Psyllid ID: psy5930
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 2426 | 2.2.26 [Sep-21-2011] | |||||||
| Q9Y4A5 | 3859 | Transformation/transcript | yes | N/A | 0.977 | 0.614 | 0.474 | 0.0 | |
| Q8I8U7 | 3803 | Transcription-associated | no | N/A | 0.948 | 0.605 | 0.456 | 0.0 | |
| Q80YV3 | 2565 | Transformation/transcript | no | N/A | 0.600 | 0.567 | 0.435 | 0.0 | |
| P38811 | 3744 | Transcription-associated | yes | N/A | 0.929 | 0.602 | 0.248 | 1e-172 | |
| Q10064 | 3655 | Uncharacterized PI3/PI4-k | yes | N/A | 0.478 | 0.317 | 0.283 | 1e-110 | |
| Q9HFE8 | 3699 | Transcription-associated | no | N/A | 0.475 | 0.311 | 0.255 | 2e-86 | |
| Q54T85 | 4582 | Probable transcription-as | yes | N/A | 0.356 | 0.188 | 0.260 | 1e-58 |
| >sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 2281 bits (5910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1201/2531 (47%), Positives = 1660/2531 (65%), Gaps = 160/2531 (6%)
Query: 1 MSQLFEEDFQLGSGWTTHESLRPLVYSTLADLVHHVRQLLPMSDLIKAVHLFSKNIHDET 60
M +LF+E +GSG+T E+LRPL YSTLADLVHHVRQ LP+SDL AV LF+KNI DE+
Sbjct: 351 MDKLFDESILIGSGYTARETLRPLAYSTLADLVHHVRQHLPLSDLSLAVQLFAKNIDDES 410
Query: 61 LPTTIHTMSCKLLLNLVDFIRTKNQAEIEQGRIGDNIGQELLERMLETMVLKFKTIAKLQ 120
LP++I TMSCKLLLNLVD IR+K++ E GR ++L RMLE VLKF TIA+ Q
Sbjct: 411 LPSSIQTMSCKLLLNLVDCIRSKSEQESGNGR-------DVLMRMLEVFVLKFHTIARYQ 463
Query: 121 LPVLTAKAKTQLALPAPE--LPSTTEDVKPVVNPQTNLIDSPAKTTAG------------ 166
L + K K Q L A E LP +
Sbjct: 464 LSAIFKKCKPQSELGAVEAALPGVPTAPAAPGPAPSPAPVPAPPPPPPPPPPATPVTPAP 523
Query: 167 ---VEKQKPKLGISNSPAANYNVNDCRSIVKILICGVKTVTMGLAASKVNASGGEGPTTP 223
EKQ K + V DCRS+VK L+CGVKT+T G+ + K + GE P
Sbjct: 524 VPPFEKQGEK---DKEDKQTFQVTDCRSLVKTLVCGVKTITWGITSCK---APGEAQFIP 577
Query: 224 PFGQFQPKDTKVYIRLVKWALKALDVYTLNPSSSSLLPNNLQRTPLQQASRTKEEKEVLE 283
Q QPK+T++YI+LVK+A++ALD+Y + + + R Q R KEEKEVLE
Sbjct: 578 N-KQLQPKETQIYIKLVKYAMQALDIYQVQIAGNG---QTYIRVANCQTVRMKEEKEVLE 633
Query: 284 HFAGVFSLMTPQTFREIFASTIDYMVDRMAHNYTLQVISNSFLVTRDTSPVFATVLVEYL 343
HFAGVF++M P TF+EIF +T+ YMV+R++ NY LQ+++NSFL TS +FAT+LVEYL
Sbjct: 634 HFAGVFTMMNPLTFKEIFQTTVPYMVERISKNYALQIVANSFLANPTTSALFATILVEYL 693
Query: 344 LEHMEEMGNGNVERSNLCLKLFKLVFGSVSFYPAENEHMLRPHLHQIVNRSMELAMTAKE 403
L+ + EMG+ NVE SNL LKLFKLVFGSVS + AENE ML+PHLH+IVN SMELA TAKE
Sbjct: 694 LDRLPEMGS-NVELSNLYLKLFKLVFGSVSLFAAENEQMLKPHLHKIVNSSMELAQTAKE 752
Query: 404 PYNYFLLLRALFRSIGGGSHDLLYQEFLPLLRNLLQGLNSLQSGLHKQQMKDLFVELCLT 463
PYNYFLLLRALFRSIGGGSHDLLYQEFLPLL NLLQGLN LQSGLHKQ MKDLFVELCLT
Sbjct: 753 PYNYFLLLRALFRSIGGGSHDLLYQEFLPLLPNLLQGLNMLQSGLHKQHMKDLFVELCLT 812
Query: 464 VPVRLSSLLPYLPMLMDPLVSALNGSSTLISQGLRTLELCVDNLQPDFLYDHIQPVRADL 523
VPVRLSSLLPYLPMLMDPLVSALNGS TL+SQGLRTLELCVDNLQPDFLYDHIQPVRA+L
Sbjct: 813 VPVRLSSLLPYLPMLMDPLVSALNGSQTLVSQGLRTLELCVDNLQPDFLYDHIQPVRAEL 872
Query: 524 MQALWRSLRSPNEQVAHVAYRVLGKFGGGNRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQ 583
MQALWR+LR+P + ++HVAYRVLGKFGG NRKM+ E QKL Y + GP++ V F + +
Sbjct: 873 MQALWRTLRNPADSISHVAYRVLGKFGGSNRKMLKESQKLHYVVTEVQGPSITVEFSDCK 932
Query: 584 KTINLSVEKAIDVAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLSDNRSTIQKLFSHPS 643
++ L +EKAI+ A+ LK+ + +YR+Q W+V+K ++++ M+L DN+ + +L +HP+
Sbjct: 933 ASLQLPMEKAIETALDCLKSANTEPYYRRQAWEVIKCFLVAMMSLEDNKHALYQLLAHPN 992
Query: 644 FGNTESSQGTM-----YKYADPTIRNTHQNALTGIFMVYLIKELRKDSLLYTVLVVRHYT 698
F TE + + YK D R T + ALTG FM +IK+LR +L + ++RHYT
Sbjct: 993 F--TEKTIPNVIISHRYKAQDTPARKTFEQALTGAFMSAVIKDLRPSALPFVASLIRHYT 1050
Query: 699 LVAITQQTGPF--PLYG-----KSALLEGT------MDPLVLIDAIAVILGHEDKELCKP 745
+VA+ QQ GPF P Y +A+ MDPLVLIDAIA+ + +E+KELCK
Sbjct: 1051 MVAVAQQCGPFLLPCYQVGSQPSTAMFHSEENGSKGMDPLVLIDAIAICMAYEEKELCKI 1110
Query: 746 GYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNT 805
G +AL I + A+ I GS E AC LPL Y+ ER+C CYE+AWYAKLGG +IKF
Sbjct: 1111 GEVALAVIFDVASIILGSKERACQLPLFSYIVERLCACCYEQAWYAKLGGVVSIKFLMER 1170
Query: 806 MAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETL 865
+ + WV + F+KALLFVMMDLTGEVS+GA+ A+ L+QL++ CATP+K+ AE +
Sbjct: 1171 LPLTWVLQNQQTFLKALLFVMMDLTGEVSNGAVAMAKTTLEQLLMRCATPLKDEERAEEI 1230
Query: 866 -TVQSKALSEVTNELTRNITLPNDLLREQSMYLLQVFAETQGKSVVQVMEPHKDVLADII 924
Q K+ VT++L R +T PN +R+Q+M+ LQV A+ GKSV +MEPHK+VL D++
Sbjct: 1231 VAAQEKSFHHVTHDLVREVTSPNSTVRKQAMHSLQVLAQVTGKSVTVIMEPHKEVLQDMV 1290
Query: 925 PPKKLLIRNHSANAQIGLMEGNTFCQSLTPRLFTTDMSIHEHSSFFQEITNICESSDQAL 984
PPKK L+R+ ANAQIGLMEGNTFC +L PRLFT D+++ EH F+ E+ N+CE+ D AL
Sbjct: 1291 PPKKHLLRHQPANAQIGLMEGNTFCTTLQPRLFTMDLNVVEHKVFYTELLNLCEAEDSAL 1350
Query: 985 MKLPCYKPISSLVPLRKAAMRALASWHYVPNCSQKIFNTLFAALERPNPELQEAAFQAMK 1044
KLPCYK + SLVPLR AA+ ALA+ +Y+P +KI LF AL N ELQEA M+
Sbjct: 1351 TKLPCYKSLPSLVPLRIAALNALAACNYLPQSREKIIAALFKALNSTNSELQEAGEACMR 1410
Query: 1045 TFVNGSPIDLKSVYEVMKPLLLTLGDYRNLNLVTARKLSYIVQPFPSSFSEKLCEQLLVN 1104
F+ G+ I++ ++ M+PLL+ LGDYR+L L +L+ + + FP+SF++K C+Q++ +
Sbjct: 1411 KFLEGATIEVDQIHTHMRPLLMMLGDYRSLTLNVVNRLTSVTRLFPNSFNDKFCDQMMQH 1470
Query: 1105 LKNLFENIVAQKENPPKNSETE-------------------KIIVVIIGIFKESPAAKAQ 1145
L+ E +V + ++ E KI II +F PAA
Sbjct: 1471 LRKWMEVVVITHKGGQRSDGNESISECGRCPLSPFCQFEEMKICSAIINLFHLIPAAPQT 1530
Query: 1146 FIEPLISLILENEHALSIGPYSPYREPLVKYLLRYPTETLQSMLSEIHMKDPLWRNFFVY 1205
++PL+ ++++ E A+ I SP+REPL+K+L R+P++T++ + E + DP W F+
Sbjct: 1531 LVKPLLEVVMKTERAMLIEAGSPFREPLIKFLTRHPSQTVELFMMEATLNDPQWSRMFMS 1590
Query: 1206 LIKHQEGKCFRDALQTQFVDRLILYTF-----SAINPNCTNLTTAEKLEMQYIGIRLVSI 1260
+KH++ + RD L +R I +A+ P + +T +L++Q+ I+++SI
Sbjct: 1591 FLKHKDARPLRDVLAAN-PNRFITLLLPGGAQTAVRPGSPSTSTM-RLDLQFQAIKIISI 1648
Query: 1261 LIKLDTKWLSSQNQLISVMQKIWCDDEYLQRHRNVENISYVHWKEPKLLVKILLHYFSHH 1320
++K D WL+SQ+ L+S ++++W + + +RHR EN++ +WKEPKLL LL+Y +
Sbjct: 1649 IVKNDDSWLASQHSLVSQLRRVWVSENFQERHRK-ENMAATNWKEPKLLAYCLLNYCKRN 1707
Query: 1321 RHIIDLLFFILRAVTERLLPDFTFLREFLETTVAQTYSIEWKRKAFLRFLELFKLALVSQ 1380
I+LLF +LRA T R L + TFL+E++E + + YSI KR F RF++ F
Sbjct: 1708 YGDIELLFQLLRAFTGRFLCNMTFLKEYMEEEIPKNYSIAQKRALFFRFVD-FNDPNFGD 1766
Query: 1381 ELKAKILQLVLIPCLTVCFERGEGDKLIGGTGLPEDEDNKNANLVNEFIAKIISPITESP 1440
ELKAK+LQ +L P FE+GEG++L+G P E + ++ + FI K++ P ++
Sbjct: 1767 ELKAKVLQHILNPAFLYSFEKGEGEQLLGP---PNPEGDNPESITSVFITKVLDPEKQAD 1823
Query: 1441 PVFVISDNVRILLLQMCCLIVEQSYHYVYNVSQGKILVNKAKPLIMFAWQLSLLGKNFVD 1500
+ D++RI LLQ L+VE + H++++ ++ + +K + L+ FAW LL K VD
Sbjct: 1824 ----MLDSLRIYLLQYATLLVEHAPHHIHDNNKNR--NSKLRRLMTFAWP-CLLSKACVD 1876
Query: 1501 PATRYHGHLLLAHMIAKFGVSQRVVVQVFLGLLRAHASEVRPIVRQALEILTPAFPGRVD 1560
PA +Y GHLLLAH+IAKF + +++V+QVF LL+AHA E R IVRQA+ ILTPA P R++
Sbjct: 1877 PACKYSGHLLLAHIIAKFAIHKKIVLQVFHSLLKAHAMEARAIVRQAMAILTPAVPARME 1936
Query: 1561 DGQRMLLVYTKKILVEEGHSNPQLSHVLTLIVKHYKVYYPVRHGLIQQMIASMQRLGFSS 1620
DG +ML +T+KI+VEEGH+ PQL H+L LIV+H+KVYYPVRH L+Q M+++MQRLGF+
Sbjct: 1937 DGHQMLTHWTRKIIVEEGHTVPQLVHILHLIVQHFKVYYPVRHHLVQHMVSAMQRLGFTP 1996
Query: 1621 S-AMDHKKLSVELADVIIKWELQRVKEEAEGTS--------GGKAIQEPPRKKMALESF- 1670
S ++ ++L+V+L++V+IKWELQR+K++ + G ++ ++ ++++S
Sbjct: 1997 SVTIEQRRLAVDLSEVVIKWELQRIKDQQPDSDMDPNSSGEGVNSVSSSIKRGLSVDSAQ 2056
Query: 1671 -------APGESSMKY----DIPTA----SKPIEKVHADAVINFLARLSCQVSDLPPNLS 1715
A G S + +P A +KPI+K H D V+NFL R++CQV+D
Sbjct: 2057 EVKRFRTATGAISAVFGRSQSLPGADSLLAKPIDKQHTDTVVNFLIRVACQVND------ 2110
Query: 1716 SSMQSQVIQTPGEMLARRCVSLIRMALKPEVWSHQNTEFKLTWLDKVLSSIDQPT-ANLG 1774
+ +PGE+L+RRCV+L++ AL+P++W +E KL W DK+L +++QP N G
Sbjct: 2111 ---NTNTAGSPGEVLSRRCVNLLKTALRPDMWP--KSELKLQWFDKLLMTVEQPNQVNYG 2165
Query: 1775 NISIALELLTLLITILDEGQILHIIKPLQRGLVACISSSITKVIRLVHALLCRLMSTFPT 1834
NI LE+L+ L+T+L IL KPLQRG+ AC++ TKV+R VH+LL RLMS FPT
Sbjct: 2166 NICTGLEVLSFLLTVLQSPAILSSFKPLQRGIAACMTCGNTKVLRAVHSLLSRLMSIFPT 2225
Query: 1835 EPISSNVASKREELDHLYVCVSKVIYEGLSNYEKNPTATCSTLYGTVMMLKAACMNHPAY 1894
EP +S+VASK EEL+ LY V KVIYEGL+NYEK A S L+GT+M+LK+AC N+P+Y
Sbjct: 2226 EPSTSSVASKYEELECLYAAVGKVIYEGLTNYEKATNANPSQLFGTLMILKSACSNNPSY 2285
Query: 1895 VDRFILEFMRVIQRMAREHI---ATSTADAPQQVGGELLIYCLDLVKTRFCSMSQETRKQ 1951
+DR I FMR +Q+M REH+ A S + EL++ L+LVKTR MS E RK
Sbjct: 2286 IDRLISVFMRSLQKMVREHLNPQAASGSTEATSGTSELVMLSLELVKTRLAVMSMEMRKN 2345
Query: 1952 FIGTIILGLIDKTPDIKVMKAIIKMTEEWLKVNK-VEQNNVPNLKEKCIILVKLMHFVEK 2010
FI I+ LI+K+PD K+++A++K+ EEW+K N + N P L+EK I+LVK+M ++EK
Sbjct: 2346 FIQAILTSLIEKSPDAKILRAVVKIVEEWVKNNSPMAANQTPTLREKSILLVKMMTYIEK 2405
Query: 2011 RFP---DLNTMFLEIVLYVYMDENLKNSELVTKLEPAFLSGLRCSNPALRAKFFQLLNGS 2067
RFP +LN FL++V YVY DE L SEL KLEPAFLSGLRC+ P +RAKFF++ + S
Sbjct: 2406 RFPEDLELNAQFLDLVNYVYRDETLSGSELTAKLEPAFLSGLRCAQPLIRAKFFEVFDNS 2465
Query: 2068 IRRLLHDRLLYIFSSQNWEPMGPHYWLKQCIELILVSAISSSKIKLAEETGVLPNISSVI 2127
++R +++RLLY+ SQNWE MG H+W+KQCIEL+L S+ I + + +LP+I++VI
Sbjct: 2466 MKRRVYERLLYVTCSQNWEAMGNHFWIKQCIELLLAVCEKSTPIGTSCQGAMLPSITNVI 2525
Query: 2128 SLAEDPVERENYFNVVLNAADLKTEPNLNGENILESLEEYEFDV-----DEFGNCRIQQL 2182
+LA D +R + V +K EP EN E+ E D+ D+ + ++L
Sbjct: 2526 NLA-DSHDRAAFAMVT----HVKQEPR-ERENSESKEEDVEIDIELAPGDQTSTPKTKEL 2579
Query: 2183 SRED-------LLNKQNKFLENAREYNTSDLLVSLAQLCHLDTHLAEKVWLDMFPQMWSI 2235
S +D L N+ +KFL+ RE T LL + QLCH+ T LAEK W+ +FP++W I
Sbjct: 2580 SEKDIGNQLHMLTNRHDKFLDTLREVKTGALLSAFVQLCHISTTLAEKTWVQLFPRLWKI 2639
Query: 2236 LSETQQQNLTDEIIPFIVSGIHVVQKDVHPSSINTIYESLAHCNPPLPIKPAIMTYLGKA 2295
LS+ QQ L EI PF+ SG H VQ+D PS++N E+++ C PP+PI+P ++ YLGK
Sbjct: 2640 LSDRQQHALAGEISPFLCSGSHQVQRDCQPSALNCFVEAMSQCVPPIPIRPCVLKYLGKT 2699
Query: 2296 QGLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAEMYSAL 2355
LW R TL LE A E L +Q + + Y+ E P QQ+I+D LAE+YS L
Sbjct: 2700 HNLWFRSTLMLEHQAFEKGLS---LQIKPKQTTEFYEQE-SITPPQQEILDSLAELYSLL 2755
Query: 2356 REEDMWFGLWQKNAKHKETLYALAYEQQGFYEQALKAYEVTIKKGLEEYANSPAPISHNS 2415
+EEDMW GLWQK K+ ET A+AYEQ GF+EQA ++YE + K +E+ S A +
Sbjct: 2756 QEEDMWAGLWQKRCKYSETATAIAYEQHGFFEQAQESYEKAMDKAKKEHERSNASPAIFP 2815
Query: 2416 ELRLREKQWLR 2426
E +L E W+R
Sbjct: 2816 EYQLWEDHWIR 2826
|
Adapter protein, which is found in various multiprotein chromatin complexes with histone acetyltransferase activity (HAT), which gives a specific tag for epigenetic transcription activation. Component of the NuA4 histone acetyltransferase complex which is responsible for acetylation of nucleosomal histones H4 and H2A. Plays a central role in MYC transcription activation, and also participates in cell transformation by MYC. Required for p53/TP53-, E2F1- and E2F4-mediated transcription activation. Also involved in transcription activation mediated by the adenovirus E1A, a viral oncoprotein that deregulates transcription of key genes. Probably acts by linking transcription factors such as E1A, MYC or E2F1 to HAT complexes such as STAGA thereby allowing transcription activation. Probably not required in the steps following histone acetylation in processes of transcription activation. May be required for the mitotic checkpoint and normal cell cycle progression. Homo sapiens (taxid: 9606) |
| >sp|Q8I8U7|TRA1_DROME Transcription-associated protein 1 OS=Drosophila melanogaster GN=Nipped-A PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q80YV3|TRRAP_MOUSE Transformation/transcription domain-associated protein OS=Mus musculus GN=Trrap PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|P38811|TRA1_YEAST Transcription-associated protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRA1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family protein C1F5.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F5.11c PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q9HFE8|TRA1_SCHPO Transcription-associated protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tra1 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q54T85|TRA1_DICDI Probable transcription-associated protein 1 OS=Dictyostelium discoideum GN=tra1 PE=3 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2426 | ||||||
| 345480161 | 3803 | PREDICTED: transformation/transcription | 0.971 | 0.619 | 0.564 | 0.0 | |
| 242011206 | 3758 | transformation/transcription domain-asso | 0.974 | 0.629 | 0.556 | 0.0 | |
| 383854902 | 3780 | PREDICTED: transformation/transcription | 0.974 | 0.625 | 0.556 | 0.0 | |
| 383854900 | 3785 | PREDICTED: transformation/transcription | 0.974 | 0.624 | 0.556 | 0.0 | |
| 350397835 | 3783 | PREDICTED: transformation/transcription | 0.973 | 0.624 | 0.559 | 0.0 | |
| 340724340 | 3783 | PREDICTED: transformation/transcription | 0.973 | 0.624 | 0.559 | 0.0 | |
| 66523982 | 3782 | PREDICTED: transformation/transcription | 0.973 | 0.624 | 0.554 | 0.0 | |
| 380021027 | 3782 | PREDICTED: LOW QUALITY PROTEIN: transfor | 0.973 | 0.624 | 0.553 | 0.0 | |
| 322792873 | 3750 | hypothetical protein SINV_11613 [Solenop | 0.976 | 0.632 | 0.531 | 0.0 | |
| 270008829 | 3674 | hypothetical protein TcasGA2_TC015434 [T | 0.977 | 0.645 | 0.537 | 0.0 |
| >gi|345480161|ref|XP_001607204.2| PREDICTED: transformation/transcription domain-associated protein-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 2741 bits (7104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1398/2476 (56%), Positives = 1805/2476 (72%), Gaps = 119/2476 (4%)
Query: 1 MSQLFEEDFQLGSGWTTHESLRPLVYSTLADLVHHVRQLLPMSDLIKAVHLFSKNIHDET 60
M +LF+E+ LG GWTT+ESLRPL YSTLADLVHHVRQLLP+SDL +AVHLFSKN+HD++
Sbjct: 347 MERLFDEEVLLGHGWTTYESLRPLAYSTLADLVHHVRQLLPLSDLARAVHLFSKNVHDQS 406
Query: 61 LPTTIHTMSCKLLLNLVDFIRTKNQAEIEQGRIGDNIGQELLERMLETMVLKFKTIAKLQ 120
LPT+I TMSCKLLLNLV+ IR ++ AE N G+ELL RMLE VLKFKTI KLQ
Sbjct: 407 LPTSIQTMSCKLLLNLVECIRQRSDAE------NSNQGRELLMRMLEVFVLKFKTITKLQ 460
Query: 121 LPVLTAKAKTQLALPAPEL---PSTTEDVKPVVNPQTNLIDSPAKTTAGVEKQKPKLGIS 177
+P+L KAK LPAP + P+T EDVKP + A+ E K K G
Sbjct: 461 MPILLNKAKQ---LPAPTIDTKPATAEDVKPNI----------AELQEEKECTKTKFGFP 507
Query: 178 NSPAANYNVNDCRSIVKILICGVKTVTMGLAASKVNASGGEGPTTPPFGQFQPKDTKVYI 237
++ N +V D RS+VK L+CGVKT+T G A N GE + QFQPK+T V+I
Sbjct: 508 STHNQNCSVVDYRSLVKTLVCGVKTITWGCA----NCKSGEVAQS---KQFQPKETLVFI 560
Query: 238 RLVKWALKALDVYTLNPSSSSLLPNNLQRTPLQQASRTKEEKEVLEHFAGVFSLMTPQTF 297
RLVKWAL+ALD+YT+ P + L R Q R+KEEKEVLEHF+GVFS+M PQTF
Sbjct: 561 RLVKWALQALDIYTIGPPALGALAQP-GRPAQPQTVRSKEEKEVLEHFSGVFSMMNPQTF 619
Query: 298 REIFASTIDYMVDRMAHNYTLQVISNSFLVTRDTSPVFATVLVEYLLEHMEEMGNGNVER 357
+EIF++TIDYMV+R+ N LQ++ NSFL TSP+FATVLVEYLLE M++MG+ NV+R
Sbjct: 620 QEIFSTTIDYMVERIFKNAALQIVGNSFLANPTTSPIFATVLVEYLLERMDDMGS-NVDR 678
Query: 358 SNLCLKLFKLVFGSVSFYPAENEHMLRPHLHQIVNRSMELAMTAKEPYNYFLLLRALFRS 417
SNL L+LFKLVFGSVS +PAENEHMLRPHLHQIVNRSMELAM+AKEPYNYFLLLRALFRS
Sbjct: 679 SNLYLRLFKLVFGSVSLFPAENEHMLRPHLHQIVNRSMELAMSAKEPYNYFLLLRALFRS 738
Query: 418 IGGGSHDLLYQEFLPLLRNLLQGLNSLQSGLHKQQMKDLFVELCLTVPVRLSSLLPYLPM 477
IGGGSHDLLYQEFLPLL NLL+GLN LQSGLHKQ MKDLFVELCLTVPVRLSSLLPYLPM
Sbjct: 739 IGGGSHDLLYQEFLPLLPNLLEGLNRLQSGLHKQHMKDLFVELCLTVPVRLSSLLPYLPM 798
Query: 478 LMDPLVSALNGSSTLISQGLRTLELCVDNLQPDFLYDHIQPVRADLMQALWRSLRSPNEQ 537
LMDPLVSALNGS TL+SQGLRTLELCVDNLQPDFLY+HIQPVRADLMQALWR+LR+P +Q
Sbjct: 799 LMDPLVSALNGSHTLVSQGLRTLELCVDNLQPDFLYEHIQPVRADLMQALWRTLRNPTDQ 858
Query: 538 VAHVAYRVLGKFGGGNRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQKTINLSVEKAIDVA 597
VAHVA+RVLGKFGGGNRKMMIEPQKL+YN R +N PA+V +F E K I+ +VEK I+ A
Sbjct: 859 VAHVAFRVLGKFGGGNRKMMIEPQKLEYNDRETNPPAIVAYFQEPSKGIDFAVEKVIETA 918
Query: 598 ITVLKNPAVDMFYRKQGWKVVKGYIISSMNLSDNRSTIQKLFSHPSF--GNTESSQGTMY 655
T LK+ D FYRKQ W+V+ Y+ +S+ L D+R+T+ K F+HPSF G QG Y
Sbjct: 919 FTALKSNTTDPFYRKQCWEVINCYLAASLRLDDDRATLYKFFTHPSFKEGKIPHQQGPHY 978
Query: 656 KYADPTIRNTHQNALTGIFMVYLIKELRKDSLLYTVLVVRHYTLVAITQQTGPFPLYGKS 715
K D RN Q ALTG+F+ IKELR+ L +VRHYT+VAI QQ GPF L KS
Sbjct: 979 KSLDTVARNVQQTALTGLFVAAAIKELRQSVLGTMFSIVRHYTMVAIAQQAGPFCLTNKS 1038
Query: 716 ALLEGTMDPLVLIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEY 775
L+G DPLVLIDA+AVI+GHE+KELCKPG +AL I+ETAT I GS E AC LPLMEY
Sbjct: 1039 NRLQG-QDPLVLIDALAVIMGHEEKELCKPGNLALVLILETATNILGSKERACQLPLMEY 1097
Query: 776 LAERMCNLCYERAWYAKLGGCYAIKFFYNTMAIKWVYSHMFVFVKALLFVMMDLTGEVSS 835
LA++MC+LCYERAWYAKLGGC AIKF + MA KWV +H+FVF++AL+FVMMDLTGEVS+
Sbjct: 1098 LADKMCSLCYERAWYAKLGGCMAIKFLFERMATKWVLNHLFVFLRALIFVMMDLTGEVSN 1157
Query: 836 GAIDEARRNLKQLIVLCATP-IKEPVDAETLTVQSKALSEVTNELTRNITLPNDLLREQS 894
GAID A+ NL++++ +C P ++EP ++E L Q+KAL EVT+EL R +T P+ ++REQ+
Sbjct: 1158 GAIDMAKANLEKMLRVCVNPGVQEPGNSELLEAQNKALYEVTHELVRQVTSPHTIVREQA 1217
Query: 895 MYLLQVFAETQGKSVVQVMEPHKDVLADIIPPKKLLIRNHSANAQIGLMEGNTFCQSLTP 954
M L++ AE Q K+V +VMEPHK+VLAD+IPPKK L+R+ ANAQIGLM+GNTFC +L+P
Sbjct: 1218 MASLRLLAEIQNKTVTEVMEPHKEVLADMIPPKKHLLRHQPANAQIGLMDGNTFCTTLSP 1277
Query: 955 RLFTTDMSIHEHSSFFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRALASWHYVP 1014
RLFT D+ EH FF+E+ + E+ D L +LPCYK + +L+PLRK+A+RALA+ HY+
Sbjct: 1278 RLFTIDLKTVEHKVFFEELLTLNEAEDINLNRLPCYKSVPNLIPLRKSALRALAACHYIA 1337
Query: 1015 NCSQKIFNTLFAALERPNPELQEAAFQAMKTFVNGSPIDLKSVYEVMKPLLLTLGDYRNL 1074
+ Q IF L+AALE+PN ELQEAAF+ M+ F+ G ID++SV+ +M+P+LLTLGD+RNL
Sbjct: 1338 DKRQNIFEVLYAALEKPNTELQEAAFECMQKFIAGFQIDMESVHAIMRPMLLTLGDHRNL 1397
Query: 1075 NLVTARKLSYIVQPFPSSFSEKLCEQLLVNLKNLFENIVAQKENPPKNSETEKIIVVIIG 1134
+L ++LSY+ Q FPS+FS LCEQLL +LK L EN++ + K E E+ I IIG
Sbjct: 1398 SLNCVKRLSYLTQLFPSTFSITLCEQLLQHLKKLLENLIQAHKGVSKTGENEQKIATIIG 1457
Query: 1135 IFKESPAAKAQFIEPLISLILENEHALSIGPYSPYREPLVKYLLRYPTETLQSMLSEIHM 1194
IF + PAA +FI+ L L+++ E +L + SP+R PL+K+LLRYPTETL L++ ++
Sbjct: 1458 IFHQIPAATPKFIDVLCRLVMQTEKSLLVEASSPFRMPLMKFLLRYPTETLNLFLNDNNI 1517
Query: 1195 KDPLWRNFFVYLIKHQEGKCFRDALQTQFVDRLI--LYTFSAINPNCTNLTTAEKLEMQY 1252
KD W + +LIKH+EGK FRD L RLI L S IN +NLT +EK E+Q+
Sbjct: 1518 KDQQWSRYLEFLIKHKEGKPFRDVLHKS-TTRLITMLLAHSQIN---SNLTHSEKSELQH 1573
Query: 1253 IGIRLVSILIKLDTKWLSSQNQLISVMQKIWCDDEYLQRHRNVENISYVHWKEPKLLVKI 1312
IR+VS+LIK D +WLS+Q QL++ +++IWC+D+Y H+ V++I + HWKEPKL+VKI
Sbjct: 1574 QAIRIVSVLIKFDEQWLSTQTQLVTALRQIWCNDDYHALHKKVDSIDFCHWKEPKLIVKI 1633
Query: 1313 LLHYFSHHRHIIDLLFFILRAVTERLLPDFTFLREFLETTVAQTYSIEWKRKAFLRFLEL 1372
LLHYF HH + IDLLF +LRA R +PDF FLR+FLE TVAQ Y++EWKR AF RF+E
Sbjct: 1634 LLHYFCHHPNDIDLLFQLLRATCGRYVPDFQFLRDFLENTVAQEYTVEWKRSAFFRFVEH 1693
Query: 1373 FKLALVSQELKAKILQLVLIPCLTVCFERGEGDKLIGGTGLPEDEDNKNANLVNEFIAKI 1432
F ++ S ELKAKI+QL++IPC V FE+GE KL+G T +P + N+V+ FI KI
Sbjct: 1694 FPTSM-SPELKAKIVQLIIIPCFAVSFEKGEDTKLVGSTPVPYQDSPD--NVVSVFITKI 1750
Query: 1433 ISPITESPPVFVISDNVRILLLQMCCLIVEQSYHYVYNVSQGKILVNKAKPLIMFAWQLS 1492
I P E+P +D VRI LLQ CL+VE + Y+++ + K NK + L+ FAW
Sbjct: 1751 IDP--ENP--LTATDCVRIALLQCSCLMVELASQYIHDAA-NKRQGNKLRRLMTFAWP-C 1804
Query: 1493 LLGKNFVDPATRYHGHLLLAHMIAKFGVSQRVVVQVFLGLLRAHASEVRPIVRQALEILT 1552
LLGKN VDP TRYHGHLLL+H+IAKF + +++V+QVF LL+AHA E R +VRQALEI+T
Sbjct: 1805 LLGKNCVDPVTRYHGHLLLSHVIAKFAIHKKIVLQVFHSLLKAHAVEARNVVRQALEIIT 1864
Query: 1553 PAFPGRVDDGQRMLLVYTKKILVEEGHSNPQLSHVLTLIVKHYKVYYPVRHGLIQQMIAS 1612
PA P R++DG +ML +TKKI+VEEGHS QL H+L L+V+HYKVYYPVRH L+Q M+ S
Sbjct: 1865 PAMPVRMEDGFKMLTHWTKKIIVEEGHSMQQLFHILQLVVRHYKVYYPVRHHLVQHMVNS 1924
Query: 1613 MQRLGFSSSA-MDHKKLSVELADVIIKWELQRVKEEAEGT-SGGKAIQ----------EP 1660
+QRLGFS +A +DH++L+VELA+VIIKWEL R+K+EAE +GG + EP
Sbjct: 1925 IQRLGFSPTATIDHRRLAVELAEVIIKWELHRIKDEAENVETGGTGVMTGNLKRSPSYEP 1984
Query: 1661 PRKKMALES-------------FAPGESSMKYDIPTASKPIEKVHADAVINFLARLSCQV 1707
K+MA ++ +PG + P A+KPIE+ HADA++NFL RL+CQV
Sbjct: 1985 EAKRMATQAGINQVAVAVTAAAASPGLLVTQKMEPGATKPIERAHADAILNFLLRLACQV 2044
Query: 1708 SDLPPNLSSSMQSQVIQTPGEMLARRCVSLIRMALKPEVWSHQNTEFKLTWLDKVLSSID 1767
+D +++ Q PGE L+RRCV+L++MALKP+VW Q+ + KL WLDKV +S++
Sbjct: 2045 ND-----TTTTQG----NPGEQLSRRCVALLKMALKPDVWP-QSCDLKLGWLDKVFASVE 2094
Query: 1768 QPTANLGNISIALELLTLLITILDEGQILHIIKPLQRGLVACISSSITKVIRLVHALLCR 1827
N GNI ALEL+T L+ ++ QIL KPLQRGL ACI+++ KVIRLVH LL R
Sbjct: 2095 TNQPNYGNICTALELVTFLLGVMKREQILASFKPLQRGLGACIANTNAKVIRLVHGLLSR 2154
Query: 1828 LMSTFPTEPISSNVASKREELDHLYVCVSKVIYEGLSNYEKNPTATCSTLYGTVMMLKAA 1887
LM+ FPTEP +S VASK EEL+ LY V K + +GL+ YEKN +A S+LYGT+MMLKAA
Sbjct: 2155 LMTIFPTEPTTSTVASKHEELETLYGTVGKFVIDGLAAYEKNASAQTSSLYGTLMMLKAA 2214
Query: 1888 CMNHPAYVDRFILEFMRVIQRMAREHIATSTADAPQQVGGELLIYCLDLVKTRFCSMSQE 1947
C N+ +Y+DR I FMRV+ RMA++H+ + + QVG ELLI LDLVK R M +
Sbjct: 2215 CTNNQSYIDRIISPFMRVLHRMAKDHLHPTQTEN-NQVGSELLIMSLDLVKNRVAVMGVD 2273
Query: 1948 TRKQFIGTIILGLIDKTPDIKVMKAIIKMTEEWLKVNK--VEQNNVPNLKEKCIILVKLM 2005
RK FIG+I++GLI+KT DIKVMKAI KM EEW+K NK V N P+L+EK I+LVK+M
Sbjct: 2274 MRKSFIGSILVGLIEKTQDIKVMKAITKMLEEWMK-NKSPVAVNQAPSLREKSILLVKMM 2332
Query: 2006 HFVEKRFPD---LNTMFLEIVLYVYMDENLKNSELVTKLEPAFLSGLRCSNPALRAKFFQ 2062
+VEKRFPD LN FLE+V YVY DE LK+SEL +KLEPAFLSGLRC P +RAKFF+
Sbjct: 2333 QYVEKRFPDDLELNGQFLELVNYVYRDETLKSSELTSKLEPAFLSGLRCIQPHIRAKFFE 2392
Query: 2063 LLNGSIRRLLHDRLLYIFSSQNWEPMGPHYWLKQCIELILVSAISSSKIKLAEETGVLPN 2122
+ +GS+RR LH+RLLYI SQ+W+ MGPHYW+KQCIEL++V+A S+++++++ + +LP+
Sbjct: 2393 VFDGSMRRRLHERLLYIICSQSWDAMGPHYWIKQCIELLIVTANSTTQVQMSNQDTLLPS 2452
Query: 2123 ISSVISLAEDPVERENYFNVVLNAADLKTEPNLNGENILESLEEYEFDVDEFGNCRIQ-- 2180
I+S+I+ D E++++ L + +K EP ++++ES + + D+ + I
Sbjct: 2453 ITSLINNV-DSEEQKSF----LMYSMVKEEP----QDMMES-GDVKDDIMDMDLSNIDPV 2502
Query: 2181 ----------QLSREDLLNKQNKFLENAREYNTSDLLVSLAQLCHLDTHLAEKVWLDMFP 2230
Q + L+ Q +FLE +++ T LL + AQLCH+DT+L+E+VWLD FP
Sbjct: 2503 TTPEEVTTGTQTTLAQLIANQAEFLEQSKKIRTEQLLNAAAQLCHMDTNLSERVWLDTFP 2562
Query: 2231 QMWSILSETQQQNLTDEIIPFIVSGIHVVQKDVHPSSINTIYESLAHCNPPLPIKPAIMT 2290
++W+IL E QQ L EI+PF+ SG HV+QKD HPS+I T E+L+HCNPP+ ++PA+M
Sbjct: 2563 RLWNILDEHQQNTLIAEIVPFVCSGTHVIQKDCHPSAIATFVEALSHCNPPVAMRPALMK 2622
Query: 2291 YLGKAQGLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAE 2350
YLG++ LWHR+TLSLE+MA E Q +A +DCYDFEPD++P +++D L++
Sbjct: 2623 YLGRSHNLWHRMTLSLEQMAFEN----GNNQIKAKRESDCYDFEPDNSP-HTEVLDSLSD 2677
Query: 2351 MYSALREEDMWFGLWQKNAKHKETLYALAYEQQGFYEQALKAYEVTIKKGLEEYANSPAP 2410
MYS L EEDMW GLWQK+A +KETL A A EQQGF+EQA AY++ + K ++Y ++PAP
Sbjct: 2678 MYSLLCEEDMWSGLWQKHAHYKETLQATALEQQGFFEQAQNAYDLAMTKFKQDYVSTPAP 2737
Query: 2411 ISHNSELRLREKQWLR 2426
E L E W+R
Sbjct: 2738 FKTQREALLWEHHWIR 2753
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242011206|ref|XP_002426346.1| transformation/transcription domain-associated protein, putative [Pediculus humanus corporis] gi|212510423|gb|EEB13608.1| transformation/transcription domain-associated protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|383854902|ref|XP_003702959.1| PREDICTED: transformation/transcription domain-associated protein isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|383854900|ref|XP_003702958.1| PREDICTED: transformation/transcription domain-associated protein isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|350397835|ref|XP_003485007.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 1 [Bombus impatiens] gi|350397846|ref|XP_003485008.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340724340|ref|XP_003400540.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 1 [Bombus terrestris] gi|340724342|ref|XP_003400541.1| PREDICTED: transformation/transcription domain-associated protein-like isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|66523982|ref|XP_393981.2| PREDICTED: transformation/transcription domain-associated protein isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|380021027|ref|XP_003694376.1| PREDICTED: LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|322792873|gb|EFZ16706.1| hypothetical protein SINV_11613 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|270008829|gb|EFA05277.1| hypothetical protein TcasGA2_TC015434 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2426 | ||||||
| UNIPROTKB|E1BRF2 | 3815 | TRRAP "Uncharacterized protein | 0.713 | 0.453 | 0.469 | 0.0 | |
| FB|FBgn0053554 | 3803 | Nipped-A "Nipped-A" [Drosophil | 0.597 | 0.381 | 0.479 | 0.0 | |
| RGD|1305446 | 3848 | Trrap "transformation/transcri | 0.624 | 0.393 | 0.445 | 0.0 | |
| UNIPROTKB|J9NV05 | 3847 | TRRAP "Uncharacterized protein | 0.626 | 0.395 | 0.440 | 0.0 | |
| UNIPROTKB|E1C796 | 3819 | TRRAP "Uncharacterized protein | 0.626 | 0.397 | 0.442 | 0.0 | |
| UNIPROTKB|E1BKJ5 | 3831 | TRRAP "Uncharacterized protein | 0.626 | 0.397 | 0.437 | 0.0 | |
| UNIPROTKB|F2Z2U4 | 3847 | TRRAP "Transformation/transcri | 0.626 | 0.395 | 0.438 | 0.0 | |
| UNIPROTKB|E2RJS8 | 3861 | TRRAP "Uncharacterized protein | 0.486 | 0.305 | 0.437 | 0.0 | |
| UNIPROTKB|F1RFK3 | 3563 | TRRAP "Uncharacterized protein | 0.493 | 0.335 | 0.433 | 0.0 | |
| UNIPROTKB|Q9Y4A5 | 3859 | TRRAP "Transformation/transcri | 0.486 | 0.305 | 0.435 | 0.0 |
| UNIPROTKB|E1BRF2 TRRAP "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 4008 (1415.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 851/1811 (46%), Positives = 1174/1811 (64%)
Query: 1 MSQLFEEDFQLGSGWTTHESLRPLVYSTLADLVHHVRQLLPMSDLIKAVHLFSKNIHDET 60
M +LF+E +GSG+T E+LRPL YSTLADLVHHVRQ LP++DL AV LF+KNI DE+
Sbjct: 351 MDKLFDESILIGSGYTARETLRPLAYSTLADLVHHVRQHLPLNDLSLAVQLFAKNIDDES 410
Query: 61 LPTTIHTMSCKLLLNLVDFIRTKNQAEIEQGRIGDNIGQELLERMLETMVLKFKTIAKLQ 120
LP++I TMSCKLLLNLVD IR+K+ E E G G+++L RMLE VLKF TIA+ Q
Sbjct: 411 LPSSIQTMSCKLLLNLVDCIRSKS--EQENGN-----GRDILMRMLEVFVLKFHTIARYQ 463
Query: 121 LPVLTAKAKTQLALPAPE--LPS--TTEDVKPVVNPQTNLIDSPAKTTAGV-EKQKPKLG 175
L + K K Q L A E LP T + PV P A V EKQ K
Sbjct: 464 LSGIFKKCKPQSELGAAEAALPGVPTAANAAPVPVPSPAPATPVAPAPVPVFEKQGEK-- 521
Query: 176 ISNSPAANYNVNDCRSIVKILICGVKTVTMGLAASKVNASGGEGPTTPPFGQFQPKDTKV 235
+ V DCRS+VK L+CGVKT+T G+ + K A GG+ P Q QPK+T++
Sbjct: 522 -EKEDKQTFQVTDCRSLVKTLVCGVKTITWGITSCK--APGGKEAQFIPNKQLQPKETQI 578
Query: 236 YIRLVKWALKALDVYTXXXXXXXXXXXXXQRTPLQQASRTKEEKEVLEHFAGVFSLMTPQ 295
YI+LVK+A++ALD+Y R Q R KEEKEVLEHFAGVF++M P
Sbjct: 579 YIKLVKYAMQALDIYQVQIAGNGQTYV---RVANCQTVRMKEEKEVLEHFAGVFTMMNPL 635
Query: 296 TFREIFASTIDYMVDRMAHNYTLQVISNSFLVTRDTSPVFATVLVEYLLEHMEEMGNGNV 355
TF+EIF +T+ YMV+R++ NY LQ+++NSFL TS +FAT+LVEYLL+ + EMG+ NV
Sbjct: 636 TFKEIFQTTVPYMVERISKNYALQIVANSFLANPTTSALFATILVEYLLDRLPEMGS-NV 694
Query: 356 ERSNLCLKLFKLVFGSVSFYPAENEHMLRPHLHQIVNRSMELAMTAKEPYNYFLLLRALF 415
E SNL LKLFKLVFGSVS + AENE ML+PHLH+IVN SMELA TAKEPYNYFLLLRALF
Sbjct: 695 ELSNLYLKLFKLVFGSVSLFAAENEQMLKPHLHKIVNSSMELAQTAKEPYNYFLLLRALF 754
Query: 416 RSIGGGSHDLLYQEFXXXXXXXXXXXXXXXXXXHKQQMKDLFVELCLTVPVRXXXXXXXX 475
RSIGGGSHDLLYQEF HKQ MKDLFVELCLTVPVR
Sbjct: 755 RSIGGGSHDLLYQEFLPLLPNLLQGLNMLQSGLHKQHMKDLFVELCLTVPVRLSSLLPYL 814
Query: 476 XXXXXXXVSALNGSSTLISQGLRTLELCVDNLQPDFLYDHIQPVRADLMQALWRSLRSPN 535
VSALNGS TL+SQGLRTLELCVDNLQPDFLYDHIQPVRA+LMQALWR+LR+P
Sbjct: 815 PMLMDPLVSALNGSQTLVSQGLRTLELCVDNLQPDFLYDHIQPVRAELMQALWRTLRNPA 874
Query: 536 EQVAHVAYRVLGKFGGGNRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQKTINLSVEKAID 595
+ ++HVAYRVLGKFGG NRKM+ E QKL Y + GP++ + F + + +I L +EKAI+
Sbjct: 875 DSISHVAYRVLGKFGGSNRKMLKESQKLQYVVTEIQGPSITIEFSDCKASIQLPMEKAIE 934
Query: 596 VAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLSDNRSTIQKLFSHPSFGNTESSQGTM- 654
A+ LK+ + +YR+Q W+V+K ++++ M+L DN+ + +L +HP+F TE S ++
Sbjct: 935 TALDCLKSANTEPYYRRQAWEVIKCFLVAMMSLDDNKHALYQLLAHPNF--TEKSIPSVI 992
Query: 655 ----YKYADPTIRNTHQNALTGIFMVYLIKELRKDSLLYTVLVVRHYTLVAITQQTGPFP 710
YK D R T + ALTG FM +IK+LR +L + ++RHYT+VA+ QQ GPF
Sbjct: 993 ISHRYKAQDTPARKTFEQALTGAFMSAVIKDLRPSALPFVASLIRHYTMVAVAQQCGPFL 1052
Query: 711 LYGKSALLEGT--MDPLVLIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENAC 768
L + G+ MDPLVLIDAIA+ + +E+KELCK G +AL I + A+ I GS E AC
Sbjct: 1053 LQCYQSEENGSKGMDPLVLIDAIAICMAYEEKELCKIGEVALAVIFDVASIILGSKERAC 1112
Query: 769 NLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTMAIKWVYSHMFVFVKALLFVMMD 828
LPL Y+ ER+C CYE+AWYAKLGG +IKF + + WV + F+KALLFVMMD
Sbjct: 1113 QLPLFSYIVERLCACCYEQAWYAKLGGVVSIKFLMERLPLIWVLQNQQTFLKALLFVMMD 1172
Query: 829 LTGEVSSGAIDEARRNLKQLIVLCATPIK-EPVDAETLTVQSKALSEVTNELTRNITLPN 887
LTGEVS+GA+ A+ L+QL++ CATP+K E E + Q K+ VT++L R +T PN
Sbjct: 1173 LTGEVSNGAVAMAKTTLEQLLIRCATPLKDEEKTEEIIAAQEKSFHHVTHDLVREVTSPN 1232
Query: 888 DLLREQSMYLLQVFAETQGKSVVQVMEPHKDVLADIIPPKKLLIRNHSANAQIGLMEGNT 947
+R+Q+M+ LQV A+ GKSV +MEPHK+VL D++PPKK L+R+ ANAQIGLMEGNT
Sbjct: 1233 STVRKQAMHSLQVLAQVTGKSVTVIMEPHKEVLQDMVPPKKHLLRHQPANAQIGLMEGNT 1292
Query: 948 FCQSLTPRLFTTDMSIHEHSSFFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRAL 1007
FC +L PRLFT D+++ EH F+ E+ N+CE+ D ALMKLPCYK + SLVPLR AA+ AL
Sbjct: 1293 FCTTLQPRLFTMDLNVVEHKVFYTELLNLCEAEDTALMKLPCYKSLPSLVPLRIAALNAL 1352
Query: 1008 ASWHYVPNCSQKIFNTLFAALERPNPELQEAAFQAMKTFVNGSPIDLKSVYEVMKPLLLT 1067
A+ +Y+P +KI LF AL N ELQEA M+ F+ G+ I++ ++ M+PLL+
Sbjct: 1353 AACNYLPQSREKIIAALFKALNSTNNELQEAGEACMRKFLEGATIEVDQIHTHMRPLLMM 1412
Query: 1068 LGDYRNLNLVTARKLSYIVQPFPSSFSEKLCEQLLVNLKNLFENIV-----AQKENPPKN 1122
LGDYR+L L +L+ + + FP+SF++K C+Q++ +L+ E +V Q+ +
Sbjct: 1413 LGDYRSLTLNVVNRLTSVTRLFPNSFNDKFCDQMMQHLRKWMEVVVITHKGGQRSDGNVT 1472
Query: 1123 SETEKIIVVIIGIFKESPAAKAQFIEPLISLILENEHALSIGPYSPYREPLVKYLLRYPT 1182
KI II +F PAA ++PL+ ++++ E A+ I SP+REPL+K+L R+P+
Sbjct: 1473 IMEMKICSAIINLFHLIPAAPQTLVKPLLEVVMKTERAMLIEAGSPFREPLIKFLTRHPS 1532
Query: 1183 ETLQSMLSEIHMKDPLWRNFFVYLIKHQEGKCFRDALQT---QFVDRLI-LYTFSAINPN 1238
+T++ + E + DP W F+ +KH++ K RD L +F+ L+ T + + P
Sbjct: 1533 QTVELFMMEATLNDPQWSRMFMSFLKHKDAKPLRDVLAANPNRFITLLLPAGTQATVRPG 1592
Query: 1239 CTNLTTAEKLEMQYIGIRLVSILIKLDTKWLSSQNQLISVMQKIWCDDEYLQRHRNVENI 1298
+ TT +L++Q+ I+++SI++K D WL++Q+ L+S ++++W + + +RHR EN+
Sbjct: 1593 SPSTTTM-RLDLQFQAIKIISIIVKNDECWLANQHSLVSQLKRVWVSEAFQERHRK-ENM 1650
Query: 1299 SYVHWKEPKLLVKILLHYFSHHRHIIDLLFFILRAVTERLLPDFTFLREFLETTVAQTYS 1358
+ +WKEPKLL LL+Y + I+LLF +LRA T R L + TFL+E++E + + YS
Sbjct: 1651 AATNWKEPKLLAYCLLNYCKRNYGDIELLFQLLRAFTGRFLCNMTFLKEYMEEEIPKNYS 1710
Query: 1359 IEWKRKAFLRFLELFKLALVSQELKAKILQLVLIPCLTVCFERGEGDKLIGGTGLPEDED 1418
I KR F RF++ F ELKAK+LQ +L P FE+GEG++L+G P E
Sbjct: 1711 IPQKRALFFRFVD-FNDPNFGDELKAKVLQHILNPAFLYSFEKGEGEQLLGP---PNPEG 1766
Query: 1419 NKNANLVNEFIAKIISPITESPPVFVISDNVRILLLQMCCLIVEQSYHYVYNVSQGKILV 1478
+ ++ + FI K++ P ++ + D++RI LLQ L+VE + H++++ ++ +
Sbjct: 1767 DNPESITSVFITKVLDPEKQADML----DSLRIYLLQFATLLVEHAPHHIHDNNKNRN-- 1820
Query: 1479 NKAKPLIMFAWQLSLLGKNFVDPATRYHGHLLLAHMIAKFGVSQRVVVQVFLGLLRAHAS 1538
+K + L+ FAW LL K VDPA +Y GHLLLAH+IAKF + +++V+QVF LL+AHA
Sbjct: 1821 SKLRRLMTFAWPC-LLSKACVDPACKYSGHLLLAHIIAKFAIHKKIVLQVFHSLLKAHAM 1879
Query: 1539 EVRPIVRQALEILTPAFPGRVDDGQRMLLVYTKKILVEEGHSNPQLSHVLTLIVKHYKVY 1598
E R IVRQA+ ILTPA P R++DG +ML +T+KI+VEEGH+ PQL H+L LIV+H+KVY
Sbjct: 1880 EARAIVRQAMAILTPAVPARMEDGHQMLTHWTRKIIVEEGHTVPQLVHILHLIVQHFKVY 1939
Query: 1599 YPVRHGLIQQMIASMQRLGFSSSA-MDHKKLSVELADVIIKWELQRVKEEAEGT------ 1651
YPVRH L+Q M+++MQRLGF+ S ++ +KL+V+LA+V+IKWELQR+K++ +
Sbjct: 1940 YPVRHHLVQHMVSAMQRLGFTPSVTIEQRKLAVDLAEVVIKWELQRIKDQQPDSDVDPSA 1999
Query: 1652 SGGKAIQEPPRKKMALESFAPGESSMKYDIPTASKPIEKVH--------ADAVINFLARL 1703
SG A K L S G+ ++ TA+ I V ADA+++ +
Sbjct: 2000 SGEGASSTSSAVKRGL-SVDSGQEVKRFR--TATGAISAVFGRSQSLPGADALLS--KPI 2054
Query: 1704 SCQVSDLPPNLSSSMQSQV---IQTPGEMLARRCVSLIRMALKPEVWSHQ--NTEFKLTW 1758
Q +D N + QV T G + + LK + +E KL W
Sbjct: 2055 DKQHTDTVVNFLIRIACQVNDNSNTAGSPGELLSRRCVNL-LKTALRPDMWPKSELKLQW 2113
Query: 1759 LDKVLSSIDQP 1769
DK+L +++QP
Sbjct: 2114 FDKLLMTVEQP 2124
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| FB|FBgn0053554 Nipped-A "Nipped-A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| RGD|1305446 Trrap "transformation/transcription domain-associated protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9NV05 TRRAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C796 TRRAP "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BKJ5 TRRAP "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F2Z2U4 TRRAP "Transformation/transcription domain-associated protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RJS8 TRRAP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1RFK3 TRRAP "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9Y4A5 TRRAP "Transformation/transcription domain-associated protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9Y4A5 | TRRAP_HUMAN | No assigned EC number | 0.4745 | 0.9773 | 0.6144 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
No hit with e-value below 0.005
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2426 | |||
| KOG0889|consensus | 3550 | 100.0 | ||
| COG5032 | 2105 | TEL1 Phosphatidylinositol kinase and protein kinas | 100.0 | |
| KOG0889|consensus | 3550 | 100.0 | ||
| KOG1824|consensus | 1233 | 97.7 | ||
| KOG2171|consensus | 1075 | 96.3 | ||
| COG5181 | 975 | HSH155 U2 snRNP spliceosome subunit [RNA processin | 92.33 | |
| KOG1242|consensus | 569 | 92.04 | ||
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 91.54 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 91.34 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 90.75 | |
| PF08163 | 394 | NUC194: NUC194 domain; InterPro: IPR012582 Protein | 89.85 | |
| PTZ00429 | 746 | beta-adaptin; Provisional | 89.65 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 87.91 | |
| KOG1242|consensus | 569 | 87.12 | ||
| PF12755 | 97 | Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | 85.89 | |
| KOG0890|consensus | 2382 | 84.99 | ||
| KOG0915|consensus | 1702 | 82.93 | ||
| PF05918 | 556 | API5: Apoptosis inhibitory protein 5 (API5); Inter | 81.87 | |
| KOG2023|consensus | 885 | 81.47 | ||
| KOG1248|consensus | 1176 | 80.09 |
| >KOG0889|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=4083.67 Aligned_cols=2208 Identities=37% Similarity=0.600 Sum_probs=0.0
Q ss_pred CCCcCcccccccccccccccchhhHHHHHHHHHHhhcCCCChHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHH
Q psy5930 1 MSQLFEEDFQLGSGWTTHESLRPLVYSTLADLVHHVRQLLPMSDLIKAVHLFSKNIHDETLPTTIHTMSCKLLLNLVDFI 80 (2426)
Q Consensus 1 id~Llde~vLiG~g~t~~e~LRplays~lADliHhvR~~L~~~qi~~~v~~~~~~lhD~~l~~s~q~ms~kLllnLve~i 80 (2426)
||+|+||+||||+|+|++||||||||||||||+||||++|+++||.|+|++||+||||++++.+||||||||+|||||||
T Consensus 290 id~L~de~iLiG~G~t~~e~lRplays~LAdllHhvR~~L~~~~i~~~i~l~s~~l~D~~l~~~iq~m~akLllNlve~i 369 (3550)
T KOG0889|consen 290 IDKLLDERILIGTGFTAQESLRPLAYSMLADLLHHVRESLSLTQIIKVISLFSRNLHDSSLSSGIQTMSAKLLLNLVERI 369 (3550)
T ss_pred hHHHhccceeecCCcchhhhccHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhcCcchHHHHHHHHHHHHHHHHHHH
Q ss_pred HhcChhhhhhccCCCchhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhhcCCCCCCCCCCCCCCCCCCCCCccCCCC
Q psy5930 81 RTKNQAEIEQGRIGDNIGQELLERMLETMVLKFKTIAKLQLPVLTAKAKTQLALPAPELPSTTEDVKPVVNPQTNLIDSP 160 (2426)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~r~lL~~il~~~v~Kf~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (2426)
..+..++..++ |++|++|||+||+||+++++++.|+++.+++++.+..+..++.. ..+.|
T Consensus 370 ~~~~~~s~~~~-------~~lL~~il~~~v~kf~t~~~~~~~~~~~~~~~e~~~~~~~~~~~-------------~~~~P 429 (3550)
T KOG0889|consen 370 EELGCQSVDRA-------RDLLLRILESFVSKFKTFARYRDSAQFQKCKYEIKIGELKNSLP-------------KIERP 429 (3550)
T ss_pred HHhcCCchhHH-------HHHHHHHHHHHHHHHHHHHHhhhHHHHHhhhhhhhHhhhccccc-------------cCCCc
Q ss_pred ccccCCcccCCCccCCCCCCCCCCCccchHHHHHHHHhhhHHHhhccccccCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q psy5930 161 AKTTAGVEKQKPKLGISNSPAANYNVNDCRSIVKILICGVKTVTMGLAASKVNASGGEGPTTPPFGQFQPKDTKVYIRLV 240 (2426)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~d~r~l~k~l~~g~kti~~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~lf 240 (2426)
...+....+ |+|+|+|+||+++|+|||+|||++|+.|+++ +...++ ....+..+..+..++
T Consensus 430 ~~~~~~~~k----------------v~d~~~L~k~l~~G~Kti~~~i~~~~~p~~~--~~v~~~-~~~~~~~~~~~~~~~ 490 (3550)
T KOG0889|consen 430 AEVPSFGSK----------------VNDCRFLFKTLVSGLKTIIWGIKVAKSPPPS--GFVFNR-LWKYVMHTCSYISLV 490 (3550)
T ss_pred cccCccccc----------------chhHHHHHHHHHhhhHHhhHHhhhccCCCcc--ccccch-hhhhhhHHHHHHHHH
Q ss_pred HHHHhhccccccCCCCCCCCCCcccCCccccccCChHHHHHHHHHHHHHHccChhhHHHHHHhhHHHHHHHHhhcccHHH
Q psy5930 241 KWALKALDVYTLNPSSSSLLPNNLQRTPLQQASRTKEEKEVLEHFAGVFSLMTPQTFREIFASTIDYMVDRMAHNYTLQV 320 (2426)
Q Consensus 241 ~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eeke~le~fa~vF~~ld~~~F~Ei~~~~i~~l~e~~~~n~~L~~ 320 (2426)
++....+.+|..+...+. .++....++++|||||++|+||++|++|||++|.|||++++|++||||++|.+|+|
T Consensus 491 ~~~me~l~~~~~~~~~~~------~~~~~~~s~r~keEke~lE~fa~vF~~i~~s~f~eIfe~~~p~iferi~~n~~l~~ 564 (3550)
T KOG0889|consen 491 RDAMEVLEIYPVNKEDNY------DNPSNSSSPRTKEEKEALEEFATVFEMIDPSVFYEIFETNSPFIFERILKNNALFH 564 (3550)
T ss_pred HHHHhHhhhhheeecccc------ccccccccccchhHHHHHHHHHHHHHHhCcHhHHHHHHHhhHHHHHHHhccCcHHH
Q ss_pred HhHHhhcCCCChhhHHHHHHHHHHHHhhhcCCCCccchhHHHHHHHHHhhhcccCCCCCcccccchHHHHHHHHHHHHHh
Q psy5930 321 ISNSFLVTRDTSPVFATVLVEYLLEHMEEMGNGNVERSNLCLKLFKLVFGSVSFYPAENEHMLRPHLHQIVNRSMELAMT 400 (2426)
Q Consensus 321 i~q~fL~~~~~s~~F~~ill~fL~~~l~~lg~~~~~~~~~~lrLfkl~F~sv~~~~~~nE~vl~phl~~ii~~~~~~a~~ 400 (2426)
|+|+||+||.||+.|++||++||++||+++|+++..+++++|||||++||+|++||.+||+||+||+++||.+||++|++
T Consensus 565 i~n~~l~n~~ts~~fa~ill~fll~rl~e~gs~~~~~s~l~LrLFkl~F~sv~~f~~~nervl~phv~~Ii~~smela~~ 644 (3550)
T KOG0889|consen 565 IANTLLSNESTSVNFANILLSFLLSRLKELGSNDLLDSKLLLRLFKLIFGSVSKFPSENERVLRPHVHDIISTSMELATT 644 (3550)
T ss_pred HHHHHHhCcccchhHHHHHHHHHHHHHHHHccCccccchhhHhhhhhhhhhhhcccccchhhcccchhHHHHHHHHHHhc
Q ss_pred hcCchhHHHHHHHHHHhhcCCchhhHhhhHHHHHHHHHHHHHHhhhcCccchhhhHHhhhhhccccccccccCCcchhhH
Q psy5930 401 AKEPYNYFLLLRALFRSIGGGSHDLLYQEFLPLLRNLLQGLNSLQSGLHKQQMKDLFVELCLTVPVRLSSLLPYLPMLMD 480 (2426)
Q Consensus 401 a~ep~~Y~~LLR~lFRSiggg~fe~LYkeilPLLp~lLe~Ln~Ll~~~~~~~~RdL~VELCLTVPvRLS~LLPyL~~LM~ 480 (2426)
|+||+|||+|||+||||||||+||.||+||+|+||++||.||+|+.++|+++|||||||||||||||||+||||||+||+
T Consensus 645 a~eplnYf~LLraLFRsigGg~~d~ly~e~lplL~~lLe~ln~l~~~~~s~~mkdLfvELclTvPvRLS~Llpylp~LM~ 724 (3550)
T KOG0889|consen 645 APEPLNYFQLLRALFRSIGGGAFDSLYREVLPLLPNLLEILNHLLSSFHSQGMKDLFVELCLTLPVRLSSLLPYLPLLMK 724 (3550)
T ss_pred CCcchhHHHHHHHHHHHhhccchHhHHHHHHHHHHHHHHHHHHHhhccCccchHHHHHHHHHhhhHHHHHhhhhhhhhhh
Q ss_pred HHHHHhcCCchhHHhhhhhhhhhhccCCcchhhhccchHHHHHHHHHHhhcCCC-CchhhHHHHHHhhccCCCccccccc
Q psy5930 481 PLVSALNGSSTLISQGLRTLELCVDNLQPDFLYDHIQPVRADLMQALWRSLRSP-NEQVAHVAYRVLGKFGGGNRKMMIE 559 (2426)
Q Consensus 481 PLV~AL~~~~eLvsqGLRTLElcVDNLtpdfLdp~~~pV~~elm~ALw~~Lkp~-~~~~~~~a~RILGKLGGrNR~~L~~ 559 (2426)
|||.||+|+|+||+||||||||||||||||||||||+||++++|+|||+||||. +++++|.|+|||||||||||+|+++
T Consensus 725 PLv~aLkgs~~lvsQgLRtlelcvDnltPefL~~~mepv~~~lmqaLw~~l~~~~~~s~s~~a~rILGKlgG~NRq~l~~ 804 (3550)
T KOG0889|consen 725 PLVFALKGSPELVSQGLRTLELCVDNLTPEFLDPIMEPVRDDLMQALWSHLRPVPNYSYSHRALRILGKLGGRNRQFLKR 804 (3550)
T ss_pred HHHHHhcCCHHHHHHHHhHHHHHHhcCChHhhhHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHhhcCcchhhccc
Q ss_pred CCCCccccccCCCCeEEEEecCCCcccccchhHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhcccCC-CChhHHHhh
Q psy5930 560 PQKLDYNIRRSNGPAVVVHFPEHQKTINLSVEKAIDVAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLS-DNRSTIQKL 638 (2426)
Q Consensus 560 p~~L~~~~~~~~~~~~~~~f~~~~~~~~lpl~~~i~~A~~~l~~~~~d~~yr~~A~~~l~~~l~~~l~~~-~~~~~~~~~ 638 (2426)
|++|++.++.+.++++.+.|.|..+++.+|+++.|..|.+++.++..|.|||+|||+++++.+..+++.+ +.......+
T Consensus 805 ~q~l~~~~~~~~~~~l~~s~~~~~~~~~lp~~~~i~sA~~~l~s~~~d~~~~~qa~~~l~~~~~~~~~~~~~~~~~~~~l 884 (3550)
T KOG0889|consen 805 PQDLEEIDEDDIDIRLVFSFKGLAHPLLLPLSKLIRSAFDALVSPNSDPFYRKQAFKYLRCDLLLMVNLSADFKSSIRQL 884 (3550)
T ss_pred ccccccccCccccceEEEeccccCccccCchHHHHHHHHHHHhCccCCcchHHHHHHHHHHHHHHHHhhhccchhhHHHH
Q ss_pred hcCCC--------CCCCCCCCCcccccCChhHHHHHHHHHHHHHHHhcchhHHHhHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy5930 639 FSHPS--------FGNTESSQGTMYKYADPTIRNTHQNALTGIFMVYLIKELRKDSLLYTVLVVRHYTLVAITQQTGPFP 710 (2426)
Q Consensus 639 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~f~a~~~~~l~~~a~~f~~~v~rhf~l~~i~~~~~~~~ 710 (2426)
..... ......+..+.+++++..++.+|.+++.++|+|.+++|++++|.+|+..++|||+++.+..+.++..
T Consensus 885 ~~~~~~~i~~~~e~~~~n~~~~~~~~~~~~a~~~~~~~~l~~~~~a~~~~elr~~a~~~~~~il~~f~~~~~~~~~~~~~ 964 (3550)
T KOG0889|consen 885 LTLVVWSIDLRLECCEINLDLTERYKSQDYSDRSIFVNALISLFYATSCKELRDEAQDFLEAILRHFALHGVVLYTGSNQ 964 (3550)
T ss_pred HHhhcchHHHhhHhhhccccccccccccchhHHHHHHHHHHHHHHHHhhHHHHhhhHHHHHHHHHHHHHHHHHHhhcchh
Q ss_pred CCcccc----cccCCCChHHHHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccC
Q psy5930 711 LYGKSA----LLEGTMDPLVLIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYE 786 (2426)
Q Consensus 711 ~~~~~~----~~~~~ld~~vl~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~ 786 (2426)
...... ....++||.+++|||++||++++++++++|..++..|++++..++|+.+.++++|+|.+|+++|||+||+
T Consensus 965 ~~~~~~~~~~~~~~~lD~~i~ldal~~~l~~~~~~~~~~g~~~l~~i~~~~~~~l~~~~~~~~lpi~~~l~~k~~~lCy~ 1044 (3550)
T KOG0889|consen 965 LKHSNFGSNLQYKKMLDPSTFLDALVESLSHENSEMRPAGVRALKVIFSTSTLILGSPERAFKLPMFEYLLEKLCHLCYD 1044 (3550)
T ss_pred ccccccccccccccccCHHHHHHHHHHHHhccchhhhhhHHHHHHHHHHHHHHhhcCcchhhccchHHHHHHHHHHHhcc
Q ss_pred chhhhhHhHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhh
Q psy5930 787 RAWYAKLGGCYAIKFFYNTMAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLT 866 (2426)
Q Consensus 787 ~~w~~K~gG~~gi~~l~~~~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~ 866 (2426)
+.||+|.|||.||++|+++++..|+.++|.++++|++||+||++.|+|++..+.|.+.+..+++.|++....+ +
T Consensus 1045 ~~wy~k~gG~~gI~~l~~~~~~~~l~d~~~d~~~~l~fvl~d~~~e~~~~~~~~~~~~l~~ll~~~~~~~~~~------~ 1118 (3550)
T KOG0889|consen 1045 STWYAKDGGVNGIKCLIESMPSLWLLDFQVDILKALFFVLKDTESEVSSLPLDEAKDILMDILRVIFIDELAE------E 1118 (3550)
T ss_pred HhHHHHcCCCceeeeehhhchHHHHHHHHHHHhhhHHHhhcCCccccccchHHHHHHHHHHHHHHHHHHhhhh------H
Q ss_pred hhhhhHHHHHHHHhhhcCCCChHHHHHHHHHHHHHHHHhCCchhhccccchhhhhccCCCCccccccCchhhhHhhhhhh
Q psy5930 867 VQSKALSEVTNELTRNITLPNDLLREQSMYLLQVFAETQGKSVVQVMEPHKDVLADIIPPKKLLIRNHSANAQIGLMEGN 946 (2426)
Q Consensus 867 ~~~~~~~~~~~~lv~eL~s~n~~VR~~aq~~L~~lae~t~~~v~ell~p~k~~Ll~~I~~Kpl~lRalpf~~QIG~idai 946 (2426)
.+.+.++++++.+|.||+|||+.||+++|.+|..+++.+|.||++||+|+|++++.|+|+||+ |++||++|||+|||+
T Consensus 1119 ~~~~~~~~~~~~lv~eL~npN~~VR~~~~~~L~~i~~~s~~~v~~L~~p~K~~ll~p~f~k~l--r~~p~~~qig~vd~~ 1196 (3550)
T KOG0889|consen 1119 ERAKSAMNVFSPLVLELFNPNSDVREFSQKLLRLISELSGKSVVKLLEPFKDVLLSPIFKKPL--RALPFTIQIGHLDAI 1196 (3550)
T ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhcccccccc--ccCCHHHHhhhHHHH
Q ss_pred hhhcccCCCccccCcchhhHHHHHHHHHHhhccCchhh---hcCCCCCCccccchHHHHHHHHHHhhhcCCch-------
Q psy5930 947 TFCQSLTPRLFTTDMSIHEHSSFFQEITNICESSDQAL---MKLPCYKPISSLVPLRKAAMRALASWHYVPNC------- 1016 (2426)
Q Consensus 947 tfcl~L~p~~l~~~~~~~el~rll~E~l~LadadD~~l---~k~~~~k~~~~lv~LRv~ci~lL~~~~~~~~~------- 1016 (2426)
|||++++|++|+|+ +|+.++.++..+|||+||+.+ .|.++||+...+++||++|+++|++|++..+|
T Consensus 1197 ~fC~~l~p~~f~~~---~~l~~l~~~~~~La~~~~~~~~~i~k~~~~k~~~~l~~Lr~~ci~ll~~~~~~~d~~~~~~~~ 1273 (3550)
T KOG0889|consen 1197 TFCLSLGPCLFDFT---EELYRLKRFLIALADAEEDELATIQKTSDYKNSSSLVRLRVACIKLLAACMKLSDFRTPQHAE 1273 (3550)
T ss_pred HHHHHcCCcccCch---HHHHHHHHHHHHhhhhhhhhhhhhhcccccccccccccchhHHHHHHHHHHhcccccchhhhh
Q ss_pred -hhHHHHHHHHhhcCCCHHHHHHHHHHHHHHHcc-CCCChhhHHHhhHHHHhhhcCCCCCCHhHHHHHHHhhhhCCCccc
Q psy5930 1017 -SQKIFNTLFAALERPNPELQEAAFQAMKTFVNG-SPIDLKSVYEVMKPLLLTLGDYRNLNLVTARKLSYIVQPFPSSFS 1094 (2426)
Q Consensus 1017 -~~rIi~vfFKsL~s~s~ei~~aA~~gLk~vL~~-~~~~~e~L~q~LRPiL~nLsD~k~Ltv~gLegLarLLeLL~nyFk 1094 (2426)
|.||++||||+||++++||+++|.+||+.|+++ ++.++|.+|.+|||+||||+||++|+|||++||+|+++|++||||
T Consensus 1274 ~r~kii~v~fk~l~~~~~Ei~~~~~~~l~~v~~~~~~~~ke~lq~~lrplL~~l~d~~~lsv~~l~~ls~l~~ll~~~f~ 1353 (3550)
T KOG0889|consen 1274 LREKIIAVFFKSLYKRSSELIEVALEGLRKVLAQDVKLPKELLQSHLRPLLMNLSDHNNLSVPGLEGLSRLLRLLINYFK 1353 (3550)
T ss_pred hhhHHHHHHHHHHcCChHHHHHHHHHHHHhhhhccccccHHHHHhhHHHHHHhhhHhhhhhHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-cCCCCCCcchhHHHHHHHhhccCchhHHhhHHHHHHHHHHHHHhcCCCCCCCCcchH
Q psy5930 1095 EKLCEQLLVNLKNLFENIVAQK-ENPPKNSETEKIIVVIIGIFKESPAAKAQFIEPLISLILENEHALSIGPYSPYREPL 1173 (2426)
Q Consensus 1095 veiG~KLLdHLk~~~e~~~~~~-~~~~~~~~~~kii~aIinIFHLLP~aa~~Fle~Lv~~Vl~lE~~L~~~~~SPfR~PL 1173 (2426)
||||+||+||+++|.++.+.+. ...++.+.++||+++|+|+||++|+++++|+++|+.+|+.+|+.|+.+.+||||+||
T Consensus 1354 ~e~~rkll~hl~~~~~~~~~~y~~~~l~~~~~~~i~~~~i~~f~~lp~~~~~~~~~Ll~~v~~~e~~L~~~~~sp~r~pl 1433 (3550)
T KOG0889|consen 1354 VEIGRKLLQHLKKWLEDEVLDYLSGALKAGPEMKIIVVIINLFHLLPPAADKFLDELLLCVVLLEEVLRKEENSPFREPL 1433 (3550)
T ss_pred HHHHHHHHHhhHHhhhHHHHHHHhhhhccCccchhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhHH
Q ss_pred HHHHhhCcHHHHHHhhcccCCCchhHHHHHHHHhhCCCCHHHHHHHHHhhHHHHHHHHhhcCCCCCCCcchHHHhHHHHH
Q psy5930 1174 VKYLLRYPTETLQSMLSEIHMKDPLWRNFFVYLIKHQEGKCFRDALQTQFVDRLILYTFSAINPNCTNLTTAEKLEMQYI 1253 (2426)
Q Consensus 1174 ~kfLnRyp~e~~~~Fl~~~~l~~~~~~~~f~~il~~~~a~~Lr~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 (2426)
.|||||||.+||+||+ .++.+++|.++|.++++.+.+.+||+++.++ +.++.............+ ..+.+.+++
T Consensus 1434 ~kfl~r~~~~tv~~f~--~~~~~~~~~~~f~~~~~~~~~~~l~e~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 1507 (3550)
T KOG0889|consen 1434 LKFLNRFANPTVDYFL--AQLDEPDLYRMFVYALRIDDLLPLREVLAKE-WLEFYTLLDPEISSYTVP---NMASDIQFQ 1507 (3550)
T ss_pred HHHHHHccCchHHHHH--HHcchHHHHHHHHHHHcccchhHHHHHHhhh-HHHHHHhccCccCccccc---hhhcchhhh
Q ss_pred HHHHHHHHHhcCchhhhcChhHHHHHHHHhhchHHHHhhcccccccccccchHHHHHHHHHHHHhhCCCchhhHHHHHHH
Q psy5930 1254 GIRLVSILIKLDTKWLSSQNQLISVMQKIWCDDEYLQRHRNVENISYVHWKEPKLLVKILLHYFSHHRHIIDLLFFILRA 1333 (2426)
Q Consensus 1254 ~l~lv~~l~k~~~~WL~~~~~~v~~L~~~w~~~~~~~r~~~~~~~~~~~~~~~~~l~~i~l~yl~~~~~~~dlLF~ll~~ 1333 (2426)
++.++.++.|+.++|+.++..++.+++.+|....+..|+.....+- ...+++||++|++.+.+|++++|+++++
T Consensus 1508 ~v~~i~~~vk~~~e~~~s~~~iv~~l~~v~~~~~~~~~~~~~~~l~------~~~~~~~lL~~~~~~~~~~~l~~~il~~ 1581 (3550)
T KOG0889|consen 1508 MVPLISTMVKNDDEWLLSSQFIVLALRRIWKLESILERLFLEDRLC------LNSIVKCLLEYLSLNKYDLELLLQILSF 1581 (3550)
T ss_pred hhHHHHHHHhccHHHhhccchHHHHHHHHhhhhHHHHHHHHHHHHH------HHHHHHHHHHHHhhccccHHHHHHHHHH
Q ss_pred HhhccCCCchHHHHHHHhhhcCCCCHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhhHhhHhhhcCCCcccccCCCC
Q psy5930 1334 VTERLLPDFTFLREFLETTVAQTYSIEWKRKAFLRFLELFKLALVSQELKAKILQLVLIPCLTVCFERGEGDKLIGGTGL 1413 (2426)
Q Consensus 1334 ~~~~~~~d~~fl~~F~~~~V~~~~s~e~kr~il~~fl~~f~~~~~~~~~k~~~L~~iv~P~L~~~f~~~~~~~~i~~~~~ 1413 (2426)
|..++.+|.+|+++|+..+|+++++..|||+.|.+|++.|.++....++|++.++++|+|++.++|++|+.++++|
T Consensus 1582 ~~~~~~~d~~~l~~~l~~~vi~~~~~~~kr~~f~~~l~~f~~~~~~~~~~~~~l~~li~p~l~~~~~kge~~~i~~---- 1657 (3550)
T KOG0889|consen 1582 FEGNDNIDLTFLKEFLEHEVIKSYSYNMKRNLFLVFLNLFGDKDLGADHKAQVLQGLINPCLNYSFEKGETNEILG---- 1657 (3550)
T ss_pred HhccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhcCCcccchhHHHHHHHHhhhHHHhhcccccccccccC----
Q ss_pred CCcccccchhHHHHHHHHhcCCCCCCCCccCCChhHHHHHHHHHHHHHhhcccccccccccchhhhcccchhcccCCccc
Q psy5930 1414 PEDEDNKNANLVNEFIAKIISPITESPPVFVISDNVRILLLQMCCLIVEQSYHYVYNVSQGKILVNKAKPLIMFAWQLSL 1493 (2426)
Q Consensus 1414 ~~~~~~~~~~~v~~~~~ki~~~~~~~~~~~~~~D~lrieLLQLstlLvk~~~~~i~~~~~~~~l~~~rK~lIkFaW~~i~ 1493 (2426)
++..++++..++++.|+|. ..++|++||++||++|++||++|+|||+ +++++|||||||++
T Consensus 1658 ----~d~~~~~~~~~~~~~~~~~------~~~dd~~~i~~lqL~t~~ik~ase~i~d---------~~~~li~f~w~cl~ 1718 (3550)
T KOG0889|consen 1658 ----PDIVKKIDEVFVNKPLDPS------YAYDDGLRIELLQLATLLIKYASEHIHD---------QRKSLIKFAWNCLK 1718 (3550)
T ss_pred ----CccchhhhhhhccCCCchh------hhccchHHHHHHHHHHHHHhccHHHHHH---------hhHHHHHHHHhhhc
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHhhccCcchhhHhhHHhhhhcCcchHHHHHHHHHhhcCCCCCCCCCchhhHHHHHHHH
Q psy5930 1494 LGKNFVDPATRYHGHLLLAHMIAKFGVSQRVVVQVFLGLLRAHASEVRPIVRQALEILTPAFPGRVDDGQRMLLVYTKKI 1573 (2426)
Q Consensus 1494 l~~~~~D~~~K~~Ayvlia~fI~~f~~P~KIVlQVfvaLLra~q~E~R~LVrqALDIL~P~Lp~R~~~~~~~w~~~tkki 1573 (2426)
. +||+.||+||+++||||++|++|+|||+|||++|||++|+|+|++||||||+|+|++|.||++|+.+|..|+|||
T Consensus 1719 ~----eD~~~k~~~~~~i~~fI~~~~~~~kiV~qvf~~LlkT~~~E~R~~vk~aLdil~p~l~~rm~~g~~~~~~w~kki 1794 (3550)
T KOG0889|consen 1719 S----EDPMIKQSAYLVIAHFIERFQIPPKIVLQVFVALLKTYQPEARAIVKQALDILTPALPARMELGDSKIPIWVKKI 1794 (3550)
T ss_pred c----cchHHHHHHHHHHHHHHHHhccChhHhHHHHHHHhhcccHHHHHHHHHHHHHhchhhhhhccCcccchHHHHHHH
Q ss_pred HhccCCChhhHHHHHHHHhcCCccchhhhhhhHHHHHHHHhhhCCCCCc-chhhHHHHHHHHHHHHhhhhhhhhhhccCC
Q psy5930 1574 LVEEGHSNPQLSHVLTLIVKHYKVYYPVRHGLIQQMIASMQRLGFSSSA-MDHKKLSVELADVIIKWELQRVKEEAEGTS 1652 (2426)
Q Consensus 1574 L~EEgh~~~Ql~hI~qlIVRH~dlFY~~R~~fvp~mInsl~kLg~~~n~-~E~r~LAiDL~elIi~WE~~r~~~~~~~~~ 1652 (2426)
++||||+++|++|||||||||||+||++|++|+++|||+|+|+|+++|+ .|+|+||||+|++|++||.+|.+.+..++.
T Consensus 1795 ivee~~~i~~~~~i~qliv~h~~~~~~~r~~fv~~lv~~~~rl~~~pn~~~e~r~laiel~~~ii~We~~rl~~~~~e~~ 1874 (3550)
T KOG0889|consen 1795 IVEEGHSISQLLHVYQLIVRHSDLFYSSRVRFVTPLVNSLPRLGSMPNSNSENRKLALELAGVIIKWELKRLKDTDSETT 1874 (3550)
T ss_pred HHHhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q ss_pred CCCCCCCCcccccccccCCCCCCCCccCCCCCCCCcchhhHHHHHHHHHHH-HhccCCCCCCCCCcccccccCCchhHHH
Q psy5930 1653 GGKAIQEPPRKKMALESFAPGESSMKYDIPTASKPIEKVHADAVINFLARL-SCQVSDLPPNLSSSMQSQVIQTPGEMLA 1731 (2426)
Q Consensus 1653 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~vvnfLiR~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1731 (2426)
..+..+. .+...++++. .+..+.+..+ ++... -+
T Consensus 1875 ~~~~~e~----------------------------------~~~~s~~~~r~~~~~~~~~~~----------~~~~~-~~ 1909 (3550)
T KOG0889|consen 1875 LFSDSES----------------------------------LMSLSASIKRGFSAIPKRYTP----------GPTNH-EG 1909 (3550)
T ss_pred hcccchh----------------------------------hhhhhhcchhHHHhccCCCCC----------Ccchh-hh
Q ss_pred HHHHHHHHHhcCCCCCCCCccccchhhHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCChhHHHHhhHHHHHHHHHHHh
Q psy5930 1732 RRCVSLIRMALKPEVWSHQNTEFKLTWLDKVLSSIDQPTANLGNISIALELLTLLITILDEGQILHIIKPLQRGLVACIS 1811 (2426)
Q Consensus 1732 ~r~l~LLk~~L~p~~W~~~~v~vkl~~feK~L~~~d~~~~n~~~~~naLevL~il~~~~~~~~il~nl~~lq~lL~kcl~ 1811 (2426)
+|+++++..++|+.|+ ++++||+||||+++..|.+..|.++++|+|+||++++++.+++||.+|+.++|++|++|++
T Consensus 1910 -~~~~~l~~~~~~~~w~--~~~~kL~~~eK~lt~~d~~~~~~~~~~~~ld~l~~v~~~~~~~~i~~n~~~vq~~le~cl~ 1986 (3550)
T KOG0889|consen 1910 -RCVNLDLVSLRPETWP--SVNVKLNYFEKVLTDMDLPENNLGNYANGLDVLSVVLENVPKEWIRENLNQIQALLEKCLK 1986 (3550)
T ss_pred -hHHhHHHHhccccchh--hcchHHHHHHHHhcCCCCcccHHHHHHhhHHHHHHHHhcCCcHHHHHhHHHHHHHHHHHHh
Q ss_pred cCchhHHHHHHHHHHHHHhcCCCCCCCCCccCchhhHHHHHHHHHHHHHhhhccccCCCCCCcchHHHHHHHHHHHhhhC
Q psy5930 1812 SSITKVIRLVHALLCRLMSTFPTEPISSNVASKREELDHLYVCVSKVIYEGLSNYEKNPTATCSTLYGTVMMLKAACMNH 1891 (2426)
Q Consensus 1812 ~~n~~i~~~l~~ll~rll~~~p~~~~~~~~~~~~~e~~~f~~~l~~~i~e~L~~~~~~~~~~~~~~~~~l~lL~~~~~~~ 1891 (2426)
|+|.+++++++++++++|+++| .+++|.+..++.+.+.|.+++++|++++.++.++++|+++++|++|.++
T Consensus 1987 ~~~~~v~~~~~~~l~~~~~~~~---------~~~~e~e~~~~~v~~~i~~~l~s~~~~~~~~~~~~~~~~~~l~~~~~~~ 2057 (3550)
T KOG0889|consen 1987 SGNLKVTEALNQLLSRLLSIFP---------NTHESLELLYQVVSKLIDELLTSVTTVPLQLASNVFGTLTLLKTLCSNN 2057 (3550)
T ss_pred ccChhHHHHHHHHHHHHHHhcC---------CCchhHHHHhhHHHHHHHhhhhheecccccchHHHHHHHHHHHHHhccC
Q ss_pred chhhhHhhHHHHHHHHHHHHHhhcc-----CCCCCCccchHHHHHHHHHHHhHhhhcCCHHHHHHHHHHHHHHHhccCCC
Q psy5930 1892 PAYVDRFILEFMRVIQRMAREHIAT-----STADAPQQVGGELLIYCLDLVKTRFCSMSQETRKQFIGTIILGLIDKTPD 1966 (2426)
Q Consensus 1892 p~~iD~~l~~lmk~l~kl~keHl~~-----~~~~~~~~~~~~ll~~~leLl~~Rv~~lg~d~Rr~fls~l~~~LiekS~d 1966 (2426)
|+|+|++++++||+|+|+||||++. ...+.+....++++++++++++.|+.++|.+.||.+.++++++|||||+|
T Consensus 2058 ~~~~drLl~~~~r~~~k~a~dhl~~~~~~~~~~~~a~k~~~ell~~slel~~~ri~~l~~~~r~~~~~~~l~~lieks~d 2137 (3550)
T KOG0889|consen 2058 PDYLDRLLPGFMRCFSKAAKDHLSCGAVLNSQLGDASKGRSELLIKSVELGRERIFYLGDSRRKSLSQSVLVLLIEKSSD 2137 (3550)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHhhcccchhhHHHHHHHHHHHhHHHHHHHHHHHhhhhHHHHHHHHHhhcch
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCChhHHHHHHHHHHHHHh-h-cCccHHHHHHHHHHHHhcCCcccCchhhhchhHH
Q psy5930 1967 IKVMKAIIKMTEEWLKVNKVEQNNVPNLKEKCIILVKLMHFVE-K-RFPDLNTMFLEIVLYVYMDENLKNSELVTKLEPA 2044 (2426)
Q Consensus 1967 ~~ll~~Il~iv~~Wv~~~~~~~~~~PtlKEKa~lL~KM~~fe~-r-~~~~L~~~flelV~~Iy~d~~~~~tElt~rLE~a 2044 (2426)
.++|++|++|+++||+++ +.+||.|||+++|+||++|+. | .++++.++|+++|..||+++.+++||+|.|||++
T Consensus 2138 ~~i~~~il~~~~~wi~~~----~~~~t~~ek~all~km~~~~~krf~~~~L~~~~l~~v~~vy~~~~~~~tE~t~rle~~ 2213 (3550)
T KOG0889|consen 2138 ASILRCILKMLKEWIMND----DSFPTVREKLALLLKMLTFEDKRFEDNELLAEFLDLVFTIYRDEIFSNTELTARLERA 2213 (3550)
T ss_pred HHHHHHHHHHHHHHHhcc----ccccchHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH
Q ss_pred HhhccCCCChHHHHHHHHHHhhhhccCHHHHHHHHhhhcCCCccCCcccHHHHHHHHHhhhccccccccccccCCCCCcc
Q psy5930 2045 FLSGLRCSNPALRAKFFQLLNGSIRRLLHDRLLYIFSSQNWEPMGPHYWLKQCIELILVSAISSSKIKLAEETGVLPNIS 2124 (2426)
Q Consensus 2045 FL~Glrs~d~~iR~kF~~i~d~sl~~~l~~RL~YIi~~QnWe~lad~~WLkqal~LLL~~~~~~~~i~l~~~~~~lp~~s 2124 (2426)
||+|||++||.+|+|||++||+|+|++++.||+||+++|+||+++++||||||++||+++++...++++.+++..+.|..
T Consensus 2214 Fl~Glr~s~~~lR~kF~~i~d~S~~~~~~~RL~yil~~q~W~~~~~~~wikqa~~lL~~~~~~~~~~~~~~~~~~v~~~~ 2293 (3550)
T KOG0889|consen 2214 FLLGLRSSDPGIRSKFFDILDSSLPRDLYSRLLYILDSQDWEAISDVFWIKQALMLLLGTINEVKPISLYPNSERVSPLS 2293 (3550)
T ss_pred HHhhhccCCccHHHHHHHHHHhhcchhHHHHHHHHhccccccccccchHHHHHHHHHHHhhhccCCccCCCCcccccCcc
Q ss_pred ccccccCCchhhhhhhhhhhccccccCCCCCCccchhhhhhhcccccccccchhhhhchHHHHHHHHHHHHHHhhccchh
Q psy5930 2125 SVISLAEDPVERENYFNVVLNAADLKTEPNLNGENILESLEEYEFDVDEFGNCRIQQLSREDLLNKQNKFLENAREYNTS 2204 (2426)
Q Consensus 2125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~h~~fl~~~~~~~~~ 2204 (2426)
..........+...-.+ ..+....+++.+|.+|++..++++++
T Consensus 2294 ~~~~~~~~~~~~~s~~~-------------------------------------~~~~~~~~~~~~~~efl~~~~~~~~~ 2336 (3550)
T KOG0889|consen 2294 PSEEQEPSSVESVSKQS-------------------------------------GSELVLSDFVKGHIEFLEANSEYRVA 2336 (3550)
T ss_pred ccccccccccchhhhcc-------------------------------------cHHHHHHHHHHHHHHhhhhhhhhhHH
Q ss_pred hhHHHHHHHhhcChHHHHHHHHHhHHHHhhcCCHHHHHHHhhhhHhhhccccccccccCCCChHHHHHHHhhhcCCCCCC
Q psy5930 2205 DLLVSLAQLCHLDTHLAEKVWLDMFPQMWSILSETQQQNLTDEIIPFIVSGIHVVQKDVHPSSINTIYESLAHCNPPLPI 2284 (2426)
Q Consensus 2205 dil~pL~~L~~~D~~lA~~lWv~lFp~iW~~L~~~eq~~l~~~li~lLsk~~H~rQ~~~~pnviqtlLegi~~c~p~i~l 2284 (2426)
|++.|+.++||.|+.+|+++|+.+||.+|++++++|+.++++++|+|||++||.+|.+++|||+++|++|+++|.|++++
T Consensus 2337 ~~l~~l~~i~~~~~~~a~~~w~~~Fp~~w~~l~~de~~~~~~~~i~flS~~~h~~q~~~~pnvln~~v~s~~~~~~~~~l 2416 (3550)
T KOG0889|consen 2337 DFLDPLLQIQHHDDKVAEKLWVGLFPIVWSSLSKDEIRNLAGSIIPFLSSGYHIKQQGCRPNVLNALVESLVKIVPPIEL 2416 (3550)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcCHhhhhcccchhccccccchhhhhhccchhHHHHHHHHHHhhccCCCC
Q ss_pred ChHHHHHHhhhcCcHHHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHhcCccHHHHHH
Q psy5930 2285 KPAIMTYLGKAQGLWHRVTLSLEKMAVEGLLKQNRMQNRAPSVADCYDFEPDHAPQQQDIIDQLAEMYSALREEDMWFGL 2364 (2426)
Q Consensus 2285 PP~LikyLgkt~naW~~ai~~LE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DaL~eLY~~L~E~D~~~Gl 2364 (2426)
||||+||+||+||+||++|.+||+++. +...++.+.++++.|||+|||++|+|+|||||+
T Consensus 2417 pp~Li~yl~kt~~~wh~~I~lLE~~~~--------------------~~~~~~~~~~~~~~dsl~elY~~L~E~Dm~~Gl 2476 (3550)
T KOG0889|consen 2417 PPHLIKYLGKTYNLWHTSIRLLEDHQS--------------------NKEMENTKGDESCLDSLAELYRSLNEEDMFYGL 2476 (3550)
T ss_pred CHHHHHHHhccchHHHHHHHHHHHHHH--------------------HHHhhhhhhhHHHHHHHHHHHHhhhHHHHHHHH
Q ss_pred HhhhcCchhhHHHHHHHHhccHHHHHHHHHHHHHhhhhcccCCCCCCCChhHHHHHHhhcCC
Q psy5930 2365 WQKNAKHKETLYALAYEQQGFYEQALKAYEVTIKKGLEEYANSPAPISHNSELRLREKQWLR 2426 (2426)
Q Consensus 2365 Wrrra~~~ET~~ALs~EQ~G~w~~AQ~~YE~a~~k~~~~~a~~~~~~~~esEy~LWEdhWi~ 2426 (2426)
|||||+|+||++|+||||+|+|++||+.||+||.| +++++.|++++||++||||||+
T Consensus 2477 wrrr~~~~eT~~a~s~eQ~G~~e~AQ~lyekaq~K-----a~~~~~~~~~~Ey~lWed~WI~ 2533 (3550)
T KOG0889|consen 2477 WRRRAKFPETMVALSYEQLGFWEEAQSLYEKAQVK-----AREGAIPYSESEYKLWEDHWIR 2533 (3550)
T ss_pred HHHhhccHHHHHHHHHHHhhhHHHHhhHHHHHHHH-----HhcccCCCCcHHHHHHHHHHHH
|
|
| >COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0889|consensus | Back alignment and domain information |
|---|
| >KOG1824|consensus | Back alignment and domain information |
|---|
| >KOG2171|consensus | Back alignment and domain information |
|---|
| >COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG1242|consensus | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PF08163 NUC194: NUC194 domain; InterPro: IPR012582 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >PTZ00429 beta-adaptin; Provisional | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >KOG1242|consensus | Back alignment and domain information |
|---|
| >PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region | Back alignment and domain information |
|---|
| >KOG0890|consensus | Back alignment and domain information |
|---|
| >KOG0915|consensus | Back alignment and domain information |
|---|
| >PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms | Back alignment and domain information |
|---|
| >KOG2023|consensus | Back alignment and domain information |
|---|
| >KOG1248|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 79.5 bits (195), Expect = 1e-14
Identities = 96/652 (14%), Positives = 205/652 (31%), Gaps = 173/652 (26%)
Query: 1820 LVHALLCRLMSTFPTEPISSNVASKREELDHLYVCVSKVIYEGLSNYEKNPTATCSTLYG 1879
V C+ + P +S EE+DH+ + K+ + L+
Sbjct: 29 FVDNFDCKDVQDMPKSILSK------EEIDHIIM-------------SKDAVSGTLRLFW 69
Query: 1880 TVMMLKAACMNHPAYVDRFILEFMR-----VIQRMAREHIATSTADAPQQVGGELLIYCL 1934
T+ V +F+ E +R ++ + E S + I
Sbjct: 70 TL------LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT-------RMYIEQR 116
Query: 1935 DLVKTRFCSMSQE------TRKQFIGTIILGLIDKTPDIKV----MKAIIKMTEEWLKVN 1984
D R + +Q +R Q + L++ P V + K W+
Sbjct: 117 D----RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK---TWV-AL 168
Query: 1985 KVEQNNVPNLKEKCIILVKLMHFVEKRFPDLNTMF---------LEIVLYVYMDENLKNS 2035
V + + V+ + +F E VL E L+
Sbjct: 169 DVCLS----------------YKVQCKMD--FKIFWLNLKNCNSPETVL-----EMLQK- 204
Query: 2036 ELVTKLEPAFLSGL-RCSNPALRAKFFQLLNGSIRRLLHDR-----LLY---IFSSQNWE 2086
L+ +++P + S SN LR + +RRLL + LL + +++ W
Sbjct: 205 -LLYQIDPNWTSRSDHSSNIKLR---IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260
Query: 2087 PMGPHYWLKQCIELILVSAISSSKIKLAEETGVLPNISSVISLAEDPVERENYFNVVLN- 2145
C L+ + A T + ++L D E ++ L+
Sbjct: 261 AFNL-----SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD--EVKSLLLKYLDC 313
Query: 2146 -AADLKTE-----P---NLNGENILESLEEYEFDVDEFGNCRIQQLSREDLLNKQNKFLE 2196
DL E P ++ E+I + L ++ + ++ + L L
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWD---------NWKHVNCDKLTTIIESSLN 364
Query: 2197 NAREYNTSDLLVSLAQLCHLDTHLAEKV----WLDMFPQ-MWSILSETQQQNLTDEIIPF 2251
+ L+ H+ + W D+ + ++++ + +L ++
Sbjct: 365 VLEPAEYRKMFDRLSVF-PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 2252 IVSGIHVVQ----------KDVHPSSINTIYESL-AHCNPPLPIKPA---IMTYLG---- 2293
I + +H S ++ Y + L +++G
Sbjct: 424 STISIPSIYLELKVKLENEYALHRSIVDH-YNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
Query: 2294 KAQ-----GLWHRVTLSLE----KMAVEGLLKQNRMQNRAPSVADCYDFEP---DHAPQQ 2341
+ L+ V L K+ + N + ++ ++P D+ P+
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQKIRHDSTA-WNASGSILNTLQQLKFYKPYICDNDPKY 541
Query: 2342 QDIIDQLAEMYSALREEDMWFGLWQKNAKHKETL-YALAYEQQGFYEQALKA 2392
+ +++ + + + EE++ +K+ + L AL E + +E+A K
Sbjct: 542 ERLVNAILDFLPKI-EENLI------CSKYTDLLRIALMAEDEAIFEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2426 | |||
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 98.65 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.4 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 98.38 | |
| 2bpt_A | 861 | Importin beta-1 subunit; nuclear transport, nucleo | 98.37 | |
| 1qgr_A | 876 | Protein (importin beta subunit); transport recepto | 98.36 | |
| 4fdd_A | 852 | Transportin-1; heat repeats, karyopherin, nuclear | 98.22 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 98.17 | |
| 1u6g_C | 1230 | TIP120 protein, CAND1; cullin repeat, heat repeat, | 97.82 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 97.77 | |
| 1b3u_A | 588 | Protein (protein phosphatase PP2A); scaffold prote | 97.72 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 96.22 | |
| 2x1g_F | 971 | Cadmus; transport protein, developmental protein, | 95.67 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 95.41 | |
| 1ibr_B | 462 | P95, importin beta-1 subunit, nuclear factor; smal | 95.22 | |
| 3ibv_A | 980 | Exportin-T; karyopherin, heat repeat, cytoplasm, n | 95.21 | |
| 2z6g_A | 780 | B-catenin; FULL-length, beta-catenin, cell adhesio | 95.06 | |
| 2qk2_A | 242 | LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 | 95.01 | |
| 2z6h_A | 644 | Catenin beta-1, beta-catenin; C-terminal domain, a | 94.09 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 93.57 | |
| 1jdh_A | 529 | Beta-catenin; beta-catenin, protein-protein comple | 92.2 | |
| 2vgl_B | 591 | AP-2 complex subunit beta-1; cytoplasmic vesicle, | 91.78 | |
| 3m1i_C | 1049 | Exportin-1; heat repeat, GTP-binding, nucleotide-b | 91.62 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 91.08 | |
| 2jdq_A | 450 | Importin alpha-1 subunit; transport, PB2 subunit, | 90.66 | |
| 2x19_B | 963 | Importin-13; nuclear transport, protein transport; | 90.49 | |
| 3ul1_B | 510 | Importin subunit alpha-2; arm repeat, armadillo re | 90.42 | |
| 2x1g_F | 971 | Cadmus; transport protein, developmental protein, | 89.89 | |
| 4hat_C | 1023 | Exportin-1; heat repeat, nuclear export, RAN-ranbp | 88.7 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 88.52 | |
| 2vgl_A | 621 | Adaptor protein complex AP-2, alpha 2 subunit; cyt | 88.49 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 88.28 | |
| 3m1i_C | 1049 | Exportin-1; heat repeat, GTP-binding, nucleotide-b | 87.75 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 87.36 | |
| 2qk1_A | 249 | Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h | 86.73 | |
| 2iw3_A | 986 | Elongation factor 3A; acetylation, ATP-binding, pr | 86.48 | |
| 4b8j_A | 528 | Importin subunit alpha-1A; transport protein, nucl | 85.06 | |
| 1wa5_C | 960 | Importin alpha RE-exporter; nuclear transport/comp | 84.96 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 84.61 | |
| 1w63_A | 618 | Adapter-related protein complex 1 gamma 1 subunit; | 82.86 | |
| 1wa5_B | 530 | Importin alpha subunit; nuclear transport/complex, | 82.32 | |
| 3tpo_A | 529 | Importin subunit alpha-2; nuclear import, protein | 80.84 | |
| 4db6_A | 210 | Armadillo repeat protein; solenoid repeat, armadil | 80.28 |
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
Probab=98.65 E-value=4.8e-05 Score=105.04 Aligned_cols=539 Identities=11% Similarity=0.073 Sum_probs=314.9
Q ss_pred HHHHHHHHhhhcCccchhhhHHhhhhhccccccc----cccCCcchhhHHHHHHhcC---CchhHHhhhhhhhhhhccCC
Q psy5930 436 NLLQGLNSLQSGLHKQQMKDLFVELCLTVPVRLS----SLLPYLPMLMDPLVSALNG---SSTLISQGLRTLELCVDNLQ 508 (2426)
Q Consensus 436 ~lLe~Ln~Ll~~~~~~~~RdL~VELCLTVPvRLS----~LLPyL~~LM~PLV~AL~~---~~eLvsqGLRTLElcVDNLt 508 (2426)
.++..|...+.+..+++.|+..++.+-.+.-.+. .+-||.+.+++.++..|+. ++++-..++++|--|+..+
T Consensus 134 ~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~- 212 (861)
T 2bpt_A 134 ELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFI- 212 (861)
T ss_dssp HHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGC-
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCChhhhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-
Confidence 3333343444333245556655554444433322 2578999999999999976 4568888999887776432
Q ss_pred cchhhhccc--hHHHHHHHHHHhhcCCCCchhhHHHHHHhhccCCCcccccccCCCCccccccCCCCeEEEEecCCCccc
Q psy5930 509 PDFLYDHIQ--PVRADLMQALWRSLRSPNEQVAHVAYRVLGKFGGGNRKMMIEPQKLDYNIRRSNGPAVVVHFPEHQKTI 586 (2426)
Q Consensus 509 pdfLdp~~~--pV~~elm~ALw~~Lkp~~~~~~~~a~RILGKLGGrNR~~L~~p~~L~~~~~~~~~~~~~~~f~~~~~~~ 586 (2426)
...+. .....++..|...+...+...-..|+++|+++...+-..+.+
T Consensus 213 ----~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~~~~--------------------------- 261 (861)
T 2bpt_A 213 ----KNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKP--------------------------- 261 (861)
T ss_dssp ----HHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHH---------------------------
T ss_pred ----HHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 22221 124568888888887667778889999999998654222110
Q ss_pred ccchh-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhcccCCCChhHHHhhhcCCCCCCCCCCCCcccccCChhHHHH
Q psy5930 587 NLSVE-KAIDVAITVLKNPAVDMFYRKQGWKVVKGYIISSMNLSDNRSTIQKLFSHPSFGNTESSQGTMYKYADPTIRNT 665 (2426)
Q Consensus 587 ~lpl~-~~i~~A~~~l~~~~~d~~yr~~A~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 665 (2426)
-+. ..+......+. ..|...|..|++++.++.-...... ...- .. +.. .. . +. ...+..
T Consensus 262 --~l~~~l~~~~~~~~~--~~~~~vr~~a~~~l~~l~~~~~~~~-----~~~~-~~---~~~-~~---~--~~-~~~~~~ 321 (861)
T 2bpt_A 262 --YMEQALYALTIATMK--SPNDKVASMTVEFWSTICEEEIDIA-----YELA-QF---PQS-PL---Q--SY-NFALSS 321 (861)
T ss_dssp --HHHHTHHHHHHHHTT--CSSHHHHHHHHHHHHHHHHHHHHHH-----HHHH-HC---TTC-SC---C--CC-CHHHHH
T ss_pred --HHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHHHHhhh-----hhhh-hc---cCC-ch---h--hH-HHHHHH
Confidence 012 34444445554 3567789999999987544321000 0000 00 000 00 0 00 111333
Q ss_pred HHHHHHHHHHHhcc---------hhHHHhHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccCCCChHHHHHHHHHhhc
Q psy5930 666 HQNALTGIFMVYLI---------KELRKDSLLYTVLVVRHYTLVAITQQTGPFPLYGKSALLEGTMDPLVLIDAIAVILG 736 (2426)
Q Consensus 666 ~~~ll~~~f~a~~~---------~~l~~~a~~f~~~v~rhf~l~~i~~~~~~~~~~~~~~~~~~~ld~~vl~DAi~~~l~ 736 (2426)
+..++..++..... ...+..|...+..++.++- .. + -..+++.+...+.
T Consensus 322 ~~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~-----~~----------------~-~~~l~~~l~~~l~ 379 (861)
T 2bpt_A 322 IKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCG-----NH----------------I-LEPVLEFVEQNIT 379 (861)
T ss_dssp HHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHG-----GG----------------G-HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHcc-----Hh----------------H-HHHHHHHHHHHcC
Confidence 44455554433321 2466666667766665531 00 0 1237788888899
Q ss_pred CCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCchhhhhHhHHHHHHHHHHhchHHHH-HHHH
Q psy5930 737 HEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYERAWYAKLGGCYAIKFFYNTMAIKWV-YSHM 815 (2426)
Q Consensus 737 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~~w~~K~gG~~gi~~l~~~~~~~wl-~~~~ 815 (2426)
+.+...+++|..++..+.+ |..... -.+.+..++..+++.+.++.+..+.+++.++.-+.+.++.... ..+.
T Consensus 380 ~~~~~~r~~a~~~l~~i~~------~~~~~~-~~~~l~~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~ 452 (861)
T 2bpt_A 380 ADNWRNREAAVMAFGSIMD------GPDKVQ-RTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHL 452 (861)
T ss_dssp CSSHHHHHHHHHHHHHTSS------SSCHHH-HHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTH
T ss_pred CCChhHHHHHHHHHHHHHc------CCCHHH-HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHH
Confidence 9888999999888876643 221111 1366778899999999999999999999988888876643210 2345
Q ss_pred HHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcCCC--ChHHHHH
Q psy5930 816 FVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNITLP--NDLLREQ 893 (2426)
Q Consensus 816 ~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~s~--n~~VR~~ 893 (2426)
..++.+++..++|- ..+...|-.++..+.+.|... ..+ .. ...+..++..++.-+.++ +..||.+
T Consensus 453 ~~~l~~l~~~l~~~-----~~v~~~a~~al~~l~~~~~~~-~~~------~l-~~~~~~il~~L~~~l~~~d~~~~vr~~ 519 (861)
T 2bpt_A 453 PGVVQACLIGLQDH-----PKVATNCSWTIINLVEQLAEA-TPS------PI-YNFYPALVDGLIGAANRIDNEFNARAS 519 (861)
T ss_dssp HHHHHHHHHHHTSC-----HHHHHHHHHHHHHHHHHHSSS-SSC------GG-GGGHHHHHHHHHHHHTCSCCGGGHHHH
T ss_pred HHHHHHHHHHhccC-----hHHHHHHHHHHHHHHHhcccc-cch------hh-HHHHHHHHHHHHHHHhCcCcchHHHHH
Confidence 67788888888773 345666777777777776420 001 11 234666777777777643 4789999
Q ss_pred HHHHHHHHHHHhCCchhhccccchhhhhccCCCCccccccC--------------chhhhHhhhhhhhhhccc-CCCccc
Q psy5930 894 SMYLLQVFAETQGKSVVQVMEPHKDVLADIIPPKKLLIRNH--------------SANAQIGLMEGNTFCQSL-TPRLFT 958 (2426)
Q Consensus 894 aq~~L~~lae~t~~~v~ell~p~k~~Ll~~I~~Kpl~lRal--------------pf~~QIG~idaitfcl~L-~p~~l~ 958 (2426)
+-+++..+++..+..+. |+-+.++.+++.. + .+.+ .-..|.+.++++..+..- .+.+.+
T Consensus 520 a~~al~~l~~~~~~~~~----~~~~~l~~~l~~~-l-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 593 (861)
T 2bpt_A 520 AFSALTTMVEYATDTVA----ETSASISTFVMDK-L-GQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEP 593 (861)
T ss_dssp HHHHHHHHHHHCCGGGH----HHHHHHHHHHHHH-H-HHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGG
T ss_pred HHHHHHHHHHHcchhhH----HHHHHHHHHHHHH-H-HHHHhhhcccCChhhHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 99999999998886432 2222222222211 0 0111 123456777777665443 332222
Q ss_pred cCcchhhHHHHHHHHHHhhccCchhhhcCCCCCCccccchHHHHHHHHHHhh---hc--CCchhhHHHHHHHHhhcCCCH
Q psy5930 959 TDMSIHEHSSFFQEITNICESSDQALMKLPCYKPISSLVPLRKAAMRALASW---HY--VPNCSQKIFNTLFAALERPNP 1033 (2426)
Q Consensus 959 ~~~~~~el~rll~E~l~LadadD~~l~k~~~~k~~~~lv~LRv~ci~lL~~~---~~--~~~~~~rIi~vfFKsL~s~s~ 1033 (2426)
+- +++...+.+++. ..+. . .+|..++.+++.. .. +..+-.+|+..+++.|..+++
T Consensus 594 ~~---~~l~~~l~~~l~---~~~~-----------~---~v~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~ 653 (861)
T 2bpt_A 594 VA---DMLMGLFFRLLE---KKDS-----------A---FIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDS 653 (861)
T ss_dssp GH---HHHHHHHHHHHH---STTG-----------G---GTHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHCTTS
T ss_pred HH---HHHHHHHHHHHc---cCCC-----------C---cHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccH
Confidence 22 333333333332 2111 0 3566666655432 22 112345889999999988899
Q ss_pred HHHHHHHHHHHHHHccCCCC-hhhHHHhhHHHHhhhcCC---CCCCHhHHHHHHHhhhhCCCccc
Q psy5930 1034 ELQEAAFQAMKTFVNGSPID-LKSVYEVMKPLLLTLGDY---RNLNLVTARKLSYIVQPFPSSFS 1094 (2426)
Q Consensus 1034 ei~~aA~~gLk~vL~~~~~~-~e~L~q~LRPiL~nLsD~---k~Ltv~gLegLarLLeLL~nyFk 1094 (2426)
++..+|..++..+...-.-. ...+..-+.+++.++.|. .......+..|+.+.+-.+.-|.
T Consensus 654 ~vr~~a~~~l~~l~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~vr~~~~~~l~~l~~~~~~~~~ 718 (861)
T 2bpt_A 654 PVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFI 718 (861)
T ss_dssp HHHHHHHHHHHHHHHHTGGGGHHHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHGGGGH
T ss_pred HHHHHHHHHHHHHHHHhchhccchHHHHHHHHHHHhCCccccHhhhHHHHHHHHHHHHHhhhhHH
Confidence 99999999998877543211 222333366677777764 55667788888888887655553
|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
| >2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A | Back alignment and structure |
|---|
| >1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
| >1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
| >1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A | Back alignment and structure |
|---|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
| >2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A | Back alignment and structure |
|---|
| >3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* | Back alignment and structure |
|---|
| >2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} | Back alignment and structure |
|---|
| >2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
| >1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A | Back alignment and structure |
|---|
| >2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B | Back alignment and structure |
|---|
| >3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B | Back alignment and structure |
|---|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
| >2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A | Back alignment and structure |
|---|
| >2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B | Back alignment and structure |
|---|
| >3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... | Back alignment and structure |
|---|
| >2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
| >2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A | Back alignment and structure |
|---|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
| >3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B | Back alignment and structure |
|---|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A | Back alignment and structure |
|---|
| >4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A | Back alignment and structure |
|---|
| >1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A | Back alignment and structure |
|---|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
| >1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 | Back alignment and structure |
|---|
| >1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A | Back alignment and structure |
|---|
| >3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B | Back alignment and structure |
|---|
| >4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 2426 | ||||
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 7e-05 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (107), Expect = 7e-05
Identities = 122/1060 (11%), Positives = 301/1060 (28%), Gaps = 66/1060 (6%)
Query: 1014 PNCSQKIFNTLFAALERPNPELQEAAFQAMKTFVN-GSPIDLKSVYEVMKPLLLTLGDYR 1072
+ +K+ + LE N E+Q A + + V+ ++++ + + +L+ D
Sbjct: 40 DDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLS--DKE 97
Query: 1073 NLNLVTARKLSYIVQPFPSSFSEKLCEQLLVNLKNLFENIVAQKENPPKNSETEKIIVVI 1132
L +++ L ++ P + S + K + + + S + + ++
Sbjct: 98 QLRDISSIGLKTVIGELPPASSGSALAANV--CKKITGRLTSAIAKQEDVSVQLEALDIM 155
Query: 1133 IGIFKESPAAKAQFIEPLISLILEN-------------------EHALSIGPYSPYREPL 1173
+ F +++ +L + + E L
Sbjct: 156 ADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHL 215
Query: 1174 VKYLLRYPTETLQS----MLSEIHMKDPLWRNFFVYLIKHQEGKCFRDALQTQFVDRLIL 1229
+ L + + + ++ I + ++ I K D L
Sbjct: 216 LSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVD-----DDELRE 270
Query: 1230 YTFSAINPNCTNLTTAEKLEMQYIGIRLVSILIKLDTKWLSSQNQLISVMQKIWCDDEYL 1289
Y A + I + L +++ + M DD+
Sbjct: 271 YCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQ 330
Query: 1290 QRHRNVENISYVHWKEPKLLVKILLHYFSHHRHIIDLLFFILRAVTERLLPDFTFLREFL 1349
+ + WK + K L S +L + V+ L+ F E +
Sbjct: 331 GSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHE---MLPEFYKTVSPALISRFKEREENV 387
Query: 1350 ETTVAQTYSIEWKRKAFLRFLELFKLALVSQELKAKILQLVL---IPCLTVCFERGEGDK 1406
+ V Y K+ ++ A+ E +LQ + + L +
Sbjct: 388 KADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKT 447
Query: 1407 LIGGTGLPEDEDNKNANLVNEFIAKIISPITESPPVFVISDNVRILLLQMCCLIVEQSYH 1466
+ + N + + I ++ I S S N++I L +I+
Sbjct: 448 RQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSP 507
Query: 1467 YVYNVSQGKILVNKAKPLIMFAWQLSLLGKNFVDPATRYHGHLLLAHMIAKFGVSQRVVV 1526
V++ ++ + ++++ + L + +
Sbjct: 508 QVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFT 567
Query: 1527 QVFLGLLRAHA-SEVRPIVRQALEILTPAFPGRVDDGQRMLLVYTKKILVEEGHSNPQLS 1585
L A EV+ + + + L + L E +
Sbjct: 568 CTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVK 627
Query: 1586 HVLTLIVKHYKVYY-PVRHGLIQQMIASMQRLGFSSSAMDHKKLSVELADVIIKWELQRV 1644
+ + K+ PV + + + +++ + L + + + +
Sbjct: 628 ALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMI 687
Query: 1645 KEEAEGTSGGKAIQEPPRKKMALESFAPGESSMKYDIPTASKPIEKVHADAVINFLARLS 1704
+ + + +MA+ + S I + L R
Sbjct: 688 DAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILN-----ELIGLVRSP 742
Query: 1705 CQVSDLPPNLSSSMQSQVIQTPGEMLARRCVSLIRMALKPEVWSHQNTEFKLTWLDKVLS 1764
+ Q+ V+ + + ++ + + + + + + K ++
Sbjct: 743 LLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQS-YYSIAKCVA 801
Query: 1765 SIDQPTANLGNISIALELLTLLITILDEGQILHIIKPLQRGLVACISSSITKVIRLVHAL 1824
++ + G + + + + + L + L S ++ ++
Sbjct: 802 ALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEA 861
Query: 1825 LCRLMSTFPTEPISSNVASKREELDHLYVC-VSKVIYEGLSNYEKNPTATCSTLYGTVMM 1883
P+E + S + L + V + + + L P L+ +
Sbjct: 862 FSS-----PSEEVKSAAS---YALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEI 913
Query: 1884 LKAACMNHPAYVDRFILEFMRVIQRMAREHIATSTADAPQQVGGELLIYCLDLVKTRFCS 1943
+ +A + I + A E A+ ++ L +K S
Sbjct: 914 ISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLIS 973
Query: 1944 MSQETRKQFIGTIILGLIDKTPDIK-VMKAIIKMTEEWLKVNKVEQNNVPNLKEKCIILV 2002
S R + + + D I ++K I + L P+L + + LV
Sbjct: 974 GSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTL--------EDPDLNVRRVALV 1025
Query: 2003 KLMHFVEKRFPDLNTMFLEIVLYVYMDENLKNSELVTKLE 2042
+ P L L+ VL +E EL+ ++E
Sbjct: 1026 TFNSAAHNK-PSLIRDLLDTVLPHLYNETKVRKELIREVE 1064
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2426 | |||
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.9 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 97.81 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 97.46 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.18 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 97.03 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 96.63 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 96.39 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 95.98 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 95.66 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 94.5 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 93.85 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 93.6 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 93.59 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 83.77 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 80.9 |
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.90 E-value=0.035 Score=75.97 Aligned_cols=163 Identities=10% Similarity=0.083 Sum_probs=88.9
Q ss_pred HHHHHHHhhcCCChhhhhHHHHHHHHHHHHHHHhhCCchhhcchhhHHHHHHHHHHhccCc--hhhhhHhHHHHHHHHHH
Q psy5930 727 LIDAIAVILGHEDKELCKPGYIALKCIMETATCITGSIENACNLPLMEYLAERMCNLCYER--AWYAKLGGCYAIKFFYN 804 (2426)
Q Consensus 727 l~DAi~~~l~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~p~~~~L~~rf~~~Cy~~--~w~~K~gG~~gi~~l~~ 804 (2426)
+...+..++.+....++..+..++..+........ ........+.+..+.......+... ..-.+.+...++..++.
T Consensus 517 l~~~~~~~~~~~~~~i~~~al~~~~~l~~~l~~~~-~~~~~~~~~~~~~l~~~~~~~l~~~~~~~e~~~~al~~l~~l~~ 595 (1207)
T d1u6gc_ 517 LVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLD-QPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIIC 595 (1207)
T ss_dssp THHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCCSS-SCCCCCCHHHHHHHHHHHHHHHSCSSSCHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHccccHHHHHHHHHHHHHHHHHhhhhc-cchhhhhHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 56777888888888888877777776666432221 1111223455666666655555432 23334444444555555
Q ss_pred hchHHHHHHHHHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHcCCCCCCCchhhhhhhhhhHHHHHHHHhhhcC
Q psy5930 805 TMAIKWVYSHMFVFVKALLFVMMDLTGEVSSGAIDEARRNLKQLIVLCATPIKEPVDAETLTVQSKALSEVTNELTRNIT 884 (2426)
Q Consensus 805 ~~~~~wl~~~~~~ivraLlfvlkD~p~e~~~~~~~~a~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~eL~ 884 (2426)
..+.. +......++..++-.+.+ +. ....|-..+..+. ....... . ...+..++..+...+.
T Consensus 596 ~~~~~-~~~~~~~~l~~l~~~l~~---~~---~r~~a~~~l~~i~---~~~~~~~-------~-~~~l~~~~~~l~~~l~ 657 (1207)
T d1u6gc_ 596 NLGDN-LGSDLPNTLQIFLERLKN---EI---TRLTTVKALTLIA---GSPLKID-------L-RPVLGEGVPILASFLR 657 (1207)
T ss_dssp HTGGG-CCTHHHHHHHHHHHHTTS---SS---HHHHHHHHHHHHT---TCSSCCC-------C-HHHHHHHHHHHHHHTT
T ss_pred Hhhhh-hHHHHHHHHHHHHHHhcc---hh---hHHHHHHHHHHHH---Hhccchh-------H-HHHHHHHHHHHHHhcc
Confidence 54321 111223344444444433 22 1223333332222 1111111 1 1236677788888999
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCc
Q psy5930 885 LPNDLLREQSMYLLQVFAETQGKS 908 (2426)
Q Consensus 885 s~n~~VR~~aq~~L~~lae~t~~~ 908 (2426)
+.+..+|.++..+|..+.+..+..
T Consensus 658 ~~~~~~r~~al~~L~~l~~~~~~~ 681 (1207)
T d1u6gc_ 658 KNQRALKLGTLSALDILIKNYSDS 681 (1207)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCCTT
T ss_pred cchHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999888776543
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|