Psyllid ID: psy6182


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320---
MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFLL
cccccHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEcccccEEEEEEEcccccccEEEcccccccEEEEccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEEcccccEEEEEEEEEEEEEEEEEEEcccccccccccccccccccccHHHHHHHHccccEEcccccccccccccccccHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccc
ccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccccccEEEEccccEEEEEEEcccEEEEEccccccccccEEEccccccccccHHEHEEcccccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccEEEEEEEEEEEEEEEEEEEccccccHHHccccccccccccHHHHHHHHHcccEEEccccccccccccccccccEEEEHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccc
MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLtecngrfegldvitptEFEVVLYLNQMgelnfvddgslpgcavlklsdgrkRSMSLWVEFITASGYLSARKMRSRFQTLVAQAcdkcayrdsvkmiADTTEVKLRIRERYIVqitpsfkcggiwprsaghwplpqipwphpnlvvetkteGCDLLSKECAAMQgkqsamegdawVMSFTDVESKLLIGGCRKKCLSILKTLRDRhlelpgnpvtnyhMKTLLLYECekhpnelewdesclgdrINGILLQLISCLRMLFLL
mlvpsdmmAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLRevevqeprfissltecngrfeglDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACdkcayrdsvkmiadttevklrirERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLrdrhlelpgnpvtnYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFLL
MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFLL
************KILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFL*
************KILYQLNKYYGERVQ*******KTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFLL
********AAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAA********EGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFLL
MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAA****QSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFLL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
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MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISSLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISCLRMLFLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query323 2.2.26 [Sep-21-2011]
Q0IES8365 Protein mab-21 OS=Aedes a N/A N/A 0.984 0.871 0.817 1e-160
Q5TW90365 Protein mab-21 OS=Anophel yes N/A 0.984 0.871 0.814 1e-159
Q29H56365 Protein mab-21 OS=Drosoph yes N/A 0.984 0.871 0.808 1e-158
Q9U3W6365 Protein mab-21 OS=Drosoph yes N/A 0.984 0.871 0.801 1e-157
A4IIW0359 Protein mab-21-like 2 OS= yes N/A 0.965 0.869 0.801 1e-153
Q6DCQ5359 Protein mab-21-like 2-B O N/A N/A 0.965 0.869 0.801 1e-152
Q9Y586359 Protein mab-21-like 2 OS= yes N/A 0.965 0.869 0.798 1e-152
Q8BPP1359 Protein mab-21-like 2 OS= yes N/A 0.965 0.869 0.794 1e-151
Q9I9K2359 Protein mab-21-like 2-A O N/A N/A 0.965 0.869 0.798 1e-151
Q8UUZ1359 Protein mab-21-like 2 OS= yes N/A 0.965 0.869 0.785 1e-151
>sp|Q0IES8|MAB21_AEDAE Protein mab-21 OS=Aedes aegypti GN=mab-21 PE=3 SV=1 Back     alignment and function desciption
 Score =  563 bits (1450), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 260/318 (81%), Positives = 295/318 (92%)

Query: 1   MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFIS 60
           MLVP +M+A QSK++YQ+NKY  +RVQ RKA I KTI+EVC+VVQDVL+EVEVQEPRFIS
Sbjct: 1   MLVPPEMIAVQSKLIYQMNKYCADRVQARKAQIHKTIQEVCRVVQDVLKEVEVQEPRFIS 60

Query: 61  SLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWV 120
           SL + NGRF+GL+V++PTEFE+++YLNQMG LNFVDDG+LPGCAVLKLSDGRKRSMSLWV
Sbjct: 61  SLNDYNGRFDGLEVVSPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWV 120

Query: 121 EFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSF 180
           EFITASGYLSARK+RSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRER IVQITP+F
Sbjct: 121 EFITASGYLSARKIRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERIIVQITPAF 180

Query: 181 KCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSF 240
           KC G+WPRSA HWPLPQIPWPHPN+V E KTEG D+LSKEC A+QGK SAMEGDAWV+SF
Sbjct: 181 KCAGLWPRSASHWPLPQIPWPHPNIVSEVKTEGFDMLSKECIALQGKNSAMEGDAWVLSF 240

Query: 241 TDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDES 300
           T+ E+KLL GGCR++CLSILKTLRDRHL+LPGNPVT+Y MKTLLLYECEKHP E+EWDE+
Sbjct: 241 TEAENKLLQGGCRRRCLSILKTLRDRHLDLPGNPVTSYIMKTLLLYECEKHPREMEWDEN 300

Query: 301 CLGDRINGILLQLISCLR 318
           C+GDRINGI LQLISCL+
Sbjct: 301 CMGDRINGIFLQLISCLQ 318





Aedes aegypti (taxid: 7159)
>sp|Q5TW90|MAB21_ANOGA Protein mab-21 OS=Anopheles gambiae GN=mab-21 PE=3 SV=3 Back     alignment and function description
>sp|Q29H56|MAB21_DROPS Protein mab-21 OS=Drosophila pseudoobscura pseudoobscura GN=mab-21 PE=3 SV=1 Back     alignment and function description
>sp|Q9U3W6|MAB21_DROME Protein mab-21 OS=Drosophila melanogaster GN=mab-21 PE=1 SV=2 Back     alignment and function description
>sp|A4IIW0|MB212_XENTR Protein mab-21-like 2 OS=Xenopus tropicalis GN=mab21l2 PE=2 SV=1 Back     alignment and function description
>sp|Q6DCQ5|M212B_XENLA Protein mab-21-like 2-B OS=Xenopus laevis GN=mab21l2-b PE=2 SV=1 Back     alignment and function description
>sp|Q9Y586|MB212_HUMAN Protein mab-21-like 2 OS=Homo sapiens GN=MAB21L2 PE=2 SV=1 Back     alignment and function description
>sp|Q8BPP1|MB212_MOUSE Protein mab-21-like 2 OS=Mus musculus GN=Mab21l2 PE=2 SV=1 Back     alignment and function description
>sp|Q9I9K2|M212A_XENLA Protein mab-21-like 2-A OS=Xenopus laevis GN=mab21l2-a PE=2 SV=1 Back     alignment and function description
>sp|Q8UUZ1|MB212_DANRE Protein mab-21-like 2 OS=Danio rerio GN=mab21l2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query323
328714729378 PREDICTED: protein mab-21-like [Acyrthos 0.984 0.841 0.839 1e-162
91080531365 PREDICTED: similar to cell fate determin 0.984 0.871 0.839 1e-162
332374600365 unknown [Dendroctonus ponderosae] 0.984 0.871 0.836 1e-161
383855626365 PREDICTED: protein mab-21-like [Megachil 0.984 0.871 0.823 1e-161
66511238365 PREDICTED: protein mab-21-like isoform 1 0.984 0.871 0.820 1e-161
340715024365 PREDICTED: protein mab-21-like [Bombus t 0.984 0.871 0.817 1e-160
156554286365 PREDICTED: protein mab-21-like [Nasonia 0.984 0.871 0.820 1e-160
242001058365 cell fate determining protein mab21l2, p 0.984 0.871 0.811 1e-160
157117931365 cell fate determining protein mab21l2 [A 0.984 0.871 0.817 1e-158
347964992365 AGAP001034-PA [Anopheles gambiae str. PE 0.984 0.871 0.814 1e-158
>gi|328714729|ref|XP_003245435.1| PREDICTED: protein mab-21-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 267/318 (83%), Positives = 293/318 (92%)

Query: 1   MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFIS 60
           MLVP DM++AQ+K+ YQL K++ ERV  RK +  KTIREVCKVVQDVLREVE QEPRFIS
Sbjct: 14  MLVPQDMLSAQTKMSYQLGKFWAERVMVRKTAAVKTIREVCKVVQDVLREVEAQEPRFIS 73

Query: 61  SLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWV 120
           SL ECNGR+EGLDV++PTEFE+VLYLNQMG LNFVDDGSLPGCAVLKLSDGRKRSMSLWV
Sbjct: 74  SLVECNGRYEGLDVVSPTEFEIVLYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWV 133

Query: 121 EFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSF 180
           EFITASGYLSARK+RSRFQTLVAQACDKCAYRDSVKMIADT+EVKLRIRERY+VQITPSF
Sbjct: 134 EFITASGYLSARKIRSRFQTLVAQACDKCAYRDSVKMIADTSEVKLRIRERYVVQITPSF 193

Query: 181 KCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSF 240
           KC GIWPRS+ HWPLPQIPWPHPNLV E KTEG DLLSKEC  + GKQSA+EGDAWVMSF
Sbjct: 194 KCAGIWPRSSAHWPLPQIPWPHPNLVAEVKTEGFDLLSKECVTLHGKQSALEGDAWVMSF 253

Query: 241 TDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDES 300
            DVE++L+ GGCRK+CLS+LKTLRDRHL+LPGNPVTNYH+KTLLLYECEKHP E+EWDE 
Sbjct: 254 VDVENRLMYGGCRKRCLSVLKTLRDRHLDLPGNPVTNYHIKTLLLYECEKHPLEMEWDEP 313

Query: 301 CLGDRINGILLQLISCLR 318
           CL DRINGILLQLISCL+
Sbjct: 314 CLSDRINGILLQLISCLQ 331




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080531|ref|XP_966681.1| PREDICTED: similar to cell fate determining protein mab21l2 [Tribolium castaneum] gi|270005805|gb|EFA02253.1| hypothetical protein TcasGA2_TC007916 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332374600|gb|AEE62441.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|383855626|ref|XP_003703311.1| PREDICTED: protein mab-21-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|66511238|ref|XP_623075.1| PREDICTED: protein mab-21-like isoform 1 [Apis mellifera] gi|380019983|ref|XP_003693878.1| PREDICTED: protein mab-21-like isoform 1 [Apis florea] gi|380019985|ref|XP_003693879.1| PREDICTED: protein mab-21-like isoform 2 [Apis florea] Back     alignment and taxonomy information
>gi|340715024|ref|XP_003396021.1| PREDICTED: protein mab-21-like [Bombus terrestris] gi|350417195|ref|XP_003491303.1| PREDICTED: protein mab-21-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|156554286|ref|XP_001600392.1| PREDICTED: protein mab-21-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|242001058|ref|XP_002435172.1| cell fate determining protein mab21l2, putative [Ixodes scapularis] gi|215498502|gb|EEC07996.1| cell fate determining protein mab21l2, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|157117931|ref|XP_001653106.1| cell fate determining protein mab21l2 [Aedes aegypti] gi|122114992|sp|Q0IES8.1|MAB21_AEDAE RecName: Full=Protein mab-21 gi|108875901|gb|EAT40126.1| AAEL008118-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|347964992|ref|XP_560259.3| AGAP001034-PA [Anopheles gambiae str. PEST] gi|387912899|sp|Q5TW90.3|MAB21_ANOGA RecName: Full=Protein mab-21 gi|333466573|gb|EAL41690.3| AGAP001034-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query323
UNIPROTKB|Q29H56365 mab-21 "Protein mab-21" [Droso 0.984 0.871 0.808 2.8e-144
FB|FBgn0029003365 mab-21 "mab-21" [Drosophila me 0.984 0.871 0.801 2e-143
UNIPROTKB|Q9Y586359 MAB21L2 "Protein mab-21-like 2 0.965 0.869 0.798 1.1e-137
UNIPROTKB|G3MXA1359 MAB21L2 "Uncharacterized prote 0.965 0.869 0.794 2.2e-137
UNIPROTKB|E2R6I8359 MAB21L2 "Uncharacterized prote 0.965 0.869 0.794 2.2e-137
UNIPROTKB|F2Z5C6359 MAB21L2 "Uncharacterized prote 0.965 0.869 0.794 2.2e-137
MGI|MGI:1346022359 Mab21l2 "mab-21-like 2 (C. ele 0.965 0.869 0.794 2.2e-137
RGD|1595520359 Mab21l2 "mab-21-like 2 (C. ele 0.965 0.869 0.794 2.2e-137
ZFIN|ZDB-GENE-020516-1359 mab21l1 "mab-21-like 1" [Danio 0.965 0.869 0.785 3.6e-137
UNIPROTKB|Q8AY65359 MAB21L1 "Protein mab-21-like 1 0.965 0.869 0.788 9.5e-137
UNIPROTKB|Q29H56 mab-21 "Protein mab-21" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
 Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
 Identities = 257/318 (80%), Positives = 292/318 (91%)

Query:     1 MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFIS 60
             MLVPSDM+AAQSK++YQ+NKY  +RVQ RKA I K I+EVC++VQDVL+EVEVQEPRFIS
Sbjct:     1 MLVPSDMIAAQSKMVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFIS 60

Query:    61 SLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWV 120
             SL + NGRFEGL+VI+PTEFE+++YLNQMG LNFVDDG+LPGCAVLKLSDGRKRSMSLWV
Sbjct:    61 SLNDYNGRFEGLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWV 120

Query:   121 EFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSF 180
             EFITASGYLSARK+RSRFQTLVAQACDKCAYRD VKMIADTTEVKLRIRER IVQITP+F
Sbjct:   121 EFITASGYLSARKIRSRFQTLVAQACDKCAYRDIVKMIADTTEVKLRIRERIIVQITPAF 180

Query:   181 KCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSF 240
             KC G+WPRSA HWPLP IPWPHPN+V E KTEG D+LSKEC A+QGK SAMEGDAWV+SF
Sbjct:   181 KCAGLWPRSASHWPLPGIPWPHPNIVAEVKTEGFDMLSKECIALQGKNSAMEGDAWVLSF 240

Query:   241 TDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDES 300
             TD E++LL G  R++CLSILKTLRDRHL+LPGNPVT+YH+KTLLLYECEKHP E+EW+E+
Sbjct:   241 TDAENRLLQGASRRRCLSILKTLRDRHLDLPGNPVTSYHLKTLLLYECEKHPREMEWEEN 300

Query:   301 CLGDRINGILLQLISCLR 318
             C+ DRINGI LQLISCL+
Sbjct:   301 CIADRINGIFLQLISCLQ 318




GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
FB|FBgn0029003 mab-21 "mab-21" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y586 MAB21L2 "Protein mab-21-like 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G3MXA1 MAB21L2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R6I8 MAB21L2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z5C6 MAB21L2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1346022 Mab21l2 "mab-21-like 2 (C. elegans)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1595520 Mab21l2 "mab-21-like 2 (C. elegans)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020516-1 mab21l1 "mab-21-like 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q8AY65 MAB21L1 "Protein mab-21-like 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A4FV14MB211_BOVINNo assigned EC number0.78840.96590.8690noN/A
Q8BPP1MB212_MOUSENo assigned EC number0.79480.96590.8690yesN/A
Q9GQ38MAB21_CAEBRNo assigned EC number0.57540.96280.8543N/AN/A
Q6NYB4MB211_DANRENo assigned EC number0.78520.96590.8690noN/A
Q20054MAB21_CAEELNo assigned EC number0.57540.96280.8543yesN/A
Q13394MB211_HUMANNo assigned EC number0.78840.96590.8690noN/A
Q9Y106MB21L_DROMENo assigned EC number0.73200.98450.8641noN/A
Q29H56MAB21_DROPSNo assigned EC number0.80810.98450.8712yesN/A
Q29H55MB21L_DROPSNo assigned EC number0.74450.98450.8641noN/A
Q0IES8MAB21_AEDAENo assigned EC number0.81760.98450.8712N/AN/A
Q0V9X7MB211_XENTRNo assigned EC number0.78520.96590.8690noN/A
Q8UUZ1MB212_DANRENo assigned EC number0.78520.96590.8690yesN/A
Q9Y586MB212_HUMANNo assigned EC number0.79800.96590.8690yesN/A
Q7QHX4MB21L_ANOGANo assigned EC number0.74520.98450.8712noN/A
Q9I9K2M212A_XENLANo assigned EC number0.79800.96590.8690N/AN/A
Q9U3W6MAB21_DROMENo assigned EC number0.80180.98450.8712yesN/A
Q5TW90MAB21_ANOGANo assigned EC number0.81440.98450.8712yesN/A
Q6DCQ5M212B_XENLANo assigned EC number0.80120.96590.8690N/AN/A
O70299MB211_MOUSENo assigned EC number0.78840.96590.8690noN/A
Q0IES7MB21L_AEDAENo assigned EC number0.74210.98450.8712N/AN/A
Q6GQD9MB211_XENLANo assigned EC number0.78200.96590.8690N/AN/A
Q8AY65MB211_CHICKNo assigned EC number0.78840.96590.8690yesN/A
A4IIW0MB212_XENTRNo assigned EC number0.80120.96590.8690yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
pfam03281288 pfam03281, Mab-21, Mab-21 protein 8e-94
>gnl|CDD|217473 pfam03281, Mab-21, Mab-21 protein Back     alignment and domain information
 Score =  280 bits (717), Expect = 8e-94
 Identities = 116/262 (44%), Positives = 161/262 (61%), Gaps = 19/262 (7%)

Query: 67  GRFEGLDVITPTEFEVVLYLNQMGELN--FVDDGSLPGCAVLKLSDGRKRSMSLWVEFIT 124
             +EGL V++P EF+V++ LN  G       D G  PG A+LKLS    R  SL  E++T
Sbjct: 1   SYYEGLKVLSPNEFDVMIPLNGEGVFKKVLEDRGRPPGYALLKLSS---RDPSLLDEWLT 57

Query: 125 -ASGYLSARKMRSRFQTLVAQACDKCAYRD--SVKMIADTTEVKLRIRE---RYIVQITP 178
            A GYLS +K+ SRF  LV++A +K +Y D     +  +   V L + E   +Y V + P
Sbjct: 58  CADGYLSPKKVLSRFLKLVSRAVNKLSYSDVIVESLEPNGPAVTLAVEEDGLQYSVDLVP 117

Query: 179 SFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVM 238
           +F+C G WP SA  WP     WP P L+ E K+EG  L+ K       K+++ +GD W +
Sbjct: 118 AFECPGGWPESAQEWPRRSRRWPSPELIEEIKSEGFHLVPKPS-----KKNSKDGDEWRL 172

Query: 239 SFTDVESKLL--IGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELE 296
           SF+  E  LL  IGGCR+KCL ILK LR+  L  P + +++YH+KTLLL+ECEKHP + +
Sbjct: 173 SFSQAEKALLANIGGCRRKCLRILKYLREVELGPP-SVISSYHLKTLLLWECEKHPEDSD 231

Query: 297 WDESCLGDRINGILLQLISCLR 318
           WDES LGDR+ G+L +L+ CLR
Sbjct: 232 WDESNLGDRLLGLLDELVKCLR 253


This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development. Length = 288

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 323
KOG3963|consensus382 100.0
PF03281292 Mab-21: Mab-21 protein 100.0
cd05400143 NT_2-5OAS_ClassI-CCAase Nucleotidyltransferase (NT 95.07
PRK13300 447 tRNA CCA-pyrophosphorylase; Provisional 94.49
TIGR03671 408 cca_archaeal CCA-adding enzyme. 93.56
>KOG3963|consensus Back     alignment and domain information
Probab=100.00  E-value=1.6e-67  Score=486.11  Aligned_cols=314  Identities=69%  Similarity=1.170  Sum_probs=293.2

Q ss_pred             hhHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCccccc-ccccccCcccceecCCCceEEEEE
Q psy6182           7 MMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISS-LTECNGRFEGLDVITPTEFEVVLY   85 (323)
Q Consensus         7 ~~~~~~~~~~~L~~~~~~~v~~~~~~~~~~~~~v~~iv~~ll~~v~~~d~~F~~~-l~~~Gs~ye~lkv~~pdefdl~vp   85 (323)
                      |++++++..++++.||.++++++.++++++.+.+.++|+++++++..+|+||+.. -..+|.++||+++.+|.+|.+.+|
T Consensus         1 m~~l~~~~v~~~~~~~~~rvqlr~~q~~~~i~ev~kvVq~l~~ev~~qe~rf~as~~~~~g~~~e~ldvl~p~~~~~~~~   80 (382)
T KOG3963|consen    1 MIALQQKTVYQLNRYLDERVQLRKAQIAKTIREVLKVVQDLLKEVEVQEPRFIASLSERTGGRFEGLDVLSPSEFETVLY   80 (382)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHhHHhHHHHHHHHHHHHHHhhccccCcceeccCCCccCcccCCeeEechhHhCCeee
Confidence            7899999999999999999999999999999999999999999999999999976 356889999999999999999999


Q ss_pred             ec----------cCCccccccCCCCCceeeeeec--------CCCCCchhhhHH-HhhcCCCcCHHHHHHHHHHHHHHHH
Q psy6182          86 LN----------QMGELNFVDDGSLPGCAVLKLS--------DGRKRSMSLWVE-FITASGYLSARKMRSRFQTLVAQAC  146 (323)
Q Consensus        86 L~----------~~~~~~~~~~~~~pG~~~l~l~--------d~~~~~~~~w~~-~~~~~g~Ls~~kv~~~F~~lv~~ai  146 (323)
                      |+          +++.++|+++|+.+||+.++++        ++++++++.|.+ |.+++||++|.||++||+.+|.+|+
T Consensus        81 l~~l~~~r~~~~Q~~v~~~~~dgtl~~C~~~~Ls~~~~~e~t~~~~rS~~~wve~~~sas~~~~~~kv~~~F~~lv~~al  160 (382)
T KOG3963|consen   81 LNFLLLVRALKLQMGVFNFVDDGTLPGCAVLKLSLRLFDEGTDGRKRSMSLWVEHFNSASGYLSPAKVLSRFRTLVAQAL  160 (382)
T ss_pred             chhhhcchhHHHhhcccccccccccCCCCccchhhhhhhhhhhhhhhhHHHHHHhhcccccccCCHHHHHHHHHHHHHHH
Confidence            99          8889999999999999989887        788899999998 8889999999999999999999999


Q ss_pred             HhcccCCceeeecCCCeeEEEEce---EEEEEEEEEEEeCCCCCccCCCCCCCCCCCCCccccccccccceeEeeCcccc
Q psy6182         147 DKCAYRDSVKMIADTTEVKLRIRE---RYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAA  223 (323)
Q Consensus       147 ~~~~~~~~~~~~~~~~a~tl~v~~---~isvdlvPav~~~~~Wp~~a~~w~~~~~~wp~~~~~~~~~~~g~~lvpk~~~~  223 (323)
                      .+|.+++.+.++.++.++++.+..   ++.++|||||+++|+||++|.+||.+..+||++.++++||++||||+|+....
T Consensus       161 ~~c~~~~qv~Ml~~~~vvk~~~~~~~~~~~~eivPav~~~g~Wp~~A~~wpl~~~~WP~~~~~~evks~GF~ll~~~cs~  240 (382)
T KOG3963|consen  161 DKCQLSDQVKMLGDTSVVKLRIRESIYRMLVEIVPAVHCPGIWPRSAAHWPLEHIPWPGPNRVEEVKSEGFNLLSKECSI  240 (382)
T ss_pred             HHHhhccccccccchHHHHHHHHHHHHHHHHhhcceeecCCCCchhhhhCccccCCCCcHHHHHHHHhccccccchhhhh
Confidence            999999999998888898888774   56699999999999999999999999999999999999999999999955432


Q ss_pred             ccCcCCCcccCccccchHHHHHHHHccCChHHHHHHHHHHHHhcCCCCCCC-CChHHHHHHHHHHHHhCCCCCCCCcccH
Q psy6182         224 MQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNP-VTNYHMKTLLLYECEKHPNELEWDESCL  302 (323)
Q Consensus       224 ~~~~~~~~~~~~WrlSF~~~E~~ll~~~~r~~cl~ilK~L~~~~l~~~g~~-LtsyhLKTvlL~~~~~~p~~~~W~~~~L  302 (323)
                       .++++++.++.||+||..+|..+.++|||++|++|||.|++.+..+||++ +|+|||||++||+||++|+++||+++.+
T Consensus       241 -~~~kn~~~~~~Wrl~f~~aE~~L~~gg~rrk~~qi~k~Lr~~~id~pg~p~it~yhLkt~mlw~CEkhp~~~dW~E~~~  319 (382)
T KOG3963|consen  241 -KQGKNSMEEDAWRLSFAEAENRLEKGGCRRKCLQILKTLRDRHIDLPGNPKITNYHLKTLLLWECEKHPREYDWQEDCL  319 (382)
T ss_pred             -hhccCCcchhhHHHhhHHHHHHHHhcchHHHHHHHHHHHHHHHccCCCCCcccHHHHHHHHHHHHhhCccccccchhHH
Confidence             23345588899999999999999999999999999999999998889977 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q psy6182         303 GDRINGILLQLISCLRMLF  321 (323)
Q Consensus       303 ~~rl~~lL~~L~~cL~~~~  321 (323)
                      ++||++++++|++||++=+
T Consensus       320 ~~rl~gii~~L~~CL~~r~  338 (382)
T KOG3963|consen  320 GDRLLGIILQLISCLQCRR  338 (382)
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            9999999999999998743



>PF03281 Mab-21: Mab-21 protein Back     alignment and domain information
>cd05400 NT_2-5OAS_ClassI-CCAase Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme Back     alignment and domain information
>PRK13300 tRNA CCA-pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR03671 cca_archaeal CCA-adding enzyme Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query323
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.2 bits (111), Expect = 6e-06
 Identities = 47/341 (13%), Positives = 98/341 (28%), Gaps = 104/341 (30%)

Query: 4   PSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREV------------ 51
           P  ++    K+LYQ++  +  R     +  +  I+     +Q  LR +            
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSR-----SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249

Query: 52  --EVQEPRFISSL---------TECNGRFEGLDVITPTEFEVV-----LYLNQMGEL--N 93
              VQ  +  ++          T      + L   T T   +      L  +++  L   
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309

Query: 94  FVD--DGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAY 151
           ++D     LP   +        R +S+  E I        R   + +       CDK   
Sbjct: 310 YLDCRPQDLPREVL----TTNPRRLSIIAESI--------RDGLATWDNWKHVNCDK--L 355

Query: 152 RDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLP----QIPWPHPNLVV 207
              ++   +  E     R+ +            ++P SA    +P     + W       
Sbjct: 356 TTIIESSLNVLEPAE-YRKMFD-----RL---SVFPPSA---HIPTILLSLIWF------ 397

Query: 208 ETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFT--DVESKLLIGGCRKKCLSILKTLRD 265
           +       ++  +      K S +E      + +   +  +L     + K  +    L  
Sbjct: 398 DVIKSDVMVVVNKLH----KYSLVEKQPKESTISIPSIYLEL-----KVKLEN-EYALHR 447

Query: 266 RHLE------------LPGNPVTNY-------HMKTLLLYE 287
             ++            L    +  Y       H+K +   E
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query323
1px5_A349 2'-5'-oligoadenylate synthetase 1; 5-stranded anti 98.45
1r89_A 437 TRNA nucleotidyltransferase; CCA adding enzyme, in 94.7
>1px5_A 2'-5'-oligoadenylate synthetase 1; 5-stranded antiparalel beta sheet, four helix bundle, transferase; HET: YCM; 1.74A {Sus scrofa} SCOP: a.160.1.2 d.218.1.6 Back     alignment and structure
Probab=98.45  E-value=7.4e-06  Score=77.70  Aligned_cols=243  Identities=10%  Similarity=0.162  Sum_probs=140.6

Q ss_pred             HHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcC-Ccccc-cccccccCcccceecCCCceEEEEEeccCCccc
Q psy6182          16 YQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQE-PRFIS-SLTECNGRFEGLDVITPTEFEVVLYLNQMGELN   93 (323)
Q Consensus        16 ~~L~~~~~~~v~~~~~~~~~~~~~v~~iv~~ll~~v~~~d-~~F~~-~l~~~Gs~ye~lkv~~pdefdl~vpL~~~~~~~   93 (323)
                      .+|+.|..++|+..++++.++.+.+..|...|-+...... ..+.. .+...|||--|..+..-...||+|.|.  ..- 
T Consensus         9 ~~l~~fi~~~l~p~~~~~~~i~~~~~~I~~~L~~~~~~~~~~~~~v~~v~~~GSyargT~lrg~sDiDlvV~l~--~~~-   85 (349)
T 1px5_A            9 RDLDKFIEDHLLPNTXFRTQVKEAIDIVXRFLKERCFQGTADPVRVSKVVKGGSSGKGTTLRGRSDADLVVFLT--KLT-   85 (349)
T ss_dssp             GGHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEEEEEC--------CEEEEEEEEEE--SCS-
T ss_pred             HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhhcccccCCcceEEEEEecCcCCCcccCCCCceeEEEEEC--CCC-
Confidence            4689999999999988888766655555544433321111 01322 356789999999988778899888887  110 


Q ss_pred             cccCCCCCceeeeeecCCCCCchhhhHHHhhcCCCcCHHHHHHHHHHHHHHHHHhcccCCceeee----cCCCeeEEEEc
Q psy6182          94 FVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMI----ADTTEVKLRIR  169 (323)
Q Consensus        94 ~~~~~~~pG~~~l~l~d~~~~~~~~w~~~~~~~g~Ls~~kv~~~F~~lv~~ai~~~~~~~~~~~~----~~~~a~tl~v~  169 (323)
                                           +.+.+.+        ...++++.+++.+.+.-..-.+...+.+.    ...-++++.+.
T Consensus        86 ---------------------~~~~~~~--------~~~~~l~~i~~~L~~~~~~~~~~~~~ev~~~~~~~p~~v~~~~~  136 (349)
T 1px5_A           86 ---------------------SFEDQLR--------RRGEFIQEIRRQLEACQREQKFKVTFEVQSPRRENPRALSFVLS  136 (349)
T ss_dssp             ---------------------CTTHHHH--------THHHHHHHHHHHHHHHHHHCCCSSEEEECCC------CCEEEEE
T ss_pred             ---------------------chhhHHh--------hHHHHHHHHHHHHHHhhhhhccccceeEecccccCCceEEEEEE
Confidence                                 0111111        12467777777776655443333223221    12335777774


Q ss_pred             -----eEEEEEEEEEEEeCCCCCccCCCCCCCCCCCCCccccccccccceeEeeCccccccCcCCCcccCccccchHHHH
Q psy6182         170 -----ERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVE  244 (323)
Q Consensus       170 -----~~isvdlvPav~~~~~Wp~~a~~w~~~~~~wp~~~~~~~~~~~g~~lvpk~~~~~~~~~~~~~~~~WrlSF~~~E  244 (323)
                           ..+.||+|||+..-+..         .....|++.....       +++.....       .....|..+|+...
T Consensus       137 ~~~~~~~~~vDVvPa~~~l~~~---------~~~~~~~~~~y~~-------li~~~~~~-------~~~g~~~~~~~~~h  193 (349)
T 1px5_A          137 SPQLQQEVEFDVLPAFDALGQW---------TPGYKPNPEIYVQ-------LIKECKSR-------GKEGEFSTCFTELQ  193 (349)
T ss_dssp             ETTTTEEEEEEEEEEECSSCSC---------CTTSCCCHHHHHH-------HHHHHHHH-------TCTTTTGGGGHHHH
T ss_pred             ccCcCCceEEEEEEehhhhccc---------ccccCCChHHHHH-------HHhhcccc-------ccCccchhcCHHHH
Confidence                 47999999999743210         0111233321110       22111000       12347999999988


Q ss_pred             HHHHc--cCChHHHHHHHHHHHHhc-CCCCCCCCChHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHH
Q psy6182         245 SKLLI--GGCRKKCLSILKTLRDRH-LELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISC  316 (323)
Q Consensus       245 ~~ll~--~~~r~~cl~ilK~L~~~~-l~~~g~~LtsyhLKTvlL~~~~~~p~~~~W~~~~L~~rl~~lL~~L~~c  316 (323)
                      ...++  ++..+..+|++|..+... .+..+..++||.|..+..++.+..+...   +-++++.|..+|..+.+.
T Consensus       194 ~~~v~~~~~~~k~lIRLlK~W~~~~~~~~~~~~~ssy~lELL~~~a~e~~~~~~---~~~~~~~f~~vle~l~~~  265 (349)
T 1px5_A          194 RDFLRNRPTKLKSLIRLVKHWYQTCKKTHGNKLPPQYALELLTVYAWEQGSRKT---DFSTAQGFQTVLELVLKH  265 (349)
T ss_dssp             HHHHHSSCHHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHHHHHTCCS---SCCHHHHHHHHHHHHHTG
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHhhhcccCCCCChHHHHHHHHHHHHhCCCcc---CCCHHHHHHHHHHHHHhC
Confidence            88887  334478999999999864 2222336999999999999999865443   345788899988877653



>1r89_A TRNA nucleotidyltransferase; CCA adding enzyme, incoming nucleotide, nucleotidyltransfera superfamily; HET: CTP; 1.80A {Archaeoglobus fulgidus} SCOP: a.160.1.3 d.218.1.7 d.58.16.2 PDB: 1r8a_A 1r8b_A* 1r8c_A* 1sz1_A* 1tfw_A* 1tfy_A* 1uet_A 1ueu_A* 1uev_A* 2dr5_A 2dr7_A 2dr8_A* 2dr9_A 2dra_A* 2drb_A 2dvi_A* 2zh1_A 2zh2_A 2zh3_A 2zh4_A ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query323
d1px5a2200 2'-5'-oligoadenylate synthetase 1, OAS1, N-termina 96.65
d1r89a2142 tRNA nucleotidyltransferase, N-terminal domain {Ar 91.87
>d1px5a2 d.218.1.6 (A:1-200) 2'-5'-oligoadenylate synthetase 1, OAS1, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: 2'-5'-oligoadenylate synthetase 1, OAS1, N-terminal domain
domain: 2'-5'-oligoadenylate synthetase 1, OAS1, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.65  E-value=0.0078  Score=50.34  Aligned_cols=133  Identities=11%  Similarity=0.166  Sum_probs=74.3

Q ss_pred             HHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcC-----Cccccc-ccccccCcccceecCCCceEEEEEeccC
Q psy6182          16 YQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQE-----PRFISS-LTECNGRFEGLDVITPTEFEVVLYLNQM   89 (323)
Q Consensus        16 ~~L~~~~~~~v~~~~~~~~~~~~~v~~iv~~ll~~v~~~d-----~~F~~~-l~~~Gs~ye~lkv~~pdefdl~vpL~~~   89 (323)
                      ..|+.|..++++..++-..+    +.+.|+.|...++.++     +.+... +..+||+..|.-+..-.+.|++|.|.  
T Consensus         9 ~~Ld~fI~~~Lqp~~~f~~~----~~~avd~i~~fLke~cf~~~~~~v~V~kVvKGGS~gkGTaLr~~SDvDlVvFls--   82 (200)
T d1px5a2           9 RDLDKFIEDHLLPNTCFRTQ----VKEAIDIVCRFLKERCFQGTADPVRVSKVVKGGSSGKGTTLRGRSDADLVVFLT--   82 (200)
T ss_dssp             GGHHHHHHHHTSCCHHHHHH----HHHHHHHHHHHHHHHTTCC---CCEEEEEEEEEEC--------CEEEEEEEEEE--
T ss_pred             HHHHHHHHHHcCCCHHHHHH----HHHHHHHHHHHHHHHhcccCCCCceEEEEEeccccCCCcccCCCCcceEEEEec--
Confidence            47899999999998866555    4455555556666543     445532 67799999999888889999999999  


Q ss_pred             CccccccCCCCCceeeeeecCCCCCchhhhHHHhhcCCCcCHHHHHHHHHHHHHHHHHhcccCCceee----ecCCCeeE
Q psy6182          90 GELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKM----IADTTEVK  165 (323)
Q Consensus        90 ~~~~~~~~~~~pG~~~l~l~d~~~~~~~~w~~~~~~~g~Ls~~kv~~~F~~lv~~ai~~~~~~~~~~~----~~~~~a~t  165 (323)
                      ++-+|.+                   ...+.           ..+++..++.+..........-.+.+    .+..-+++
T Consensus        83 ~l~sf~d-------------------q~~~~-----------~e~i~ei~~~L~~~~~~~~~~~~~e~~~~~~~~pral~  132 (200)
T d1px5a2          83 KLTSFED-------------------QLRRR-----------GEFIQEIRRQLEACQREQKFKVTFEVQSPRRENPRALS  132 (200)
T ss_dssp             SCSCTTH-------------------HHHTH-----------HHHHHHHHHHHHHHHHHCCCSSEEEECCC------CCE
T ss_pred             CCCchHH-------------------HHHHH-----------HHHHHHHHHHHHHHHhccccCceEEEeecCccCCcEEE
Confidence            3222211                   01111           12445555555555444444333322    12234555


Q ss_pred             EEEc-----eEEEEEEEEEEEeCC
Q psy6182         166 LRIR-----ERYIVQITPSFKCGG  184 (323)
Q Consensus       166 l~v~-----~~isvdlvPav~~~~  184 (323)
                      ..+.     ..|+||++||+..=+
T Consensus       133 F~l~~~~~~~~v~vDvLPA~daLg  156 (200)
T d1px5a2         133 FVLSSPQLQQEVEFDVLPAFDALG  156 (200)
T ss_dssp             EEEEETTTTEEEEEEEEEEECSSC
T ss_pred             EEEEEcCCCCcEEEEeeEhhhhhc
Confidence            5554     589999999997665



>d1r89a2 d.218.1.7 (A:1-142) tRNA nucleotidyltransferase, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure