Psyllid ID: psy6222
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 863 | 2.2.26 [Sep-21-2011] | |||||||
| Q8WXR4 | 1341 | Myosin-IIIb OS=Homo sapie | no | N/A | 0.580 | 0.373 | 0.285 | 5e-54 | |
| Q9U1M8 | 2357 | Myosin-I heavy chain OS=D | yes | N/A | 0.564 | 0.206 | 0.300 | 1e-53 | |
| Q1EG27 | 1305 | Myosin-IIIb OS=Mus muscul | yes | N/A | 0.608 | 0.402 | 0.274 | 2e-51 | |
| Q6PIF6 | 2116 | Unconventional myosin-VII | yes | N/A | 0.584 | 0.238 | 0.283 | 1e-50 | |
| Q622K8 | 2099 | Unconventional myosin hea | N/A | N/A | 0.584 | 0.240 | 0.277 | 3e-50 | |
| D3ZJP6 | 2060 | Unconventional myosin-X O | yes | N/A | 0.545 | 0.228 | 0.273 | 6e-50 | |
| F8VQB6 | 2062 | Unconventional myosin-X O | no | N/A | 0.545 | 0.228 | 0.269 | 7e-50 | |
| Q8NEV4 | 1616 | Myosin-IIIa OS=Homo sapie | no | N/A | 0.570 | 0.304 | 0.281 | 2e-49 | |
| P91443 | 2098 | Unconventional myosin hea | yes | N/A | 0.586 | 0.241 | 0.279 | 2e-49 | |
| P79114 | 2052 | Unconventional myosin-X O | no | N/A | 0.545 | 0.229 | 0.271 | 1e-48 |
| >sp|Q8WXR4|MYO3B_HUMAN Myosin-IIIb OS=Homo sapiens GN=MYO3B PE=2 SV=4 | Back alignment and function desciption |
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Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 177/620 (28%), Positives = 275/620 (44%), Gaps = 119/620 (19%)
Query: 137 RFQAWKACLGVLGIPFMD-----VVRVLAAVLLLGNVQFVDKSSSSGNNGTVTEVGVNGE 191
+F+A + C ++G F D V R+LA +L +GN++F SS + + V
Sbjct: 581 QFEAIQHCFRIIG--FTDKEVHSVYRILAGILNIGNIEFAAISSQHQTDKS----EVPNA 634
Query: 192 STLNSVASLLGVPSASLFRGITTRTHNARGQLVKSLCDANMSNMTRDCLAKALYCRTVAT 251
L + AS+L + L +T+ RG+ + + + RD ++KALY R +
Sbjct: 635 EALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADVRDAMSKALYGRLFSW 694
Query: 252 IVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQHASTVGTAGSKSSKSMAALNNAVRH 311
IV R N+L L D N + +AG +N
Sbjct: 695 IVNRINTL---------LQPDEN----------------ICSAG-------GGMN----- 717
Query: 312 ATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVE 371
+GILD+FGFE+ + + E LCIN+ E +Q+++N H+F ++E I + V
Sbjct: 718 -----VGILDIFGFENFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYQNEGIDA-VP 771
Query: 372 VDYVDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPVDA 430
V+Y DN P +D+ GLL++LD E + T +T + K + R + PK V+
Sbjct: 772 VEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVDKFEDNLR-CKYFWRPKGVEL 830
Query: 431 RCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSL- 489
CF IQH+AG+VLYD S LE N+D +P D+V V +T LF L +L
Sbjct: 831 -CFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVL--RTSENKLLQQLFSIPLTKTGNLA 887
Query: 490 ----------ETVPRGISFRISPTSHSDLLNGDEPVSTLTQD-----FHTRLDNLLRSLV 534
++P S + +++ E + + + F L +LL +V
Sbjct: 888 QTRARITVASSSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYFRYSLMDLLSKMV 947
Query: 535 HARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYR 594
+PHFVRC+K N + +F R V+ Q+RS +LETV++ GY HR+ F+ F RY
Sbjct: 948 VGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILFEEFVKRYY 1007
Query: 595 LLAPFCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQ 654
LA +T E C+ IL+ +H WV+GK +FL +
Sbjct: 1008 YLA--FTAHQTPLASKESCVAILEKSRLDH--------------WVLGKTKVFLKYYHVE 1051
Query: 655 QLEMLRSDT--------------------------RHRAAVLIQAVWRGTYARKRWPLL- 687
QL +L + R + A+ IQ+ WRG AR+++ +
Sbjct: 1052 QLNLLLREVIGRVVVLQAYTKGWLGARRYKRVREKREKGAIAIQSAWRGYDARRKFKKIS 1111
Query: 688 -RRNLEMKSGNTGGTSNLSS 706
RRN G TSN SS
Sbjct: 1112 NRRNESAAHNQAGDTSNQSS 1131
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Probable actin-based motor with a protein kinase activity. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9U1M8|MYOI_DICDI Myosin-I heavy chain OS=Dictyostelium discoideum GN=myoI PE=1 SV=1 | Back alignment and function description |
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| >sp|Q1EG27|MYO3B_MOUSE Myosin-IIIb OS=Mus musculus GN=Myo3b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6PIF6|MYO7B_HUMAN Unconventional myosin-VIIb OS=Homo sapiens GN=MYO7B PE=2 SV=2 | Back alignment and function description |
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| >sp|Q622K8|HUM6_CAEBR Unconventional myosin heavy chain 6 OS=Caenorhabditis briggsae GN=hum-6 PE=3 SV=1 | Back alignment and function description |
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| >sp|D3ZJP6|MYO10_RAT Unconventional myosin-X OS=Rattus norvegicus GN=Myo10 PE=1 SV=1 | Back alignment and function description |
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| >sp|F8VQB6|MYO10_MOUSE Unconventional myosin-X OS=Mus musculus GN=Myo10 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8NEV4|MYO3A_HUMAN Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=2 SV=2 | Back alignment and function description |
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| >sp|P91443|HUM6_CAEEL Unconventional myosin heavy chain 6 OS=Caenorhabditis elegans GN=hum-6 PE=1 SV=1 | Back alignment and function description |
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| >sp|P79114|MYO10_BOVIN Unconventional myosin-X OS=Bos taurus GN=MYO10 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 863 | ||||||
| 91092448 | 1026 | PREDICTED: similar to myosin x [Triboliu | 0.820 | 0.690 | 0.746 | 0.0 | |
| 307171387 | 1146 | Myosin-I heavy chain [Camponotus florida | 0.838 | 0.631 | 0.743 | 0.0 | |
| 270004772 | 1066 | hypothetical protein TcasGA2_TC010547 [T | 0.820 | 0.664 | 0.746 | 0.0 | |
| 328705162 | 1150 | PREDICTED: LOW QUALITY PROTEIN: myosin-V | 0.836 | 0.627 | 0.731 | 0.0 | |
| 307206220 | 1142 | Myosin-Va [Harpegnathos saltator] | 0.826 | 0.624 | 0.727 | 0.0 | |
| 383847080 | 1142 | PREDICTED: unconventional myosin-IXb-lik | 0.836 | 0.632 | 0.741 | 0.0 | |
| 328784613 | 1144 | PREDICTED: myosin-IXb isoform 1 [Apis me | 0.837 | 0.631 | 0.739 | 0.0 | |
| 340719459 | 1142 | PREDICTED: myosin-I heavy chain-like [Bo | 0.836 | 0.632 | 0.740 | 0.0 | |
| 380029710 | 1146 | PREDICTED: unconventional myosin-IXb-lik | 0.836 | 0.630 | 0.736 | 0.0 | |
| 156537215 | 921 | PREDICTED: myosin-IXb [Nasonia vitripenn | 0.840 | 0.787 | 0.723 | 0.0 |
| >gi|91092448|ref|XP_969433.1| PREDICTED: similar to myosin x [Tribolium castaneum] | Back alignment and taxonomy information |
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Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/742 (74%), Positives = 621/742 (83%), Gaps = 34/742 (4%)
Query: 108 KLHLESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDVVRVLAAVLLLGN 167
KL+LE +TP L YLQ GDTRQD ED++RFQ WK CLG+LGIPF+DVVRVLAAVLLLGN
Sbjct: 312 KLNLEGHTPATLRYLQHGDTRQDLAEDSSRFQTWKTCLGILGIPFLDVVRVLAAVLLLGN 371
Query: 168 VQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSL 227
VQF+D G EV V G++ LN+VA LLGV A+LFRG+TTRTHNARGQLVKS+
Sbjct: 372 VQFLD--------GKGLEVDVKGDTELNAVAGLLGVSGAALFRGLTTRTHNARGQLVKSV 423
Query: 228 CDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQH 287
CDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQA+V SQH
Sbjct: 424 CDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQAEVTSQH 483
Query: 288 ASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQH 347
ASTV + + SKSMAALNNAVRHATDG IGILDMFGFEDPKPSQLEHLCINLCAETMQH
Sbjct: 484 ASTVNGSTNAGSKSMAALNNAVRHATDGFIGILDMFGFEDPKPSQLEHLCINLCAETMQH 543
Query: 348 FYNTHMFKSSIESCRDENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSLRGTAET 407
FYNTH+FKSSIESCRDE I+ +VEVDYVDNVPCIDLISSLRTGLLSMLDVECS+RGTAE+
Sbjct: 544 FYNTHIFKSSIESCRDEGINCEVEVDYVDNVPCIDLISSLRTGLLSMLDVECSIRGTAES 603
Query: 408 YLGKVKAQHRHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHK 467
Y+ K+ QH+HN RLF+PKPVD R F IQHFAGRV+YD +DFL+TNKDVVPDDLV+VF+K
Sbjct: 604 YVSKISVQHKHNSRLFEPKPVDPRLFGIQHFAGRVVYDATDFLDTNKDVVPDDLVAVFYK 663
Query: 468 QTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLD 527
C FGFATHLFGSELKALYS+E+VPRG+SFRISPTSH+DLLNGDEPVSTLTQDFHTRLD
Sbjct: 664 HNCNFGFATHLFGSELKALYSVESVPRGVSFRISPTSHTDLLNGDEPVSTLTQDFHTRLD 723
Query: 528 NLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFK 587
NLLR+LVHARPHFVRC+++NS ET +FDRGTV+RQIRSLQVLETVNLMAGGYPHRMRFK
Sbjct: 724 NLLRTLVHARPHFVRCIRSNSQETPNRFDRGTVVRQIRSLQVLETVNLMAGGYPHRMRFK 783
Query: 588 AFNARYRLLAPFCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIF 647
AFNARYRLLAPF +L RT++++T+DC LILQ V + K + VSTSW +GKRHIF
Sbjct: 784 AFNARYRLLAPFARLHRTDEKVTDDCHLILQYVVDLISKQ---HNTLVSTSWALGKRHIF 840
Query: 648 LSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLRRNLEMKSGNTGGTSNLSSN 707
LSEGIRQ LE LR++TR +AA LIQA WRG + R RW LRR E KS +N ++
Sbjct: 841 LSEGIRQHLEKLRTETRQKAATLIQATWRGWHCRYRWAALRREKEHKSA-----TNTNTL 895
Query: 708 HRTSNGGGANACLPSTSKASAPPTLTRPRPQPIAGTPPPDPNEKCDQKIIQQTCTLFGLD 767
+ + GGA + RPRPQPIAGTPPPDPNEKCD KIIQQTC LFGLD
Sbjct: 896 NNRTPIGGA---------------IARPRPQPIAGTPPPDPNEKCDAKIIQQTCNLFGLD 940
Query: 768 LERPPPVPPSRPYTVTGNSKISYPQTRVMKMPYPED--GKGDVTLGKGEAVVVVGASSRR 825
LERPPPVPPSR YTV+GN+K+ YPQTRVMKM YPED G+G V L KGE V+VVGAS RR
Sbjct: 941 LERPPPVPPSRSYTVSGNTKLGYPQTRVMKMSYPEDCNGEGQV-LMKGETVLVVGASHRR 999
Query: 826 GHLVVEHCNTSIHVPFQFLELK 847
GHL+VEH + + HVPFQFLELK
Sbjct: 1000 GHLIVEHKHCTFHVPFQFLELK 1021
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Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307171387|gb|EFN63268.1| Myosin-I heavy chain [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|270004772|gb|EFA01220.1| hypothetical protein TcasGA2_TC010547 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|328705162|ref|XP_001944496.2| PREDICTED: LOW QUALITY PROTEIN: myosin-Va [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|307206220|gb|EFN84300.1| Myosin-Va [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|383847080|ref|XP_003699183.1| PREDICTED: unconventional myosin-IXb-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|328784613|ref|XP_624098.2| PREDICTED: myosin-IXb isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|340719459|ref|XP_003398171.1| PREDICTED: myosin-I heavy chain-like [Bombus terrestris] gi|350410455|ref|XP_003489045.1| PREDICTED: myosin-I heavy chain-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|380029710|ref|XP_003698510.1| PREDICTED: unconventional myosin-IXb-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|156537215|ref|XP_001604941.1| PREDICTED: myosin-IXb [Nasonia vitripennis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 863 | ||||||
| FB|FBgn0262029 | 1317 | d "dachs" [Drosophila melanoga | 0.650 | 0.425 | 0.702 | 1.7e-266 | |
| DICTYBASE|DDB_G0274455 | 2357 | myoI "myosin VII" [Dictyosteli | 0.169 | 0.061 | 0.409 | 1.1e-43 | |
| ZFIN|ZDB-GENE-070912-471 | 1124 | si:dkey-249g23.1 "si:dkey-249g | 0.426 | 0.327 | 0.323 | 4.3e-43 | |
| WB|WBGene00002036 | 1839 | hum-2 [Caenorhabditis elegans | 0.398 | 0.187 | 0.328 | 1.2e-41 | |
| MGI|MGI:2448580 | 1305 | Myo3b "myosin IIIB" [Mus muscu | 0.488 | 0.323 | 0.3 | 1.7e-41 | |
| UNIPROTKB|E1C7H7 | 1624 | MYO3A "Uncharacterized protein | 0.403 | 0.214 | 0.318 | 5.6e-41 | |
| UNIPROTKB|H9KZX6 | 902 | H9KZX6 "Uncharacterized protei | 0.422 | 0.404 | 0.318 | 1.2e-40 | |
| UNIPROTKB|F1PQ33 | 2117 | MYO7B "Uncharacterized protein | 0.405 | 0.165 | 0.333 | 1.7e-40 | |
| UNIPROTKB|J9JHP0 | 2143 | MYO7B "Uncharacterized protein | 0.405 | 0.163 | 0.333 | 1.8e-40 | |
| UNIPROTKB|F1MDE3 | 1125 | MYO3B "Uncharacterized protein | 0.425 | 0.326 | 0.315 | 2.1e-40 |
| FB|FBgn0262029 d "dachs" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2060 (730.2 bits), Expect = 1.7e-266, Sum P(4) = 1.7e-266
Identities = 409/582 (70%), Positives = 466/582 (80%)
Query: 108 KLHLESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGN 167
KLHL+ Y+P NL YL+ GD Q++ EDAARFQAWK CLG+LGIPF+D GN
Sbjct: 544 KLHLDGYSPANLRYLR-GDIGQNEQEDAARFQAWKTCLGILGIPFLDVVRVLAAVLLLGN 602
Query: 168 VQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSL 227
VQF+D G EV V GE+ LNSVASLLGVP A+LFRG+TTRTHN RGQLVKS+
Sbjct: 603 VQFID--------GGGLEVDVKGETELNSVASLLGVPPAALFRGLTTRTHNVRGQLVKSV 654
Query: 228 CDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQH 287
C +NMTRDCLAKALYCRTVATIVRRANSLKR DSNESVHNQADVASQH
Sbjct: 655 CGDGDANMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQH 714
Query: 288 ASTVGTAGSKSSKSMAALNNAVRHAT-DGSIGILDMFGFEDPKP-SQLEHLCINLCAETM 345
AST+G G+ SKSMAALNNAVRHAT DG IGILDMFGFE+P P + LEHLCINLCAETM
Sbjct: 715 ASTIG-GGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAHLEHLCINLCAETM 773
Query: 346 QHFYNTHMFKSSIESCRDENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSLRGTA 405
QHFYNTH+FKSS+ESCRDE I D EVDYVDNVPCIDLISSLRTGLLSMLD ECS+RGTA
Sbjct: 774 QHFYNTHIFKSSVESCRDEGIVCDTEVDYVDNVPCIDLISSLRTGLLSMLDAECSVRGTA 833
Query: 406 ETYLGKVKAQHRHNPRLFDPKPV----DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDL 461
E+Y+ K+K QHR + RL + KP D R F I+HFAGRV YDT+DFL+TN+DVVPDDL
Sbjct: 834 ESYVTKLKVQHRSSTRL-ETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLDTNRDVVPDDL 892
Query: 462 VSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQD 521
V VF+K TC FGFATHLFGSELKALY+ + PRG+SFRISPTSHSDLLNGDEPVSTLTQD
Sbjct: 893 VGVFYKHTCNFGFATHLFGSELKALYAQQQAPRGLSFRISPTSHSDLLNGDEPVSTLTQD 952
Query: 522 FHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYP 581
FHTRLDNLLR+LVHARPHFVRC+++N +E + FDR TV+RQIRSLQVLETVNLMA G+P
Sbjct: 953 FHTRLDNLLRTLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFP 1012
Query: 582 HRMRFKAFNARYRLLAPFCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVI 641
HRMRFK FNARYR+LAPF LRR+ED+ EDC LIL+ E+ P+L S V+ +W
Sbjct: 1013 HRMRFKQFNARYRMLAPFRLLRRSEDKALEDCQLILKYAMEQ---PPVLDGS-VTLAWAP 1068
Query: 642 GKRHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKR 683
GKRH+FLSEGIRQ LE LR++ RH++A L+QA WRG + RK+
Sbjct: 1069 GKRHVFLSEGIRQHLEHLRTEIRHKSATLMQATWRGWWWRKK 1110
|
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| DICTYBASE|DDB_G0274455 myoI "myosin VII" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-070912-471 si:dkey-249g23.1 "si:dkey-249g23.1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00002036 hum-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2448580 Myo3b "myosin IIIB" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C7H7 MYO3A "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|H9KZX6 H9KZX6 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PQ33 MYO7B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9JHP0 MYO7B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MDE3 MYO3B "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 863 | |||
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 1e-137 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 1e-101 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 5e-75 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 4e-73 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 2e-72 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 2e-64 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 3e-62 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 2e-61 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 2e-58 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 4e-58 | |
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 6e-58 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 1e-57 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 1e-52 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 2e-32 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 3e-31 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 9e-12 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 1e-08 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 6e-08 | |
| pfam00612 | 21 | pfam00612, IQ, IQ calmodulin-binding motif | 0.002 | |
| smart00015 | 23 | smart00015, IQ, Calmodulin-binding motif | 0.002 |
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
Score = 422 bits (1088), Expect = e-137
Identities = 172/558 (30%), Positives = 243/558 (43%), Gaps = 88/558 (15%)
Query: 108 KLHLESYTPLNLSYL-QSGDTRQDDVEDAARFQAWKACLGVLGIP---FMDVVRVLAAVL 163
KL L+ P + YL Q G D ++DA F+ K L LG + R+LAA+L
Sbjct: 205 KLGLKR--PESYRYLNQGGCNDVDGIDDAEEFEELKEALKSLGFSEEEIESIFRILAAIL 262
Query: 164 LLGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQL 223
LGN++F S V L+ A LLG+ L +T + G++
Sbjct: 263 HLGNIEF-----KSVGGEGQEAAEVKNTEVLSKAAELLGLDPEELEEALTYKVTKVGGEV 317
Query: 224 VKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADV 283
+ + +RD LAKALY R IV R NS +L
Sbjct: 318 ITIPLTKEEAVDSRDSLAKALYSRLFDWIVSRINS---------SLKPKDG--------- 359
Query: 284 ASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAE 343
IGILD+FGFE + + E LCIN E
Sbjct: 360 -----------------------------RSLFIGILDIFGFEIFEKNSFEQLCINYANE 390
Query: 344 TMQHFYNTHMFKSSIESCRDENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSL-R 402
+Q F+N H+FK E ++E I +D+ DN IDLI GLLS+LD EC +
Sbjct: 391 KLQQFFNQHVFKLEQEEYQEEGI-DWESIDFTDNQEVIDLIEKKPGGLLSLLDEECLFPK 449
Query: 403 GTAETYLGKVKAQHRHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLV 462
GT ET+L K+ + + N + K FTI+H+AG V YD FLE NKDV+ +LV
Sbjct: 450 GTDETFLEKLNNKLKSNNAFYPAKKNAPTEFTIKHYAGDVTYDARGFLEKNKDVLSPELV 509
Query: 463 SVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDF 522
S+ + F LF SEL S T + + T+ F
Sbjct: 510 SLLKSSSNPFIR--ELFESELSKTG------------NSSTGSTSSKGKKKKGQTVGSQF 555
Query: 523 HTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPH 582
T LD L+ +L PHF+RC+K N + FD G V++Q+R L +LET+ + G+
Sbjct: 556 RTSLDALMATLNSTEPHFIRCIKPNEEKKPNAFDSGKVLQQLRYLGILETIRIRRLGFSV 615
Query: 583 RMRFKAFNARYRLLAPFCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIG 642
R+ F F +RYR LAP + + + +CLL L + ++ W +G
Sbjct: 616 RIPFDEFLSRYRFLAPDLLEKVSLTKKQVECLLELLGLPKD--------------EWQVG 661
Query: 643 KRHIFLSEGIRQQLEMLR 660
K +FL EG +LE +R
Sbjct: 662 KTKVFLKEGQLSELEKMR 679
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 679 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif | Back alignment and domain information |
|---|
| >gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 863 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| KOG0162|consensus | 1106 | 100.0 | ||
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| KOG0164|consensus | 1001 | 100.0 | ||
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG0161|consensus | 1930 | 100.0 | ||
| KOG0163|consensus | 1259 | 100.0 | ||
| KOG0160|consensus | 862 | 100.0 | ||
| KOG4229|consensus | 1062 | 100.0 | ||
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 97.51 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 96.66 | |
| KOG4229|consensus | 1062 | 95.55 | ||
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 90.17 | |
| KOG4427|consensus | 1096 | 86.86 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-149 Score=1334.73 Aligned_cols=593 Identities=28% Similarity=0.469 Sum_probs=530.5
Q ss_pred cCCCCcccccCCCCCCCCCCCceeecCCCCcccccccchhhhhhccCcchhccccccccccccCCccceEEEE-------
Q psy6222 13 EKCPPVPAVGGGGSTPHSPGDAEVTPRAAPVAVSCSAQLDDLIHLPGPLTEDAVLKCLHARFNASQLFLNFKV------- 85 (863)
Q Consensus 13 ~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~p~LEA~fGna~T~rN~NSSRFgkf~~------- 85 (863)
+||++|+||||+|||++|+.+++|.++.+.++....+.||++|+++|||||| ||||+|+|||||||||||+.
T Consensus 152 NQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEA-FGNAkTvRNdNSSRFGKyikI~Fd~~g 230 (1463)
T COG5022 152 NQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEA-FGNAKTVRNDNSSRFGKYIKIEFDENG 230 (1463)
T ss_pred CceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHH-hccccccccCCcccccceEEEEECCCC
Confidence 7999999999999999999999999998888887888999999999999999 99999999999999999974
Q ss_pred ---------eeecCceeeeehh----hhhHHHHHH--------HcCCCCCCCCCccccCCC-CccCCCHHHHHHHHHHHH
Q psy6222 86 ---------ALWERHLIVSVVI----ILVFFSVTV--------KLHLESYTPLNLSYLQSG-DTRQDDVEDAARFQAWKA 143 (863)
Q Consensus 86 ---------~lleksrvv~~~~----fHIFYqL~~--------~l~L~~~~~~~y~YL~qg-~~~~~~~dDa~~F~~l~~ 143 (863)
|||||+|||+|.. |||||||.+ .++++ +|++|.||++| |..++++||+++|+.|+.
T Consensus 231 ~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~--~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~ 308 (1463)
T COG5022 231 EICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQ--NPKDYIYLSQGGCDKIDGIDDAKEFKITLD 308 (1463)
T ss_pred ceechhhhhhhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhcc--ChHhhHhHhhcCCCcCCCcccHHHHHHHHH
Confidence 9999999999988 999999943 34444 69999999998 889999999999999999
Q ss_pred HhccCCCCc---hhHHHHHHHHHhhccceEEeccCCCCCCCCcceEEecChhhHHHhHhcCCCCHHHHHhhHceeEEecC
Q psy6222 144 CLGVLGIPF---MDVVRVLAAVLLLGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNAR 220 (863)
Q Consensus 144 Al~vLG~s~---~dIfrVLAAILHLGNI~F~~~~~~~~~~~~~~~~~v~~~~~l~~aA~LLGv~~~~L~~aLt~r~~~~~ 220 (863)
||+++||+. .+||+|||||||||||+|... ....+.+.+.+.++.+|+|||||++.|.++|+.|.+.++
T Consensus 309 AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~--------r~g~a~~~~~~~~~~~c~LLgId~~~f~k~lvk~~ikt~ 380 (1463)
T COG5022 309 ALKTIGIDEEEQDQIFKILAAILHIGNIEFKED--------RNGAAIFSDNSVLDKACYLLGIDPSLFVKWLVKRQIKTG 380 (1463)
T ss_pred HHHHhCCChHHHHHHHHHHHHHHhhcceeeeec--------ccchhhcCCchHHHHHHHHhCCCHHHHHHHHHHhHhhcC
Confidence 999999984 679999999999999999984 233566788899999999999999999999999999999
Q ss_pred CeEEEecCChhhhhHhHHhHHHHHHHHHHHHHHHHhhcccccccccCCCCCCCccccccchhhhhccccccccCCCCCch
Q psy6222 221 GQLVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQHASTVGTAGSKSSK 300 (863)
Q Consensus 221 ~e~v~~~~~~~~A~~~RDaLaK~LY~rLF~wIV~~IN~~~r~~~~~~~l~~d~~es~~~~~~~~~q~~s~~~~~~~~~s~ 300 (863)
+|.|.++++.+||..+||+|||+||++||+|||++||.++-- .
T Consensus 381 ~E~i~~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~--~----------------------------------- 423 (1463)
T COG5022 381 GEWIVVPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDH--S----------------------------------- 423 (1463)
T ss_pred ceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--c-----------------------------------
Confidence 999999999999999999999999999999999999984311 0
Q ss_pred hhHhhhhhcccCccceeeeecCCCCCCCCCCchhHHHHhhhhhhHHHHHhHhhhhhhHhhhhccCCcccccccccCCchh
Q psy6222 301 SMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVDNVPC 380 (863)
Q Consensus 301 s~~~l~~~~~~~~~~~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~iF~~eqeeY~~EGI~~~~~i~~~DN~~~ 380 (863)
....+|||||||||||+|+.|||||||||||||||||+||+|||+.|||+|.+|||+|+ .|+|.||++|
T Consensus 424 ----------~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~-~Idy~DnQ~~ 492 (1463)
T COG5022 424 ----------AAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWS-FIDYFDNQPC 492 (1463)
T ss_pred ----------cccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCccc-ccccccCcch
Confidence 01246999999999999999999999999999999999999999999999999999995 9999999999
Q ss_pred hhhhhcc-cccccccchhhhcC-CCChhHHHHHHHhHhc-CCCCCCCCCCCCCCceEEEeeeeeeeecchhhhhhcCCCC
Q psy6222 381 IDLISSL-RTGLLSMLDVECSL-RGTAETYLGKVKAQHR-HNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVV 457 (863)
Q Consensus 381 ldLi~~~-~~Gll~lLDeE~~~-~gtd~tfl~kl~~~~~-~~~~~~~~k~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l 457 (863)
|||||++ |.|||++|||||.+ .|+|++|.+||...+. .+...+++.......|+|+||||+|+|+++||++||+|++
T Consensus 493 IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l 572 (1463)
T COG5022 493 IDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPL 572 (1463)
T ss_pred hHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecccceeeccchhhhCcchh
Confidence 9999984 78999999999998 7999999999998876 4444555544556799999999999999999999999999
Q ss_pred cHHHHHHHHhccccccchhhhhhhhHHhhhccccCCCCcccccCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHhccC
Q psy6222 458 PDDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHAR 537 (863)
Q Consensus 458 ~~dlv~ll~~S~~~~~fi~~LF~~~l~~~~~~~~~~~~~s~r~s~~s~~~~~~g~~~~~Tv~~qfk~~L~~Lm~~L~~t~ 537 (863)
++++++|+..|++ .|+..||...... . .++.+.|+++.|+.||..||.+|++|+
T Consensus 573 ~~~ll~Ll~~StN--e~vs~Lf~~~~~~------~------------------~K~~~pT~gs~~K~sl~~Lm~tl~sTq 626 (1463)
T COG5022 573 NDDLLELLKASTN--EFVSTLFDDEENI------E------------------SKGRFPTLGSRFKESLNSLMSTLNSTQ 626 (1463)
T ss_pred hHHHHHHHhhccc--hHHHHhhhhhhhc------c------------------ccCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999874 5699999743210 0 112346999999999999999999999
Q ss_pred CeeEeeccCCCCCCcCCCChHHHHHHhcccchhhHHHHHhcCCCcccchHHHHHHhhhccCccccc---cccchhHHHHH
Q psy6222 538 PHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLR---RTEDRLTEDCL 614 (863)
Q Consensus 538 phFIRCIKPN~~k~p~~FD~~~V~~QLr~~GvlEtvri~r~GyP~R~~f~eF~~RY~~L~p~~~~~---~~~~~~~e~~~ 614 (863)
||||||||||.+|+|..||...|+.||||+||+|+|||+|+|||.|++|+||+.||++|.|..... .+.+..+++|+
T Consensus 627 phyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~ 706 (1463)
T COG5022 627 PHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVK 706 (1463)
T ss_pred CceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999865421 23355788999
Q ss_pred HHHHHhHhhcccCcccccccCccceEeeceEEEechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHh
Q psy6222 615 LILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPL-LRRNLEM 693 (863)
Q Consensus 615 ~iL~~l~~~~~~~~~~~~~~~~~~~~iGkTkVFLr~~~~~~LE~~R~~~~~~~a~~IQa~~Rg~l~Rk~~~~-~r~~~~i 693 (863)
.||..+..+ ...|++|+||||||++++..||++|+..++.+++.||++|||++.||+|.+ +++...+
T Consensus 707 ~IL~~~~id------------~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~ 774 (1463)
T COG5022 707 SILEELVID------------SSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKI 774 (1463)
T ss_pred HHHHhhcCC------------hhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999876532 467999999999999999999999999999999999999999999999987 4566667
Q ss_pred hhccCCCCC
Q psy6222 694 KSGNTGGTS 702 (863)
Q Consensus 694 ~~~~~~~~~ 702 (863)
+..+.....
T Consensus 775 ~~~~~~~~~ 783 (1463)
T COG5022 775 QVIQHGFRL 783 (1463)
T ss_pred HHHhcccch
Confidence 766655443
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >KOG0162|consensus | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >KOG0164|consensus | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG0161|consensus | Back alignment and domain information |
|---|
| >KOG0163|consensus | Back alignment and domain information |
|---|
| >KOG0160|consensus | Back alignment and domain information |
|---|
| >KOG4229|consensus | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >KOG4229|consensus | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG4427|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 863 | ||||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 7e-46 | ||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 4e-45 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 2e-41 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-33 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 2e-33 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 6e-33 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 6e-32 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-31 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 3e-31 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 4e-31 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 7e-31 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 7e-31 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 7e-31 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-30 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-30 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-30 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 2e-30 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 2e-30 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 2e-30 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 3e-30 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 3e-30 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 3e-30 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 3e-30 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 3e-30 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 3e-30 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 3e-30 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 3e-30 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 3e-30 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 4e-30 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 4e-30 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 5e-30 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 5e-30 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-29 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 2e-29 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 2e-29 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 2e-29 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 2e-29 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 2e-29 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 2e-29 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 3e-29 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 5e-29 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 5e-29 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 8e-29 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 8e-29 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 8e-29 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 9e-29 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 9e-29 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 9e-29 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 9e-29 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-28 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-28 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-28 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-28 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-28 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-28 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-28 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 5e-27 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 3e-26 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 6e-26 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 6e-26 |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
|
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 363 bits (934), Expect = e-110
Identities = 152/594 (25%), Positives = 237/594 (39%), Gaps = 89/594 (14%)
Query: 108 KLHLES---YTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGIP---FMDVVRVLAA 161
L L + + Q G D ++DA + +LGI M + R+LA
Sbjct: 276 TLRLGNANYFHYTK----QGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAG 331
Query: 162 VLLLGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARG 221
+L LGNV+F + S S L L+GV + + R
Sbjct: 332 ILHLGNVEFASRDSDSC-------AIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATAT 384
Query: 222 QLVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQA 281
+ + RD LAK +Y IV N +++H+
Sbjct: 385 ETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN-----------------KALHSTV 427
Query: 282 DVASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLC 341
S IG+LD++GFE + + E CIN
Sbjct: 428 KQHS------------------------------FIGVLDIYGFETFEINSFEQFCINYA 457
Query: 342 AETMQHFYNTHMFKSSIESCRDENIHSDVE-VDYVDNVPCIDLISSLRTGLLSMLDVECS 400
E +Q +N H+FK E E I +D+ DN PCI+LI + + G+L +LD EC
Sbjct: 458 NEKLQQQFNMHVFKLEQEEYMKEQI--PWTLIDFYDNQPCINLIEA-KMGVLDLLDEECK 514
Query: 401 L-RGTAETYLGKVKAQHRHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPD 459
+ +G+ +T+ K+ H + LF+ + + F I+HFA +V Y FLE NKD V +
Sbjct: 515 MPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYE 574
Query: 460 DLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVS--- 516
+ + V F LF E KA+ P G +
Sbjct: 575 EQIKVLKSSKK-FKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHK 633
Query: 517 -TLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNL 575
T+ F L L+ +L PH+VRC+K N + FD ++Q+R+ VLET+ +
Sbjct: 634 KTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRI 693
Query: 576 MAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEV 635
A G+P R ++ F +RYR+L K ++ + + C +L+ + + K
Sbjct: 694 SAAGFPSRWTYQEFFSRYRVLMKQ-KDVLSDRK--QTCKNVLEKLILDKDK--------- 741
Query: 636 STSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLRR 689
+ GK IF G LE +R+D A + IQ RG RK++ +RR
Sbjct: 742 ---YQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR 792
|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 863 | |||
| 1w7j_A | 795 | Myosin VA; motor protein, unconventional myosin, m | 100.0 | |
| 1kk8_A | 837 | Myosin heavy chain, striated muscle; actin-detache | 100.0 | |
| 4anj_A | 1052 | Unconventional myosin-VI, green fluorescent prote; | 100.0 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 100.0 | |
| 4db1_A | 783 | Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb | 100.0 | |
| 1lkx_A | 697 | Myosin IE heavy chain; myosin motor domain, lever | 100.0 | |
| 2v26_A | 784 | Myosin VI; calmodulin-binding, nucleotide-binding, | 100.0 | |
| 1w9i_A | 770 | Myosin II heavy chain; molecular motor, ATPase, mo | 100.0 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 100.0 | |
| 1g8x_A | 1010 | Myosin II heavy chain fused to alpha-actinin 3; mo | 100.0 | |
| 2ycu_A | 995 | Non muscle myosin 2C, alpha-actinin; motor protein | 100.0 | |
| 2ix7_C | 58 | Myosin-5A; contractIle protein/metal binding, acti | 96.73 | |
| 2ix7_C | 58 | Myosin-5A; contractIle protein/metal binding, acti | 96.71 | |
| 1wdc_A | 64 | Scallop myosin; calcium binding protein, muscle pr | 96.68 | |
| 1n2d_C | 48 | IQ2 and IQ3 motifs from MYO2P, A class V myosin; p | 96.58 | |
| 1n2d_C | 48 | IQ2 and IQ3 motifs from MYO2P, A class V myosin; p | 95.76 | |
| 2bl0_A | 63 | Major plasmodial myosin heavy chain; muscle protei | 95.72 | |
| 2l53_B | 31 | CAM, voltage-gated sodium channel type V alpha iso | 95.03 | |
| 2kxw_B | 27 | Sodium channel protein type 2 subunit alpha; actio | 94.94 | |
| 2jxb_A | 86 | T-cell surface glycoprotein CD3 epsilon chain, cyt | 91.35 | |
| 3gn4_A | 148 | Myosin-VI; unconventional myosin, motility, lever | 89.64 | |
| 1kk8_A | 837 | Myosin heavy chain, striated muscle; actin-detache | 86.11 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 84.7 | |
| 2bl0_A | 63 | Major plasmodial myosin heavy chain; muscle protei | 82.45 | |
| 2ed0_A | 78 | ABL interactor 2; coiled coil, cytoskeleton, nucle | 82.35 | |
| 1wdc_A | 64 | Scallop myosin; calcium binding protein, muscle pr | 81.88 | |
| 1zuu_A | 58 | BZZ1 protein; SH3 domain, unknown function; 0.97A | 80.06 |
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-146 Score=1320.90 Aligned_cols=601 Identities=27% Similarity=0.429 Sum_probs=517.2
Q ss_pred ccCCCCcccccCCCCCCCCCCCceeecCCCCcccccccchhhhhhccCcchhccccccccccccCCccceEEEE------
Q psy6222 12 NEKCPPVPAVGGGGSTPHSPGDAEVTPRAAPVAVSCSAQLDDLIHLPGPLTEDAVLKCLHARFNASQLFLNFKV------ 85 (863)
Q Consensus 12 ~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~p~LEA~fGna~T~rN~NSSRFgkf~~------ 85 (863)
.+||++|+||||+|||++++-++.|....+.+.. .+.|+++|+++|||||| ||||||+|||||||||||+.
T Consensus 155 ~nQsIiisGESGAGKTe~tK~i~~yla~~~~~~~--~~~ie~~il~snpiLEA-FGNAkT~rNdNSSRFGKfi~i~F~~~ 231 (795)
T 1w7j_A 155 RNQSIIVSGESGAGKTVSAKYAMRYFATVSGSAS--EANVEEKVLASNPIMES-IGNAKTTRNDNSSRFGKYIEIGFDKR 231 (795)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHHTCCSS--SSCHHHHHHHHHHHHHH-HHEECCSSCTTEECSEEEEEEEECTT
T ss_pred CCeEEEEeCCCCCCcchHHHHHHHHHHhhcCCCC--ccchHHHHHHHHHHHHH-hcCccCCCCCCccccceEEEEEECCC
Confidence 5799999999999999999999999987654432 36899999999999999 99999999999999999974
Q ss_pred ----------eeecCceeeeehh----hhhHHHHHH--------HcCCCCCCCCCccccCCCC-ccCCCHHHHHHHHHHH
Q psy6222 86 ----------ALWERHLIVSVVI----ILVFFSVTV--------KLHLESYTPLNLSYLQSGD-TRQDDVEDAARFQAWK 142 (863)
Q Consensus 86 ----------~lleksrvv~~~~----fHIFYqL~~--------~l~L~~~~~~~y~YL~qg~-~~~~~~dDa~~F~~l~ 142 (863)
|||||+|||.|.. |||||||.+ +|+|. ++++|+||++|. ..++++||+++|++++
T Consensus 232 g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLlag~~~~~~~~l~L~--~~~~y~yl~~~~~~~~~~~dD~~~f~~~~ 309 (795)
T 1w7j_A 232 YRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLG--NANYFHYTKQGGSPVIDGIDDAKEMVNTR 309 (795)
T ss_dssp SCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCC--CTTTSHHHHTTSCCCCTTCCHHHHHHHHH
T ss_pred CCEeeeeceEEecccceEeccCCCCCchHhHHHHHcCCCHHHHHHccCC--ChHhCccccCCCCCcCCCccHHHHHHHHH
Confidence 8999999999987 999999944 46775 699999999985 5789999999999999
Q ss_pred HHhccCCCCc---hhHHHHHHHHHhhccceEEeccCCCCCCCCcceEEe-cChhhHHHhHhcCCCCHHHHHhhHceeEEe
Q psy6222 143 ACLGVLGIPF---MDVVRVLAAVLLLGNVQFVDKSSSSGNNGTVTEVGV-NGESTLNSVASLLGVPSASLFRGITTRTHN 218 (863)
Q Consensus 143 ~Al~vLG~s~---~dIfrVLAAILHLGNI~F~~~~~~~~~~~~~~~~~v-~~~~~l~~aA~LLGv~~~~L~~aLt~r~~~ 218 (863)
+||++|||+. .+||+|||||||||||+|.+.+ + +.+.+ .+++.++.||.||||++++|.++|++|++.
T Consensus 310 ~Am~~lG~s~~e~~~i~~ilaaILhLGNi~F~~~~-------~-~~~~v~~~~~~l~~~a~LLgv~~~~L~~aL~~~~~~ 381 (795)
T 1w7j_A 310 QACTLLGISDSYQMGIFRILAGILHLGNVEFASRD-------S-DSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLA 381 (795)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEE-------T-TEEECCTTCHHHHHHHHHHTCCHHHHHHHHSEEEEE
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhccCceEeecC-------C-cceeecCChHHHHHHHHHhCCCHHHHHHHhcccEEE
Confidence 9999999994 5799999999999999998752 1 23445 678899999999999999999999999999
Q ss_pred cCCeEEEecCChhhhhHhHHhHHHHHHHHHHHHHHHHhhcccccccccCCCCCCCccccccchhhhhccccccccCCCCC
Q psy6222 219 ARGQLVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQHASTVGTAGSKS 298 (863)
Q Consensus 219 ~~~e~v~~~~~~~~A~~~RDaLaK~LY~rLF~wIV~~IN~~~r~~~~~~~l~~d~~es~~~~~~~~~q~~s~~~~~~~~~ 298 (863)
++++.++++++++||.++||||||+||+|||+|||++||.++.. .
T Consensus 382 ~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~--~--------------------------------- 426 (795)
T 1w7j_A 382 TATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHS--T--------------------------------- 426 (795)
T ss_dssp CSSCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--S---------------------------------
T ss_pred eCCceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--C---------------------------------
Confidence 99999999999999999999999999999999999999985421 0
Q ss_pred chhhHhhhhhcccCccceeeeecCCCCCCCCCCchhHHHHhhhhhhHHHHHhHhhhhhhHhhhhccCCcccccccccCCc
Q psy6222 299 SKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVDNV 378 (863)
Q Consensus 299 s~s~~~l~~~~~~~~~~~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~iF~~eqeeY~~EGI~~~~~i~~~DN~ 378 (863)
.....+||||||||||+|+.|||||||||||||||||+||+|+|+.||+||++|||+| ..|+|.||+
T Consensus 427 ------------~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w-~~i~f~DN~ 493 (795)
T 1w7j_A 427 ------------VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW-TLIDFYDNQ 493 (795)
T ss_dssp ------------SCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCCCCCH
T ss_pred ------------ccccceEEeeccCcccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcc-cccCccccH
Confidence 0123599999999999999999999999999999999999999999999999999999 599999999
Q ss_pred hhhhhhhcccccccccchhhhcC-CCChhHHHHHHHhHh-cCCCCCCCCCCCCCCceEEEeeeeeeeecchhhhhhcCCC
Q psy6222 379 PCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDV 456 (863)
Q Consensus 379 ~~ldLi~~~~~Gll~lLDeE~~~-~gtd~tfl~kl~~~~-~~~~~~~~~k~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~ 456 (863)
+|||||+++ .|||+||||||++ ++||++|++||..+| ++|+.|.+|+. ...+|+|+||||+|.|+++|||+||+|.
T Consensus 494 ~~idLie~~-~GIlslLDEec~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~-~~~~F~I~HyAG~V~Y~~~gfleKNkD~ 571 (795)
T 1w7j_A 494 PCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRL-SNKAFIIKHFADKVEYQCEGFLEKNKDT 571 (795)
T ss_dssp HHHHHHHST-TSHHHHHHHHHTSTTCCHHHHHHHHHHHHTTTCTTEECCTT-CSSEEEEECSSCEEEEECTTHHHHHHCC
T ss_pred HHHHHHHhc-CCHHHhhhhhccCCCCChHHHHHHHHHHhhccCCccccCCC-CCCceEEEecceEEEEechhHHhhcccc
Confidence 999999996 9999999999998 799999999999998 88888887765 4689999999999999999999999999
Q ss_pred CcHHHHHHHHhccccccchhhhhhhhHHhhhccccCC--CCcccccCCCC--CCCccCCCCCCcchHHHHHHHHHHHHHH
Q psy6222 457 VPDDLVSVFHKQTCIFGFATHLFGSELKALYSLETVP--RGISFRISPTS--HSDLLNGDEPVSTLTQDFHTRLDNLLRS 532 (863)
Q Consensus 457 l~~dlv~ll~~S~~~~~fi~~LF~~~l~~~~~~~~~~--~~~s~r~s~~s--~~~~~~g~~~~~Tv~~qfk~~L~~Lm~~ 532 (863)
|+++++++|+.|+ .+.|++.||.............. .+...+.+.++ ......+.....||+++|+.||+.||++
T Consensus 572 l~~~~~~ll~~S~-~~~~v~~lf~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL~~Lm~~ 650 (795)
T 1w7j_A 572 VYEEQIKVLKSSK-KFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650 (795)
T ss_dssp CCHHHHHHHHTCS-SCSHHHHTTC---------------------------------------CCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhcc-ccHHHHHHhccccccccccccccccccccccccccccccccccccCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999998876 14579999986432111000000 00000110000 0000112334679999999999999999
Q ss_pred HhccCCeeEeeccCCCCCCcCCCChHHHHHHhcccchhhHHHHHhcCCCcccchHHHHHHhhhccCccccccccchhHHH
Q psy6222 533 LVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTED 612 (863)
Q Consensus 533 L~~t~phFIRCIKPN~~k~p~~FD~~~V~~QLr~~GvlEtvri~r~GyP~R~~f~eF~~RY~~L~p~~~~~~~~~~~~e~ 612 (863)
|++|+||||||||||+.+.|+.||..+|++||||+||||+|||+|+|||+|++|.+|+.||++|+|...... +.++.
T Consensus 651 L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~~~~~~~---d~k~~ 727 (795)
T 1w7j_A 651 LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLS---DRKQT 727 (795)
T ss_dssp HHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSCGGGCCS---CHHHH
T ss_pred HhcCCCeEEEEeCCCCcCChhhcCcccccchhhhCChHHHHHHHHcCCCccccHHHHHHHHHHhCCcccCCC---CHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998654322 56789
Q ss_pred HHHHHHHhHhhcccCcccccccCccceEeeceEEEechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy6222 613 CLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLRRNL 691 (863)
Q Consensus 613 ~~~iL~~l~~~~~~~~~~~~~~~~~~~~iGkTkVFLr~~~~~~LE~~R~~~~~~~a~~IQa~~Rg~l~Rk~~~~~r~~~ 691 (863)
|+.||+.+.. ..++|++|+||||||+++++.||++|++++.++++.||++||||++||+|.+||+..
T Consensus 728 ~~~il~~~~~------------~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 728 CKNVLEKLIL------------DKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHCC------------CGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCC------------CccceEEcCceEEEchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999988752 236899999999999999999999999999999999999999999999999999754
|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... | Back alignment and structure |
|---|
| >4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa} | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} | Back alignment and structure |
|---|
| >1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A | Back alignment and structure |
|---|
| >1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
| >2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus} | Back alignment and structure |
|---|
| >2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa} | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
| >2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A | Back alignment and structure |
|---|
| >1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 863 | ||||
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 1e-104 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 4e-99 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 3e-97 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 2e-95 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 6e-89 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 6e-85 |
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]
Score = 337 bits (865), Expect = e-104
Identities = 153/591 (25%), Positives = 232/591 (39%), Gaps = 83/591 (14%)
Query: 108 KLHLESYTPLNLSYL-QSGDTRQDDVEDAARFQAWKACLGVLGIP---FMDVVRVLAAVL 163
L L Y Q G D ++DA + +LGI M + R+LA +L
Sbjct: 214 TLRLG--NANYFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGIL 271
Query: 164 LLGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQL 223
LGNV+F + S S L L+GV + + R +
Sbjct: 272 HLGNVEFASRDSDSC-------AIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLATATET 324
Query: 224 VKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADV 283
+ RD LAK +Y IV N L S +
Sbjct: 325 YIKPISKLHAINARDALAKHIYANLFNWIVDHVNK---------ALHSTVKQHSFI---- 371
Query: 284 ASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAE 343
G+LD++GFE + + E CIN E
Sbjct: 372 ----------------------------------GVLDIYGFETFEINSFEQFCINYANE 397
Query: 344 TMQHFYNTHMFKSSIESCRDENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSL-R 402
+Q +N H+FK E E I +D+ DN PCI+LI + + G+L +LD EC + +
Sbjct: 398 KLQQQFNMHVFKLEQEEYMKEQIPWT-LIDFYDNQPCINLIEA-KMGVLDLLDEECKMPK 455
Query: 403 GTAETYLGKVKAQHRHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLV 462
G+ +T+ K+ H + LF+ + + F I+HFA +V Y FLE NKD V ++ +
Sbjct: 456 GSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQI 515
Query: 463 SVFHKQTCIFGFATHLFGSELKALYSLETVPRG----ISFRISPTSHSDLLNGDEPVSTL 518
V K + F LF E KA+ P G + P E T+
Sbjct: 516 KVL-KSSKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTV 574
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
F L L+ +L PH+VRC+K N + FD ++Q+R+ VLET+ + A
Sbjct: 575 GHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAA 634
Query: 579 GYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTS 638
G+P R ++ F +RYR+L + + C +L+ + +
Sbjct: 635 GFPSRWTYQEFFSRYRVLMKQKDVLSDRK---QTCKNVLEKLILDK------------DK 679
Query: 639 WVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLRR 689
+ GK IF G LE +R+D A + IQ RG RK++ +RR
Sbjct: 680 YQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR 730
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 863 | |||
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d1gria1 | 56 | Growth factor receptor-bound protein 2 (GRB2), N- | 89.72 | |
| d1k9aa1 | 71 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 89.69 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 88.92 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 82.96 | |
| d1ugva_ | 72 | Olygophrenin-1 like protein (KIAA0621) {Human (Hom | 82.89 | |
| d1opka1 | 57 | Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul | 80.44 |
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]
Probab=100.00 E-value=3.1e-135 Score=1224.03 Aligned_cols=601 Identities=27% Similarity=0.441 Sum_probs=511.2
Q ss_pred ccCCCCcccccCCCCCCCCCCCceeecCCCCcccccccchhhhhhccCcchhccccccccccccCCccceEEEE------
Q psy6222 12 NEKCPPVPAVGGGGSTPHSPGDAEVTPRAAPVAVSCSAQLDDLIHLPGPLTEDAVLKCLHARFNASQLFLNFKV------ 85 (863)
Q Consensus 12 ~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~p~LEA~fGna~T~rN~NSSRFgkf~~------ 85 (863)
.+||++|+||||+|||++++-++.|....+.+. ..+.++++|+++|||||| ||||+|++|+||||||||+.
T Consensus 93 ~~Q~IiisGeSGsGKTe~~k~il~~l~~~s~~~--~~~~~~~~i~~~n~ilea-FGnAkT~~N~NSSRfgk~~~l~f~~~ 169 (730)
T d1w7ja2 93 RNQSIIVSGESGAGKTVSAKYAMRYFATVSGSA--SEANVEEKVLASNPIMES-IGNAKTTRNDNSSRFGKYIEIGFDKR 169 (730)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHHTCCS--SSSCHHHHHHHHHHHHHH-HHEECCSSCTTEECSEEEEEEEECTT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHHcCCC--ccccHHHHHHHHHHHHHH-hcccccCCCCCcccceeeeeeeecCC
Confidence 589999999999999999999999886654332 245899999999999999 99999999999999999974
Q ss_pred ----------eeecCceeeeehh----hhhHHHHHHH--------cCCCCCCCCCccccCCCC-ccCCCHHHHHHHHHHH
Q psy6222 86 ----------ALWERHLIVSVVI----ILVFFSVTVK--------LHLESYTPLNLSYLQSGD-TRQDDVEDAARFQAWK 142 (863)
Q Consensus 86 ----------~lleksrvv~~~~----fHIFYqL~~~--------l~L~~~~~~~y~YL~qg~-~~~~~~dDa~~F~~l~ 142 (863)
|||||+||+.+.. |||||||.+. |+|. ++++|+||+++. ...++++|+++|++++
T Consensus 170 g~i~ga~i~~ylLEksRv~~~~~~ErnfHIFY~ll~g~~~~~~~~l~l~--~~~~~~yl~~~~~~~~~~~~d~~~f~~~~ 247 (730)
T d1w7ja2 170 YRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLG--NANYFHYTKQGGSPVIDGIDDAKEMVNTR 247 (730)
T ss_dssp SCEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCC--CTTTSHHHHTTSCCCCTTCCHHHHHHHHH
T ss_pred CCEEEEEEEEccccccceeeecCCCCcchhHHHHHcCCCHHHHHHhCCC--ChhhhhhhccCCCceeCCcchHHHHHHHH
Confidence 7888888887776 9999999553 4454 689999999875 4678999999999999
Q ss_pred HHhccCCCCc---hhHHHHHHHHHhhccceEEeccCCCCCCCCcceEEecChhhHHHhHhcCCCCHHHHHhhHceeEEec
Q psy6222 143 ACLGVLGIPF---MDVVRVLAAVLLLGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNA 219 (863)
Q Consensus 143 ~Al~vLG~s~---~dIfrVLAAILHLGNI~F~~~~~~~~~~~~~~~~~v~~~~~l~~aA~LLGv~~~~L~~aLt~r~~~~ 219 (863)
.||+.|||+. .+||+|||||||||||+|.+.+ +++.+.+.+.+.++.||.||||+.++|.++|+++++.+
T Consensus 248 ~al~~lG~~~ee~~~i~~iLaaILhLGni~f~~~~-------~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~ 320 (730)
T d1w7ja2 248 QACTLLGISDSYQMGIFRILAGILHLGNVEFASRD-------SDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLAT 320 (730)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEE-------TTEEECCTTCHHHHHHHHHHTCCHHHHHHHHSEEEEEC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHheeceeEEEecC-------CcceeecCCHHHHHHHHHhhCCCHHHHHHhhheeeEee
Confidence 9999999984 5699999999999999999862 23345567888999999999999999999999999999
Q ss_pred CCeEEEecCChhhhhHhHHhHHHHHHHHHHHHHHHHhhcccccccccCCCCCCCccccccchhhhhccccccccCCCCCc
Q psy6222 220 RGQLVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQHASTVGTAGSKSS 299 (863)
Q Consensus 220 ~~e~v~~~~~~~~A~~~RDaLaK~LY~rLF~wIV~~IN~~~r~~~~~~~l~~d~~es~~~~~~~~~q~~s~~~~~~~~~s 299 (863)
+++.+.+++++++|..+||+|||+||++||+|||.+||..+.. +
T Consensus 321 ~~e~i~~~~~~~~a~~~rdalak~lY~~LF~wiv~~iN~~l~~--~---------------------------------- 364 (730)
T d1w7ja2 321 ATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHS--T---------------------------------- 364 (730)
T ss_dssp SSCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--S----------------------------------
T ss_pred ccceeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--c----------------------------------
Confidence 9999999999999999999999999999999999999985421 0
Q ss_pred hhhHhhhhhcccCccceeeeecCCCCCCCCCCchhHHHHhhhhhhHHHHHhHhhhhhhHhhhhccCCcccccccccCCch
Q psy6222 300 KSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVDNVP 379 (863)
Q Consensus 300 ~s~~~l~~~~~~~~~~~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~iF~~eqeeY~~EGI~~~~~i~~~DN~~ 379 (863)
.....+||||||||||+|+.|||||||||||||+||++|++++|..||++|++|||+| ..|+|.||++
T Consensus 365 -----------~~~~~~IgiLDifGFE~f~~NsfEQLcINy~NEkLq~~f~~~~F~~e~~~y~~EgI~~-~~i~~~dN~~ 432 (730)
T d1w7ja2 365 -----------VKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPW-TLIDFYDNQP 432 (730)
T ss_dssp -----------SCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCCCCCHH
T ss_pred -----------cccccccceeeccCCcccCcccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCCCC-cccCcCCChh
Confidence 0123589999999999999999999999999999999999999999999999999999 5999999999
Q ss_pred hhhhhhcccccccccchhhhcC-CCChhHHHHHHHhHhcCCCCCCCCCCCCCCceEEEeeeeeeeecchhhhhhcCCCCc
Q psy6222 380 CIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458 (863)
Q Consensus 380 ~ldLi~~~~~Gll~lLDeE~~~-~gtd~tfl~kl~~~~~~~~~~~~~k~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~ 458 (863)
|||||++ +.|||++|||||.+ +++|++|++||..+|.+++.++.++......|+|+||||+|+|+++||++||+|.++
T Consensus 433 ~l~Li~~-~~gil~lLdee~~~~~~td~~~l~kl~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKNrD~l~ 511 (730)
T d1w7ja2 433 CINLIEA-KMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVY 511 (730)
T ss_dssp HHHHHHS-TTSHHHHHHHHHTSTTCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEECSSCEEEEECTTHHHHHHCCCC
T ss_pred HHhhhhc-cccHHHHhHHhccCCCCchHHHHHHHHHHhcCCCcccCCCCCCCCceEEEEcCCccccccchhHHhhhcccc
Confidence 9999997 58999999999998 789999999999888776666655545667999999999999999999999999999
Q ss_pred HHHHHHHHhccccccchhhhhhhhHHhhhccccCCCCc--ccc--cCCCCCCCccCCCCCCcchHHHHHHHHHHHHHHHh
Q psy6222 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGI--SFR--ISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLV 534 (863)
Q Consensus 459 ~dlv~ll~~S~~~~~fi~~LF~~~l~~~~~~~~~~~~~--s~r--~s~~s~~~~~~g~~~~~Tv~~qfk~~L~~Lm~~L~ 534 (863)
++++++|+.|++ ..++..||.+...........+++. ..+ ..+..............||+++|+.||+.||++|+
T Consensus 512 ~~~~~ll~~Ssn-~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fr~sL~~L~~~L~ 590 (730)
T d1w7ja2 512 EEQIKVLKSSKK-FKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLN 590 (730)
T ss_dssp HHHHHHHHTCSS-CSHHHHTTC---------------------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-hHHHHHHhhccccccccccccccccccccccccccccccccccccccCCcHHHHHHHHHHHHHHHHh
Confidence 999999988763 4689999987644332222111110 000 00000000111233457999999999999999999
Q ss_pred ccCCeeEeeccCCCCCCcCCCChHHHHHHhcccchhhHHHHHhcCCCcccchHHHHHHhhhccCccccccccchhHHHHH
Q psy6222 535 HARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTEDCL 614 (863)
Q Consensus 535 ~t~phFIRCIKPN~~k~p~~FD~~~V~~QLr~~GvlEtvri~r~GyP~R~~f~eF~~RY~~L~p~~~~~~~~~~~~e~~~ 614 (863)
+|+||||||||||+.+.|+.||...|++||||+||+|+|+|+++|||+|++|.+|++||++|++... ...+.++.|+
T Consensus 591 ~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlE~vrir~~Gyp~R~~f~eF~~RY~~L~~~~~---~~~~~k~~~~ 667 (730)
T d1w7ja2 591 ATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKD---VLSDRKQTCK 667 (730)
T ss_dssp TSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSCGGG---CCSCHHHHHH
T ss_pred CCCCeEEEEECCCCccCCCCcCHHHHHHHHHHhcHHHHHHHHhcCCCccccHHHHHHHHHHHCCCCC---CCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987543 2234578999
Q ss_pred HHHHHhHhhcccCcccccccCccceEeeceEEEechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q psy6222 615 LILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLRR 689 (863)
Q Consensus 615 ~iL~~l~~~~~~~~~~~~~~~~~~~~iGkTkVFLr~~~~~~LE~~R~~~~~~~a~~IQa~~Rg~l~Rk~~~~~r~ 689 (863)
.||+.+..+ ..+|++|+||||||++++..||++|++.+.++++.||++||||++||+|.+||+
T Consensus 668 ~lL~~l~~~------------~~~~~iGkTkVFlr~~~~~~LE~~r~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r~ 730 (730)
T d1w7ja2 668 NVLEKLILD------------KDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRR 730 (730)
T ss_dssp HHHHHHCCC------------GGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCC------------cccEEecCCEEEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999887532 368999999999999999999999999999999999999999999999999884
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|