~ld~~~~~k~~kr~i~l~~i~~vsvS~~~d~~~vih~~~~~Dl~~~~   75 (176)
                      +..|.|- ++--.+.|.|++||. .+|-+|+.+  +.+|-.||++.-  +++...+..-|.||.| ...+.+..
T Consensus        16 ~g~v~K~-kgl~~kkR~liLTd~PrL~Yvdp~~--~~~KGeI~~~~~--l~v~~k~~~~F~I~tp-~RtY~l~d   83 (104)
T PF14593_consen   16 QGYVKKR-KGLFAKKRQLILTDGPRLFYVDPKK--MVLKGEIPWSKE--LSVEVKSFKTFFIHTP-KRTYYLED   83 (104)
T ss_dssp             EEEEEEE-ETTEEEEEEEEEETTTEEEEEETTT--TEEEEEE--STT---EEEECSSSEEEEEET-TEEEEEE-
T ss_pred             EEEEEEe-eceEEEEEEEEEccCCEEEEEECCC--CeECcEEecCCc--eEEEEccCCEEEEECC-CcEEEEEC
Confidence            4455554 222578999999999 999999865  667888999954  5555566568899999 46666543

>PF12456 hSac2: Inositol phosphatase ; InterPro: IPR022158 This domain family is found in eukaryotes, and is approximately 120 amino acids in length

Probab=95.94  E-value=0.042  Score=40.74  Aligned_cols=60  Identities=18%  Similarity=0.316  Sum_probs=43.5

Q ss_pred             CceeEEEEEEEEEecCC---ceeeeEEEEecceEEEec--CCc-cceeeeeeeeccceeeEEecCCC
Q psy5801          79 EDRVMFSAFVHKTNKFN---RCADRALLVTDFAVYKLD--SGA-KFKAMKRGMSLQEMTGLSVSPGS  139 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~---K~~~R~llvTd~~ly~ld--~~k-~~k~~k~~i~l~~i~~vsvS~~~  139 (176)
                      +|.++=.=.+...|..+   ..++|++++|++++|...  -.. +....+| +||.+|.+|..-++.
T Consensus        28 ~e~~i~gW~L~~~~~~~~~~~e~E~vlLLTd~alyi~~YD~~~~kv~~~~r-i~L~~I~~I~~G~~~   93 (115)
T PF12456_consen   28 DEEFIGGWLLTEPDHWNKTENEEERVLLLTDKALYICKYDFIMEKVSQFQR-IPLNDIDKIQIGTFI   93 (115)
T ss_pred             CCcEEEEEEEEecCcccCCCcccceEEEEecCEEEEEEecCCCccEEEEEE-EecccCcEEEEeccC
Confidence            45555555677788888   999999999999998773  221 1333455 999999999886443

The family is found in association with PF02383 from PFAM. hSac2 functions as an inositol polyphosphate 5-phosphatase.

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain

Probab=95.33  E-value=0.093  Score=37.42  Aligned_cols=56  Identities=18%  Similarity=0.249  Sum_probs=41.8

Q ss_pred             ceeeeEEEEecC-eEEEeccccccceeEeeeeccceeeEEeecCCCceEEEEcCCCCceEE
Q psy5801          14 RCADRALLVTDF-AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVF   73 (176)
Q Consensus        14 K~~~R~lllT~~-~iy~ld~~~~~k~~kr~i~l~~i~~vsvS~~~d~~~vih~~~~~Dl~~   73 (176)
                      -.+.|.|+|||. .++-+|+.+  +.+|..||++.+ ++++-..+..-|.||.|+ ..+.+
T Consensus        14 f~kkR~LiLTd~PrL~yvdp~~--~~~KgeIp~s~~-~l~v~~~~~~~F~I~Tp~-rty~l   70 (89)
T cd01262          14 FAKKRQLILTNGPRLIYVDPVK--KVVKGEIPWSDV-ELRVEVKNSSHFFVHTPN-KVYSF   70 (89)
T ss_pred             ccceeeEEEecCceEEEEcCCc--CeEEeEeccccc-ceEEEEecCccEEEECCC-ceEEE
Confidence            568999999995 567778764  667888999993 466666666667889995 55554

3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF14470 bPH_3: Bacterial PH domain

Probab=94.79  E-value=0.72  Score=31.85  Aligned_cols=91  Identities=14%  Similarity=0.146  Sum_probs=57.4

Q ss_pred             CceeEEEEEEEEEecCCceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecC-CCCcEEEEEeCCCCcEEEEe
Q psy5801          79 EDRVMFSAFVHKTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP-GSDQLVVIHNNKGNDLVFTI  157 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~-~~d~~~vih~~~~~D~~~~~  157 (176)
                      +|.|++.... .++......+-.+++||+.++-+...-.......-+|+.+|++|+... .-.+-+.++.+ +..+-+..
T Consensus         4 ~E~I~~~~~~-~~~~~~~~~~g~l~~TnkRlif~~~~~~~~~~~~~i~y~~I~~v~~~~g~~~~~i~i~~~-~~~~~i~~   81 (96)
T PF14470_consen    4 DEEIEYVAVG-SYNYFFTSFPGVLVLTNKRLIFYSKGMFGGKKFESIPYDDITSVSFKKGILGGKITIETN-GEKIKIDN   81 (96)
T ss_pred             CCEEEEEEEE-EEeecccCceeEEEEeCCEEEEEEcccCCCceEEEEEhhheEEEEEEccccccEEEEEEC-CEEEEEEE
Confidence            5666666544 445446677889999999999887531112224559999999999984 33456788884 34555432


Q ss_pred             ccCCCchhhhHHHHH
Q psy5801         158 ISSEDRVGELVGALA  172 (176)
Q Consensus       158 ~~~~~r~~E~v~~l~  172 (176)
                       -..+.+.+++..|.
T Consensus        82 -i~k~~~~~~~~~i~   95 (96)
T PF14470_consen   82 -IQKGDVKEFYEYIK   95 (96)
T ss_pred             -cCHHHHHHHHHHHh
Confidence             12244555555543

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain

Probab=93.15  E-value=1.7  Score=31.00  Aligned_cols=85  Identities=16%  Similarity=0.218  Sum_probs=54.0

Q ss_pred             EEEEEEEEEecCCceeeeEEEEecc-eEEEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcEEEEeccCC
Q psy5801          83 MFSAFVHKTNKFNRCADRALLVTDF-AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSE  161 (176)
Q Consensus        83 lfs~~V~K~nr~~K~~~R~llvTd~-~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~~~~~~~~~  161 (176)
                      ++...|.|-..- -.+.|.|++||. .++-+|+.+  +..|--||++.+ ++++-..+..-|.+|.|+ .+|.++  +.+
T Consensus         2 l~~g~v~Kr~gl-f~kkR~LiLTd~PrL~yvdp~~--~~~KgeIp~s~~-~l~v~~~~~~~F~I~Tp~-rty~le--D~~   74 (89)
T cd01262           2 LKIGAVKKRKGL-FAKKRQLILTNGPRLIYVDPVK--KVVKGEIPWSDV-ELRVEVKNSSHFFVHTPN-KVYSFE--DPK   74 (89)
T ss_pred             ceeeeeeehhcc-ccceeeEEEecCceEEEEcCCc--CeEEeEeccccc-ceEEEEecCccEEEECCC-ceEEEE--CCC
Confidence            344455553332 357888999886 556678864  345888999993 455554444556889997 477776  344


Q ss_pred             CchhhhHHHHHhh
Q psy5801         162 DRVGELVGALASR  174 (176)
Q Consensus       162 ~r~~E~v~~l~~~  174 (176)
                      .+..+-+..|.+.
T Consensus        75 ~~a~~W~~~I~~~   87 (89)
T cd01262          75 GRASQWKKAIEDL   87 (89)
T ss_pred             CCHHHHHHHHHHH
Confidence            5666666666554

3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.

>PF14470 bPH_3: Bacterial PH domain

Probab=92.11  E-value=1  Score=31.09  Aligned_cols=59  Identities=15%  Similarity=0.094  Sum_probs=41.2

Q ss_pred             EecCCCceeeeEEEEecCeEEEeccccccceeEeeeeccceeeEEeec-CCCceEEEEcC
Q psy5801           8 KTNKFNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP-GSDQLVVIHNN   66 (176)
Q Consensus         8 K~nr~~K~~~R~lllT~~~iy~ld~~~~~k~~kr~i~l~~i~~vsvS~-~~d~~~vih~~   66 (176)
                      .+|.....++=.+++||+.++.....-..+.....+|+.+|++++... +-.+-+.++.+
T Consensus        14 ~~~~~~~~~~g~l~~TnkRlif~~~~~~~~~~~~~i~y~~I~~v~~~~g~~~~~i~i~~~   73 (96)
T PF14470_consen   14 SYNYFFTSFPGVLVLTNKRLIFYSKGMFGGKKFESIPYDDITSVSFKKGILGGKITIETN   73 (96)
T ss_pred             EEeecccCceeEEEEeCCEEEEEEcccCCCceEEEEEhhheEEEEEEccccccEEEEEEC
Confidence            334335577889999999999997631112335669999999999995 23345677773

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=92.09  E-value=2.5  Score=28.35  Aligned_cols=87  Identities=16%  Similarity=0.228  Sum_probs=57.2

Q ss_pred             EEEEEEEe-cCCceeeeEEEEecceEEEecCCc---cceeeeeeeeccceeeEEecCC-------CCcEEEEEeCCCCcE
Q psy5801          85 SAFVHKTN-KFNRCADRALLVTDFAVYKLDSGA---KFKAMKRGMSLQEMTGLSVSPG-------SDQLVVIHNNKGNDL  153 (176)
Q Consensus        85 s~~V~K~n-r~~K~~~R~llvTd~~ly~ld~~k---~~k~~k~~i~l~~i~~vsvS~~-------~d~~~vih~~~~~D~  153 (176)
                      +..+.+.. ...+-+.|.+++++..|+-+....   .... +..|+|.+++-....+.       ..+.|.|+.+++.-+
T Consensus         4 ~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~-~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~   82 (104)
T PF00169_consen    4 EGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKP-KGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGKSY   82 (104)
T ss_dssp             EEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSE-SEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSEEE
T ss_pred             EEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceee-eEEEEecCceEEEcCccccccccCCCcEEEEEeCCCcEE
Confidence            34555555 445889999999999999887554   2444 66699999944444333       566889999887677


Q ss_pred             EEEeccCCCchhhhHHHHHh
Q psy5801         154 VFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       154 ~~~~~~~~~r~~E~v~~l~~  173 (176)
                      .+++ .+++-..+=+..|..
T Consensus        83 ~~~~-~s~~~~~~W~~~i~~  101 (104)
T PF00169_consen   83 LFSA-ESEEERKRWIQAIQK  101 (104)
T ss_dssp             EEEE-SSHHHHHHHHHHHHH
T ss_pred             EEEc-CCHHHHHHHHHHHHH
Confidence            7776 333333444444443

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

>cd00900 PH-like Pleckstrin homology-like domain

Probab=91.09  E-value=3  Score=27.29  Aligned_cols=61  Identities=20%  Similarity=0.265  Sum_probs=44.3

Q ss_pred             CceeeeEEEEecceEEEecCCccceeee-eeeeccceeeEEecCC---CCcEEEEEeCC--CCcEEEEe
Q psy5801          95 NRCADRALLVTDFAVYKLDSGAKFKAMK-RGMSLQEMTGLSVSPG---SDQLVVIHNNK--GNDLVFTI  157 (176)
Q Consensus        95 ~K~~~R~llvTd~~ly~ld~~k~~k~~k-~~i~l~~i~~vsvS~~---~d~~~vih~~~--~~D~~~~~  157 (176)
                      +..+.|.+.+++..++.+++...... . ..+|+..++ ++..+.   .+..|.+..+.  ...+.|++
T Consensus        17 ~~w~~~~~~l~~~~l~~~~~~~~~~~-~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~   83 (99)
T cd00900          17 KRWKRRWFFLFDDGLLLYKSDDKKEI-KPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGRRVFVFQA   83 (99)
T ss_pred             cCceeeEEEEECCEEEEEEcCCCCcC-CCCEEEccceE-EEECCCCCCCCceEEEECCCCCcEEEEEEc
Confidence            57889999999999998876531221 2 248999988 777764   45677787775  67788876

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>cd00900 PH-like Pleckstrin homology-like domain

Probab=87.39  E-value=6.1  Score=25.75  Aligned_cols=61  Identities=20%  Similarity=0.277  Sum_probs=40.7

Q ss_pred             CceeeeEEEEecCeEEEeccccccceeE-eeeeccceeeEEeecC---CCceEEEEcCC--CCceEEEE
Q psy5801          13 NRCADRALLVTDFAVYKLDSGAKFKAMK-RGMSLQEMTGLSVSPG---SDQLVVIHNNK--GNDLVFTI   75 (176)
Q Consensus        13 ~K~~~R~lllT~~~iy~ld~~~~~k~~k-r~i~l~~i~~vsvS~~---~d~~~vih~~~--~~Dl~~~~   75 (176)
                      +..++|.+.|++..++..+++. .+... ..+|+..+. ++..+.   .+..|.|..++  +..+.+++
T Consensus        17 ~~w~~~~~~l~~~~l~~~~~~~-~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~   83 (99)
T cd00900          17 KRWKRRWFFLFDDGLLLYKSDD-KKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRGRRVFVFQA   83 (99)
T ss_pred             cCceeeEEEEECCEEEEEEcCC-CCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCCCcEEEEEEc
Confidence            5789999999999999997643 11112 248888887 666654   34566666664  45555544

Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.

>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains

Probab=86.74  E-value=5.2  Score=29.32  Aligned_cols=78  Identities=13%  Similarity=0.196  Sum_probs=52.8

Q ss_pred             ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEe-cCCCCcEEEEEeCCCCcEEEEec--cCCCchhhhHHHHH
Q psy5801          96 RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSV-SPGSDQLVVIHNNKGNDLVFTII--SSEDRVGELVGALA  172 (176)
Q Consensus        96 K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsv-S~~~d~~~vih~~~~~D~~~~~~--~~~~r~~E~v~~l~  172 (176)
                      +.++-.|.++...|..+|+.+ -.++-. .|+..|+=.+. .+....+|.+..+++.+-.+.||  ...+...|++..|.
T Consensus        50 ~~~~V~l~vs~~gI~v~~~~t-~~~l~~-~~i~~Is~~~~~d~~~~~~Fafi~~~~~~~~~~CHVF~~~~~A~~i~~~i~  127 (140)
T PF00640_consen   50 KPQKVTLNVSSDGIKVIDPDT-GEVLMS-HPIRRISFCAVGDPDDKRVFAFIARDPRSSRFYCHVFKCEDQAQEICQAIG  127 (140)
T ss_dssp             TSEEEEEEEETTEEEEEETTT-TCEEEE-EEGGGEEEEEESSTTETTEEEEEEEETSSSCEEEEEEEESSCHHHHHHHHH
T ss_pred             cCeEEEEEEcCCeEEEecCcc-cccccc-CCccceEEEEecCCCcceEEEEEeccCCCCccccEeeeHhhHHHHHHHHHH
Confidence            567778889999999998765 333333 79999999999 66656677775544333222222  12237788888888


Q ss_pred             hhc
Q psy5801         173 SRY  175 (176)
Q Consensus       173 ~~~  175 (176)
                      ++|
T Consensus       128 ~aF  130 (140)
T PF00640_consen  128 QAF  130 (140)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain

Probab=84.28  E-value=14  Score=26.90  Aligned_cols=91  Identities=13%  Similarity=0.104  Sum_probs=50.5

Q ss_pred             eeEEEEEEEEEecCCceeeeEEEEecceEEEec--CCccceeeeeeeeccceeeEEecCC--CCcEEEEEeCCCCcEEEE
Q psy5801          81 RVMFSAFVHKTNKFNRCADRALLVTDFAVYKLD--SGAKFKAMKRGMSLQEMTGLSVSPG--SDQLVVIHNNKGNDLVFT  156 (176)
Q Consensus        81 ~ilfs~~V~K~nr~~K~~~R~llvTd~~ly~ld--~~k~~k~~k~~i~l~~i~~vsvS~~--~d~~~vih~~~~~D~~~~  156 (176)
                      ..+-.....|++|++-.+..+|+..|.=+|-=-  ..++|+. +..+||..+.=..+...  -.+-|.|..|++ -++++
T Consensus         3 ~li~eG~L~K~~rk~~~~R~ffLFnD~LvY~~~~~~~~~~~~-~~~i~L~~~~v~~~~d~~~~~n~f~I~~~~k-Sf~v~   80 (104)
T cd01218           3 VLVGEGVLTKMCRKKPKQRQFFLFNDILVYGNIVISKKKYNK-QHILPLEGVQVESIEDDGIERNGWIIKTPTK-SFAVY   80 (104)
T ss_pred             EEEecCcEEEeecCCCceEEEEEecCEEEEEEeecCCceeeE-eeEEEccceEEEecCCcccccceEEEecCCe-EEEEE
Confidence            344455678999777444456667776666311  1223665 56689988743344321  124567777765 44443


Q ss_pred             eccCCCchhhhHHHHHhh
Q psy5801         157 IISSEDRVGELVGALASR  174 (176)
Q Consensus       157 ~~~~~~r~~E~v~~l~~~  174 (176)
                      . .+.+-+.|-+..|.++
T Consensus        81 A-~s~~eK~eWl~~i~~a   97 (104)
T cd01218          81 A-ATETEKREWMLHINKC   97 (104)
T ss_pred             c-CCHHHHHHHHHHHHHH
Confidence            3 2334446666555543

Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

Probab=83.83  E-value=8.7  Score=26.58  Aligned_cols=75  Identities=17%  Similarity=0.120  Sum_probs=41.9

Q ss_pred             ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCC-CCcEEEEEeCCCCcEEEEeccCCCchhhhHHHHH
Q psy5801          96 RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG-SDQLVVIHNNKGNDLVFTIISSEDRVGELVGALA  172 (176)
Q Consensus        96 K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~-~d~~~vih~~~~~D~~~~~~~~~~r~~E~v~~l~  172 (176)
                      .=+.|.+++++..||-+.....-++ +..|||...+-...... ....|-|-.|+..-+.|+. .+++-..+=+.+|.
T Consensus        19 ~WkkrwfvL~~~~L~yyk~~~~~~~-~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a-~s~~e~~~Wi~ai~   94 (96)
T cd01260          19 KWARRWFVLKGTTLYWYRSKQDEKA-EGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAA-ETLDDLSQWVNHLI   94 (96)
T ss_pred             CceeEEEEEECCEEEEECCCCCCcc-ceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEe-CCHHHHHHHHHHHH
Confidence            3568999999999988864432334 55599998643333222 2333444334435667765 23233344444443

Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet

>smart00233 PH Pleckstrin homology domain

Probab=83.66  E-value=9.7  Score=24.74  Aligned_cols=72  Identities=10%  Similarity=0.123  Sum_probs=48.0

Q ss_pred             EEEEEEEec--CCceeeeEEEEecceEEEecCCccc--eeeeeeeeccceeeEEecCC-----CCcEEEEEeCCCCcEEE
Q psy5801          85 SAFVHKTNK--FNRCADRALLVTDFAVYKLDSGAKF--KAMKRGMSLQEMTGLSVSPG-----SDQLVVIHNNKGNDLVF  155 (176)
Q Consensus        85 s~~V~K~nr--~~K~~~R~llvTd~~ly~ld~~k~~--k~~k~~i~l~~i~~vsvS~~-----~d~~~vih~~~~~D~~~  155 (176)
                      ...+.+...  ...-++|.+++++..++.......-  ......|||.+. .++....     .++.|.|..++..-+.+
T Consensus         4 ~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~f~l~~~~~~~~~f   82 (102)
T smart00233        4 EGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGI-TVREAPDPDSAKKPHCFEIKTADRRSYLL   82 (102)
T ss_pred             eEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcC-EEEeCCCCccCCCceEEEEEecCCceEEE
Confidence            345555554  5678999999999999887654210  122555999998 6666554     35677777766547777


Q ss_pred             Ee
Q psy5801         156 TI  157 (176)
Q Consensus       156 ~~  157 (176)
                      .+
T Consensus        83 ~~   84 (102)
T smart00233       83 QA   84 (102)
T ss_pred             Ec
Confidence            65

Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain

Probab=82.31  E-value=8.4  Score=27.61  Aligned_cols=72  Identities=11%  Similarity=0.086  Sum_probs=42.0

Q ss_pred             eeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecC---CC-CcEEEEEeCCCCcEEEEeccCCCchhhhHHHHH
Q psy5801          97 CADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP---GS-DQLVVIHNNKGNDLVFTIISSEDRVGELVGALA  172 (176)
Q Consensus        97 ~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~---~~-d~~~vih~~~~~D~~~~~~~~~~r~~E~v~~l~  172 (176)
                      -+.|.|.+|+..|+=.+... -+. +..|||+.|.++..-.   .+ .+.|-|-.|+ .-+.+.+ ++++-..|=+.+|.
T Consensus        21 ~KkRwF~Lt~~~L~Y~k~~~-~~~-~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~-r~~yi~a-~s~~E~~~Wi~al~   96 (98)
T cd01244          21 FKKRYFQLTTTHLSWAKDVQ-CKK-SALIKLAAIKGTEPLSDKSFVNVDIITIVCED-DTMQLQF-EAPVEATDWLNALE   96 (98)
T ss_pred             CceeEEEECCCEEEEECCCC-Cce-eeeEEccceEEEEEcCCcccCCCceEEEEeCC-CeEEEEC-CCHHHHHHHHHHHh
Confidence            36899999999997766433 333 6669999999986422   22 2334444453 4455544 23222344444443

RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.

>PF06713 bPH_4: Bacterial PH domain; InterPro: IPR009589 This entry is represented by Bacteriophage SP-beta, YolF

Probab=81.81  E-value=13  Score=25.07  Aligned_cols=64  Identities=11%  Similarity=0.121  Sum_probs=39.5

Q ss_pred             EEecceEEEecCCccceeeeeeeeccceeeEEecC--CC-----CcEEEEEeCCCCcEEEEeccCCCchhhhHHHHHhhc
Q psy5801         103 LVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP--GS-----DQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRY  175 (176)
Q Consensus       103 lvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~--~~-----d~~~vih~~~~~D~~~~~~~~~~r~~E~v~~l~~~~  175 (176)
                      .+++..|..--.     ..|.+||+++|++|+-+.  +.     -+-+.|+.. .++.++.+  . ....||+..|.+.+
T Consensus         4 ~i~~~~L~I~~G-----~~~~~I~i~~I~~I~~~~~~~~~~a~S~~rl~I~y~-~~~~i~Is--P-~~~~~FI~~L~k~n   74 (74)
T PF06713_consen    4 IIEDDYLIIKCG-----FFKKKIPIEDIRSIRPTKNPLSSPALSLDRLEIYYG-KYKSILIS--P-KDKEEFIAELQKRN   74 (74)
T ss_pred             EEeCCEEEEEEC-----CcccEEEhHHccEEEecCCccccccccccEEEEEEC-CCCEEEEE--C-CCHHHHHHHHHhhC
Confidence            345555544322     235559999999998873  11     123466665 45666554  2 55699999998753

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical proteins specific to Oceanobacillus and Bacillus species. Members of this family are typically around 130 residues in length. The function of this family is unknown.

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]

Probab=80.47  E-value=14  Score=24.50  Aligned_cols=71  Identities=14%  Similarity=0.235  Sum_probs=46.0

Q ss_pred             eeEEEec-CCCceeeeEEEEecCeEEEeccccc--cceeEeeeeccceeeEEeecC--------CCceEEEEcCCCCceE
Q psy5801           4 AFVHKTN-KFNRCADRALLVTDFAVYKLDSGAK--FKAMKRGMSLQEMTGLSVSPG--------SDQLVVIHNNKGNDLV   72 (176)
Q Consensus         4 ~~V~K~n-r~~K~~~R~lllT~~~iy~ld~~~~--~k~~kr~i~l~~i~~vsvS~~--------~d~~~vih~~~~~Dl~   72 (176)
                      ..+.|.. ...+-++|.++|++..++.-+....  ....+..|+|.++ .|+-.+.        ..+.|.|+.+++.-+.
T Consensus         5 G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~~   83 (104)
T PF00169_consen    5 GWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDC-TVRPDPSSDFLSNKKRKNCFEITTPNGKSYL   83 (104)
T ss_dssp             EEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTE-EEEEETSSTSTSTSSSSSEEEEEETTSEEEE
T ss_pred             EEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCc-eEEEcCccccccccCCCcEEEEEeCCCcEEE
Confidence            3445555 3458899999999999998875441  2233556999998 4554433        3346677776654555


Q ss_pred             EEE
Q psy5801          73 FTI   75 (176)
Q Consensus        73 ~~~   75 (176)
                      +++
T Consensus        84 ~~~   86 (104)
T PF00169_consen   84 FSA   86 (104)
T ss_dssp             EEE
T ss_pred             EEc
Confidence            554

The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	176
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	96.08
1w1g_A	151	HPDK1, 3-phosphoinositide dependent protein kinase	95.57
2dn6_A	115	KIAA0640 protein; PH domain, structural genomics,	94.08
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	93.81
1u5d_A	108	SKAP55, SRC kinase-associated phosphoprotein of 55	92.7
1x05_A	129	Pleckstrin; PH domain, structural genomics, NPPSFA	92.53
2i5f_A	109	Pleckstrin; PH domain, protein-inositol phosphate	92.1
1pls_A	113	Pleckstrin homology domain; phosphorylation; NMR {	91.35
1v89_A	118	Hypothetical protein KIAA0053; pleckstrin homology	89.56
2dhk_A	119	TBC1 domain family member 2; PH domain, paris-1, s	88.72
1eaz_A	125	Tandem PH domain containing protein-1; lipid-bindi	88.5
1u5f_A	148	SRC-associated adaptor protein; PH domain of SKAP-	88.16
2d9y_A	117	Pleckstrin homology domain-containing protein fami	87.56
2dkp_A	128	Pleckstrin homology domain-containing family A mem	86.86
3a58_A	320	Exocyst complex component SEC3; protein complex, P	86.38
1wgq_A	109	FYVE, rhogef and PH domain containing 6; ethanol d	85.54
2lul_A	164	Tyrosine-protein kinase TEC; structural genomics,	83.66
1u5e_A	211	SRC-associated adaptor protein; novel dimerization	83.42
2d9x_A	120	Oxysterol binding protein-related protein 11; PH d	83.15
3tfm_A	228	Myosin X; split PH domain, motor protein; 2.53A {R	82.73
1x1g_A	129	Pleckstrin 2; PH domain, structural genomics, rike	82.45
2cod_A	115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	81.32

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A

Probab=96.08  E-value=0.065  Score=40.68  Aligned_cols=87  Identities=14%  Similarity=0.164  Sum_probs=61.8

Q ss_pred             CceeEEEEEEEEEecCCceeeeEEEEecceE-EEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcEEEEe
Q psy5801          79 EDRVMFSAFVHKTNKFNRCADRALLVTDFAV-YKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTI  157 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~K~~~R~llvTd~~l-y~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~~~~~  157 (176)
                      ++.|+....|.|-... ..+.|.|++|+.-. |-+|+.+  +.+|.-||++.  .+++-..+|..|.||+|+ --|-++-
T Consensus        49 ge~Ilk~G~v~KrkGl-~~kkR~liLT~~PrL~Yvdp~~--~~~KGeIpls~--~l~ve~k~~~~F~I~Tp~-RtY~~~d  122 (151)
T 1w1g_A           49 NNLILKMGPVDKRKGL-FARRRQLLLTEGPHLYYVDPVN--KVLKGEIPWSQ--ELRPEAKNFKTFFVHTPN-RTYYLMD  122 (151)
T ss_dssp             TCCEEEEEEEEEEETT-EEEEEEEEEETTTEEEEEETTT--TEEEEEECCCT--TCEEEESSSSEEEEEETT-EEEEEEC
T ss_pred             CCcEEEEEEEEecccC-cceeEEEEEcCCceEEEEcCcc--ccccceEecCC--CeeEEEcCCCEEEEECCC-ceEEEEc
Confidence            6778888888886443 36799999997655 5567764  34587899996  566666778899999998 5777763


Q ss_pred             ccCCCchhhhHHHHHh
Q psy5801         158 ISSEDRVGELVGALAS  173 (176)
Q Consensus       158 ~~~~~r~~E~v~~l~~  173 (176)
                        ...+..|=+.+|.+
T Consensus       123 --~~~~AqeWv~aI~~  136 (151)
T 1w1g_A          123 --PSGNAHKWCRKIQE  136 (151)
T ss_dssp             --TTSCHHHHHHHHHH
T ss_pred             --CccCHHHHHHHHHH
Confidence              34555666665544

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A

Probab=95.57  E-value=0.042  Score=41.78  Aligned_cols=65  Identities=18%  Similarity=0.190  Sum_probs=47.8

Q ss_pred             eeEEEecCCC-ceeeeEEEEecC-eEEEeccccccceeEeeeeccceeeEEeecCCCceEEEEcCCCCceEEEE
Q psy5801           4 AFVHKTNKFN-RCADRALLVTDF-AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTI   75 (176)
Q Consensus         4 ~~V~K~nr~~-K~~~R~lllT~~-~iy~ld~~~~~k~~kr~i~l~~i~~vsvS~~~d~~~vih~~~~~Dl~~~~   75 (176)
                      ..|.|-  +| ..+.|.|+||+. .+|-+|+..  +.+|..||++.  .+++-..+|..|.||+|+ ..|-++.
T Consensus        56 G~v~Kr--kGl~~kkR~liLT~~PrL~Yvdp~~--~~~KGeIpls~--~l~ve~k~~~~F~I~Tp~-RtY~~~d  122 (151)
T 1w1g_A           56 GPVDKR--KGLFARRRQLLLTEGPHLYYVDPVN--KVLKGEIPWSQ--ELRPEAKNFKTFFVHTPN-RTYYLMD  122 (151)
T ss_dssp             EEEEEE--ETTEEEEEEEEEETTTEEEEEETTT--TEEEEEECCCT--TCEEEESSSSEEEEEETT-EEEEEEC
T ss_pred             EEEEec--ccCcceeEEEEEcCCceEEEEcCcc--ccccceEecCC--CeeEEEcCCCEEEEECCC-ceEEEEc
Confidence            344443  33 567999999965 567778754  66788899995  677888889999999996 6665543

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.08  E-value=0.77  Score=31.23  Aligned_cols=92  Identities=14%  Similarity=0.154  Sum_probs=58.7

Q ss_pred             CceeEEEEEEEEEecCC-ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCC---CcEEEEEeCCCCcEE
Q psy5801          79 EDRVMFSAFVHKTNKFN-RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGS---DQLVVIHNNKGNDLV  154 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~-K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~---d~~~vih~~~~~D~~  154 (176)
                      .+.++.+..+.|-.... .=+.|.|++++..|+-+...+..+. +..|+|..+..|...+..   ...|.|..++ .-+.
T Consensus         5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~-r~~~   82 (115)
T 2dn6_A            5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDK-KGDILLDENCCVESLPDKDGKKCLFLVKCFD-KTFE   82 (115)
T ss_dssp             CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTCSSE-EEEECCCTTCEEEEECCCTTCCSEEEEECSS-CEEE
T ss_pred             CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCCccc-CcEEEecCcEEEEECCCCCCCeeEEEEEeCC-CEEE
Confidence            45566777777765433 4578999999999988875432344 566999998888775432   3477887764 5677


Q ss_pred             EEeccCCCchhhhHHHHHh
Q psy5801         155 FTIISSEDRVGELVGALAS  173 (176)
Q Consensus       155 ~~~~~~~~r~~E~v~~l~~  173 (176)
                      |+. .+++-..+=+..|..
T Consensus        83 l~a-~s~~e~~~Wi~ai~~  100 (115)
T 2dn6_A           83 ISA-SDKKKKQEWIQAIHS  100 (115)
T ss_dssp             EEC-SSHHHHHHHHHHHHH
T ss_pred             EEc-CCHHHHHHHHHHHHH
Confidence            765 222223444444443

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=93.81  E-value=0.69  Score=31.76  Aligned_cols=90  Identities=12%  Similarity=0.187  Sum_probs=57.7

Q ss_pred             CceeEEEEEEEEEec-C-CceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcEEEE
Q psy5801          79 EDRVMFSAFVHKTNK-F-NRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFT  156 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr-~-~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~~~~  156 (176)
                      ...++.+..+.|-.. . ..=+.|.|++++..|+-+......+. +..|+|..++.|....  ++.|.|+.+ +..+.|+
T Consensus         5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~-~g~i~l~~~~~v~~~~--~~~F~i~~~-~r~~~l~   80 (115)
T 2cod_A            5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYS-KGIIPLSAISTVRVQG--DNKFEVVTT-QRTFVFR   80 (115)
T ss_dssp             CSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSC-CCEEETTTEEEEEEET--TTEEEEEES-SCCEEEE
T ss_pred             CCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCccc-CCEEECCcceEEEeCC--CCEEEEEeC-CcEEEEE
Confidence            445666777777654 2 24578999999999987765432334 5569999998777654  667788765 4677776


Q ss_pred             eccCCCchhhhHHHHHh
Q psy5801         157 IISSEDRVGELVGALAS  173 (176)
Q Consensus       157 ~~~~~~r~~E~v~~l~~  173 (176)
                      . .+++-..+=+..|.+
T Consensus        81 a-~s~~e~~~Wi~~l~~   96 (115)
T 2cod_A           81 V-EKEEERNDWISILLN   96 (115)
T ss_dssp             C-SSHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHH
Confidence            5 222223444444443

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1

Probab=92.70  E-value=1.4  Score=29.33  Aligned_cols=91  Identities=12%  Similarity=0.130  Sum_probs=55.7

Q ss_pred             eeEEEEEEEEEecC-----CceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEec-----CCCCcEEEEEeCCC
Q psy5801          81 RVMFSAFVHKTNKF-----NRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVS-----PGSDQLVVIHNNKG  150 (176)
Q Consensus        81 ~ilfs~~V~K~nr~-----~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS-----~~~d~~~vih~~~~  150 (176)
                      .++.+..+.|-...     ..=+.|.+++++..|+-+...+..+. +..|+|...+-....     ......|.|..|+.
T Consensus         2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~   80 (108)
T 1u5d_A            2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQP-KGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDR   80 (108)
T ss_dssp             CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSC-SEEEECTTCEEEECGGGCSSGGGGGEEEEECSSS
T ss_pred             CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCCC-CEEEEecceEEEeCCccccccCCcceEEEEcCCC
Confidence            35566666666543     23478999999999988865432333 556999998744432     12235778887776


Q ss_pred             CcEEEEeccCCCchhhhHHHHHh
Q psy5801         151 NDLVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       151 ~D~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      .-+.|+. .+++-..+=+..|.+
T Consensus        81 r~~~l~a-~s~~e~~~Wi~ai~~  102 (108)
T 1u5d_A           81 RTYEFTA-TSPAEARDWVDQISF  102 (108)
T ss_dssp             CCEEEEC-SSHHHHHHHHHHHHH
T ss_pred             cEEEEEC-CCHHHHHHHHHHHHH
Confidence            6788876 222233444444443

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A

Probab=92.53  E-value=1.8  Score=30.15  Aligned_cols=93  Identities=11%  Similarity=0.094  Sum_probs=57.3

Q ss_pred             CceeEEEEEEEEEecCC-ceeeeEEEEecc--eEEEecCCccceeeeeeeeccceeeEEecCC-------CCcEEEEEeC
Q psy5801          79 EDRVMFSAFVHKTNKFN-RCADRALLVTDF--AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG-------SDQLVVIHNN  148 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~-K~~~R~llvTd~--~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~-------~d~~~vih~~  148 (176)
                      .+.++.+....|-.... .=+.|.|++++.  .|+-+......+. +..|+|...+-..+...       ....|.|..+
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~-~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~   93 (129)
T 1x05_A           15 RGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDP-LGAIHLRGCVVTSVESNSNGRKSEEENLFEIITA   93 (129)
T ss_dssp             CSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCSSC-SEEEECTTCEEEECCCCCCSSSCSSCSEEEEECT
T ss_pred             cCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCCCcc-eeEEEccCCEEEEccCCccccccCCCeEEEEEcC
Confidence            56677777888754332 347899999986  6777754332334 55599998765555433       4467788888


Q ss_pred             CCCcEEEEeccCCCchhhhHHHHHh
Q psy5801         149 KGNDLVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       149 ~~~D~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      ++.-+.|+. .+++-..+=+..|..
T Consensus        94 ~~~~~~l~a-~s~~e~~~Wi~al~~  117 (129)
T 1x05_A           94 DEVHYFLQA-ATPKERTEWIKAIQM  117 (129)
T ss_dssp             TCCCCEEEC-SSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHH
Confidence            766677765 222223444444444

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A

Probab=92.10  E-value=1.8  Score=28.98  Aligned_cols=94  Identities=11%  Similarity=0.089  Sum_probs=57.7

Q ss_pred             CceeEEEEEEEEEecCC-ceeeeEEEEecc--eEEEecCCccceeeeeeeeccceeeEEecCC-------CCcEEEEEeC
Q psy5801          79 EDRVMFSAFVHKTNKFN-RCADRALLVTDF--AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG-------SDQLVVIHNN  148 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~-K~~~R~llvTd~--~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~-------~d~~~vih~~  148 (176)
                      .+.++.+..+.|-.... .=+.|.|++++.  .|+-+......+. +..|+|...+-..+...       ....|.|..|
T Consensus         4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~-~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~   82 (109)
T 2i5f_A            4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDP-LGAIHLRGCVVTSVESNSNGRKSEEENLFEIITA   82 (109)
T ss_dssp             CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSC-SEEEECTTCEEEEECC--------CCSEEEEECT
T ss_pred             cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCCCCc-cEEEECCCCEEEEccCCcccccCCCceEEEEEeC
Confidence            34566777777755433 357899999986  7877754332334 55599998654455433       4567788888


Q ss_pred             CCCcEEEEeccCCCchhhhHHHHHhh
Q psy5801         149 KGNDLVFTIISSEDRVGELVGALASR  174 (176)
Q Consensus       149 ~~~D~~~~~~~~~~r~~E~v~~l~~~  174 (176)
                      +...+.|+. .+++-..+=+..|.++
T Consensus        83 ~~~~~~l~a-~s~~e~~~Wi~ai~~~  107 (109)
T 2i5f_A           83 DEVHYFLQA-ATPKERTEWIKAIQMA  107 (109)
T ss_dssp             TCCEEEEEC-SSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEc-CCHHHHHHHHHHHHHH
Confidence            766677765 2323334555555544

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=91.35  E-value=1.6  Score=29.62  Aligned_cols=77  Identities=12%  Similarity=0.034  Sum_probs=49.9

Q ss_pred             ceeEEEEEEEEEecCC-ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEe--c-CCCCcEEEEEeCCCCcEEE
Q psy5801          80 DRVMFSAFVHKTNKFN-RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSV--S-PGSDQLVVIHNNKGNDLVF  155 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~~-K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsv--S-~~~d~~~vih~~~~~D~~~  155 (176)
                      ..++.+..+.|-.... .=+.|.|++++..|+-+......+. +..|+|...+.+..  . ......|.|..++..-+.|
T Consensus         3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l   81 (113)
T 1pls_A            3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSP-KGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFF   81 (113)
T ss_dssp             CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSC-SEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEE
T ss_pred             CCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCCCCc-ceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEE
Confidence            3455666676654332 3578999999999988865432333 55599999876642  1 2333477787776556777


Q ss_pred             Ee
Q psy5801         156 TI  157 (176)
Q Consensus       156 ~~  157 (176)
                      +.
T Consensus        82 ~a   83 (113)
T 1pls_A           82 QA   83 (113)
T ss_dssp             EC
T ss_pred             EC
Confidence            65

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=89.56  E-value=3.4  Score=27.82  Aligned_cols=93  Identities=15%  Similarity=0.143  Sum_probs=57.7

Q ss_pred             CceeEEEEEEEEEecCC-ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCC----CCcEEEEEeC-----
Q psy5801          79 EDRVMFSAFVHKTNKFN-RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG----SDQLVVIHNN-----  148 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~-K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~----~d~~~vih~~-----  148 (176)
                      .+.++.+..+.|-.... .=+.|.|++++..|+-+...+..+. +..|+|...+-+.+.+.    ....|.|..+     
T Consensus         5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~   83 (118)
T 1v89_A            5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKP-QGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQN   83 (118)
T ss_dssp             SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCSC-SEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSC
T ss_pred             CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCCCCc-eEEEECCCCEEEEcCcCcccCCcceEEEECCccccc
Confidence            45667777777765433 4578999999999988864432333 55599998876666532    2335666664     


Q ss_pred             --CCCcEEEEeccCCCchhhhHHHHHh
Q psy5801         149 --KGNDLVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       149 --~~~D~~~~~~~~~~r~~E~v~~l~~  173 (176)
                        ++.-+.|+. .+++-..+=+..|.+
T Consensus        84 ~~~~~~~~l~a-~s~~e~~~Wi~al~~  109 (118)
T 1v89_A           84 RMGQDSYVLMA-SSQAEMEEWVKFLRR  109 (118)
T ss_dssp             CSSCCCEEEEC-SSHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEEC-CCHHHHHHHHHHHHH
Confidence              456677765 222233444555544

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.72  E-value=3  Score=28.81  Aligned_cols=76  Identities=7%  Similarity=0.065  Sum_probs=49.8

Q ss_pred             ceeEEEEEEEEEecC---CceeeeEEEEecc--eEEEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcEE
Q psy5801          80 DRVMFSAFVHKTNKF---NRCADRALLVTDF--AVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLV  154 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~---~K~~~R~llvTd~--~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~~  154 (176)
                      +...++....|-...   ..=+.|.|++++.  .|+-+......+. +-.|+|..+..+.......+.|.|+.+ +..+.
T Consensus         6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~-~g~I~L~~~~~~~~~~~~~~~F~i~~~-~r~~~   83 (119)
T 2dhk_A            6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANP-LDSIDLSSAVFDCKADAEEGIFEIKTP-SRVIT   83 (119)
T ss_dssp             SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSC-SEEEEGGGCEEEECTTGGGCEEEEECS-SCCEE
T ss_pred             CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCccc-ccEEECCCCEEEecCCCCCCEEEEEeC-CcEEE
Confidence            344455566665431   1347899999998  8877764332333 555999998776654455567888887 56777


Q ss_pred             EEe
Q psy5801         155 FTI  157 (176)
Q Consensus       155 ~~~  157 (176)
                      |+.
T Consensus        84 l~a   86 (119)
T 2dhk_A           84 LKA   86 (119)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            775

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1

Probab=88.50  E-value=4.4  Score=27.68  Aligned_cols=92  Identities=13%  Similarity=0.166  Sum_probs=56.7

Q ss_pred             CceeEEEEEEEEEecCC-ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecC-----CCCcEEEEEeCCCCc
Q psy5801          79 EDRVMFSAFVHKTNKFN-RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP-----GSDQLVVIHNNKGND  152 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~-K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~-----~~d~~~vih~~~~~D  152 (176)
                      .+.++.+..+.|-.... .=+.|.|++++..|+-+...+..+. +..|+|..+..+...+     .....|.|..+ +..
T Consensus        11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~-~r~   88 (125)
T 1eaz_A           11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEP-LRVIPLKEVHKVQECKQSDIMMRDNLFEIVTT-SRT   88 (125)
T ss_dssp             -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCSSC-SEEEEGGGCCEEEECTTHHHHTCSSEEEEECS-SCE
T ss_pred             CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCCCcc-eeEEEcccceEEeeccccccCCcCCEEEEEeC-CcE
Confidence            34455666666654432 3578999999999988864432333 5569999998887632     34566777765 456


Q ss_pred             EEEEeccCCCchhhhHHHHHh
Q psy5801         153 LVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       153 ~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      +.|+. .+++-..+=+..|.+
T Consensus        89 ~~l~a-~s~~e~~~W~~al~~  108 (125)
T 1eaz_A           89 FYVQA-DSPEEMHSWIKAVSG  108 (125)
T ss_dssp             EEEEC-SSHHHHHHHHHHHHH
T ss_pred             EEEEc-CCHHHHHHHHHHHHH
Confidence            77765 222223444444443

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A

Probab=88.16  E-value=5.6  Score=28.43  Aligned_cols=93  Identities=16%  Similarity=0.082  Sum_probs=57.3

Q ss_pred             ceeEEEEEEEEEecCC-----ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEec-----CCCCcEEEEEeCC
Q psy5801          80 DRVMFSAFVHKTNKFN-----RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVS-----PGSDQLVVIHNNK  149 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~~-----K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS-----~~~d~~~vih~~~  149 (176)
                      +.++.+..+.|-....     .=+.|.|++++..|+-+......+. +..|+|...+-+.+.     ......|.|..++
T Consensus        15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~-~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~   93 (148)
T 1u5f_A           15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQ-KGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD   93 (148)
T ss_dssp             SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSC-SEEEECTTCEEEECTTSCSSTTGGGEEEEECTT
T ss_pred             CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCccc-ceEEEcCCcEEEECCCcccCCCCccEEEEECCC
Confidence            4566777777765432     3578999999999988865432333 556999988644332     1223577888877


Q ss_pred             CCcEEEEeccCCCchhhhHHHHHhh
Q psy5801         150 GNDLVFTIISSEDRVGELVGALASR  174 (176)
Q Consensus       150 ~~D~~~~~~~~~~r~~E~v~~l~~~  174 (176)
                      ..-+.|+. .+.+-..+=+..|.++
T Consensus        94 ~r~~~l~a-~s~~e~~~Wi~al~~~  117 (148)
T 1u5f_A           94 KRIYQFTA-ASPKDAEEWVQQLKFI  117 (148)
T ss_dssp             SCEEEEEC-SSHHHHHHHHHHHHHH
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHHHH
Confidence            66787776 2222334445555443

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.56  E-value=4.9  Score=27.10  Aligned_cols=94  Identities=11%  Similarity=0.162  Sum_probs=56.6

Q ss_pred             CceeEEEEEEEEEec--CCceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecC----CCCcEEEEEeCCCCc
Q psy5801          79 EDRVMFSAFVHKTNK--FNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP----GSDQLVVIHNNKGND  152 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr--~~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~----~~d~~~vih~~~~~D  152 (176)
                      .+.++.+..+.|-..  ...=+.|.|++++..|+-+...+..+. +..|+|..++-..+.+    .....|.|..+++..
T Consensus         8 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~   86 (117)
T 2d9y_A            8 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESI-LGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRT   86 (117)
T ss_dssp             SCCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTCCSC-CEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCE
T ss_pred             CCCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCCCCc-CCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcE
Confidence            445667777777652  234589999999999988864432333 5569999876333322    122356665566677


Q ss_pred             EEEEeccCCCchhhhHHHHHhh
Q psy5801         153 LVFTIISSEDRVGELVGALASR  174 (176)
Q Consensus       153 ~~~~~~~~~~r~~E~v~~l~~~  174 (176)
                      +.|+. .+++-..+=+..|.++
T Consensus        87 ~~l~a-~s~~e~~~Wi~al~~~  107 (117)
T 2d9y_A           87 YFFSA-ESPEEQEAWIQAMGEA  107 (117)
T ss_dssp             EEEEC-SSHHHHHHHHHHHHHT
T ss_pred             EEEEc-CCHHHHHHHHHHHHHH
Confidence            88876 2323334555555443

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}

Probab=86.86  E-value=5.8  Score=27.24  Aligned_cols=93  Identities=8%  Similarity=0.093  Sum_probs=56.0

Q ss_pred             CceeEEEEEEEEEec--CCceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecC----CCCcEEEEEeCCCCc
Q psy5801          79 EDRVMFSAFVHKTNK--FNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP----GSDQLVVIHNNKGND  152 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr--~~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~----~~d~~~vih~~~~~D  152 (176)
                      ...++.+..+.|-..  ...=+.|.|++++..|+-+......+. +..|+|...+-..+.+    .....|.|..+++..
T Consensus        18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~   96 (128)
T 2dkp_A           18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGI-LGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRT   96 (128)
T ss_dssp             TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSE-EEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCC
T ss_pred             CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCCccc-ceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCE
Confidence            445566667766654  224578999999999988865432334 5569998764333321    233467777777678


Q ss_pred             EEEEeccCCCchhhhHHHHHh
Q psy5801         153 LVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       153 ~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      +.|+. .+++-..+=+..|.+
T Consensus        97 ~~l~a-~s~~e~~~Wi~al~~  116 (128)
T 2dkp_A           97 YYFCT-DTGKEMELWMKAMLD  116 (128)
T ss_dssp             EEEEC-SSHHHHHHHHHHHHH
T ss_pred             EEEEc-CCHHHHHHHHHHHHH
Confidence            88876 222333444444443

>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}

Probab=86.38  E-value=4.9  Score=33.69  Aligned_cols=92  Identities=15%  Similarity=0.244  Sum_probs=63.8

Q ss_pred             ceeEEEEEEEEEecC-----------CceeeeEEEEecce-----E--EEec--CCccceeeeeeeeccceeeEEecCCC
Q psy5801          80 DRVMFSAFVHKTNKF-----------NRCADRALLVTDFA-----V--YKLD--SGAKFKAMKRGMSLQEMTGLSVSPGS  139 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~-----------~K~~~R~llvTd~~-----l--y~ld--~~k~~k~~k~~i~l~~i~~vsvS~~~  139 (176)
                      |..+=-..|.++...           .+.++|+|+|+-..     +  ++..  ....|++ ++--+|.|+.+|.--...
T Consensus       106 ErYITHVrV~Eds~~ps~pPp~~s~~kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsI-GKTW~L~ELk~Id~~~~~  184 (320)
T 3a58_A          106 NNYITHVRIIEDSKFPSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQI-GRTWQLTELVRVEKDLEI  184 (320)
T ss_dssp             CEEEEEEEEEEESSSTTSCCCTTCCGGGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEE-EEEEEGGGCCEEEECSSC
T ss_pred             ceEEEEEEEEecccCCCCCCCcccCccccCceEEEEEEecCCCceEEEEEEEecCCCceEe-cceechhhhhhhhcccCC
Confidence            666777778887665           57889999987665     4  3332  1123787 445999999999954455


Q ss_pred             CcEEEEEeCCCCcEEEEeccCCCchhhhHHHHHhhc
Q psy5801         140 DQLVVIHNNKGNDLVFTIISSEDRVGELVGALASRY  175 (176)
Q Consensus       140 d~~~vih~~~~~D~~~~~~~~~~r~~E~v~~l~~~~  175 (176)
                      +.-|+|++  +-+|..+.....|| .-|+..|.+.|
T Consensus       185 ~~gF~LTl--~K~YyW~A~s~kER-~~FI~sLvKiy  217 (320)
T 3a58_A          185 SEGFILTM--SKKYYWETNSAKER-TVFIKSLITLY  217 (320)
T ss_dssp             TTEEEEES--SSEEEEEESSHHHH-HHHHHHHHHHH
T ss_pred             CCceEEEe--CCceEEecCCHHHH-HHHHHHHHHHH
Confidence            56779999  56787766333345 44888888876

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1

Probab=85.54  E-value=6.3  Score=26.39  Aligned_cols=92  Identities=10%  Similarity=0.117  Sum_probs=54.0

Q ss_pred             ceeEEEEEEEEEecC-CceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCC--CcEEEEEeCCCCcEEEE
Q psy5801          80 DRVMFSAFVHKTNKF-NRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGS--DQLVVIHNNKGNDLVFT  156 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~-~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~--d~~~vih~~~~~D~~~~  156 (176)
                      +.+.++....|--.. ..=+.|.|++++..||-+......+. +..|||...+.+...+..  ...|-|..++..-+.|+
T Consensus         6 ~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~~~~-~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~   84 (109)
T 1wgq_A            6 SGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAA-LESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFK   84 (109)
T ss_dssp             CSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSC-SEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEE
T ss_pred             CCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCcCcc-CceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEE
Confidence            344455556654332 24578999999999988864432334 555999998877765432  24566665654456776


Q ss_pred             eccCCCchhhhHHHHHh
Q psy5801         157 IISSEDRVGELVGALAS  173 (176)
Q Consensus       157 ~~~~~~r~~E~v~~l~~  173 (176)
                      . .+++-..+=+..|.+
T Consensus        85 a-~s~~e~~~Wi~al~~  100 (109)
T 1wgq_A           85 A-DDAHSTQRWIDAFQE  100 (109)
T ss_dssp             C-SSHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHH
Confidence            5 222223444444443

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}

Probab=83.66  E-value=11  Score=27.74  Aligned_cols=94  Identities=12%  Similarity=0.122  Sum_probs=55.7

Q ss_pred             CceeEEEEEEEEEecCCc------eeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCC--------CcEEE
Q psy5801          79 EDRVMFSAFVHKTNKFNR------CADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGS--------DQLVV  144 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~K------~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~--------d~~~v  144 (176)
                      +..++......|=-+..|      =+.|.|++++..|+=++.....+..+-.|+|..+..+...+..        ...|.
T Consensus        12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~   91 (164)
T 2lul_A           12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQ   91 (164)
T ss_dssp             CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEE
T ss_pred             CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEE
Confidence            556677777776443222      2689999999999767543212222445999999888664322        23455


Q ss_pred             EEeCCCCcEEEEeccCCCchhhhHHHHHhh
Q psy5801         145 IHNNKGNDLVFTIISSEDRVGELVGALASR  174 (176)
Q Consensus       145 ih~~~~~D~~~~~~~~~~r~~E~v~~l~~~  174 (176)
                      |..|+ .-+.|+. ++++-..|=+..|.+.
T Consensus        92 i~t~~-rt~~l~A-~s~~e~~~Wi~aL~~~  119 (164)
T 2lul_A           92 VVHDA-NTLYIFA-PSPQSRDLWVKKLKEE  119 (164)
T ss_dssp             EECSS-CEEEEEC-SSHHHHHHHHHHHHHH
T ss_pred             EecCC-cEEEEEC-CCHHHHHHHHHHHHHH
Confidence            55554 4555554 3333346666666654

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A

Probab=83.42  E-value=11  Score=29.12  Aligned_cols=93  Identities=16%  Similarity=0.065  Sum_probs=60.4

Q ss_pred             CceeEEEEEEEEEecC-----CceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEec-----CCCCcEEEEEeC
Q psy5801          79 EDRVMFSAFVHKTNKF-----NRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVS-----PGSDQLVVIHNN  148 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~-----~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS-----~~~d~~~vih~~  148 (176)
                      -..++.+....|-...     ..=+.|.|++++..|+-+...+..+. +..|+|..++.+...     ......|.|..|
T Consensus       103 l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~p-~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~  181 (211)
T 1u5e_A          103 LPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQ-KGEFAIDGYDVRMNNTLRKDGKKDCCFEICAP  181 (211)
T ss_dssp             CSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSC-SEEEECTTCEEEECGGGCSSTTGGGEEEEECS
T ss_pred             cCCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCccc-eEEEEeCCcEEEEcCCccccCCCCCEEEEEcC
Confidence            3567888888887652     24578999999999988865432333 556999999887642     222457788888


Q ss_pred             CCCcEEEEeccCCCchhhhHHHHHh
Q psy5801         149 KGNDLVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       149 ~~~D~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      +..-+.|+. .+.+-..+-+..|.+
T Consensus       182 ~~r~~~l~A-~s~~e~~~Wi~aL~~  205 (211)
T 1u5e_A          182 DKRIYQFTA-ASPKDAEEWVQQLKF  205 (211)
T ss_dssp             SSCEEEEEC-SSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEc-CCHHHHHHHHHHHHH
Confidence            767788876 222223444444443

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.15  E-value=6.3  Score=27.05  Aligned_cols=92  Identities=10%  Similarity=0.096  Sum_probs=53.8

Q ss_pred             CceeEEEEEEEEEecC-CceeeeEEEEe--cceEEEecCCcc--ceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcE
Q psy5801          79 EDRVMFSAFVHKTNKF-NRCADRALLVT--DFAVYKLDSGAK--FKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDL  153 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~-~K~~~R~llvT--d~~ly~ld~~k~--~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~  153 (176)
                      .+.+.++....|--.. ..=+.|.|+++  +..|+-+.....  .+. +-.|+|...+ |.........|.|..|+..-+
T Consensus         5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~-~g~I~L~~~~-v~~~~~~~~~F~i~~~~~r~~   82 (120)
T 2d9x_A            5 SSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKP-RGTLQLAGAV-ISPSDEDSHTFTVNAASGEQY   82 (120)
T ss_dssp             CSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCC-SEEEECTTCC-EECCSSSSSCEEECCSSSCCE
T ss_pred             CCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcccCCCc-cceEEcceEE-EEecCCCCCEEEEEcCCCCEE
Confidence            3445566666665433 34688999998  467766643221  233 5559999875 655555556677777765677


Q ss_pred             EEEeccCCCchhhhHHHHHh
Q psy5801         154 VFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       154 ~~~~~~~~~r~~E~v~~l~~  173 (176)
                      .|+. .+++-..+=+..|.+
T Consensus        83 ~l~a-~s~~e~~~Wi~al~~  101 (120)
T 2d9x_A           83 KLRA-TDAKERQHWVSRLQI  101 (120)
T ss_dssp             EECC-SSHHHHHHHHHHHHH
T ss_pred             EEEC-CCHHHHHHHHHHHHH
Confidence            7765 222223444444443

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}

Probab=82.73  E-value=15  Score=28.60  Aligned_cols=94  Identities=9%  Similarity=0.133  Sum_probs=60.6

Q ss_pred             cCCceeEEEEEEEEEecC------CceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCC
Q psy5801          77 SSEDRVMFSAFVHKTNKF------NRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKG  150 (176)
Q Consensus        77 ~~~~~ilfs~~V~K~nr~------~K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~  150 (176)
                      ...+.++.+....|--..      ..=+.|.|++++..|+-+...+..+. +..|+|..++.+.-....+..|.|..+ +
T Consensus        53 ~~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~~~~-~g~I~L~~~~~v~~~~~k~~~F~I~t~-~  130 (228)
T 3tfm_A           53 RSKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKL-KGTVEVRSAKEIIDNTNKENGIDIIMA-D  130 (228)
T ss_dssp             SSCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTCCSE-EEEEEGGGCSEEEEETTTTSEEEEECS-S
T ss_pred             ccCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCCcce-eEEEEcCCCEEeccCCCCCcEEEEEcC-C
Confidence            445666677777775542      23478999999999987765442334 566999999887766666667777665 4


Q ss_pred             CcEEEEeccCCCchhhhHHHHHh
Q psy5801         151 NDLVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       151 ~D~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      .-+.|+. .+++-..+=+..|.+
T Consensus       131 r~~~l~A-~s~~e~~~Wv~aL~~  152 (228)
T 3tfm_A          131 RTFHLIA-ESPEDASQWFSVLSQ  152 (228)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHH
T ss_pred             cEEEEEc-CCHHHHHHHHHHHHH
Confidence            5677765 222233444444443

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=82.45  E-value=9.7  Score=26.14  Aligned_cols=94  Identities=13%  Similarity=0.146  Sum_probs=56.1

Q ss_pred             CceeEEEEEEEEEecCC-ceeeeEEEEec--ceEEEecCC-ccceeeeeeeeccceeeEEecCC----------CCcEEE
Q psy5801          79 EDRVMFSAFVHKTNKFN-RCADRALLVTD--FAVYKLDSG-AKFKAMKRGMSLQEMTGLSVSPG----------SDQLVV  144 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~-K~~~R~llvTd--~~ly~ld~~-k~~k~~k~~i~l~~i~~vsvS~~----------~d~~~v  144 (176)
                      .+.++.+..+.|-.... .=+.|.|++++  ..|+-++.. ...+. +..|+|...+-..+...          ....|.
T Consensus        15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~-~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~   93 (129)
T 1x1g_A           15 SGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRP-VGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFK   93 (129)
T ss_dssp             CSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSC-SCCEESTTCCCEECCSSSSCSSCSSCCCSSCEE
T ss_pred             CCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCCcc-ceEEECcCCEEEEeCCCCCcccccCCCCCceEE
Confidence            45667777777765433 45789999993  567666543 22333 55589987544444433          345677


Q ss_pred             EEeCCCCcEEEEeccCCCchhhhHHHHHhh
Q psy5801         145 IHNNKGNDLVFTIISSEDRVGELVGALASR  174 (176)
Q Consensus       145 ih~~~~~D~~~~~~~~~~r~~E~v~~l~~~  174 (176)
                      |..|+..-+.|+. .+++-..+=+..|.++
T Consensus        94 I~~~~~r~~~l~a-~s~~e~~~Wi~al~~~  122 (129)
T 1x1g_A           94 VITKDDTHYYIQA-SSKAERAEWIEAIKKL  122 (129)
T ss_dssp             ECCTTCCCEEECC-SSHHHHHHHHHHHHHH
T ss_pred             EEcCCCCEEEEEc-CCHHHHHHHHHHHHHH
Confidence            8777656677765 2323334555555543

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1

Probab=81.32  E-value=10  Score=25.58  Aligned_cols=69  Identities=13%  Similarity=0.192  Sum_probs=44.1

Q ss_pred             ceeEEEecC--CCceeeeEEEEecCeEEEeccccccceeEeeeeccceeeEEeecCCCceEEEEcCCCCceEEEE
Q psy5801           3 SAFVHKTNK--FNRCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTI   75 (176)
Q Consensus         3 s~~V~K~nr--~~K~~~R~lllT~~~iy~ld~~~~~k~~kr~i~l~~i~~vsvS~~~d~~~vih~~~~~Dl~~~~   75 (176)
                      +..+.|-.+  ...-+.|.++|++..++--..+...+ .+..|+|..+..|....  +..|.|+.+ +..+.++.
T Consensus        11 ~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~-~~g~i~l~~~~~v~~~~--~~~F~i~~~-~r~~~l~a   81 (115)
T 2cod_A           11 SGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMY-SKGIIPLSAISTVRVQG--DNKFEVVTT-QRTFVFRV   81 (115)
T ss_dssp             EEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSS-CCCEEETTTEEEEEEET--TTEEEEEES-SCCEEEEC
T ss_pred             EEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCcc-cCCEEECCcceEEEeCC--CCEEEEEeC-CcEEEEEC
Confidence            445566544  22567999999999987775433123 35569999987666554  556677654 45566554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	176
d2coda1	102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	92.01
d1omwa2	119	G-protein coupled receptor kinase 2 (beta-adrenerg	91.61
d1wgqa_	109	FYVE, RhoGEF and PH domain containing protein 6, F	91.53
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	90.98
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	90.93
d1plsa_	113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	89.8
d1v61a_	132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	89.46
d1zc3b1	109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	86.37
d1faoa_	100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	85.54
d1v5ua_	117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	85.34
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	84.48
d2dfka2	162	Rho guanine nucleotide exchange factor 9, Collybis	83.09
d2fjla1	101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	82.96
d1u5fa1	111	Src-associated adaptor protein Skap2 {Mouse (Mus m	80.95

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Centaurin-delta 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.01  E-value=0.88  Score=28.96  Aligned_cols=82  Identities=13%  Similarity=0.265  Sum_probs=52.3

Q ss_pred             EEEEEecCC-c-eeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCCCcEEEEEeCCCCcEEEEeccCCCch
Q psy5801          87 FVHKTNKFN-R-CADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQLVVIHNNKGNDLVFTIISSEDRV  164 (176)
Q Consensus        87 ~V~K~nr~~-K-~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~~~vih~~~~~D~~~~~~~~~~r~  164 (176)
                      ...|-...+ + =+.|.+++++..|+-....+.... +..|||.++..+...  .++.|.|+.|+ ..+.|+. .+++-.
T Consensus         6 ~L~K~~~~~~~~W~kr~fvL~~~~L~~~~~~~~~~~-~~~i~L~~~~~~~~~--~~~~f~i~~~~-~~~~l~a-~s~~e~   80 (102)
T d2coda1           6 WLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYS-KGIIPLSAISTVRVQ--GDNKFEVVTTQ-RTFVFRV-EKEEER   80 (102)
T ss_dssp             EEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSC-CCEEETTTEEEEEEE--TTTEEEEEESS-CCEEEEC-SSHHHH
T ss_pred             EEEEECCCCCCCceEEEEEEECCEEEEEeccCccee-EEEEEchhceeeccc--cceeEEEEcCC-cEEEEEe-CCHHHH
Confidence            344554433 2 279999999999988865443444 555999998777664  45678889886 4677775 232333


Q ss_pred             hhhHHHHHh
Q psy5801         165 GELVGALAS  173 (176)
Q Consensus       165 ~E~v~~l~~  173 (176)
                      .+-+.+|.+
T Consensus        81 ~~Wi~ai~~   89 (102)
T d2coda1          81 NDWISILLN   89 (102)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            444444443

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.61  E-value=0.89  Score=29.81  Aligned_cols=90  Identities=10%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             CceeEEEEEEEEEecCCce--eeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCCCCc--EEEEEeCCCCcEE
Q psy5801          79 EDRVMFSAFVHKTNKFNRC--ADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGSDQ--LVVIHNNKGNDLV  154 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~K~--~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~d~--~~vih~~~~~D~~  154 (176)
                      ..++++.....|-...++.  +.|.|++++..|+-+....  . .+..|++..+..+..++....  |++++ +++.-+.
T Consensus         7 ~~~~i~eG~L~K~g~~~~~~WkkR~fvL~~~~L~yy~~~~--~-~~~~i~l~~~~~v~~~~~~~~~~f~i~~-~~~~~~~   82 (119)
T d1omwa2           7 GKDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGE--A-PQSLLTMEEIQSVEETQIKERKCLLLKI-RGGKQFV   82 (119)
T ss_dssp             TSCCCEEEEEEECC------CEEEEEEEETTEEEEECTTS--C-CCEEEEGGGEEEEEEEESSSCEEEEEEE-TTSCEEE
T ss_pred             CCCeEEEEEEEEECCCCCCCeEEEEEEEEcCeEEEEeccc--c-cCccceeccccccccccccccceEEEEc-CCCcEEE
Confidence            4556777788886544433  8999999999998776433  1 144589999988877654333  44444 4445677


Q ss_pred             EEeccCCCchhhhHHHHHh
Q psy5801         155 FTIISSEDRVGELVGALAS  173 (176)
Q Consensus       155 ~~~~~~~~r~~E~v~~l~~  173 (176)
                      |+. .+++-..+=+..|.+
T Consensus        83 f~a-~s~~e~~~W~~al~~  100 (119)
T d1omwa2          83 LQC-DSDPELVQWKKELRD  100 (119)
T ss_dssp             EEC-SSHHHHHHHHHHHHH
T ss_pred             EEC-CCHHHHHHHHHHHHH
Confidence            776 332333444444443

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.53  E-value=0.72  Score=29.55  Aligned_cols=92  Identities=10%  Similarity=0.128  Sum_probs=54.7

Q ss_pred             ceeEEEEEEEEEecCCc-eeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCC--CCcEEEEEeCCCCcEEEE
Q psy5801          80 DRVMFSAFVHKTNKFNR-CADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG--SDQLVVIHNNKGNDLVFT  156 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~~K-~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~--~d~~~vih~~~~~D~~~~  156 (176)
                      +..+.+..+.|.....+ =+.|.+++.+..||-+...+..+. +..|+|....-....+.  ..+.|.|..++..-++|+
T Consensus         6 ~~~~~~G~L~k~~~~~~~W~kr~~vL~~~~L~~~k~~~~~~~-~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~f~   84 (109)
T d1wgqa_           6 SGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAA-LESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFK   84 (109)
T ss_dssp             CSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSC-SEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEE
T ss_pred             CCCcEEEEEEEECCCCCCceEEEEEEeCCEEEEecccccccc-ccccccceeeeeecccccccceeeeeecccceEEEEE
Confidence            34445556666655544 489999999999988854432333 55588888765555433  334566666654456666


Q ss_pred             eccCCCchhhhHHHHHh
Q psy5801         157 IISSEDRVGELVGALAS  173 (176)
Q Consensus       157 ~~~~~~r~~E~v~~l~~  173 (176)
                      + .+++-..+=+..|..
T Consensus        85 a-~s~~~~~~Wi~ai~~  100 (109)
T d1wgqa_          85 A-DDAHSTQRWIDAFQE  100 (109)
T ss_dssp             C-SSHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHH
Confidence            5 232333444444443

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.98  E-value=1.2  Score=28.46  Aligned_cols=77  Identities=14%  Similarity=0.081  Sum_probs=53.4

Q ss_pred             ceeEEEEEEEEEecCC-----ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecC-----CCCcEEEEEeCC
Q psy5801          80 DRVMFSAFVHKTNKFN-----RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSP-----GSDQLVVIHNNK  149 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~~-----K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~-----~~d~~~vih~~~  149 (176)
                      ..++-+....|..+..     +=+.|.+++++..++-+...+..+. +-.+||..+..+....     ..+..|.|..++
T Consensus         7 ~~v~k~G~L~k~~~~~~~~~~~W~~r~~vL~~~~L~~y~~~~~~~p-~g~i~L~~~~~~~~~~~~~~~~~~~~f~i~~~~   85 (111)
T d1u5fa1           7 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQ-KGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD   85 (111)
T ss_dssp             SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSC-SEEEECTTCEEEECTTSCSSTTGGGEEEEECTT
T ss_pred             CCeeEEEEEEEECCCCCCCcCCceEEEEEEECCEEEeeccccccCc-ceEEEecccEEEeeccccccccccceEEEEccC
Confidence            3455566666665543     2288999999999998875543443 4559999887765532     234677888887


Q ss_pred             CCcEEEEe
Q psy5801         150 GNDLVFTI  157 (176)
Q Consensus       150 ~~D~~~~~  157 (176)
                      +..++|++
T Consensus        86 ~~~~~~~a   93 (111)
T d1u5fa1          86 KRIYQFTA   93 (111)
T ss_dssp             SCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77888886

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.93  E-value=0.75  Score=30.47  Aligned_cols=51  Identities=8%  Similarity=0.027  Sum_probs=33.9

Q ss_pred             EEEEEEecCCceeeeEEEEecc-eEEEecCCc-cceeeeeeeeccceeeEEec
Q psy5801          86 AFVHKTNKFNRCADRALLVTDF-AVYKLDSGA-KFKAMKRGMSLQEMTGLSVS  136 (176)
Q Consensus        86 ~~V~K~nr~~K~~~R~llvTd~-~ly~ld~~k-~~k~~k~~i~l~~i~~vsvS  136 (176)
                      +...|+.+.+++..|.|.++.. ...-..+.+ .....+..||+++|..|..-
T Consensus        15 ~~l~K~~~~~~~k~R~f~L~~d~~~i~~~~~~~~~~~~~~~i~i~~I~~V~~G   67 (119)
T d1maia_          15 SQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMG   67 (119)
T ss_dssp             EEEEEESSSSCEEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEES
T ss_pred             CeEEEeCCCCCCEEEEEEEcCCCCEEEEeCCCCCCCccceEEEHHHceEEEcC
Confidence            4678999888999999999754 333333221 11112455999999999773

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Pleckstrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.80  E-value=1.3  Score=28.38  Aligned_cols=75  Identities=12%  Similarity=0.025  Sum_probs=48.2

Q ss_pred             eEEEEEEEEEecCC-ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEec---CCCCcEEEEEeCCCCcEEEEe
Q psy5801          82 VMFSAFVHKTNKFN-RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVS---PGSDQLVVIHNNKGNDLVFTI  157 (176)
Q Consensus        82 ilfs~~V~K~nr~~-K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS---~~~d~~~vih~~~~~D~~~~~  157 (176)
                      ++-+..+.|-.... .=+.|.+++++..|+-+...+..+. +..|+|..+..+..+   +..+..|.+..++...+.|+.
T Consensus         5 ~ikeG~L~k~~~~~k~WkkryfvL~~~~L~~y~~~~~~~p-~~~i~l~~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~a   83 (113)
T d1plsa_           5 RIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSP-KGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQA   83 (113)
T ss_dssp             CSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSC-SEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEEC
T ss_pred             ceEEEEEEEeCCCCCCceEEEEEEECCEEEEEecCCcccc-ceEEECccCeEEeeecccCCcceEEEEecCCCeEEEEEC
Confidence            34445555543332 4578999999999988864443344 455999998777775   334445666666555677766

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rac/CDC42 GEF 6, alpha-pix
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.46  E-value=0.42  Score=32.66  Aligned_cols=94  Identities=16%  Similarity=0.174  Sum_probs=59.1

Q ss_pred             CceeEEEEEEEEEecCC-ceeeeEEEEecceEEEecCCc---cceeeeeeeeccceeeEEec--CCCCcEEEEEeCCCCc
Q psy5801          79 EDRVMFSAFVHKTNKFN-RCADRALLVTDFAVYKLDSGA---KFKAMKRGMSLQEMTGLSVS--PGSDQLVVIHNNKGND  152 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~-K~~~R~llvTd~~ly~ld~~k---~~k~~k~~i~l~~i~~vsvS--~~~d~~~vih~~~~~D  152 (176)
                      .+++++...+.+-...+ +.++|.|++-+..|.-..++.   .++. +..||+..+.-..+.  ......|.|.-|...-
T Consensus        25 ~G~li~~g~~~~~~~~~~~~k~R~~fLF~~~Ll~~k~~~~~~~~~~-k~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~  103 (132)
T d1v61a_          25 LGNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMY-QGKIPIAGMVVNRLDEIEGSDCMFEITGSTVER  103 (132)
T ss_dssp             TCCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEE-EEEECTTTCBCSTTCSSSSSCCCEEEECSSSCE
T ss_pred             ccCEEEEEEEEEEEecCCCcceEEEEEeCCEEEEEEEcCCCceeEE-eeecchhhccccccccccCccceEEEeCCCCCE
Confidence            34566666776665555 779999999999987665422   2544 777999998533221  1122346666665556


Q ss_pred             EEEEeccCCCchhhhHHHHHhh
Q psy5801         153 LVFTIISSEDRVGELVGALASR  174 (176)
Q Consensus       153 ~~~~~~~~~~r~~E~v~~l~~~  174 (176)
                      +++++ .+++-..+=+..|.++
T Consensus       104 ~~l~a-~s~eek~~Wv~~L~~~  124 (132)
T d1v61a_         104 IVVHC-NNNQDFQEWMEQLNRL  124 (132)
T ss_dssp             EEECC-CCSHHHHHHHHHHHHH
T ss_pred             EEEEc-CCHHHHHHHHHHHHHH
Confidence            77766 4445556666666654

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Exocyst complex protein EXO84
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.37  E-value=2.8  Score=26.90  Aligned_cols=93  Identities=9%  Similarity=0.120  Sum_probs=53.2

Q ss_pred             CceeEEEEEEEEEecCCce--eee-EEEEecceEEEe---cCCccceeeeeeeeccceeeEEe--cCCCCcEEEEEeCCC
Q psy5801          79 EDRVMFSAFVHKTNKFNRC--ADR-ALLVTDFAVYKL---DSGAKFKAMKRGMSLQEMTGLSV--SPGSDQLVVIHNNKG  150 (176)
Q Consensus        79 ~~~ilfs~~V~K~nr~~K~--~~R-~llvTd~~ly~l---d~~k~~k~~k~~i~l~~i~~vsv--S~~~d~~~vih~~~~  150 (176)
                      ++.++....+.+++..+.+  ++| +|+.+|.-|+--   +....++. +..+||.++.=..+  +....+.|-|..+++
T Consensus         1 GR~li~eG~l~~~~~~~~k~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~-~~~~~l~~~~v~~~~d~~~~~n~f~i~~~~~   79 (109)
T d1zc3b1           1 GQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRY-NALYPLDRLAVVNVKDNPPMKDMFKLLMFPE   79 (109)
T ss_dssp             CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEE-EEEEETTTCEEEEECCBTTBSSEEEEEETTE
T ss_pred             CCEEEEeeeEEEEccCCCCcceeEEEEEecCEEEEEEEcCCcceEEEe-eeEEeccceEEEEeecccccceEEEEccCCC
Confidence            3567778889999998733  454 555555544322   11123554 77799999755444  233335667777654


Q ss_pred             CcEEEEeccCCCchhhhHHHHHhh
Q psy5801         151 NDLVFTIISSEDRVGELVGALASR  174 (176)
Q Consensus       151 ~D~~~~~~~~~~r~~E~v~~l~~~  174 (176)
                       =+++++ .+.+-+.+-+..|.++
T Consensus        80 -~~~~~a-~s~~eK~~W~~~l~~a  101 (109)
T d1zc3b1          80 -SRIFQA-ENAKIKREWLEVLEET  101 (109)
T ss_dssp             -EEEEEC-SSHHHHHHHHHHHHHH
T ss_pred             -EEEEEE-CCHHHHHHHHHHHHHH
Confidence             466665 2323335555555543

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.54  E-value=1.8  Score=27.25  Aligned_cols=74  Identities=8%  Similarity=0.000  Sum_probs=47.1

Q ss_pred             eeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCC--CCcEEEEEeCCCCcEEEEeccCCCchhhhHHHHHh
Q psy5801          97 CADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG--SDQLVVIHNNKGNDLVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus        97 ~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~--~d~~~vih~~~~~D~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      =+.|.|++++..|+-+...+..+. +..|+|..+..+.....  ..+.|-|+.|+ ..+.|+. .+++-..+=+.+|.+
T Consensus        20 Wk~R~fvL~~~~L~yy~~~~~~~~-~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~-r~~~l~a-~s~~~~~~Wi~ai~~   95 (100)
T d1faoa_          20 WKTRWFTLHRNELKYFKDQMSPEP-IRILDLTECSAVQFDYSQERVNCFCLVFPF-RTFYLCA-KTGVEADEWIKILRW   95 (100)
T ss_dssp             EEEEEEEEETTEEEEESSTTCSSC-SEEEEGGGCCEEEEECSSSSSSEEEEEETT-EEEEEEC-SSHHHHHHHHHHHHH
T ss_pred             ceEEEEEEECCEEEEEeccCCccC-ceEEechheEEEEeccccccccccccccCC-eEEEEEe-CCHHHHHHHHHHHHH
Confidence            478999999999987764432333 45599999888777544  34467777775 3566665 232333444444443

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: SET binding factor 1, Sbf1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.34  E-value=2.3  Score=27.00  Aligned_cols=91  Identities=11%  Similarity=0.169  Sum_probs=53.5

Q ss_pred             ceeEEEEEEEEEecCCc-eeeeEEEEec--ceEEEecCCccceeeeeeeeccceeeEEecCCC---------CcEEEEEe
Q psy5801          80 DRVMFSAFVHKTNKFNR-CADRALLVTD--FAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPGS---------DQLVVIHN  147 (176)
Q Consensus        80 ~~ilfs~~V~K~nr~~K-~~~R~llvTd--~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~~---------d~~~vih~  147 (176)
                      ..+.++..+.|-....+ =+.|.+++..  ..||-.+..+.-+. +..|+|.++..+.+....         ..++.++.
T Consensus         6 s~~~~eG~L~k~~~~~k~WkkR~fvL~~~~~~L~~~~~~~~~~p-~g~i~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~   84 (117)
T d1v5ua_           6 SGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTEC-KGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT   84 (117)
T ss_dssp             CSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSC-CCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE
T ss_pred             CCCeEEEEEEEECCCCCCceEEEEEEeCCCCEEEecccccccCc-ceEEEecceEEEeecccccccccccccceEEEeeC
Confidence            34455666666544444 3889999954  45776654432333 556999999888875322         23666666


Q ss_pred             CCCCcEEEEeccCCCchhhhHHHHHh
Q psy5801         148 NKGNDLVFTIISSEDRVGELVGALAS  173 (176)
Q Consensus       148 ~~~~D~~~~~~~~~~r~~E~v~~l~~  173 (176)
                      ++ ..+.|+. ++++-..|=|..|.+
T Consensus        85 ~~-~~~~~~a-~s~~e~~~Wv~~l~~  108 (117)
T d1v5ua_          85 TR-RVYNFCA-QDVPSAQQWVDRIQS  108 (117)
T ss_dssp             SS-CEEEEEC-SSHHHHHHHHHHHHT
T ss_pred             CC-cEEEEEe-CCHHHHHHHHHHHHH
Confidence            64 5677776 333333455555543

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.48  E-value=2.3  Score=27.89  Aligned_cols=53  Identities=6%  Similarity=0.066  Sum_probs=35.4

Q ss_pred             eeEEEecCCCceeeeEEEEecCe--EEEeccccccceeEeeeeccceeeEEeecC
Q psy5801           4 AFVHKTNKFNRCADRALLVTDFA--VYKLDSGAKFKAMKRGMSLQEMTGLSVSPG   56 (176)
Q Consensus         4 ~~V~K~nr~~K~~~R~lllT~~~--iy~ld~~~~~k~~kr~i~l~~i~~vsvS~~   56 (176)
                      +...|+.++++...|.+.|+...  +|-=+++......+..||+++|..|-.-..
T Consensus        15 ~~l~K~~~~~~~k~R~f~L~~d~~~i~~~~~~~~~~~~~~~i~i~~I~~V~~G~~   69 (119)
T d1maia_          15 SQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHR   69 (119)
T ss_dssp             EEEEEESSSSCEEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSC
T ss_pred             CeEEEeCCCCCCEEEEEEEcCCCCEEEEeCCCCCCCccceEEEHHHceEEEcCCC
Confidence            56899999999999999998643  332222111112245699999998877543

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Rho guanine nucleotide exchange factor 9, Collybistin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.09  E-value=5.4  Score=27.44  Aligned_cols=94  Identities=9%  Similarity=0.119  Sum_probs=55.4

Q ss_pred             cCCceeEEEEEEEEEecC-CceeeeEEEEecceEEEecCC---c-cceeeeeeeeccceeeEEecC-----CCC---cEE
Q psy5801          77 SSEDRVMFSAFVHKTNKF-NRCADRALLVTDFAVYKLDSG---A-KFKAMKRGMSLQEMTGLSVSP-----GSD---QLV  143 (176)
Q Consensus        77 ~~~~~ilfs~~V~K~nr~-~K~~~R~llvTd~~ly~ld~~---k-~~k~~k~~i~l~~i~~vsvS~-----~~d---~~~  143 (176)
                      ...+..+....+.+.... ++.+.|.+++-+..|.-..+.   . .|.. +..++|+.+.-..+-.     .+.   +.|
T Consensus        22 ~~~r~Li~eG~L~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~y~~-k~~i~L~~~~v~~~~~~~~~~~~~~~~~~f  100 (162)
T d2dfka2          22 DRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYY-KGRIDMDKYEVIDIEDGRDDDFNVSMKNAF  100 (162)
T ss_dssp             GTCCCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEE-EEEEEGGGEEEEECCSEECSSSCCEESSEE
T ss_pred             ccCceEEEEEEEEEEEcCCCCceeEEEEEeCCeEEEEEecCCCCCceEE-ccccchhhceeeecccccccccCccccceE
Confidence            446788888888888764 578889888877777555321   1 2443 7779998875332211     111   246


Q ss_pred             EEEeCCCCc-EEEEeccCCCchhhhHHHHH
Q psy5801         144 VIHNNKGND-LVFTIISSEDRVGELVGALA  172 (176)
Q Consensus       144 vih~~~~~D-~~~~~~~~~~r~~E~v~~l~  172 (176)
                      .|+.++... ++|+. .+.+-+.+-+..|.
T Consensus       101 ~i~~~~~~~~~~~~A-~s~~eK~~W~~~l~  129 (162)
T d2dfka2         101 KLHNKETEEVHLFFA-KKLEEKIRWLRAFR  129 (162)
T ss_dssp             EEEESSSSCEEEEEC-SSHHHHHHHHHHHH
T ss_pred             EEEECCCCeEEEEEe-CCHHHHHHHHHHHH
Confidence            677665443 56665 23233355555554

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phosphoinositide phospholipase C, PLC-gamma-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.96  E-value=3.7  Score=25.52  Aligned_cols=77  Identities=9%  Similarity=0.033  Sum_probs=46.4

Q ss_pred             ceeeeEEEEecceEEEecCCccceeeeeeeeccceeeEEecCC---CCcEEEEEeCCCC--cEEEEeccCCCchhhhHHH
Q psy5801          96 RCADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG---SDQLVVIHNNKGN--DLVFTIISSEDRVGELVGA  170 (176)
Q Consensus        96 K~~~R~llvTd~~ly~ld~~k~~k~~k~~i~l~~i~~vsvS~~---~d~~~vih~~~~~--D~~~~~~~~~~r~~E~v~~  170 (176)
                      .=+.|.+++++..|+-++..+.... +..++|...+-......   ....|.|..|+..  -++|+. .+++-..|=+..
T Consensus        16 ~W~kR~fvL~~~~L~yy~~~~~~~~-~~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~a-~s~~e~~~Wi~a   93 (101)
T d2fjla1          16 EWYPHYFVLTSSKIYYSEETSSDLL-RGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAA-DSQEELQDWVKK   93 (101)
T ss_dssp             EEEEEEEEEETTEEEECCCCSCTCC-CEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEE-SSHHHHHHHHHH
T ss_pred             CCeEEEEEEECCEEEEEecccccee-cceEEcCCceeEeeeeecccccceeEEeccccccEEEEEEe-CCHHHHHHHHHH
Confidence            4679999999999988865443333 55688887655544322   2235677777643  377776 232333444555


Q ss_pred             HHhh
Q psy5801         171 LASR  174 (176)
Q Consensus       171 l~~~  174 (176)
                      |.++
T Consensus        94 i~~~   97 (101)
T d2fjla1          94 IREV   97 (101)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Src-associated adaptor protein Skap2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.95  E-value=4.7  Score=25.31  Aligned_cols=61  Identities=13%  Similarity=0.018  Sum_probs=40.7

Q ss_pred             eeeeEEEEecCeEEEeccccccceeEeeeeccceeeEEeecC-----CCceEEEEcCCCCceEEEEe
Q psy5801          15 CADRALLVTDFAVYKLDSGAKFKAMKRGMSLQEMTGLSVSPG-----SDQLVVIHNNKGNDLVFTII   76 (176)
Q Consensus        15 ~~~R~lllT~~~iy~ld~~~~~k~~kr~i~l~~i~~vsvS~~-----~d~~~vih~~~~~Dl~~~~~   76 (176)
                      =+.|.++|++..+|--+..+.... +-.|||..+..+.....     .+..|.|..+++..+++++.
T Consensus        29 W~~r~~vL~~~~L~~y~~~~~~~p-~g~i~L~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~   94 (111)
T d1u5fa1          29 WQKRWCALSKTVFYYYGSDKDKQQ-KGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAA   94 (111)
T ss_dssp             EEEEEEEEETTEEEEESSTTCSSC-SEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECS
T ss_pred             ceEEEEEEECCEEEeeccccccCc-ceEEEecccEEEeeccccccccccceEEEEccCCcEEEEEcC
Confidence            389999999999998865432222 34589888776554322     23566777776667777653