Psyllid ID: psy5922


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320---
MKSTSLCSSGPTLESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEKDK
cccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccHHHHHHHHHHHccHHHHccccHHHHHHHcHHHHHHHHHHHHHHHHHHHccc
cccHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHccHHHHccccHHHHcHccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHEHcccHHHHHHHcHHHHHHHHHHHHHHHHHHcccc
mkstslcssgptleskqVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTkegilrpirglNVVIAGTAPAHALYFSSYEFTKYFVSNnfkvnenisygTAGVIATILHDAIHVPTDVVKQRLqmydspykSVIDCILRVHAEEGLAAFFRSFTTQlvmnipfhtshFIAVHAEEGLAAFFRSFTTQlvmnipfhtshFIAYEFAqnlsnpnreyhALTHIVSGGVAGGVAAAVTTPLDVCKtflntqptgqaVSGLRNAITSVYALGglagffkgtkARVLYTMPSTAICWSTYETFKHFLHEKDK
mkstslcssgptleskqVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEKDK
MKSTSLCSSGPTLESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIvsggvaggvaaavTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEKDK
****************QVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFL*****
********************HLLAGASAGIMEHIIVYPLDTVKTQMQSLT*****GIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVS****VNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSN**REYHALTHIVSGGVAGGVAAAVTTPLDVCKTFLNT*P*****SGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHE***
************LESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEKDK
*KSTSLCSSGPTLESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEK**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooo
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKSTSLCSSGPTLESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEKDK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query323 2.2.26 [Sep-21-2011]
Q287T7332 Mitoferrin-1 OS=Danio rer yes N/A 0.848 0.825 0.481 2e-76
Q7T292376 Mitoferrin-2 OS=Danio rer no N/A 0.842 0.723 0.470 2e-74
Q9VAY3379 Mitoferrin OS=Drosophila yes N/A 0.848 0.722 0.467 3e-74
Q9NYZ2338 Mitoferrin-1 OS=Homo sapi yes N/A 0.857 0.819 0.476 1e-73
Q66H23338 Mitoferrin-1 OS=Rattus no yes N/A 0.854 0.816 0.478 2e-73
Q920G8338 Mitoferrin-1 OS=Mus muscu yes N/A 0.854 0.816 0.475 2e-72
Q8R0Z5364 Mitoferrin-2 OS=Mus muscu no N/A 0.879 0.780 0.438 9e-70
Q96A46364 Mitoferrin-2 OS=Homo sapi no N/A 0.879 0.780 0.438 1e-69
Q23125312 Mitoferrin OS=Caenorhabdi yes N/A 0.854 0.884 0.412 2e-60
Q620A6311 Mitoferrin OS=Caenorhabdi N/A N/A 0.854 0.887 0.416 1e-58
>sp|Q287T7|MFRN1_DANRE Mitoferrin-1 OS=Danio rerio GN=slc25a37 PE=1 SV=1 Back     alignment and function desciption
 Score =  285 bits (730), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 153/318 (48%), Positives = 205/318 (64%), Gaps = 44/318 (13%)

Query: 18  VGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLT---RKSYKGIIESLQHMMTKEGILRPI 74
           +G H+ AGA AGI+EH ++YP+D+VKT+MQSL    +  Y+ +  +L+ ++  EG+LRP+
Sbjct: 33  LGTHMTAGAVAGILEHTVMYPVDSVKTRMQSLQPDPKAQYRSVYGALKRIVRTEGLLRPL 92

Query: 75  RGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKV--NENISYGTAGVIATILHDAIHVPT 132
           RGLN+ + G  PAHALYF+ YE  K  +S+  +   N +I+ G AG +AT+LHDA+  P 
Sbjct: 93  RGLNITVLGAGPAHALYFACYERIKRSLSDVIQNGGNSHIANGVAGSVATVLHDAVMNPA 152

Query: 133 DVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEG 192
           +VVKQR+QMY+SPY+S+ DC+L V  +EGLAAF+RS++TQL MNIP              
Sbjct: 153 EVVKQRMQMYNSPYRSLYDCVLMVSRKEGLAAFYRSYSTQLTMNIP-------------- 198

Query: 193 LAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTT 252
                            F   HFI YEF Q   NP+R+Y   THI+SG  AG V+AAVTT
Sbjct: 199 -----------------FQAVHFITYEFMQEHFNPHRQYRPETHIISGAAAGAVSAAVTT 241

Query: 253 PLDVCKTFLNTQPT--------GQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPST 304
           PLDVCKT LNTQ             +SG+ NA+ +VY LGG+  FFKG +ARV+Y MPST
Sbjct: 242 PLDVCKTLLNTQENVALSSAHVSGHLSGMVNALRTVYRLGGVPAFFKGIQARVIYQMPST 301

Query: 305 AICWSTYETFKHFLHEKD 322
           AI WS YE FK+FL + +
Sbjct: 302 AIAWSVYEFFKYFLTQHE 319




Mitochondrial iron transporter that specifically mediates iron uptake in developing erythroid cells, thereby playing an essential role in heme biosynthesis. The iron delivered into the mitochondria, presumably as Fe(2+), is then probably delivered to ferrochelatase to catalyze Fe(2+) incorporation into protoprophyrin IX to make heme.
Danio rerio (taxid: 7955)
>sp|Q7T292|MFRN2_DANRE Mitoferrin-2 OS=Danio rerio GN=slc25a28 PE=2 SV=1 Back     alignment and function description
>sp|Q9VAY3|MFRN_DROME Mitoferrin OS=Drosophila melanogaster GN=mfrn PE=2 SV=1 Back     alignment and function description
>sp|Q9NYZ2|MFRN1_HUMAN Mitoferrin-1 OS=Homo sapiens GN=SLC25A37 PE=2 SV=2 Back     alignment and function description
>sp|Q66H23|MFRN1_RAT Mitoferrin-1 OS=Rattus norvegicus GN=Slc25a37 PE=2 SV=1 Back     alignment and function description
>sp|Q920G8|MFRN1_MOUSE Mitoferrin-1 OS=Mus musculus GN=Slc25a37 PE=1 SV=1 Back     alignment and function description
>sp|Q8R0Z5|MFRN2_MOUSE Mitoferrin-2 OS=Mus musculus GN=Slc25a28 PE=2 SV=1 Back     alignment and function description
>sp|Q96A46|MFRN2_HUMAN Mitoferrin-2 OS=Homo sapiens GN=SLC25A28 PE=2 SV=1 Back     alignment and function description
>sp|Q23125|MFRN_CAEEL Mitoferrin OS=Caenorhabditis elegans GN=W02B12.9 PE=3 SV=1 Back     alignment and function description
>sp|Q620A6|MFRN_CAEBR Mitoferrin OS=Caenorhabditis briggsae GN=CBG02884 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query323
332376188368 unknown [Dendroctonus ponderosae] 0.842 0.739 0.480 1e-81
350420408343 PREDICTED: mitoferrin-1-like [Bombus imp 0.863 0.813 0.514 2e-78
340728109343 PREDICTED: mitoferrin-1-like [Bombus ter 0.863 0.813 0.511 9e-78
383856398340 PREDICTED: mitoferrin-1-like [Megachile 0.866 0.823 0.5 8e-77
289742605381 mitochondrial carrier protein mRS3/4 [Gl 0.848 0.719 0.493 2e-75
198451126388 GA18557 [Drosophila pseudoobscura pseudo 0.863 0.719 0.484 2e-75
195143969388 GL23880 [Drosophila persimilis] gi|19410 0.863 0.719 0.483 2e-75
66550989324 PREDICTED: mitoferrin-1 isoform 2 [Apis 0.866 0.864 0.493 3e-75
50759536308 PREDICTED: mitoferrin-1 [Gallus gallus] 0.848 0.889 0.484 4e-75
327288470383 PREDICTED: mitoferrin-1-like [Anolis car 0.848 0.715 0.484 5e-75
>gi|332376188|gb|AEE63234.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 150/312 (48%), Positives = 206/312 (66%), Gaps = 40/312 (12%)

Query: 12  TLESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGIL 71
           TL +  VG H++AGA AGIMEH ++YPLD+VKT+MQSL      GI+ +L +M+ +EG+L
Sbjct: 8   TLPTDHVGTHMIAGAIAGIMEHCLMYPLDSVKTRMQSLASTGSDGIVATLINMVKQEGLL 67

Query: 72  RPIRGLNVVIAGTAPAHALYFSSYE-----FTKYFVSNNFKVNENISYGTAGVIATILHD 126
           RPIRG+  ++ G  P+HALYFSSYE     FT+   S+ +     + YG AG ++T+LHD
Sbjct: 68  RPIRGMGAMVFGAGPSHALYFSSYEYLKETFTEMVPSSKYNT---LCYGGAGCLSTLLHD 124

Query: 127 AIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIA 186
            +  P +VVKQR+QM +SPY+S++ C++ V+ +EG AAF+RS+TTQL MN+P        
Sbjct: 125 GVMNPAEVVKQRMQMVNSPYRSIVSCLVNVYRKEGFAAFYRSYTTQLTMNVP-------- 176

Query: 187 VHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGV 246
                                  F + HF+ YEFAQ ++N  R Y+   H+ SG +AG V
Sbjct: 177 -----------------------FQSIHFMIYEFAQTVTNKERTYNPAAHMASGALAGAV 213

Query: 247 AAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAI 306
           A+A+TTPLDVCKT LNTQ T QA +GL  A+  +Y L G AG+F+G +AR++Y MPSTAI
Sbjct: 214 ASAITTPLDVCKTLLNTQQTPQA-AGLVQAMKLIYQLKGPAGYFRGMQARIMYQMPSTAI 272

Query: 307 CWSTYETFKHFL 318
           CWSTYE FK+ L
Sbjct: 273 CWSTYEFFKYLL 284




Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420408|ref|XP_003492498.1| PREDICTED: mitoferrin-1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340728109|ref|XP_003402372.1| PREDICTED: mitoferrin-1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|383856398|ref|XP_003703696.1| PREDICTED: mitoferrin-1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|289742605|gb|ADD20050.1| mitochondrial carrier protein mRS3/4 [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|198451126|ref|XP_001358253.2| GA18557 [Drosophila pseudoobscura pseudoobscura] gi|198131346|gb|EAL27391.2| GA18557 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195143969|ref|XP_002012969.1| GL23880 [Drosophila persimilis] gi|194101912|gb|EDW23955.1| GL23880 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|66550989|ref|XP_625179.1| PREDICTED: mitoferrin-1 isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|50759536|ref|XP_417682.1| PREDICTED: mitoferrin-1 [Gallus gallus] Back     alignment and taxonomy information
>gi|327288470|ref|XP_003228949.1| PREDICTED: mitoferrin-1-like [Anolis carolinensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query323
UNIPROTKB|F1NS09325 SLC25A37 "Uncharacterized prot 0.520 0.516 0.505 3.6e-82
FB|FBgn0039561379 mfrn "mitoferrin" [Drosophila 0.532 0.453 0.494 6.5e-81
UNIPROTKB|Q9NYZ2338 SLC25A37 "Mitoferrin-1" [Homo 0.535 0.511 0.511 9.5e-80
RGD|1359361338 Slc25a37 "solute carrier famil 0.535 0.511 0.511 1.5e-79
ZFIN|ZDB-GENE-040426-2125376 slc25a28 "solute carrier famil 0.510 0.438 0.523 4.1e-79
UNIPROTKB|E1B7M3338 E1B7M3 "Uncharacterized protei 0.535 0.511 0.488 4.6e-78
POMBASE|SPAC8C9.12c303 SPAC8C9.12c "mitochondrial iro 0.486 0.518 0.413 4.7e-50
ZFIN|ZDB-GENE-031118-202332 slc25a37 "solute carrier famil 0.520 0.506 0.520 1e-45
MGI|MGI:2180509364 Slc25a28 "solute carrier famil 0.547 0.486 0.494 5.7e-43
RGD|1584155364 Slc25a28 "solute carrier famil 0.547 0.486 0.489 1.5e-42
UNIPROTKB|F1NS09 SLC25A37 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 456 (165.6 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
 Identities = 88/174 (50%), Positives = 123/174 (70%)

Query:    18 VGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLT---RKSYKGIIESLQHMMTKEGILRPI 74
             +G H+LAGA AGIMEH ++YP+D+VKT+MQSL    +  Y+ + E+L+ M+  EG  RP+
Sbjct:    31 LGTHMLAGAVAGIMEHSVMYPVDSVKTRMQSLQPDPKAQYRSVYEALKKMVLTEGFWRPL 90

Query:    75 RGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKV--NENISYGTAGVIATILHDAIHVPT 132
             RG+NV + G  PAHA+YF+ YE  K  +S+  +   N +++ G AG +AT+LHDA+  P 
Sbjct:    91 RGINVTMLGAGPAHAMYFACYEKMKKSLSDTIQHGGNSHLANGIAGSVATLLHDAVMNPA 150

Query:   133 D-VVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFI 185
             + VVKQR+QM++SPYKSV  C+  V   EG  AF+RS+TTQL MN+PF   HFI
Sbjct:   151 EAVVKQRMQMFNSPYKSVWQCVRTVQKTEGFGAFYRSYTTQLTMNVPFQAIHFI 204


GO:0055085 "transmembrane transport" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
FB|FBgn0039561 mfrn "mitoferrin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NYZ2 SLC25A37 "Mitoferrin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1359361 Slc25a37 "solute carrier family 25 (mitochondrial iron transporter), member 37" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2125 slc25a28 "solute carrier family 25, member 28" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1B7M3 E1B7M3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
POMBASE|SPAC8C9.12c SPAC8C9.12c "mitochondrial iron ion transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031118-202 slc25a37 "solute carrier family 25, member 37" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2180509 Slc25a28 "solute carrier family 25, member 28" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1584155 Slc25a28 "solute carrier family 25 (mitochondrial iron transporter), member 28" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q23125MFRN_CAEELNo assigned EC number0.41230.85440.8846yesN/A
O14281YETC_SCHPONo assigned EC number0.35360.83590.8910yesN/A
Q9VAY3MFRN_DROMENo assigned EC number0.46750.84820.7229yesN/A
Q9NYZ2MFRN1_HUMANNo assigned EC number0.47660.85750.8195yesN/A
Q55DY8MFRN_DICDINo assigned EC number0.36270.85130.8928yesN/A
Q287T7MFRN1_DANRENo assigned EC number0.48110.84820.8253yesN/A
Q66H23MFRN1_RATNo assigned EC number0.47810.85440.8165yesN/A
P10566MRS3_YEASTNo assigned EC number0.37410.81730.8407yesN/A
Q920G8MFRN1_MOUSENo assigned EC number0.4750.85440.8165yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-21
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-19
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 4e-15
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 8e-12
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 86.2 bits (214), Expect = 3e-21
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 18 VGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLT---RKSYKGIIESLQHMMTKEGILRPI 74
              LLAG  AG +   + YPLD VKT++QS      + YKGI++  + +  +EGI    
Sbjct: 5  FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64

Query: 75 RGLNVVIAGTAPAHALYFSSYEFTK 99
          +GL   +   APA A+YF +YE  K
Sbjct: 65 KGLLPNLLRVAPAAAIYFGTYETLK 89


Length = 96

>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 323
KOG0760|consensus302 100.0
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0758|consensus297 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762|consensus311 100.0
KOG0753|consensus317 100.0
KOG0754|consensus294 100.0
KOG0759|consensus286 100.0
KOG0757|consensus319 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0761|consensus361 100.0
KOG0751|consensus694 100.0
KOG0768|consensus323 100.0
KOG0766|consensus297 100.0
KOG0755|consensus320 100.0
KOG0756|consensus299 100.0
KOG0770|consensus353 100.0
KOG0749|consensus298 100.0
KOG0036|consensus463 100.0
KOG0765|consensus333 100.0
KOG0769|consensus308 100.0
KOG0763|consensus301 100.0
KOG0750|consensus304 100.0
KOG0767|consensus333 100.0
KOG0764|consensus 299 100.0
KOG0752|consensus320 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753|consensus317 99.98
KOG0760|consensus 302 99.97
KOG0762|consensus311 99.96
PTZ00168259 mitochondrial carrier protein; Provisional 99.96
KOG0757|consensus319 99.96
KOG0754|consensus294 99.96
KOG0759|consensus286 99.96
KOG0768|consensus323 99.96
KOG0761|consensus 361 99.95
KOG0758|consensus297 99.95
KOG0770|consensus 353 99.94
KOG1519|consensus297 99.93
KOG0755|consensus320 99.92
KOG0767|consensus 333 99.92
KOG0751|consensus 694 99.91
KOG0036|consensus463 99.91
KOG0769|consensus 308 99.9
KOG0765|consensus333 99.9
KOG0750|consensus304 99.9
KOG0756|consensus299 99.9
KOG0763|consensus301 99.89
KOG0749|consensus298 99.89
KOG0766|consensus297 99.89
KOG2745|consensus321 99.84
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
KOG2954|consensus427 99.77
KOG1519|consensus297 99.61
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.6
KOG2745|consensus321 99.43
KOG2954|consensus427 98.58
>KOG0760|consensus Back     alignment and domain information
Probab=100.00  E-value=6.7e-56  Score=375.67  Aligned_cols=276  Identities=52%  Similarity=0.883  Sum_probs=261.3

Q ss_pred             hhhHHHHHHHHHHHHhHHhhcccHHHHHHHHhcccc--CCCCcHHHHHHHHHHhhcccccccchhhHHhchhhhhhhhHH
Q psy5922          16 KQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTR--KSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFS   93 (323)
Q Consensus        16 ~~~~~~~l~g~~a~~~~~~i~~Pld~ik~~~q~~~~--~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~f~   93 (323)
                      .+..+++++|++||+++..+++|+|.||+|||+-..  .+..++.+.+++|.+.||+..+|||+...+++..|..+++|.
T Consensus        14 ~~~~~~l~AGa~aGi~EH~vMfPvDtvKTrmQsl~~~~~~~~~i~~~~~~i~~~EG~~a~~RGv~avilGagPAHalYFs   93 (302)
T KOG0760|consen   14 SPVYQHLTAGAFAGILEHSVMFPVDTVKTRMQSLGPPPAKSKNIVSALRKISTTEGLLALYRGVSAVILGAGPAHALYFS   93 (302)
T ss_pred             CcHHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCccccccHHHHHHHHHhhcchHhhhcchhHHHhcCCchhhhhHH
Confidence            448999999999999999999999999999998664  345889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccCchhhhhhHHHHHHHHHhhhcccHHHHHHHHHhcCCCCCcHHHHHHHHHHhhchhhhhhhhchhh
Q psy5922          94 SYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQL  173 (323)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~~~~~~~Pld~vk~r~q~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~i  173 (323)
                      +||..|+.+......+..+...++|++|.++.+.+.+|+|+||.|||+...+|+++++|+++++++||+.+|||++    
T Consensus        94 ~YE~~K~~l~~~~~~n~~la~aisG~~At~~sDAvm~P~dvVKQR~Qm~~~~y~sv~~ci~~v~r~EGl~AFYrsY----  169 (302)
T KOG0760|consen   94 TYEFMKRRLNASFDRNNPLAYAISGACATLISDAVMNPFDVVKQRMQMYNSPYKSVWDCIRTVYRNEGLGAFYRSY----  169 (302)
T ss_pred             HHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccCCCccHHHHHHHHHHhcchhHhhhcc----
Confidence            9999999998775557789999999999999999999999999999999999999999999999999999999999    


Q ss_pred             hcccCccchhhHHHhhhhhHHHHHhhhhhhhhcccCccchhHHhHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHhhcch
Q psy5922         174 VMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTP  253 (323)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~it~P  253 (323)
                                                 ..++..+.|+.+++|.+||..++.++++...++..+.++|+++|.+++.+|.|
T Consensus       170 ---------------------------~T~l~MniPftaihf~tYE~~~k~lnp~~~y~p~ih~i~GalaGa~Aaa~TTP  222 (302)
T KOG0760|consen  170 ---------------------------PTQLAMNIPFTAIHFMTYEFSQKFLNPQRKYNPLIHIIAGALAGALAAALTTP  222 (302)
T ss_pred             ---------------------------ceeeeecCccceeehhhHHHHHHhcCcccccCcHHHHHhhhhhHHHHHHhCCc
Confidence                                       88889999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHhcCCCCC-------ccccHHHHHHHHHHhcCccccccchhhhhhcccchhhHHHHhHHHHHhhhcccC
Q psy5922         254 LDVCKTFLNTQPTGQ-------AVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEKD  322 (323)
Q Consensus       254 ~d~vktr~q~~~~~~-------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~  322 (323)
                      +|+|||++|+|....       +.+++.+.+|.||+.+|++||+||+.+|++..+|.++|+|+.||.+|.++.+.+
T Consensus       223 LDvvKT~Lq~q~s~~~~~~~~~k~~gi~~a~R~Iy~~~G~~gf~rG~~~Rm~~~mPataIswS~yE~fK~~l~~~e  298 (302)
T KOG0760|consen  223 LDVVKTLLQTQGSSALSILIRRKASGISDAFRTIYQKHGVKGFFRGLKPRMVYNMPATAISWSVYETFKSFLIDVE  298 (302)
T ss_pred             HHHHHHHHHhhcchhhHHHHHHhhccHHHHHHHHHHhcCchhhhhcccceeeecCchhhhhHHHHHHHHHHHhccc
Confidence            999999999998653       789999999999999999999999999999999999999999999999987643



>KOG0764|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 9e-10
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-07
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 12/159 (7%) Query: 21 HLLAGASAGIMEHIIVYPLDTVKTQM-----QSLTRKSYKGIIESLQHMMTKEGILRPIR 75 +L +G +AG VYPLD +T++ + ++ + G+ + + +G+ + Sbjct: 115 NLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQ 174 Query: 76 GLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVV 135 G NV + G A YF Y+ K + + V+ +S+ A + T + + P D V Sbjct: 175 GFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTV-TAVAGLVSYPFDTV 233 Query: 136 KQRLQMY------DSPYKSVIDCILRVHAEEGLAAFFRS 168 ++R+ M D Y +DC ++ +EG AFF+ Sbjct: 234 RRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKG 272
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-40
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-19
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-11
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 2e-11
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-39
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-27
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-22
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  142 bits (360), Expect = 2e-40
 Identities = 63/325 (19%), Positives = 108/325 (33%), Gaps = 57/325 (17%)

Query: 18  VGIHLLAGASAGIMEHIIVYPLDTVKTQMQ----------SLTRKSYKGIIESLQHMMTK 67
           + +  L   +A  +  +I +PLDT K ++Q          +     Y+G++ ++  M+  
Sbjct: 1   MTVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRT 60

Query: 68  EGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGT---AGVIATIL 124
           EG      GL   +       ++    Y+  K F +     +E+   G+   AG     L
Sbjct: 61  EGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKG---SEHAGIGSRLLAGSTTGAL 117

Query: 125 HDAIHVPTDVVKQRLQMY-----DSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPF 179
             A+  PTDVVK R Q          Y+S ++    +  EEG+   ++            
Sbjct: 118 AVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWK------------ 165

Query: 180 HTSHFIAVHAEEGL-AAFFRSFTTQLVMNIPFHTSHFIAYEFAQN--LSNPNREYHALTH 236
                       G      R+                + Y+  ++  L           H
Sbjct: 166 ------------GTSPNVARNAIVNCAE--------LVTYDLIKDTLLKANLMTDDLPCH 205

Query: 237 IVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKAR 296
             S   AG     + +P+DV KT       GQ      +   ++    G   F+KG    
Sbjct: 206 FTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-YHSAGHCALTMLRKEGPRAFYKGFMPS 264

Query: 297 VLYTMPSTAICWSTYETFKHFLHEK 321
            L       + + TYE  K  L   
Sbjct: 265 FLRLGSWNVVMFVTYEQLKRALMAA 289


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query323
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=4.8e-55  Score=398.35  Aligned_cols=269  Identities=22%  Similarity=0.319  Sum_probs=248.4

Q ss_pred             HHHHHHHHHHHhHHhhcccHHHHHHHHhcccc----------CCCCcHHHHHHHHHHhhcccccccchhhHHhchhhhhh
Q psy5922          20 IHLLAGASAGIMEHIIVYPLDTVKTQMQSLTR----------KSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHA   89 (323)
Q Consensus        20 ~~~l~g~~a~~~~~~i~~Pld~ik~~~q~~~~----------~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~   89 (323)
                      .++++|++|++++.+++||||+||+|+|++..          ..|++.++++++++++||+++||||+.+++++.++..+
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   82 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS   82 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999754          25789999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHhhcccccCchhhhhhHHHHHHHHHhhhcccHHHHHHHHHhcCC-----CCCcHHHHHHHHHHhhchhh
Q psy5922          90 LYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDS-----PYKSVIDCILRVHAEEGLAA  164 (323)
Q Consensus        90 ~~f~~~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~~~~~~~Pld~vk~r~q~~~~-----~~~~~~~~~~~i~~~~G~~~  164 (323)
                      ++|.+||.+++.+.+.....+....+++|++|++++.++++|+|++|+|+|++..     +|++.++++++|+++||++|
T Consensus        83 i~f~~ye~~k~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~g  162 (303)
T 2lck_A           83 VRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRG  162 (303)
T ss_dssp             HTTTHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHhcCCcCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhh
Confidence            9999999999988765334677889999999999999999999999999999863     68999999999999999999


Q ss_pred             hhhhhchhhhcccCccchhhHHHhhhhhHHHHHhhhhhhhhcccCccchhHHhHHHhhhcCCCCC--CchhHHHHHHHHH
Q psy5922         165 FFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNR--EYHALTHIVSGGV  242 (323)
Q Consensus       165 lyrG~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~--~~~~~~~~~~g~~  242 (323)
                      ||||+                               .+++++++|+.+++|.+||.+++.+.+..  ..+....+++|++
T Consensus       163 lyrG~-------------------------------~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~  211 (303)
T 2lck_A          163 LWKGT-------------------------------SPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFG  211 (303)
T ss_dssp             HHHHH-------------------------------HHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHH
T ss_pred             hhCCc-------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence            99999                               99999999999999999999999876543  4556788999999


Q ss_pred             HHHHHHhhcchhhHHHHHHhcCCCCCccccHHHHHHHHHHhcCccccccchhhhhhcccchhhHHHHhHHHHHhhhcc
Q psy5922         243 AGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHE  320 (323)
Q Consensus       243 ag~~~~~it~P~d~vktr~q~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~~e~~~~~~~~  320 (323)
                      ||++++++++|+|+||+|||.+... .|+++++|+++|+++||++|||||+.++++|.+|.++++|.+||.+|+.+.+
T Consensus       212 ag~~~~~~~~P~dvvktrlq~~~~~-~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          212 AGFCTTVIASPVDVVKTRYMNSALG-QYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCSS-SCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHHHcCHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998653 5999999999999999999999999999999999999999999999998764



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 323
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-21
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-12
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-06
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 88.6 bits (218), Expect = 8e-21
 Identities = 55/309 (17%), Positives = 95/309 (30%), Gaps = 42/309 (13%)

Query: 21  HLLAGASAGIMEHIIVYPLDTVKTQMQS-------LTRKSYKGIIESLQHMMTKEGILRP 73
             LAG  A  +    V P++ VK  +Q           K YKGII+ +  +  ++G L  
Sbjct: 9   DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSF 68

Query: 74  IRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGT-----AGVIATILHDAI 128
            RG    +    P  AL F+  +  K         ++           +G  A       
Sbjct: 69  WRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCF 128

Query: 129 HVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVH 188
             P D  + RL                                          +    + 
Sbjct: 129 VYPLDFARTRLAAD-------------------------VGKGAAQREFTGLGNCITKIF 163

Query: 189 AEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAA 248
             +GL   ++ F   +   I +  ++F  Y+ A+ +    +  H +   +       VA 
Sbjct: 164 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAG 223

Query: 249 AVTTPLDVCKTFLNTQPTGQAV----SGLRNAITSVYALGGLAGFFKGTKARVLYTMPST 304
            V+ P D  +  +  Q   +      +G  +    +    G   FFKG  + VL  M   
Sbjct: 224 LVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG- 282

Query: 305 AICWSTYET 313
           A     Y+ 
Sbjct: 283 AFVLVLYDE 291


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query323
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=3.5e-50  Score=361.64  Aligned_cols=269  Identities=21%  Similarity=0.293  Sum_probs=245.3

Q ss_pred             cchhhHHHHHHHHHHHHhHHhhcccHHHHHHHHhcccc-------CCCCcHHHHHHHHHHhhcccccccchhhHHhchhh
Q psy5922          14 ESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTR-------KSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAP   86 (323)
Q Consensus        14 ~~~~~~~~~l~g~~a~~~~~~i~~Pld~ik~~~q~~~~-------~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~   86 (323)
                      ++.+++.++++|++|++++.+++||||+||+|+|++..       ..+++.++++++++++||+++||+|+.+.++...+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            35678999999999999999999999999999998764       45689999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHhhccccc-----CchhhhhhHHHHHHHHHhhhcccHHHHHHHHHhcC------CCCCcHHHHHHH
Q psy5922          87 AHALYFSSYEFTKYFVSNNFKV-----NENISYGTAGVIATILHDAIHVPTDVVKQRLQMYD------SPYKSVIDCILR  155 (323)
Q Consensus        87 ~~~~~f~~~~~~~~~~~~~~~~-----~~~~~~~~ag~~a~~~~~~~~~Pld~vk~r~q~~~------~~~~~~~~~~~~  155 (323)
                      ...++|..++.+++.+.+....     ......+.+|.+|++++.++++|+|++|+|+|.+.      +++.+..+++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~  161 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK  161 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHH
Confidence            9999999999999988766322     23456778999999999999999999999999974      357899999999


Q ss_pred             HHHhhchhhhhhhhchhhhcccCccchhhHHHhhhhhHHHHHhhhhhhhhcccCccchhHHhHHHhhhcCCCCCCchhHH
Q psy5922         156 VHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALT  235 (323)
Q Consensus       156 i~~~~G~~~lyrG~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~  235 (323)
                      ++++||+++||+|+                               .+++++++|+.+.+|..||.+++...+........
T Consensus       162 ~~~~~G~~~l~~G~-------------------------------~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~  210 (292)
T d1okca_         162 IFKSDGLRGLYQGF-------------------------------NVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIV  210 (292)
T ss_dssp             HHHHHCHHHHTTTH-------------------------------HHHHHHHHHHHHHHHHHHHHHHHSSCGGGCSCHHH
T ss_pred             hhhccchhhhhccc-------------------------------cccccceehHhhhhhhhccchhhhcccccccchHH
Confidence            99999999999999                               99999999999999999999999988887888889


Q ss_pred             HHHHHHHHHHHHHhhcchhhHHHHHHhcCCCCC----ccccHHHHHHHHHHhcCccccccchhhhhhcccchhhHHHHhH
Q psy5922         236 HIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQ----AVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTY  311 (323)
Q Consensus       236 ~~~~g~~ag~~~~~it~P~d~vktr~q~~~~~~----~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~~  311 (323)
                      .++++.+++.+++++++|+||||+|||.+....    .|.++++|+++++++||++|||||+.++++|.+| .+++|.+|
T Consensus       211 ~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~y  289 (292)
T d1okca_         211 SWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLY  289 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHh
Confidence            999999999999999999999999999987543    6889999999999999999999999999999766 68999999


Q ss_pred             HHH
Q psy5922         312 ETF  314 (323)
Q Consensus       312 e~~  314 (323)
                      |++
T Consensus       290 e~l  292 (292)
T d1okca_         290 DEI  292 (292)
T ss_dssp             HTC
T ss_pred             hcC
Confidence            974



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure