Psyllid ID: psy598


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYKQRYTPKDKVTGKPVNDGACMVSRIANRTVFLGKIKCPVFFQVDGKHLNEL
ccccHHHHHHHHHHHHHHHHHHEEEccccccEEEEEcccccHHHHHHHcEEEEccccEEEccEEcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEcccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEHccHHHHHHEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHccccccccccccccccEEcccccccccccccccccccc
MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGimpmsvwmgmkfapgghsTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSdfykqrytpkdkvtgkpvndgacmvsRIANRTVflgkikcpvffqvdgkhlnel
MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYKQRytpkdkvtgkpvndgacMVSRIANRTVFLGKIKcpvffqvdgkhlnel
MARTCWWYYfskfteffdtfffIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYKQRYTPKDKVTGKPVNDGACMVSRIANRTVFLGKIKCPVFFQVDGKHLNEL
***TCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYKQRYTPKDKVTGKPVNDGACMVSRIANRTVFLGKIKCPVFFQVDG******
MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYK**************************************************
MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYKQRYTPKDKVTGKPVNDGACMVSRIANRTVFLGKIKCPVFFQVDGKHLNEL
MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYKQRYTPKD*******************************************
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNYPKSFMVWIALHGVLFLFLFSDFYKQRYTPKDKVTGKPVNDGACMVSRIANRTVFLGKIKCPVFFQVDGKHLNEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query194 2.2.26 [Sep-21-2011]
Q1HRV8358 Elongation of very long c N/A N/A 0.757 0.410 0.755 5e-58
D4ADY9281 Elongation of very long c yes N/A 0.835 0.576 0.539 5e-43
Q9D2Y9281 Elongation of very long c yes N/A 0.855 0.590 0.508 2e-41
A0JNC4281 Elongation of very long c yes N/A 0.835 0.576 0.533 4e-41
A1L3X0281 Elongation of very long c yes N/A 0.835 0.576 0.539 1e-38
Q9EQC4312 Elongation of very long c no N/A 0.829 0.516 0.462 2e-35
Q9BW60279 Elongation of very long c no N/A 0.865 0.602 0.423 5e-35
Q9GZR5314 Elongation of very long c no N/A 0.829 0.512 0.456 2e-34
Q3S8M4314 Elongation of very long c no N/A 0.891 0.550 0.443 3e-34
Q95K73314 Elongation of very long c N/A N/A 0.891 0.550 0.443 3e-34
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 Back     alignment and function desciption
 Score =  223 bits (569), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 111/147 (75%), Positives = 129/147 (87%)

Query: 1   MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTF 60
           M   CWWYYFSKFTEFFDTFFF+MRKK +QVSTLHVIHHG MPMSVW G+KF PGGHSTF
Sbjct: 112 MVHACWWYYFSKFTEFFDTFFFVMRKKTSQVSTLHVIHHGCMPMSVWFGVKFTPGGHSTF 171

Query: 61  FALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNY 120
           F LLNTFVHI+MY YY+ TAMGP++QKY+WWKKYLT+ QMVQFVAI VH FQLLF++CNY
Sbjct: 172 FGLLNTFVHIVMYTYYLFTAMGPQFQKYLWWKKYLTSLQMVQFVAIMVHAFQLLFIDCNY 231

Query: 121 PKSFMVWIALHGVLFLFLFSDFYKQRY 147
           PK+F+ WI +H V+FLFLF++FY+  Y
Sbjct: 232 PKAFVWWIGMHAVMFLFLFNEFYQSTY 258




Could be implicated in synthesis of very long chain fatty acids.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 Back     alignment and function description
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function description
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 Back     alignment and function description
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 Back     alignment and function description
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 Back     alignment and function description
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query194
193613015 311 PREDICTED: elongation of very long chain 0.835 0.520 0.835 8e-77
91090560 333 PREDICTED: similar to elongase, putative 0.829 0.483 0.847 9e-77
242020477 315 predicted protein [Pediculus humanus cor 0.819 0.504 0.818 2e-73
350416590 326 PREDICTED: elongation of very long chain 0.845 0.503 0.773 1e-70
340722252 326 PREDICTED: elongation of very long chain 0.845 0.503 0.773 1e-70
347971779 358 AGAP004372-PA [Anopheles gambiae str. PE 0.902 0.488 0.715 1e-70
157123636 377 elongase, putative [Aedes aegypti] gi|10 0.907 0.466 0.698 2e-70
307188869 330 Elongation of very long chain fatty acid 0.845 0.496 0.747 3e-70
66526771 331 PREDICTED: elongation of very long chain 0.845 0.495 0.757 4e-70
380014347241 PREDICTED: elongation of very long chain 0.845 0.680 0.755 7e-70
>gi|193613015|ref|XP_001952817.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 1 [Acyrthosiphon pisum] gi|328701142|ref|XP_003241505.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  291 bits (746), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 137/164 (83%), Positives = 148/164 (90%), Gaps = 2/164 (1%)

Query: 1   MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTF 60
           MA+TCWWYY SKFTEFFDT FFI+RKK  QVSTLHVIHHG MPMSVWMGMKFAPGGHSTF
Sbjct: 112 MAQTCWWYYISKFTEFFDTLFFILRKKNQQVSTLHVIHHGCMPMSVWMGMKFAPGGHSTF 171

Query: 61  FALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNY 120
           FALLNTFVHI+MYFYYM++AMGP+YQKYIWWKKYLT+FQM+QFV IFVHQFQLLF ECNY
Sbjct: 172 FALLNTFVHIVMYFYYMVSAMGPKYQKYIWWKKYLTSFQMLQFVCIFVHQFQLLFRECNY 231

Query: 121 PKSFMVWIALHGVLFLFLFSDFYKQRYTPKDKVTGKPVNDGACM 164
           PKSFMVWI LHGV+FLFLFSDFYK +YT   K   +P NDGACM
Sbjct: 232 PKSFMVWIGLHGVMFLFLFSDFYKSKYTSDGK--RRPANDGACM 273




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090560|ref|XP_971544.1| PREDICTED: similar to elongase, putative [Tribolium castaneum] gi|270013348|gb|EFA09796.1| hypothetical protein TcasGA2_TC011938 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|242020477|ref|XP_002430680.1| predicted protein [Pediculus humanus corporis] gi|212515860|gb|EEB17942.1| predicted protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|350416590|ref|XP_003491006.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340722252|ref|XP_003399522.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|347971779|ref|XP_313655.5| AGAP004372-PA [Anopheles gambiae str. PEST] gi|333469025|gb|EAA44575.5| AGAP004372-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|157123636|ref|XP_001660239.1| elongase, putative [Aedes aegypti] gi|108874329|gb|EAT38554.1| AAEL009574-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|307188869|gb|EFN73422.1| Elongation of very long chain fatty acids protein AAEL008004 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|66526771|ref|XP_397228.2| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380014347|ref|XP_003691196.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query194
FB|FBgn0051523354 CG31523 [Drosophila melanogast 0.757 0.415 0.755 1.4e-62
UNIPROTKB|Q1HRV8358 AAEL008004 "Elongation of very 0.757 0.410 0.666 2.2e-57
FB|FBgn0051522365 CG31522 [Drosophila melanogast 0.757 0.402 0.653 9.6e-57
FB|FBgn0037534329 CG2781 [Drosophila melanogaste 0.773 0.455 0.615 2.1e-52
RGD|1310560281 Elovl7 "ELOVL fatty acid elong 0.835 0.576 0.478 1.1e-39
ZFIN|ZDB-GENE-030131-5485282 elovl7b "ELOVL family member 7 0.762 0.524 0.513 1.8e-39
UNIPROTKB|A1L3X0281 ELOVL7 "Elongation of very lon 0.835 0.576 0.478 9.9e-39
UNIPROTKB|D6RHD0268 ELOVL7 "Elongation of very lon 0.835 0.604 0.478 9.9e-39
UNIPROTKB|E2RFT7288 ELOVL7 "Uncharacterized protei 0.835 0.562 0.460 1.3e-38
UNIPROTKB|J9NT60281 ELOVL7 "Uncharacterized protei 0.835 0.576 0.460 1.3e-38
FB|FBgn0051523 CG31523 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 111/147 (75%), Positives = 120/147 (81%)

Query:     1 MARTCWWYYXXXXXXXXXXXXXIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTF 60
             M   CWWYY             I+RKK   VSTLHVIHHG MP SVWMG+KFAPGGHSTF
Sbjct:   112 MVNICWWYYISKFTEFFDTLFFILRKKNEHVSTLHVIHHGCMPFSVWMGLKFAPGGHSTF 171

Query:    61 FALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVECNY 120
             FALLN+FVHI+MYFYYM+ AMGP+YQKYIWWKKYLTTFQMVQFVAIF HQFQLLF EC+Y
Sbjct:   172 FALLNSFVHIVMYFYYMIAAMGPKYQKYIWWKKYLTTFQMVQFVAIFTHQFQLLFRECDY 231

Query:   121 PKSFMVWIALHGVLFLFLFSDFYKQRY 147
             PK FMVWI LHGV+FLFLFSDFYK +Y
Sbjct:   232 PKGFMVWIGLHGVMFLFLFSDFYKAKY 258




GO:0006633 "fatty acid biosynthetic process" evidence=ISS
GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0037534 CG2781 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
RGD|1310560 Elovl7 "ELOVL fatty acid elongase 7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5485 elovl7b "ELOVL family member 7, elongation of long chain fatty acids (yeast) b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A1L3X0 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D6RHD0 ELOVL7 "Elongation of very long chain fatty acids protein 7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFT7 ELOVL7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9NT60 ELOVL7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
D4ADY9ELOV7_RAT2, ., 3, ., 1, ., n, 80.53930.83500.5765yesN/A
Q9D2Y9ELOV7_MOUSE2, ., 3, ., 1, ., n, 80.50880.85560.5907yesN/A
A0JNC4ELOV7_BOVIN2, ., 3, ., 1, ., n, 80.53330.83500.5765yesN/A
A1L3X0ELOV7_HUMAN2, ., 3, ., 1, ., n, 80.53930.83500.5765yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query194
pfam01151244 pfam01151, ELO, GNS1/SUR4 family 8e-50
PTZ00251272 PTZ00251, PTZ00251, fatty acid elongase; Provision 1e-06
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score =  160 bits (408), Expect = 8e-50
 Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 8/161 (4%)

Query: 1   MARTCWWY--YFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHS 58
           M    +WY  + SKF E  DT F ++RKK  Q+S LHV HH  M +  W+G+K+ PGGH 
Sbjct: 84  MGLVGFWYWLFLSKFLELLDTVFLVLRKKQRQLSFLHVYHHATMLLYSWLGLKYGPGGHF 143

Query: 59  TFFALLNTFVHIIMYFYYMMTAMGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQLLFVE- 117
            F ALLN+FVH+IMYFYY + A+G      +WWKKY+T  Q++QFV    H    L+   
Sbjct: 144 WFIALLNSFVHVIMYFYYFLAALGAR-GLPVWWKKYITQLQIIQFVLGLAHVGYALYNYT 202

Query: 118 ---CNYPKSFMVWIA-LHGVLFLFLFSDFYKQRYTPKDKVT 154
              C  P    V +  ++ V +LFLF +FY + Y    K  
Sbjct: 203 KGGCGGPFPKAVRLGLVYYVSYLFLFLNFYIKSYKKPKKKK 243


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

>gnl|CDD|140278 PTZ00251, PTZ00251, fatty acid elongase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 194
KOG3071|consensus274 100.0
PF01151250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 100.0
PTZ00251272 fatty acid elongase; Provisional 100.0
KOG3072|consensus282 100.0
>KOG3071|consensus Back     alignment and domain information
Probab=100.00  E-value=3.1e-54  Score=376.14  Aligned_cols=157  Identities=45%  Similarity=0.836  Sum_probs=146.2

Q ss_pred             CccchhhHHhHhhhhhhhhhhhhhccCCCceeEeeeehhccchhheeccceeccCCcchhhhhHhHHHHHHHHHHHHHHH
Q psy598            1 MARTCWWYYFSKFTEFFDTFFFIMRKKYNQVSTLHVIHHGIMPMSVWMGMKFAPGGHSTFFALLNTFVHIIMYFYYMMTA   80 (194)
Q Consensus         1 ~~~~~w~fylSK~~EllDTvf~VLRKK~~qlsFLHvYHH~~~~~~~w~~~~~~~~g~~~~~~~lNs~VHviMY~YY~l~a   80 (194)
                      +++++|+||+||+.||+||+|+|||||++|+||||+|||++|++.+|.++++.++|++.+.+.+|++||++||+||+++|
T Consensus       109 ~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH~~m~~~~~~~l~~~~~g~~~~~~~lNs~VHviMY~YYflsa  188 (274)
T KOG3071|consen  109 ERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHHGVMAFLSYLWLKFYGGGHGFFAILLNSFVHVIMYGYYFLSA  188 (274)
T ss_pred             ehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEecchHHHhhhheeEEeCCceeeeeeehhhhHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             hCCCccchhhhhhhhcchhhhhhhHHHhhhhhh-hcc-CCCCchH-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCc
Q psy598           81 MGPEYQKYIWWKKYLTTFQMVQFVAIFVHQFQL-LFV-ECNYPKS-FMVWIALHGVLFLFLFSDFYKQRYTPKDKVTGKP  157 (194)
Q Consensus        81 ~g~~~~~~lwwKk~IT~lQivQFvi~~~~~~~~-~~~-~C~~~~~-~~~~~~~~~~s~l~LF~nFy~~~Y~~~~~k~~~~  157 (194)
                      +||++++++|||+++|.+|++||++..+|..+. ++. +|++|++ ..+.+..++++|++||+|||+++|.|+++++.++
T Consensus       189 ~G~~v~~~lWWkky~t~vQlvqf~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~l~LF~nFY~~tY~k~~~~~~~~  268 (274)
T KOG3071|consen  189 FGPRVQWYLWWKKYITIVQLVQFLILFVHTLYVHLFKPGCCFGIGAWAFNGSVINVSFLLLFSNFYIKTYKKPKKKKAKK  268 (274)
T ss_pred             hCcCccccchHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhh
Confidence            999999999999999999999999999999887 554 8999998 6667678889999999999999999977665444



>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00