Psyllid ID: psy6079

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------8
Protein Sequence
MQSSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS
Secondary Structure (PSIPRED)
ccEEEEcccccEEEccccccccccEEEEEEcccEEEEccccccccccEEEEEEcccccEEEEccccccccccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEEccccccEEEEccccccccccEEEEEccEEEEEEcccccccccEEEEEccccccEEEEcccccccccEEEEEEcc
Coil and Loop (DISEMBL)
mqssiclhlvFWFPLLLLSYMCLgvgvlepegplyavgghdgwsylntterfdprlrqwsfiapmlsprstagvavlns
Flexible Loop (DISEMBL)
MQSSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSfiapmlsprstagvavlns
Low Complexity Region (SEG)
MQSSIClhlvfwfpllllSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS
Disordered region (IsUnstruct)
****ICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPML*************
Disordered Region (DISOPRED)
MQSSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS
Disordered Region (DISEMBL)
MQSSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS
Disordered Region (DISPRO)
MQSSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQSSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	79	2.2.26 [Sep-21-2011]
Q9C0H6	718	Kelch-like protein 4 OS=H	yes	N/A	0.632	0.069	0.660	3e-18
Q96PQ7	755	Kelch-like protein 5 OS=H	no	N/A	0.683	0.071	0.732	1e-17
Q9NR64	748	Kelch-like protein 1 OS=H	no	N/A	0.772	0.081	0.597	8e-16
Q9JI74	751	Kelch-like protein 1 OS=M	no	N/A	0.772	0.081	0.582	2e-15
B4GRJ2	628	Kelch-like protein diablo	N/A	N/A	0.848	0.106	0.514	5e-11
B4QLQ2	623	Kelch-like protein diablo	N/A	N/A	0.860	0.109	0.507	5e-11
Q16RL8	589	Kelch-like protein diablo	N/A	N/A	0.848	0.113	0.514	5e-11
B4J045	624	Kelch-like protein diablo	N/A	N/A	0.848	0.107	0.514	5e-11
Q2M0J9	628	Kelch-like protein diablo	no	N/A	0.848	0.106	0.514	5e-11
B4PD06	623	Kelch-like protein diablo	N/A	N/A	0.848	0.107	0.514	5e-11

>sp|Q9C0H6|KLHL4_HUMAN Kelch-like protein 4 OS=Homo sapiens GN=KLHL4 PE=1 SV=2

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
           G+GV   EGP+YAVGGHDGWSYLNT ER+DP  RQW+++A M +PRST GV  LN+
Sbjct: 515 GLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPRSTVGVVALNN 570

Homo sapiens (taxid: 9606)

>sp|Q96PQ7|KLHL5_HUMAN Kelch-like protein 5 OS=Homo sapiens GN=KLHL5 PE=2 SV=3

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/56 (73%), Positives = 48/56 (85%), Gaps = 2/56 (3%)

Query: 23  LGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           LGV VLE  GP+YAVGGHDGWSYLNT ER+DP+ RQW+F+A M +PRST GVAVL+
Sbjct: 554 LGVAVLE--GPMYAVGGHDGWSYLNTVERWDPQARQWNFVATMSTPRSTVGVAVLS 607

Homo sapiens (taxid: 9606)

>sp|Q9NR64|KLHL1_HUMAN Kelch-like protein 1 OS=Homo sapiens GN=KLHL1 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 48/67 (71%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRST 71
           W  L  +S    G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ +QW+F+A M   RST
Sbjct: 533 WTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQSQQWTFVASMSIARST 592

Query: 72  AGVAVLN 78
            GVA LN
Sbjct: 593 VGVAALN 599

May play a role in organizing the actin cytoskeleton of the brain cells.

Homo sapiens (taxid: 9606)

>sp|Q9JI74|KLHL1_MOUSE Kelch-like protein 1 OS=Mus musculus GN=Klhl1 PE=1 SV=2

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 48/67 (71%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRST 71
           W  L  +S    G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ +QW+++A M   RST
Sbjct: 536 WTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQSQQWTYVASMSIARST 595

Query: 72  AGVAVLN 78
            GVA LN
Sbjct: 596 VGVAALN 602

May play a role in organizing the actin cytoskeleton of the brain cells.

Mus musculus (taxid: 10090)

>sp|B4GRJ2|KLHDB_DROPE Kelch-like protein diablo OS=Drosophila persimilis GN=dbo PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSF-IAPMLSPRS 70
           W  +  +S    GVGV      LYAVGGHDG SYLN+ ER+DP+  QWS  +AP  S R+
Sbjct: 351 WKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT 410

Query: 71  TAGVAVLN 78
           + GVAVL+
Sbjct: 411 SVGVAVLD 418

Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.

Drosophila persimilis (taxid: 7234)

>sp|B4QLQ2|KLHDB_DROSI Kelch-like protein diablo OS=Drosophila simulans GN=dbo PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSF-IAPMLSPRS 70
           W  +  +S    GVGV      LYAVGGHDG SYLN+ ER+DP+  QWS  +AP  S R+
Sbjct: 349 WKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT 408

Query: 71  TAGVAVLNS 79
           + GVAVL+ 
Sbjct: 409 SVGVAVLDE 417

Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.

Drosophila simulans (taxid: 7240)

>sp|Q16RL8|KLHDB_AEDAE Kelch-like protein diablo OS=Aedes aegypti GN=dbo PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSF-IAPMLSPRS 70
           W  +  +S    GVGV      LYAVGGHDG SYLN+ ER+DP+  QWS  +AP  S R+
Sbjct: 318 WKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT 377

Query: 71  TAGVAVLN 78
           + GVAVL+
Sbjct: 378 SVGVAVLD 385

Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.

Aedes aegypti (taxid: 7159)

>sp|B4J045|KLHDB_DROGR Kelch-like protein diablo OS=Drosophila grimshawi GN=dbo PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSF-IAPMLSPRS 70
           W  +  +S    GVGV      LYAVGGHDG SYLN+ ER+DP+  QWS  +AP  S R+
Sbjct: 350 WKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT 409

Query: 71  TAGVAVLN 78
           + GVAVL+
Sbjct: 410 SVGVAVLD 417

Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.

Drosophila grimshawi (taxid: 7222)

>sp|Q2M0J9|KLHDB_DROPS Kelch-like protein diablo OS=Drosophila pseudoobscura pseudoobscura GN=dbo PE=3 SV=2

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSF-IAPMLSPRS 70
           W  +  +S    GVGV      LYAVGGHDG SYLN+ ER+DP+  QWS  +AP  S R+
Sbjct: 351 WKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT 410

Query: 71  TAGVAVLN 78
           + GVAVL+
Sbjct: 411 SVGVAVLD 418

Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|B4PD06|KLHDB_DROYA Kelch-like protein diablo OS=Drosophila yakuba GN=dbo PE=3 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSF-IAPMLSPRS 70
           W  +  +S    GVGV      LYAVGGHDG SYLN+ ER+DP+  QWS  +AP  S R+
Sbjct: 349 WKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRT 408

Query: 71  TAGVAVLN 78
           + GVAVL+
Sbjct: 409 SVGVAVLD 416

Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.

Drosophila yakuba (taxid: 7245)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
326924390	680	PREDICTED: kelch-like protein 4-like, pa	0.632	0.073	0.696	6e-18
118089489	720	PREDICTED: kelch-like protein 4 [Gallus	0.632	0.069	0.696	8e-18
327284153	716	PREDICTED: kelch-like protein 4-like [An	0.632	0.069	0.696	9e-18
355698674	490	kelch-like 5 [Mustela putorius furo]	0.708	0.114	0.754	1e-17
410917478	924	PREDICTED: kelch-like protein 5-like [Ta	0.886	0.075	0.625	3e-17
195129964	655	GI15240 [Drosophila mojavensis] gi|19390	0.873	0.105	0.613	5e-17
195356387	651	GM22425 [Drosophila sechellia] gi|194133	0.873	0.105	0.613	5e-17
28571155	625	CG17754, isoform D [Drosophila melanogas	0.873	0.110	0.613	6e-17
194769420	655	GF19087 [Drosophila ananassae] gi|190618	0.873	0.105	0.613	6e-17
195481650	654	GE17785 [Drosophila yakuba] gi|194189247	0.873	0.105	0.613	6e-17

>gi|326924390|ref|XP_003208411.1| PREDICTED: kelch-like protein 4-like, partial [Meleagris gallopavo]

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/56 (69%), Positives = 47/56 (83%)

Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
           G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ RQW+++A M +PRST GVA LNS
Sbjct: 477 GLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNS 532

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|118089489|ref|XP_420250.2| PREDICTED: kelch-like protein 4 [Gallus gallus]

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/56 (69%), Positives = 47/56 (83%)

Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
           G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ RQW+++A M +PRST GVA LNS
Sbjct: 517 GLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNS 572

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327284153|ref|XP_003226803.1| PREDICTED: kelch-like protein 4-like [Anolis carolinensis]

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/56 (69%), Positives = 47/56 (83%)

Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
           G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ RQW+++A M +PRST GVA LNS
Sbjct: 513 GLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMATPRSTVGVAALNS 568

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355698674|gb|AES00876.1| kelch-like 5 [Mustela putorius furo]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 50/57 (87%), Gaps = 1/57 (1%)

Query: 23  LGVGVLE-PEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           LGV VLE PEGP+YAVGGHDGWSYLNT ER+DP+ RQW+F+A M +PRST GVAVL+
Sbjct: 403 LGVAVLEGPEGPMYAVGGHDGWSYLNTVERWDPQARQWNFVATMSTPRSTVGVAVLS 459

Source: Mustela putorius furo

Species: Mustela putorius

Genus: Mustela

Family: Mustelidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410917478|ref|XP_003972213.1| PREDICTED: kelch-like protein 5-like [Takifugu rubripes]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 53/72 (73%)

Query: 8   HLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLS 67
           H   W  L  +S    G+GV   EGP+YAVGGHDGWSYL+T ER+DP+ RQWSF+A M +
Sbjct: 706 HSKTWSVLPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLSTVERWDPQARQWSFVASMAT 765

Query: 68  PRSTAGVAVLNS 79
           PRST GVAVLNS
Sbjct: 766 PRSTVGVAVLNS 777

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195129964|ref|XP_002009424.1| GI15240 [Drosophila mojavensis] gi|193907874|gb|EDW06741.1| GI15240 [Drosophila mojavensis]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 55/75 (73%)

Query: 3   SSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFI 62
            S+ L+ + W PL  ++    G+GV   EGPLYAVGGHDGWSYLNT ER+DP  R WS++
Sbjct: 389 ESLDLNTMAWVPLNPMTTPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPSARTWSYV 448

Query: 63  APMLSPRSTAGVAVL 77
           APM S RSTAGVAVL
Sbjct: 449 APMSSMRSTAGVAVL 463

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195356387|ref|XP_002044655.1| GM22425 [Drosophila sechellia] gi|194133236|gb|EDW54752.1| GM22425 [Drosophila sechellia]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 55/75 (73%)

Query: 3   SSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFI 62
            S+ L+ + W PL  ++    G+GV   EGPLYAVGGHDGWSYLNT ER+DP  R WS++
Sbjct: 384 ESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYV 443

Query: 63  APMLSPRSTAGVAVL 77
           APM S RSTAGVAVL
Sbjct: 444 APMSSMRSTAGVAVL 458

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|28571155|ref|NP_788894.1| CG17754, isoform D [Drosophila melanogaster] gi|28381596|gb|AAN09249.2| CG17754, isoform D [Drosophila melanogaster]

 Score = 91.7 bits (226), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 55/75 (73%)

Query: 3   SSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFI 62
            S+ L+ + W PL  ++    G+GV   EGPLYAVGGHDGWSYLNT ER+DP  R WS++
Sbjct: 387 ESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYV 446

Query: 63  APMLSPRSTAGVAVL 77
           APM S RSTAGVAVL
Sbjct: 447 APMSSMRSTAGVAVL 461

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194769420|ref|XP_001966802.1| GF19087 [Drosophila ananassae] gi|190618323|gb|EDV33847.1| GF19087 [Drosophila ananassae]

 Score = 91.7 bits (226), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 55/75 (73%)

Query: 3   SSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFI 62
            S+ L+ + W PL  ++    G+GV   EGPLYAVGGHDGWSYLNT ER+DP  R WS++
Sbjct: 388 ESLDLNTMTWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPVARTWSYV 447

Query: 63  APMLSPRSTAGVAVL 77
           APM S RSTAGVAVL
Sbjct: 448 APMSSMRSTAGVAVL 462

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195481650|ref|XP_002101723.1| GE17785 [Drosophila yakuba] gi|194189247|gb|EDX02831.1| GE17785 [Drosophila yakuba]

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 55/75 (73%)

Query: 3   SSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFI 62
            S+ L+ + W PL  ++    G+GV   EGPLYAVGGHDGWSYLNT ER+DP  R WS++
Sbjct: 387 ESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYV 446

Query: 63  APMLSPRSTAGVAVL 77
           APM S RSTAGVAVL
Sbjct: 447 APMSSMRSTAGVAVL 461

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
UNIPROTKB|F1NIN1	587	KLHL4 "Uncharacterized protein	0.708	0.095	0.696	1.5e-17
UNIPROTKB|Q1EG90	708	Klhl5 "Myocardial ischemic pre	0.696	0.077	0.709	3.4e-17
UNIPROTKB|Q96PQ7	755	KLHL5 "Kelch-like protein 5" [	0.696	0.072	0.709	3.8e-17
FB|FBgn0030114	654	CG17754 [Drosophila melanogast	0.683	0.082	0.759	6.3e-17
UNIPROTKB|G3X6H8	641	KLHL4 "Uncharacterized protein	0.708	0.087	0.660	2.1e-16
UNIPROTKB|D2HZX0	699	KLHL4 "Uncharacterized protein	0.708	0.080	0.660	2.4e-16
UNIPROTKB|F1S1P2	718	KLHL4 "Uncharacterized protein	0.708	0.077	0.660	2.5e-16
UNIPROTKB|Q9C0H6	718	KLHL4 "Kelch-like protein 4" [	0.708	0.077	0.660	2.5e-16
ZFIN|ZDB-GENE-070410-63	567	zgc:162298 "zgc:162298" [Danio	0.670	0.093	0.672	3.5e-16
RGD|1565441	717	Klhl4 "kelch-like family membe	0.708	0.078	0.660	4.2e-16

UNIPROTKB|F1NIN1 KLHL4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 39/56 (69%), Positives = 47/56 (83%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ RQW+++A M +PRST GVA LNS
Sbjct:   384 GLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNS 439

GO:0005730 "nucleolus" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

UNIPROTKB|Q1EG90 Klhl5 "Myocardial ischemic preconditioning associated protein 6" [Rattus norvegicus (taxid:10116)]

 Score = 221 (82.9 bits), Expect = 3.4e-17, P = 3.4e-17
 Identities = 39/55 (70%), Positives = 47/55 (85%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ RQW+F+A M +PRST GVAVL+
Sbjct:   506 GLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNFVATMSTPRSTVGVAVLS 560

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q96PQ7 KLHL5 "Kelch-like protein 5" [Homo sapiens (taxid:9606)]

 Score = 221 (82.9 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 39/55 (70%), Positives = 47/55 (85%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP+ RQW+F+A M +PRST GVAVL+
Sbjct:   553 GLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNFVATMSTPRSTVGVAVLS 607

GO:0003779 "actin binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=NAS

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0030114 CG17754 [Drosophila melanogaster (taxid:7227)]

 Score = 218 (81.8 bits), Expect = 6.3e-17, P = 6.3e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVL 77
             G+GV   EGPLYAVGGHDGWSYLNT ER+DP  R WS++APM S RSTAGVAVL
Sbjct:   408 GLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVL 461

GO:0006911 "phagocytosis, engulfment" evidence=IMP

UNIPROTKB|G3X6H8 KLHL4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 213 (80.0 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP  RQW+++A M +PRST GV  LN+
Sbjct:   514 GLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPRSTVGVVTLNN 569

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|D2HZX0 KLHL4 "Uncharacterized protein" [Ailuropoda melanoleuca (taxid:9646)]

 Score = 213 (80.0 bits), Expect = 2.4e-16, P = 2.4e-16
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP  RQW+++A M +PRST GV  LN+
Sbjct:   515 GLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPRSTVGVVALNN 570

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1S1P2 KLHL4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 213 (80.0 bits), Expect = 2.5e-16, P = 2.5e-16
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP  RQW+++A M +PRST GV  LN+
Sbjct:   515 GLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPRSTVGVVALNN 570

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|Q9C0H6 KLHL4 "Kelch-like protein 4" [Homo sapiens (taxid:9606)]

 Score = 213 (80.0 bits), Expect = 2.5e-16, P = 2.5e-16
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP  RQW+++A M +PRST GV  LN+
Sbjct:   515 GLGVATLEGPMYAVGGHDGWSYLNTVERWDPEGRQWNYVASMSTPRSTVGVVALNN 570

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISS;IDA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

ZFIN|ZDB-GENE-070410-63 zgc:162298 "zgc:162298" [Danio rerio (taxid:7955)]

 Score = 210 (79.0 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 37/55 (67%), Positives = 45/55 (81%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             G+ VLE  GP+YAVGGHDGWSYLNT ER+DP+ RQW+++A M +PRST GV  LN
Sbjct:   513 GIAVLE--GPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVTALN 565

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|1565441 Klhl4 "kelch-like family member 4" [Rattus norvegicus (taxid:10116)]

 Score = 211 (79.3 bits), Expect = 4.2e-16, P = 4.2e-16
 Identities = 37/56 (66%), Positives = 45/56 (80%)

Query:    24 GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
             G+GV   EGP+YAVGGHDGWSYLNT ER+DP  RQW+++A M +PRST GV  LN+
Sbjct:   514 GLGVATLEGPMYAVGGHDGWSYLNTVERWDPDGRQWNYVASMSTPRSTVGVVALNN 569

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0015630 "microtubule cytoskeleton" evidence=IEA;ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C0H6	KLHL4_HUMAN	No assigned EC number	0.6607	0.6329	0.0696	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	79
smart00612	47	smart00612, Kelch, Kelch domain	4e-16
pfam01344	46	pfam01344, Kelch_1, Kelch motif	6e-10
PHA03098	534	PHA03098, PHA03098, kelch-like protein; Provisiona	3e-09
pfam13964	50	pfam13964, Kelch_6, Kelch motif	7e-04
PHA03098	534	PHA03098, PHA03098, kelch-like protein; Provisiona	0.003
pfam13415	48	pfam13415, Kelch_3, Galactose oxidase, central dom	0.004

>gnl|CDD|128874 smart00612, Kelch, Kelch domain

 Score = 64.5 bits (158), Expect = 4e-16
 Identities = 20/45 (44%), Positives = 28/45 (62%)

Query: 34 LYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
          +Y VGG DG   L + E +DP   +W+ +  M +PRS  GVAV+N
Sbjct: 2  IYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVIN 46

Length = 47

>gnl|CDD|201739 pfam01344, Kelch_1, Kelch motif

 Score = 49.2 bits (118), Expect = 6e-10
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 21 MCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPM 65
             G GV+   G +Y +GG+DG   L++ E +DP    WS +  M
Sbjct: 1  PRSGAGVVVLGGKIYVIGGYDGGQSLSSVEVYDPETNTWSKLPSM 45

The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that the Drosophila ring canal kelch protein is related to Galactose Oxidase, for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415. Length = 46

>gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional

 Score = 50.9 bits (122), Expect = 3e-09
 Identities = 19/67 (28%), Positives = 27/67 (40%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRST 71
           W  +  L Y     GV      +Y +GG      LNT E + P   +W    P++ PR  
Sbjct: 323 WNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN 382

Query: 72  AGVAVLN 78
             V  +N
Sbjct: 383 PCVVNVN 389

Length = 534

>gnl|CDD|206134 pfam13964, Kelch_6, Kelch motif

 Score = 33.6 bits (77), Expect = 7e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 34 LYAVGG-HDGWSYLNTTERFDPRLRQWSFIAPMLSPR 69
          +Y  GG  +G    N    +DP    W  + P+ +PR
Sbjct: 14 IYVFGGYSNGSKASNKVLVYDPETGSWEKLPPLPTPR 50

Length = 50

>gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional

 Score = 34.0 bits (78), Expect = 0.003
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 3/45 (6%)

Query: 31  EGPLYAVGG-HDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGV 74
              +Y +GG       L T E F     +WS  +P+  P S  G 
Sbjct: 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPL--PISHYGG 431

Length = 534

>gnl|CDD|222113 pfam13415, Kelch_3, Galactose oxidase, central domain

 Score = 31.5 bits (72), Expect = 0.004
 Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 1/45 (2%)

Query: 34 LYAVGGHDGWS-YLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVL 77
          +Y  GG       LN    +D     W  +  +  PR+     V+
Sbjct: 4  IYVFGGLGDGGTRLNDLWVYDLDTNTWEKLGDLPGPRAGHAATVI 48

Length = 48

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	79
KOG4441|consensus	571		99.84
KOG4441|consensus	571		99.83
PHA02713	557	hypothetical protein; Provisional	99.8
PF13964	50	Kelch_6: Kelch motif	99.79
PHA02713	557	hypothetical protein; Provisional	99.77
PHA02790	480	Kelch-like protein; Provisional	99.75
PHA02790	480	Kelch-like protein; Provisional	99.7
PHA03098	534	kelch-like protein; Provisional	99.7
PLN02153	341	epithiospecifier protein	99.69
PF01344	47	Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is	99.68
PHA03098	534	kelch-like protein; Provisional	99.67
PLN02153	341	epithiospecifier protein	99.67
smart00612	47	Kelch Kelch domain.	99.66
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	99.66
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	99.65
PLN02193	470	nitrile-specifier protein	99.64
PLN02193	470	nitrile-specifier protein	99.63
PF13415	49	Kelch_3: Galactose oxidase, central domain	99.63
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	99.58
PF07646	49	Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is	99.58
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	99.56
KOG0379|consensus	482		99.55
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	99.49
PF13418	49	Kelch_4: Galactose oxidase, central domain; PDB: 2	99.49
KOG4693|consensus	392		99.48
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	99.48
KOG4693|consensus	392		99.4
KOG1230|consensus	521		99.33
KOG0379|consensus	482		99.29
PLN02772	398	guanylate kinase	99.13
PF13854	42	Kelch_5: Kelch motif	99.12
KOG1230|consensus	521		99.09
KOG4152|consensus	830		99.03
COG3055	381	Uncharacterized protein conserved in bacteria [Fun	98.82
COG3055	381	Uncharacterized protein conserved in bacteria [Fun	98.43
KOG4152|consensus	830		98.09
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	98.0
smart00612	47	Kelch Kelch domain.	97.82
KOG2437|consensus	723		97.53
PF13415	49	Kelch_3: Galactose oxidase, central domain	97.28
KOG2437|consensus	723		97.12
PF13964	50	Kelch_6: Kelch motif	96.97
PLN02772	398	guanylate kinase	96.97
TIGR01640	230	F_box_assoc_1 F-box protein interaction domain. Th	96.43
PF01344	47	Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is	96.38
TIGR01640	230	F_box_assoc_1 F-box protein interaction domain. Th	95.92
PF13418	49	Kelch_4: Galactose oxidase, central domain; PDB: 2	95.83
PF07646	49	Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is	95.37
PF12768	281	Rax2: Cortical protein marker for cell polarity	95.19
PF07893	342	DUF1668: Protein of unknown function (DUF1668); In	89.88
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	88.51
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	85.37
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	81.01

>KOG4441|consensus

Probab=99.84  E-value=2e-20  Score=118.77  Aligned_cols=75  Identities=43%  Similarity=0.641  Sum_probs=69.6

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCC-CCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWS-YLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+|||.+++|+.+++|+  |.+++++++  +++||++||.++.. .++++++|||.+++|+.+++|+.+|..++++++++
T Consensus       399 E~YDp~~~~W~~va~m~~~r~~~gv~~~--~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~  476 (571)
T KOG4441|consen  399 ECYDPVTNKWTPVAPMLTRRSGHGVAVL--GGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNG  476 (571)
T ss_pred             EEecCCCCcccccCCCCcceeeeEEEEE--CCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECC
Confidence            48999999999999885  788999999  99999999988776 79999999999999999999999999999999875

>KOG4441|consensus

Probab=99.83  E-value=2.2e-20  Score=118.60  Aligned_cols=75  Identities=43%  Similarity=0.685  Sum_probs=70.5

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      -+||+++++|+.+++|.  |..++++++  ++.||++||+++...++++|+|||.+++|+.+++|+.+|..+++++++|
T Consensus       352 e~YD~~~~~W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g  428 (571)
T KOG4441|consen  352 ERYDPRTNQWTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGG  428 (571)
T ss_pred             EEecCCCCceeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECC
Confidence            37999999999999886  889999999  9999999999998889999999999999999999999999999999875

>PHA02713 hypothetical protein; Provisional

Probab=99.80  E-value=5.4e-19  Score=112.18  Aligned_cols=75  Identities=21%  Similarity=0.356  Sum_probs=67.9

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|..+++|+  |..++++++  +++||++||.++....+++++|||.+++|..+++|+.+|..+++++++|
T Consensus       323 ~~Yd~~~n~W~~~~~m~~~R~~~~~~~~--~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g  399 (557)
T PHA02713        323 YKINIENKIHVELPPMIKNRCRFSLAVI--DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQ  399 (557)
T ss_pred             EEEECCCCeEeeCCCCcchhhceeEEEE--CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECC
Confidence            47999999999999876  788889999  9999999998766667899999999999999999999999999988775

>PF13964 Kelch_6: Kelch motif

Probab=99.79  E-value=6.7e-19  Score=80.16  Aligned_cols=49  Identities=35%  Similarity=0.667  Sum_probs=45.2

Q ss_pred             ccceeeeEEECCCCeEEEEcCCCC-CCCCCeEEEEeCCCCcEEeccCCCCCC
Q psy6079          19 SYMCLGVGVLEPEGPLYAVGGHDG-WSYLNTTERFDPRLRQWSFIAPMLSPR   69 (79)
Q Consensus        19 ~r~~~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~r   69 (79)
                      ||.+++++++  +++|||+||..+ ....+++++||+++++|+.+++||.+|
T Consensus         1 pR~~~s~v~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~mp~pR   50 (50)
T PF13964_consen    1 PRYGHSAVVV--GGKIYVFGGYDNSGKYSNDVERYDPETNTWEQLPPMPTPR   50 (50)
T ss_pred             CCccCEEEEE--CCEEEEECCCCCCCCccccEEEEcCCCCcEEECCCCCCCC
Confidence            5888999999  999999999887 566899999999999999999999987

>PHA02713 hypothetical protein; Provisional

Probab=99.77  E-value=2.1e-18  Score=109.52  Aligned_cols=74  Identities=15%  Similarity=0.113  Sum_probs=65.2

Q ss_pred             eecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCC-CCeEEEEeCCC-CcEEeccCCCCCCCceeEEEECC
Q psy6079           4 SICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSY-LNTTERFDPRL-RQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         4 ~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~yd~~~-~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      +|||.+++|+.+++|+  |..++++++  +++||++||.++... .+.+++|||.+ ++|+.+++|+.+|..+++++++|
T Consensus       436 ~YDP~td~W~~v~~m~~~r~~~~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~~  513 (557)
T PHA02713        436 RYDTVNNIWETLPNFWTGTIRPGVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDN  513 (557)
T ss_pred             EECCCCCeEeecCCCCcccccCcEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEECC
Confidence            6999999999999885  788888999  999999999875433 35689999999 89999999999999999999875

>PHA02790 Kelch-like protein; Provisional

Probab=99.75  E-value=1.3e-17  Score=104.47  Aligned_cols=73  Identities=22%  Similarity=0.296  Sum_probs=64.5

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.+++|+  |..++++++  +++||++||..+.  .+++++|||++++|..+++|+.+|..+++++++|
T Consensus       334 e~ydp~~n~W~~~~~l~~~r~~~~~~~~--~g~IYviGG~~~~--~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~  408 (480)
T PHA02790        334 ERWFHGDAAWVNMPSLLKPRCNPAVASI--NNVIYVIGGHSET--DTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGR  408 (480)
T ss_pred             EEEECCCCeEEECCCCCCCCcccEEEEE--CCEEEEecCcCCC--CccEEEEeCCCCEEEeCCCCCCccccceEEEECC
Confidence            47999999999999886  778888889  9999999997643  3679999999999999999999999998888775

>PHA02790 Kelch-like protein; Provisional

Probab=99.70  E-value=1.4e-16  Score=99.78  Aligned_cols=72  Identities=22%  Similarity=0.356  Sum_probs=63.4

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+|||.+++|..+++|+  |..++++++  +++||++||.++.   +++++||+.+++|..+++|+.+|..+++++++|
T Consensus       290 ~~Ydp~~~~W~~~~~m~~~r~~~~~v~~--~~~iYviGG~~~~---~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g  363 (480)
T PHA02790        290 IAVNYISNNWIPIPPMNSPRLYASGVPA--NNKLYVVGGLPNP---TSVERWFHGDAAWVNMPSLLKPRCNPAVASINN  363 (480)
T ss_pred             EEEECCCCEEEECCCCCchhhcceEEEE--CCEEEEECCcCCC---CceEEEECCCCeEEECCCCCCCCcccEEEEECC
Confidence            36999999999999775  777888888  9999999997532   579999999999999999999999999988765

>PHA03098 kelch-like protein; Provisional

Probab=99.70  E-value=1.2e-16  Score=100.81  Aligned_cols=75  Identities=27%  Similarity=0.361  Sum_probs=66.9

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|..+++|+  |.+++++++  +++||++||..+....+++++||+.+++|..+++||.+|..+++++++|
T Consensus       314 ~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~~~~  390 (534)
T PHA03098        314 VSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNN  390 (534)
T ss_pred             EEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEEECC
Confidence            47999999999999664  788899999  9999999998765567899999999999999999999999999887764

>PLN02153 epithiospecifier protein

Probab=99.69  E-value=4.6e-16  Score=93.86  Aligned_cols=75  Identities=15%  Similarity=0.225  Sum_probs=63.2

Q ss_pred             ceecCCCCCeeecCCC---ccc---eeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCC-----CCCCCc
Q psy6079           3 SSICLHLVFWFPLLLL---SYM---CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPM-----LSPRST   71 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~---~r~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-----~~~r~~   71 (79)
                      .+||+.+++|+.++++   ||.   +++++++  +++||+|||..+...++++++||+++++|+.+++|     |.+|..
T Consensus        53 ~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~  130 (341)
T PLN02153         53 YVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTF  130 (341)
T ss_pred             EEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCcee
Confidence            4799999999998754   342   5777888  99999999987666678999999999999999887     789999


Q ss_pred             eeEEEECC
Q psy6079          72 AGVAVLNS   79 (79)
Q Consensus        72 ~~~~~~~~   79 (79)
                      |+++++++
T Consensus       131 ~~~~~~~~  138 (341)
T PLN02153        131 HSMASDEN  138 (341)
T ss_pred             eEEEEECC
Confidence            99887754

>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []

Probab=99.68  E-value=8.6e-17  Score=72.18  Aligned_cols=46  Identities=28%  Similarity=0.508  Sum_probs=41.6

Q ss_pred             ccceeeeEEECCCCeEEEEcCCCC-CCCCCeEEEEeCCCCcEEeccCCC
Q psy6079          19 SYMCLGVGVLEPEGPLYAVGGHDG-WSYLNTTERFDPRLRQWSFIAPML   66 (79)
Q Consensus        19 ~r~~~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~   66 (79)
                      ||.+++++++  +++|||+||..+ ....+++++||+++++|+.+++||
T Consensus         1 pR~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~mp   47 (47)
T PF01344_consen    1 PRSGHAAVVV--GNKIYVIGGYDGNNQPTNSVEVYDPETNTWEELPPMP   47 (47)
T ss_dssp             -BBSEEEEEE--TTEEEEEEEBESTSSBEEEEEEEETTTTEEEEEEEES
T ss_pred             CCccCEEEEE--CCEEEEEeeecccCceeeeEEEEeCCCCEEEEcCCCC
Confidence            5888999999  999999999887 566999999999999999999886

This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....

>PHA03098 kelch-like protein; Provisional

Probab=99.67  E-value=7.5e-16  Score=97.26  Aligned_cols=75  Identities=19%  Similarity=0.135  Sum_probs=64.5

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCC-CCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGW-SYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||.... ..++++++||+.+++|..+++||.+|..++++++++
T Consensus       361 ~~yd~~~~~W~~~~~lp~~r~~~~~~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~  438 (534)
T PHA03098        361 ESWKPGESKWREEPPLIFPRYNPCVVNV--NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDG  438 (534)
T ss_pred             EEEcCCCCceeeCCCcCcCCccceEEEE--CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECC
Confidence            47999999999998664  788888888  9999999996533 346899999999999999999999999998887664

>PLN02153 epithiospecifier protein

Probab=99.67  E-value=1.1e-15  Score=92.24  Aligned_cols=75  Identities=21%  Similarity=0.200  Sum_probs=61.6

Q ss_pred             ceecCCCCCeeecCCC-------ccceeeeEEECCCCeEEEEcCCCCCC------CCCeEEEEeCCCCcEEeccCCC---
Q psy6079           3 SSICLHLVFWFPLLLL-------SYMCLGVGVLEPEGPLYAVGGHDGWS------YLNTTERFDPRLRQWSFIAPML---   66 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~-------~r~~~~~~~~~~~~~iyv~GG~~~~~------~~~~~~~yd~~~~~W~~~~~~~---   66 (79)
                      .+||+.+++|+.++++       +|..+++++.  +++|||+||.....      .++++++||+++++|..++++.   
T Consensus       104 ~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~  181 (341)
T PLN02153        104 YSYDTVKNEWTFLTKLDEEGGPEARTFHSMASD--ENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENF  181 (341)
T ss_pred             EEEECCCCEEEEeccCCCCCCCCCceeeEEEEE--CCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCC
Confidence            4799999999988743       5888888888  99999999976321      3578999999999999998764   


Q ss_pred             CCCCceeEEEECC
Q psy6079          67 SPRSTAGVAVLNS   79 (79)
Q Consensus        67 ~~r~~~~~~~~~~   79 (79)
                      .+|..++++++++
T Consensus       182 ~~r~~~~~~~~~~  194 (341)
T PLN02153        182 EKRGGAGFAVVQG  194 (341)
T ss_pred             CCCCcceEEEECC
Confidence            7888888877654

>smart00612 Kelch Kelch domain

Probab=99.66  E-value=3.6e-16  Score=69.78  Aligned_cols=47  Identities=43%  Similarity=0.800  Sum_probs=42.7

Q ss_pred             eEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079          33 PLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus        33 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      +||++||..+....+++++||+.+++|+.+++|+.+|..+++++++|
T Consensus         1 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~g   47 (47)
T smart00612        1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPSMPTPRSGHGVAVING   47 (47)
T ss_pred             CEEEEeCCCCCceeeeEEEECCCCCeEccCCCCCCccccceEEEeCC
Confidence            48999998765568899999999999999999999999999999875

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=99.66  E-value=1.3e-15  Score=91.32  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=61.3

Q ss_pred             eecCCCCCe----eecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCC-CCCCceeEEE
Q psy6079           4 SICLHLVFW----FPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPML-SPRSTAGVAV   76 (79)
Q Consensus         4 ~~~~~~~~W----~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~   76 (79)
                      +||+.+++|    +.++++|  |..++++++  +++||++||.......+++++||+.+++|+.+++|+ .+|..+++++
T Consensus        92 ~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~--~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~~  169 (323)
T TIGR03548        92 RITLDESKEELICETIGNLPFTFENGSACYK--DGTLYVGGGNRNGKPSNKSYLFNLETQEWFELPDFPGEPRVQPVCVK  169 (323)
T ss_pred             EEEEcCCceeeeeeEcCCCCcCccCceEEEE--CCEEEEEeCcCCCccCceEEEEcCCCCCeeECCCCCCCCCCcceEEE
Confidence            688888887    6777665  677888888  999999999765555789999999999999999988 4788888777


Q ss_pred             ECC
Q psy6079          77 LNS   79 (79)
Q Consensus        77 ~~~   79 (79)
                      +++
T Consensus       170 ~~~  172 (323)
T TIGR03548       170 LQN  172 (323)
T ss_pred             ECC
Confidence            654

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=99.65  E-value=1.6e-15  Score=91.61  Aligned_cols=75  Identities=13%  Similarity=0.118  Sum_probs=58.9

Q ss_pred             ceecCCCCCeeecC-CCcc--ceeeeE-EECCCCeEEEEcCCCCCC----------------------------------
Q psy6079           3 SSICLHLVFWFPLL-LLSY--MCLGVG-VLEPEGPLYAVGGHDGWS----------------------------------   44 (79)
Q Consensus         3 ~~~~~~~~~W~~~~-~~~r--~~~~~~-~~~~~~~iyv~GG~~~~~----------------------------------   44 (79)
                      .+||+.+++|+.++ ++||  .+++++ ++  +++||++||.+...                                  
T Consensus        88 ~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (346)
T TIGR03547        88 YRYDPKKNSWQKLDTRSPVGLLGASGFSLH--NGQAYFTGGVNKNIFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYF  165 (346)
T ss_pred             EEEECCCCEEecCCCCCCCcccceeEEEEe--CCEEEEEcCcChHHHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcC
Confidence            47999999999997 5565  344444 56  99999999976321                                  


Q ss_pred             CCCeEEEEeCCCCcEEeccCCCC-CCCceeEEEECC
Q psy6079          45 YLNTTERFDPRLRQWSFIAPMLS-PRSTAGVAVLNS   79 (79)
Q Consensus        45 ~~~~~~~yd~~~~~W~~~~~~~~-~r~~~~~~~~~~   79 (79)
                      ..+++++||+.+++|..+++||. +|..++++++++
T Consensus       166 ~~~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~  201 (346)
T TIGR03547       166 WNKNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGN  201 (346)
T ss_pred             ccceEEEEECCCCceeECccCCCCcCCCceEEEECC
Confidence            13789999999999999999986 688888877764

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PLN02193 nitrile-specifier protein

Probab=99.64  E-value=3.4e-15  Score=93.48  Aligned_cols=75  Identities=21%  Similarity=0.344  Sum_probs=63.2

Q ss_pred             ceecCCCCCeeecCC---Cc---cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCC---CCCCCcee
Q psy6079           3 SSICLHLVFWFPLLL---LS---YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPM---LSPRSTAG   73 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~---~~---r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---~~~r~~~~   73 (79)
                      .+||+.+++|+.+++   +|   |..++++++  +++|||+||.+....++++++||+.+++|..++++   |.+|..|+
T Consensus       196 ~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~--~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~  273 (470)
T PLN02193        196 YVFDLETRTWSISPATGDVPHLSCLGVRMVSI--GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHS  273 (470)
T ss_pred             EEEECCCCEEEeCCCCCCCCCCcccceEEEEE--CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceE
Confidence            479999999998763   33   356778888  99999999988766689999999999999999888   78999999


Q ss_pred             EEEECC
Q psy6079          74 VAVLNS   79 (79)
Q Consensus        74 ~~~~~~   79 (79)
                      +++.++
T Consensus       274 ~~~~~~  279 (470)
T PLN02193        274 MAADEE  279 (470)
T ss_pred             EEEECC
Confidence            887653

>PLN02193 nitrile-specifier protein

Probab=99.63  E-value=4.2e-15  Score=93.06  Aligned_cols=75  Identities=20%  Similarity=0.254  Sum_probs=64.2

Q ss_pred             ceecCCCCCeeecCCC-----ccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccC---CCCCCCceeE
Q psy6079           3 SSICLHLVFWFPLLLL-----SYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAP---MLSPRSTAGV   74 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~-----~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~   74 (79)
                      .+||+.+++|+.++++     +|..+++++.  +++|||+||.+....++++++||+.+++|..++.   ++.+|..+++
T Consensus       247 ~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~--~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~  324 (470)
T PLN02193        247 YSFDTTTNEWKLLTPVEEGPTPRSFHSMAAD--EENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGL  324 (470)
T ss_pred             EEEECCCCEEEEcCcCCCCCCCccceEEEEE--CCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEE
Confidence            4799999999998754     4888888888  9999999998876668899999999999999864   5678988888


Q ss_pred             EEECC
Q psy6079          75 AVLNS   79 (79)
Q Consensus        75 ~~~~~   79 (79)
                      +++++
T Consensus       325 ~~~~g  329 (470)
T PLN02193        325 EVVQG  329 (470)
T ss_pred             EEECC
Confidence            87653

>PF13415 Kelch_3: Galactose oxidase, central domain

Probab=99.63  E-value=2e-15  Score=68.37  Aligned_cols=47  Identities=34%  Similarity=0.527  Sum_probs=42.4

Q ss_pred             CCeEEEEcCCC--CCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEE
Q psy6079          31 EGPLYAVGGHD--GWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVL   77 (79)
Q Consensus        31 ~~~iyv~GG~~--~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~   77 (79)
                      +++|||+||..  ....++++++||+.+++|++++++|.+|..|+++++
T Consensus         1 g~~~~vfGG~~~~~~~~~nd~~~~~~~~~~W~~~~~~P~~R~~h~~~~i   49 (49)
T PF13415_consen    1 GNKLYVFGGYDDDGGTRLNDVWVFDLDTNTWTRIGDLPPPRSGHTATVI   49 (49)
T ss_pred             CCEEEEECCcCCCCCCEecCEEEEECCCCEEEECCCCCCCccceEEEEC
Confidence            47899999988  455689999999999999999999999999999874

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=99.58  E-value=2.1e-14  Score=86.70  Aligned_cols=74  Identities=18%  Similarity=0.222  Sum_probs=57.2

Q ss_pred             ceecC--CCCCeeecCCCc---cceeeeEEECCCCeEEEEcCCCCCC------CCCeEEEEeCCCCcEEecc-CCCCCCC
Q psy6079           3 SSICL--HLVFWFPLLLLS---YMCLGVGVLEPEGPLYAVGGHDGWS------YLNTTERFDPRLRQWSFIA-PMLSPRS   70 (79)
Q Consensus         3 ~~~~~--~~~~W~~~~~~~---r~~~~~~~~~~~~~iyv~GG~~~~~------~~~~~~~yd~~~~~W~~~~-~~~~~r~   70 (79)
                      .+||+  .+++|..+++||   |..++++++  +++|||+||.....      .++++++||+.+++|+.++ +++.+|.
T Consensus        32 ~~~d~~~~~~~W~~l~~~p~~~R~~~~~~~~--~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~  109 (346)
T TIGR03547        32 YKLDLKKPSKGWQKIADFPGGPRNQAVAAAI--DGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLL  109 (346)
T ss_pred             EEEECCCCCCCceECCCCCCCCcccceEEEE--CCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCccc
Confidence            35665  578999999764   677888889  99999999975321      3678999999999999997 4566676


Q ss_pred             ceeEE-EEC
Q psy6079          71 TAGVA-VLN   78 (79)
Q Consensus        71 ~~~~~-~~~   78 (79)
                      .++++ +++
T Consensus       110 ~~~~~~~~~  118 (346)
T TIGR03547       110 GASGFSLHN  118 (346)
T ss_pred             ceeEEEEeC
Confidence            66655 444

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []

Probab=99.58  E-value=1.3e-14  Score=65.66  Aligned_cols=46  Identities=33%  Similarity=0.488  Sum_probs=40.4

Q ss_pred             ccceeeeEEECCCCeEEEEcCC---CCCCCCCeEEEEeCCCCcEEeccCCC
Q psy6079          19 SYMCLGVGVLEPEGPLYAVGGH---DGWSYLNTTERFDPRLRQWSFIAPML   66 (79)
Q Consensus        19 ~r~~~~~~~~~~~~~iyv~GG~---~~~~~~~~~~~yd~~~~~W~~~~~~~   66 (79)
                      ||.+++++++  +++||++||+   ......+++++||+++++|+.+++|+
T Consensus         1 ~r~~hs~~~~--~~kiyv~GG~~~~~~~~~~~~v~~~d~~t~~W~~~~~~g   49 (49)
T PF07646_consen    1 PRYGHSAVVL--DGKIYVFGGYGTDNGGSSSNDVWVFDTETNQWTELSPMG   49 (49)
T ss_pred             CccceEEEEE--CCEEEEECCcccCCCCcccceeEEEECCCCEEeecCCCC
Confidence            5788999999  9999999999   34455899999999999999998874

This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=99.56  E-value=3.9e-14  Score=86.63  Aligned_cols=75  Identities=15%  Similarity=0.118  Sum_probs=57.8

Q ss_pred             ceecCCCCCeeecCC-Ccc--ceeeeEE-ECCCCeEEEEcCCCCC----------------------------------C
Q psy6079           3 SSICLHLVFWFPLLL-LSY--MCLGVGV-LEPEGPLYAVGGHDGW----------------------------------S   44 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~-~~r--~~~~~~~-~~~~~~iyv~GG~~~~----------------------------------~   44 (79)
                      .+||+.+++|+.+++ +|+  .++++++ .  +++||++||....                                  .
T Consensus       109 ~~YD~~~n~W~~~~~~~p~~~~~~~~~~~~--~~~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~  186 (376)
T PRK14131        109 YKYDPKTNSWQKLDTRSPVGLAGHVAVSLH--NGKAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYF  186 (376)
T ss_pred             EEEeCCCCEEEeCCCCCCCcccceEEEEee--CCEEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcC
Confidence            369999999999984 354  4455555 6  9999999997531                                  0


Q ss_pred             CCCeEEEEeCCCCcEEeccCCCC-CCCceeEEEECC
Q psy6079          45 YLNTTERFDPRLRQWSFIAPMLS-PRSTAGVAVLNS   79 (79)
Q Consensus        45 ~~~~~~~yd~~~~~W~~~~~~~~-~r~~~~~~~~~~   79 (79)
                      ..+++++||+.+++|..+++||. +|..++++++++
T Consensus       187 ~~~~v~~YD~~t~~W~~~~~~p~~~~~~~a~v~~~~  222 (376)
T PRK14131        187 FNKEVLSYDPSTNQWKNAGESPFLGTAGSAVVIKGN  222 (376)
T ss_pred             cCceEEEEECCCCeeeECCcCCCCCCCcceEEEECC
Confidence            14689999999999999999996 677777777654

>KOG0379|consensus

Probab=99.55  E-value=4.4e-14  Score=88.82  Aligned_cols=75  Identities=24%  Similarity=0.272  Sum_probs=65.9

Q ss_pred             ceecCCCCCeeecC-----CCccceeeeEEECCCCeEEEEcCCCCCC-CCCeEEEEeCCCCcEEec---cCCCCCCCcee
Q psy6079           3 SSICLHLVFWFPLL-----LLSYMCLGVGVLEPEGPLYAVGGHDGWS-YLNTTERFDPRLRQWSFI---APMLSPRSTAG   73 (79)
Q Consensus         3 ~~~~~~~~~W~~~~-----~~~r~~~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~---~~~~~~r~~~~   73 (79)
                      |.||+.+.+|..+.     |.+|.+|++++.  ++++||+||..... ..+++++||+++.+|.++   ...|.||.+|+
T Consensus       142 ~~~d~~t~~W~~l~~~~~~P~~r~~Hs~~~~--g~~l~vfGG~~~~~~~~ndl~i~d~~~~~W~~~~~~g~~P~pR~gH~  219 (482)
T KOG0379|consen  142 HSLDLSTRTWSLLSPTGDPPPPRAGHSATVV--GTKLVVFGGIGGTGDSLNDLHIYDLETSTWSELDTQGEAPSPRYGHA  219 (482)
T ss_pred             EeccCCCCcEEEecCcCCCCCCcccceEEEE--CCEEEEECCccCcccceeeeeeeccccccceecccCCCCCCCCCCce
Confidence            67999999999986     556999999999  99999999987665 689999999999999988   45678999999


Q ss_pred             EEEECC
Q psy6079          74 VAVLNS   79 (79)
Q Consensus        74 ~~~~~~   79 (79)
                      +++.++
T Consensus       220 ~~~~~~  225 (482)
T KOG0379|consen  220 MVVVGN  225 (482)
T ss_pred             EEEECC
Confidence            988753

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=99.49  E-value=3.4e-13  Score=80.94  Aligned_cols=67  Identities=12%  Similarity=0.079  Sum_probs=57.4

Q ss_pred             CeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcE----EeccCCCCCCCceeEEEECC
Q psy6079          11 FWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQW----SFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus        11 ~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W----~~~~~~~~~r~~~~~~~~~~   79 (79)
                      +|..+++||  |..++++++  +++||++||..+...++++++||+.+++|    ..+++||.+|..++++++++
T Consensus        52 ~W~~~~~lp~~r~~~~~~~~--~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~  124 (323)
T TIGR03548        52 KWVKDGQLPYEAAYGASVSV--ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDG  124 (323)
T ss_pred             eEEEcccCCccccceEEEEE--CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECC
Confidence            799988665  666777888  99999999987766688999999999998    78899999999999888764

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B

Probab=99.49  E-value=3.9e-14  Score=64.01  Aligned_cols=47  Identities=23%  Similarity=0.342  Sum_probs=30.1

Q ss_pred             ccceeeeEEECCCCeEEEEcCCCCC-CCCCeEEEEeCCCCcEEeccCCC
Q psy6079          19 SYMCLGVGVLEPEGPLYAVGGHDGW-SYLNTTERFDPRLRQWSFIAPML   66 (79)
Q Consensus        19 ~r~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~~   66 (79)
                      ||.+|+++.+. +++|||+||.+.. ..++++++||+++++|++++++|
T Consensus         1 pR~~h~~~~~~-~~~i~v~GG~~~~~~~~~d~~~~d~~~~~W~~~~~~P   48 (49)
T PF13418_consen    1 PRYGHSAVSIG-DNSIYVFGGRDSSGSPLNDLWIFDIETNTWTRLPSMP   48 (49)
T ss_dssp             --BS-EEEEE--TTEEEEE--EEE-TEE---EEEEETTTTEEEE--SS-
T ss_pred             CcceEEEEEEe-CCeEEEECCCCCCCcccCCEEEEECCCCEEEECCCCC
Confidence            57888888872 4799999998876 46899999999999999998887

>KOG4693|consensus

Probab=99.48  E-value=2e-13  Score=80.22  Aligned_cols=75  Identities=16%  Similarity=0.158  Sum_probs=63.5

Q ss_pred             ceecCCCCCeeecCC---------------CccceeeeEEECCCCeEEEEcCCCCC-CCCCeEEEEeCCCCcEEec---c
Q psy6079           3 SSICLHLVFWFPLLL---------------LSYMCLGVGVLEPEGPLYAVGGHDGW-SYLNTTERFDPRLRQWSFI---A   63 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~---------------~~r~~~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~---~   63 (79)
                      |.+|.++-+|++++|               ..|++++++.+  ++++|+.||+++. ...+.+++|||++++|.+.   .
T Consensus        47 H~lNa~~~RWtk~pp~~~ka~i~~~yp~VPyqRYGHtvV~y--~d~~yvWGGRND~egaCN~Ly~fDp~t~~W~~p~v~G  124 (392)
T KOG4693|consen   47 HVLNAENYRWTKMPPGITKATIESPYPAVPYQRYGHTVVEY--QDKAYVWGGRNDDEGACNLLYEFDPETNVWKKPEVEG  124 (392)
T ss_pred             EEeeccceeEEecCcccccccccCCCCccchhhcCceEEEE--cceEEEEcCccCcccccceeeeeccccccccccceee
Confidence            567888889999873               23788999988  9999999999874 4578999999999999976   5


Q ss_pred             CCCCCCCceeEEEECC
Q psy6079          64 PMLSPRSTAGVAVLNS   79 (79)
Q Consensus        64 ~~~~~r~~~~~~~~~~   79 (79)
                      ..|.+|.+|++|++++
T Consensus       125 ~vPgaRDGHsAcV~gn  140 (392)
T KOG4693|consen  125 FVPGARDGHSACVWGN  140 (392)
T ss_pred             ecCCccCCceeeEECc
Confidence            6788999999999864

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=99.48  E-value=5.6e-13  Score=81.57  Aligned_cols=74  Identities=15%  Similarity=0.240  Sum_probs=56.9

Q ss_pred             ceecCC--CCCeeecCCC---ccceeeeEEECCCCeEEEEcCCCC-C-----CCCCeEEEEeCCCCcEEeccC-CCCCCC
Q psy6079           3 SSICLH--LVFWFPLLLL---SYMCLGVGVLEPEGPLYAVGGHDG-W-----SYLNTTERFDPRLRQWSFIAP-MLSPRS   70 (79)
Q Consensus         3 ~~~~~~--~~~W~~~~~~---~r~~~~~~~~~~~~~iyv~GG~~~-~-----~~~~~~~~yd~~~~~W~~~~~-~~~~r~   70 (79)
                      .+||+.  +++|..++++   +|.+++++++  +++|||+||... .     ..++++++||+.+++|..+++ ++.+|.
T Consensus        53 ~~~d~~~~~~~W~~l~~~p~~~r~~~~~v~~--~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~~~~~~~p~~~~  130 (376)
T PRK14131         53 YKLDLNAPSKGWTKIAAFPGGPREQAVAAFI--DGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQKLDTRSPVGLA  130 (376)
T ss_pred             EEEECCCCCCCeEECCcCCCCCcccceEEEE--CCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEEeCCCCCCCccc
Confidence            357775  4789999865   4778888888  999999999764 1     236789999999999999985 466666


Q ss_pred             ceeEEE-EC
Q psy6079          71 TAGVAV-LN   78 (79)
Q Consensus        71 ~~~~~~-~~   78 (79)
                      .+++++ .+
T Consensus       131 ~~~~~~~~~  139 (376)
T PRK14131        131 GHVAVSLHN  139 (376)
T ss_pred             ceEEEEeeC
Confidence            666655 44

>KOG4693|consensus

Probab=99.40  E-value=1.1e-12  Score=77.25  Aligned_cols=73  Identities=25%  Similarity=0.293  Sum_probs=60.2

Q ss_pred             ecCCCCCeeecC-----CCccceeeeEEECCCCeEEEEcCCCCC--CCCCeEEEEeCCCCcEEecc---CCCCCCCceeE
Q psy6079           5 ICLHLVFWFPLL-----LLSYMCLGVGVLEPEGPLYAVGGHDGW--SYLNTTERFDPRLRQWSFIA---PMLSPRSTAGV   74 (79)
Q Consensus         5 ~~~~~~~W~~~~-----~~~r~~~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~~   74 (79)
                      +|..|+.|..-+     |-.|..++..+.  ++++|+|||+++.  ..++++++|||++..|..|.   .-|.+|...++
T Consensus       221 ld~~T~aW~r~p~~~~~P~GRRSHS~fvY--ng~~Y~FGGYng~ln~HfndLy~FdP~t~~W~~I~~~Gk~P~aRRRqC~  298 (392)
T KOG4693|consen  221 LDLATGAWTRTPENTMKPGGRRSHSTFVY--NGKMYMFGGYNGTLNVHFNDLYCFDPKTSMWSVISVRGKYPSARRRQCS  298 (392)
T ss_pred             EeccccccccCCCCCcCCCcccccceEEE--cceEEEecccchhhhhhhcceeecccccchheeeeccCCCCCcccceeE
Confidence            578899998876     223778889999  9999999999873  35899999999999999984   34788888888


Q ss_pred             EEECC
Q psy6079          75 AVLNS   79 (79)
Q Consensus        75 ~~~~~   79 (79)
                      ++.++
T Consensus       299 ~v~g~  303 (392)
T KOG4693|consen  299 VVSGG  303 (392)
T ss_pred             EEECC
Confidence            87654

>KOG1230|consensus

Probab=99.33  E-value=7.8e-12  Score=76.87  Aligned_cols=72  Identities=24%  Similarity=0.257  Sum_probs=61.4

Q ss_pred             eecCCCCCeeecC----CCccceeeeEEECCCCeEEEEcCCCCCC----CCCeEEEEeCCCCcEEeccC---CCCCCCce
Q psy6079           4 SICLHLVFWFPLL----LLSYMCLGVGVLEPEGPLYAVGGHDGWS----YLNTTERFDPRLRQWSFIAP---MLSPRSTA   72 (79)
Q Consensus         4 ~~~~~~~~W~~~~----~~~r~~~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~---~~~~r~~~   72 (79)
                      .+|..+.+|+++.    |.||.+|.+++.  .++|++|||+.+..    +++++++||+.+-+|.++.+   -|.+|+++
T Consensus       158 ~fd~~trkweql~~~g~PS~RSGHRMvaw--K~~lilFGGFhd~nr~y~YyNDvy~FdLdtykW~Klepsga~PtpRSGc  235 (521)
T KOG1230|consen  158 LFDLKTRKWEQLEFGGGPSPRSGHRMVAW--KRQLILFGGFHDSNRDYIYYNDVYAFDLDTYKWSKLEPSGAGPTPRSGC  235 (521)
T ss_pred             eeeeccchheeeccCCCCCCCccceeEEe--eeeEEEEcceecCCCceEEeeeeEEEeccceeeeeccCCCCCCCCCCcc
Confidence            4788999999997    888999999999  99999999976533    48999999999999999844   27899988


Q ss_pred             eEEEE
Q psy6079          73 GVAVL   77 (79)
Q Consensus        73 ~~~~~   77 (79)
                      ...+.
T Consensus       236 q~~vt  240 (521)
T KOG1230|consen  236 QFSVT  240 (521)
T ss_pred             eEEec
Confidence            77654

>KOG0379|consensus

Probab=99.29  E-value=2.4e-11  Score=76.65  Aligned_cols=74  Identities=26%  Similarity=0.336  Sum_probs=64.3

Q ss_pred             ceecCCCCCeeecC-----CCccceeeeEEECCCCeEEEEcCCC-CCCCCCeEEEEeCCCCcEEecc---CCCCCCCcee
Q psy6079           3 SSICLHLVFWFPLL-----LLSYMCLGVGVLEPEGPLYAVGGHD-GWSYLNTTERFDPRLRQWSFIA---PMLSPRSTAG   73 (79)
Q Consensus         3 ~~~~~~~~~W~~~~-----~~~r~~~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~   73 (79)
                      +.||+++.+|.++.     |.||.+|+++++  ++++++|||.. +...+++++++|..+.+|..++   ..|.+|..|.
T Consensus       193 ~i~d~~~~~W~~~~~~g~~P~pR~gH~~~~~--~~~~~v~gG~~~~~~~l~D~~~ldl~~~~W~~~~~~g~~p~~R~~h~  270 (482)
T KOG0379|consen  193 HIYDLETSTWSELDTQGEAPSPRYGHAMVVV--GNKLLVFGGGDDGDVYLNDVHILDLSTWEWKLLPTGGDLPSPRSGHS  270 (482)
T ss_pred             eeeccccccceecccCCCCCCCCCCceEEEE--CCeEEEEeccccCCceecceEeeecccceeeeccccCCCCCCcceee
Confidence            67999999999986     668999999999  99999999877 5667999999999999999664   5679999998


Q ss_pred             EEEEC
Q psy6079          74 VAVLN   78 (79)
Q Consensus        74 ~~~~~   78 (79)
                      .++.+
T Consensus       271 ~~~~~  275 (482)
T KOG0379|consen  271 LTVSG  275 (482)
T ss_pred             eEEEC
Confidence            87543

>PLN02772 guanylate kinase

Probab=99.13  E-value=4.3e-10  Score=69.29  Aligned_cols=61  Identities=15%  Similarity=0.117  Sum_probs=52.3

Q ss_pred             CCccceeeeEEECCCCeEEEEcCCCCCC-CCCeEEEEeCCCCcEEec---cCCCCCCCceeEEEECC
Q psy6079          17 LLSYMCLGVGVLEPEGPLYAVGGHDGWS-YLNTTERFDPRLRQWSFI---APMLSPRSTAGVAVLNS   79 (79)
Q Consensus        17 ~~~r~~~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~---~~~~~~r~~~~~~~~~~   79 (79)
                      .-|+..++++++  ++++||+||.++.. ..+.+++||..+++|...   ...|.+|.+|+++++++
T Consensus        22 ~~~~~~~tav~i--gdk~yv~GG~~d~~~~~~~v~i~D~~t~~W~~P~V~G~~P~~r~GhSa~v~~~   86 (398)
T PLN02772         22 VKPKNRETSVTI--GDKTYVIGGNHEGNTLSIGVQILDKITNNWVSPIVLGTGPKPCKGYSAVVLNK   86 (398)
T ss_pred             CCCCCcceeEEE--CCEEEEEcccCCCccccceEEEEECCCCcEecccccCCCCCCCCcceEEEECC
Confidence            346888999999  99999999988754 578999999999999975   46689999999999864

>PF13854 Kelch_5: Kelch motif

Probab=99.12  E-value=3.3e-10  Score=49.56  Aligned_cols=39  Identities=23%  Similarity=0.169  Sum_probs=33.4

Q ss_pred             CCccceeeeEEECCCCeEEEEcCCCC--CCCCCeEEEEeCCCC
Q psy6079          17 LLSYMCLGVGVLEPEGPLYAVGGHDG--WSYLNTTERFDPRLR   57 (79)
Q Consensus        17 ~~~r~~~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~yd~~~~   57 (79)
                      |.+|.+|+++++  +++||++||.+.  ...++++++||..+.
T Consensus         2 P~~R~~hs~~~~--~~~iyi~GG~~~~~~~~~~d~~~l~l~sf   42 (42)
T PF13854_consen    2 PSPRYGHSAVVV--GNNIYIFGGYSGNNNSYSNDLYVLDLPSF   42 (42)
T ss_pred             CCCccceEEEEE--CCEEEEEcCccCCCCCEECcEEEEECCCC
Confidence            567999999999  999999999883  556899999998763

>KOG1230|consensus

Probab=99.09  E-value=5.1e-10  Score=69.08  Aligned_cols=73  Identities=18%  Similarity=0.153  Sum_probs=58.6

Q ss_pred             ceecCCCCCeeecC----CCccceeeeEEECCCCeEEEEcCCCCC------CCCCeEEEEeCCCCcEEec--cCCCCCCC
Q psy6079           3 SSICLHLVFWFPLL----LLSYMCLGVGVLEPEGPLYAVGGHDGW------SYLNTTERFDPRLRQWSFI--APMLSPRS   70 (79)
Q Consensus         3 ~~~~~~~~~W~~~~----~~~r~~~~~~~~~~~~~iyv~GG~~~~------~~~~~~~~yd~~~~~W~~~--~~~~~~r~   70 (79)
                      .+||.++++|..+.    |.||..|.+++++ .+.+|++||--..      ....++|.||..+++|+++  +.-|.+|+
T Consensus       101 y~Yn~k~~eWkk~~spn~P~pRsshq~va~~-s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~trkweql~~~g~PS~RS  179 (521)
T KOG1230|consen  101 YSYNTKKNEWKKVVSPNAPPPRSSHQAVAVP-SNILWLFGGEFASPNQEQFHHYKDLWLFDLKTRKWEQLEFGGGPSPRS  179 (521)
T ss_pred             eEEeccccceeEeccCCCcCCCccceeEEec-cCeEEEeccccCCcchhhhhhhhheeeeeeccchheeeccCCCCCCCc
Confidence            37899999999985    6779888888874 4799999993211      1378999999999999998  45689999


Q ss_pred             ceeEEE
Q psy6079          71 TAGVAV   76 (79)
Q Consensus        71 ~~~~~~   76 (79)
                      +|-.++
T Consensus       180 GHRMva  185 (521)
T KOG1230|consen  180 GHRMVA  185 (521)
T ss_pred             cceeEE
Confidence            997665

>KOG4152|consensus

Probab=99.03  E-value=7.1e-10  Score=70.27  Aligned_cols=72  Identities=11%  Similarity=0.170  Sum_probs=58.4

Q ss_pred             ecCCCCCeeecC-----CCccceeeeEEECCCCeEEEEcCCC------------CC--CCCCeEEEEeCCCCcEEecc--
Q psy6079           5 ICLHLVFWFPLL-----LLSYMCLGVGVLEPEGPLYAVGGHD------------GW--SYLNTTERFDPRLRQWSFIA--   63 (79)
Q Consensus         5 ~~~~~~~W~~~~-----~~~r~~~~~~~~~~~~~iyv~GG~~------------~~--~~~~~~~~yd~~~~~W~~~~--   63 (79)
                      .|++|..|.+..     ||||.-|++.++  ++++|||||.-            +.  ...+++.++|..+..|+.+-  
T Consensus       235 Ldl~Tl~W~kp~~~G~~PlPRSLHsa~~I--GnKMyvfGGWVPl~~~~~~~~~hekEWkCTssl~clNldt~~W~tl~~d  312 (830)
T KOG4152|consen  235 LDLDTLTWNKPSLSGVAPLPRSLHSATTI--GNKMYVFGGWVPLVMDDVKVATHEKEWKCTSSLACLNLDTMAWETLLMD  312 (830)
T ss_pred             EecceeecccccccCCCCCCcccccceee--cceeEEecceeeeeccccccccccceeeeccceeeeeecchheeeeeec
Confidence            477888898764     999999999999  99999999941            11  12678889999999999872  


Q ss_pred             -----CCCCCCCceeEEEEC
Q psy6079          64 -----PMLSPRSTAGVAVLN   78 (79)
Q Consensus        64 -----~~~~~r~~~~~~~~~   78 (79)
                           ..|.+|.+|++++++
T Consensus       313 ~~ed~tiPR~RAGHCAvAig  332 (830)
T KOG4152|consen  313 TLEDNTIPRARAGHCAVAIG  332 (830)
T ss_pred             cccccccccccccceeEEec
Confidence                 368899999998875

>COG3055 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.82  E-value=1.7e-08  Score=61.37  Aligned_cols=67  Identities=22%  Similarity=0.296  Sum_probs=50.4

Q ss_pred             CCeeecCCCc---cceeeeEEECCCCeEEEEcCCCCCC-----CCCeEEEEeCCCCcEEeccCC-CCCCCceeEEEEC
Q psy6079          10 VFWFPLLLLS---YMCLGVGVLEPEGPLYAVGGHDGWS-----YLNTTERFDPRLRQWSFIAPM-LSPRSTAGVAVLN   78 (79)
Q Consensus        10 ~~W~~~~~~~---r~~~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~~~   78 (79)
                      ..|+.++..|   |.+...+++  +++||+|||.....     .++++++|||.+++|+++... |+.-..+.++.++
T Consensus        70 k~W~~~a~FpG~~rnqa~~a~~--~~kLyvFgG~Gk~~~~~~~~~nd~Y~y~p~~nsW~kl~t~sP~gl~G~~~~~~~  145 (381)
T COG3055          70 KGWTKIADFPGGARNQAVAAVI--GGKLYVFGGYGKSVSSSPQVFNDAYRYDPSTNSWHKLDTRSPTGLVGASTFSLN  145 (381)
T ss_pred             CCceEcccCCCcccccchheee--CCeEEEeeccccCCCCCceEeeeeEEecCCCChhheeccccccccccceeEecC
Confidence            5899998544   899999999  99999999965322     278999999999999998543 3343444555544

>COG3055 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.43  E-value=4e-07  Score=55.54  Aligned_cols=70  Identities=17%  Similarity=0.195  Sum_probs=50.7

Q ss_pred             ceecCCCCCeeecC-CCcc--ceeeeEEECCCC-eEEEEcCCCCC----------------------------------C
Q psy6079           3 SSICLHLVFWFPLL-LLSY--MCLGVGVLEPEG-PLYAVGGHDGW----------------------------------S   44 (79)
Q Consensus         3 ~~~~~~~~~W~~~~-~~~r--~~~~~~~~~~~~-~iyv~GG~~~~----------------------------------~   44 (79)
                      ++|||.+|+|.++. ..|+  .++.++.+  ++ +||++||++..                                  .
T Consensus       116 Y~y~p~~nsW~kl~t~sP~gl~G~~~~~~--~~~~i~f~GGvn~~if~~yf~dv~~a~~d~~~~~~i~~~yf~~~~~dy~  193 (381)
T COG3055         116 YRYDPSTNSWHKLDTRSPTGLVGASTFSL--NGTKIYFFGGVNQNIFNGYFEDVGAAGKDKEAVDKIIAHYFDKKAEDYF  193 (381)
T ss_pred             EEecCCCChhheeccccccccccceeEec--CCceEEEEccccHHhhhhhHHhhhhhcccHHHHHHHHHHHhCCCHHHhc
Confidence            58999999999998 3344  56666666  77 99999996321                                  0


Q ss_pred             CCCeEEEEeCCCCcEEeccCCC-CCCCceeE
Q psy6079          45 YLNTTERFDPRLRQWSFIAPML-SPRSTAGV   74 (79)
Q Consensus        45 ~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~   74 (79)
                      ....+..|+|.+++|+.....| .+++..+.
T Consensus       194 ~n~ev~sy~p~~n~W~~~G~~pf~~~aGsa~  224 (381)
T COG3055         194 FNKEVLSYDPSTNQWRNLGENPFYGNAGSAV  224 (381)
T ss_pred             ccccccccccccchhhhcCcCcccCccCcce
Confidence            1356778999999999997555 56665433

>KOG4152|consensus

Probab=98.09  E-value=5.3e-06  Score=53.30  Aligned_cols=64  Identities=11%  Similarity=0.135  Sum_probs=49.5

Q ss_pred             CCeeecC------CCccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEec---cCCCCCCCceeEEE
Q psy6079          10 VFWFPLL------LLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFI---APMLSPRSTAGVAV   76 (79)
Q Consensus        10 ~~W~~~~------~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~~~~r~~~~~~~   76 (79)
                      -+|.++.      |-||.+|.++++  .+.|.||||-++. ...++++||..+++|..-   .++|.+...|+++.
T Consensus        17 ~rWrrV~~~tGPvPrpRHGHRAVai--kELiviFGGGNEG-iiDELHvYNTatnqWf~PavrGDiPpgcAA~Gfvc   89 (830)
T KOG4152|consen   17 VRWRRVQQSTGPVPRPRHGHRAVAI--KELIVIFGGGNEG-IIDELHVYNTATNQWFAPAVRGDIPPGCAAFGFVC   89 (830)
T ss_pred             cceEEEecccCCCCCccccchheee--eeeEEEecCCccc-chhhhhhhccccceeecchhcCCCCCchhhcceEe
Confidence            4788875      445799999999  9999999986543 468899999999999864   45666666666654

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=98.00  E-value=4.2e-05  Score=45.00  Aligned_cols=74  Identities=20%  Similarity=0.231  Sum_probs=54.4

Q ss_pred             ceecCCCCCeeecCCCccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCC----CcEEecc-CCCCCCCceeEEEE
Q psy6079           3 SSICLHLVFWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRL----RQWSFIA-PMLSPRSTAGVAVL   77 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~-~~~~~r~~~~~~~~   77 (79)
                      ..||+.+++++.+....-..++..++-.++.+.++||..+.  ...+..|++.+    ..|...+ .|..+|..+++..+
T Consensus        49 ~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G--~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L  126 (243)
T PF07250_consen   49 VEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDG--NKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTL  126 (243)
T ss_pred             EEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCcc--ccceEEEecCCCCCCCCceECcccccCCCccccceEC
Confidence            57999999999987544333333333348899999997652  45678888876    6798775 58999999988876


Q ss_pred             C
Q psy6079          78 N   78 (79)
Q Consensus        78 ~   78 (79)
                      .
T Consensus       127 ~  127 (243)
T PF07250_consen  127 P  127 (243)
T ss_pred             C
Confidence            4

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>smart00612 Kelch Kelch domain

Probab=97.82  E-value=2.7e-05  Score=33.86  Aligned_cols=26  Identities=23%  Similarity=0.240  Sum_probs=20.9

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEE
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVL   28 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~   28 (79)
                      .+||+.+++|+.+++|+  |..++++++
T Consensus        18 ~~yd~~~~~W~~~~~~~~~r~~~~~~~~   45 (47)
T smart00612       18 EVYDPETNKWTPLPSMPTPRSGHGVAVI   45 (47)
T ss_pred             EEECCCCCeEccCCCCCCccccceEEEe
Confidence            47999999999999776  666666665

>KOG2437|consensus

Probab=97.53  E-value=9.5e-05  Score=47.61  Aligned_cols=66  Identities=18%  Similarity=0.154  Sum_probs=51.0

Q ss_pred             CCCeeecCC------------CccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEecc---CCCCCCCcee
Q psy6079           9 LVFWFPLLL------------LSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIA---PMLSPRSTAG   73 (79)
Q Consensus         9 ~~~W~~~~~------------~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~   73 (79)
                      +.+|++.++            -.|.+|-++....++.+|+-||.++...+.++|.|+...++|..+.   ..|..|..|-
T Consensus       238 ~~~W~~i~~~~~~~~~~~~~p~~RgGHQMV~~~~~~CiYLYGGWdG~~~l~DFW~Y~v~e~~W~~iN~~t~~PG~RsCHR  317 (723)
T KOG2437|consen  238 KPRWSQIIPKSTKGDGEDNRPGMRGGHQMVIDVQTECVYLYGGWDGTQDLADFWAYSVKENQWTCINRDTEGPGARSCHR  317 (723)
T ss_pred             cccccccCchhhcccccccCccccCcceEEEeCCCcEEEEecCcccchhHHHHHhhcCCcceeEEeecCCCCCcchhhhh
Confidence            567887652            2378888888744558999999999888999999999999999873   3566777664


Q ss_pred             E
Q psy6079          74 V   74 (79)
Q Consensus        74 ~   74 (79)
                      .
T Consensus       318 M  318 (723)
T KOG2437|consen  318 M  318 (723)
T ss_pred             h
Confidence            4

>PF13415 Kelch_3: Galactose oxidase, central domain

Probab=97.28  E-value=0.00035  Score=31.07  Aligned_cols=26  Identities=12%  Similarity=-0.068  Sum_probs=20.7

Q ss_pred             ceecCCCCCeeecC--CCccceeeeEEE
Q psy6079           3 SSICLHLVFWFPLL--LLSYMCLGVGVL   28 (79)
Q Consensus         3 ~~~~~~~~~W~~~~--~~~r~~~~~~~~   28 (79)
                      ..||+.+++|++++  |.+|.+|+++++
T Consensus        22 ~~~~~~~~~W~~~~~~P~~R~~h~~~~i   49 (49)
T PF13415_consen   22 WVFDLDTNTWTRIGDLPPPRSGHTATVI   49 (49)
T ss_pred             EEEECCCCEEEECCCCCCCccceEEEEC
Confidence            47999999999998  445888887763

>KOG2437|consensus

Probab=97.12  E-value=0.00093  Score=43.26  Aligned_cols=58  Identities=14%  Similarity=0.180  Sum_probs=44.6

Q ss_pred             eecCCCCCeeecC--------CCccceeeeEEECCCCe--EEEEcCCCC--C-CCCCeEEEEeCCCCcEEecc
Q psy6079           4 SICLHLVFWFPLL--------LLSYMCLGVGVLEPEGP--LYAVGGHDG--W-SYLNTTERFDPRLRQWSFIA   63 (79)
Q Consensus         4 ~~~~~~~~W~~~~--------~~~r~~~~~~~~~~~~~--iyv~GG~~~--~-~~~~~~~~yd~~~~~W~~~~   63 (79)
                      +||..++.|..+.        |-....|.+++.  .++  +||+||+.-  . ..+..++.||..-..|+...
T Consensus       350 ~FDi~~~~W~~ls~dt~~dGGP~~vfDHqM~Vd--~~k~~iyVfGGr~~~~~e~~f~GLYaf~~~~~~w~~l~  420 (723)
T KOG2437|consen  350 RFDIDTNTWMLLSEDTAADGGPKLVFDHQMCVD--SEKHMIYVFGGRILTCNEPQFSGLYAFNCQCQTWKLLR  420 (723)
T ss_pred             EEecCCceeEEecccccccCCcceeecceeeEe--cCcceEEEecCeeccCCCccccceEEEecCCccHHHHH
Confidence            5788899998886        222467888888  666  999999652  2 34788999999999998764

>PF13964 Kelch_6: Kelch motif

Probab=96.97  E-value=0.00064  Score=30.25  Aligned_cols=18  Identities=11%  Similarity=-0.011  Sum_probs=15.9

Q ss_pred             ceecCCCCCeeecCCCcc
Q psy6079           3 SSICLHLVFWFPLLLLSY   20 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~r   20 (79)
                      .+||+++++|+.+++||.
T Consensus        31 ~~yd~~t~~W~~~~~mp~   48 (50)
T PF13964_consen   31 ERYDPETNTWEQLPPMPT   48 (50)
T ss_pred             EEEcCCCCcEEECCCCCC
Confidence            589999999999998873

>PLN02772 guanylate kinase

Probab=96.97  E-value=0.0046  Score=38.96  Aligned_cols=51  Identities=6%  Similarity=-0.052  Sum_probs=37.1

Q ss_pred             ceecCCCCCeeecC-----CCccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCC
Q psy6079           3 SSICLHLVFWFPLL-----LLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRL   56 (79)
Q Consensus         3 ~~~~~~~~~W~~~~-----~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~   56 (79)
                      +.||..+++|....     |.||.+|+++++. +++|+|+++....  ..++|.....|
T Consensus        54 ~i~D~~t~~W~~P~V~G~~P~~r~GhSa~v~~-~~rilv~~~~~~~--~~~~w~l~~~t  109 (398)
T PLN02772         54 QILDKITNNWVSPIVLGTGPKPCKGYSAVVLN-KDRILVIKKGSAP--DDSIWFLEVDT  109 (398)
T ss_pred             EEEECCCCcEecccccCCCCCCCCcceEEEEC-CceEEEEeCCCCC--ccceEEEEcCC
Confidence            46899999999875     7779999999883 5689999764332  25566555444

>TIGR01640 F_box_assoc_1 F-box protein interaction domain

Probab=96.43  E-value=0.048  Score=31.54  Aligned_cols=59  Identities=14%  Similarity=-0.013  Sum_probs=39.1

Q ss_pred             ceecCCCCCeeecCCCc---cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEe-cc
Q psy6079           3 SSICLHLVFWFPLLLLS---YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSF-IA   63 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~---r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~   63 (79)
                      ..|+..++.|..+...+   ......+.+  ++.+|-+...........+..||..+.+|.. ++
T Consensus        73 ~Vys~~~~~Wr~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~IvsFDl~~E~f~~~i~  135 (230)
T TIGR01640        73 QVYTLGSNSWRTIECSPPHHPLKSRGVCI--NGVLYYLAYTLKTNPDYFIVSFDVSSERFKEFIP  135 (230)
T ss_pred             EEEEeCCCCccccccCCCCccccCCeEEE--CCEEEEEEEECCCCCcEEEEEEEcccceEeeeee
Confidence            47888999999987322   111225667  9998887642221112268999999999995 53

This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain.

>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []

Probab=96.38  E-value=0.001  Score=29.01  Aligned_cols=17  Identities=12%  Similarity=0.004  Sum_probs=15.0

Q ss_pred             ceecCCCCCeeecCCCc
Q psy6079           3 SSICLHLVFWFPLLLLS   19 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~   19 (79)
                      .+||+++++|+.+++||
T Consensus        31 ~~yd~~~~~W~~~~~mp   47 (47)
T PF01344_consen   31 EVYDPETNTWEELPPMP   47 (47)
T ss_dssp             EEEETTTTEEEEEEEES
T ss_pred             EEEeCCCCEEEEcCCCC
Confidence            47999999999998875

This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....

>TIGR01640 F_box_assoc_1 F-box protein interaction domain

Probab=95.92  E-value=0.15  Score=29.50  Aligned_cols=62  Identities=8%  Similarity=-0.122  Sum_probs=35.9

Q ss_pred             ceecCCCCCeeecCCCcc----ceeeeEEECCCC-----eEEEEcCCCCCCCCCeEEEEeCCCCcEEeccC
Q psy6079           3 SSICLHLVFWFPLLLLSY----MCLGVGVLEPEG-----PLYAVGGHDGWSYLNTTERFDPRLRQWSFIAP   64 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~r----~~~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~   64 (79)
                      ...||.|.+|..+|+.+.    .......+.++.     |+..+...........+++|+..++.|+.+..
T Consensus        17 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~G~d~~~~~YKVv~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~   87 (230)
T TIGR01640        17 VVWNPSTGQSRWLPTPKSRRSNKESDTYFLGYDPIEKQYKVLCFSDRSGNRNQSEHQVYTLGSNSWRTIEC   87 (230)
T ss_pred             EEECCCCCCEEecCCCCCcccccccceEEEeecccCCcEEEEEEEeecCCCCCccEEEEEeCCCCcccccc
Confidence            367999999999974331    111011121122     44444332111124578999999999999864

This model describes a large family of plant domains, with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646), a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain.

>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B

Probab=95.83  E-value=0.0058  Score=26.91  Aligned_cols=17  Identities=12%  Similarity=0.082  Sum_probs=12.4

Q ss_pred             ceecCCCCCeeecCCCc
Q psy6079           3 SSICLHLVFWFPLLLLS   19 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~   19 (79)
                      .+||+++++|++++++|
T Consensus        32 ~~~d~~~~~W~~~~~~P   48 (49)
T PF13418_consen   32 WIFDIETNTWTRLPSMP   48 (49)
T ss_dssp             EEEETTTTEEEE--SS-
T ss_pred             EEEECCCCEEEECCCCC
Confidence            47999999999998776

>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []

Probab=95.37  E-value=0.013  Score=25.90  Aligned_cols=17  Identities=12%  Similarity=0.018  Sum_probs=14.8

Q ss_pred             ceecCCCCCeeecCCCc
Q psy6079           3 SSICLHLVFWFPLLLLS   19 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~   19 (79)
                      +.||+++++|+.+++++
T Consensus        33 ~~~d~~t~~W~~~~~~g   49 (49)
T PF07646_consen   33 WVFDTETNQWTELSPMG   49 (49)
T ss_pred             EEEECCCCEEeecCCCC
Confidence            57999999999998775

This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=95.19  E-value=0.16  Score=30.87  Aligned_cols=60  Identities=12%  Similarity=-0.008  Sum_probs=39.3

Q ss_pred             eecCCCCCeeecCCC-ccceeeeEEECCCCeEEEEcCCCCCC-CCCeEEEEeCCCCcEEeccC
Q psy6079           4 SICLHLVFWFPLLLL-SYMCLGVGVLEPEGPLYAVGGHDGWS-YLNTTERFDPRLRQWSFIAP   64 (79)
Q Consensus         4 ~~~~~~~~W~~~~~~-~r~~~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~   64 (79)
                      .||+...+|..+..- .-.-..+... -++++|+.|-+.-.. ....+..||.++.+|..++.
T Consensus        20 ~yd~~~~qW~~~g~~i~G~V~~l~~~-~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~   81 (281)
T PF12768_consen   20 LYDTDNSQWSSPGNGISGTVTDLQWA-SNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGG   81 (281)
T ss_pred             EEECCCCEeecCCCCceEEEEEEEEe-cCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCC
Confidence            589999999998732 1111222222 256777777544333 35678999999999988865

>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function

Probab=89.88  E-value=3.3  Score=25.82  Aligned_cols=36  Identities=14%  Similarity=-0.101  Sum_probs=24.8

Q ss_pred             eecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCC
Q psy6079           4 SICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHD   41 (79)
Q Consensus         4 ~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~   41 (79)
                      .||+++..-..+|.+.  .....++.+  +++||++....
T Consensus        90 vyDt~t~av~~~P~l~~pk~~pisv~V--G~~LY~m~~~~  127 (342)
T PF07893_consen   90 VYDTDTRAVATGPRLHSPKRCPISVSV--GDKLYAMDRSP  127 (342)
T ss_pred             EEECCCCeEeccCCCCCCCcceEEEEe--CCeEEEeeccC
Confidence            5888888877777554  233345556  88999997643

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=88.51  E-value=0.95  Score=27.03  Aligned_cols=34  Identities=18%  Similarity=0.401  Sum_probs=26.2

Q ss_pred             CCCeEEEEcCCCCCCCCCeEEEEeCCCCcE-EeccCCCC-CCC
Q psy6079          30 PEGPLYAVGGHDGWSYLNTTERFDPRLRQW-SFIAPMLS-PRS   70 (79)
Q Consensus        30 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~~~-~r~   70 (79)
                      .+++||+++.       ....+||+.++++ ..+|.+|. +|.
T Consensus       179 PdG~lFi~an-------~~s~i~d~~~n~v~~~lP~lPg~~R~  214 (243)
T PF07250_consen  179 PDGNLFIFAN-------RGSIIYDYKTNTVVRTLPDLPGGPRN  214 (243)
T ss_pred             CCCCEEEEEc-------CCcEEEeCCCCeEEeeCCCCCCCcee
Confidence            4999999975       3457789999987 77888884 454

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=85.37  E-value=5.8  Score=24.69  Aligned_cols=55  Identities=13%  Similarity=0.173  Sum_probs=33.6

Q ss_pred             ceecCCCCCeeecC--CCccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEecc
Q psy6079           3 SSICLHLVFWFPLL--LLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIA   63 (79)
Q Consensus         3 ~~~~~~~~~W~~~~--~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~   63 (79)
                      ++|||....|..-+  ...-..+++.+-. .+.+++-     ....+.+.+|||++.+...++
T Consensus       257 ~rfdPs~~sW~eypLPgs~arpys~rVD~-~grVW~s-----ea~agai~rfdpeta~ftv~p  313 (353)
T COG4257         257 HRFDPSVTSWIEYPLPGSKARPYSMRVDR-HGRVWLS-----EADAGAIGRFDPETARFTVLP  313 (353)
T ss_pred             eEeCcccccceeeeCCCCCCCcceeeecc-CCcEEee-----ccccCceeecCcccceEEEec
Confidence            68999999998754  2222233444331 3345542     112467889999998877663

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=81.01  E-value=3.1  Score=17.18  Aligned_cols=37  Identities=16%  Similarity=0.074  Sum_probs=18.5

Q ss_pred             CeeecCCCccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCC
Q psy6079          11 FWFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRL   56 (79)
Q Consensus        11 ~W~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~   56 (79)
                      .|+.-.+- ....+.++.  ++.+|+.+.      ...++++|+++
T Consensus         4 ~W~~~~~~-~~~~~~~v~--~g~vyv~~~------dg~l~ald~~t   40 (40)
T PF13570_consen    4 LWSYDTGG-PIWSSPAVA--GGRVYVGTG------DGNLYALDAAT   40 (40)
T ss_dssp             EEEEE-SS----S--EEC--TSEEEEE-T------TSEEEEEETT-
T ss_pred             eEEEECCC-CcCcCCEEE--CCEEEEEcC------CCEEEEEeCCC
Confidence            46664322 222334455  778887654      35788888764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	79
2vpj_A	301	Crystal Structure Of The Kelch Domain Of Human Klhl		2e-09
3vng_A	309	Crystal Structure Of Keap1 In Complex With Syntheti		7e-09
1u6d_X	308	Crystal Structure Of The Kelch Domain Of Human Keap		7e-09
2dyh_A	318	Crystal Structure Of The Keap1 Protein In Complexed		2e-08
1x2j_A	316	Structural Basis For The Defects Of Human Lung Canc		2e-08
1zgk_A	308	1.35 Angstrom Structure Of The Kelch Domain Of Keap		4e-08
2xn4_A	302	Crystal Structure Of The Kelch Domain Of Human Klhl		2e-05

>pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12 Length = 301

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
           G G++   G +Y +GG+DG + LN+ E++DP    W+ + PM + RS AGVA+LN 
Sbjct: 152 GAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLND 207

>pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small Molecular Based On A Co-crystallization Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 23  LGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           +GVGV++  G +YAVGG  G  + N+ ER++P   +W  +APML+ R   GVAVLN
Sbjct: 116 IGVGVID--GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 169

>pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1 Length = 308

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 23  LGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           +GVGV++  G +YAVGG  G  + N+ ER++P   +W  +APML+ R   GVAVLN
Sbjct: 115 IGVGVID--GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168

>pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With The N-Terminal Region Of The Nrf2 Transcription Factor Length = 318

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 23  LGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           +GVGV++  G +YAVGG  G  + ++ ER++P   +W  +APML+ R   GVAVLN
Sbjct: 109 IGVGVID--GHIYAVGGSHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 162

>pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer Somatic Mutations In The Repression Activity Of Keap1 On Nrf2 Length = 316

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 23  LGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           +GVGV++  G +YAVGG  G  + ++ ER++P   +W  +APML+ R   GVAVLN
Sbjct: 108 IGVGVID--GHIYAVGGSHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 161

>pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1 Length = 308

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 23  LGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           +GVGV++  G +YAVGG  G  + N+ ER++P   +W  +AP L+ R   GVAVLN
Sbjct: 115 IGVGVID--GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPXLTRRIGVGVAVLN 168

>pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2 (mayven) Length = 302

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 21  MCL-GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSP-RSTAGVAVLN 78
           MC    GV    G LY VGG DG   L + E ++P   +W+ ++  +S  RS AGV V++
Sbjct: 240 MCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVID 299
Query: 79  S 79
Sbjct: 300 K 300

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	79
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	2e-22
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	4e-19
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	2e-17
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	2e-17
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	6e-14
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	5e-12
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	8e-22
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	8e-20
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	5e-19
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	2e-16
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	7e-15
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	6e-12
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	2e-21
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	5e-19
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	2e-18
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	6e-15
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	9e-15
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	7e-12
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	2e-19
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	2e-18
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	5e-17
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	1e-15
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	8e-14
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	3e-10
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	2e-19
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	6e-19
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	4e-18
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	2e-13
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	6e-11
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	1e-06
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	1e-18
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	5e-18
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	1e-17
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	4e-13
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	1e-10
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	2e-06
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	4e-09
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	7e-08
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	2e-05
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	5e-04
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	9e-05
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	2e-04

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302

 Score = 86.6 bits (215), Expect = 2e-22
 Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
            LG  VL   G LYAVGG DG + L++ E ++ +  +W  +APM + RS+ GV V+ 
Sbjct: 101 TLGAAVLN--GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVG 155

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302

 Score = 77.7 bits (192), Expect = 4e-19
 Identities = 25/57 (43%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             GVGVL     LYAVGGHDG     + E +DP    W  +A M   R  AGV  +N
Sbjct: 197 GAGVGVLN--NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVN 251

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302

 Score = 73.1 bits (180), Expect = 2e-17
 Identities = 24/67 (35%), Positives = 35/67 (52%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRST 71
           W  +  L       G++   G ++AVGG +G   + T + +DP   QW+ +A M   RST
Sbjct: 42  WHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST 101

Query: 72  AGVAVLN 78
            G AVLN
Sbjct: 102 LGAAVLN 108

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302

 Score = 73.1 bits (180), Expect = 2e-17
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWS--YLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
            +GVGV+   G LYAVGG+D  S   L+T E ++    +W++IA M + RS AGV VLN
Sbjct: 148 SVGVGVVG--GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLN 204

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302

 Score = 63.4 bits (155), Expect = 6e-14
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 21  MCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAP-MLSPRSTAGVAVLN 78
              GV  +   G LY VGG DG   L + E ++P   +W+ ++  M + RS AGV V++
Sbjct: 243 RNAGVCAVN--GLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVID 299

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Length = 302

 Score = 58.1 bits (141), Expect = 5e-12
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 34 LYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
          L  V G      + + E +D +  +W  +A + S R  AG+  + 
Sbjct: 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMA 61

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301

 Score = 84.6 bits (210), Expect = 8e-22
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 21  MCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
              G   L     +Y  GG DG     + ER+DP + QWS +  M + R  AG+ V +
Sbjct: 104 GLAGATTLG--DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS 159

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301

 Score = 79.3 bits (196), Expect = 8e-20
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             G+ V    G +Y +GG+DG + LN+ E++DP    W+ + PM + RS AGVA+LN
Sbjct: 152 GAGLVVAS--GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLN 206

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301

 Score = 76.9 bits (190), Expect = 5e-19
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             GV +L     +Y VGG DG ++L++ E ++ R   W+ +  M +PR   G  VL 
Sbjct: 199 GAGVALLN--DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLR 253

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301

 Score = 70.4 bits (173), Expect = 2e-16
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 21  MCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             +G  VL   G LYA+ G+DG S L++ E +DP +  W  +  M + R  AGV VL 
Sbjct: 245 CYVGATVLR--GRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301

 Score = 66.2 bits (162), Expect = 7e-15
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQ---WSFIAPMLSP 68
           W  L  ++     V  +     +Y +GG+DG S L++ E  D    +   W  +APM   
Sbjct: 43  WSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR 102

Query: 69  RSTAGVAVLN 78
           R  AG   L 
Sbjct: 103 RGLAGATTLG 112

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Length = 301

 Score = 58.1 bits (141), Expect = 6e-12
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 28 LEPEGPLYAVGGHDG-WSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
          L     L  VGG     S ++  E++DP+ ++WSF+  +   R       L+
Sbjct: 11 LGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLH 62

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308

 Score = 83.5 bits (207), Expect = 2e-21
 Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
            +GVGV++  G +YAVGG  G  + N+ ER++P   +W  +APML+ R   GVAVLN
Sbjct: 114 RIGVGVID--GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308

 Score = 77.0 bits (190), Expect = 5e-19
 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
            +GV VL     LYAVGG DG + LN+ E + P   +W  I  M + RS AGV VL+
Sbjct: 161 GVGVAVLN--RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLH 215

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308

 Score = 75.4 bits (186), Expect = 2e-18
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             GV VL     +YA GG+DG   LN+ ER+D     W+F+APM   RS  G+ V  
Sbjct: 208 GAGVCVLH--NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQ 262

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308

 Score = 66.2 bits (162), Expect = 6e-15
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGH----DGWSYLNTTERFDPRLRQWSFIAPMLS 67
           W  L  L     G+      G LYAVGG     DG +  +  + ++P   QWS  APM  
Sbjct: 51  WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV 110

Query: 68  PRSTAGVAVLN 78
           PR+  GV V++
Sbjct: 111 PRNRIGVGVID 121

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308

 Score = 65.8 bits (161), Expect = 9e-15
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAV 76
            +G+   +G +Y +GG+DG ++L++ E +DP    WS +  M S RS  GVAV
Sbjct: 255 ALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 307

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Length = 308

 Score = 57.7 bits (140), Expect = 7e-12
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 34 LYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
          +Y  GG+     L+  E ++P    W  +A +  PRS     V+ 
Sbjct: 27 IYTAGGYFR-QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVG 70

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306

 Score = 78.1 bits (193), Expect = 2e-19
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 22  CLGVGVLEPEGPLYAVGGHD-GWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
            L     E  G +Y  GG + G S L   E +D R   W     ML+ R + G+   N
Sbjct: 94  SLAACAAE--GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEAN 149

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306

 Score = 75.4 bits (186), Expect = 2e-18
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             G+  ++    ++AVGG +G   L+  E +D +L +W  ++PM     T   A + 
Sbjct: 193 NHGLVFVK--DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVG 247

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306

 Score = 72.0 bits (177), Expect = 5e-17
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 21  MCLGVGVLEPEGPLYAVGGHDGWS----YLNTTERFDPRLRQWSFIAPMLSPRSTAGVAV 76
              G+      G +Y  GG  G +     LN+ E +DP    W+ + PM+  R   G+  
Sbjct: 141 CSHGMVEAN--GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVF 198

Query: 77  LN 78
           + 
Sbjct: 199 VK 200

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306

 Score = 68.1 bits (167), Expect = 1e-15
 Identities = 7/67 (10%), Positives = 18/67 (26%), Gaps = 1/67 (1%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRST 71
           W  +            +  +  +Y +GG      +   + ++     W       +PR +
Sbjct: 36  WTDIRCPFEKRRDAACVFWDNVVYILGGSQL-FPIKRMDCYNVVKDSWYSKLGPPTPRDS 94

Query: 72  AGVAVLN 78
                  
Sbjct: 95  LAACAAE 101

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306

 Score = 63.1 bits (154), Expect = 8e-14
 Identities = 6/60 (10%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 21  MCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPR-STAGVAVLNS 79
           + +    +     +Y + G  G   L     ++    +W   + + +   ++  + V+++
Sbjct: 239 VTVKCAAVG--SIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVDT 296

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Length = 306

 Score = 53.5 bits (129), Expect = 3e-10
 Identities = 9/48 (18%), Positives = 16/48 (33%), Gaps = 4/48 (8%)

Query: 31 EGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
          +  +   GG    S   +   F+P+   W+ I      R  A     +
Sbjct: 12 DYRIALFGG----SQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWD 55

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318

 Score = 78.2 bits (193), Expect = 2e-19
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 21  MCLGVGVLEPEGPLYAVGGH-DGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
               V      G +Y +GG  D     N    ++P+   W  +APM +PRS  GVA+  
Sbjct: 150 YGHNVISHN--GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHK 206

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318

 Score = 77.0 bits (190), Expect = 6e-19
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 22  CLGVGVLEPEGPLYAVGGHD--GWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             G+G ++    +Y V G D    + L++   +DP   +WS +  +        V   N
Sbjct: 102 LFGLGEVD--DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN 158

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318

 Score = 75.1 bits (185), Expect = 4e-18
 Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             GV + +  G +   GG        + E FD +  +W  +      RS+  +  L 
Sbjct: 199 MFGVAIHK--GKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLA 253

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318

 Score = 62.0 bits (151), Expect = 2e-13
 Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 6/73 (8%)

Query: 12  WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDG------WSYLNTTERFDPRLRQWSFIAPM 65
           +   L          ++  +  +Y VGG             +   + D    +W  + P+
Sbjct: 37  YLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL 96

Query: 66  LSPRSTAGVAVLN 78
            S R   G+  ++
Sbjct: 97  PSARCLFGLGEVD 109

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318

 Score = 55.0 bits (133), Expect = 6e-11
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 13/67 (19%)

Query: 21  MCLGVGVLEPEGPLYAVGGHDG---------WSYLNTTERFDPRLRQWSFIAPMLSPRST 71
             + +  L   G LYA+GG             + +N   +++   ++W+ +      R  
Sbjct: 245 SSISLVSLA--GSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKE--IRYA 300

Query: 72  AGVAVLN 78
           +G + L 
Sbjct: 301 SGASCLA 307

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Length = 318

 Score = 43.1 bits (102), Expect = 1e-06
 Identities = 6/49 (12%), Positives = 13/49 (26%), Gaps = 8/49 (16%)

Query: 31 EGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIA-PMLSPRSTAGVAVLN 78
          +  +  V              +DP   +    A     PR+ + +    
Sbjct: 15 KDLILLVND-------TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQ 56

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315

 Score = 76.3 bits (188), Expect = 1e-18
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 21  MCLGVGVLEPEGPLYAVGGH-DGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
               V        +Y +GG       LN    +DP+  +W  +APM + RS  G  V +
Sbjct: 140 YGHTVLSHM--DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHD 196

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315

 Score = 74.7 bits (184), Expect = 5e-18
 Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 5/59 (8%)

Query: 23  LGVGVLEPEGPLYAVGGH---DGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
            G+G       +Y VGG    DG   L++   +D    +W    P+        V    
Sbjct: 92  FGLGEAL--NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM 148

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315

 Score = 73.9 bits (182), Expect = 1e-17
 Identities = 9/57 (15%), Positives = 18/57 (31%), Gaps = 2/57 (3%)

Query: 22  CLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
             G  V +  G +    G       ++ E +     +W+        RS+  +  L 
Sbjct: 189 LFGATVHD--GRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLV 243

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315

 Score = 61.2 bits (149), Expect = 4e-13
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 6/73 (8%)

Query: 12 WFPLLLLSYMCLGVGVLEPEGPLYAVGGHDGWSYLNTT------ERFDPRLRQWSFIAPM 65
          +   L        V ++  E  ++  GG                 +FD    +W  + P+
Sbjct: 26 YCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85

Query: 66 LSPRSTAGVAVLN 78
           SPR   G+    
Sbjct: 86 PSPRCLFGLGEAL 98

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315

 Score = 54.3 bits (131), Expect = 1e-10
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 13/67 (19%)

Query: 21  MCLGVGVLEPEGPLYAVGGHDGW---------SYLNTTERFDPRLRQWSFIAPMLSPRST 71
             L +  L   G LYA+GG             + LN   R++   ++W  +         
Sbjct: 235 SSLSLVSLV--GTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLRE--IAYA 290

Query: 72  AGVAVLN 78
           AG   L 
Sbjct: 291 AGATFLP 297

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Length = 315

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 3/49 (6%), Positives = 12/49 (24%), Gaps = 8/49 (16%)

Query: 31 EGPLYAVGGHDGWSYLNTTERFDPRLRQWSFI-APMLSPRSTAGVAVLN 78
          +  ++ +              +DP   +          P++   +    
Sbjct: 4  QDLIFMISE-------EGAVAYDPAANECYCASLSSQVPKNHVSLVTKE 45

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357

 Score = 49.9 bits (119), Expect = 4e-09
 Identities = 7/53 (13%), Positives = 14/53 (26%)

Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAV 76
           G       G  Y  GG +   +    E  +   +  + I  + +         
Sbjct: 111 GHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357

 Score = 46.5 bits (110), Expect = 7e-08
 Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 6/55 (10%)

Query: 31  EGPLYAVGGHD-----GWSYLNTTERFDPRLRQWSFIAPML-SPRSTAGVAVLNS 79
           +G LY  GG            N   +++P+   W  +        +     V N 
Sbjct: 65  DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNG 119

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357

 Score = 39.9 bits (93), Expect = 2e-05
 Identities = 6/39 (15%), Positives = 12/39 (30%)

Query: 40  HDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN 78
           H+G     +T+       +W     +   R+       N
Sbjct: 278 HEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWN 316

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Length = 357

 Score = 35.7 bits (82), Expect = 5e-04
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 7/48 (14%)

Query: 34 LYAVGGHDGWSYLNTTERFD--PRLRQWSFIAPM-LSPRSTAGVAVLN 78
          +Y   G  G        + D   + ++W+ +A     PR  A  A ++
Sbjct: 22 VYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFID 65

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695

 Score = 37.8 bits (87), Expect = 9e-05
 Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 27  VLEPEGPLYAVGGHDG-WSYLNTTERFDPRLRQWSFIAPMLSPRS 70
            +     L  +GG       L+    FD + R+WS I  +   R 
Sbjct: 447 TISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656

 Score = 36.9 bits (84), Expect = 2e-04
 Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 6/59 (10%)

Query: 24  GVGVLEPEGPLYAVGGH------DGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAV 76
              V+ P+G  +  GG       +  + + T E + P    +    P    R    +++
Sbjct: 459 HTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISL 517

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	79
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	99.77
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	99.76
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	99.76
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	99.75
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	99.75
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	99.74
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	99.74
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	99.74
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	99.74
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	99.74
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	99.73
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	99.72
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	99.65
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	99.65
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	99.61
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	99.52
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	99.49
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	99.45
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	85.73
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	82.56

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=99.77  E-value=4.4e-18  Score=99.93  Aligned_cols=75  Identities=24%  Similarity=0.277  Sum_probs=66.7

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCC-CCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGH-DGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||. .+....+++++||+.+++|+.+++||.+|..|+++++++
T Consensus       120 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  197 (315)
T 4asc_A          120 MCYDRLSFKWGESDPLPYVVYGHTVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDG  197 (315)
T ss_dssp             EEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT
T ss_pred             EEECCCCCcEeECCCCCCcccceeEEEE--CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECC
Confidence            47999999999998665  788888888  9999999998 445568999999999999999999999999999988764

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=99.76  E-value=5.6e-18  Score=98.86  Aligned_cols=75  Identities=29%  Similarity=0.487  Sum_probs=66.8

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEecc-CCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIA-PMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.+++++  |..++++++  +++||++||.++....+++++||+++++|+.++ +|+.+|..|+++++++
T Consensus       223 ~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~  300 (302)
T 2xn4_A          223 EVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDK  300 (302)
T ss_dssp             EEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC
T ss_pred             EEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecc
Confidence            47999999999998654  788888888  999999999887666889999999999999997 8999999999998864

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=99.76  E-value=4.2e-18  Score=100.03  Aligned_cols=75  Identities=15%  Similarity=0.202  Sum_probs=67.7

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||.++....+++++||+.+++|+.++++|.+|..++++++++
T Consensus       168 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  244 (315)
T 4asc_A          168 CVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVG  244 (315)
T ss_dssp             EEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred             EEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECC
Confidence            47999999999999665  788899999  9999999998876668899999999999999999999999999988765

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=99.75  E-value=5.2e-18  Score=98.98  Aligned_cols=75  Identities=35%  Similarity=0.551  Sum_probs=67.5

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||..+...++++++||+.+++|+.++++|.+|..++++++++
T Consensus        80 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~  156 (302)
T 2xn4_A           80 DSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGG  156 (302)
T ss_dssp             EEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred             EEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECC
Confidence            47999999999999665  788999999  9999999998876668899999999999999999999999999988764

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=99.75  E-value=2e-17  Score=96.66  Aligned_cols=74  Identities=9%  Similarity=0.097  Sum_probs=66.6

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||.. ....+++++||+.+++|..++++|.+|..|+++++++
T Consensus        27 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~  102 (306)
T 3ii7_A           27 RYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEG  102 (306)
T ss_dssp             EEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETT
T ss_pred             EEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECC
Confidence            47999999999998554  888999999  99999999987 5568999999999999999999999999999988764

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=99.74  E-value=1.4e-17  Score=97.34  Aligned_cols=75  Identities=27%  Similarity=0.401  Sum_probs=66.7

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCC-CCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHD-GWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||.+ +...++++++||+.+++|+.+++||.+|..|+++++++
T Consensus        73 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~  150 (306)
T 3ii7_A           73 DCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANG  150 (306)
T ss_dssp             EEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred             EEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECC
Confidence            47999999999998654  888999999  99999999987 44558899999999999999999999999999988764

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=99.74  E-value=2.3e-17  Score=96.69  Aligned_cols=75  Identities=36%  Similarity=0.534  Sum_probs=67.4

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||..+...++++++||+.+++|+.+++||.+|..++++++++
T Consensus       140 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  216 (308)
T 1zgk_A          140 ERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHN  216 (308)
T ss_dssp             EEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT
T ss_pred             EEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECC
Confidence            47999999999998655  788889999  9999999998876668999999999999999999999999999988764

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=99.74  E-value=2.5e-17  Score=96.54  Aligned_cols=75  Identities=33%  Similarity=0.538  Sum_probs=67.4

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||.++....+++++||+++++|+.++++|.+|..++++++++
T Consensus       187 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  263 (308)
T 1zgk_A          187 ECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQG  263 (308)
T ss_dssp             EEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT
T ss_pred             EEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECC
Confidence            47999999999998654  788888999  9999999998876668999999999999999999999999999988764

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=99.74  E-value=7.7e-18  Score=99.01  Aligned_cols=75  Identities=19%  Similarity=0.278  Sum_probs=66.9

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||.+.....+++++||+++++|+.++++|.+|..|+++++++
T Consensus       178 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  254 (318)
T 2woz_A          178 FIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAG  254 (318)
T ss_dssp             EEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETT
T ss_pred             EEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECC
Confidence            47999999999998655  788888899  9999999998776667899999999999999999999999999988764

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=99.74  E-value=2.3e-17  Score=96.96  Aligned_cols=75  Identities=25%  Similarity=0.360  Sum_probs=65.6

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCC-CCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDG-WSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |.+++++++  +++||++||... ....+++++||+.+++|+.++++|.+|..|+++++++
T Consensus       130 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  207 (318)
T 2woz_A          130 LCYDPVAAKWSEVKNLPIKVYGHNVISH--NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKG  207 (318)
T ss_dssp             EEEETTTTEEEEECCCSSCEESCEEEEE--TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred             EEEeCCCCCEeECCCCCCcccccEEEEE--CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECC
Confidence            47999999999998655  788888888  999999999743 3357899999999999999999999999999988764

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=99.73  E-value=3.6e-17  Score=95.33  Aligned_cols=75  Identities=28%  Similarity=0.524  Sum_probs=67.2

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEECC
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS   79 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~   79 (79)
                      .+||+.+++|+.++++|  |..++++++  +++||++||.++....+++++||+++++|+.++++|.+|..++++++++
T Consensus       178 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  254 (301)
T 2vpj_A          178 EKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRG  254 (301)
T ss_dssp             EEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred             EEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECC
Confidence            47999999999998655  788888889  9999999998876668899999999999999999999999999988764

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=99.72  E-value=6.2e-17  Score=94.30  Aligned_cols=75  Identities=27%  Similarity=0.510  Sum_probs=67.3

Q ss_pred             ceecCCCCC---eeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEE
Q psy6079           3 SSICLHLVF---WFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVL   77 (79)
Q Consensus         3 ~~~~~~~~~---W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~   77 (79)
                      .+||+.+++   |+.++++|  |..++++++  +++||++||..+....+++++||+.+++|+.++++|.+|..|+++++
T Consensus        81 ~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~  158 (301)
T 2vpj_A           81 ECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA  158 (301)
T ss_dssp             EEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE
T ss_pred             EEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE
Confidence            478999999   99998655  888999999  99999999988766688999999999999999999999999999887


Q ss_pred             CC
Q psy6079          78 NS   79 (79)
Q Consensus        78 ~~   79 (79)
                      ++
T Consensus       159 ~~  160 (301)
T 2vpj_A          159 SG  160 (301)
T ss_dssp             TT
T ss_pred             CC
Confidence            64

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=99.65  E-value=7.3e-16  Score=91.60  Aligned_cols=75  Identities=16%  Similarity=0.229  Sum_probs=63.1

Q ss_pred             ceecCC--CCCeeecCCCc---cceeeeEEECCCCeEEEEcCC-C----CCCCCCeEEEEeCCCCcEEeccCCC-CCCCc
Q psy6079           3 SSICLH--LVFWFPLLLLS---YMCLGVGVLEPEGPLYAVGGH-D----GWSYLNTTERFDPRLRQWSFIAPML-SPRST   71 (79)
Q Consensus         3 ~~~~~~--~~~W~~~~~~~---r~~~~~~~~~~~~~iyv~GG~-~----~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~   71 (79)
                      .+||+.  +++|+.++++|   |..++++++  +++|||+||. .    ....++++++||+.+++|+.+++|+ .+|..
T Consensus        34 ~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~  111 (357)
T 2uvk_A           34 YKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG  111 (357)
T ss_dssp             EEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSS
T ss_pred             EEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccccc
Confidence            368887  48999998554   788999999  9999999998 2    1234789999999999999999998 99999


Q ss_pred             eeEEEECC
Q psy6079          72 AGVAVLNS   79 (79)
Q Consensus        72 ~~~~~~~~   79 (79)
                      |+++++++
T Consensus       112 ~~~~~~~~  119 (357)
T 2uvk_A          112 HVTFVHNG  119 (357)
T ss_dssp             EEEEEETT
T ss_pred             ceEEEECC
Confidence            98887664

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=99.65  E-value=6.2e-16  Score=91.91  Aligned_cols=75  Identities=20%  Similarity=0.219  Sum_probs=62.2

Q ss_pred             ceecCCCCCeeecCCCc---cceeeeEEECCCCeEEEEcCCCCCC----------------------------------C
Q psy6079           3 SSICLHLVFWFPLLLLS---YMCLGVGVLEPEGPLYAVGGHDGWS----------------------------------Y   45 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~---r~~~~~~~~~~~~~iyv~GG~~~~~----------------------------------~   45 (79)
                      .+||+.+++|+.+++++   |..++++++  +++||++||.+...                                  .
T Consensus        89 ~~yd~~~~~W~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (357)
T 2uvk_A           89 HKYNPKTNSWVKLMSHAPMGMAGHVTFVH--NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFF  166 (357)
T ss_dssp             EEEETTTTEEEECSCCCSSCCSSEEEEEE--TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCC
T ss_pred             EEEeCCCCcEEECCCCCCcccccceEEEE--CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCC
Confidence            47999999999998544   777888888  99999999976431                                  3


Q ss_pred             CCeEEEEeCCCCcEEeccCCCCCCCc-eeEEEECC
Q psy6079          46 LNTTERFDPRLRQWSFIAPMLSPRST-AGVAVLNS   79 (79)
Q Consensus        46 ~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~~~   79 (79)
                      ++++++||+.+++|+.++++|.+|.. ++++++++
T Consensus       167 ~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~  201 (357)
T 2uvk_A          167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGD  201 (357)
T ss_dssp             CCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETT
T ss_pred             cccEEEEeCCCCcEEECCCCCCCCcccccEEEECC
Confidence            58999999999999999999987665 78777654

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=99.61  E-value=4e-15  Score=95.52  Aligned_cols=75  Identities=20%  Similarity=0.259  Sum_probs=64.3

Q ss_pred             ceecCCCCCeeecC-C-----C--ccceeeeEEECCCCeEEEEcCCCCCC-CCCeEEEEeCCCCcEEeccCCCCCCCcee
Q psy6079           3 SSICLHLVFWFPLL-L-----L--SYMCLGVGVLEPEGPLYAVGGHDGWS-YLNTTERFDPRLRQWSFIAPMLSPRSTAG   73 (79)
Q Consensus         3 ~~~~~~~~~W~~~~-~-----~--~r~~~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~~~~r~~~~   73 (79)
                      .+||+.+++|+.++ +     +  +|.+++++++..+++|||+||..... .++++++||+.+++|+.+++||.+|..|+
T Consensus       415 ~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~  494 (695)
T 2zwa_A          415 LQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHS  494 (695)
T ss_dssp             EEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCE
T ss_pred             EEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccce
Confidence            47999999999987 4     3  47888888773367899999987654 58899999999999999999999999999


Q ss_pred             EEEE
Q psy6079          74 VAVL   77 (79)
Q Consensus        74 ~~~~   77 (79)
                      ++++
T Consensus       495 ~~~~  498 (695)
T 2zwa_A          495 ACSL  498 (695)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            9986

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=99.52  E-value=3.3e-14  Score=91.29  Aligned_cols=72  Identities=11%  Similarity=0.113  Sum_probs=61.1

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccC---CCCCCCceeEEEE
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAP---MLSPRSTAGVAVL   77 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~~   77 (79)
                      .+||+.+++|+.++++|  |..++++++. +++|||+||.+...   ++++||+.+++|+.+++   +|.+|..|+++++
T Consensus       471 ~~yd~~t~~W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~  546 (695)
T 2zwa_A          471 WIFDMKTREWSMIKSLSHTRFRHSACSLP-DGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEF  546 (695)
T ss_dssp             EEEETTTTEEEECCCCSBCCBSCEEEECT-TSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEE
T ss_pred             EEEeCCCCcEEECCCCCCCcccceEEEEc-CCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeEEEE
Confidence            47999999999998665  7788887732 88999999987654   89999999999999986   8899999987765


Q ss_pred             C
Q psy6079          78 N   78 (79)
Q Consensus        78 ~   78 (79)
                      +
T Consensus       547 ~  547 (695)
T 2zwa_A          547 D  547 (695)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=99.49  E-value=1.5e-13  Score=87.51  Aligned_cols=73  Identities=18%  Similarity=0.071  Sum_probs=59.9

Q ss_pred             eecCCCCCeeecC--CCc--cceeeeEEECCCCeEEEEcCCCC------CCCCCeEEEEeCCCCcEEeccCCCCCCCcee
Q psy6079           4 SICLHLVFWFPLL--LLS--YMCLGVGVLEPEGPLYAVGGHDG------WSYLNTTERFDPRLRQWSFIAPMLSPRSTAG   73 (79)
Q Consensus         4 ~~~~~~~~W~~~~--~~~--r~~~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~   73 (79)
                      .||+.+++|..+.  +||  |..++++++ .+++|||+||.+.      .....++++||+.+++|+.+++++.+|..|+
T Consensus       436 ~yd~~~~~W~~~~~~~mp~~R~~~~~~~l-~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs  514 (656)
T 1k3i_A          436 LGEPGTSPNTVFASNGLYFARTFHTSVVL-PDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHS  514 (656)
T ss_dssp             CCSTTSCCEEEECTTCCSSCCBSCEEEEC-TTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTE
T ss_pred             cCCCCCCCeeEEccCCCCCCcccCCeEEC-CCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcccccc
Confidence            6899999999875  555  666665554 2889999999652      2347889999999999999999999999999


Q ss_pred             EEEE
Q psy6079          74 VAVL   77 (79)
Q Consensus        74 ~~~~   77 (79)
                      ++++
T Consensus       515 ~a~l  518 (656)
T 1k3i_A          515 ISLL  518 (656)
T ss_dssp             EEEE
T ss_pred             Hhhc
Confidence            8876

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=99.45  E-value=1.3e-13  Score=87.79  Aligned_cols=72  Identities=17%  Similarity=0.143  Sum_probs=58.3

Q ss_pred             ceecCCCCCeeecCCCc--cceee--eEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEE-
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLG--VGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVL-   77 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-   77 (79)
                      ..||+.+++|+.+++++  |..++  ++++ .+++||++||...    .++++||+.+++|..+++|+.+|..|+++++ 
T Consensus       222 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~-~~g~lyv~GG~~~----~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~  296 (656)
T 1k3i_A          222 SSWDPSTGIVSDRTVTVTKHDMFCPGISMD-GNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMS  296 (656)
T ss_dssp             EEECTTTCCBCCCEEEECSCCCSSCEEEEC-TTSCEEEECSSST----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECT
T ss_pred             EEEeCCCCcEEeCcccCCCCCCccccccCC-CCCCEEEeCCCCC----CceEEecCcCCceeECCCCCccccccceEEec
Confidence            47999999999988553  54443  3322 3899999999764    3799999999999999999999999999887 


Q ss_pred             CC
Q psy6079          78 NS   79 (79)
Q Consensus        78 ~~   79 (79)
                      +|
T Consensus       297 dg  298 (656)
T 1k3i_A          297 DG  298 (656)
T ss_dssp             TS
T ss_pred             CC
Confidence            53

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=85.73  E-value=3.7  Score=23.96  Aligned_cols=50  Identities=6%  Similarity=-0.081  Sum_probs=32.6

Q ss_pred             ceecCCCCCeeecCCCcc--ceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcE
Q psy6079           3 SSICLHLVFWFPLLLLSY--MCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQW   59 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~r--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W   59 (79)
                      .++|+.+.+-..-.+++.  .+.++...  ++++|+....     .+.+.+||+++.+-
T Consensus        68 ~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~-----~~~v~v~D~~t~~~  119 (262)
T 3nol_A           68 RKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWK-----NGLGFVWNIRNLRQ  119 (262)
T ss_dssp             EEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS-----SSEEEEEETTTCCE
T ss_pred             EEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEee-----CCEEEEEECccCcE
Confidence            357888776655444443  33446667  8899998542     36788888877653

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=82.56  E-value=5.2  Score=23.06  Aligned_cols=50  Identities=8%  Similarity=-0.110  Sum_probs=32.9

Q ss_pred             ceecCCCCCeeecCCCcc--ceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcE
Q psy6079           3 SSICLHLVFWFPLLLLSY--MCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQW   59 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~r--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W   59 (79)
                      +++|+.+++-..-.+++.  .+.++...  ++++|+....     .+.+.+||+++-+-
T Consensus        46 ~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~-----~~~v~v~D~~tl~~   97 (243)
T 3mbr_X           46 RKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWR-----NHEGFVYDLATLTP   97 (243)
T ss_dssp             EEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS-----SSEEEEEETTTTEE
T ss_pred             EEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEee-----CCEEEEEECCcCcE
Confidence            356777776655444442  34556667  8999998542     36788899877653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	79
d1zgka1	288	b.68.11.1 (A:322-609) Kelch-like ECH-associated pr	1e-11
d1zgka1	288	b.68.11.1 (A:322-609) Kelch-like ECH-associated pr	1e-07
d1k3ia3	387	b.69.1.1 (A:151-537) Galactose oxidase, central do	9e-07
d1k3ia3	387	b.69.1.1 (A:151-537) Galactose oxidase, central do	1e-05

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (132), Expect = 1e-11
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query: 24  GVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAV 76
            +G+   +G +Y +GG+DG ++L++ E +DP    WS +  M S RS  GVAV
Sbjct: 235 ALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 287

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (104), Expect = 1e-07
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 34 LYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLNS 79
          +Y  GG+     L+  E ++P    W  +A +  PRS     V+  
Sbjct: 7  IYTAGGYF-RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGG 51

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

 Score = 42.1 bits (97), Expect = 9e-07
 Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 6/73 (8%)

Query: 11  FWFPLLLLSYMCLGVGVLEPEGPLYAVGGH------DGWSYLNTTERFDPRLRQWSFIAP 64
            +    L         V+ P+G  +  GG       +  + + T E + P    +    P
Sbjct: 279 VFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNP 338

Query: 65  MLSPRSTAGVAVL 77
               R    +++L
Sbjct: 339 NSIVRVYHSISLL 351

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

 Score = 39.0 bits (89), Expect = 1e-05
 Identities = 8/71 (11%), Positives = 17/71 (23%), Gaps = 6/71 (8%)

Query: 12 WFPLLLLSYMCLGVGVLEPEGPLYAVGG------HDGWSYLNTTERFDPRLRQWSFIAPM 65
          W P + L  +     +    G +                 +  T  +DP     S     
Sbjct: 11 WGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT 70

Query: 66 LSPRSTAGVAV 76
          ++        +
Sbjct: 71 VTKHDMFCPGI 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	79
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	99.79
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	99.79
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	99.52
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	99.32

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.8e-19  Score=101.29  Aligned_cols=72  Identities=33%  Similarity=0.587  Sum_probs=65.5

Q ss_pred             ceecCCCCCeeecCCC--ccceeeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEE
Q psy6079           3 SSICLHLVFWFPLLLL--SYMCLGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAV   76 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~--~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~   76 (79)
                      .+||..+++|+.++++  +|..++++++  +++|||+||.++...++++++||+.+++|+.+++||.+|..|++|+
T Consensus       214 ~~~~~~~~~~~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~R~~~~~~~  287 (288)
T d1zgka1         214 ERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV  287 (288)
T ss_dssp             EEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE
T ss_pred             eeeeecceeeecccCccCcccceEEEEE--CCEEEEEecCCCCeecceEEEEECCCCEEEECCCCCCCcEeEEEEE
Confidence            5789999999999854  4788899999  9999999999887778999999999999999999999999998886

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.9e-19  Score=101.79  Aligned_cols=75  Identities=32%  Similarity=0.470  Sum_probs=65.9

Q ss_pred             ceecCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCC----CCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEE
Q psy6079           3 SSICLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDG----WSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAV   76 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~----~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~   76 (79)
                      ++||+++++|+.++++|  |.+++++++  +++|||+||...    ....+++++||+.+++|+.+++|+.+|..|++++
T Consensus        22 ~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~~~   99 (288)
T d1zgka1          22 EAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV   99 (288)
T ss_dssp             EEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE
T ss_pred             EEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceeccc
Confidence            68999999999998554  889999999  999999999642    2237899999999999999999999999999998


Q ss_pred             ECC
Q psy6079          77 LNS   79 (79)
Q Consensus        77 ~~~   79 (79)
                      ++|
T Consensus       100 ~~~  102 (288)
T d1zgka1         100 IDG  102 (288)
T ss_dssp             ETT
T ss_pred             cce
Confidence            865

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=99.52  E-value=1.8e-14  Score=84.38  Aligned_cols=71  Identities=18%  Similarity=0.108  Sum_probs=55.1

Q ss_pred             cCCCCCeeecCCCc--cceeeeEEECCCCeEEEEcCCCC------CCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEE
Q psy6079           6 CLHLVFWFPLLLLS--YMCLGVGVLEPEGPLYAVGGHDG------WSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVL   77 (79)
Q Consensus         6 ~~~~~~W~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~   77 (79)
                      +...+.|+.+.+||  |..++++++. +++||++||...      .....++++||+++++|+.+++|+.+|..|+++++
T Consensus       273 ~~~~~~~~~~~~~p~~r~~~~~~~~~-dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l  351 (387)
T d1k3ia3         273 GTSPNTVFASNGLYFARTFHTSVVLP-DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLL  351 (387)
T ss_dssp             TSCCEEEECTTCCSSCCBSCEEEECT-TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEE
T ss_pred             ccCCCceeeccccccccccceeeecc-CCeEEEECCcccCccCCCCcEeceEEEEECCCCeEEECCCCCCcccceEEEEE
Confidence            34455788887665  6666666662 679999999642      23466899999999999999999999999988766

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=99.32  E-value=3.6e-12  Score=74.45  Aligned_cols=71  Identities=18%  Similarity=0.193  Sum_probs=55.8

Q ss_pred             ceecCCCCCeeecCCC--ccce--eeeEEECCCCeEEEEcCCCCCCCCCeEEEEeCCCCcEEeccCCCCCCCceeEEEEC
Q psy6079           3 SSICLHLVFWFPLLLL--SYMC--LGVGVLEPEGPLYAVGGHDGWSYLNTTERFDPRLRQWSFIAPMLSPRSTAGVAVLN   78 (79)
Q Consensus         3 ~~~~~~~~~W~~~~~~--~r~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~   78 (79)
                      .+||+.+++|+.++++  +|..  ++.++ ..+++||++||...    +++++||+.+++|..+++|+.+|..|+++++.
T Consensus        55 ~~yd~~t~~w~~~~~~~~~~~~~~~~~~~-~~~g~i~v~Gg~~~----~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~  129 (387)
T d1k3ia3          55 SSWDPSTGIVSDRTVTVTKHDMFCPGISM-DGNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMS  129 (387)
T ss_dssp             EEECTTTCCBCCCEEEECSCCCSSCEEEE-CTTSCEEEECSSST----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECT
T ss_pred             EEEECCCCcEeecCCCCCCcccceeEEEE-ecCCcEEEeecCCC----cceeEecCccCcccccccccccccccceeeec
Confidence            3799999999987643  3433  33333 34889999998653    57899999999999999999999999988763