Psyllid ID: psy6182
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| 328714729 | 378 | PREDICTED: protein mab-21-like [Acyrthos | 0.984 | 0.841 | 0.839 | 1e-162 | |
| 91080531 | 365 | PREDICTED: similar to cell fate determin | 0.984 | 0.871 | 0.839 | 1e-162 | |
| 332374600 | 365 | unknown [Dendroctonus ponderosae] | 0.984 | 0.871 | 0.836 | 1e-161 | |
| 383855626 | 365 | PREDICTED: protein mab-21-like [Megachil | 0.984 | 0.871 | 0.823 | 1e-161 | |
| 66511238 | 365 | PREDICTED: protein mab-21-like isoform 1 | 0.984 | 0.871 | 0.820 | 1e-161 | |
| 340715024 | 365 | PREDICTED: protein mab-21-like [Bombus t | 0.984 | 0.871 | 0.817 | 1e-160 | |
| 156554286 | 365 | PREDICTED: protein mab-21-like [Nasonia | 0.984 | 0.871 | 0.820 | 1e-160 | |
| 242001058 | 365 | cell fate determining protein mab21l2, p | 0.984 | 0.871 | 0.811 | 1e-160 | |
| 157117931 | 365 | cell fate determining protein mab21l2 [A | 0.984 | 0.871 | 0.817 | 1e-158 | |
| 347964992 | 365 | AGAP001034-PA [Anopheles gambiae str. PE | 0.984 | 0.871 | 0.814 | 1e-158 |
| >gi|328714729|ref|XP_003245435.1| PREDICTED: protein mab-21-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/318 (83%), Positives = 293/318 (92%)
Query: 1 MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFIS 60
MLVP DM++AQ+K+ YQL K++ ERV RK + KTIREVCKVVQDVLREVE QEPRFIS
Sbjct: 14 MLVPQDMLSAQTKMSYQLGKFWAERVMVRKTAAVKTIREVCKVVQDVLREVEAQEPRFIS 73
Query: 61 SLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWV 120
SL ECNGR+EGLDV++PTEFE+VLYLNQMG LNFVDDGSLPGCAVLKLSDGRKRSMSLWV
Sbjct: 74 SLVECNGRYEGLDVVSPTEFEIVLYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWV 133
Query: 121 EFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSF 180
EFITASGYLSARK+RSRFQTLVAQACDKCAYRDSVKMIADT+EVKLRIRERY+VQITPSF
Sbjct: 134 EFITASGYLSARKIRSRFQTLVAQACDKCAYRDSVKMIADTSEVKLRIRERYVVQITPSF 193
Query: 181 KCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSF 240
KC GIWPRS+ HWPLPQIPWPHPNLV E KTEG DLLSKEC + GKQSA+EGDAWVMSF
Sbjct: 194 KCAGIWPRSSAHWPLPQIPWPHPNLVAEVKTEGFDLLSKECVTLHGKQSALEGDAWVMSF 253
Query: 241 TDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDES 300
DVE++L+ GGCRK+CLS+LKTLRDRHL+LPGNPVTNYH+KTLLLYECEKHP E+EWDE
Sbjct: 254 VDVENRLMYGGCRKRCLSVLKTLRDRHLDLPGNPVTNYHIKTLLLYECEKHPLEMEWDEP 313
Query: 301 CLGDRINGILLQLISCLR 318
CL DRINGILLQLISCL+
Sbjct: 314 CLSDRINGILLQLISCLQ 331
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91080531|ref|XP_966681.1| PREDICTED: similar to cell fate determining protein mab21l2 [Tribolium castaneum] gi|270005805|gb|EFA02253.1| hypothetical protein TcasGA2_TC007916 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|332374600|gb|AEE62441.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
| >gi|383855626|ref|XP_003703311.1| PREDICTED: protein mab-21-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|66511238|ref|XP_623075.1| PREDICTED: protein mab-21-like isoform 1 [Apis mellifera] gi|380019983|ref|XP_003693878.1| PREDICTED: protein mab-21-like isoform 1 [Apis florea] gi|380019985|ref|XP_003693879.1| PREDICTED: protein mab-21-like isoform 2 [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|340715024|ref|XP_003396021.1| PREDICTED: protein mab-21-like [Bombus terrestris] gi|350417195|ref|XP_003491303.1| PREDICTED: protein mab-21-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|156554286|ref|XP_001600392.1| PREDICTED: protein mab-21-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|242001058|ref|XP_002435172.1| cell fate determining protein mab21l2, putative [Ixodes scapularis] gi|215498502|gb|EEC07996.1| cell fate determining protein mab21l2, putative [Ixodes scapularis] | Back alignment and taxonomy information |
|---|
| >gi|157117931|ref|XP_001653106.1| cell fate determining protein mab21l2 [Aedes aegypti] gi|122114992|sp|Q0IES8.1|MAB21_AEDAE RecName: Full=Protein mab-21 gi|108875901|gb|EAT40126.1| AAEL008118-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|347964992|ref|XP_560259.3| AGAP001034-PA [Anopheles gambiae str. PEST] gi|387912899|sp|Q5TW90.3|MAB21_ANOGA RecName: Full=Protein mab-21 gi|333466573|gb|EAL41690.3| AGAP001034-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 323 | ||||||
| UNIPROTKB|Q29H56 | 365 | mab-21 "Protein mab-21" [Droso | 0.984 | 0.871 | 0.808 | 2.8e-144 | |
| FB|FBgn0029003 | 365 | mab-21 "mab-21" [Drosophila me | 0.984 | 0.871 | 0.801 | 2e-143 | |
| UNIPROTKB|Q9Y586 | 359 | MAB21L2 "Protein mab-21-like 2 | 0.965 | 0.869 | 0.798 | 1.1e-137 | |
| UNIPROTKB|G3MXA1 | 359 | MAB21L2 "Uncharacterized prote | 0.965 | 0.869 | 0.794 | 2.2e-137 | |
| UNIPROTKB|E2R6I8 | 359 | MAB21L2 "Uncharacterized prote | 0.965 | 0.869 | 0.794 | 2.2e-137 | |
| UNIPROTKB|F2Z5C6 | 359 | MAB21L2 "Uncharacterized prote | 0.965 | 0.869 | 0.794 | 2.2e-137 | |
| MGI|MGI:1346022 | 359 | Mab21l2 "mab-21-like 2 (C. ele | 0.965 | 0.869 | 0.794 | 2.2e-137 | |
| RGD|1595520 | 359 | Mab21l2 "mab-21-like 2 (C. ele | 0.965 | 0.869 | 0.794 | 2.2e-137 | |
| ZFIN|ZDB-GENE-020516-1 | 359 | mab21l1 "mab-21-like 1" [Danio | 0.965 | 0.869 | 0.785 | 3.6e-137 | |
| UNIPROTKB|Q8AY65 | 359 | MAB21L1 "Protein mab-21-like 1 | 0.965 | 0.869 | 0.788 | 9.5e-137 |
| UNIPROTKB|Q29H56 mab-21 "Protein mab-21" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 257/318 (80%), Positives = 292/318 (91%)
Query: 1 MLVPSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFIS 60
MLVPSDM+AAQSK++YQ+NKY +RVQ RKA I K I+EVC++VQDVL+EVEVQEPRFIS
Sbjct: 1 MLVPSDMIAAQSKMVYQMNKYCADRVQVRKAQIHKQIQEVCRIVQDVLKEVEVQEPRFIS 60
Query: 61 SLTECNGRFEGLDVITPTEFEVVLYLNQMGELNFVDDGSLPGCAVLKLSDGRKRSMSLWV 120
SL + NGRFEGL+VI+PTEFE+++YLNQMG LNFVDDG+LPGCAVLKLSDGRKRSMSLWV
Sbjct: 61 SLNDYNGRFEGLEVISPTEFEIIIYLNQMGVLNFVDDGTLPGCAVLKLSDGRKRSMSLWV 120
Query: 121 EFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMIADTTEVKLRIRERYIVQITPSF 180
EFITASGYLSARK+RSRFQTLVAQACDKCAYRD VKMIADTTEVKLRIRER IVQITP+F
Sbjct: 121 EFITASGYLSARKIRSRFQTLVAQACDKCAYRDIVKMIADTTEVKLRIRERIIVQITPAF 180
Query: 181 KCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSF 240
KC G+WPRSA HWPLP IPWPHPN+V E KTEG D+LSKEC A+QGK SAMEGDAWV+SF
Sbjct: 181 KCAGLWPRSASHWPLPGIPWPHPNIVAEVKTEGFDMLSKECIALQGKNSAMEGDAWVLSF 240
Query: 241 TDVESKLLIGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELEWDES 300
TD E++LL G R++CLSILKTLRDRHL+LPGNPVT+YH+KTLLLYECEKHP E+EW+E+
Sbjct: 241 TDAENRLLQGASRRRCLSILKTLRDRHLDLPGNPVTSYHLKTLLLYECEKHPREMEWEEN 300
Query: 301 CLGDRINGILLQLISCLR 318
C+ DRINGI LQLISCL+
Sbjct: 301 CIADRINGIFLQLISCLQ 318
|
|
| FB|FBgn0029003 mab-21 "mab-21" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9Y586 MAB21L2 "Protein mab-21-like 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3MXA1 MAB21L2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R6I8 MAB21L2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F2Z5C6 MAB21L2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1346022 Mab21l2 "mab-21-like 2 (C. elegans)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1595520 Mab21l2 "mab-21-like 2 (C. elegans)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-020516-1 mab21l1 "mab-21-like 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8AY65 MAB21L1 "Protein mab-21-like 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| pfam03281 | 288 | pfam03281, Mab-21, Mab-21 protein | 8e-94 |
| >gnl|CDD|217473 pfam03281, Mab-21, Mab-21 protein | Back alignment and domain information |
|---|
Score = 280 bits (717), Expect = 8e-94
Identities = 116/262 (44%), Positives = 161/262 (61%), Gaps = 19/262 (7%)
Query: 67 GRFEGLDVITPTEFEVVLYLNQMGELN--FVDDGSLPGCAVLKLSDGRKRSMSLWVEFIT 124
+EGL V++P EF+V++ LN G D G PG A+LKLS R SL E++T
Sbjct: 1 SYYEGLKVLSPNEFDVMIPLNGEGVFKKVLEDRGRPPGYALLKLSS---RDPSLLDEWLT 57
Query: 125 -ASGYLSARKMRSRFQTLVAQACDKCAYRD--SVKMIADTTEVKLRIRE---RYIVQITP 178
A GYLS +K+ SRF LV++A +K +Y D + + V L + E +Y V + P
Sbjct: 58 CADGYLSPKKVLSRFLKLVSRAVNKLSYSDVIVESLEPNGPAVTLAVEEDGLQYSVDLVP 117
Query: 179 SFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVM 238
+F+C G WP SA WP WP P L+ E K+EG L+ K K+++ +GD W +
Sbjct: 118 AFECPGGWPESAQEWPRRSRRWPSPELIEEIKSEGFHLVPKPS-----KKNSKDGDEWRL 172
Query: 239 SFTDVESKLL--IGGCRKKCLSILKTLRDRHLELPGNPVTNYHMKTLLLYECEKHPNELE 296
SF+ E LL IGGCR+KCL ILK LR+ L P + +++YH+KTLLL+ECEKHP + +
Sbjct: 173 SFSQAEKALLANIGGCRRKCLRILKYLREVELGPP-SVISSYHLKTLLLWECEKHPEDSD 231
Query: 297 WDESCLGDRINGILLQLISCLR 318
WDES LGDR+ G+L +L+ CLR
Sbjct: 232 WDESNLGDRLLGLLDELVKCLR 253
|
This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development. Length = 288 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| KOG3963|consensus | 382 | 100.0 | ||
| PF03281 | 292 | Mab-21: Mab-21 protein | 100.0 | |
| cd05400 | 143 | NT_2-5OAS_ClassI-CCAase Nucleotidyltransferase (NT | 95.07 | |
| PRK13300 | 447 | tRNA CCA-pyrophosphorylase; Provisional | 94.49 | |
| TIGR03671 | 408 | cca_archaeal CCA-adding enzyme. | 93.56 |
| >KOG3963|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-67 Score=486.11 Aligned_cols=314 Identities=69% Similarity=1.170 Sum_probs=293.2
Q ss_pred hhHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCccccc-ccccccCcccceecCCCceEEEEE
Q psy6182 7 MMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQEPRFISS-LTECNGRFEGLDVITPTEFEVVLY 85 (323)
Q Consensus 7 ~~~~~~~~~~~L~~~~~~~v~~~~~~~~~~~~~v~~iv~~ll~~v~~~d~~F~~~-l~~~Gs~ye~lkv~~pdefdl~vp 85 (323)
|++++++..++++.||.++++++.++++++.+.+.++|+++++++..+|+||+.. -..+|.++||+++.+|.+|.+.+|
T Consensus 1 m~~l~~~~v~~~~~~~~~rvqlr~~q~~~~i~ev~kvVq~l~~ev~~qe~rf~as~~~~~g~~~e~ldvl~p~~~~~~~~ 80 (382)
T KOG3963|consen 1 MIALQQKTVYQLNRYLDERVQLRKAQIAKTIREVLKVVQDLLKEVEVQEPRFIASLSERTGGRFEGLDVLSPSEFETVLY 80 (382)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHhHHhHHHHHHHHHHHHHHhhccccCcceeccCCCccCcccCCeeEechhHhCCeee
Confidence 7899999999999999999999999999999999999999999999999999976 356889999999999999999999
Q ss_pred ec----------cCCccccccCCCCCceeeeeec--------CCCCCchhhhHH-HhhcCCCcCHHHHHHHHHHHHHHHH
Q psy6182 86 LN----------QMGELNFVDDGSLPGCAVLKLS--------DGRKRSMSLWVE-FITASGYLSARKMRSRFQTLVAQAC 146 (323)
Q Consensus 86 L~----------~~~~~~~~~~~~~pG~~~l~l~--------d~~~~~~~~w~~-~~~~~g~Ls~~kv~~~F~~lv~~ai 146 (323)
|+ +++.++|+++|+.+||+.++++ ++++++++.|.+ |.+++||++|.||++||+.+|.+|+
T Consensus 81 l~~l~~~r~~~~Q~~v~~~~~dgtl~~C~~~~Ls~~~~~e~t~~~~rS~~~wve~~~sas~~~~~~kv~~~F~~lv~~al 160 (382)
T KOG3963|consen 81 LNFLLLVRALKLQMGVFNFVDDGTLPGCAVLKLSLRLFDEGTDGRKRSMSLWVEHFNSASGYLSPAKVLSRFRTLVAQAL 160 (382)
T ss_pred chhhhcchhHHHhhcccccccccccCCCCccchhhhhhhhhhhhhhhhHHHHHHhhcccccccCCHHHHHHHHHHHHHHH
Confidence 99 8889999999999999989887 788899999998 8889999999999999999999999
Q ss_pred HhcccCCceeeecCCCeeEEEEce---EEEEEEEEEEEeCCCCCccCCCCCCCCCCCCCccccccccccceeEeeCcccc
Q psy6182 147 DKCAYRDSVKMIADTTEVKLRIRE---RYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAA 223 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~~a~tl~v~~---~isvdlvPav~~~~~Wp~~a~~w~~~~~~wp~~~~~~~~~~~g~~lvpk~~~~ 223 (323)
.+|.+++.+.++.++.++++.+.. ++.++|||||+++|+||++|.+||.+..+||++.++++||++||||+|+....
T Consensus 161 ~~c~~~~qv~Ml~~~~vvk~~~~~~~~~~~~eivPav~~~g~Wp~~A~~wpl~~~~WP~~~~~~evks~GF~ll~~~cs~ 240 (382)
T KOG3963|consen 161 DKCQLSDQVKMLGDTSVVKLRIRESIYRMLVEIVPAVHCPGIWPRSAAHWPLEHIPWPGPNRVEEVKSEGFNLLSKECSI 240 (382)
T ss_pred HHHhhccccccccchHHHHHHHHHHHHHHHHhhcceeecCCCCchhhhhCccccCCCCcHHHHHHHHhccccccchhhhh
Confidence 999999999998888898888774 56699999999999999999999999999999999999999999999955432
Q ss_pred ccCcCCCcccCccccchHHHHHHHHccCChHHHHHHHHHHHHhcCCCCCCC-CChHHHHHHHHHHHHhCCCCCCCCcccH
Q psy6182 224 MQGKQSAMEGDAWVMSFTDVESKLLIGGCRKKCLSILKTLRDRHLELPGNP-VTNYHMKTLLLYECEKHPNELEWDESCL 302 (323)
Q Consensus 224 ~~~~~~~~~~~~WrlSF~~~E~~ll~~~~r~~cl~ilK~L~~~~l~~~g~~-LtsyhLKTvlL~~~~~~p~~~~W~~~~L 302 (323)
.++++++.++.||+||..+|..+.++|||++|++|||.|++.+..+||++ +|+|||||++||+||++|+++||+++.+
T Consensus 241 -~~~kn~~~~~~Wrl~f~~aE~~L~~gg~rrk~~qi~k~Lr~~~id~pg~p~it~yhLkt~mlw~CEkhp~~~dW~E~~~ 319 (382)
T KOG3963|consen 241 -KQGKNSMEEDAWRLSFAEAENRLEKGGCRRKCLQILKTLRDRHIDLPGNPKITNYHLKTLLLWECEKHPREYDWQEDCL 319 (382)
T ss_pred -hhccCCcchhhHHHhhHHHHHHHHhcchHHHHHHHHHHHHHHHccCCCCCcccHHHHHHHHHHHHhhCccccccchhHH
Confidence 23345588899999999999999999999999999999999998889977 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy6182 303 GDRINGILLQLISCLRMLF 321 (323)
Q Consensus 303 ~~rl~~lL~~L~~cL~~~~ 321 (323)
++||++++++|++||++=+
T Consensus 320 ~~rl~gii~~L~~CL~~r~ 338 (382)
T KOG3963|consen 320 GDRLLGIILQLISCLQCRR 338 (382)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998743
|
|
| >PF03281 Mab-21: Mab-21 protein | Back alignment and domain information |
|---|
| >cd05400 NT_2-5OAS_ClassI-CCAase Nucleotidyltransferase (NT) domain of 2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I CCA-adding enzyme | Back alignment and domain information |
|---|
| >PRK13300 tRNA CCA-pyrophosphorylase; Provisional | Back alignment and domain information |
|---|
| >TIGR03671 cca_archaeal CCA-adding enzyme | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 323 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 6e-06
Identities = 47/341 (13%), Positives = 98/341 (28%), Gaps = 104/341 (30%)
Query: 4 PSDMMAAQSKILYQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREV------------ 51
P ++ K+LYQ++ + R + + I+ +Q LR +
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSR-----SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 52 --EVQEPRFISSL---------TECNGRFEGLDVITPTEFEVV-----LYLNQMGEL--N 93
VQ + ++ T + L T T + L +++ L
Sbjct: 250 LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 94 FVD--DGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAY 151
++D LP + R +S+ E I R + + CDK
Sbjct: 310 YLDCRPQDLPREVL----TTNPRRLSIIAESI--------RDGLATWDNWKHVNCDK--L 355
Query: 152 RDSVKMIADTTEVKLRIRERYIVQITPSFKCGGIWPRSAGHWPLP----QIPWPHPNLVV 207
++ + E R+ + ++P SA +P + W
Sbjct: 356 TTIIESSLNVLEPAE-YRKMFD-----RL---SVFPPSA---HIPTILLSLIWF------ 397
Query: 208 ETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFT--DVESKLLIGGCRKKCLSILKTLRD 265
+ ++ + K S +E + + + +L + K + L
Sbjct: 398 DVIKSDVMVVVNKLH----KYSLVEKQPKESTISIPSIYLEL-----KVKLEN-EYALHR 447
Query: 266 RHLE------------LPGNPVTNY-------HMKTLLLYE 287
++ L + Y H+K + E
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| 1px5_A | 349 | 2'-5'-oligoadenylate synthetase 1; 5-stranded anti | 98.45 | |
| 1r89_A | 437 | TRNA nucleotidyltransferase; CCA adding enzyme, in | 94.7 |
| >1px5_A 2'-5'-oligoadenylate synthetase 1; 5-stranded antiparalel beta sheet, four helix bundle, transferase; HET: YCM; 1.74A {Sus scrofa} SCOP: a.160.1.2 d.218.1.6 | Back alignment and structure |
|---|
Probab=98.45 E-value=7.4e-06 Score=77.70 Aligned_cols=243 Identities=10% Similarity=0.162 Sum_probs=140.6
Q ss_pred HHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcC-Ccccc-cccccccCcccceecCCCceEEEEEeccCCccc
Q psy6182 16 YQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQE-PRFIS-SLTECNGRFEGLDVITPTEFEVVLYLNQMGELN 93 (323)
Q Consensus 16 ~~L~~~~~~~v~~~~~~~~~~~~~v~~iv~~ll~~v~~~d-~~F~~-~l~~~Gs~ye~lkv~~pdefdl~vpL~~~~~~~ 93 (323)
.+|+.|..++|+..++++.++.+.+..|...|-+...... ..+.. .+...|||--|..+..-...||+|.|. ..-
T Consensus 9 ~~l~~fi~~~l~p~~~~~~~i~~~~~~I~~~L~~~~~~~~~~~~~v~~v~~~GSyargT~lrg~sDiDlvV~l~--~~~- 85 (349)
T 1px5_A 9 RDLDKFIEDHLLPNTXFRTQVKEAIDIVXRFLKERCFQGTADPVRVSKVVKGGSSGKGTTLRGRSDADLVVFLT--KLT- 85 (349)
T ss_dssp GGHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEEEEEC--------CEEEEEEEEEE--SCS-
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhhcccccCCcceEEEEEecCcCCCcccCCCCceeEEEEEC--CCC-
Confidence 4689999999999988888766655555544433321111 01322 356789999999988778899888887 110
Q ss_pred cccCCCCCceeeeeecCCCCCchhhhHHHhhcCCCcCHHHHHHHHHHHHHHHHHhcccCCceeee----cCCCeeEEEEc
Q psy6182 94 FVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKMI----ADTTEVKLRIR 169 (323)
Q Consensus 94 ~~~~~~~pG~~~l~l~d~~~~~~~~w~~~~~~~g~Ls~~kv~~~F~~lv~~ai~~~~~~~~~~~~----~~~~a~tl~v~ 169 (323)
+.+.+.+ ...++++.+++.+.+.-..-.+...+.+. ...-++++.+.
T Consensus 86 ---------------------~~~~~~~--------~~~~~l~~i~~~L~~~~~~~~~~~~~ev~~~~~~~p~~v~~~~~ 136 (349)
T 1px5_A 86 ---------------------SFEDQLR--------RRGEFIQEIRRQLEACQREQKFKVTFEVQSPRRENPRALSFVLS 136 (349)
T ss_dssp ---------------------CTTHHHH--------THHHHHHHHHHHHHHHHHHCCCSSEEEECCC------CCEEEEE
T ss_pred ---------------------chhhHHh--------hHHHHHHHHHHHHHHhhhhhccccceeEecccccCCceEEEEEE
Confidence 0111111 12467777777776655443333223221 12335777774
Q ss_pred -----eEEEEEEEEEEEeCCCCCccCCCCCCCCCCCCCccccccccccceeEeeCccccccCcCCCcccCccccchHHHH
Q psy6182 170 -----ERYIVQITPSFKCGGIWPRSAGHWPLPQIPWPHPNLVVETKTEGCDLLSKECAAMQGKQSAMEGDAWVMSFTDVE 244 (323)
Q Consensus 170 -----~~isvdlvPav~~~~~Wp~~a~~w~~~~~~wp~~~~~~~~~~~g~~lvpk~~~~~~~~~~~~~~~~WrlSF~~~E 244 (323)
..+.||+|||+..-+.. .....|++..... +++..... .....|..+|+...
T Consensus 137 ~~~~~~~~~vDVvPa~~~l~~~---------~~~~~~~~~~y~~-------li~~~~~~-------~~~g~~~~~~~~~h 193 (349)
T 1px5_A 137 SPQLQQEVEFDVLPAFDALGQW---------TPGYKPNPEIYVQ-------LIKECKSR-------GKEGEFSTCFTELQ 193 (349)
T ss_dssp ETTTTEEEEEEEEEEECSSCSC---------CTTSCCCHHHHHH-------HHHHHHHH-------TCTTTTGGGGHHHH
T ss_pred ccCcCCceEEEEEEehhhhccc---------ccccCCChHHHHH-------HHhhcccc-------ccCccchhcCHHHH
Confidence 47999999999743210 0111233321110 22111000 12347999999988
Q ss_pred HHHHc--cCChHHHHHHHHHHHHhc-CCCCCCCCChHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHH
Q psy6182 245 SKLLI--GGCRKKCLSILKTLRDRH-LELPGNPVTNYHMKTLLLYECEKHPNELEWDESCLGDRINGILLQLISC 316 (323)
Q Consensus 245 ~~ll~--~~~r~~cl~ilK~L~~~~-l~~~g~~LtsyhLKTvlL~~~~~~p~~~~W~~~~L~~rl~~lL~~L~~c 316 (323)
...++ ++..+..+|++|..+... .+..+..++||.|..+..++.+..+... +-++++.|..+|..+.+.
T Consensus 194 ~~~v~~~~~~~k~lIRLlK~W~~~~~~~~~~~~~ssy~lELL~~~a~e~~~~~~---~~~~~~~f~~vle~l~~~ 265 (349)
T 1px5_A 194 RDFLRNRPTKLKSLIRLVKHWYQTCKKTHGNKLPPQYALELLTVYAWEQGSRKT---DFSTAQGFQTVLELVLKH 265 (349)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHHHHHTCCS---SCCHHHHHHHHHHHHHTG
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHhhhcccCCCCChHHHHHHHHHHHHhCCCcc---CCCHHHHHHHHHHHHHhC
Confidence 88887 334478999999999864 2222336999999999999999865443 345788899988877653
|
| >1r89_A TRNA nucleotidyltransferase; CCA adding enzyme, incoming nucleotide, nucleotidyltransfera superfamily; HET: CTP; 1.80A {Archaeoglobus fulgidus} SCOP: a.160.1.3 d.218.1.7 d.58.16.2 PDB: 1r8a_A 1r8b_A* 1r8c_A* 1sz1_A* 1tfw_A* 1tfy_A* 1uet_A 1ueu_A* 1uev_A* 2dr5_A 2dr7_A 2dr8_A* 2dr9_A 2dra_A* 2drb_A 2dvi_A* 2zh1_A 2zh2_A 2zh3_A 2zh4_A ... | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 323 | |||
| d1px5a2 | 200 | 2'-5'-oligoadenylate synthetase 1, OAS1, N-termina | 96.65 | |
| d1r89a2 | 142 | tRNA nucleotidyltransferase, N-terminal domain {Ar | 91.87 |
| >d1px5a2 d.218.1.6 (A:1-200) 2'-5'-oligoadenylate synthetase 1, OAS1, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Nucleotidyltransferase superfamily: Nucleotidyltransferase family: 2'-5'-oligoadenylate synthetase 1, OAS1, N-terminal domain domain: 2'-5'-oligoadenylate synthetase 1, OAS1, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.65 E-value=0.0078 Score=50.34 Aligned_cols=133 Identities=11% Similarity=0.166 Sum_probs=74.3
Q ss_pred HHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHhcC-----Cccccc-ccccccCcccceecCCCceEEEEEeccC
Q psy6182 16 YQLNKYYGERVQTRKASIAKTIREVCKVVQDVLREVEVQE-----PRFISS-LTECNGRFEGLDVITPTEFEVVLYLNQM 89 (323)
Q Consensus 16 ~~L~~~~~~~v~~~~~~~~~~~~~v~~iv~~ll~~v~~~d-----~~F~~~-l~~~Gs~ye~lkv~~pdefdl~vpL~~~ 89 (323)
..|+.|..++++..++-..+ +.+.|+.|...++.++ +.+... +..+||+..|.-+..-.+.|++|.|.
T Consensus 9 ~~Ld~fI~~~Lqp~~~f~~~----~~~avd~i~~fLke~cf~~~~~~v~V~kVvKGGS~gkGTaLr~~SDvDlVvFls-- 82 (200)
T d1px5a2 9 RDLDKFIEDHLLPNTCFRTQ----VKEAIDIVCRFLKERCFQGTADPVRVSKVVKGGSSGKGTTLRGRSDADLVVFLT-- 82 (200)
T ss_dssp GGHHHHHHHHTSCCHHHHHH----HHHHHHHHHHHHHHHTTCC---CCEEEEEEEEEEC--------CEEEEEEEEEE--
T ss_pred HHHHHHHHHHcCCCHHHHHH----HHHHHHHHHHHHHHHhcccCCCCceEEEEEeccccCCCcccCCCCcceEEEEec--
Confidence 47899999999998866555 4455555556666543 445532 67799999999888889999999999
Q ss_pred CccccccCCCCCceeeeeecCCCCCchhhhHHHhhcCCCcCHHHHHHHHHHHHHHHHHhcccCCceee----ecCCCeeE
Q psy6182 90 GELNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKMRSRFQTLVAQACDKCAYRDSVKM----IADTTEVK 165 (323)
Q Consensus 90 ~~~~~~~~~~~pG~~~l~l~d~~~~~~~~w~~~~~~~g~Ls~~kv~~~F~~lv~~ai~~~~~~~~~~~----~~~~~a~t 165 (323)
++-+|.+ ...+. ..+++..++.+..........-.+.+ .+..-+++
T Consensus 83 ~l~sf~d-------------------q~~~~-----------~e~i~ei~~~L~~~~~~~~~~~~~e~~~~~~~~pral~ 132 (200)
T d1px5a2 83 KLTSFED-------------------QLRRR-----------GEFIQEIRRQLEACQREQKFKVTFEVQSPRRENPRALS 132 (200)
T ss_dssp SCSCTTH-------------------HHHTH-----------HHHHHHHHHHHHHHHHHCCCSSEEEECCC------CCE
T ss_pred CCCchHH-------------------HHHHH-----------HHHHHHHHHHHHHHHhccccCceEEEeecCccCCcEEE
Confidence 3222211 01111 12445555555555444444333322 12234555
Q ss_pred EEEc-----eEEEEEEEEEEEeCC
Q psy6182 166 LRIR-----ERYIVQITPSFKCGG 184 (323)
Q Consensus 166 l~v~-----~~isvdlvPav~~~~ 184 (323)
..+. ..|+||++||+..=+
T Consensus 133 F~l~~~~~~~~v~vDvLPA~daLg 156 (200)
T d1px5a2 133 FVLSSPQLQQEVEFDVLPAFDALG 156 (200)
T ss_dssp EEEEETTTTEEEEEEEEEEECSSC
T ss_pred EEEEEcCCCCcEEEEeeEhhhhhc
Confidence 5554 589999999997665
|
| >d1r89a2 d.218.1.7 (A:1-142) tRNA nucleotidyltransferase, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|