Psyllid ID: psy5895

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTANSATV
Secondary Structure (PSIPRED)
ccEEcccHHHHHHHcccccccccccccccEEEEEccccccccHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHcccccccccccccccccEEEEEEEccccHHHHHHHHHHcccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHccEEEccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccc
Coil and Loop (DISEMBL)
mhyvfgnhllardalplaaeggltpptptLRIAQRMRLEQTQIDGVVRKMQTDGEHcmllalpcgrtevdvVQQSAYLQSGFITYLQQKQAAGivniaapgtqqAAYIVHVFpscefannsLAQIDAQLLKKVSELTYLVIIIATTANSATV
Flexible Loop (DISEMBL)
MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTANSATV
Low Complexity Region (SEG)
MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTANSATV
Disordered region (IsUnstruct)
**YVFGNHLLARDALPLAAEGGL*****TLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATT******
Disordered Region (DISOPRED)
MHYVFGNHLLARD****************LRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALP****************SGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTANS***
Disordered Region (DISEMBL)
MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTANSATV
Disordered Region (DISPRO)
*****GNHLLARDALPLA*****TPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTAN****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTANSATV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q8SX83	5560	Protein split ends OS=Dro	yes	N/A	0.927	0.025	0.620	2e-48
Q96T58	3664	Msx2-interacting protein	yes	N/A	0.914	0.037	0.506	5e-37
Q62504	3644	Msx2-interacting protein	yes	N/A	0.914	0.038	0.5	2e-36
Q96T37	977	Putative RNA-binding prot	no	N/A	0.881	0.137	0.324	3e-11
Q6PHZ5	887	Putative RNA-binding prot	no	N/A	0.769	0.131	0.302	2e-08
Q8NDT2	890	Putative RNA-binding prot	no	N/A	0.763	0.130	0.3	3e-08

>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2

 Score =  191 bits (485), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 90/145 (62%), Positives = 110/145 (75%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+V GN  +AR +LP   E      TP LRIAQRMRLEQTQ++GV +KMQ D EHCMLL
Sbjct: 5419 MHFVHGNPNVARASLPSLVETN----TPLLRIAQRMRLEQTQLEGVAKKMQVDKEHCMLL 5474

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR   DV+Q S  LQ+GFITYLQQK AAGIVNI  PG++QAAY+VH+FPSC+FAN 
Sbjct: 5475 ALPCGRDHADVLQHSRNLQTGFITYLQQKMAAGIVNIPIPGSEQAAYVVHIFPSCDFANE 5534

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            +L +    L  +V+EL +L+I+IAT
Sbjct: 5535 NLERAAPDLKNRVAELAHLLIVIAT 5559

Probable corepressor protein, which regulates different key pathways such as the EGF receptor and Wg pathways. Involved in neuronal cell fate, survival and axon guidance, cell cycle regulation and repression of head identity in the embryonic trunk. May act with the Hox gene Deformed and the EGF receptor signaling pathway. Positive regulator of the Wg pathway in larval tissues but not in embryonic tissues. May act as a transcriptional corepressor protein, which repress transcription via the recruitment of large complexes containing histone deacetylase proteins.
Drosophila melanogaster (taxid: 7227)

>sp|Q96T58|MINT_HUMAN Msx2-interacting protein OS=Homo sapiens GN=SPEN PE=1 SV=1

 Score =  152 bits (385), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 74/146 (50%), Positives = 109/146 (74%), Gaps = 7/146 (4%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            +H+V GN++LA  +LPL+ EGG     P LRIAQRMRLE TQ++GV R+M  + ++C+LL
Sbjct: 3524 LHFVSGNNVLAHRSLPLS-EGG-----PPLRIAQRMRLEATQLEGVARRMTVETDYCLLL 3577

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct: 3578 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3637

Query: 121  SLAQIDAQLLKKVSELT-YLVIIIAT 145
             L+++   LL  +S ++ +L+I+IA+
Sbjct: 3638 HLSRLAPDLLASISNISPHLMIVIAS 3663

May serve as a nuclear matrix platform that organizes and integrates transcriptional responses. In osteoblasts, supports transcription activation: synergizes with RUNX2 to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE) (By similarity). Has also been shown to be an essential corepressor protein, which probably regulates different key pathways such as the Notch pathway. Negative regulator of the Notch pathway via its interaction with RBPSUH, which prevents the association between NOTCH1 and RBPSUH, and therefore suppresses the transactivation activity of Notch signaling. Blocks the differentiation of precursor B-cells into marginal zone B-cells. Probably represses transcription via the recruitment of large complexes containing histone deacetylase proteins. May bind both to DNA and RNA.

Homo sapiens (taxid: 9606)

>sp|Q62504|MINT_MOUSE Msx2-interacting protein OS=Mus musculus GN=Spen PE=1 SV=2

 Score =  150 bits (380), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 73/146 (50%), Positives = 109/146 (74%), Gaps = 7/146 (4%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            +H+V GN++LA  +LPL+ EGG     P LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct: 3504 LHFVSGNNVLAHRSLPLS-EGG-----PPLRIAQRMRLEASQLEGVARRMTVETDYCLLL 3557

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct: 3558 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3617

Query: 121  SLAQIDAQLLKKVSELT-YLVIIIAT 145
             L+++   LL  +S ++ +L+I+IA+
Sbjct: 3618 HLSRLAPDLLASISNISPHLMIVIAS 3643

May serve as a nuclear matrix platform that organizes and integrates transcriptional responses. In osteoblasts, supports transcription activation: synergizes with RUNX2 to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE). Has also been shown to be an essential corepressor protein, which probably regulates different key pathways, such as the Notch pathway. Negative regulator of the Notch pathway via its interaction with RBPSUH, which prevents the association between NOTCH1 and RBPSUH, and therefore suppresses the transactivation activity of Notch signaling. Blocks the differentiation of precursor B-cells into marginal zone B-cells. Probably represses transcription via the recruitment of large complexes containing histone deacetylase proteins. May bind both to DNA and RNA.

Mus musculus (taxid: 10090)

>sp|Q96T37|RBM15_HUMAN Putative RNA-binding protein 15 OS=Homo sapiens GN=RBM15 PE=1 SV=2

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 17/151 (11%)

Query: 8   HLLARD---ALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGE--HCMLLAL 62
           HLL  D   A  L  EG        L+I QR+RL+Q ++D V R+++  G   + +LLA+
Sbjct: 804 HLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAV 863

Query: 63  PCGRTEVDVVQQSAYLQS--------GFITYLQQKQAAGIVNIAAPGTQ--QAAYIVHVF 112
           P           +A   +          ++YL+QKQAAG++++   G +  +   ++H F
Sbjct: 864 PGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQAAGVISLPVGGNKDKENTGVLHAF 923

Query: 113 PSCEFANNSLAQIDAQLLKKVSELTYLVIII 143
           P CEF+   L      L K  SE  YLV+II
Sbjct: 924 PPCEFSQQFLDSPAKALAK--SEEDYLVMII 952

May be implicated in HOX gene regulation.

Homo sapiens (taxid: 9606)

>sp|Q6PHZ5|RB15B_MOUSE Putative RNA-binding protein 15B OS=Mus musculus GN=Rbm15b PE=1 SV=2

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 73/129 (56%), Gaps = 12/129 (9%)

Query: 30  LRIAQRMRLEQTQIDGVVRKMQ--TDGEHCMLLALPC-----GRTEVDVVQQSAY--LQS 80
           L+IAQR+RL+Q ++D V R+++  +   + +LLA+       G   + VV+      L  
Sbjct: 760 LKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLAIQSTPSGPGAEGMPVVEPGLQRRLLR 819

Query: 81  GFITYLQQKQAAGIVNIAAPGTQ--QAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTY 138
             ++YL+QKQAAG++++   G++      +++ FP C+F+   L Q   + L K+ E   
Sbjct: 820 NLVSYLKQKQAAGVISLPVGGSKGRDNTGMLYAFPPCDFSQQYL-QSALRTLGKLEEEHM 878

Query: 139 LVIIIATTA 147
           +++I+  TA
Sbjct: 879 VIVIVRDTA 887

May function in the regulation of alternative or illicit splicing.

Mus musculus (taxid: 10090)

>sp|Q8NDT2|RB15B_HUMAN Putative RNA-binding protein 15B OS=Homo sapiens GN=RBM15B PE=1 SV=3

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 14/130 (10%)

Query: 30  LRIAQRMRLEQTQIDGVVRKMQ--TDGEHCMLLALPC--------GRTEVDVVQQSAYLQ 79
           L+IAQR+RL+Q ++D V R+++  +   + +LLA           G   V+   Q   L+
Sbjct: 763 LKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQRRLLR 822

Query: 80  SGFITYLQQKQAAGIVNIAAPGTQ--QAAYIVHVFPSCEFANNSLAQIDAQLLKKVSELT 137
           +  ++YL+QKQAAG++++   G++      +++ FP C+F+   L Q   + L K+ E  
Sbjct: 823 N-LVSYLKQKQAAGVISLPVGGSKGRDGTGMLYAFPPCDFSQQYL-QSALRTLGKLEEEH 880

Query: 138 YLVIIIATTA 147
            +++I+  TA
Sbjct: 881 MVIVIVRDTA 890

May function in the regulation of alternative or illicit splicing.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
242007042	3797	protein gar2, putative [Pediculus humanu	0.927	0.037	0.682	1e-52
307200599	4415	Protein split ends [Harpegnathos saltato	0.927	0.031	0.696	2e-52
340711111	4376	PREDICTED: hypothetical protein LOC10064	0.927	0.032	0.689	2e-51
328789146	4297	PREDICTED: hypothetical protein LOC41224	0.927	0.032	0.689	2e-51
307183144	4330	Protein split ends [Camponotus floridanu	0.927	0.032	0.682	2e-51
322791721	4232	hypothetical protein SINV_11524 [Solenop	0.927	0.033	0.675	1e-50
332028066	4415	Protein split ends [Acromyrmex echinatio	0.927	0.031	0.675	1e-50
380013940	2740	PREDICTED: uncharacterized protein LOC10	0.927	0.051	0.689	2e-50
312385046	7096	hypothetical protein AND_01230 [Anophele	0.927	0.019	0.648	2e-49
345480387	3764	PREDICTED: hypothetical protein LOC10012	0.927	0.037	0.648	9e-48

>gi|242007042|ref|XP_002424351.1| protein gar2, putative [Pediculus humanus corporis] gi|212507751|gb|EEB11613.1| protein gar2, putative [Pediculus humanus corporis]

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 99/145 (68%), Positives = 119/145 (82%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQ D EHCMLL
Sbjct: 3656 MHFVFGNPHVARDSLPCNSDGS----TPPLRIAQRMRLEQTQLEGVARKMQMDNEHCMLL 3711

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR  +DV+QQS  LQ+GFITYLQQKQAAGIVNIA PG+QQAAY+VH+FPSCEFAN 
Sbjct: 3712 ALPCGRDHMDVLQQSTNLQTGFITYLQQKQAAGIVNIAHPGSQQAAYVVHIFPSCEFANE 3771

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            +LA+    LL ++ E+ +LVI+IAT
Sbjct: 3772 NLARNAPDLLHRMQEIPHLVIVIAT 3796

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200599|gb|EFN80740.1| Protein split ends [Harpegnathos saltator]

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 101/145 (69%), Positives = 122/145 (84%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQTD EHCMLL
Sbjct: 4274 MHFVFGNPNVARDSLPCNSDGS----TPPLRIAQRMRLEQTQVEGVARKMQTDNEHCMLL 4329

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR EVDV+QQS  LQ+GFI YLQQKQAAGIVNIAAPG+QQ AY+VH+FPSC+FAN 
Sbjct: 4330 ALPCGRDEVDVLQQSKNLQTGFIMYLQQKQAAGIVNIAAPGSQQPAYVVHIFPSCDFANE 4389

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            SLA+I   LL +V+++ +L+I+IAT
Sbjct: 4390 SLARIAPDLLHRVAKIAHLLIVIAT 4414

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711111|ref|XP_003394124.1| PREDICTED: hypothetical protein LOC100642196 [Bombus terrestris]

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/145 (68%), Positives = 121/145 (83%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQ D EHCMLL
Sbjct: 4235 MHFVFGNPNVARDSLPCNSDGS----TPPLRIAQRMRLEQTQVEGVARKMQMDNEHCMLL 4290

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR EVDV+QQS  LQ+GFI YLQQKQAAGIVNIAAPG+QQ AY+VH+FPSC+FAN 
Sbjct: 4291 ALPCGRDEVDVLQQSKNLQTGFIMYLQQKQAAGIVNIAAPGSQQPAYVVHIFPSCDFANE 4350

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            SLA+I   LL +V+++ +L+I+IAT
Sbjct: 4351 SLARIAPDLLHRVAKIAHLLIVIAT 4375

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789146|ref|XP_395705.4| PREDICTED: hypothetical protein LOC412243 [Apis mellifera]

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/145 (68%), Positives = 121/145 (83%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQ D EHCMLL
Sbjct: 4156 MHFVFGNPNVARDSLPCNSDGS----TPPLRIAQRMRLEQTQVEGVARKMQMDNEHCMLL 4211

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR EVDV+QQS  LQ+GFI YLQQKQAAGIVNIAAPG+QQ AY+VH+FPSC+FAN 
Sbjct: 4212 ALPCGRDEVDVLQQSKNLQTGFIMYLQQKQAAGIVNIAAPGSQQPAYVVHIFPSCDFANE 4271

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            SLA+I   LL +V+++ +L+I+IAT
Sbjct: 4272 SLARIAPDLLHRVAKIAHLLIVIAT 4296

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183144|gb|EFN70061.1| Protein split ends [Camponotus floridanus]

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/145 (68%), Positives = 122/145 (84%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQTD EHCMLL
Sbjct: 4189 MHFVFGNPNVARDSLPCNSDGS----TPPLRIAQRMRLEQTQVEGVARKMQTDNEHCMLL 4244

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR EVDV+QQS  LQ+GFI YLQQKQAAGIVNIAAPG+QQ AY+VH+FPSC+FA+ 
Sbjct: 4245 ALPCGRDEVDVLQQSKNLQTGFIMYLQQKQAAGIVNIAAPGSQQPAYVVHIFPSCDFAHE 4304

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            +LA+I   LL +V+++ +L+I+IAT
Sbjct: 4305 NLARIAPDLLHRVAKIAHLLIVIAT 4329

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322791721|gb|EFZ15997.1| hypothetical protein SINV_11524 [Solenopsis invicta]

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 98/145 (67%), Positives = 122/145 (84%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQT+ EHCMLL
Sbjct: 4091 MHFVFGNPRVARDSLPCNSDGS----TPPLRIAQRMRLEQTQVEGVARKMQTEDEHCMLL 4146

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR EVDV+QQS  LQ+GFI YLQQKQAAGIVNIAAPG+QQAAY+VH+FPSC+FA+ 
Sbjct: 4147 ALPCGRDEVDVLQQSKNLQTGFIMYLQQKQAAGIVNIAAPGSQQAAYVVHIFPSCDFAHE 4206

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            +LA+I   L  +V+++ +L+I+IAT
Sbjct: 4207 TLARIAPDLHHRVAKIAHLLIVIAT 4231

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028066|gb|EGI68117.1| Protein split ends [Acromyrmex echinatior]

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 98/145 (67%), Positives = 122/145 (84%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQT+ EHCMLL
Sbjct: 4274 MHFVFGNPRVARDSLPCNSDGS----TPPLRIAQRMRLEQTQVEGVARKMQTEDEHCMLL 4329

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR EVDV+QQS  LQ+GFI YLQQKQAAGIVNIAAPG+QQAAY+VH+FPSC+FA+ 
Sbjct: 4330 ALPCGRDEVDVLQQSKNLQAGFIMYLQQKQAAGIVNIAAPGSQQAAYVVHIFPSCDFAHE 4389

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            +LA+I   L  +V+++ +L+I+IAT
Sbjct: 4390 TLARIAPDLHHRVAKIAHLLIVIAT 4414

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013940|ref|XP_003691002.1| PREDICTED: uncharacterized protein LOC100865533 [Apis florea]

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 100/145 (68%), Positives = 121/145 (83%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+VFGN  +ARD+LP  ++G     TP LRIAQRMRLEQTQ++GV RKMQ D EHCMLL
Sbjct: 2599 MHFVFGNPNVARDSLPCNSDGS----TPPLRIAQRMRLEQTQVEGVARKMQMDNEHCMLL 2654

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR EVDV+QQS  LQ+GFI YLQQKQAAGIVNIAAPG+QQ AY+VH+FPSC+FAN 
Sbjct: 2655 ALPCGRDEVDVLQQSKNLQTGFIMYLQQKQAAGIVNIAAPGSQQPAYVVHIFPSCDFANE 2714

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            SLA+I   LL +V+++ +L+I+IAT
Sbjct: 2715 SLARIAPDLLHRVAKIAHLLIVIAT 2739

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312385046|gb|EFR29632.1| hypothetical protein AND_01230 [Anopheles darlingi]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/145 (64%), Positives = 114/145 (78%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+V+GN  +A  +LP  ++G     TP LRIAQRMRLE  QIDGV RKMQ   EHCMLL
Sbjct: 6955 MHFVYGNPNVAGSSLPSNSDGS----TPPLRIAQRMRLEPAQIDGVARKMQMVNEHCMLL 7010

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCGR  +DV+QQ   LQ+GFITYLQQKQAAGIVNIAAPG+ QAAY+VH+FPSCEFAN 
Sbjct: 7011 ALPCGRDRMDVLQQQNNLQTGFITYLQQKQAAGIVNIAAPGSAQAAYVVHIFPSCEFANE 7070

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            +LA+I   L+ +V+ + YL+I+IAT
Sbjct: 7071 NLARIAPDLMHRVANIQYLLIVIAT 7095

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480387|ref|XP_001606953.2| PREDICTED: hypothetical protein LOC100123328 [Nasonia vitripennis]

 Score =  194 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 94/145 (64%), Positives = 118/145 (81%), Gaps = 4/145 (2%)

Query: 1    MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
            MH+V+GN  +AR++LP  ++G   P    LRIAQRMRLE TQ++GV RKMQTD EHCMLL
Sbjct: 3623 MHFVYGNPNVARESLPFNSDGSTLP----LRIAQRMRLEPTQVEGVARKMQTDNEHCMLL 3678

Query: 61   ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
            ALPCG   +DVVQQS  LQ+GFITYLQQKQAAGIVNIAAPG+QQ A++VH+FPSC+FAN 
Sbjct: 3679 ALPCGHDHMDVVQQSKNLQAGFITYLQQKQAAGIVNIAAPGSQQPAFVVHIFPSCDFANE 3738

Query: 121  SLAQIDAQLLKKVSELTYLVIIIAT 145
            +LA+I   LL + +++ +LVI+IAT
Sbjct: 3739 NLARIAPDLLHRAADIAHLVIVIAT 3763

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
FB|FBgn0016977	5560	spen "split ends" [Drosophila	0.927	0.025	0.620	6.7e-41
UNIPROTKB|I3L5D8	280	SPEN "Uncharacterized protein"	0.914	0.496	0.506	6.5e-35
UNIPROTKB|Q96T58	3664	SPEN "Msx2-interacting protein	0.914	0.037	0.513	2.3e-33
UNIPROTKB|F1LU10	3618	LOC100365546 "Protein LOC10036	0.914	0.038	0.506	6e-33
UNIPROTKB|F1M455	3631	LOC100365546 "Protein LOC10036	0.914	0.038	0.506	6.1e-33
UNIPROTKB|F1M815	3641	LOC100365546 "Protein LOC10036	0.914	0.038	0.506	6.1e-33
RGD|1589867	3642	Spen "spen homolog, transcript	0.914	0.038	0.506	6.1e-33
MGI|MGI:1891706	3644	Spen "SPEN homolog, transcript	0.914	0.038	0.506	6.1e-33
UNIPROTKB|E1BNF6	3653	SPEN "Uncharacterized protein"	0.914	0.038	0.506	6.1e-33
UNIPROTKB|F1MRK2	3655	SPEN "Uncharacterized protein"	0.914	0.038	0.506	6.1e-33

FB|FBgn0016977 spen "split ends" [Drosophila melanogaster (taxid:7227)]

 Score = 455 (165.2 bits), Expect = 6.7e-41, P = 6.7e-41
 Identities = 90/145 (62%), Positives = 110/145 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             MH+V GN  +AR +LP   E      TP LRIAQRMRLEQTQ++GV +KMQ D EHCMLL
Sbjct:  5419 MHFVHGNPNVARASLPSLVETN----TPLLRIAQRMRLEQTQLEGVAKKMQVDKEHCMLL 5474

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR   DV+Q S  LQ+GFITYLQQK AAGIVNI  PG++QAAY+VH+FPSC+FAN 
Sbjct:  5475 ALPCGRDHADVLQHSRNLQTGFITYLQQKMAAGIVNIPIPGSEQAAYVVHIFPSCDFANE 5534

Query:   121 SLAQIDAQLLKKVSELTYLVIIIAT 145
             +L +    L  +V+EL +L+I+IAT
Sbjct:  5535 NLERAAPDLKNRVAELAHLLIVIAT 5559

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007379 "segment specification" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0007411 "axon guidance" evidence=IMP

GO:0007400 "neuroblast fate determination" evidence=IMP

GO:0008347 "glial cell migration" evidence=IMP

GO:0007403 "glial cell fate determination" evidence=IMP

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=IMP

GO:0016055 "Wnt receptor signaling pathway" evidence=IMP

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0007422 "peripheral nervous system development" evidence=IMP

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0035321 "maintenance of imaginal disc-derived wing hair orientation" evidence=IMP

GO:0048106 "establishment of thoracic bristle planar orientation" evidence=IMP

GO:0035222 "wing disc pattern formation" evidence=IMP

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=IGI

GO:0048749 "compound eye development" evidence=IMP

UNIPROTKB|I3L5D8 SPEN "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:   140 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 193

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:   194 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 253

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:   254 HLSRLAPDLLASISNISPHLMIVIAS 279

GO:0050769 "positive regulation of neurogenesis" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003697 "single-stranded DNA binding" evidence=IEA

GO:0001191 "RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IEA

UNIPROTKB|Q96T58 SPEN "Msx2-interacting protein" [Homo sapiens (taxid:9606)]

 Score = 382 (139.5 bits), Expect = 2.3e-33, P = 2.3e-33
 Identities = 75/146 (51%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE TQ++GV R+M  + ++C+LL
Sbjct:  3524 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEATQLEGVARRMTVETDYCLLL 3577

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3578 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3637

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3638 HLSRLAPDLLASISNISPHLMIVIAS 3663

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0003697 "single-stranded DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0050769 "positive regulation of neurogenesis" evidence=IMP

GO:0001191 "RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription" evidence=IDA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IPI

GO:0017053 "transcriptional repressor complex" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1LU10 LOC100365546 "Protein LOC100365546" [Rattus norvegicus (taxid:10116)]

 Score = 378 (138.1 bits), Expect = 6.0e-33, P = 6.0e-33
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:  3478 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 3531

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3532 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3591

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3592 HLSRLAPDLLASISNISPHLMIVIAS 3617

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1M455 LOC100365546 "Protein LOC100365546" [Rattus norvegicus (taxid:10116)]

 Score = 378 (138.1 bits), Expect = 6.1e-33, P = 6.1e-33
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:  3491 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 3544

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3545 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3604

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3605 HLSRLAPDLLASISNISPHLMIVIAS 3630

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1M815 LOC100365546 "Protein LOC100365546" [Rattus norvegicus (taxid:10116)]

 Score = 378 (138.1 bits), Expect = 6.1e-33, P = 6.1e-33
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:  3501 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 3554

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3555 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3614

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3615 HLSRLAPDLLASISNISPHLMIVIAS 3640

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1589867 Spen "spen homolog, transcriptional regulator (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 378 (138.1 bits), Expect = 6.1e-33, P = 6.1e-33
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:  3502 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 3555

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3556 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3615

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3616 HLSRLAPDLLASISNISPHLMIVIAS 3641

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0001085 "RNA polymerase II transcription factor binding" evidence=ISO

GO:0001191 "RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription" evidence=ISO

GO:0003697 "single-stranded DNA binding" evidence=ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0003714 "transcription corepressor activity" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0017053 "transcriptional repressor complex" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0050769 "positive regulation of neurogenesis" evidence=ISO

GO:0003677 "DNA binding" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

MGI|MGI:1891706 Spen "SPEN homolog, transcriptional regulator (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 378 (138.1 bits), Expect = 6.1e-33, P = 6.1e-33
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:  3504 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 3557

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3558 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3617

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3618 HLSRLAPDLLASISNISPHLMIVIAS 3643

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=ISO

GO:0001191 "RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0003697 "single-stranded DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0003714 "transcription corepressor activity" evidence=IDA

GO:0003723 "RNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0050769 "positive regulation of neurogenesis" evidence=ISO

UNIPROTKB|E1BNF6 SPEN "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 378 (138.1 bits), Expect = 6.1e-33, P = 6.1e-33
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:  3513 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 3566

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3567 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3626

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3627 HLSRLAPDLLASISNISPHLMIVIAS 3652

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1MRK2 SPEN "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 378 (138.1 bits), Expect = 6.1e-33, P = 6.1e-33
 Identities = 74/146 (50%), Positives = 110/146 (75%)

Query:     1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
             +H+V GN++LA  +LPL+ EGG  PP   LRIAQRMRLE +Q++GV R+M  + ++C+LL
Sbjct:  3515 LHFVSGNNVLAHRSLPLS-EGG--PP---LRIAQRMRLEASQLEGVARRMTVETDYCLLL 3568

Query:    61 ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
             ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct:  3569 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 3628

Query:   121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
              L+++   LL  +S ++ +L+I+IA+
Sbjct:  3629 HLSRLAPDLLASISNISPHLMIVIAS 3654

GO:0050769 "positive regulation of neurogenesis" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0017053 "transcriptional repressor complex" evidence=IEA

GO:0003714 "transcription corepressor activity" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003697 "single-stranded DNA binding" evidence=IEA

GO:0001191 "RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription" evidence=IEA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8SX83	SPEN_DROME	No assigned EC number	0.6206	0.9276	0.0253	yes	N/A
Q96T58	MINT_HUMAN	No assigned EC number	0.5068	0.9144	0.0379	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	152
pfam07744	109	pfam07744, SPOC, SPOC domain	5e-16

>gnl|CDD|219549 pfam07744, SPOC, SPOC domain

 Score = 68.9 bits (169), Expect = 5e-16
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 22/114 (19%)

Query: 1   MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGE-HCML 59
            H V G+  L    LPL             R+  R RL+ +Q++  +RK++       ++
Sbjct: 17  AHLVSGDEKLVNSLLPL-------------RLEIRGRLDLSQVEKYLRKLRKSSTKAVVV 63

Query: 60  LALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFP 113
           LAL       D     A      I YLQ KQ AG+  +  PG+Q     +++ P
Sbjct: 64  LAL-----SPDSESDRAAFDE-LIDYLQSKQRAGVAKVGDPGSQ--VKDLYLIP 109

The SPOC (Spen paralogue and orthologue C-terminal) domain is involved in developmental signalling. Length = 109

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG0112|consensus	975		99.9
PF07744	119	SPOC: SPOC domain; InterPro: IPR012921 Spen (split	99.65

>KOG0112|consensus

Probab=99.90  E-value=5.4e-25  Score=206.57  Aligned_cols=143  Identities=21%  Similarity=0.310  Sum_probs=122.3

Q ss_pred             CceeeCCHHHHHhhcCCCcCCCCCCCCCceeeeeecCCCCCcchhhhhhcc--cCCCeEEEEEeccCCCcc--------h
Q psy5895           1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQ--TDGEHCMLLALPCGRTEV--------D   70 (152)
Q Consensus         1 mH~l~Gn~~v~~~~L~~~~~g~~~~~~~~LrItQRlRLd~~~Ld~V~rri~--~~~~~cilLAlp~~~~~~--------d   70 (152)
                      ||++.||.+++..+|....++   .+..+|+|+||+||||+++++|.+|+.  ..+++++++++++..+..        |
T Consensus       820 ~~~~~gdk~v~~~ll~e~~t~---~k~a~~~ieq~~q~d~pk~~dv~k~~~~~~~~~~~g~s~~~~~s~s~k~~~pp~pd  896 (975)
T KOG0112|consen  820 QHLLLGDKGVIISLLKEERTS---DKRAHLSIEQRLQLDQPKLDDVEKRDDEAGKDGDAGNSGNGGSSDSEKADLPPPPD  896 (975)
T ss_pred             hhhhccccchhhhhhhccccc---CcccCccHHHHhhccCCcccchhhhhhhcCCcccccccCCCCcccccCCCCCCCCC
Confidence            799999999998888754332   357999999999999999999999954  579999999999876532        3


Q ss_pred             hhhhHHHHHHHHHHHhhhcccceEEecCCCCCCC--CceEEEEeCCChhHHHHHHHHhHHHHhhccCCCcEEEEEEeccC
Q psy5895          71 VVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQ--AAYIVHVFPSCEFANNSLAQIDAQLLKKVSELTYLVIIIATTAN  148 (152)
Q Consensus        71 ~~~q~~~l~~~lV~YLkqKqAAGIisl~~~~~~~--~~~vlhiFPPCeFs~~~L~~~Ap~L~~~~~~~~hLviVi~~~~~  148 (152)
                      ..+-+++..+|||+||+||+|||+|++.+++.++  ..+|+|+||||||++++|...|..+-+.  .++|+|+|+|++.+
T Consensus       897 ~~s~~~rp~q~l~~~~e~k~~~~~~s~d~e~~~d~~a~~~~~a~pp~e~~~e~~~~~a~s~~e~--~er~~vpv~~r~~s  974 (975)
T KOG0112|consen  897 PASLSERPLQNLVSYLEQKKAAGVISLDDEDHKDAEATGVLRAFPPCEFSKEQLSLTAYSLDEQ--GERKLVPVRVRGDS  974 (975)
T ss_pred             CcccccchhHHHHHhhhhhhccCccccccccccchhcccccccCCCchhhhhcccchhhhcccc--cccccceEEeeccC
Confidence            3344556778999999999999999999988765  5799999999999999999999988885  57999999998765

>PF07744 SPOC: SPOC domain; InterPro: IPR012921 Spen (split end) proteins regulate the expression of key transcriptional effectors in diverse signalling pathways

Probab=99.65  E-value=2.3e-16  Score=115.03  Aligned_cols=102  Identities=26%  Similarity=0.430  Sum_probs=68.5

Q ss_pred             CceeeCCHHHHHhhcCCCcCCCCCCCCCceeeeeecCCCCCcchhhhhhcccCC-CeEEEEEeccCCCcchhhhhHHHHH
Q psy5895           1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDG-EHCMLLALPCGRTEVDVVQQSAYLQ   79 (152)
Q Consensus         1 mH~l~Gn~~v~~~~L~~~~~g~~~~~~~~LrItQRlRLd~~~Ld~V~rri~~~~-~~cilLAlp~~~~~~d~~~q~~~l~   79 (152)
                      +|+++|+.++.+..|...       ..++.+|.+|+|||..++++..++|+..+ .+|+++++  ..++.+...+.+.++
T Consensus        17 a~~v~G~~~~~~~~l~~~-------~~~p~~i~i~gRl~~~~~~~yl~~i~~s~~~~v~v~~~--~~~~~~~~~~~~~~~   87 (119)
T PF07744_consen   17 AHFVSGNCDLLDNVLPWQ-------QLPPKKIDIRGRLDPEKVWDYLRQIRKSRSKDVCVVAL--SSPESDSNSDRRPFQ   87 (119)
T ss_dssp             EEEEEE-HHHHHHHS--------------EEE-EEEE-SHHHHHHHHHHTSSTTT-EEEEEEE---SSHHHHHHHHHHHH
T ss_pred             EEEEEcchhHhhhhcccc-------cCCCcEEEEEeecCHHHHHHHHHhcccCCCceEEEEEE--cCCcccCHHHHHHHH
Confidence            589999988997888643       25889999999999999999999998765 48888888  111223334444454


Q ss_pred             HHHHHHhhhcccceEEecCCCCCCCCceEEEEeC
Q psy5895          80 SGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFP  113 (152)
Q Consensus        80 ~~lV~YLkqKqAAGIisl~~~~~~~~~~vlhiFP  113 (152)
                       +|++||++|+.||||++++.+.+ ....+|+||
T Consensus        88 -~l~~Yl~~k~r~GVv~~~~~~~~-~~~dlYl~P  119 (119)
T PF07744_consen   88 -KLVDYLKSKQRAGVVSVGNSPSG-QVKDLYLFP  119 (119)
T ss_dssp             -HTHHHHHHHTEEEEEEE--TT---S-EEEEEE-
T ss_pred             -HHHHHHhhCCEEEEEecCCCCCC-ceeEEEEcC
Confidence             69999999999999999975543 379999999

They are large proteins characterised by N-terminal RNA-binding motifs and a highly conserved C-terminal SPOC (Spen paralog and ortholog C-terminal) domain. The function of the SPOC domain is unknown, but the SPOC domain of the SHARP Spen protein has been implicated in the interaction of SHARP with the SMRT/NcoR corepressor, where SHARP plays an essential role in the repressor complex []. The SPOC domain is folded into a single compact domain consisting of a beta-barrel with seven strands framed by six alpha helices. A number of deep grooves and clefts in the surface, plus two nonpolar loops, render the SPOC domain well suited to protein-protein interactions; most of the conserved residues occur on the protein surface rather than in the core. Other proteins containing a SPOC domain include drosophila Split ends, which promotes sclerite development in the head and restricts it in the thorax, and mouse MINT (homologue of SHARP), which is involved in skeletal and neuronal development via its repression of Msx2.; PDB: 1OW1_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
1ow1_A	195	Crystal Structure Of The Spoc Domain Of The Human T		1e-39

>pdb|1OW1|A Chain A, Crystal Structure Of The Spoc Domain Of The Human Transcriptional Corepressor, Sharp Length = 195

Iteration: 1
 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 109/146 (74%), Gaps = 7/146 (4%)
Query: 1   MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
           +H+V GN++LA  +LPL+ EGG     P LRIAQRMRLE TQ++GV R+M  + ++C+LL
Sbjct: 55  LHFVSGNNVLAHRSLPLS-EGG-----PPLRIAQRMRLEATQLEGVARRMTVETDYCLLL 108
Query: 61  ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
           ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct: 109 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 168
Query: 121 SLAQIDAQLLKKVSELT-YLVIIIAT 145
            L+++   LL  +S ++ +L+I+IA+
Sbjct: 169 HLSRLAPDLLASISNISPHLMIVIAS 194

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
1ow1_A	195	Smart/HDAC1 associated repressor protein; beta-alp	3e-55

>1ow1_A Smart/HDAC1 associated repressor protein; beta-alpha-barrel, SPOC domain,, transcription; 1.80A {Homo sapiens} SCOP: b.131.1.3 Length = 195

 Score =  171 bits (434), Expect = 3e-55
 Identities = 72/146 (49%), Positives = 106/146 (72%), Gaps = 7/146 (4%)

Query: 1   MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
           +H+V GN++LA  +LPL+  G      P LRIAQRMRLE TQ++GV R+M  + ++C+LL
Sbjct: 55  LHFVSGNNVLAHRSLPLSEGG------PPLRIAQRMRLEATQLEGVARRMTVETDYCLLL 108

Query: 61  ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
           ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct: 109 ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 168

Query: 121 SLAQIDAQLLKKVSEL-TYLVIIIAT 145
            L+++   LL  +S +  +L+I+IA+
Sbjct: 169 HLSRLAPDLLASISNISPHLMIVIAS 194

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
1ow1_A	195	Smart/HDAC1 associated repressor protein; beta-alp	100.0

>1ow1_A Smart/HDAC1 associated repressor protein; beta-alpha-barrel, SPOC domain,, transcription; 1.80A {Homo sapiens} SCOP: b.131.1.3

Probab=100.00  E-value=8e-61  Score=385.48  Aligned_cols=140  Identities=52%  Similarity=0.954  Sum_probs=131.9

Q ss_pred             CceeeCCHHHHHhhcCCCcCCCCCCCCCceeeeeecCCCCCcchhhhhhcccCCCeEEEEEeccCCCcchhhhhHHHHHH
Q psy5895           1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQS   80 (152)
Q Consensus         1 mH~l~Gn~~v~~~~L~~~~~g~~~~~~~~LrItQRlRLd~~~Ld~V~rri~~~~~~cilLAlp~~~~~~d~~~q~~~l~~   80 (152)
                      ||+|+||.+++.++|++. ++     .++|||+||||||++|||+|+|||+.+++||+|||+||+++.+|+.+|+++|++
T Consensus        55 mh~v~Gn~~l~~~~L~~~-~~-----~~~LRItQRmRLd~~qLe~V~rRi~~~~~~cilLAlp~~~~~~d~~~q~~~L~~  128 (195)
T 1ow1_A           55 LHFVSGNNVLAHRSLPLS-EG-----GPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGRDQEDVVSQTESLKA  128 (195)
T ss_dssp             EEEEEECHHHHHHHSCCC---------CCEEECEEEECSHHHHHHHHHHTSSTTTEEEEEEEECCSSHHHHHHHHHHHHH
T ss_pred             EEEEeCcHHHHHHhCCCC-CC-----CCceeeehhhccChHHHHHHHHHHhCCCCceEEEEecCCCCchhhHhhhhHHHH
Confidence            799999999999999764 32     389999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcccceEEecCCCCCCCCceEEEEeCCChhHHHHHHHHhHHHHhhccC-CCcEEEEEEec
Q psy5895          81 GFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSE-LTYLVIIIATT  146 (152)
Q Consensus        81 ~lV~YLkqKqAAGIisl~~~~~~~~~~vlhiFPPCeFs~~~L~~~Ap~L~~~~~~-~~hLviVi~~~  146 (152)
                      +||+||++||||||||++++|+++++||||||||||||++||+++||+|++.+.+ ++|||||||++
T Consensus       129 ~fV~YL~qKqAAGIisl~~~~s~~~~~vlhiFPPCeFs~~~L~~~AP~L~~~l~~~~~hLliVI~~~  195 (195)
T 1ow1_A          129 AFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLMIVIASV  195 (195)
T ss_dssp             HTHHHHHHHTEEEEEEECCTTCCSCCEEEEEECSSHHHHHHHHHHCHHHHHHHTTTSCCEEEEEEEC
T ss_pred             HHHHHHHhCccceEEecCCCCCCCcceEEEEcCCcHHHHHHHHHHChHHHhhhccCCCeEEEEEEeC
Confidence            9999999999999999999999999999999999999999999999999998775 58999999986

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1ow1a_	170	b.131.1.3 (A:) SMART/HDAC1 associated repressor pr	8e-56

>d1ow1a_ b.131.1.3 (A:) SMART/HDAC1 associated repressor protein, SHARP {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All beta proteins
fold: SPOC domain-like
superfamily: SPOC domain-like
family: SPOC domain
domain: SMART/HDAC1 associated repressor protein, SHARP
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (433), Expect = 8e-56
 Identities = 71/146 (48%), Positives = 105/146 (71%), Gaps = 7/146 (4%)

Query: 1   MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLL 60
           +H+V GN++LA  +LPL+         P LRIAQRMRLE TQ++GV R+M  + ++C+LL
Sbjct: 30  LHFVSGNNVLAHRSLPLS------EGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLL 83

Query: 61  ALPCGRTEVDVVQQSAYLQSGFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANN 120
           ALPCGR + DVV Q+  L++ FITYLQ KQAAGI+N+  PG+ Q AY++ +FP CEF+ +
Sbjct: 84  ALPCGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSES 143

Query: 121 SLAQIDAQLLKKVSEL-TYLVIIIAT 145
            L+++   LL  +S +  +L+I+IA+
Sbjct: 144 HLSRLAPDLLASISNISPHLMIVIAS 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d1ow1a_	170	SMART/HDAC1 associated repressor protein, SHARP {H	100.0

>d1ow1a_ b.131.1.3 (A:) SMART/HDAC1 associated repressor protein, SHARP {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SPOC domain-like
superfamily: SPOC domain-like
family: SPOC domain
domain: SMART/HDAC1 associated repressor protein, SHARP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-64  Score=394.35  Aligned_cols=140  Identities=51%  Similarity=0.946  Sum_probs=132.6

Q ss_pred             CceeeCCHHHHHhhcCCCcCCCCCCCCCceeeeeecCCCCCcchhhhhhcccCCCeEEEEEeccCCCcchhhhhHHHHHH
Q psy5895           1 MHYVFGNHLLARDALPLAAEGGLTPPTPTLRIAQRMRLEQTQIDGVVRKMQTDGEHCMLLALPCGRTEVDVVQQSAYLQS   80 (152)
Q Consensus         1 mH~l~Gn~~v~~~~L~~~~~g~~~~~~~~LrItQRlRLd~~~Ld~V~rri~~~~~~cilLAlp~~~~~~d~~~q~~~l~~   80 (152)
                      ||||+||.+++..+|++.++|      ++|||+|||||||+|||||+|||+..++||+||||||+++.+|+.+|+++|++
T Consensus        30 mH~l~Gn~~la~~~l~~~~~~------~~LrI~QRlRLd~~kLe~V~rRi~~~~~~c~lLAlp~~~~~~d~~~q~~~l~~  103 (170)
T d1ow1a_          30 LHFVSGNNVLAHRSLPLSEGG------PPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGRDQEDVVSQTESLKA  103 (170)
T ss_dssp             EEEEEECHHHHHHHSCCC---------CCEEECEEEECSHHHHHHHHHHTSSTTTEEEEEEEECCSSHHHHHHHHHHHHH
T ss_pred             EEEEeCCHHHHHhhCCCCCCC------CcEEeeeecccChHHHHHHHHHHhcCCCceEEEEeeCCCCccccchhhhHHHH
Confidence            899999999999999865332      68999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcccceEEecCCCCCCCCceEEEEeCCChhHHHHHHHHhHHHHhhccC-CCcEEEEEEec
Q psy5895          81 GFITYLQQKQAAGIVNIAAPGTQQAAYIVHVFPSCEFANNSLAQIDAQLLKKVSE-LTYLVIIIATT  146 (152)
Q Consensus        81 ~lV~YLkqKqAAGIisl~~~~~~~~~~vlhiFPPCeFs~~~L~~~Ap~L~~~~~~-~~hLviVi~~~  146 (152)
                      |||+||||||||||||++++|+++++||||||||||||++||+++||+|++++.+ +|||+||||||
T Consensus       104 ~lV~YLkqKqAAGVI~l~~~~~~~~~~VLh~FPPCeFs~~~L~~~ap~L~~~~~~~~dhLliVi~tv  170 (170)
T d1ow1a_         104 AFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLASISNISPHLMIVIASV  170 (170)
T ss_dssp             HTHHHHHHHTEEEEEEECCTTCCSCCEEEEEECSSHHHHHHHHHHCHHHHHHHTTTSCCEEEEEEEC
T ss_pred             HHHHHHHHhccCceEecCCCCCCCceEEEEecCCcHHHHHHHHHHhHHHHhhhccCCCeEEEEEEeC
Confidence            9999999999999999999999999999999999999999999999999999987 68999999986