Psyllid ID: psy5937

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
Protein Sequence
MAYSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKHTTPPSRHLSSRDLRAVWLS
Secondary Structure (PSIPRED)
ccccEEEEEEEEcEEEEEcccccccccEEEEEEEEEccccccccccEEEEEEEEcccccccEEEEEccccEEEEccccEEEEEEEEEEEccccccccEEEEEccccccccccEEEEEccccccccccccEEEEEEcccccccccEEEcccEEEEEccccEEEEEEEEEEEccccccEEEEEccccccccccccccccEEcc
Secondary Structure Prediction (SSPRO)
cccEEEEEEEEEccEEEEcccccccccccEEEEEEEccccccHHHHEEEEEEEEccccccccEEEEcccEEEEEcccEEEEEEEEEEEccccccccccccccccccccccEEEEEEEccccccHHHHEEEEEEEcccccccccEEEEcccEEEEEccccEEEEEEEEEEEcccccccEEEEEcccccccEEHHHHHHHHcc
Coil and Loop (DISEMBL)
MAYSNVKITLEIGHEasvrnkrtpegfthdWEVFVRgvdnadihNFIDKVVFHLhetfpkpkrilkeppyvvkesgyagftlpievygdlivpkskrttyifikpegfthdwEVFVRgvdnadihNFIDKVVFHLhetfpkpkrilkeppyvvkesgyagftLPIEVYLknnneprkirrkhttppsrhlssrDLRAVWLS
Flexible Loop (DISEMBL)
maysnvkitleigheasvrnkrtpegfthDWEVFVRGVDNADIHNFIDKVVFHLHEtfpkpkrilkeppyVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIkpegfthdwEVFVRGVDNADIHNFIDKVVFHLHEtfpkpkrilkeppyvVKESGYAGFTLPIEVYLknnneprkirrkhttppsrhlssrdlravwls
Low Complexity Region (SEG)
MAYSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKHTTPPSRHLSSRDLRAVWLS
Disordered region (IsUnstruct)
*******ITLEIG**********PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLK*******************************
Disordered Region (DISOPRED)
****NVK*TLEIGHEASVR******GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKHTTPPSRHLSSRDLRAVWLS
Disordered Region (DISEMBL)
MAYSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKI***********************
Disordered Region (DISPRO)
*AYSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKHTTPPSRHLSSRDLRAVWLS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAYSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKHTTPPSRHLSSRDLRAVWLS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	201	2.2.26 [Sep-21-2011]
A2AM29	569	Protein AF-9 OS=Mus muscu	yes	N/A	0.532	0.188	0.590	8e-29
P42568	568	Protein AF-9 OS=Homo sapi	yes	N/A	0.432	0.153	0.659	1e-28
Q03111	559	Protein ENL OS=Homo sapie	no	N/A	0.407	0.146	0.634	4e-27
P53930	226	Protein AF-9 homolog OS=S	yes	N/A	0.358	0.318	0.458	1e-11
Q755P0	208	Protein AF-9 homolog OS=A	yes	N/A	0.358	0.346	0.430	1e-10
Q6CIV8	220	Protein AF-9 homolog OS=K	yes	N/A	0.333	0.304	0.432	3e-10
Q6FXM4	221	Protein AF-9 homolog OS=C	yes	N/A	0.323	0.294	0.446	5e-10
Q10319	217	Protein AF-9 homolog OS=S	yes	N/A	0.333	0.308	0.388	8e-10
Q4WPM8	252	Protein AF-9 homolog OS=N	yes	N/A	0.343	0.273	0.416	8e-10
Q5BC71	275	Protein AF-9 homolog OS=E	yes	N/A	0.323	0.236	0.455	1e-09

>sp|A2AM29|AF9_MOUSE Protein AF-9 OS=Mus musculus GN=Mllt3 PE=1 SV=1

 Score =  126 bits (317), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 3/110 (2%)

Query: 1   MAYSN-VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP 59
           MA S  V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP
Sbjct: 1   MASSCAVQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFP 60

Query: 60  KPKRILKEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
           +PKR+ K+PPY V+ESGYAGF LPIEVY  +   PK  R  Y +F+  EG
Sbjct: 61  RPKRVCKDPPYKVEESGYAGFILPIEVYFKNKEEPKKVRFDYDLFLHLEG 110

Mus musculus (taxid: 10090)

>sp|P42568|AF9_HUMAN Protein AF-9 OS=Homo sapiens GN=MLLT3 PE=1 SV=2

 Score =  126 bits (316), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)

Query: 1  MAYSN-VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP 59
          MA S  V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP
Sbjct: 1  MASSCAVQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFP 60

Query: 60 KPKRILKEPPYVVKESGYAGFTLPIEVY 87
          +PKR+ K+PPY V+ESGYAGF LPIEVY
Sbjct: 61 RPKRVCKDPPYKVEESGYAGFILPIEVY 88

Homo sapiens (taxid: 9606)

>sp|Q03111|ENL_HUMAN Protein ENL OS=Homo sapiens GN=MLLT1 PE=1 SV=2

 Score =  120 bits (302), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 67/82 (81%)

Query: 6  VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
          V++ LE+GH A +R K T EGFTHDW VFVRG +  DI +F++KVVF LH++FPKP+R+ 
Sbjct: 7  VQVRLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVC 66

Query: 66 KEPPYVVKESGYAGFTLPIEVY 87
          KEPPY V+ESGYAGF +PIEV+
Sbjct: 67 KEPPYKVEESGYAGFIMPIEVH 88

Capable of activating transcription from synthetic reporter genes in both lymphoid and myeloid cells.

Homo sapiens (taxid: 9606)

>sp|P53930|AF9_YEAST Protein AF-9 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAF9 PE=1 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%)

Query: 16 ASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKES 75
           SV+    P   TH W +FVRG  N DI  FI KVVF LH+T+P P R ++ PP+ + E+
Sbjct: 28 GSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTET 87

Query: 76 GYAGFTLPIEVY 87
          G+  F + I+VY
Sbjct: 88 GWGEFDINIKVY 99

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q755P0|AF9_ASHGO Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YAF9 PE=3 SV=1

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 43/72 (59%)

Query: 16 ASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKES 75
            VR    P   TH W +FVRG    DI  FI KVVF LHET+P P R++  PP+ + E+
Sbjct: 28 GDVRPAIAPSEHTHMWTIFVRGPQGEDISYFIKKVVFKLHETYPNPVRVVDAPPFELTET 87

Query: 76 GYAGFTLPIEVY 87
          G+  F + ++V+
Sbjct: 88 GWGEFEINVKVH 99

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q6CIV8|AF9_KLULA Protein AF-9 homolog OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YAF9 PE=3 SV=1

 Score = 65.1 bits (157), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 43/67 (64%)

Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
           P+  TH W +FVR     DI  FI KVVF LHET+P P R+++ PP+ + E+G+  F + 
Sbjct: 37  PKDHTHLWTIFVRDPRGEDISYFIKKVVFKLHETYPNPVRVIEAPPFELTETGWGEFEIN 96

Query: 165 IEVYLKN 171
           I++Y  +
Sbjct: 97  IKIYFAD 103

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q6FXM4|AF9_CANGA Protein AF-9 homolog OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YAF9 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 40/65 (61%)

Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
           P   TH W +FVR     DI  FI KVVF LHET+P P R ++ PP+ + E+G+  F + 
Sbjct: 36  PSEHTHLWTIFVRSPTGDDISYFIKKVVFKLHETYPNPVRTIEAPPFELTETGWGEFDIN 95

Query: 165 IEVYL 169
           I++Y 
Sbjct: 96  IKIYF 100

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|Q10319|AF9_SCHPO Protein AF-9 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yaf9 PE=3 SV=1

 Score = 63.5 bits (153), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 21 KRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGF 80
          ++ P   TH W +FV GVD  DI  ++ KVVF LH+T+  P R ++ PP+ V E+G+  F
Sbjct: 31 EKAPTDHTHTWRIFVEGVDGEDISKWVRKVVFKLHDTYNNPTRTIESPPFEVIETGWGEF 90

Query: 81 TLPIEVY 87
           + + ++
Sbjct: 91 DIMVRIF 97

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q4WPM8|AF9_ASPFU Protein AF-9 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yaf9 PE=3 SV=2

 Score = 63.5 bits (153), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 3/72 (4%)

Query: 24  PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 83
           P   TH W VFV+GV++ DI  ++ KV F LHET+ +  R +++PP+ V E+G+  F + 
Sbjct: 38  PADHTHQWRVFVKGVNDEDISYWLKKVQFKLHETYAQNVRTIEQPPFEVTETGWGEFEIQ 97

Query: 84  IEVYGDLIVPKS 95
           I++Y    VP+S
Sbjct: 98  IKLY---FVPES 106

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q5BC71|AF9_EMENI Protein AF-9 homolog OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yaf9 PE=3 SV=1

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)

Query: 28  THDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 87
           TH W V+VRGV+  DI  +I KV F LHET+ +  R ++ PPY V E+G+  F + I++Y
Sbjct: 42  THQWRVYVRGVNGEDISYWIKKVQFKLHETYVQNVRTVEHPPYEVTETGWGEFEIQIKIY 101

Query: 88  GDLIVPKS 95
               VP+S
Sbjct: 102 ---FVPES 106

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
193688382	614	PREDICTED: hypothetical protein LOC10016	0.432	0.141	0.804	2e-36
242013094	688	Neurofilament triplet M protein, putativ	0.432	0.126	0.747	4e-35
357630519	747	hypothetical protein KGM_00180 [Danaus p	0.562	0.151	0.591	4e-32
270000916	607	hypothetical protein TcasGA2_TC011185 [T	0.407	0.135	0.743	1e-31
189241557	1263	PREDICTED: similar to GA21032-PA [Tribol	0.472	0.075	0.687	3e-31
347967231	1051	AGAP002132-PA [Anopheles gambiae str. PE	0.502	0.096	0.551	1e-30
332019258	735	Protein ENL [Acromyrmex echinatior]	0.407	0.111	0.731	2e-30
307196972	745	Protein ENL [Harpegnathos saltator]	0.407	0.110	0.731	3e-30
328779244	741	PREDICTED: hypothetical protein LOC72420	0.407	0.110	0.682	4e-30
340723812	737	PREDICTED: hypothetical protein LOC10064	0.407	0.111	0.670	7e-30

>gi|193688382|ref|XP_001948717.1| PREDICTED: hypothetical protein LOC100166578 [Acyrthosiphon pisum]

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/87 (80%), Positives = 78/87 (89%)

Query: 1  MAYSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK 60
          MA+  VK+  EIGHEASVRNKRTPEGFTHDWE+FVRG DN DIH FIDKVVFHLH+TFP 
Sbjct: 9  MAFPYVKVIFEIGHEASVRNKRTPEGFTHDWELFVRGADNTDIHFFIDKVVFHLHDTFPN 68

Query: 61 PKRILKEPPYVVKESGYAGFTLPIEVY 87
          PKR++KEPPYVVKESGYAGF LPI++Y
Sbjct: 69 PKRVVKEPPYVVKESGYAGFPLPIDIY 95

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013094|ref|XP_002427250.1| Neurofilament triplet M protein, putative [Pediculus humanus corporis] gi|212511583|gb|EEB14512.1| Neurofilament triplet M protein, putative [Pediculus humanus corporis]

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 65/87 (74%), Positives = 77/87 (88%)

Query: 1  MAYSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK 60
          M+ ++V++  EIGHEASVR K+TPEGFTHDWEVFVRG DN DI  F+DKVVFHLHETFPK
Sbjct: 1  MSLASVRVQFEIGHEASVRTKKTPEGFTHDWEVFVRGADNTDIQYFVDKVVFHLHETFPK 60

Query: 61 PKRILKEPPYVVKESGYAGFTLPIEVY 87
          P+R++KE PY+VKESGYAGF LPI+VY
Sbjct: 61 PRRVIKESPYIVKESGYAGFVLPIDVY 87

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357630519|gb|EHJ78578.1| hypothetical protein KGM_00180 [Danaus plexippus]

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 89/115 (77%), Gaps = 2/115 (1%)

Query: 3   YSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPK 62
            +N+K+  EIGHEAS+++K+TPEGFTHDWEVFVRG + ADI +F++KVVF+LHETFPKPK
Sbjct: 1   MTNIKVNFEIGHEASLKSKKTPEGFTHDWEVFVRGQEGADISHFVEKVVFYLHETFPKPK 60

Query: 63  RILKEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEGFTHDWEVF 115
           R++KEPP+ +KESGYAGF  PIE+Y      PK  + TY + ++  GF  D  VF
Sbjct: 61  RVVKEPPFSIKESGYAGFVFPIEIYLKSKDEPKKIQFTYDLTLQQCGFLKDRYVF 115

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270000916|gb|EEZ97363.1| hypothetical protein TcasGA2_TC011185 [Tribolium castaneum]

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 73/82 (89%)

Query: 6  VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
          V+I +EIGHEAS+R K+T EGFTHDWEVFVRG D A+IH +I+KVVF+LHETFPKPKR++
Sbjct: 3  VRICIEIGHEASLRTKKTQEGFTHDWEVFVRGCDGAEIHYYIEKVVFYLHETFPKPKRVV 62

Query: 66 KEPPYVVKESGYAGFTLPIEVY 87
          KEPPY VKESGYAGF  PI++Y
Sbjct: 63 KEPPYSVKESGYAGFNFPIDIY 84

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189241557|ref|XP_966967.2| PREDICTED: similar to GA21032-PA [Tribolium castaneum]

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 66/96 (68%), Positives = 79/96 (82%), Gaps = 1/96 (1%)

Query: 6   VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
           V+I +EIGHEAS+R K+T EGFTHDWEVFVRG D A+IH +I+KVVF+LHETFPKPKR++
Sbjct: 659 VRICIEIGHEASLRTKKTQEGFTHDWEVFVRGCDGAEIHYYIEKVVFYLHETFPKPKRVV 718

Query: 66  KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY 100
           KEPPY VKESGYAGF  PI++Y  +   PK  R TY
Sbjct: 719 KEPPYSVKESGYAGFNFPIDIYLRNNNEPKKIRFTY 754

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967231|ref|XP_320904.4| AGAP002132-PA [Anopheles gambiae str. PEST] gi|333469701|gb|EAA00936.5| AGAP002132-PA [Anopheles gambiae str. PEST]

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 15/116 (12%)

Query: 5   NVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRI 64
           +VKI+ EIGH ASV+++ T EG+THDWE+FVRG+D  DI +F+DKVVF+LHE+FPKPKR+
Sbjct: 2   SVKISFEIGHVASVKSRPTAEGYTHDWELFVRGLDGTDISHFVDKVVFNLHESFPKPKRV 61

Query: 65  LKEPPYVVKESGYAGFTLPIEVYG---------------DLIVPKSKRTTYIFIKP 105
            KEPPY+VKE+GYAGF LP+E+Y                DL   K++R  Y+F  P
Sbjct: 62  FKEPPYLVKEAGYAGFILPVEIYFKNRDDPKKTVYNYDLDLTPAKNQREDYVFHSP 117

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019258|gb|EGI59767.1| Protein ENL [Acromyrmex echinatior]

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 73/82 (89%)

Query: 6  VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
          V+ITLE GH + +R + TPEG+THDWEVFVRGVDNADIH++I+KVVF LH+TF  PKR+L
Sbjct: 3  VRITLECGHTSMLRMRSTPEGYTHDWEVFVRGVDNADIHHYIEKVVFLLHDTFRNPKRVL 62

Query: 66 KEPPYVVKESGYAGFTLPIEVY 87
          KEPP+VVKESGYAGF +PIE+Y
Sbjct: 63 KEPPFVVKESGYAGFIIPIEIY 84

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196972|gb|EFN78347.1| Protein ENL [Harpegnathos saltator]

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 72/82 (87%)

Query: 6  VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
          ++ITLE GH + VR+  TPEG+THDWEVFVRGVDNADIH +IDKVVF LH++F  PKR+L
Sbjct: 3  IRITLEYGHASMVRSHLTPEGYTHDWEVFVRGVDNADIHQYIDKVVFLLHDSFRNPKRVL 62

Query: 66 KEPPYVVKESGYAGFTLPIEVY 87
          KEPP+VVKESGYAGF +PIE+Y
Sbjct: 63 KEPPFVVKESGYAGFLIPIEIY 84

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779244|ref|XP_001119975.2| PREDICTED: hypothetical protein LOC724205 [Apis mellifera]

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 73/82 (89%)

Query: 6  VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
          ++ITLE GH + +R + TP+G+THDWEVFVRG+DNADIH++++KVVF LHETF KPKRI+
Sbjct: 3  IRITLECGHASMLRMRTTPQGYTHDWEVFVRGIDNADIHHYVEKVVFQLHETFAKPKRII 62

Query: 66 KEPPYVVKESGYAGFTLPIEVY 87
          KEPP+V+KESGYAGF +PI +Y
Sbjct: 63 KEPPFVIKESGYAGFEIPIHIY 84

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723812|ref|XP_003400282.1| PREDICTED: hypothetical protein LOC100645808 [Bombus terrestris]

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 55/82 (67%), Positives = 73/82 (89%)

Query: 6  VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
          ++ITLE GH + +R + TP+G+THDWE+FVRG+DNADIH++++KVVF LH+TF KPKRIL
Sbjct: 3  IRITLECGHSSMLRMRTTPQGYTHDWELFVRGIDNADIHHYVEKVVFQLHQTFSKPKRIL 62

Query: 66 KEPPYVVKESGYAGFTLPIEVY 87
          KEPP+V+KESGYAGF +PI +Y
Sbjct: 63 KEPPFVLKESGYAGFEIPIHIY 84

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
MGI|MGI:1917372	569	Mllt3 "myeloid/lymphoid or mix	0.507	0.179	0.596	4.5e-31
UNIPROTKB|F1MNI7	567	MLLT3 "Uncharacterized protein	0.507	0.179	0.596	9e-31
UNIPROTKB|F1P9L9	568	MLLT3 "Uncharacterized protein	0.507	0.179	0.596	9.2e-31
UNIPROTKB|F1NLL5	554	MLLT1 "Uncharacterized protein	0.507	0.184	0.596	1e-30
UNIPROTKB|F1SBT9	556	MLLT1 "Uncharacterized protein	0.507	0.183	0.576	1.5e-30
UNIPROTKB|B7Z755	565	MLLT3 "Protein AF-9" [Homo sap	0.507	0.180	0.586	1.9e-30
UNIPROTKB|P42568	568	MLLT3 "Protein AF-9" [Homo sap	0.507	0.179	0.586	2e-30
UNIPROTKB|F1N4L4	592	MLLT1 "Uncharacterized protein	0.507	0.172	0.567	3.4e-30
ZFIN|ZDB-GENE-081105-45	582	mllt1 "myeloid/lymphoid or mix	0.507	0.175	0.586	1.6e-29
UNIPROTKB|Q03111	559	MLLT1 "Protein ENL" [Homo sapi	0.507	0.182	0.557	1.7e-29

MGI|MGI:1917372 Mllt3 "myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3" [Mus musculus (taxid:10090)]

 Score = 328 (120.5 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP+PKR+ 
Sbjct:     7 VQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             K+PPY V+ESGYAGF LPIEVY  +   PK  R  Y +F+  EG
Sbjct:    67 KDPPYKVEESGYAGFILPIEVYFKNKEEPKKVRFDYDLFLHLEG 110

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007379 "segment specification" evidence=IMP

GO:0009952 "anterior/posterior pattern specification" evidence=IMP

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=ISO

GO:2000096 "positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway" evidence=ISO

UNIPROTKB|F1MNI7 MLLT3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 328 (120.5 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP+PKR+ 
Sbjct:     7 VQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             K+PPY V+ESGYAGF LPIEVY  +   PK  R  Y +F+  EG
Sbjct:    67 KDPPYKVEESGYAGFILPIEVYFKNKEEPKKVRFDYDLFLHLEG 110

GO:2000096 "positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0007379 "segment specification" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1P9L9 MLLT3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 328 (120.5 bits), Expect = 9.2e-31, Sum P(2) = 9.2e-31
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP+PKR+ 
Sbjct:     7 VQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             K+PPY V+ESGYAGF LPIEVY  +   PK  R  Y +F+  EG
Sbjct:    67 KDPPYKVEESGYAGFILPIEVYFKNKEEPKKVRFDYDLFLHLEG 110

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1NLL5 MLLT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 324 (119.1 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
 Identities = 62/104 (59%), Positives = 77/104 (74%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A +R K T EGFTHDW VFVRG +  DI +F++KVVF LHE+FPKPKR+ 
Sbjct:     7 VQVKLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFRLHESFPKPKRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             KEPPY V+ESGYAGF +PIEVY  +   PK    TY +F+  EG
Sbjct:    67 KEPPYKVEESGYAGFIMPIEVYFRNKEEPKKVCFTYDLFLNLEG 110

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

UNIPROTKB|F1SBT9 MLLT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 318 (117.0 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
 Identities = 60/104 (57%), Positives = 77/104 (74%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A +R K T EGFTHDW VFVRG +  DI +F++KVVF LH++FPKPKR+ 
Sbjct:     7 VQVKLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFRLHDSFPKPKRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             KEPPY V+ESGYAGF +PIEVY  +   P+    TY +F+  EG
Sbjct:    67 KEPPYKVEESGYAGFIMPIEVYFKNKEEPRKVCFTYDLFLNLEG 110

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|B7Z755 MLLT3 "Protein AF-9" [Homo sapiens (taxid:9606)]

 Score = 325 (119.5 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
 Identities = 61/104 (58%), Positives = 80/104 (76%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP+PKR+ 
Sbjct:     4 VQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVC 63

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             K+PPY V+ESGYAGF LPIEVY  +   P+  R  Y +F+  EG
Sbjct:    64 KDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLFLHLEG 107

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|P42568 MLLT3 "Protein AF-9" [Homo sapiens (taxid:9606)]

 Score = 325 (119.5 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
 Identities = 61/104 (58%), Positives = 80/104 (76%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP+PKR+ 
Sbjct:     7 VQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             K+PPY V+ESGYAGF LPIEVY  +   P+  R  Y +F+  EG
Sbjct:    67 KDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLFLHLEG 110

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007379 "segment specification" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IGI;IDA

GO:2000096 "positive regulation of Wnt receptor signaling pathway, planar cell polarity pathway" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1N4L4 MLLT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 314 (115.6 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
 Identities = 59/104 (56%), Positives = 77/104 (74%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A +R K T EGFTHDW VFVRG +  +I +F++KVVF LH++FPKPKR+ 
Sbjct:    43 VQVKLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCEIQHFVEKVVFRLHDSFPKPKRVC 102

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             KEPPY V+ESGYAGF +PIEVY  +   P+    TY +F+  EG
Sbjct:   103 KEPPYKVEESGYAGFIMPIEVYFKNKEEPRKVCFTYDLFLNLEG 146

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

ZFIN|ZDB-GENE-081105-45 mllt1 "myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1" [Danio rerio (taxid:7955)]

 Score = 315 (115.9 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
 Identities = 61/104 (58%), Positives = 76/104 (73%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A +R K T EGFTHDW VFVRG + +DI +F+DKVVF LHE+FPKPKR+ 
Sbjct:     7 VQVKLELGHRAQLRKKVTSEGFTHDWMVFVRGPEGSDIQHFVDKVVFRLHESFPKPKRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
             KEP Y V+ESGYAGF +PIEVY  +   PK     Y +F+  EG
Sbjct:    67 KEPQYKVEESGYAGFLMPIEVYFKNKEEPKKVCFNYDLFLNLEG 110

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q03111 MLLT1 "Protein ENL" [Homo sapiens (taxid:9606)]

 Score = 309 (113.8 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
 Identities = 58/104 (55%), Positives = 77/104 (74%)

Query:     6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
             V++ LE+GH A +R K T EGFTHDW VFVRG +  DI +F++KVVF LH++FPKP+R+ 
Sbjct:     7 VQVRLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVC 66

Query:    66 KEPPYVVKESGYAGFTLPIEV-YGDLIVPKSKRTTY-IFIKPEG 107
             KEPPY V+ESGYAGF +PIEV + +   P+    TY +F+  EG
Sbjct:    67 KEPPYKVEESGYAGFIMPIEVHFKNKEEPRKVCFTYDLFLNLEG 110

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0003677 "DNA binding" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P42568	AF9_HUMAN	No assigned EC number	0.6590	0.4328	0.1531	yes	N/A
A2AM29	AF9_MOUSE	No assigned EC number	0.5909	0.5323	0.1880	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	201
pfam03366	84	pfam03366, YEATS, YEATS family	2e-26
pfam03366	84	pfam03366, YEATS, YEATS family	4e-24
COG5033	225	COG5033, TFG3, Transcription initiation factor IIF	2e-17
COG5033	225	COG5033, TFG3, Transcription initiation factor IIF	3e-17

>gnl|CDD|190614 pfam03366, YEATS, YEATS family

 Score = 96.5 bits (241), Expect = 2e-26
 Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)

Query: 109 THDWEVFVRGVDNA-DIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEV 167
           TH W VFVRG+DN  D+  FI KV F LHE+FP P R + +PP+ V E+G+  F +PI++
Sbjct: 1   THKWTVFVRGLDNEGDLSYFIKKVTFKLHESFPNPVRTVTKPPFEVTETGWGEFEIPIKI 60

Query: 168 YLKNNNEPR 176
           Y  ++NE  
Sbjct: 61  YFVDSNEKP 69

We have named this family the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit'. This family also contains the GAS41 protein. All these proteins are thought to have a transcription stimulatory activity. Length = 84

>gnl|CDD|190614 pfam03366, YEATS, YEATS family

 Score = 90.3 bits (225), Expect = 4e-24
 Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 28 THDWEVFVRGVDNA-DIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEV 86
          TH W VFVRG+DN  D+  FI KV F LHE+FP P R + +PP+ V E+G+  F +PI++
Sbjct: 1  THKWTVFVRGLDNEGDLSYFIKKVTFKLHESFPNPVRTVTKPPFEVTETGWGEFEIPIKI 60

Query: 87 Y 87
          Y
Sbjct: 61 Y 61

We have named this family the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit'. This family also contains the GAS41 protein. All these proteins are thought to have a transcription stimulatory activity. Length = 84

>gnl|CDD|227366 COG5033, TFG3, Transcription initiation factor IIF, auxiliary subunit [Transcription]

 Score = 76.8 bits (189), Expect = 2e-17
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 12 IGHEASVRN--KRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPP 69
          I  EA      +R P   TH W VFVR     DI   + KV+F LH TF  P R ++ PP
Sbjct: 17 IPGEAKPLGNEERFPVRHTHIWLVFVRAPGKEDIATIVKKVIFKLHPTFSNPTRTIESPP 76

Query: 70 YVVKESGYAGFTLPIEVY 87
          + +KE+G+  F + I+++
Sbjct: 77 FEIKETGWGEFDIQIKIF 94

Length = 225

>gnl|CDD|227366 COG5033, TFG3, Transcription initiation factor IIF, auxiliary subunit [Transcription]

 Score = 76.4 bits (188), Expect = 3e-17
 Identities = 26/75 (34%), Positives = 39/75 (52%)

Query: 109 THDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 168
           TH W VFVR     DI   + KV+F LH TF  P R ++ PP+ +KE+G+  F + I+++
Sbjct: 35  THIWLVFVRAPGKEDIATIVKKVIFKLHPTFSNPTRTIESPPFEIKETGWGEFDIQIKIF 94

Query: 169 LKNNNEPRKIRRKHT 183
                  + I     
Sbjct: 95  FAEKAGEKTIHFYLH 109

Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	201
PF03366	84	YEATS: YEATS family; InterPro: IPR005033 Named the	99.97
KOG3149|consensus	249		99.96
PF03366	84	YEATS: YEATS family; InterPro: IPR005033 Named the	99.95
COG5033	225	TFG3 Transcription initiation factor IIF, auxiliar	99.93
KOG3149|consensus	249		99.88
COG5033	225	TFG3 Transcription initiation factor IIF, auxiliar	99.88

>PF03366 YEATS: YEATS family; InterPro: IPR005033 Named the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit', this family also contains the GAS41 protein

Probab=99.97  E-value=5.7e-32  Score=199.26  Aligned_cols=81  Identities=38%  Similarity=0.699  Sum_probs=67.9

Q ss_pred             eeeEEEEEEcCCCCCcccceeeEEEEECCCCCCCeEEeeCCCEEEeeceeeeeEcEEEEEEccCCCCCceeEEEeecCCC
Q psy5937          28 THDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEG  107 (201)
Q Consensus        28 th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~p~r~v~~pPF~v~e~GwGeF~i~i~i~f~~~~~k~~r~i~h~L~~~~  107 (201)
                      ||+|+||||+.+++|++.+|+||+|+|||||+||+|++++|||+|+|.|||||+|.|+|+|++.+..++.++.|.|+++.
T Consensus         1 th~W~v~Vr~~~~~d~~~~i~kV~f~LHpsF~~p~r~v~~pPFevte~GWGeF~i~I~i~f~~~~~~~~~~~~h~L~l~~   80 (84)
T PF03366_consen    1 THKWTVYVRGLDNEDLSYFIKKVTFKLHPSFPNPVRVVTKPPFEVTETGWGEFEIPIKIHFKDPSNEKPVTIQHDLKLHQ   80 (84)
T ss_dssp             -EEEEEEEEECCCT--TTTEEEEEEES-TTSSS-EEECSSTTEEEEEEESS--EEEEEEECCCGGCTCEEEEEEE--SSS
T ss_pred             CcEEEEEEEeCCCCCccceEEEEEEECCCCCCCCceEecCCCCEEEEeEeccEEEEEEEEEeCCCCCCcEEEEEEEEcCC
Confidence            79999999999999999999999999999999999999999999999999999999999999976678899999999854


Q ss_pred             C
Q psy5937         108 F  108 (201)
Q Consensus       108 ~  108 (201)
                      .
T Consensus        81 ~   81 (84)
T PF03366_consen   81 D   81 (84)
T ss_dssp             C
T ss_pred             C
Confidence            3

All these proteins are thought to have a transcription stimulatory activity.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3QRL_A 2L7E_A 3FK3_C 3RLS_A.

>KOG3149|consensus

Probab=99.96  E-value=1.8e-29  Score=218.67  Aligned_cols=106  Identities=39%  Similarity=0.774  Sum_probs=100.0

Q ss_pred             eeEEEEEEEEceeEEecCCCCCCCCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCCCeEEeeCCCEEEeeceeeeeEc
Q psy5937           3 YSNVKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTL   82 (201)
Q Consensus         3 ~~~v~~~i~iG~~~~~~~~~~~~~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~p~r~v~~pPF~v~e~GwGeF~i   82 (201)
                      .+++.+.|++||+|.+++++.++++||.|+||||+.+++|++.||+||+|+||+||+||+|++++|||+|+|+|||+|+|
T Consensus        11 ~~~~~~~iv~G~~a~~~~~~~~~~~th~w~v~v~~~~~ed~~~~V~KV~f~LH~sf~~P~Rvv~~pPf~i~EtGwgeF~i   90 (249)
T KOG3149|consen   11 ECTISVPIVPGNRAAILGKRLPDGFTHIWEVYVRGPGKEDISAFVDKVVFKLHESFPNPRRVVESPPFEITETGWGEFEI   90 (249)
T ss_pred             eeeEEeeeecCccccccCCCCCcccceeeEEEecCcCccccceeeeeeeeecccccccccccccCCCceEEeeccccceE
Confidence            47799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEccCCCCCceeEEEeecCCCC
Q psy5937          83 PIEVYGDLIVPKSKRTTYIFIKPEGF  108 (201)
Q Consensus        83 ~i~i~f~~~~~k~~r~i~h~L~~~~~  108 (201)
                      .|+|+|.+..+++++.++|.|++...
T Consensus        91 ~i~i~f~d~~~~~~v~~~~~l~l~~~  116 (249)
T KOG3149|consen   91 QIEIFFTDDANEKKVTLYHDLKLHSY  116 (249)
T ss_pred             EEEEEeccCCCCceeeeeeeEEeecc
Confidence            99999999988889999998886433

>PF03366 YEATS: YEATS family; InterPro: IPR005033 Named the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit', this family also contains the GAS41 protein

Probab=99.95  E-value=1.6e-28  Score=180.84  Aligned_cols=74  Identities=43%  Similarity=0.951  Sum_probs=61.2

Q ss_pred             cccceEEEeccCCccccceeeeEEEEeccccCCCcccccCCCeEEeecCCCceEEeEEEEEccC--CcCeEEEecc
Q psy5937         109 THDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNN--NEPRKIRRKH  182 (201)
Q Consensus       109 tH~W~~~V~~~~~~~vs~fidkVvF~LH~tF~~p~r~~~~pPf~v~e~GWGeF~i~I~i~f~~~--~~~~~i~~~~  182 (201)
                      +|+|++||++++++++++++++|+|+|||||+||+|++++|||+|+|+|||||+|+|+|+|++.  .++.+|.++.
T Consensus         1 th~W~v~Vr~~~~~d~~~~i~kV~f~LHpsF~~p~r~v~~pPFevte~GWGeF~i~I~i~f~~~~~~~~~~~~h~L   76 (84)
T PF03366_consen    1 THKWTVYVRGLDNEDLSYFIKKVTFKLHPSFPNPVRVVTKPPFEVTETGWGEFEIPIKIHFKDPSNEKPVTIQHDL   76 (84)
T ss_dssp             -EEEEEEEEECCCT--TTTEEEEEEES-TTSSS-EEECSSTTEEEEEEESS--EEEEEEECCCGGCTCEEEEEEE-
T ss_pred             CcEEEEEEEeCCCCCccceEEEEEEECCCCCCCCceEecCCCCEEEEeEeccEEEEEEEEEeCCCCCCcEEEEEEE
Confidence            6999999999999999999999999999999999999999999999999999999999999995  4555665553

All these proteins are thought to have a transcription stimulatory activity.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3QRL_A 2L7E_A 3FK3_C 3RLS_A.

>COG5033 TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription]

Probab=99.93  E-value=1.1e-26  Score=195.07  Aligned_cols=100  Identities=31%  Similarity=0.574  Sum_probs=88.1

Q ss_pred             EEEceeEEecCCC--CCCCCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCCCeEEeeCCCEEEeeceeeeeEcEEEEE
Q psy5937          10 LEIGHEASVRNKR--TPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY   87 (201)
Q Consensus        10 i~iG~~~~~~~~~--~~~~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~p~r~v~~pPF~v~e~GwGeF~i~i~i~   87 (201)
                      .+|+++|..+...  .+-.++|-|.+|||++.+|+++.||+||+|+|||||+||+|++.+|||+|.|+|||||+|.|+|+
T Consensus        15 ~Iipgea~~~~~e~~~P~r~th~w~v~v~~~g~E~~~~iv~KVifkLH~Tf~NP~Rti~~pPFeI~EtGWGEF~i~I~if   94 (225)
T COG5033          15 VIIPGEAKPLGNEERFPVRHTHIWLVFVRAPGKEDIATIVKKVIFKLHPTFSNPTRTIESPPFEIKETGWGEFDIQIKIF   94 (225)
T ss_pred             eeccCccccCCccccCCchhhEEEEEEEeCCCCcchhhhhheeeEEeccccCCCcccccCCCcEEEecccccceEEEEEE
Confidence            3444488887543  56678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EccCCCCCceeEEEeecCCCCc
Q psy5937          88 GDLIVPKSKRTTYIFIKPEGFT  109 (201)
Q Consensus        88 f~~~~~k~~r~i~h~L~~~~~t  109 (201)
                      |.++.++.....||.+.++.+.
T Consensus        95 f~~~age~~~~fyl~f~~~~Y~  116 (225)
T COG5033          95 FAEKAGEKTIHFYLHFGDEPYA  116 (225)
T ss_pred             EecCCCceEeehhhhccccccc
Confidence            9999888888888877766554

>KOG3149|consensus

Probab=99.88  E-value=8.2e-23  Score=177.13  Aligned_cols=92  Identities=42%  Similarity=0.931  Sum_probs=83.6

Q ss_pred             CCCCcccceEEEeccCCccccceeeeEEEEeccccCCCcccccCCCeEEeecCCCceEEeEEEEEccCCcCeEEEecc--
Q psy5937         105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKH--  182 (201)
Q Consensus       105 ~~~~tH~W~~~V~~~~~~~vs~fidkVvF~LH~tF~~p~r~~~~pPf~v~e~GWGeF~i~I~i~f~~~~~~~~i~~~~--  182 (201)
                      +..++|.|++|+++..+++++.|+++|+|+||+||++|+|++.+|||+++|+|||||+|+|+|+|.++.+++++.+.|  
T Consensus        32 ~~~~th~w~v~v~~~~~ed~~~~V~KV~f~LH~sf~~P~Rvv~~pPf~i~EtGwgeF~i~i~i~f~d~~~~~~v~~~~~l  111 (249)
T KOG3149|consen   32 PDGFTHIWEVYVRGPGKEDISAFVDKVVFKLHESFPNPRRVVESPPFEITETGWGEFEIQIEIFFTDDANEKKVTLYHDL  111 (249)
T ss_pred             CcccceeeEEEecCcCccccceeeeeeeeecccccccccccccCCCceEEeeccccceEEEEEEeccCCCCceeeeeeeE
Confidence            477899999999999999999999999999999999999999999999999999999999999999999988888764  


Q ss_pred             -----CCCCCcccccccce
Q psy5937         183 -----TTPPSRHLSSRDLR  196 (201)
Q Consensus       183 -----~~~~~~~~~~~~~~  196 (201)
                           +.|+++|+.|.+.+
T Consensus       112 ~l~~~~~p~~~~~~~~~~~  130 (249)
T KOG3149|consen  112 KLHSYGAPPVPHEESTKKT  130 (249)
T ss_pred             EeeccCCCCccchhhhccc
Confidence                 34578888776643

>COG5033 TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription]

Probab=99.88  E-value=7.8e-23  Score=171.87  Aligned_cols=76  Identities=34%  Similarity=0.722  Sum_probs=73.0

Q ss_pred             CCcccceEEEeccCCccccceeeeEEEEeccccCCCcccccCCCeEEeecCCCceEEeEEEEEccCCcCeEEEecc
Q psy5937         107 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKH  182 (201)
Q Consensus       107 ~~tH~W~~~V~~~~~~~vs~fidkVvF~LH~tF~~p~r~~~~pPf~v~e~GWGeF~i~I~i~f~~~~~~~~i~~~~  182 (201)
                      ..+|-|.++|++..++++++|++||+|+|||||+||+|.+.+|||+|.|+|||||+|.|+|||.++.++++|.+++
T Consensus        33 r~th~w~v~v~~~g~E~~~~iv~KVifkLH~Tf~NP~Rti~~pPFeI~EtGWGEF~i~I~iff~~~age~~~~fyl  108 (225)
T COG5033          33 RHTHIWLVFVRAPGKEDIATIVKKVIFKLHPTFSNPTRTIESPPFEIKETGWGEFDIQIKIFFAEKAGEKTIHFYL  108 (225)
T ss_pred             hhhEEEEEEEeCCCCcchhhhhheeeEEeccccCCCcccccCCCcEEEecccccceEEEEEEEecCCCceEeehhh
Confidence            4578999999999999999999999999999999999999999999999999999999999999999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	201
3rls_A	175	Crystal Structure Of Yeast Af-9 Homolog Protein Yaf		1e-12
3rls_A	175	Crystal Structure Of Yeast Af-9 Homolog Protein Yaf		5e-12
3fk3_A	164	Structure Of The Yeats Domain, Yaf9 Length = 164		1e-12
3fk3_A	164	Structure Of The Yeats Domain, Yaf9 Length = 164		5e-12
3qrl_A	140	Crystal Structure Of The Taf14 Yeats Domain Length		2e-07
2l7e_A	131	The Structure Of A Domain From Yeast Length = 131		3e-07

>pdb|3RLS|A Chain A, Crystal Structure Of Yeast Af-9 Homolog Protein Yaf9 Length = 175

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 16 ASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKES 75
           SV+    P   TH W +FVRG  N DI  FI KVVF LH+T+P P R ++ PP+ + E+
Sbjct: 20 GSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTET 79
Query: 76 GYAGFTLPIEVY 87
          G+  F + I+VY
Sbjct: 80 GWGEFDINIKVY 91

>pdb|3RLS|A Chain A, Crystal Structure Of Yeast Af-9 Homolog Protein Yaf9 Length = 175

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
           P   TH W +FVRG  N DI  FI KVVF LH+T+P P R ++ PP+ + E+G+  F + 
Sbjct: 28  PAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDIN 87
Query: 165 IEVYL 169
           I+VY 
Sbjct: 88  IKVYF 92

>pdb|3FK3|A Chain A, Structure Of The Yeats Domain, Yaf9 Length = 164

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 16 ASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKES 75
           SV+    P   TH W +FVRG  N DI  FI KVVF LH+T+P P R ++ PP+ + E+
Sbjct: 23 GSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTET 82
Query: 76 GYAGFTLPIEVY 87
          G+  F + I+VY
Sbjct: 83 GWGEFDINIKVY 94

>pdb|3FK3|A Chain A, Structure Of The Yeats Domain, Yaf9 Length = 164

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
           P   TH W +FVRG  N DI  FI KVVF LH+T+P P R ++ PP+ + E+G+  F + 
Sbjct: 31  PAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDIN 90
Query: 165 IEVYL 169
           I+VY 
Sbjct: 91  IKVYF 95

>pdb|3QRL|A Chain A, Crystal Structure Of The Taf14 Yeats Domain Length = 140

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 129 DKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKI 178
           DKV++HLH TF  P R   +PP+ ++E G+ GF L I V+L      RKI
Sbjct: 55  DKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKI 104

>pdb|2L7E|A Chain A, The Structure Of A Domain From Yeast Length = 131

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 129 DKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKI 178
           DKV++HLH TF  P R   +PP+ ++E G+ GF L I V+L      RKI
Sbjct: 52  DKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKI 101

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	201
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	6e-24
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	1e-23
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	2e-23
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	2e-23

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A Length = 140

 Score = 91.2 bits (226), Expect = 6e-24
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 105 PEGFTHDWEVFVRGVDNA---DIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGF 161
                  W + +  +D+          DKV++HLH TF  P R   +PP+ ++E G+ GF
Sbjct: 28  ENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGF 87

Query: 162 TLPIEVYLKNNNEPRKIRRKHTTPPSRH 189
            L I V+L      RKI          +
Sbjct: 88  PLDISVFLLEKAGERKIPHDLNFLQESY 115

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A Length = 140

 Score = 90.4 bits (224), Expect = 1e-23
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 4  SNVKITLEIGHEASV--RNKRTPEGFTHDWEVFVRGVDNA---DIHNFIDKVVFHLHETF 58
          + VK T+ I  +  +              W + +  +D+          DKV++HLH TF
Sbjct: 6  ATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTF 65

Query: 59 PKPKRILKEPPYVVKESGYAGFTLPIEVY 87
            P R   +PP+ ++E G+ GF L I V+
Sbjct: 66 ANPNRTFTDPPFRIEEQGWGGFPLDISVF 94

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A Length = 175

 Score = 91.4 bits (226), Expect = 2e-23
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 6  VKITLEIGHEASV----RNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKP 61
          V   +  G+ A      +    P   TH W +FVRG  N DI  FI KVVF LH+T+P P
Sbjct: 6  VSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNP 65

Query: 62 KRILKEPPYVVKESGYAGFTLPIEVY 87
           R ++ PP+ + E+G+  F + I+VY
Sbjct: 66 VRSIEAPPFELTETGWGEFDINIKVY 91

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A Length = 175

 Score = 91.0 bits (225), Expect = 2e-23
 Identities = 32/78 (41%), Positives = 45/78 (57%)

Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
           P   TH W +FVRG  N DI  FI KVVF LH+T+P P R ++ PP+ + E+G+  F + 
Sbjct: 28  PAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDIN 87

Query: 165 IEVYLKNNNEPRKIRRKH 182
           I+VY       + +   H
Sbjct: 88  IKVYFVEEANEKVLNFYH 105

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	201
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	100.0
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	99.98
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	99.93
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	99.93

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A

Probab=100.00  E-value=1.4e-37  Score=254.71  Aligned_cols=137  Identities=29%  Similarity=0.509  Sum_probs=112.5

Q ss_pred             eEEEEEEEEceeEEecCC----CCCCCCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCCCeEEeeCCCEEEeeceeee
Q psy5937           4 SNVKITLEIGHEASVRNK----RTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAG   79 (201)
Q Consensus         4 ~~v~~~i~iG~~~~~~~~----~~~~~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~p~r~v~~pPF~v~e~GwGe   79 (201)
                      .+|.++|+|||+|.++++    ..++++||+|+||||+++|+|+++||+||+|+|||||+||+|++++|||+|+|+||||
T Consensus         4 v~i~kpIv~Gn~a~~l~~~~~~~~~~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~np~Rvv~~PPFevtE~GWGe   83 (175)
T 3rls_A            4 LSVSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGE   83 (175)
T ss_dssp             CCEEEEEEEEEEEEECCSCCCTTCCTTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSSCEEEECSSSEEEEEEESSC
T ss_pred             eEEEeCEEEcceeEECCccccCCCCCCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCCCcEEEeCCCCEEEEeEEee
Confidence            468999999999999864    2567899999999999999999999999999999999999999999999999999999


Q ss_pred             eEcEEEEEEccCCCCCceeEEEeecCCCCccc-----ceEE-----EeccCCccccceeeeEEEEeccccCCCcccc
Q psy5937          80 FTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHD-----WEVF-----VRGVDNADIHNFIDKVVFHLHETFPKPKRIL  146 (201)
Q Consensus        80 F~i~i~i~f~~~~~k~~r~i~h~L~~~~~tH~-----W~~~-----V~~~~~~~vs~fidkVvF~LH~tF~~p~r~~  146 (201)
                      |+|.|+|+|++..++++.+++|.|++......     -...     +...+++.++++||+++|      .+|+..+
T Consensus        84 F~i~I~i~F~~~~~ek~i~i~H~L~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~se~ydEivF------~ePte~f  154 (175)
T 3rls_A           84 FDINIKVYFVEEANEKVLNFYHRLRLHPYANPVPNSDNGNEQNTTDHNSKDAEVSSVYFDEIVF------NEPNEEF  154 (175)
T ss_dssp             CEEEEEEEECGGGCCCCEEEEEECCCCC-----------------------CCEEEEEEEEEEE------SSCCHHH
T ss_pred             EEEEEEEEEeCCCCCccEEEEEEEEecCCCCccccccccccccccccccCCCceEEEEeccEEE------eCCCHHH
Confidence            99999999999878889999999998544311     0000     111245677999999999      6666433

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A

Probab=99.98  E-value=1e-32  Score=218.54  Aligned_cols=128  Identities=27%  Similarity=0.482  Sum_probs=106.7

Q ss_pred             EEEEEEEEceeEEecCCCC-CCCCe-eeEE--EEEEcCCCCCcc-cceeeEEEEECCCCCCCeEEeeCCCEEEeeceeee
Q psy5937           5 NVKITLEIGHEASVRNKRT-PEGFT-HDWE--VFVRGVDNADIH-NFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAG   79 (201)
Q Consensus         5 ~v~~~i~iG~~~~~~~~~~-~~~~t-h~W~--v~vr~~~~~~~~-~~v~kV~f~LH~sf~~p~r~v~~pPF~v~e~GwGe   79 (201)
                      .++++|+|-+++.++++++ .+|++ |+|+  |||||++|+|++ +||+||+|+|||||+||+|++++|||+|+|+||||
T Consensus         7 ~vkrtvr~~T~Q~~~~~~~~~eg~~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~np~r~v~~pPF~v~e~GWGe   86 (140)
T 3qrl_A            7 TVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGG   86 (140)
T ss_dssp             EEEEEEEEEEEEEECTTSCCBTTBCCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSSCEEEECSTTCCEEEEESSC
T ss_pred             ceEEEEEEEEeeeeCCCCCCCCCCcccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCCCeEEEcCCCcEEEEEEeee
Confidence            6899999999999887765 77887 9998  999999999997 89999999999999999999999999999999999


Q ss_pred             eEcEEEEEEccCCCCCceeEEEeecCCCCcccceEEEeccCCccccceeeeEEEEeccccCCCcccccCCCeEEeecCC
Q psy5937          80 FTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGY  158 (201)
Q Consensus        80 F~i~i~i~f~~~~~k~~r~i~h~L~~~~~tH~W~~~V~~~~~~~vs~fidkVvF~LH~tF~~p~r~~~~pPf~v~e~GW  158 (201)
                      |+|.|+|+|+++.  +++++.|.|+++...  .             +...+++      |+||+..+.+   .|.++|.
T Consensus        87 F~i~I~i~f~~~~--~~~~i~H~L~f~~~~--y-------------~~~h~i~------f~np~~~l~~---~L~~~Gp  139 (140)
T 3qrl_A           87 FPLDISVFLLEKA--GERKIPHDLNFLQES--Y-------------EVEHVIQ------IPLNKPLLTE---ELAKSGS  139 (140)
T ss_dssp             CCEEEEEEEGGGT--EEEEEEECCCSSSSE--E-------------EEEEEEE------EESCSHHHHH---HHTTTSC
T ss_pred             EEEEEEEEEecCC--CcEEEEEEEEeCCCC--C-------------cceEEEE------ECCCCHHHHH---HHHHhCC
Confidence            9999999999874  367889998875332  1             1112334      4888877776   6666663

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A

Probab=99.93  E-value=1.9e-26  Score=182.61  Aligned_cols=77  Identities=35%  Similarity=0.781  Sum_probs=72.5

Q ss_pred             CCCc-ccce--EEEeccCCccc-cceeeeEEEEeccccCCCcccccCCCeEEeecCCCceEEeEEEEEccCCcCeEEEec
Q psy5937         106 EGFT-HDWE--VFVRGVDNADI-HNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRK  181 (201)
Q Consensus       106 ~~~t-H~W~--~~V~~~~~~~v-s~fidkVvF~LH~tF~~p~r~~~~pPf~v~e~GWGeF~i~I~i~f~~~~~~~~i~~~  181 (201)
                      ++++ |+|+  +||++.+++++ ++|++||+|+|||||+||+|++++|||+|+|+|||||+|+|+|+|++++++++|.++
T Consensus        28 eg~~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~np~r~v~~pPF~v~e~GWGeF~i~I~i~f~~~~~~~~i~H~  107 (140)
T 3qrl_A           28 ENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHD  107 (140)
T ss_dssp             TTBCCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSSCEEEECSTTCCEEEEESSCCCEEEEEEEGGGTEEEEEEEC
T ss_pred             CCCcccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCCCeEEEcCCCcEEEEEEeeeEEEEEEEEEecCCCcEEEEEE
Confidence            5677 9999  89999999988 589999999999999999999999999999999999999999999999899999987


Q ss_pred             c
Q psy5937         182 H  182 (201)
Q Consensus       182 ~  182 (201)
                      .
T Consensus       108 L  108 (140)
T 3qrl_A          108 L  108 (140)
T ss_dssp             C
T ss_pred             E
Confidence            5

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A

Probab=99.93  E-value=2.3e-26  Score=188.38  Aligned_cols=78  Identities=41%  Similarity=0.849  Sum_probs=72.5

Q ss_pred             CCCCcccceEEEeccCCccccceeeeEEEEeccccCCCcccccCCCeEEeecCCCceEEeEEEEEccCCcCeEEEecc
Q psy5937         105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKH  182 (201)
Q Consensus       105 ~~~~tH~W~~~V~~~~~~~vs~fidkVvF~LH~tF~~p~r~~~~pPf~v~e~GWGeF~i~I~i~f~~~~~~~~i~~~~  182 (201)
                      +++++|+|++||++.++++++.|+++|+|+|||||+||+|++++|||+|+|+|||||+|.|+|+|+++++++++++.|
T Consensus        28 ~~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~np~Rvv~~PPFevtE~GWGeF~i~I~i~F~~~~~ek~i~i~H  105 (175)
T 3rls_A           28 PAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYH  105 (175)
T ss_dssp             CTTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSSCEEEECSSSEEEEEEESSCCEEEEEEEECGGGCCCCEEEEE
T ss_pred             CCCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCCCcEEEeCCCCEEEEeEEeeEEEEEEEEEeCCCCCccEEEEE
Confidence            467999999999999999999999999999999999999999999999999999999999999999987777666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00