Psyllid ID: psy6190


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80-------
MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVRLTSMNGRSTTHLYSRSNHNR
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEHEEHHHHHHHHHHHHHHHHHEEcccccEEcccccccc
cccHEHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEcccccccc
MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGIstisdahvcwtcdvdrpykYVIEEVWTVRLtsmngrstthlysrsnhnr
mknyveanishkshttVKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVrltsmngrstthlysrsnhnr
MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVRLTSMNGRSTTHLYSRSNHNR
****************VKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVRLTSM****************
*KNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVRLTSMNGRSTTHL*S******
MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVRLTSMNGRSTT**********
*KNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVRLTSMNGRSTTHLYSR*****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHVCWTCDVDRPYKYVIEEVWTVRLTSMNGRSTTHLYSRSNHNR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query87 2.2.26 [Sep-21-2011]
P26431 820 Sodium/hydrogen exchanger yes N/A 0.517 0.054 0.688 6e-13
P23791 816 Sodium/hydrogen exchanger yes N/A 0.517 0.055 0.688 6e-13
P48762 818 Sodium/hydrogen exchanger yes N/A 0.517 0.055 0.688 6e-13
Q61165 820 Sodium/hydrogen exchanger yes N/A 0.517 0.054 0.688 6e-13
P19634 815 Sodium/hydrogen exchanger yes N/A 0.517 0.055 0.688 6e-13
P48761 822 Sodium/hydrogen exchanger yes N/A 0.517 0.054 0.688 6e-13
Q28036 817 Sodium/hydrogen exchanger yes N/A 0.517 0.055 0.688 6e-13
Q01345 759 Na(+)/H(+) exchanger beta N/A N/A 0.563 0.064 0.64 4e-12
Q9Z0X2 898 Sodium/hydrogen exchanger no N/A 0.540 0.052 0.638 2e-11
P48763 813 Sodium/hydrogen exchanger no N/A 0.563 0.060 0.563 3e-11
>sp|P26431|SL9A1_RAT Sodium/hydrogen exchanger 1 OS=Rattus norvegicus GN=Slc9a1 PE=1 SV=2 Back     alignment and function desciption
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/45 (68%), Positives = 40/45 (88%)

Query: 1   MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAH 45
           M+ YVEANISHKSHTT+KY +KM SS SET+IF+FLG+ST++ +H
Sbjct: 367 MRPYVEANISHKSHTTIKYFLKMWSSVSETLIFIFLGVSTVAGSH 411




Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.
Rattus norvegicus (taxid: 10116)
>sp|P23791|SL9A1_RABIT Sodium/hydrogen exchanger 1 OS=Oryctolagus cuniculus GN=SLC9A1 PE=2 SV=1 Back     alignment and function description
>sp|P48762|SL9A1_PIG Sodium/hydrogen exchanger 1 OS=Sus scrofa GN=SLC9A1 PE=2 SV=1 Back     alignment and function description
>sp|Q61165|SL9A1_MOUSE Sodium/hydrogen exchanger 1 OS=Mus musculus GN=Slc9a1 PE=1 SV=1 Back     alignment and function description
>sp|P19634|SL9A1_HUMAN Sodium/hydrogen exchanger 1 OS=Homo sapiens GN=SLC9A1 PE=1 SV=2 Back     alignment and function description
>sp|P48761|SL9A1_CRIGR Sodium/hydrogen exchanger 1 OS=Cricetulus griseus GN=SLC9A1 PE=2 SV=1 Back     alignment and function description
>sp|Q28036|SL9A1_BOVIN Sodium/hydrogen exchanger 1 OS=Bos taurus GN=SLC9A1 PE=2 SV=1 Back     alignment and function description
>sp|Q01345|NHEB_ONCMY Na(+)/H(+) exchanger beta OS=Oncorhynchus mykiss PE=2 SV=1 Back     alignment and function description
>sp|Q9Z0X2|SL9A5_RAT Sodium/hydrogen exchanger 5 OS=Rattus norvegicus GN=Slc9a5 PE=1 SV=1 Back     alignment and function description
>sp|P48763|SL9A2_RAT Sodium/hydrogen exchanger 2 OS=Rattus norvegicus GN=Slc9a2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query87
17136073 582 sodium-hydrogen exchanger NHE2 precursor 0.977 0.146 0.494 4e-15
194766273 1282 GF21085 [Drosophila ananassae] gi|190617 0.977 0.066 0.494 8e-15
221510734 672 Na[+]/H[+] hydrogen exchanger 2, isoform 0.977 0.126 0.494 8e-15
242019593 1064 sodium/hydrogen exchanger, putative [Ped 0.517 0.042 0.866 9e-15
307213111 1090 Sodium/hydrogen exchanger 3 [Harpegnatho 0.517 0.041 0.866 9e-15
198476838 1416 GA21648 [Drosophila pseudoobscura pseudo 0.977 0.060 0.505 9e-15
322802306 1023 hypothetical protein SINV_10800 [Solenop 0.517 0.043 0.866 1e-14
332031580 1047 Sodium/hydrogen exchanger 3 [Acromyrmex 0.517 0.042 0.866 1e-14
195155419 1248 GL25889 [Drosophila persimilis] gi|19411 0.977 0.068 0.505 1e-14
221510738 723 Na[+]/H[+] hydrogen exchanger 2, isoform 0.977 0.117 0.494 1e-14
>gi|17136073|gb|AAL35394.1| sodium-hydrogen exchanger NHE2 precursor [Drosophila melanogaster] Back     alignment and taxonomy information
 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 1   MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHV--CWTCDVDRPYKY 58
           MKNYVE+NIS KSHTTVKYA+KMLSSS+ETIIFMFLG++T+++ HV   W   +   +  
Sbjct: 371 MKNYVESNISQKSHTTVKYALKMLSSSAETIIFMFLGVATVNNMHVWNTWFVVLTIAFCS 430

Query: 59  VIEEVWTVRLTSMNGRSTTHLYSRSNH 85
           V   +  + L+++  R   H  SR + 
Sbjct: 431 VFRVIGVILLSALANRFRLHKLSRVDQ 457




Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194766273|ref|XP_001965249.1| GF21085 [Drosophila ananassae] gi|190617859|gb|EDV33383.1| GF21085 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|221510734|ref|NP_001137848.1| Na[+]/H[+] hydrogen exchanger 2, isoform D [Drosophila melanogaster] gi|220902091|gb|ACL83054.1| Na[+]/H[+] hydrogen exchanger 2, isoform D [Drosophila melanogaster] gi|379699062|gb|AFD10753.1| FI19315p1 [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|242019593|ref|XP_002430244.1| sodium/hydrogen exchanger, putative [Pediculus humanus corporis] gi|212515351|gb|EEB17506.1| sodium/hydrogen exchanger, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|307213111|gb|EFN88633.1| Sodium/hydrogen exchanger 3 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|198476838|ref|XP_001357503.2| GA21648 [Drosophila pseudoobscura pseudoobscura] gi|198137871|gb|EAL34573.2| GA21648 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|322802306|gb|EFZ22702.1| hypothetical protein SINV_10800 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332031580|gb|EGI71052.1| Sodium/hydrogen exchanger 3 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|195155419|ref|XP_002018602.1| GL25889 [Drosophila persimilis] gi|194114755|gb|EDW36798.1| GL25889 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|221510738|ref|NP_001137850.1| Na[+]/H[+] hydrogen exchanger 2, isoform F [Drosophila melanogaster] gi|220902093|gb|ACL83056.1| Na[+]/H[+] hydrogen exchanger 2, isoform F [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms


Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P19634SL9A1_HUMANNo assigned EC number0.68880.51720.0552yesN/A
P35449NHX9_CAEELNo assigned EC number0.55550.51720.0674yesN/A
P26431SL9A1_RATNo assigned EC number0.68880.51720.0548yesN/A
P23791SL9A1_RABITNo assigned EC number0.68880.51720.0551yesN/A
Q61165SL9A1_MOUSENo assigned EC number0.68880.51720.0548yesN/A
P48762SL9A1_PIGNo assigned EC number0.68880.51720.0550yesN/A
P48761SL9A1_CRIGRNo assigned EC number0.68880.51720.0547yesN/A
Q28036SL9A1_BOVINNo assigned EC number0.68880.51720.0550yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query87
TIGR00840 559 TIGR00840, b_cpa1, sodium/hydrogen exchanger 3 5e-18
>gnl|CDD|233147 TIGR00840, b_cpa1, sodium/hydrogen exchanger 3 Back     alignment and domain information
 Score = 76.4 bits (188), Expect = 5e-18
 Identities = 29/45 (64%), Positives = 38/45 (84%)

Query: 1   MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAH 45
           MK YVEAN+S +S TT+KY MKMLSS SET+IF+FLG+S +++ H
Sbjct: 272 MKKYVEANMSRRSQTTIKYFMKMLSSLSETLIFIFLGVSLVTENH 316


The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36)The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals.Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in(1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles.This model is specific for the eukaryotic members members of this family [Transport and binding proteins, Cations and iron carrying compounds]. Length = 559

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 87
KOG1966|consensus 670 99.95
KOG1965|consensus 575 99.86
TIGR00840 559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.61
TIGR00831 525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 97.81
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 96.67
PRK05326 562 potassium/proton antiporter; Reviewed 93.19
>KOG1966|consensus Back     alignment and domain information
Probab=99.95  E-value=1.1e-29  Score=206.88  Aligned_cols=83  Identities=48%  Similarity=0.594  Sum_probs=81.4

Q ss_pred             CCccccccCCcchHHHHHHHHHHHHhhccchhheeeehhhccccceEE---------EEEehhH-----HHHHHhhhccc
Q psy6190           1 MKNYVEANISHKSHTTVKYAMKMLSSSSETIIFMFLGISTISDAHVCW---------TCDVDRP-----YKYVIEEVWTV   66 (87)
Q Consensus         1 m~hY~~~NlS~~S~~t~k~~~k~ls~~sEt~IFlyLG~s~~~~~~~W~---------~cl~~R~-----Lt~llN~fR~~   66 (87)
                      |++|+++|+|++|.+++||++||+|++||++||+|||+++++..|+||         ||+++|+     |||++|+||.+
T Consensus       304 m~~Yv~~Nis~~s~~tvky~~K~lss~sEt~IF~fLGvs~v~~~h~wd~~Fi~~T~~fc~~~R~lgv~~lt~~~N~fr~~  383 (670)
T KOG1966|consen  304 MKKYVEANISQKSATTVKYFMKMLSSLSETVIFMFLGVSTVSSNHHWDFAFICLTLVFCLIYRAIGVVVLTWFLNKFRMV  383 (670)
T ss_pred             HHHHHhcccchHHHHHHHHHHHHHHhccchhhheeehhhhcCCcceeehhhhhhHHHHHHHHHHHHhhhhhhhhhhhhee
Confidence            789999999999999999999999999999999999999999999999         8999999     99999999999


Q ss_pred             CCCCCceEEEEeccccC
Q psy6190          67 RLTSMNGRSTTHLYSRS   83 (87)
Q Consensus        67 kI~~~dQ~im~y~~~~~   83 (87)
                      |++++||+||+|||.|.
T Consensus       384 k~~~~DQfimsyGGLRG  400 (670)
T KOG1966|consen  384 KLEFVDQFIMSYGGLRG  400 (670)
T ss_pred             eccccceeeeecCCcch
Confidence            99999999999999995



>KOG1965|consensus Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query87
2kbv_A28 Sodium/hydrogen exchanger 1; transmembrane, peptid 95.98
>2kbv_A Sodium/hydrogen exchanger 1; transmembrane, peptide, NHE1, micelle, alternative splicing, antiport, glycoprotein, ION transport, membrane; NMR {Synthetic} Back     alignment and structure
Probab=95.98  E-value=0.00018  Score=36.99  Aligned_cols=14  Identities=7%  Similarity=-0.287  Sum_probs=11.8

Q ss_pred             CCceEEEEeccccC
Q psy6190          70 SMNGRSTTHLYSRS   83 (87)
Q Consensus        70 ~~dQ~im~y~~~~~   83 (87)
                      .+||+||||||.|-
T Consensus         1 ~~~Q~i~~~~GLRG   14 (28)
T 2kbv_A            1 XKDQFIIAYGGLRG   14 (28)
T ss_dssp             -CHHHHTTTTSSCH
T ss_pred             CCceeEEEeecchH
Confidence            36999999999983




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00