Psyllid ID: psy6250
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 778 | 2.2.26 [Sep-21-2011] | |||||||
| P25286 | 838 | V-type proton ATPase 116 | yes | N/A | 0.888 | 0.824 | 0.451 | 0.0 | |
| Q9Z1G4 | 839 | V-type proton ATPase 116 | yes | N/A | 0.877 | 0.814 | 0.445 | 0.0 | |
| Q29466 | 838 | V-type proton ATPase 116 | yes | N/A | 0.889 | 0.825 | 0.453 | 0.0 | |
| Q93050 | 837 | V-type proton ATPase 116 | yes | N/A | 0.889 | 0.826 | 0.453 | 0.0 | |
| Q8AVM5 | 831 | V-type proton ATPase 116 | N/A | N/A | 0.880 | 0.824 | 0.449 | 0.0 | |
| Q5R422 | 837 | V-type proton ATPase 116 | yes | N/A | 0.893 | 0.830 | 0.454 | 0.0 | |
| Q920R6 | 833 | V-type proton ATPase 116 | no | N/A | 0.877 | 0.819 | 0.428 | 1e-175 | |
| Q9HBG4 | 840 | V-type proton ATPase 116 | no | N/A | 0.890 | 0.825 | 0.419 | 1e-173 | |
| P30628 | 905 | Probable V-type proton AT | yes | N/A | 0.889 | 0.764 | 0.401 | 1e-169 | |
| P15920 | 856 | V-type proton ATPase 116 | no | N/A | 0.890 | 0.809 | 0.395 | 1e-156 |
| >sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/793 (45%), Positives = 491/793 (61%), Gaps = 102/793 (12%)
Query: 2 HLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHEIWNIFFG----------- 50
+ E+ E+E+ E++ N LK N+LELTELK +L KTQ FF E+ +
Sbjct: 100 NFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEMADPDLLEESSSLLEPNE 159
Query: 51 -GRYIILLMGLFSIYTGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDLILDPATSDYD 109
GR L +G + G+I + + + N L E + + DP T DY
Sbjct: 160 MGRGAPLRLGFVA---GVINRERIPTFERMLWRVCRGNVFLRQ-AEIENPLEDPVTGDY- 214
Query: 110 QIPYPFVKFDYSLLFQGNEIYKTVFVAFFQGEQLKSRVKKVCSGFHASFYPCPSAHQERT 169
++K+VF+ FFQG+QLK+RVKK+C GF AS YPCP QER
Sbjct: 215 -------------------VHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERK 255
Query: 170 DMVQGVKTRLEDLNMVLNQTRDHRQRVLVSVAKELHAWSVMVRKMKAIYHTLNSFNMDVT 229
+M GV TR++DL MVLNQT DHRQRVL + AK + W + VRKMKAIYHTLN N+DVT
Sbjct: 256 EMASGVNTRIDDLQMVLNQTEDHRQRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVT 315
Query: 230 KKCLIGECWVPVKHLTFVRLTLAEGSKAVGSSIPSFLNVIETNEMPPTFNQTNRFTQGFQ 289
+KCLI E W PV L ++ L G++ GS++PS LN ++TN+ PPT+N+TN+FT GFQ
Sbjct: 316 QKCLIAEVWCPVTDLDSIQFALRRGTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTHGFQ 375
Query: 290 NLIDSYGIATYRELNPGLYTIVTFPFLFGIMFGDAGHGIILTLFGAFMVIWEQKLMKKKT 349
N++D+YGI TYRE+NP YT++TFPFLF +MFGD GHGI++TLF +MV+ E +++ +K
Sbjct: 376 NIVDAYGIGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKN 435
Query: 350 TNEIWNIFFGGRYIILLMGLFSIYTGLIYNDFFSKSISVFGSAWK-------NNYNLSTI 402
NE++++ F GRYIILLMGLFSIYTGLIYND FSKS+++FGS+W N+ T+
Sbjct: 436 ENEMFSMVFSGRYIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTIGNWTEETL 495
Query: 403 MENRDLILDPATSDYDQIPYPFGLDPVWQVAENKIIFLNSYKMKLSIIFGVVHMIFGVTL 462
+ + L L+PA PYPFG+DP+W +A NK+ FLNS+KMK+S+I G++HM+FGV+L
Sbjct: 496 LGSSVLQLNPAIPGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSL 555
Query: 463 SVINHVHFRKPVNILLEFLPQLIFLVLLFGYMVTLMFMKWIMYAPQNPLLTSPRCAPSVL 522
S+ NH++F+KP+NI F+P++IF+ LFGY+V L+F KW Y S R APS+L
Sbjct: 556 SLFNHIYFKKPLNIYFGFIPEIIFMSSLFGYLVILIFYKWTAYDAH-----SSRNAPSLL 610
Query: 523 ILFINMMLFKHSIPFPGCEEYMYESQHQVQTVLVLISLACIPVMLLGKPIYLIFFASKNK 582
I FINM LF S P G +Y Q +Q L+++++ C+P MLL KP+ L +
Sbjct: 611 IHFINMFLF--SYPESG-NAMLYSGQKGIQCFLIVVAMLCVPWMLLFKPLIL-------R 660
Query: 583 HKHQQVSNNGDLQ-GGIELHSNDEHQVQTVLVLISLACIPVMLLGKPIYLIFFASKNKHK 641
H++ + + G L GGI + + + ++ +
Sbjct: 661 HQYLRKKHLGTLNFGGIRVGNGPTEEDAEII----------------------------Q 692
Query: 642 HQQVSNNGDLQGGIELHSNDEVLPSSPEGPEEEHEEPAEILIHQSIHTIEYVLSTISHTA 701
H Q+S HS D P+ E+E + + ++HQ+IHTIEY L IS+TA
Sbjct: 693 HDQLST----------HSEDAEEPT-----EDEVFDFGDTMVHQAIHTIEYCLGCISNTA 737
Query: 702 SYLRLWALSLAHAQLSEVLWNMVLKLGLQSESHAGAIMLYISFALWAMFTLAILVMMEGL 761
SYLRLWALSLAHAQLSEVLW MV+ +GL S AG + L+ FA +A T+AIL++MEGL
Sbjct: 738 SYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGL 797
Query: 762 SAFLHTLRLHWKE 774
SAFLH LRLHW E
Sbjct: 798 SAFLHALRLHWVE 810
|
Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle. Rattus norvegicus (taxid: 10116) |
| >sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q920R6|VPP4_MOUSE V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus GN=Atp6v0a4 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3 | Back alignment and function description |
|---|
| >sp|P15920|VPP2_MOUSE V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus GN=Atp6v0a2 PE=1 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 778 | ||||||
| 19577376 | 849 | putative V-ATPase [Anopheles gambiae] | 0.907 | 0.831 | 0.597 | 0.0 | |
| 157138700 | 831 | vacuolar proton atpases [Aedes aegypti] | 0.888 | 0.831 | 0.589 | 0.0 | |
| 328721215 | 824 | PREDICTED: v-type proton ATPase 116 kDa | 0.885 | 0.836 | 0.565 | 0.0 | |
| 347966205 | 831 | AGAP001587-PA [Anopheles gambiae str. PE | 0.885 | 0.829 | 0.574 | 0.0 | |
| 195037577 | 837 | GH19224 [Drosophila grimshawi] gi|193894 | 0.893 | 0.830 | 0.563 | 0.0 | |
| 194743256 | 835 | GF18112 [Drosophila ananassae] gi|190627 | 0.892 | 0.831 | 0.563 | 0.0 | |
| 195497653 | 834 | GE25199 [Drosophila yakuba] gi|194182293 | 0.892 | 0.832 | 0.559 | 0.0 | |
| 195395240 | 836 | GJ10832 [Drosophila virilis] gi|19414295 | 0.889 | 0.827 | 0.558 | 0.0 | |
| 195343286 | 834 | GM18705 [Drosophila sechellia] gi|194133 | 0.892 | 0.832 | 0.557 | 0.0 | |
| 21357019 | 834 | vacuolar H[+] ATPase subunit 100-2, isof | 0.892 | 0.832 | 0.557 | 0.0 |
| >gi|19577376|emb|CAD27758.1| putative V-ATPase [Anopheles gambiae] | Back alignment and taxonomy information |
|---|
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/786 (59%), Positives = 560/786 (71%), Gaps = 80/786 (10%)
Query: 2 HLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHE----------IWNIFFGG 51
LE+TE+EILELSQNA+NLKSNYLELTELKHVLE+TQ+FF E N+
Sbjct: 102 RLEKTENEILELSQNAVNLKSNYLELTELKHVLERTQSFFFEQEVIVSTDAAKSNLIAED 161
Query: 52 RYIILLMGLFSIYTGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDLILDPATSDYDQI 111
G G+I + + + N L + E + + DPAT
Sbjct: 162 PTAAQSRGRLGFVAGVIQREKMPGFERMLWRISRGNIFLRQV-ELEEPLEDPAT------ 214
Query: 112 PYPFVKFDYSLLFQGNEIYKTVFVAFFQGEQLKSRVKKVCSGFHASFYPCPSAHQERTDM 171
GNEI+KTVFVAFFQGEQLK+R+KKVC+G+H S YPCPS+ ERTDM
Sbjct: 215 --------------GNEIFKTVFVAFFQGEQLKARIKKVCTGYHVSLYPCPSSGSERTDM 260
Query: 172 VQGVKTRLEDLNMVLNQTRDHRQRVLVSVAKELHAWSVMVRKMKAIYHTLNSFNMDVTKK 231
V+GV TRLEDL MVLNQT+DHR VL SVAKEL +W +MV+KMKAIYHTLN FNMDVTKK
Sbjct: 261 VKGVCTRLEDLRMVLNQTQDHRAIVLASVAKELFSWRIMVKKMKAIYHTLNLFNMDVTKK 320
Query: 232 CLIGECWVPVKHLTFVRLTLAEGSKAVGSSIPSFLNVIETNEMPPTFNQTNRFTQGFQNL 291
CLIGECWVPV L V+ L++GS AVGS+IPSFLNVI+TNE PPT+N+TN+FT+GFQNL
Sbjct: 321 CLIGECWVPVPDLPKVQKALSDGSAAVGSTIPSFLNVIDTNEAPPTYNRTNKFTRGFQNL 380
Query: 292 IDSYGIATYRELNPGLYTIVTFPFLFGIMFGDAGHGIILTLFGAFMVIWEQKLMKKKTTN 351
ID+YGIA+YRE NP LYTI+TFPFLFGIMFGD GHG+I+ LFG +MV E+KL KK+TN
Sbjct: 381 IDAYGIASYREANPALYTIITFPFLFGIMFGDLGHGMIMALFGLWMVTGEKKLGAKKSTN 440
Query: 352 EIWNIFFGGRYIILLMGLFSIYTGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDLILD 411
EIWNIFFGGRYIILLMGLFS+YTG +YND FSKS+++FGSAW NYN ST+M N+DL L+
Sbjct: 441 EIWNIFFGGRYIILLMGLFSMYTGFVYNDIFSKSMNIFGSAWSVNYNTSTVMTNKDLTLN 500
Query: 412 PATSDYDQIPYPFGLDPVWQVAENKIIFLNSYKMKLSIIFGVVHMIFGVTLSVINHVHFR 471
P ++DYD YP GLDPVWQ+A NKIIFLNSYKMKLSIIFGVVHMIFGV +SV+NH F+
Sbjct: 501 PGSTDYDTEIYPIGLDPVWQLASNKIIFLNSYKMKLSIIFGVVHMIFGVCMSVVNHNFFK 560
Query: 472 KPVNILLEFLPQLIFLVLLFGYMVTLMFMKWIMYAPQNPLL-TSPRCAPSVLILFINMML 530
K ++I+LEFLPQ+IFLVLLF YMV +MFMKWI Y + +P CAPSVLI+FINMML
Sbjct: 561 KRISIVLEFLPQIIFLVLLFAYMVFMMFMKWIAYTAKTDYQPRTPGCAPSVLIMFINMML 620
Query: 531 FKHSIPFPGCEEYMYESQHQVQTVLVLISLACIPVMLLGKPIYLIFFASKNKHKHQQVSN 590
FK+S PF GC+E+M+E Q+++Q V I+L CIP MLLGKP YL+F K K+ +
Sbjct: 621 FKNSEPFHGCDEFMFEGQNELQRTFVFIALLCIPWMLLGKPFYLMF---KRKNASPSLKE 677
Query: 591 NGDLQGGIELHSNDEHQVQTVLVLISLACIPVMLLGKPIYLIFFASKNKHKHQQVSNNGD 650
+ L L+ I L PI NNGD
Sbjct: 678 DNSL----------------------LSLIGHFFLQTPI----------------PNNGD 699
Query: 651 L-QGGIELHSNDEVLPSSPEGPEEEHEEP-AEILIHQSIHTIEYVLSTISHTASYLRLWA 708
+ QGG H++ SSP+ + +EP AEI IHQ+IHTIEYVLST+SHTASYLRLWA
Sbjct: 700 VHQGGDSNHTS-----SSPKPHDSHDDEPMAEIFIHQAIHTIEYVLSTVSHTASYLRLWA 754
Query: 709 LSLAHAQLSEVLWNMVLKLGLQSESHAGAIMLYISFALWAMFTLAILVMMEGLSAFLHTL 768
LSLAHA+LSEVLWNMVL +GL+ S+ GAIMLY F W++FTLAILVMMEGLSAFLHTL
Sbjct: 755 LSLAHAELSEVLWNMVLSMGLKQTSYKGAIMLYFVFGAWSLFTLAILVMMEGLSAFLHTL 814
Query: 769 RLHWKE 774
RLHW E
Sbjct: 815 RLHWVE 820
|
Source: Anopheles gambiae Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157138700|ref|XP_001657344.1| vacuolar proton atpases [Aedes aegypti] gi|108869446|gb|EAT33671.1| AAEL014053-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|328721215|ref|XP_001949631.2| PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|347966205|ref|XP_321521.2| AGAP001587-PA [Anopheles gambiae str. PEST] gi|333470164|gb|EAA43151.2| AGAP001587-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|195037577|ref|XP_001990237.1| GH19224 [Drosophila grimshawi] gi|193894433|gb|EDV93299.1| GH19224 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
| >gi|194743256|ref|XP_001954116.1| GF18112 [Drosophila ananassae] gi|190627153|gb|EDV42677.1| GF18112 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|195497653|ref|XP_002096192.1| GE25199 [Drosophila yakuba] gi|194182293|gb|EDW95904.1| GE25199 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
| >gi|195395240|ref|XP_002056244.1| GJ10832 [Drosophila virilis] gi|194142953|gb|EDW59356.1| GJ10832 [Drosophila virilis] | Back alignment and taxonomy information |
|---|
| >gi|195343286|ref|XP_002038229.1| GM18705 [Drosophila sechellia] gi|194133079|gb|EDW54647.1| GM18705 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
| >gi|21357019|ref|NP_650722.1| vacuolar H[+] ATPase subunit 100-2, isoform B [Drosophila melanogaster] gi|24647955|ref|NP_732337.1| vacuolar H[+] ATPase subunit 100-2, isoform A [Drosophila melanogaster] gi|4972752|gb|AAD34771.1| unknown [Drosophila melanogaster] gi|10726602|gb|AAF55551.2| vacuolar H[+] ATPase subunit 100-2, isoform B [Drosophila melanogaster] gi|10726603|gb|AAF55552.2| vacuolar H[+] ATPase subunit 100-2, isoform A [Drosophila melanogaster] gi|220943710|gb|ACL84398.1| Vha100-2-PA [synthetic construct] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 778 | ||||||
| FB|FBgn0028670 | 834 | Vha100-2 "Vacuolar H[+] ATPase | 0.731 | 0.682 | 0.579 | 3.7e-229 | |
| FB|FBgn0028671 | 855 | Vha100-1 "Vacuolar H[+] ATPase | 0.757 | 0.688 | 0.513 | 1e-202 | |
| FB|FBgn0038613 | 844 | Vha100-4 "Vacuolar H[+] ATPase | 0.582 | 0.536 | 0.576 | 8e-202 | |
| FB|FBgn0032373 | 814 | Vha100-5 "Vacuolar H[+] ATPase | 0.620 | 0.593 | 0.568 | 5.1e-196 | |
| MGI|MGI:103286 | 839 | Atp6v0a1 "ATPase, H+ transport | 0.578 | 0.536 | 0.531 | 1.4e-183 | |
| UNIPROTKB|F1PVU4 | 839 | ATP6V0A1 "Uncharacterized prot | 0.578 | 0.536 | 0.531 | 3e-183 | |
| ZFIN|ZDB-GENE-050522-215 | 839 | atp6v0a1b "ATPase, H+ transpor | 0.566 | 0.525 | 0.531 | 3.4e-182 | |
| UNIPROTKB|F1MH43 | 832 | LOC785923 "Uncharacterized pro | 0.724 | 0.677 | 0.469 | 1.9e-179 | |
| UNIPROTKB|F1MJV0 | 838 | LOC785923 "Uncharacterized pro | 0.724 | 0.673 | 0.469 | 5e-179 | |
| UNIPROTKB|Q29466 | 838 | ATP6V0A1 "V-type proton ATPase | 0.724 | 0.673 | 0.469 | 5e-179 |
| FB|FBgn0028670 Vha100-2 "Vacuolar H[+] ATPase 100kD subunit 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1769 (627.8 bits), Expect = 3.7e-229, Sum P(2) = 3.7e-229
Identities = 354/611 (57%), Positives = 447/611 (73%)
Query: 2 HLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFF--HEIWNIFFGGRY------ 53
HLE+TESE++EL+QN +N+KSNYLELTEL+ VLE TQ FF E+ N+ R
Sbjct: 101 HLEKTESEMIELAQNEVNMKSNYLELTELRKVLENTQGFFSDQEVLNLDSSNRAGGDNDA 160
Query: 54 IILLMGLFSIYTGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDL---ILDPATSDYDQ 110
G G+I + + + W+ + + ++ DL + DPAT
Sbjct: 161 AAQHRGRLGFVAGVINRE---RVFAFERMLWRISRG-NVFLKRSDLDEPLNDPAT----- 211
Query: 111 IPYPFVKFDYSLLFQGNEIYKTVFVAFFQGEQLKSRVKKVCSGFHASFYPCPSAHQERTD 170
G+ IYKTVFVAFFQGEQLK+R+KKVC+GFHAS YPCPS+H ER +
Sbjct: 212 ---------------GHPIYKTVFVAFFQGEQLKNRIKKVCTGFHASLYPCPSSHNEREE 256
Query: 171 MVQGVKTRLEDLNMVLNQTRDHRQRVLVSVAKELHAWSVMVRKMKAIYHTLNSFNMDVTK 230
MV+ V+TRLEDL +VL+QT DHR RVL +V+K L +WS+MV+KMKAIYHTLN FNMDVTK
Sbjct: 257 MVRNVRTRLEDLKLVLSQTEDHRSRVLATVSKNLPSWSIMVKKMKAIYHTLNLFNMDVTK 316
Query: 231 KCLIGECWVPVKHLTFVRLTLAEGSKAVGSSIPSFLNVIETNEMPPTFNQTNRFTQGFQN 290
KCLIGECWVP L V+ L++GS AVGS+IPSFLNVI+TNE PPTFN+TN+FT+GFQN
Sbjct: 317 KCLIGECWVPTNDLPVVQKALSDGSAAVGSTIPSFLNVIDTNEQPPTFNRTNKFTRGFQN 376
Query: 291 LIDSYGIATYRELNPGLYTIVTFPFLFGIMFGDAGHGIILTLFGAFMVIWEQKLMKKKTT 350
LID+YG+A+YRE NP LYT +TFPFLF +MFGD GHG+IL LFGA+MV+ E+KL + +
Sbjct: 377 LIDAYGVASYRECNPALYTCITFPFLFAVMFGDLGHGLILVLFGAWMVLCERKLARIRNG 436
Query: 351 NEIWNIFFGGRYIILLMGLFSIYTGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDLIL 410
EIWNIFFGGRYIILLMGLF++YTGL+YND FSKS+++FGS W NNYN +T++ N +L L
Sbjct: 437 GEIWNIFFGGRYIILLMGLFAMYTGLVYNDVFSKSMNLFGSRWFNNYNTTTVLTNPNLQL 496
Query: 411 DPATSDYDQIPYPFGLDPVWQVAENKIIFLNSYKMKLSIIFGVVHMIFGVTLSVINHVHF 470
P +S YPFG+DPVWQ+A+NKIIFLNS+KMKLSIIFGV+HM+FGV +SV+N HF
Sbjct: 497 PPNSSAVGV--YPFGMDPVWQLADNKIIFLNSFKMKLSIIFGVLHMVFGVCMSVVNFTHF 554
Query: 471 RKPVNILLEFLPQLIFLVLLFGYMVTLMFMKWIMYAPQNPLLT-SPRCAPSVLILFINMM 529
++ +I LEF+PQ++FL+LLFGYMV +MF KW Y + +P CAPSVLI+FINMM
Sbjct: 555 KRYASIFLEFVPQILFLLLLFGYMVFMMFFKWFSYNARTSFQPETPGCAPSVLIMFINMM 614
Query: 530 LFKHSIPFPGCEEYMYESQHQVQTVLVLISLACIPVMLLGKPIYLIFFASKNK-H-KHQ- 586
LFK++ P GC E+M+ESQ Q+Q VLI+L CIP MLLGKP+Y I F KNK H H
Sbjct: 615 LFKNTEPPKGCNEFMFESQPQLQKAFVLIALCCIPWMLLGKPLY-IKFTRKNKAHANHNG 673
Query: 587 QVSNNGDLQGG 597
Q++ N +L G
Sbjct: 674 QLTGNIELAEG 684
|
|
| FB|FBgn0028671 Vha100-1 "Vacuolar H[+] ATPase 100kD subunit 1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0038613 Vha100-4 "Vacuolar H[+] ATPase 100kD subunit 4" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0032373 Vha100-5 "Vacuolar H[+] ATPase 100kD subunit 5" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:103286 Atp6v0a1 "ATPase, H+ transporting, lysosomal V0 subunit A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PVU4 ATP6V0A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050522-215 atp6v0a1b "ATPase, H+ transporting, lysosomal V0 subunit a isoform 1b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MH43 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MJV0 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q29466 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q93050 | VPP1_HUMAN | No assigned EC number | 0.4538 | 0.8894 | 0.8267 | yes | N/A |
| Q9SJT7 | VHAA2_ARATH | No assigned EC number | 0.3767 | 0.7146 | 0.6772 | yes | N/A |
| Q54E04 | VATM_DICDI | No assigned EC number | 0.3622 | 0.8521 | 0.8134 | yes | N/A |
| Q29466 | VPP1_BOVIN | No assigned EC number | 0.4532 | 0.8894 | 0.8257 | yes | N/A |
| P25286 | VPP1_RAT | No assigned EC number | 0.4514 | 0.8881 | 0.8245 | yes | N/A |
| A1A5G6 | VPP1_XENTR | No assigned EC number | 0.4483 | 0.7339 | 0.6821 | yes | N/A |
| O13742 | VPH1_SCHPO | No assigned EC number | 0.3584 | 0.7287 | 0.6823 | yes | N/A |
| P30628 | VPP1_CAEEL | No assigned EC number | 0.4016 | 0.8894 | 0.7646 | yes | N/A |
| P32563 | VPH1_YEAST | No assigned EC number | 0.3833 | 0.7339 | 0.6797 | yes | N/A |
| Q9Z1G4 | VPP1_MOUSE | No assigned EC number | 0.4451 | 0.8778 | 0.8140 | yes | N/A |
| Q5R422 | VPP1_PONAB | No assigned EC number | 0.4543 | 0.8933 | 0.8303 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 778 | |||
| pfam01496 | 707 | pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni | 1e-156 | |
| COG1269 | 660 | COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su | 1e-50 | |
| pfam01496 | 707 | pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni | 3e-37 | |
| PRK05771 | 646 | PRK05771, PRK05771, V-type ATP synthase subunit I; | 5e-23 | |
| COG1269 | 660 | COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su | 3e-18 | |
| PRK05771 | 646 | PRK05771, PRK05771, V-type ATP synthase subunit I; | 3e-07 |
| >gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family | Back alignment and domain information |
|---|
Score = 471 bits (1213), Expect = e-156
Identities = 222/587 (37%), Positives = 317/587 (54%), Gaps = 79/587 (13%)
Query: 3 LERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFF------HEIW-NIFFGGRYII 55
+ E+EI E+ +N +L+ EL E +VL++ ++F N+ +Y+
Sbjct: 76 ILDLEAEIKEVEENLESLEKEINELEEWLNVLDEEKSFLDENLEELSELSNLDIDFKYLR 135
Query: 56 LLMGLFSIY-TGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDLILDPATSDYDQIPYP 114
GL + G+I + W+ E + + DP
Sbjct: 136 GAEGLKLGFVAGVINREKLEAFEREL---WRACRGYIRQAEIEEPLEDPK---------- 182
Query: 115 FVKFDYSLLFQGNEIYKTVFVAFFQGEQLKSRVKKVCSGFHASFYPCPSAHQERTDMVQG 174
KTVF+ FF G++ +VKK+ F Y P ER++++
Sbjct: 183 ----------------KTVFIIFFVGKEDLDKVKKILDSFGFELYDVPETEGERSELISK 226
Query: 175 VKTRLEDLNMVLNQTRDHRQRVLVSVAKELHAWSVMVRKMKAIYHTLNSFNMDVTKKCLI 234
V R+E+L VL QT H ++VLV +A EL AW V K KA+Y TLN FN K LI
Sbjct: 227 VNKRIEELQRVLEQTESHLEKVLVKIADELLAWDEQVSKEKAVYETLNLFN--YDTKTLI 284
Query: 235 GECWVPVKHLTFVRLTLAEGSKAVGSSIPSFLNVIETNEMPPTFNQTNRFTQGFQNLIDS 294
E WVP K L ++ L ++ GS +PS N IETNE PPT+ + N+FT FQ ++D+
Sbjct: 285 AEGWVPAKDLEKLKAALENATEGSGS-VPSIENDIETNEEPPTYLKNNKFTAPFQMIVDA 343
Query: 295 YGIATYRELNPGLYTIVTFPFLFGIMFGDAGHGIILTLFGAFMVIWEQKLMKKKTTNEIW 354
YGI YRE++P +TI+TFPF FG+MFGDAG+G+++ L +V+ E+KL KKK
Sbjct: 344 YGIPKYREIDPTPFTIITFPFFFGMMFGDAGYGLLMFLIALLLVLLEKKLGKKK------ 397
Query: 355 NIFFGGRYIILLMGLFSIYTGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDLILDPAT 414
F GRYI+LLMG+FSIYTG IYND F KS+++FGS W + + L L P
Sbjct: 398 ---FKGRYILLLMGVFSIYTGFIYNDCFGKSLNIFGSGWLWPVMIKSGET---LTLAPHE 451
Query: 415 SDYDQIPYPFGLDPVWQVAENKIIFLNSYKMKLSIIFGVVHMIFGVTLSVINHVHFRKPV 474
PYPFG+DP W ENK++FLNSYKMKLSII GV+HM FG+ L NHV F+ +
Sbjct: 452 G-----PYPFGIDPEWNGVENKLLFLNSYKMKLSIILGVIHMTFGLFLGFFNHVKFKSKI 506
Query: 475 NILLEFLPQLIFLVLLFGYMVTLMFMKWIMYAPQNPLLTSPRCAPSVLILFINMMLFKHS 534
+I F+PQL +L+++FGY+V L+ KW++ + + + APS+LI INM LF
Sbjct: 507 DIKDAFIPQLSWLIIIFGYLVILIIYKWLVDWAK-----TSKPAPSLLIGLINMFLFPG- 560
Query: 535 IPFPGCEEYMYESQHQVQTVLVLISLACIPVMLLGKPIYLIFFASKN 581
VQ LV+++L C+P++LL KP++L+ K
Sbjct: 561 ----------------VQVFLVVLALVCVPILLLLKPLFLMREGKKG 591
|
This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits, as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles, clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1. Length = 707 |
| >gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family | Back alignment and domain information |
|---|
| >gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 778 | |||
| KOG2189|consensus | 829 | 100.0 | ||
| PF01496 | 759 | V_ATPase_I: V-type ATPase 116kDa subunit family ; | 100.0 | |
| PRK05771 | 646 | V-type ATP synthase subunit I; Validated | 100.0 | |
| COG1269 | 660 | NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E | 100.0 | |
| KOG2189|consensus | 829 | 98.96 |
| >KOG2189|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-205 Score=1713.51 Aligned_cols=688 Identities=51% Similarity=0.878 Sum_probs=606.6
Q ss_pred CchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhchhhhhhhcccc-------cc-hHHHh-h-----ccccceEee
Q psy6250 1 NHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHEIWNIFF-------GG-RYIIL-L-----MGLFSIYTG 66 (778)
Q Consensus 1 ~~~~~~e~el~e~~~n~~~L~~~~~~L~E~k~VL~k~~~~~~e~~~~~~-------~~-r~li~-~-----m~~fs~~tG 66 (778)
++++++|+|++|+|+|.++|++|+++|+|+|+||+|+++||+....... .+ ..+.. . ..++.|+||
T Consensus 99 ~~l~klE~el~eln~n~~~L~~n~~eL~E~~~vl~~t~~Ff~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~FvaG 178 (829)
T KOG2189|consen 99 EQLEKLESELRELNANKEALKANYNELLELKYVLEKTDEFFSTSVQESFEDDETADLGEGPLESAEKGPFDGLKLGFVAG 178 (829)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhcchhhhhhcccccchhccCCCCcccceeEEe
Confidence 3689999999999999999999999999999999999999986221111 11 11111 1 236679999
Q ss_pred eeecCcccccccccc-cccc---ccccccccccccccccCCCCCCCCCCCcccccccccccccCcccccEEEEEEEeChh
Q psy6250 67 LIYNDFFSKSISVFG-SAWK---NNYNLSTIMENRDLILDPATSDYDQIPYPFVKFDYSLLFQGNEIYKTVFVAFFQGEQ 142 (778)
Q Consensus 67 ~I~~~~~s~s~~~F~-~~wr---gn~~~~~~~~~~~~~lDP~~~~~~~~Pypf~~~d~~~~~tg~~~~k~vfii~~~g~~ 142 (778)
+|.+++ ...|+ ++|| ||++.++. +++++..||. ||+.++|+||||||+|++
T Consensus 179 vI~r~k----~~~fER~LWRa~Rgn~f~r~~-~ie~~l~dp~--------------------Tge~~~K~vFivF~~Geq 233 (829)
T KOG2189|consen 179 VINREK----VFAFERMLWRACRGNLFIRQS-DIEEPLEDPK--------------------TGEPVEKNVFIVFFQGEQ 233 (829)
T ss_pred eechhH----HHHHHHHHHHHhccceEEEee-cccccccCCc--------------------cCCcceeEEEEEEeecHH
Confidence 999999 99999 9999 99999999 9999999998 999999999999999999
Q ss_pred hHHHHHHhhccccceecCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6250 143 LKSRVKKVCSGFHASFYPCPSAHQERTDMVQGVKTRLEDLNMVLNQTRDHRQRVLVSVAKELHAWSVMVRKMKAIYHTLN 222 (778)
Q Consensus 143 ~~~kv~kI~~~f~~~~~~~p~~~~~~~~~l~~l~~~i~~l~~~l~~~~~~~~~~l~~~~~~l~~w~~~v~k~k~iy~~LN 222 (778)
+++||+|||++|+|+.||||++++++++++.+++.|++|++.++++|++++.++|.++++++..|..+|+|+|+|||+||
T Consensus 234 l~~kIkKIcd~f~a~~yp~p~~~~er~~~~~~v~~ri~DL~~Vl~~t~~~r~~vL~~~~~~l~~W~~~v~K~KaIyhtLN 313 (829)
T KOG2189|consen 234 LKQKIKKICDGFGATLYPCPESPEERKEMLLEVNTRISDLQTVLDQTEDHRSRVLQAAAKNLPSWLIKVRKEKAIYHTLN 313 (829)
T ss_pred HHHHHHHHHhccCcEeecCCCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcEEEEEEeeecCCHHHHHHHHHccccccCCccceeeeccCCCCCCCccccCCccchhHHHHHHhhcCCCCCc
Q psy6250 223 SFNMDVTKKCLIGECWVPVKHLTFVRLTLAEGSKAVGSSIPSFLNVIETNEMPPTFNQTNRFTQGFQNLIDSYGIATYRE 302 (778)
Q Consensus 223 ~~~~~~t~~~~i~eGWvP~~~~~~i~~~L~~~~~~~~~~v~~~~~~~~~~~~PPT~lknnkft~pFq~Ivd~YGiP~Y~E 302 (778)
+|++|+|+||+++|||||+.|++.+|++|++++..+|++|+++++.+++++.||||+||||||++||+|||+||+++|+|
T Consensus 314 ~fn~Dvt~KCLIaE~W~P~~dl~~vq~aL~~~~~~sgS~v~~i~nv~~T~e~PPTy~RTNKFT~~FQ~IvDaYGVa~YrE 393 (829)
T KOG2189|consen 314 MFNFDVTQKCLIAEGWCPVADLPDLQRALERGSEESGSQVPSILNVMETNEMPPTYFRTNKFTAGFQNIVDAYGVASYRE 393 (829)
T ss_pred ccCccccCceEEEEeecchhhHHHHHHHHHHhhhhcCCcchhhHhheecCCCCCcchhcchhhHHHHHHHHhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhhhcccchhhHHhhhhhHHHHHHHhHHHHHHHHHhcccc
Q psy6250 303 LNPGLYTIVTFPFLFGIMFGDAGHGIILTLFGAFMVIWEQKLMKKKTTNEIWNIFFGGRYIILLMGLFSIYTGLIYNDFF 382 (778)
Q Consensus 303 iDPt~~~~itFPffFG~MfGDvGhGlllll~~l~l~~k~kkl~~~k~~~e~~~~lf~gRyiillmGi~Si~~G~lYgd~F 382 (778)
+||+|+|+|||||+||+||||+|||++|+++|+|++++|||+.++|..+|+|+|+|+|||||++||+||||+||||||||
T Consensus 394 vNPa~yTiITFPFLFAVMFGD~GHG~imlL~al~~Vl~Ekkl~~~k~~~EI~~mfF~GRYIIlLMGlFSiYTGliYND~F 473 (829)
T KOG2189|consen 394 VNPAPYTIITFPFLFAVMFGDLGHGLIMLLAALWMVLNEKKLASQKIGDEIFNMFFGGRYIILLMGLFSIYTGLIYNDFF 473 (829)
T ss_pred cCCCceeEeehHHHHHHHhcccchHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHhhhhhhhc
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred cCccccccccccccCcccccccCcceeecCCCCC-CCCCCccCCCCchhhhhhhhhhhcccchhHHHHHHHHHHHHHHHH
Q psy6250 383 SKSISVFGSAWKNNYNLSTIMENRDLILDPATSD-YDQIPYPFGLDPVWQVAENKIIFLNSYKMKLSIIFGVVHMIFGVT 461 (778)
Q Consensus 383 G~~i~iFgs~w~~~~~~~~~~~~~~l~l~p~~~~-~~~~pypfGiDPiW~~a~N~L~FlNS~kMklSIiiGvihm~~G~i 461 (778)
|+++|+|||+|.+.++.+.......+. .|..++ ..+.|||||+||+||.|.|+|.|+||||||||||+||+||+||++
T Consensus 474 Sks~niFgS~W~~~~~~~~~~~~e~~~-~p~~~~~~~~gpYPfGvDPiW~~a~N~L~FLNS~KMKmSIIlGi~hM~fGv~ 552 (829)
T KOG2189|consen 474 SKSMNIFGSSWSNPYNVTAVLCSEALL-TPEIGGAKFGGPYPFGVDPIWHLADNKLSFLNSMKMKMSIILGIIHMTFGVI 552 (829)
T ss_pred ccccccccCcccCccccchhccccccc-cCCCCcccccCCCCCcCChhhhcccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999997654322221122221 143332 245699999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCchhhhhhhhhHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCCCCCCChHHHHHHHhhhcCCCCCCCCCc
Q psy6250 462 LSVINHVHFRKPVNILLEFLPQLIFLVLLFGYMVTLMFMKWIMYAPQNPLLTSPRCAPSVLILFINMMLFKHSIPFPGCE 541 (778)
Q Consensus 462 L~~~N~i~~~~~~d~~~e~ip~llfl~~lfgYl~~lI~~KW~~~~~~~~~~~~~~~aPSll~~lInm~l~~~~~~~~~~~ 541 (778)
++++|+++||++.|++++||||++||.|+|||||++||||||.+|+. ++.||||||+++|||||+|++.+ +
T Consensus 553 lS~~N~~~Fk~~~~I~~~FIPq~iFl~~iFgYL~~~IiyKW~~~~~~-----~~~~aPslLi~lInMFl~~~~~~----~ 623 (829)
T KOG2189|consen 553 LSVFNHIYFKSKLDIILVFIPQLIFLLSLFGYLVFLIIYKWLVFWAK-----TSNCAPSLLIMLINMFLFPGTDA----G 623 (829)
T ss_pred HHHHHHHHhccchheeeeccHHHHHHHHHHHHHHHHHHHHHhhcccc-----cCCCCchHHHHHHHHHhCCCCCC----c
Confidence 99999999999999999999999999999999999999999999987 34689999999999999999875 2
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHhhccccchhhhhhchhhhhccccccCCCCCCccccCCCccchhhHHHHHhhhhcch
Q psy6250 542 EYMYESQHQVQTVLVLISLACIPVMLLGKPIYLIFFASKNKHKHQQVSNNGDLQGGIELHSNDEHQVQTVLVLISLACIP 621 (778)
Q Consensus 542 ~~ly~gQ~~vq~~l~~ia~~~vP~MLl~kPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (778)
.+|||||+.||.+|+++|++|||||||+||++++++ ++++.+ ..+ . ....+..+ .+
T Consensus 624 ~~lyp~Q~~vQ~~ll~~Al~cVPwmLl~KPl~l~~~--~~~r~~--e~~--~-~~~~~~~~--~~--------------- 679 (829)
T KOG2189|consen 624 FQLYPGQKQVQLILLVLALVCVPWMLLGKPLYLRRR--HKNRLR--ERH--Q-GQSAGRLD--ST--------------- 679 (829)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHhcchHHHHHH--hhhccc--ccc--c-cchhcccc--cc---------------
Confidence 499999999999999999999999999999999862 111100 000 0 00000000 00
Q ss_pred hhccCCchhhhhhhcccccccccccCCCCCCCCcccCCCCCCCCCCCCCCCCCCCChhhhhhhhheeeeccccccccchh
Q psy6250 622 VMLLGKPIYLIFFASKNKHKHQQVSNNGDLQGGIELHSNDEVLPSSPEGPEEEHEEPAEILIHQSIHTIEYVLSTISHTA 701 (778)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~ihq~IhTIEf~Lg~iSnTA 701 (778)
.....+..+ .+++..+.+++++++|+||||||||+|||||||||||||||
T Consensus 680 --------------------------~~~~~~~~~----~~~~~~~~~~~~~~e~~fseI~iHQaIHTIEf~LgcVShTA 729 (829)
T KOG2189|consen 680 --------------------------DGSVHGPTS----DAEDGGGVGDGEEEEFEFSEIFIHQAIHTIEFVLGCVSHTA 729 (829)
T ss_pred --------------------------cccccCCcc----ccccCCCCCCCCcCccchhhHHhhhhhhhhhhhhccccchH
Confidence 000000000 00000011234566889999999999999999999999999
Q ss_pred HHHHHhHhhcchhHHHHHHHHHHHHHhhhcCcccchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccceeeccc
Q psy6250 702 SYLRLWALSLAHAQLSEVLWNMVLKLGLQSESHAGAIMLYISFALWAMFTLAILVMMEGLSAFLHTLRLHWKERVF 777 (778)
Q Consensus 702 SYLRLWALSLAH~qLs~V~~~~~~~~~l~~~~~~g~i~~~~~f~~~a~~T~~iL~~Me~lsafLHaLRLhWVEfq~ 777 (778)
||||||||||||||||+|||+||+.+|+..+++.|.++++++|++||++|++||++|||||||||||||||||||+
T Consensus 730 SYLRLWALSLAHAQLSeVLW~Mvl~~g~~~~~~~g~i~~~~if~~f~~lTv~ILv~MEGLSAfLHaLRLHWVEFqs 805 (829)
T KOG2189|consen 730 SYLRLWALSLAHAQLSEVLWTMVLRIGLGLGGYVGVIGLVALFGVFAVLTVAILVLMEGLSAFLHALRLHWVEFQS 805 (829)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999988889899999999999999999999999999999999999997
|
|
| >PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
| >PRK05771 V-type ATP synthase subunit I; Validated | Back alignment and domain information |
|---|
| >COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG2189|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 778 | ||||
| 2nvj_A | 25 | Nmr Structures Of Transmembrane Segment From Subuni | 7e-05 | ||
| 2jtw_A | 25 | Solution Structure Of Tm7 Bound To Dpc Micelles Len | 4e-04 |
| >pdb|2NVJ|A Chain A, Nmr Structures Of Transmembrane Segment From Subunit A From The Yeast Proton V-Atpase Length = 25 | Back alignment and structure |
|
| >pdb|2JTW|A Chain A, Solution Structure Of Tm7 Bound To Dpc Micelles Length = 25 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 2e-36
Identities = 38/303 (12%), Positives = 67/303 (22%), Gaps = 45/303 (14%)
Query: 1 NHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHEIWNIFFGGRYIILLMGL 60
L S L + L+ + EK H + + I L+
Sbjct: 99 AVLRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLAALAHGL-DESPRLGVIPFLVA- 156
Query: 61 FSIYTGLIYNDFFSKSISVFGSAWKNNYNLSTIMENRDLILDPATSDYDQIPYPFVKFDY 120
+ A + +
Sbjct: 157 --------KPEELEAVRKALQEALADRF-------------------------------- 176
Query: 121 SLLFQGNEIYKTVFVAFFQGEQLKSRVKKVCSGFHASFYPCPSAHQERTDMVQGVKTRLE 180
L + E V + E +R G +P +K R
Sbjct: 177 VLEAEPLENQLAALVVVKRSELEAARSSLSRLGLAELRFPGAYGAMPLGKAAARMKERAR 236
Query: 181 DLNMVLNQTRDHRQRVLVSVAKELHAWSVMVRKMKAIYHTLNSFNMDVTKKCLIGECWVP 240
L R+ R+ + L A + A Y + +M K WVP
Sbjct: 237 LAPEELVGIREEVARLSRESGEALIALWTRAKDEVARYKAVA--DMAAGKYGAALMGWVP 294
Query: 241 VKHLTFVRLTLAEGSKAVGSSIPSFLNVIETNEMPPTFNQTNRFTQGFQNLIDSYGIATY 300
K V L + + ++ + P + + + F+ L Y
Sbjct: 295 QKAKGKVEEALGRLRDQIVYTFEP-VDEHHESHQVPVTLENPAWAKPFELLHGFLNTPAY 353
Query: 301 REL 303
Sbjct: 354 GSH 356
|
| >2nvj_A 25MER peptide from vacuolar ATP synthase subunit A, vacuolar isoform; ALFA helix, 3,10 helix, PI helix, hydrolase; NMR {Synthetic} Length = 26 | Back alignment and structure |
|---|
| >2jtw_A Transmembrane helix 7 of yeast vATPase; peptide, micelle-bound, membrane protein; NMR {Synthetic} PDB: 2rpw_X Length = 26 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 778 | |||
| 3rrk_A | 357 | V-type ATPase 116 kDa subunit; alpha beta fold, pr | 99.97 | |
| 2nvj_A | 26 | 25MER peptide from vacuolar ATP synthase subunit A | 99.71 | |
| 2jtw_A | 26 | Transmembrane helix 7 of yeast vATPase; peptide, m | 99.39 |
| >3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-32 Score=296.32 Aligned_cols=248 Identities=13% Similarity=0.081 Sum_probs=172.6
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhchhhhhhhcccccchHHHhhccccceEeeee-ecCcccccccccc
Q psy6250 3 LERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHEIWNIFFGGRYIILLMGLFSIYTGLI-YNDFFSKSISVFG 81 (778)
Q Consensus 3 ~~~~e~el~e~~~n~~~L~~~~~~L~E~k~VL~k~~~~~~e~~~~~~~~r~li~~m~~fs~~tG~I-~~~~~s~s~~~F~ 81 (778)
+++++++++++.++.++|+++..+|.+.+.+++....|-.. .+ ....|++++|+| .++. ...|+
T Consensus 101 ~~~l~~~~~~l~~~~~~L~~~~~~l~~~~~~l~~L~p~~~~-----ld------~~~~~g~~~g~ip~~~~----~~~~~ 165 (357)
T 3rrk_A 101 LRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLAALAHG-----LD------ESPRLGVIPFLVAKPEE----LEAVR 165 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----TT------TCTTEEEEEEEESCHHH----HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhhcc-----CC------ccceeeeeeEEecChhh----HHHHH
Confidence 67888999999999999999999999998888876654311 11 234789999999 7888 88888
Q ss_pred -cccc--ccccccccccccccccCCCCCCCCCCCcccccccccccccCcccccEEEEEEEeChhhHHHHHHhhcccccee
Q psy6250 82 -SAWK--NNYNLSTIMENRDLILDPATSDYDQIPYPFVKFDYSLLFQGNEIYKTVFVAFFQGEQLKSRVKKVCSGFHASF 158 (778)
Q Consensus 82 -~~wr--gn~~~~~~~~~~~~~lDP~~~~~~~~Pypf~~~d~~~~~tg~~~~k~vfii~~~g~~~~~kv~kI~~~f~~~~ 158 (778)
.+|+ ..+++.. .++...+++|+++++ +...++|++||+++|++.
T Consensus 166 ~~l~~~~~~~~~~~--------------------------------~~~~~~~~~~vv~~~-~~~~~~v~~il~s~~f~~ 212 (357)
T 3rrk_A 166 KALQEALADRFVLE--------------------------------AEPLENQLAALVVVK-RSELEAARSSLSRLGLAE 212 (357)
T ss_dssp HHHHHHHTTSCEEE--------------------------------EEECSSSEEEEEEEE-GGGHHHHHHHHHTTTCCB
T ss_pred HHHHHhcCCeEEEE--------------------------------eecCCCcEEEEEEEE-HHHHHHHHHHHHHCCCee
Confidence 8886 2222111 233345777877775 567889999999999999
Q ss_pred cCCCCChh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcEEEEE
Q psy6250 159 YPCPSAHQ--ERTDMVQGVKTRLEDLNMVLNQTRDHRQRVLVSVAKELHAWSVMVRKMKAIYHTLNSFNMDVTKKCLIGE 236 (778)
Q Consensus 159 ~~~p~~~~--~~~~~l~~l~~~i~~l~~~l~~~~~~~~~~l~~~~~~l~~w~~~v~k~k~iy~~LN~~~~~~t~~~~i~e 236 (778)
+++|+..+ .+.+.++++++|+++++++++++++++.++.......+..|...+++++++|+++|++ +.|++|++++
T Consensus 213 ~~~p~~~~~~~p~~~l~~l~~~i~~l~~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~ 290 (357)
T 3rrk_A 213 LRFPGAYGAMPLGKAAARMKERARLAPEELVGIREEVARLSRESGEALIALWTRAKDEVARYKAVADM--AAGKYGAALM 290 (357)
T ss_dssp CCCCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCCSEEEE
T ss_pred ccCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cccCcEEEEE
Confidence 99998777 8999999999999999999999999999999998899999999999999999999966 5789999999
Q ss_pred EeeecCCHHHHHHHHHccccccCCccceeeeccCCC---CCCCccccCCccchhHHHHHHhhcCCCCCccC
Q psy6250 237 CWVPVKHLTFVRLTLAEGSKAVGSSIPSFLNVIETN---EMPPTFNQTNRFTQGFQNLIDSYGIATYRELN 304 (778)
Q Consensus 237 GWvP~~~~~~i~~~L~~~~~~~~~~v~~~~~~~~~~---~~PPT~lknnkft~pFq~Ivd~YGiP~Y~EiD 304 (778)
||||++++++++++|++ ++ ..+...+.+++++ ++|||+++||+|++|||.||+|||+|+|+|+|
T Consensus 291 gWvp~~~~~~~~~~l~~-~~---~~~~~~~~~~~~~~~~~~pPt~l~n~~~~~~fe~iv~~Yg~p~Y~EiD 357 (357)
T 3rrk_A 291 GWVPQKAKGKVEEALGR-LR---DQIVYTFEPVDEHHESHQVPVTLENPAWAKPFELLHGFLNTPAYGSHD 357 (357)
T ss_dssp EEECTTTHHHHHHTCCS-SC---EEEEC-------------------------------------------
T ss_pred EEeeHHHHHHHHHHHHh-cC---CceEEEEecCCccccCCCcCEeccCCchhhHHHHHHHhcCCCCCCCCC
Confidence 99999999999999998 42 2456667777666 58999999999999999999999999999998
|
| >2jtw_A Transmembrane helix 7 of yeast vATPase; peptide, micelle-bound, membrane protein; NMR {Synthetic} PDB: 2rpw_X | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00