Psyllid ID: psy5922
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| 332376188 | 368 | unknown [Dendroctonus ponderosae] | 0.842 | 0.739 | 0.480 | 1e-81 | |
| 350420408 | 343 | PREDICTED: mitoferrin-1-like [Bombus imp | 0.863 | 0.813 | 0.514 | 2e-78 | |
| 340728109 | 343 | PREDICTED: mitoferrin-1-like [Bombus ter | 0.863 | 0.813 | 0.511 | 9e-78 | |
| 383856398 | 340 | PREDICTED: mitoferrin-1-like [Megachile | 0.866 | 0.823 | 0.5 | 8e-77 | |
| 289742605 | 381 | mitochondrial carrier protein mRS3/4 [Gl | 0.848 | 0.719 | 0.493 | 2e-75 | |
| 198451126 | 388 | GA18557 [Drosophila pseudoobscura pseudo | 0.863 | 0.719 | 0.484 | 2e-75 | |
| 195143969 | 388 | GL23880 [Drosophila persimilis] gi|19410 | 0.863 | 0.719 | 0.483 | 2e-75 | |
| 66550989 | 324 | PREDICTED: mitoferrin-1 isoform 2 [Apis | 0.866 | 0.864 | 0.493 | 3e-75 | |
| 50759536 | 308 | PREDICTED: mitoferrin-1 [Gallus gallus] | 0.848 | 0.889 | 0.484 | 4e-75 | |
| 327288470 | 383 | PREDICTED: mitoferrin-1-like [Anolis car | 0.848 | 0.715 | 0.484 | 5e-75 |
| >gi|332376188|gb|AEE63234.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/312 (48%), Positives = 206/312 (66%), Gaps = 40/312 (12%)
Query: 12 TLESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTRKSYKGIIESLQHMMTKEGIL 71
TL + VG H++AGA AGIMEH ++YPLD+VKT+MQSL GI+ +L +M+ +EG+L
Sbjct: 8 TLPTDHVGTHMIAGAIAGIMEHCLMYPLDSVKTRMQSLASTGSDGIVATLINMVKQEGLL 67
Query: 72 RPIRGLNVVIAGTAPAHALYFSSYE-----FTKYFVSNNFKVNENISYGTAGVIATILHD 126
RPIRG+ ++ G P+HALYFSSYE FT+ S+ + + YG AG ++T+LHD
Sbjct: 68 RPIRGMGAMVFGAGPSHALYFSSYEYLKETFTEMVPSSKYNT---LCYGGAGCLSTLLHD 124
Query: 127 AIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIA 186
+ P +VVKQR+QM +SPY+S++ C++ V+ +EG AAF+RS+TTQL MN+P
Sbjct: 125 GVMNPAEVVKQRMQMVNSPYRSIVSCLVNVYRKEGFAAFYRSYTTQLTMNVP-------- 176
Query: 187 VHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGV 246
F + HF+ YEFAQ ++N R Y+ H+ SG +AG V
Sbjct: 177 -----------------------FQSIHFMIYEFAQTVTNKERTYNPAAHMASGALAGAV 213
Query: 247 AAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAI 306
A+A+TTPLDVCKT LNTQ T QA +GL A+ +Y L G AG+F+G +AR++Y MPSTAI
Sbjct: 214 ASAITTPLDVCKTLLNTQQTPQA-AGLVQAMKLIYQLKGPAGYFRGMQARIMYQMPSTAI 272
Query: 307 CWSTYETFKHFL 318
CWSTYE FK+ L
Sbjct: 273 CWSTYEFFKYLL 284
|
Source: Dendroctonus ponderosae Species: Dendroctonus ponderosae Genus: Dendroctonus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350420408|ref|XP_003492498.1| PREDICTED: mitoferrin-1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340728109|ref|XP_003402372.1| PREDICTED: mitoferrin-1-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|383856398|ref|XP_003703696.1| PREDICTED: mitoferrin-1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|289742605|gb|ADD20050.1| mitochondrial carrier protein mRS3/4 [Glossina morsitans morsitans] | Back alignment and taxonomy information |
|---|
| >gi|198451126|ref|XP_001358253.2| GA18557 [Drosophila pseudoobscura pseudoobscura] gi|198131346|gb|EAL27391.2| GA18557 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
| >gi|195143969|ref|XP_002012969.1| GL23880 [Drosophila persimilis] gi|194101912|gb|EDW23955.1| GL23880 [Drosophila persimilis] | Back alignment and taxonomy information |
|---|
| >gi|66550989|ref|XP_625179.1| PREDICTED: mitoferrin-1 isoform 2 [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|50759536|ref|XP_417682.1| PREDICTED: mitoferrin-1 [Gallus gallus] | Back alignment and taxonomy information |
|---|
| >gi|327288470|ref|XP_003228949.1| PREDICTED: mitoferrin-1-like [Anolis carolinensis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| UNIPROTKB|F1NS09 | 325 | SLC25A37 "Uncharacterized prot | 0.520 | 0.516 | 0.505 | 3.6e-82 | |
| FB|FBgn0039561 | 379 | mfrn "mitoferrin" [Drosophila | 0.532 | 0.453 | 0.494 | 6.5e-81 | |
| UNIPROTKB|Q9NYZ2 | 338 | SLC25A37 "Mitoferrin-1" [Homo | 0.535 | 0.511 | 0.511 | 9.5e-80 | |
| RGD|1359361 | 338 | Slc25a37 "solute carrier famil | 0.535 | 0.511 | 0.511 | 1.5e-79 | |
| ZFIN|ZDB-GENE-040426-2125 | 376 | slc25a28 "solute carrier famil | 0.510 | 0.438 | 0.523 | 4.1e-79 | |
| UNIPROTKB|E1B7M3 | 338 | E1B7M3 "Uncharacterized protei | 0.535 | 0.511 | 0.488 | 4.6e-78 | |
| POMBASE|SPAC8C9.12c | 303 | SPAC8C9.12c "mitochondrial iro | 0.486 | 0.518 | 0.413 | 4.7e-50 | |
| ZFIN|ZDB-GENE-031118-202 | 332 | slc25a37 "solute carrier famil | 0.520 | 0.506 | 0.520 | 1e-45 | |
| MGI|MGI:2180509 | 364 | Slc25a28 "solute carrier famil | 0.547 | 0.486 | 0.494 | 5.7e-43 | |
| RGD|1584155 | 364 | Slc25a28 "solute carrier famil | 0.547 | 0.486 | 0.489 | 1.5e-42 |
| UNIPROTKB|F1NS09 SLC25A37 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 456 (165.6 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 88/174 (50%), Positives = 123/174 (70%)
Query: 18 VGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLT---RKSYKGIIESLQHMMTKEGILRPI 74
+G H+LAGA AGIMEH ++YP+D+VKT+MQSL + Y+ + E+L+ M+ EG RP+
Sbjct: 31 LGTHMLAGAVAGIMEHSVMYPVDSVKTRMQSLQPDPKAQYRSVYEALKKMVLTEGFWRPL 90
Query: 75 RGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKV--NENISYGTAGVIATILHDAIHVPT 132
RG+NV + G PAHA+YF+ YE K +S+ + N +++ G AG +AT+LHDA+ P
Sbjct: 91 RGINVTMLGAGPAHAMYFACYEKMKKSLSDTIQHGGNSHLANGIAGSVATLLHDAVMNPA 150
Query: 133 D-VVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFI 185
+ VVKQR+QM++SPYKSV C+ V EG AF+RS+TTQL MN+PF HFI
Sbjct: 151 EAVVKQRMQMFNSPYKSVWQCVRTVQKTEGFGAFYRSYTTQLTMNVPFQAIHFI 204
|
|
| FB|FBgn0039561 mfrn "mitoferrin" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9NYZ2 SLC25A37 "Mitoferrin-1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|1359361 Slc25a37 "solute carrier family 25 (mitochondrial iron transporter), member 37" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-2125 slc25a28 "solute carrier family 25, member 28" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1B7M3 E1B7M3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPAC8C9.12c SPAC8C9.12c "mitochondrial iron ion transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-031118-202 slc25a37 "solute carrier family 25, member 37" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2180509 Slc25a28 "solute carrier family 25, member 28" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1584155 Slc25a28 "solute carrier family 25 (mitochondrial iron transporter), member 28" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 3e-21 | |
| PTZ00168 | 259 | PTZ00168, PTZ00168, mitochondrial carrier protein; | 1e-19 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 4e-19 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 4e-15 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 8e-12 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 9e-06 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 8e-04 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 3e-21
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 18 VGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLT---RKSYKGIIESLQHMMTKEGILRPI 74
LLAG AG + + YPLD VKT++QS + YKGI++ + + +EGI
Sbjct: 5 FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64
Query: 75 RGLNVVIAGTAPAHALYFSSYEFTK 99
+GL + APA A+YF +YE K
Sbjct: 65 KGLLPNLLRVAPAAAIYFGTYETLK 89
|
Length = 96 |
| >gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| KOG0760|consensus | 302 | 100.0 | ||
| KOG0764|consensus | 299 | 100.0 | ||
| KOG0752|consensus | 320 | 100.0 | ||
| KOG0758|consensus | 297 | 100.0 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0762|consensus | 311 | 100.0 | ||
| KOG0753|consensus | 317 | 100.0 | ||
| KOG0754|consensus | 294 | 100.0 | ||
| KOG0759|consensus | 286 | 100.0 | ||
| KOG0757|consensus | 319 | 100.0 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0761|consensus | 361 | 100.0 | ||
| KOG0751|consensus | 694 | 100.0 | ||
| KOG0768|consensus | 323 | 100.0 | ||
| KOG0766|consensus | 297 | 100.0 | ||
| KOG0755|consensus | 320 | 100.0 | ||
| KOG0756|consensus | 299 | 100.0 | ||
| KOG0770|consensus | 353 | 100.0 | ||
| KOG0749|consensus | 298 | 100.0 | ||
| KOG0036|consensus | 463 | 100.0 | ||
| KOG0765|consensus | 333 | 100.0 | ||
| KOG0769|consensus | 308 | 100.0 | ||
| KOG0763|consensus | 301 | 100.0 | ||
| KOG0750|consensus | 304 | 100.0 | ||
| KOG0767|consensus | 333 | 100.0 | ||
| KOG0764|consensus | 299 | 100.0 | ||
| KOG0752|consensus | 320 | 100.0 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0753|consensus | 317 | 99.98 | ||
| KOG0760|consensus | 302 | 99.97 | ||
| KOG0762|consensus | 311 | 99.96 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.96 | |
| KOG0757|consensus | 319 | 99.96 | ||
| KOG0754|consensus | 294 | 99.96 | ||
| KOG0759|consensus | 286 | 99.96 | ||
| KOG0768|consensus | 323 | 99.96 | ||
| KOG0761|consensus | 361 | 99.95 | ||
| KOG0758|consensus | 297 | 99.95 | ||
| KOG0770|consensus | 353 | 99.94 | ||
| KOG1519|consensus | 297 | 99.93 | ||
| KOG0755|consensus | 320 | 99.92 | ||
| KOG0767|consensus | 333 | 99.92 | ||
| KOG0751|consensus | 694 | 99.91 | ||
| KOG0036|consensus | 463 | 99.91 | ||
| KOG0769|consensus | 308 | 99.9 | ||
| KOG0765|consensus | 333 | 99.9 | ||
| KOG0750|consensus | 304 | 99.9 | ||
| KOG0756|consensus | 299 | 99.9 | ||
| KOG0763|consensus | 301 | 99.89 | ||
| KOG0749|consensus | 298 | 99.89 | ||
| KOG0766|consensus | 297 | 99.89 | ||
| KOG2745|consensus | 321 | 99.84 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.78 | |
| KOG2954|consensus | 427 | 99.77 | ||
| KOG1519|consensus | 297 | 99.61 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.6 | |
| KOG2745|consensus | 321 | 99.43 | ||
| KOG2954|consensus | 427 | 98.58 |
| >KOG0760|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-56 Score=375.67 Aligned_cols=276 Identities=52% Similarity=0.883 Sum_probs=261.3
Q ss_pred hhhHHHHHHHHHHHHhHHhhcccHHHHHHHHhcccc--CCCCcHHHHHHHHHHhhcccccccchhhHHhchhhhhhhhHH
Q psy5922 16 KQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTR--KSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHALYFS 93 (323)
Q Consensus 16 ~~~~~~~l~g~~a~~~~~~i~~Pld~ik~~~q~~~~--~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~f~ 93 (323)
.+..+++++|++||+++..+++|+|.||+|||+-.. .+..++.+.+++|.+.||+..+|||+...+++..|..+++|.
T Consensus 14 ~~~~~~l~AGa~aGi~EH~vMfPvDtvKTrmQsl~~~~~~~~~i~~~~~~i~~~EG~~a~~RGv~avilGagPAHalYFs 93 (302)
T KOG0760|consen 14 SPVYQHLTAGAFAGILEHSVMFPVDTVKTRMQSLGPPPAKSKNIVSALRKISTTEGLLALYRGVSAVILGAGPAHALYFS 93 (302)
T ss_pred CcHHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCccccccHHHHHHHHHhhcchHhhhcchhHHHhcCCchhhhhHH
Confidence 448999999999999999999999999999998664 345889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccCchhhhhhHHHHHHHHHhhhcccHHHHHHHHHhcCCCCCcHHHHHHHHHHhhchhhhhhhhchhh
Q psy5922 94 SYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQL 173 (323)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~~~~~~~Pld~vk~r~q~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~i 173 (323)
+||..|+.+......+..+...++|++|.++.+.+.+|+|+||.|||+...+|+++++|+++++++||+.+|||++
T Consensus 94 ~YE~~K~~l~~~~~~n~~la~aisG~~At~~sDAvm~P~dvVKQR~Qm~~~~y~sv~~ci~~v~r~EGl~AFYrsY---- 169 (302)
T KOG0760|consen 94 TYEFMKRRLNASFDRNNPLAYAISGACATLISDAVMNPFDVVKQRMQMYNSPYKSVWDCIRTVYRNEGLGAFYRSY---- 169 (302)
T ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccCCCccHHHHHHHHHHhcchhHhhhcc----
Confidence 9999999998775557789999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCccchhhHHHhhhhhHHHHHhhhhhhhhcccCccchhHHhHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHhhcch
Q psy5922 174 VMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAAAVTTP 253 (323)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~it~P 253 (323)
..++..+.|+.+++|.+||..++.++++...++..+.++|+++|.+++.+|.|
T Consensus 170 ---------------------------~T~l~MniPftaihf~tYE~~~k~lnp~~~y~p~ih~i~GalaGa~Aaa~TTP 222 (302)
T KOG0760|consen 170 ---------------------------PTQLAMNIPFTAIHFMTYEFSQKFLNPQRKYNPLIHIIAGALAGALAAALTTP 222 (302)
T ss_pred ---------------------------ceeeeecCccceeehhhHHHHHHhcCcccccCcHHHHHhhhhhHHHHHHhCCc
Confidence 88889999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCC-------ccccHHHHHHHHHHhcCccccccchhhhhhcccchhhHHHHhHHHHHhhhcccC
Q psy5922 254 LDVCKTFLNTQPTGQ-------AVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHEKD 322 (323)
Q Consensus 254 ~d~vktr~q~~~~~~-------~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~~e~~~~~~~~~~ 322 (323)
+|+|||++|+|.... +.+++.+.+|.||+.+|++||+||+.+|++..+|.++|+|+.||.+|.++.+.+
T Consensus 223 LDvvKT~Lq~q~s~~~~~~~~~k~~gi~~a~R~Iy~~~G~~gf~rG~~~Rm~~~mPataIswS~yE~fK~~l~~~e 298 (302)
T KOG0760|consen 223 LDVVKTLLQTQGSSALSILIRRKASGISDAFRTIYQKHGVKGFFRGLKPRMVYNMPATAISWSVYETFKSFLIDVE 298 (302)
T ss_pred HHHHHHHHHhhcchhhHHHHHHhhccHHHHHHHHHHhcCchhhhhcccceeeecCchhhhhHHHHHHHHHHHhccc
Confidence 999999999998653 789999999999999999999999999999999999999999999999987643
|
|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 323 | ||||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 9e-10 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 2e-07 |
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
|
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-40 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 3e-19 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 1e-11 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 2e-11 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 3e-39 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 3e-27 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 6e-22 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 2e-40
Identities = 63/325 (19%), Positives = 108/325 (33%), Gaps = 57/325 (17%)
Query: 18 VGIHLLAGASAGIMEHIIVYPLDTVKTQMQ----------SLTRKSYKGIIESLQHMMTK 67
+ + L +A + +I +PLDT K ++Q + Y+G++ ++ M+
Sbjct: 1 MTVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRT 60
Query: 68 EGILRPIRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGT---AGVIATIL 124
EG GL + ++ Y+ K F + +E+ G+ AG L
Sbjct: 61 EGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKG---SEHAGIGSRLLAGSTTGAL 117
Query: 125 HDAIHVPTDVVKQRLQMY-----DSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPF 179
A+ PTDVVK R Q Y+S ++ + EEG+ ++
Sbjct: 118 AVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWK------------ 165
Query: 180 HTSHFIAVHAEEGL-AAFFRSFTTQLVMNIPFHTSHFIAYEFAQN--LSNPNREYHALTH 236
G R+ + Y+ ++ L H
Sbjct: 166 ------------GTSPNVARNAIVNCAE--------LVTYDLIKDTLLKANLMTDDLPCH 205
Query: 237 IVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKAR 296
S AG + +P+DV KT GQ + ++ G F+KG
Sbjct: 206 FTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ-YHSAGHCALTMLRKEGPRAFYKGFMPS 264
Query: 297 VLYTMPSTAICWSTYETFKHFLHEK 321
L + + TYE K L
Sbjct: 265 FLRLGSWNVVMFVTYEQLKRALMAA 289
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-55 Score=398.35 Aligned_cols=269 Identities=22% Similarity=0.319 Sum_probs=248.4
Q ss_pred HHHHHHHHHHHhHHhhcccHHHHHHHHhcccc----------CCCCcHHHHHHHHHHhhcccccccchhhHHhchhhhhh
Q psy5922 20 IHLLAGASAGIMEHIIVYPLDTVKTQMQSLTR----------KSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAPAHA 89 (323)
Q Consensus 20 ~~~l~g~~a~~~~~~i~~Pld~ik~~~q~~~~----------~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~ 89 (323)
.++++|++|++++.+++||||+||+|+|++.. ..|++.++++++++++||+++||||+.+++++.++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999754 25789999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhcccccCchhhhhhHHHHHHHHHhhhcccHHHHHHHHHhcCC-----CCCcHHHHHHHHHHhhchhh
Q psy5922 90 LYFSSYEFTKYFVSNNFKVNENISYGTAGVIATILHDAIHVPTDVVKQRLQMYDS-----PYKSVIDCILRVHAEEGLAA 164 (323)
Q Consensus 90 ~~f~~~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~~~~~~~Pld~vk~r~q~~~~-----~~~~~~~~~~~i~~~~G~~~ 164 (323)
++|.+||.+++.+.+.....+....+++|++|++++.++++|+|++|+|+|++.. +|++.++++++|+++||++|
T Consensus 83 i~f~~ye~~k~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~g 162 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRG 162 (303)
T ss_dssp HTTTHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHhcCCcCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhh
Confidence 9999999999988765334677889999999999999999999999999999863 68999999999999999999
Q ss_pred hhhhhchhhhcccCccchhhHHHhhhhhHHHHHhhhhhhhhcccCccchhHHhHHHhhhcCCCCC--CchhHHHHHHHHH
Q psy5922 165 FFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNR--EYHALTHIVSGGV 242 (323)
Q Consensus 165 lyrG~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~--~~~~~~~~~~g~~ 242 (323)
||||+ .+++++++|+.+++|.+||.+++.+.+.. ..+....+++|++
T Consensus 163 lyrG~-------------------------------~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ 211 (303)
T 2lck_A 163 LWKGT-------------------------------SPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFG 211 (303)
T ss_dssp HHHHH-------------------------------HHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHH
T ss_pred hhCCc-------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence 99999 99999999999999999999999876543 4556788999999
Q ss_pred HHHHHHhhcchhhHHHHHHhcCCCCCccccHHHHHHHHHHhcCccccccchhhhhhcccchhhHHHHhHHHHHhhhcc
Q psy5922 243 AGGVAAAVTTPLDVCKTFLNTQPTGQAVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTYETFKHFLHE 320 (323)
Q Consensus 243 ag~~~~~it~P~d~vktr~q~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~~e~~~~~~~~ 320 (323)
||++++++++|+|+||+|||.+... .|+++++|+++|+++||++|||||+.++++|.+|.++++|.+||.+|+.+.+
T Consensus 212 ag~~~~~~~~P~dvvktrlq~~~~~-~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~ 288 (303)
T 2lck_A 212 AGFCTTVIASPVDVVKTRYMNSALG-QYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA 288 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSS-SCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHcCHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998653 5999999999999999999999999999999999999999999999998764
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 323 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 8e-21 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 2e-12 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 3e-06 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 88.6 bits (218), Expect = 8e-21
Identities = 55/309 (17%), Positives = 95/309 (30%), Gaps = 42/309 (13%)
Query: 21 HLLAGASAGIMEHIIVYPLDTVKTQMQS-------LTRKSYKGIIESLQHMMTKEGILRP 73
LAG A + V P++ VK +Q K YKGII+ + + ++G L
Sbjct: 9 DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSF 68
Query: 74 IRGLNVVIAGTAPAHALYFSSYEFTKYFVSNNFKVNENISYGT-----AGVIATILHDAI 128
RG + P AL F+ + K ++ +G A
Sbjct: 69 WRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCF 128
Query: 129 HVPTDVVKQRLQMYDSPYKSVIDCILRVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVH 188
P D + RL + +
Sbjct: 129 VYPLDFARTRLAAD-------------------------VGKGAAQREFTGLGNCITKIF 163
Query: 189 AEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALTHIVSGGVAGGVAA 248
+GL ++ F + I + ++F Y+ A+ + + H + + VA
Sbjct: 164 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAG 223
Query: 249 AVTTPLDVCKTFLNTQPTGQAV----SGLRNAITSVYALGGLAGFFKGTKARVLYTMPST 304
V+ P D + + Q + +G + + G FFKG + VL M
Sbjct: 224 LVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGG- 282
Query: 305 AICWSTYET 313
A Y+
Sbjct: 283 AFVLVLYDE 291
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 100.0 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.96 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00 E-value=3.5e-50 Score=361.64 Aligned_cols=269 Identities=21% Similarity=0.293 Sum_probs=245.3
Q ss_pred cchhhHHHHHHHHHHHHhHHhhcccHHHHHHHHhcccc-------CCCCcHHHHHHHHHHhhcccccccchhhHHhchhh
Q psy5922 14 ESKQVGIHLLAGASAGIMEHIIVYPLDTVKTQMQSLTR-------KSYKGIIESLQHMMTKEGILRPIRGLNVVIAGTAP 86 (323)
Q Consensus 14 ~~~~~~~~~l~g~~a~~~~~~i~~Pld~ik~~~q~~~~-------~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~ 86 (323)
++.+++.++++|++|++++.+++||||+||+|+|++.. ..+++.++++++++++||+++||+|+.+.++...+
T Consensus 2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~ 81 (292)
T d1okca_ 2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP 81 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence 35678999999999999999999999999999998764 45689999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHhhccccc-----CchhhhhhHHHHHHHHHhhhcccHHHHHHHHHhcC------CCCCcHHHHHHH
Q psy5922 87 AHALYFSSYEFTKYFVSNNFKV-----NENISYGTAGVIATILHDAIHVPTDVVKQRLQMYD------SPYKSVIDCILR 155 (323)
Q Consensus 87 ~~~~~f~~~~~~~~~~~~~~~~-----~~~~~~~~ag~~a~~~~~~~~~Pld~vk~r~q~~~------~~~~~~~~~~~~ 155 (323)
...++|..++.+++.+.+.... ......+.+|.+|++++.++++|+|++|+|+|.+. +++.+..+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~ 161 (292)
T d1okca_ 82 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK 161 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHH
Confidence 9999999999999988766322 23456778999999999999999999999999974 357899999999
Q ss_pred HHHhhchhhhhhhhchhhhcccCccchhhHHHhhhhhHHHHHhhhhhhhhcccCccchhHHhHHHhhhcCCCCCCchhHH
Q psy5922 156 VHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAVHAEEGLAAFFRSFTTQLVMNIPFHTSHFIAYEFAQNLSNPNREYHALT 235 (323)
Q Consensus 156 i~~~~G~~~lyrG~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ye~~~~~~~~~~~~~~~~ 235 (323)
++++||+++||+|+ .+++++++|+.+.+|..||.+++...+........
T Consensus 162 ~~~~~G~~~l~~G~-------------------------------~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 210 (292)
T d1okca_ 162 IFKSDGLRGLYQGF-------------------------------NVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIV 210 (292)
T ss_dssp HHHHHCHHHHTTTH-------------------------------HHHHHHHHHHHHHHHHHHHHHHHSSCGGGCSCHHH
T ss_pred hhhccchhhhhccc-------------------------------cccccceehHhhhhhhhccchhhhcccccccchHH
Confidence 99999999999999 99999999999999999999999988887888889
Q ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHhcCCCCC----ccccHHHHHHHHHHhcCccccccchhhhhhcccchhhHHHHhH
Q psy5922 236 HIVSGGVAGGVAAAVTTPLDVCKTFLNTQPTGQ----AVSGLRNAITSVYALGGLAGFFKGTKARVLYTMPSTAICWSTY 311 (323)
Q Consensus 236 ~~~~g~~ag~~~~~it~P~d~vktr~q~~~~~~----~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~i~~~~~ 311 (323)
.++++.+++.+++++++|+||||+|||.+.... .|.++++|+++++++||++|||||+.++++|.+| .+++|.+|
T Consensus 211 ~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~y 289 (292)
T d1okca_ 211 SWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLY 289 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHh
Confidence 999999999999999999999999999987543 6889999999999999999999999999999766 68999999
Q ss_pred HHH
Q psy5922 312 ETF 314 (323)
Q Consensus 312 e~~ 314 (323)
|++
T Consensus 290 e~l 292 (292)
T d1okca_ 290 DEI 292 (292)
T ss_dssp HTC
T ss_pred hcC
Confidence 974
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|