Psyllid ID: psy6272

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
MEEEQEPTPVVLLPWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIPTHSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAPIT
ccccccccccEEEcccccccccccccccccHHHHHHHHHHHcccccccccccccccEEEEEccccccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccccccccccccccEEEccccEEEEEccccccccccccEEEEEccccccccccccEEEEcccEEEEEEEEEccEEEEEEEEccEEccccccccccccccccccccccHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccEEEEccccHHHHHcHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccHHHccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHccccccEEEEcccHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHHcccccccccEEEEcccccccccccEEEEEEcccc
ccccccccccEEcccccccccccccccccHHHHHHHHHHHHHcccccccHHcccccEEEEEccccccHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccEcccccccccccccccccccEEEccccEEEEEccHHHHHcccccEEEEEcccccEEEccccEEEEcccEEEEEEEEcccEEEEEEcccEEcccccEEEccccccccccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHcccccccEEEEEEcccHHHHcHHHHHHHccEEEEEHHHHHHHcccccHHHHHHHHHHHHHHHcccEEEEcccccccHcccccccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHccccccEEEEEccHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccEEEEEEcccc
meeeqeptpvvllpwrkpdplappvnqvnAAFADRYLNHLEqlnldspvrgvnLTNIMAtvgennnsVDLIKLMLRSGvnilripthsskLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETkgtqlrtgklsrpsnvghgdnsySVEIAQGANIVLTANQLIETKGTVKRLFVdsmelpkrvipddivyiDRNIKLKVVekenndvhctvirggklmdnqlvtvprvtfnlpviadrdKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNkqgkpflvvgdilpdhnveeysdvsigdmndvnsivqdgADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLcalacppldpahSIVIACVNAALKCQAVAIIVITCSGYSAklvskyrpqcpilavssLGYVCRHLnvyrnirplhyirnpqadwsmdvDCRVQFAIQHGmeigiispgdplvlingwrkgagftnIMRVVYAPIT
meeeqeptpvvllpwrkpdpLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRipthssklyqVEKILKNVKLAIEEVSLEECKVVTCAVAietkgtqlrtgklsrpsnvghGDNSYSVEIAQGANIVLTANQLietkgtvkrlfvdsmelpkrvipddivyIDRNIklkvvekenndVHCTVirggklmdnqlVTVPRVTfnlpviadrdkhVVDLIVREAVDIIIMssvtgansiREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWrkgagftniMRVVYAPIT
MEEEQEPTPVVLLPWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIPTHSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAPIT
**********VLLPWRK**PLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIPTHSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQL****************SYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYA***
***********************************YLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIPTHSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACP*LDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAPI*
*********VVLLPWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIPTHSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAPIT
**********VLLPWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIPTHSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAPI*
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MEEEQEPTPVVLLPWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIPTHSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAPIT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query547 2.2.26 [Sep-21-2011]
O62619533 Pyruvate kinase OS=Drosop yes N/A 0.939 0.964 0.357 6e-79
P53657574 Pyruvate kinase isozymes yes N/A 0.926 0.883 0.340 2e-75
P12928574 Pyruvate kinase isozymes yes N/A 0.926 0.883 0.338 3e-75
P30613574 Pyruvate kinase isozymes yes N/A 0.926 0.883 0.334 3e-75
Q29536574 Pyruvate kinase isozymes yes N/A 0.926 0.883 0.330 4e-74
P14618531 Pyruvate kinase isozymes no N/A 0.932 0.960 0.327 5e-74
Q92122527 Pyruvate kinase muscle is N/A N/A 0.932 0.967 0.329 2e-73
P11979531 Pyruvate kinase isozyme M N/A N/A 0.932 0.960 0.321 2e-72
Q5NVN0531 Pyruvate kinase isozyme M yes N/A 0.932 0.960 0.318 6e-72
P11980531 Pyruvate kinase isozymes no N/A 0.946 0.975 0.320 2e-71
>sp|O62619|KPYK_DROME Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=2 SV=2 Back     alignment and function desciption
 Score =  295 bits (755), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 191/535 (35%), Positives = 300/535 (56%), Gaps = 21/535 (3%)

Query: 14  PWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKL 73
           P  KP+     V Q  AA AD  L H+ +L  DSPV  V L+ I+ T+G  ++SV++++ 
Sbjct: 11  PQLKPNE----VPQNMAAGADTQLEHMCRLQFDSPVPHVRLSGIVCTIGPASSSVEMLEK 66

Query: 74  MLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTG 132
           M+ +G+NI R+  +H S  Y    +  NV+ A++  S +       A+A++TKG ++RTG
Sbjct: 67  MMATGMNIARMNFSHGSHEYHAATV-ANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTG 125

Query: 133 KLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVY 192
            +        G  +  +E+ +G  I LT N+    KG+++ ++VD   +   V P + V+
Sbjct: 126 LIG-------GSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVF 178

Query: 193 IDRN-IKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVRE 251
           +D   I L V E   + + C V  GG L   + V +P V  +LP ++++DK  +   V +
Sbjct: 179 VDDGLISLIVREVGKDSLTCEVENGGSLGSRKGVNLPGVPVDLPAVSEKDKSDLLFGVEQ 238

Query: 252 AVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRI 311
            VD+I  S +  A ++ E+R +L +    + I++KIE   GM  +DEII   DG+++ R 
Sbjct: 239 EVDMIFASFIRNAAALTEIRKVLGEKGKNIKIISKIENQQGMHNLDEIIEAGDGIMVARG 298

Query: 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ 371
            L +    E  FLAQK + ARCNK GKP +    +L   ++ +    +  +++DV + V 
Sbjct: 299 DLGIEIPAEKVFLAQKAMIARCNKAGKPVICATQML--ESMVKKPRPTRAEISDVANAVL 356

Query: 372 DGADVVVLT----QSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIV 427
           DGAD V+L+    + E     V  + +  K+ E+ LW + +F DL   A   +D +H+  
Sbjct: 357 DGADCVMLSGETAKGEYPLECVLTMAKTCKEAEAALWHQNLFNDLVRGAGT-IDASHAAA 415

Query: 428 IACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLH 487
           IA V AA K +A AI+VIT SG SA  VSKYRP+CPI+AV+      R  ++YR + PL 
Sbjct: 416 IAAVEAATKAKASAIVVITTSGKSAFQVSKYRPRCPIIAVTRFAQTARQAHLYRGLVPLI 475

Query: 488 YIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVV 542
           Y      DW  DVD RVQF +Q G + G I  GD +V++ GW++G+GFTN +R+V
Sbjct: 476 YKEPGLGDWLKDVDVRVQFGLQVGKKNGFIKTGDSVVVVTGWKQGSGFTNTIRIV 530

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4EC: 0
>sp|P53657|KPYR_MOUSE Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pklr PE=2 SV=1 Back     alignment and function description
>sp|P12928|KPYR_RAT Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2 Back     alignment and function description
>sp|P30613|KPYR_HUMAN Pyruvate kinase isozymes R/L OS=Homo sapiens GN=PKLR PE=1 SV=2 Back     alignment and function description
>sp|Q29536|KPYR_CANFA Pyruvate kinase isozymes R/L OS=Canis familiaris GN=PKLR PE=2 SV=2 Back     alignment and function description
>sp|P14618|KPYM_HUMAN Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM PE=1 SV=4 Back     alignment and function description
>sp|Q92122|KPYK_XENLA Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1 Back     alignment and function description
>sp|P11979|KPYM_FELCA Pyruvate kinase isozyme M1/M2 OS=Felis catus GN=PKM PE=1 SV=2 Back     alignment and function description
>sp|Q5NVN0|KPYM_PONAB Pyruvate kinase isozyme M1/M2 OS=Pongo abelii GN=PKM PE=2 SV=3 Back     alignment and function description
>sp|P11980|KPYM_RAT Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
345489900579 PREDICTED: pyruvate kinase isoform 1 [Na 0.946 0.894 0.357 1e-88
345489898567 PREDICTED: pyruvate kinase isoform 2 [Na 0.914 0.881 0.364 1e-88
345489902520 PREDICTED: pyruvate kinase isoform 3 [Na 0.914 0.961 0.364 1e-88
307177342 1079 Pyruvate kinase [Camponotus floridanus] 0.937 0.475 0.364 4e-88
307207885619 Pyruvate kinase [Harpegnathos saltator] 0.948 0.838 0.347 3e-87
389609065528 pyruvate kinase [Papilio xuthus] 0.930 0.964 0.350 2e-86
91094451536 PREDICTED: similar to pyruvate kinase is 0.930 0.949 0.359 2e-86
347972245518 AGAP004596-PA [Anopheles gambiae str. PE 0.908 0.959 0.358 3e-86
322786327543 hypothetical protein SINV_09693 [Solenop 0.925 0.931 0.354 4e-86
328704551567 PREDICTED: pyruvate kinase-like isoform 0.948 0.915 0.350 6e-85
>gi|345489900|ref|XP_001600651.2| PREDICTED: pyruvate kinase isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 191/534 (35%), Positives = 298/534 (55%), Gaps = 16/534 (2%)

Query: 15  WRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLM 74
           W   D          A  A  +L+H+  L++DS      L+ I+ T+G  + SV++++ M
Sbjct: 53  WITADDKMAGKPNFTAQNAQSHLDHMCALDIDSHTLFTRLSGIICTIGPVSRSVEMLEQM 112

Query: 75  LRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGK 133
           + +G+N+ R+  +H S  Y  E I  NV+ A + ++ +    V  A+A++TKG ++RTG 
Sbjct: 113 IETGMNVARMNFSHGSHEYHAETI-ANVRQAQKNLTEKNGFCVPVAIALDTKGPEIRTGL 171

Query: 134 LSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYI 193
           L        G  S  VE+ +G    LT ++    KG    ++VD   + K +   + VY+
Sbjct: 172 L-------EGGGSAEVELKKGQTFKLTTDKAYAEKGNADTVYVDYANISKVLQKGNRVYV 224

Query: 194 DRNI-KLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREA 252
           D  +  L V    +N +  TV  GG L   + V +P V  +LP ++++DK  +   V + 
Sbjct: 225 DDGLMSLIVTGVSDNTITTTVENGGTLGSRKGVNLPGVPVDLPAVSEKDKSDLQFGVEQE 284

Query: 253 VDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQ 312
           VD+I  S +  A ++ E+R +L D    + I++KIE   GM  +DEII  SDG+++ R  
Sbjct: 285 VDMIFASFIRNAAALTEIRSILGDKGKNIKIISKIENQQGMTNLDEIIEASDGIMVARGD 344

Query: 313 LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD 372
           L +    E  FLAQK + +RCNK GKP +    +L   ++ +    +  + +DV + + D
Sbjct: 345 LGIEIPPEKVFLAQKCMISRCNKVGKPVICATQML--ESMVKKPRATRAESSDVANAILD 402

Query: 373 GADVVVLT----QSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVI 428
           GAD V+L+    + E     V  +  I K+ E+V+W+ Q+F DL   A PP+D  H++ I
Sbjct: 403 GADCVMLSGETAKGEYPLECVRTMANICKEAEAVIWQNQLFADLSNKAVPPIDATHAVAI 462

Query: 429 ACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHY 488
           A V AA KC A AIIVIT SG SA L+SKYRP+CPI+AV+    V R  ++YR I PLHY
Sbjct: 463 ASVEAAAKCLASAIIVITTSGRSAHLISKYRPRCPIIAVTRFHQVARQAHLYRGILPLHY 522

Query: 489 IRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVV 542
              P +DW  DVD RVQ+ +  G   G +  GD +V++ GW++G+GFTN +R+V
Sbjct: 523 TEAPLSDWLKDVDIRVQYGLNFGKGRGFVRTGDSVVIVTGWKQGSGFTNTLRIV 576

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345489898|ref|XP_003426257.1| PREDICTED: pyruvate kinase isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|345489902|ref|XP_003426258.1| PREDICTED: pyruvate kinase isoform 3 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307177342|gb|EFN66515.1| Pyruvate kinase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307207885|gb|EFN85446.1| Pyruvate kinase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|389609065|dbj|BAM18144.1| pyruvate kinase [Papilio xuthus] Back     alignment and taxonomy information
>gi|91094451|ref|XP_966698.1| PREDICTED: similar to pyruvate kinase isoform 1 [Tribolium castaneum] gi|270000746|gb|EEZ97193.1| hypothetical protein TcasGA2_TC004380 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|347972245|ref|XP_315228.5| AGAP004596-PA [Anopheles gambiae str. PEST] gi|333469340|gb|EAA10555.6| AGAP004596-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|322786327|gb|EFZ12877.1| hypothetical protein SINV_09693 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|328704551|ref|XP_003242527.1| PREDICTED: pyruvate kinase-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
FB|FBgn0003178533 PyK "Pyruvate kinase" [Drosoph 0.939 0.964 0.355 8.7e-79
WB|WBGene00009126913 pyk-1 [Caenorhabditis elegans 0.910 0.545 0.355 3.5e-75
FB|FBgn0031462554 CG2964 [Drosophila melanogaste 0.901 0.889 0.326 6.7e-72
UNIPROTKB|P30613574 PKLR "Pyruvate kinase isozymes 0.923 0.879 0.342 1.4e-71
RGD|3336574 Pklr "pyruvate kinase, liver a 0.925 0.881 0.340 2.3e-71
MGI|MGI:97604574 Pklr "pyruvate kinase liver an 0.925 0.881 0.340 4.8e-71
UNIPROTKB|P14618531 PKM "Pyruvate kinase isozymes 0.928 0.956 0.328 7.7e-71
UNIPROTKB|H9KUV5586 PKLR "Pyruvate kinase" [Canis 0.925 0.863 0.331 4.3e-70
UNIPROTKB|Q29536574 PKLR "Pyruvate kinase isozymes 0.925 0.881 0.331 4.3e-70
UNIPROTKB|F1SHL9540 PKM "Pyruvate kinase" [Sus scr 0.928 0.940 0.325 1.4e-69
FB|FBgn0003178 PyK "Pyruvate kinase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
 Identities = 190/535 (35%), Positives = 304/535 (56%)

Query:    14 PWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKL 73
             P  KP+ +  P N   AA AD  L H+ +L  DSPV  V L+ I+ T+G  ++SV++++ 
Sbjct:    11 PQLKPNEV--PQNM--AAGADTQLEHMCRLQFDSPVPHVRLSGIVCTIGPASSSVEMLEK 66

Query:    74 MLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTG 132
             M+ +G+NI R+  +H S  Y    +  NV+ A++  S +       A+A++TKG ++RTG
Sbjct:    67 MMATGMNIARMNFSHGSHEYHAATVA-NVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTG 125

Query:   133 KLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVY 192
              +        G  +  +E+ +G  I LT N+    KG+++ ++VD   +   V P + V+
Sbjct:   126 LIG-------GSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVF 178

Query:   193 IDRN-IKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVRE 251
             +D   I L V E   + + C V  GG L   + V +P V  +LP ++++DK  +   V +
Sbjct:   179 VDDGLISLIVREVGKDSLTCEVENGGSLGSRKGVNLPGVPVDLPAVSEKDKSDLLFGVEQ 238

Query:   252 AVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRI 311
              VD+I  S +  A ++ E+R +L +    + I++KIE   GM  +DEII   DG+++ R 
Sbjct:   239 EVDMIFASFIRNAAALTEIRKVLGEKGKNIKIISKIENQQGMHNLDEIIEAGDGIMVARG 298

Query:   312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ 371
              L +    E  FLAQK + ARCNK GKP +    +L +  V++       +++DV + V 
Sbjct:   299 DLGIEIPAEKVFLAQKAMIARCNKAGKPVICATQML-ESMVKKPRPTR-AEISDVANAVL 356

Query:   372 DGADVVVLT-QSEQAHHRVDI---LKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIV 427
             DGAD V+L+ ++ +  + ++    + +  K+ E+ LW + +F DL   A   +D +H+  
Sbjct:   357 DGADCVMLSGETAKGEYPLECVLTMAKTCKEAEAALWHQNLFNDLVRGA-GTIDASHAAA 415

Query:   428 IACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLH 487
             IA V AA K +A AI+VIT SG SA  VSKYRP+CPI+AV+      R  ++YR + PL 
Sbjct:   416 IAAVEAATKAKASAIVVITTSGKSAFQVSKYRPRCPIIAVTRFAQTARQAHLYRGLVPLI 475

Query:   488 YIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVV 542
             Y      DW  DVD RVQF +Q G + G I  GD +V++ GW++G+GFTN +R+V
Sbjct:   476 YKEPGLGDWLKDVDVRVQFGLQVGKKNGFIKTGDSVVVVTGWKQGSGFTNTIRIV 530
GO:0004743 "pyruvate kinase activity" evidence=ISS;IMP;NAS
GO:0016310 "phosphorylation" evidence=ISS
GO:0006096 "glycolysis" evidence=IEA;NAS
GO:0005829 "cytosol" evidence=IDA
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0030955 "potassium ion binding" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
WB|WBGene00009126 pyk-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0031462 CG2964 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P30613 PKLR "Pyruvate kinase isozymes R/L" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|3336 Pklr "pyruvate kinase, liver and RBC" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:97604 Pklr "pyruvate kinase liver and red blood cell" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P14618 PKM "Pyruvate kinase isozymes M1/M2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H9KUV5 PKLR "Pyruvate kinase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q29536 PKLR "Pyruvate kinase isozymes R/L" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SHL9 PKM "Pyruvate kinase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P30614KPYK_YARLI2, ., 7, ., 1, ., 4, 00.29670.89030.9456yesN/A
P30613KPYR_HUMAN2, ., 7, ., 1, ., 4, 00.33460.92680.8832yesN/A
Q29536KPYR_CANFA2, ., 7, ., 1, ., 4, 00.33070.92680.8832yesN/A
P12928KPYR_RAT2, ., 7, ., 1, ., 4, 00.33840.92680.8832yesN/A
P00548KPYK_CHICK2, ., 7, ., 1, ., 4, 00.31810.93230.9622yesN/A
Q875M9KPYK_KLULA2, ., 7, ., 1, ., 4, 00.26190.86280.9421yesN/A
Q5NVN0KPYM_PONAB2, ., 7, ., 1, ., 4, 00.31810.93230.9604yesN/A
Q6FV12KPYK2_CANGA2, ., 7, ., 1, ., 4, 00.26010.89570.9645yesN/A
O62619KPYK_DROME2, ., 7, ., 1, ., 4, 00.35700.93960.9643yesN/A
Q10208KPYK_SCHPO2, ., 7, ., 1, ., 4, 00.28110.86470.9292yesN/A
Q54RF5KPYK_DICDI2, ., 7, ., 1, ., 4, 00.28840.87020.9388yesN/A
P22360KPYK_EMENI2, ., 7, ., 1, ., 4, 00.30580.87380.9087yesN/A
Q759A9KPYK_ASHGO2, ., 7, ., 1, ., 4, 00.27130.88660.9680yesN/A
O65595KPYC_ARATH2, ., 7, ., 1, ., 4, 00.270.83360.9175yesN/A
Q12669KPYK_ASPNG2, ., 7, ., 1, ., 4, 00.30580.87380.9087yesN/A
P53657KPYR_MOUSE2, ., 7, ., 1, ., 4, 00.34030.92680.8832yesN/A
P00549KPYK1_YEAST2, ., 7, ., 1, ., 4, 00.26790.89030.974yesN/A
Q6BS75KPYK_DEBHA2, ., 7, ., 1, ., 4, 00.27790.89390.9702yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.400.824
3rd Layer2.7.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
cd00288480 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): La 3e-91
TIGR01064473 TIGR01064, pyruv_kin, pyruvate kinase 2e-69
COG0469477 COG0469, PykF, Pyruvate kinase [Carbohydrate trans 1e-59
PTZ00066513 PTZ00066, PTZ00066, pyruvate kinase; Provisional 4e-56
PLN02461511 PLN02461, PLN02461, Probable pyruvate kinase 7e-52
PTZ00300454 PTZ00300, PTZ00300, pyruvate kinase; Provisional 8e-52
PRK05826465 PRK05826, PRK05826, pyruvate kinase; Provisional 2e-50
PLN02765526 PLN02765, PLN02765, pyruvate kinase 5e-47
pfam00224348 pfam00224, PK, Pyruvate kinase, barrel domain 8e-45
PRK06354 590 PRK06354, PRK06354, pyruvate kinase; Provisional 3e-40
PRK09206470 PRK09206, PRK09206, pyruvate kinase; Provisional 6e-38
PRK06247476 PRK06247, PRK06247, pyruvate kinase; Provisional 5e-29
pfam02887117 pfam02887, PK_C, Pyruvate kinase, alpha/beta domai 2e-28
PLN02762509 PLN02762, PLN02762, pyruvate kinase complex alpha 1e-24
PLN02623581 PLN02623, PLN02623, pyruvate kinase 2e-24
PRK06739352 PRK06739, PRK06739, pyruvate kinase; Validated 3e-16
PRK08187493 PRK08187, PRK08187, pyruvate kinase; Validated 1e-06
PRK14725608 PRK14725, PRK14725, pyruvate kinase; Provisional 0.001
>gnl|CDD|238178 cd00288, Pyruvate_Kinase, Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information 
 Score =  287 bits (737), Expect = 3e-91
 Identities = 160/506 (31%), Positives = 266/506 (52%), Gaps = 45/506 (8%)

Query: 55  TNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEEC 113
           T I+ T+G   +SV+ +K ++++G+N+ R+  +H S  Y   +I  NV+ A E+      
Sbjct: 4   TKIVCTIGPATDSVENLKKLIKAGMNVARMNFSHGSHEYHQSRI-DNVREAAEKTG---- 58

Query: 114 KVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKR 173
                A+A++TKG ++RTG                + +  G   ++T +     KGT ++
Sbjct: 59  --GPVAIALDTKGPEIRTGLFK---------GGKDISLKAGDKFLVTTDP-AAKKGTKEK 106

Query: 174 LFVDSMELPKRVIPDDIVYIDRN-IKLKVVEKENND-VHCTVIRGGKLMDNQLVTVPRVT 231
           ++VD   L K V P + + +D   + LKV+ K+++  + C V+ GG L   + V +P   
Sbjct: 107 IYVDYKNLTKDVSPGNTILVDDGLLSLKVLSKDDDKTLVCEVLNGGVLGSRKGVNLPGTD 166

Query: 232 FNLPVIADRDKHVVDLI--VREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIET 289
            +LP ++++DK   DL   V + VD+I  S V  A+ + E+R +L +    + I+AKIE 
Sbjct: 167 VDLPALSEKDK--ADLRFGVEQGVDMIFASFVRKASDVLEIREVLGEKGKDIKIIAKIEN 224

Query: 290 LLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDIL-- 347
             G+   DEI+  SDG+++ R  L V    E  FLAQKM+ A+CN  GKP +    +L  
Sbjct: 225 QEGVNNFDEILEASDGIMVARGDLGVEIPAEEVFLAQKMLIAKCNLAGKPVITATQMLES 284

Query: 348 ----PDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHR-----VDILKEILKK 398
               P     E SDV+       N+++ DG D V+L+  E A  +     V  +  I  +
Sbjct: 285 MIYNPRPTRAEVSDVA-------NAVL-DGTDCVMLS-GETAKGKYPVEAVKAMARICLE 335

Query: 399 TESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKY 458
            E  L  + +F ++  L   P     ++ ++ V AA +  A AI+V+T SG +A+LVSKY
Sbjct: 336 AEKALSHRVLFNEMRRLTPRPTSTTEAVAMSAVRAAFELGAKAIVVLTTSGRTARLVSKY 395

Query: 459 RPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIIS 518
           RP  PI+AV+      R L++YR + P+ +   P+  W  D D R++ A+    E G++ 
Sbjct: 396 RPNAPIIAVTRNEQTARQLHLYRGVYPVLF-EEPKPGWQEDTDARLKAAVNVAKEKGLLK 454

Query: 519 PGDPLVLINGWRKGAGFTNIMRVVYA 544
            GD +V++ GW  G+G TN MR++  
Sbjct: 455 KGDLVVVVQGWPVGSGSTNTMRILTV 480

Like other allosteric enzymes, PK has a high substrate affinity R state and a low affinity T state. PK exists as several different isozymes, depending on organism and tissue type. In mammals, there are four PK isozymes: R, found in red blood cells, L, found in liver, M1, found in skeletal muscle, and M2, found in kidney, adipose tissue, and lung. PK forms a homotetramer, with each subunit containing three domains. The T state to R state transition of PK is more complex than in most allosteric enzymes, involving a concerted rotation of all 3 domains of each monomer in the homotetramer. Length = 480
>gnl|CDD|233257 TIGR01064, pyruv_kin, pyruvate kinase Back     alignment and domain information
>gnl|CDD|223545 COG0469, PykF, Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|173361 PTZ00066, PTZ00066, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215255 PLN02461, PLN02461, Probable pyruvate kinase Back     alignment and domain information
>gnl|CDD|140321 PTZ00300, PTZ00300, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|235619 PRK05826, PRK05826, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|215409 PLN02765, PLN02765, pyruvate kinase Back     alignment and domain information
>gnl|CDD|215802 pfam00224, PK, Pyruvate kinase, barrel domain Back     alignment and domain information
>gnl|CDD|235784 PRK06354, PRK06354, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|181699 PRK09206, PRK09206, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|180487 PRK06247, PRK06247, pyruvate kinase; Provisional Back     alignment and domain information
>gnl|CDD|217269 pfam02887, PK_C, Pyruvate kinase, alpha/beta domain Back     alignment and domain information
>gnl|CDD|215407 PLN02762, PLN02762, pyruvate kinase complex alpha subunit Back     alignment and domain information
>gnl|CDD|215334 PLN02623, PLN02623, pyruvate kinase Back     alignment and domain information
>gnl|CDD|180676 PRK06739, PRK06739, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|236178 PRK08187, PRK08187, pyruvate kinase; Validated Back     alignment and domain information
>gnl|CDD|237804 PRK14725, PRK14725, pyruvate kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 547
PTZ00066513 pyruvate kinase; Provisional 100.0
PLN02762509 pyruvate kinase complex alpha subunit 100.0
PLN02461511 Probable pyruvate kinase 100.0
PRK09206470 pyruvate kinase; Provisional 100.0
PRK06247476 pyruvate kinase; Provisional 100.0
PLN02765526 pyruvate kinase 100.0
cd00288480 Pyruvate_Kinase Pyruvate kinase (PK): Large allost 100.0
COG0469477 PykF Pyruvate kinase [Carbohydrate transport and m 100.0
PRK06354 590 pyruvate kinase; Provisional 100.0
PRK05826465 pyruvate kinase; Provisional 100.0
PLN02623581 pyruvate kinase 100.0
KOG2323|consensus501 100.0
PTZ00300454 pyruvate kinase; Provisional 100.0
TIGR01064473 pyruv_kin pyruvate kinase. This enzyme is a homote 100.0
PF00224348 PK: Pyruvate kinase, barrel domain; InterPro: IPR0 100.0
PRK06739352 pyruvate kinase; Validated 100.0
PRK14725608 pyruvate kinase; Provisional 100.0
PRK08187493 pyruvate kinase; Validated 100.0
PF02887117 PK_C: Pyruvate kinase, alpha/beta domain; InterPro 99.96
TIGR03239249 GarL 2-dehydro-3-deoxyglucarate aldolase. In E. co 99.73
PRK10558256 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Pro 99.72
PRK10128267 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional 99.71
COG3836255 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.7
TIGR02311249 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldola 99.63
PF03328221 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family 99.5
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 99.37
PRK06464795 phosphoenolpyruvate synthase; Validated 99.36
TIGR01588288 citE citrate lyase, beta subunit. This is a model 99.28
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 99.26
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 99.18
COG2301283 CitE Citrate lyase beta subunit [Carbohydrate tran 98.64
PF02896293 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel 98.46
cd00727511 malate_synt_A Malate synthase A (MSA), present in 98.17
cd00480511 malate_synt Malate synthase catalyzes the Claisen 98.04
TIGR01344511 malate_syn_A malate synthase A. This model represe 98.03
PRK09255531 malate synthase; Validated 97.97
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 97.68
PLN02626551 malate synthase 97.38
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 97.25
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 97.19
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 97.13
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 96.72
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 96.62
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 96.55
PRK09279879 pyruvate phosphate dikinase; Provisional 96.54
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 96.45
TIGR02751506 PEPCase_arch phosphoenolpyruvate carboxylase, arch 96.23
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 96.22
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 96.17
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 95.82
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 95.78
PLN02274505 inosine-5'-monophosphate dehydrogenase 95.58
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 95.42
PRK13655494 phosphoenolpyruvate carboxylase; Provisional 95.36
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 95.25
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 94.75
COG3605756 PtsP Signal transduction protein containing GAF an 94.66
COG0574740 PpsA Phosphoenolpyruvate synthase/pyruvate phospha 94.62
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 94.61
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 94.36
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 94.34
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 94.14
PRK00009 911 phosphoenolpyruvate carboxylase; Reviewed 94.14
PTZ00398 974 phosphoenolpyruvate carboxylase; Provisional 94.02
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 93.88
PRK05286344 dihydroorotate dehydrogenase 2; Reviewed 93.84
PRK13125244 trpA tryptophan synthase subunit alpha; Provisiona 93.82
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 93.65
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 93.59
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 93.21
PRK02290344 3-dehydroquinate synthase; Provisional 93.13
PRK15452 443 putative protease; Provisional 93.12
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 92.86
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 92.82
COG0826347 Collagenase and related proteases [Posttranslation 92.62
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 92.49
KOG2550|consensus503 92.14
PRK15447301 putative protease; Provisional 92.12
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 91.95
cd02809299 alpha_hydroxyacid_oxid_FMN Family of homologous FM 91.85
COG1751186 Uncharacterized conserved protein [Function unknow 91.81
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 91.6
PRK08883220 ribulose-phosphate 3-epimerase; Provisional 91.44
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 90.85
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 90.52
PLN02826409 dihydroorotate dehydrogenase 90.45
PF14010491 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3 90.17
PF01959354 DHQS: 3-dehydroquinate synthase (EC 4.6.1.3); Inte 90.16
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 89.97
cd04738327 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) cl 89.75
cd04739325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 89.61
TIGR01037300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 89.37
PLN02591250 tryptophan synthase 88.96
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 88.94
PRK05581220 ribulose-phosphate 3-epimerase; Validated 88.75
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 88.73
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 88.71
cd00429211 RPE Ribulose-5-phosphate 3-epimerase (RPE). This e 88.32
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 88.32
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 88.23
cd02922344 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding dom 88.17
cd04742418 NPD_FabD 2-Nitropropane dioxygenase (NPD)-like dom 87.89
COG1465376 Predicted alternative 3-dehydroquinate synthase [A 87.54
TIGR02320285 PEP_mutase phosphoenolpyruvate phosphomutase. A cl 87.47
PTZ00170228 D-ribulose-5-phosphate 3-epimerase; Provisional 87.04
PLN02334229 ribulose-phosphate 3-epimerase 86.81
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 86.77
TIGR01036335 pyrD_sub2 dihydroorotate dehydrogenase, subfamily 86.72
PRK00694 606 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 86.61
PF03060330 NMO: Nitronate monooxygenase; InterPro: IPR004136 86.6
cd00377243 ICL_PEPM Members of the ICL/PEPM enzyme family cat 86.41
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 86.11
PRK13307391 bifunctional formaldehyde-activating enzyme/3-hexu 85.86
PF00311 794 PEPcase: Phosphoenolpyruvate carboxylase; InterPro 85.71
TIGR00262256 trpA tryptophan synthase, alpha subunit. Tryptopha 85.64
PF00290259 Trp_syntA: Tryptophan synthase alpha chain; InterP 85.6
PLN02495385 oxidoreductase, acting on the CH-CH group of donor 85.41
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 85.17
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 85.06
COG0434263 SgcQ Predicted TIM-barrel enzyme [General function 84.35
TIGR00612346 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-dipho 84.28
PRK13398266 3-deoxy-7-phosphoheptulonate synthase; Provisional 84.17
TIGR02814444 pfaD_fam PfaD family protein. The protein PfaD is 83.81
PRK08745223 ribulose-phosphate 3-epimerase; Provisional 83.56
PRK02048 611 4-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha 83.29
cd04737351 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding d 83.14
PRK13813215 orotidine 5'-phosphate decarboxylase; Provisional 83.01
cd02811326 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl di 82.7
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 82.17
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 82.13
PF01180295 DHO_dh: Dihydroorotate dehydrogenase; InterPro: IP 82.01
PRK14045329 1-aminocyclopropane-1-carboxylate deaminase; Provi 81.97
COG2352 910 Ppc Phosphoenolpyruvate carboxylase [Energy produc 81.95
PRK00915 513 2-isopropylmalate synthase; Validated 81.87
TIGR00973 494 leuA_bact 2-isopropylmalate synthase, bacterial ty 81.72
TIGR00007230 phosphoribosylformimino-5-aminoimidazole carboxami 81.43
cd04741294 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) c 81.42
PRK03620303 5-dehydro-4-deoxyglucarate dehydratase; Provisiona 81.31
cd00954288 NAL N-Acetylneuraminic acid aldolase, also called 80.6
PF01274526 Malate_synthase: Malate synthase; InterPro: IPR001 80.38
COG2870467 RfaE ADP-heptose synthase, bifunctional sugar kina 80.29
PRK07028430 bifunctional hexulose-6-phosphate synthase/ribonuc 80.23
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 80.09
TIGR00674285 dapA dihydrodipicolinate synthase. Dihydrodipicoli 80.04
>PTZ00066 pyruvate kinase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-125  Score=1020.69  Aligned_cols=479  Identities=27%  Similarity=0.438  Sum_probs=443.4

Q ss_pred             hHHHhhhhcCC-CCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhcccc
Q psy6272          35 RYLNHLEQLNL-DSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEE  112 (547)
Q Consensus        35 ~~l~h~~~l~i-~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~  112 (547)
                      +.+.|.+.|++ ...+..+|+|||||||||+|+++|+|++|+++|||+|||| |||++|+|.+ +++++|+++++..   
T Consensus        19 ~~~~~~~~~~~~~~~~~~~rktKIi~TiGPas~~~e~l~~mi~aGm~v~RlN~SHg~~e~~~~-~i~~vR~~~~~~~---   94 (513)
T PTZ00066         19 TNISLDKILEPISDNDLRQKKTHIVCTMGPACKNVETLVKLIDAGMNICRFNFSHGDHESHKK-TLNNVREAAKARP---   94 (513)
T ss_pred             cccchhhhccccccCcccCCCCeEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHhcC---
Confidence            44556666776 4455678999999999999999999999999999999999 9999999999 9999999998741   


Q ss_pred             ccceeeEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEE
Q psy6272         113 CKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVY  192 (547)
Q Consensus       113 ~~~~~i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~  192 (547)
                        +++++|++||+|||||+|.+.       ++  .++.|++||.++|+.+..  ..++++.|+++|++|++.+++||+||
T Consensus        95 --~~~iaIl~Dl~GPkiR~g~~~-------~~--~~i~l~~G~~~~l~~~~~--~~~~~~~i~v~~~~l~~~v~~Gd~Il  161 (513)
T PTZ00066         95 --NANLGILLDTKGPEIRTGFLK-------NH--KPITLKEGQTLKITTDYT--FLGDETCISCSYKKLPQSVKVGNIIL  161 (513)
T ss_pred             --CCceEEEeeCCCCceeecccC-------CC--CeEEeCCCCEEEEecCCc--cCCCCcEEecchHHHHhhccCCCEEE
Confidence              589999999999999999997       42  369999999999998743  35677899999999999999999999


Q ss_pred             Eec-eeEEEEEEEeCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHH-HHHHHcCCcEEEEcccCChhhHHHH
Q psy6272         193 IDR-NIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVV-DLIVREAVDIIIMSSVTGANSIREM  270 (547)
Q Consensus       193 idD-~I~l~V~~v~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di-~~~~~~g~d~I~~sfV~sa~di~~~  270 (547)
                      +|| +|.|+|.+++++.+.|+|.+||.|+++||+||||+.+++|++|++|++|| +|++++|+|+|++|||++++|++++
T Consensus       162 idDG~i~l~V~~~~~~~v~~~v~~gG~l~~~Kgvnlpg~~~~lp~ltekD~~dI~~f~~~~~vD~IalSFVr~a~DI~~~  241 (513)
T PTZ00066        162 IADGSLSCKVLEVHDDYIITKVLNNATIGERKNMNLPGVKVELPVIGEKDKNDILNFAIPMGCDFIALSFVQSADDVRLC  241 (513)
T ss_pred             EeCCEEEEEEEEEECCEEEEEEEeCcEEcCCcccccCCCccCCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHH
Confidence            999 99999999999999999999999999999999999999999999999998 8999999999999999999999999


Q ss_pred             HHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC--
Q psy6272         271 RGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP--  348 (547)
Q Consensus       271 r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le--  348 (547)
                      |++|++.|.+++|||||||++|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+||||||  
T Consensus       242 r~~l~~~g~~~~IiAKIE~~~av~NldeIl~~sDGIMVARGDLGvEip~e~vp~~QK~II~~c~~~gkPVIvATQmLeSM  321 (513)
T PTZ00066        242 RQLLGERGRHIKIIPKIENIEGLINFDEILAESDGIMVARGDLGMEIPPEKVFLAQKMMISKCNVAGKPVITATQMLESM  321 (513)
T ss_pred             HHHHHhCCCCceEEEEECCHHHHHHHHHHHHhcCEEEEEccccccccChHHcchHHHHHHHHHHHhCCCEEEechhHHHH
Confidence            999999888999999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             ----CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCC
Q psy6272         349 ----DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPP  419 (547)
Q Consensus       349 ----~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~  419 (547)
                          +|||||+        +||||||+||+||+||| ||||.     |||++|++||+++|+.++|..+|.........+
T Consensus       322 i~np~PTRAEv--------sDVaNAV~DG~DavMLS-gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~  392 (513)
T PTZ00066        322 IKNPRPTRAES--------TDVANAVLDGTDCVMLS-GETANGKFPVEAVNIMAKICFEAETCIDYRVLYHAIHLAVPTP  392 (513)
T ss_pred             hhCCCCchHHH--------HHHHHHHHhCCcEEEec-chhcCCcCHHHHHHHHHHHHHHHhhccchHHhhhhhhccccCC
Confidence                9999999        99999999999999999 99999     999999999999998766655554332211122


Q ss_pred             CChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCC
Q psy6272         420 LDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMD  499 (547)
Q Consensus       420 ~~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d  499 (547)
                      .+..+++|.+|+++|.+++|++||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|+++...      .+
T Consensus       393 ~~~~~~ia~aa~~~A~~l~a~aIv~~T~SG~TAr~iSk~RP~~pIia~t~~~~~~R~L~L~wGV~p~~~~~~------~~  466 (513)
T PTZ00066        393 VSVQEAVARSAVETAEDINAKLIIALTETGNTARLISKYRPSCTILALSASPSVVKSLSVARGVTTYVVNSF------QG  466 (513)
T ss_pred             CchhhHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHHhhcccCcEEEEecCC------CC
Confidence            345789999999999999999999999999999999999999999999999999999999999999987532      67


Q ss_pred             HHHHHHHHHHHHHHcCCCCCCCeEEEEecccCC-CCCCcEEEEEEee
Q psy6272         500 VDCRVQFAIQHGMEIGIISPGDPLVLINGWRKG-AGFTNIMRVVYAP  545 (547)
Q Consensus       500 ~d~~I~~a~~~~k~~g~~~~Gd~vvvv~g~~~g-~g~tntirv~~v~  545 (547)
                      .+++++.|++++++.|++++||.||+++|++.+ .|+||++||+++|
T Consensus       467 ~~~~i~~a~~~~~~~g~~~~GD~vVv~~g~~~~~~g~tn~irv~~v~  513 (513)
T PTZ00066        467 TDVVIRNAIALAKERGLVESGDSAIAVHGVKEEVAGSSNLMKVVKIP  513 (513)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCEEEEEeCCCCCCCCCCeEEEEEEcC
Confidence            899999999999999999999999999999976 7999999999987

>PLN02762 pyruvate kinase complex alpha subunit Back     alignment and domain information
>PLN02461 Probable pyruvate kinase Back     alignment and domain information
>PRK09206 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06247 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02765 pyruvate kinase Back     alignment and domain information
>cd00288 Pyruvate_Kinase Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors Back     alignment and domain information
>COG0469 PykF Pyruvate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>PRK05826 pyruvate kinase; Provisional Back     alignment and domain information
>PLN02623 pyruvate kinase Back     alignment and domain information
>KOG2323|consensus Back     alignment and domain information
>PTZ00300 pyruvate kinase; Provisional Back     alignment and domain information
>TIGR01064 pyruv_kin pyruvate kinase Back     alignment and domain information
>PF00224 PK: Pyruvate kinase, barrel domain; InterPro: IPR015793 Pyruvate kinase (2 Back     alignment and domain information
>PRK06739 pyruvate kinase; Validated Back     alignment and domain information
>PRK14725 pyruvate kinase; Provisional Back     alignment and domain information
>PRK08187 pyruvate kinase; Validated Back     alignment and domain information
>PF02887 PK_C: Pyruvate kinase, alpha/beta domain; InterPro: IPR015795 Pyruvate kinase (2 Back     alignment and domain information
>TIGR03239 GarL 2-dehydro-3-deoxyglucarate aldolase Back     alignment and domain information
>PRK10558 alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional Back     alignment and domain information
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional Back     alignment and domain information
>COG3836 HpcH 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>PF03328 HpcH_HpaI: HpcH/HpaI aldolase/citrate lyase family; InterPro: IPR005000 This family includes 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (4 Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01588 citE citrate lyase, beta subunit Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>COG2301 CitE Citrate lyase beta subunit [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>cd00727 malate_synt_A Malate synthase A (MSA), present in some bacteria, plants and fungi Back     alignment and domain information
>cd00480 malate_synt Malate synthase catalyzes the Claisen condensation of glyoxylate and acetyl-CoA to malyl-CoA , which hydrolyzes to malate and CoA Back     alignment and domain information
>TIGR01344 malate_syn_A malate synthase A Back     alignment and domain information
>PRK09255 malate synthase; Validated Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>PLN02626 malate synthase Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>TIGR02751 PEPCase_arch phosphoenolpyruvate carboxylase, archaeal type Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>PRK13655 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>COG0574 PpsA Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK00009 phosphoenolpyruvate carboxylase; Reviewed Back     alignment and domain information
>PTZ00398 phosphoenolpyruvate carboxylase; Provisional Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK02290 3-dehydroquinate synthase; Provisional Back     alignment and domain information
>PRK15452 putative protease; Provisional Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>KOG2550|consensus Back     alignment and domain information
>PRK15447 putative protease; Provisional Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>cd02809 alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes Back     alignment and domain information
>COG1751 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>PRK08883 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>PLN02826 dihydroorotate dehydrogenase Back     alignment and domain information
>PF14010 PEPcase_2: Phosphoenolpyruvate carboxylase; PDB: 3ODM_C Back     alignment and domain information
>PF01959 DHQS: 3-dehydroquinate synthase (EC 4 Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>cd04738 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) class 2 Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE) Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain Back     alignment and domain information
>cd04742 NPD_FabD 2-Nitropropane dioxygenase (NPD)-like domain, associated with the (acyl-carrier-protein) S-malonyltransferase FabD Back     alignment and domain information
>COG1465 Predicted alternative 3-dehydroquinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02320 PEP_mutase phosphoenolpyruvate phosphomutase Back     alignment and domain information
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>TIGR01036 pyrD_sub2 dihydroorotate dehydrogenase, subfamily 2 Back     alignment and domain information
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated Back     alignment and domain information
>PF03060 NMO: Nitronate monooxygenase; InterPro: IPR004136 2-Nitropropane dioxygenase (1 Back     alignment and domain information
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional Back     alignment and domain information
>PF00311 PEPcase: Phosphoenolpyruvate carboxylase; InterPro: IPR021135 Phosphoenolpyruvate carboxylase (PEPCase), an enzyme found in all multicellular plants, catalyses the formation of oxaloacetate from phosphoenolpyruvate (PEP) and a hydrocarbonate ion [] Back     alignment and domain information
>TIGR00262 trpA tryptophan synthase, alpha subunit Back     alignment and domain information
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 Back     alignment and domain information
>PLN02495 oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only] Back     alignment and domain information
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase Back     alignment and domain information
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>TIGR02814 pfaD_fam PfaD family protein Back     alignment and domain information
>PRK08745 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional Back     alignment and domain information
>cd04737 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding domain Back     alignment and domain information
>PRK13813 orotidine 5'-phosphate decarboxylase; Provisional Back     alignment and domain information
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>PF01180 DHO_dh: Dihydroorotate dehydrogenase; InterPro: IPR012135 Dihydroorotate dehydrogenase (DHOD), also known as dihydroorotate oxidase, catalyses the fourth step in de novo pyrimidine biosynthesis, the stereospecific oxidation of (S)-dihydroorotate to orotate, which is the only redox reaction in this pathway Back     alignment and domain information
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional Back     alignment and domain information
>COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>TIGR00973 leuA_bact 2-isopropylmalate synthase, bacterial type Back     alignment and domain information
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Back     alignment and domain information
>cd04741 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional Back     alignment and domain information
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid) Back     alignment and domain information
>PF01274 Malate_synthase: Malate synthase; InterPro: IPR001465 Malate synthase (2 Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>TIGR00674 dapA dihydrodipicolinate synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
4ima_A543 The Structure Of C436m-hlpyk In Complex With Citrat 6e-77
2vgg_A528 Human Erythrocyte Pyruvate Kinase: R479h Mutant Len 1e-76
4ip7_A543 Structure Of The S12d Variant Of Human Liver Pyruva 3e-76
2vgb_A528 Human Erythrocyte Pyruvate Kinase Length = 528 3e-76
2vgf_A528 Human Erythrocyte Pyruvate Kinase: T384m Mutant Len 6e-76
2vgi_A528 Human Erythrocyte Pyruvate Kinase: R486w Mutant Len 1e-75
4b2d_D548 Human Pkm2 With L-serine And Fbp Bound Length = 548 2e-75
1t5a_A567 Human Pyruvate Kinase M2 Length = 567 3e-75
3gqy_A550 Activator-Bound Structure Of Human Pyruvate Kinase 3e-75
3bjt_A530 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 3e-75
3u2z_A533 Activator-Bound Structure Of Human Pyruvate Kinase 3e-75
3srd_A551 Human M2 Pyruvate Kinase In Complex With Fructose 1 3e-75
1zjh_A548 Structure Of Human Muscle Pyruvate Kinase (Pkm2) Le 4e-75
3bjf_A518 Pyruvate Kinase M2 Is A Phosphotyrosine Binding Pro 4e-75
4g1n_A518 Pkm2 In Complex With An Activator Length = 518 4e-75
3g2g_A533 S437y Mutant Of Human Muscle Pyruvate Kinase, Isofo 2e-74
3srf_C551 Human M1 Pyruvate Kinase Length = 551 6e-74
1pkm_A530 The Refined Three-Dimensional Structure Of Cat Musc 1e-73
1aqf_A530 Pyruvate Kinase From Rabbit Muscle With Mg, K, And 6e-72
1f3w_A530 Recombinant Rabbit Muscle Pyruvate Kinase Length = 6e-72
1pkn_A530 Structure Of Rabbit Muscle Pyruvate Kinase Complexe 8e-72
1f3x_A530 S402p Mutant Of Rabbit Muscle Pyruvate Kinase Lengt 1e-71
3n25_A531 The Structure Of Muscle Pyruvate Kinase In Complex 1e-71
2g50_A530 The Location Of The Allosteric Amino Acid Binding S 1e-71
3e0v_A539 Crystal Structure Of Pyruvate Kinase From Leishmani 7e-53
3pp7_A498 Crystal Structure Of Leishmania Mexicana Pyruvate K 1e-51
1pkl_A499 The Structure Of Leishmania Pyruvate Kinase Length 1e-51
3qv9_A499 Crystal Structure Of Trypanosoma Cruzi Pyruvate Kin 1e-51
1a3w_A500 Pyruvate Kinase From Saccharomyces Cerevisiae Compl 2e-48
3eoe_A511 Crystal Structure Of Pyruvate Kinase From Toxoplasm 2e-40
3khd_A520 Crystal Structure Of Pff1300w. Length = 520 2e-40
2e28_A 587 Crystal Structure Analysis Of Pyruvate Kinase From 5e-38
3t05_A 606 Crystal Structure Of S. Aureus Pyruvate Kinase Leng 2e-34
3ma8_A534 Crystal Structure Of Cgd1_2040, A Pyruvate Kinase F 8e-33
4drs_A526 Crystal Structure Of Cryptosporidium Parvum Pyruvat 8e-33
1e0t_A470 R292d Mutant Of E. Coli Pyruvate Kinase Length = 47 2e-30
1pky_A470 Pyruvate Kinase From E. Coli In The T-State Length 3e-30
1e0u_A470 Structure R271l Mutant Of E. Coli Pyruvate Kinase L 5e-30
>pdb|4IMA|A Chain A, The Structure Of C436m-hlpyk In Complex With Citrate/mn/atp/fru-1,6-bp Length = 543 Back     alignment and structure 
Iteration: 1

 Score =  285 bits (728), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 175/523 (33%), Positives = 289/523 (55%), Gaps = 16/523 (3%)
Query: 26  NQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP 85
            Q+ AA AD +L HL  L++DS       T+I+AT+G  + SV+ +K M+++G+NI R+ 
Sbjct: 28  QQLPAAMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVERLKEMIKAGMNIARLN 87
Query: 86  -THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGD 144
            +H S  Y  E I  NV+ A+E  +         A+A++TKG ++RTG L        G 
Sbjct: 88  FSHGSHEYHAESI-ANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGIL-------QGG 139
Query: 145 NSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDRNIKLKVVEK 204
               VE+ +G+ +++T +    T+G    ++VD   + + V     +YID  +   VV+K
Sbjct: 140 PESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQK 199
Query: 205 ENNDVHCTVIR-GGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTG 263
              +   T +  GG L   + V +P    +LP ++++D   +   V   VDI+  S V  
Sbjct: 200 IGPEGLVTQVENGGVLGSRKGVNLPGAQVDLPGLSEQDVRDLRFGVEHGVDIVFASFVRK 259
Query: 264 ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTF 323
           A+ +  +R  L      + I++KIE   G++  DEI+  SDG+++ R  L +    E  F
Sbjct: 260 ASDVAAVRAALGPEGHGIKIISKIENHEGVKRFDEILEVSDGIMVARGDLGIEIPAEKVF 319
Query: 324 LAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT-QS 382
           LAQKM+  RCN  GKP +    +L   ++   +  +  + +DV + V DGAD ++L+ ++
Sbjct: 320 LAQKMMIGRCNLAGKPVVCATQML--ESMITKARPTRAETSDVANAVLDGADCIMLSGET 377
Query: 383 EQAHHRVDILK---EILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQA 439
            + +  V+ +K    I ++ E+ ++ +Q+FE+L   A    DP     I  V AA KC A
Sbjct: 378 AKGNFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEAAFKCMA 437
Query: 440 VAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMD 499
            AIIV+T +G SA+L+S+YRP+  ++AV+      R +++ R + PL Y   P+A W+ D
Sbjct: 438 AAIIVLTTTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLCRGVFPLLYREPPEAIWADD 497
Query: 500 VDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVV 542
           VD RVQF I+ G   G +  GD ++++ GWR G+G+TNIMRV+
Sbjct: 498 VDRRVQFGIESGKLRGFLRVGDLVIVVTGWRPGSGYTNIMRVL 540
>pdb|2VGG|A Chain A, Human Erythrocyte Pyruvate Kinase: R479h Mutant Length = 528 Back     alignment and structure
>pdb|4IP7|A Chain A, Structure Of The S12d Variant Of Human Liver Pyruvate Kinase In Complex With Citrate And Fbp. Length = 543 Back     alignment and structure
>pdb|2VGB|A Chain A, Human Erythrocyte Pyruvate Kinase Length = 528 Back     alignment and structure
>pdb|2VGF|A Chain A, Human Erythrocyte Pyruvate Kinase: T384m Mutant Length = 528 Back     alignment and structure
>pdb|2VGI|A Chain A, Human Erythrocyte Pyruvate Kinase: R486w Mutant Length = 528 Back     alignment and structure
>pdb|4B2D|D Chain D, Human Pkm2 With L-serine And Fbp Bound Length = 548 Back     alignment and structure
>pdb|1T5A|A Chain A, Human Pyruvate Kinase M2 Length = 567 Back     alignment and structure
>pdb|3GQY|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 550 Back     alignment and structure
>pdb|3BJT|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 530 Back     alignment and structure
>pdb|3U2Z|A Chain A, Activator-Bound Structure Of Human Pyruvate Kinase M2 Length = 533 Back     alignment and structure
>pdb|3SRD|A Chain A, Human M2 Pyruvate Kinase In Complex With Fructose 1-6 Bisphosphate And Oxalate. Length = 551 Back     alignment and structure
>pdb|1ZJH|A Chain A, Structure Of Human Muscle Pyruvate Kinase (Pkm2) Length = 548 Back     alignment and structure
>pdb|3BJF|A Chain A, Pyruvate Kinase M2 Is A Phosphotyrosine Binding Protein Length = 518 Back     alignment and structure
>pdb|4G1N|A Chain A, Pkm2 In Complex With An Activator Length = 518 Back     alignment and structure
>pdb|3G2G|A Chain A, S437y Mutant Of Human Muscle Pyruvate Kinase, Isoform M2 Length = 533 Back     alignment and structure
>pdb|3SRF|C Chain C, Human M1 Pyruvate Kinase Length = 551 Back     alignment and structure
>pdb|1PKM|A Chain A, The Refined Three-Dimensional Structure Of Cat Muscle (M1) Pyruvate Kinase, At A Resolution Of 2.6 Angstroms Length = 530 Back     alignment and structure
>pdb|1AQF|A Chain A, Pyruvate Kinase From Rabbit Muscle With Mg, K, And L- Phospholactate Length = 530 Back     alignment and structure
>pdb|1F3W|A Chain A, Recombinant Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|1PKN|A Chain A, Structure Of Rabbit Muscle Pyruvate Kinase Complexed With Mn2+, K+, And Pyruvate Length = 530 Back     alignment and structure
>pdb|1F3X|A Chain A, S402p Mutant Of Rabbit Muscle Pyruvate Kinase Length = 530 Back     alignment and structure
>pdb|3N25|A Chain A, The Structure Of Muscle Pyruvate Kinase In Complex With Proline, Pyruvate, And Mn2+ Length = 531 Back     alignment and structure
>pdb|2G50|A Chain A, The Location Of The Allosteric Amino Acid Binding Site Of Muscle Pyruvate Kinase. Length = 530 Back     alignment and structure
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania Mexicana In Complex With Sulphate Ions Length = 539 Back     alignment and structure
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase In Complex With The Drug Suramin, An Inhibitor Of Glycolysis. Length = 498 Back     alignment and structure
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase Length = 499 Back     alignment and structure
>pdb|3QV9|A Chain A, Crystal Structure Of Trypanosoma Cruzi Pyruvate Kinase(Tcpyk)in Complex With Ponceau S. Length = 499 Back     alignment and structure
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed With Fbp, Pg, Mn2+ And K+ Length = 500 Back     alignment and structure
>pdb|3EOE|A Chain A, Crystal Structure Of Pyruvate Kinase From Toxoplasma Gondii, 55.M00007 Length = 511 Back     alignment and structure
>pdb|3KHD|A Chain A, Crystal Structure Of Pff1300w. Length = 520 Back     alignment and structure
>pdb|2E28|A Chain A, Crystal Structure Analysis Of Pyruvate Kinase From Bacillus Stearothermophilus Length = 587 Back     alignment and structure
>pdb|3T05|A Chain A, Crystal Structure Of S. Aureus Pyruvate Kinase Length = 606 Back     alignment and structure
>pdb|3MA8|A Chain A, Crystal Structure Of Cgd1_2040, A Pyruvate Kinase From Cryptosporidium Parvum Length = 534 Back     alignment and structure
>pdb|4DRS|A Chain A, Crystal Structure Of Cryptosporidium Parvum Pyruvate Kinase Length = 526 Back     alignment and structure
>pdb|1E0T|A Chain A, R292d Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure
>pdb|1PKY|A Chain A, Pyruvate Kinase From E. Coli In The T-State Length = 470 Back     alignment and structure
>pdb|1E0U|A Chain A, Structure R271l Mutant Of E. Coli Pyruvate Kinase Length = 470 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 1e-121
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 1e-107
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 1e-103
3ma8_A534 Pyruvate kinase; parasitology, pyruvate kiase, gly 6e-93
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 4e-91
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 5e-91
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 3e-90
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 1e-85
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 1e-77
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 1e-54
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 1zjh_A 3g2g_A 1t5a_A* 3bjt_A 3bjf_A* 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* 1aqf_A* 1pkm_A 2g50_A* 1pkn_A 2vgb_A* 2vgf_A* 2vgg_A* ... Length = 550 Back     alignment and structure
 Score =  366 bits (942), Expect = e-121
 Identities = 179/545 (32%), Positives = 287/545 (52%), Gaps = 30/545 (5%)

Query: 14  PWRKPDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKL 73
           P  +         Q++AA AD +L H+ +L++DSP      T I+ T+G  + SV+ +K 
Sbjct: 23  PHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKE 82

Query: 74  MLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTG 132
           M++SG+N+ R+  +H +  Y  E I KNV+ A E  + +       AVA++TKG ++RTG
Sbjct: 83  MIKSGMNVARLNFSHGTHEYHAETI-KNVRTATESFASDPILYRPVAVALDTKGPEIRTG 141

Query: 133 KLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVY 192
            +        G  +  VE+ +GA + +T +     K     L++D   + K V     +Y
Sbjct: 142 LIK-------GSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIY 194

Query: 193 I-DRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVRE 251
           + D  I L+V +K  + +   V  GG L   + V +P    +LP ++++D   +   V +
Sbjct: 195 VDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQ 254

Query: 252 AVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRI 311
            VD++  S +  A+ + E+R +L +    + I++KIE   G+   DEI+  SDG+++ R 
Sbjct: 255 DVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARG 314

Query: 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDIL------PDHNVEEYSDVSIGDMND 365
            L +    E  FLAQKM+  RCN+ GKP +    +L      P     E SDV+      
Sbjct: 315 DLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVA------ 368

Query: 366 VNSIVQDGADVVVLTQSEQAHHR-----VDILKEILKKTESVLWEKQVFEDLCALACPPL 420
            N+++ DGAD ++L+  E A        V +   I ++ E+ ++  Q+FE+L  LA    
Sbjct: 369 -NAVL-DGADCIMLS-GETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITS 425

Query: 421 DPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVY 480
           DP  +  +  V A+ KC + AIIV+T SG SA  V++YRP+ PI+AV+      R  ++Y
Sbjct: 426 DPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLY 485

Query: 481 RNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMR 540
           R I P+      Q  W+ DVD RV FA+  G   G    GD ++++ GWR G+GFTN MR
Sbjct: 486 RGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMR 545

Query: 541 VVYAP 545
           VV  P
Sbjct: 546 VVPVP 550
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Length = 500 Back     alignment and structure
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Length = 499 Back     alignment and structure
>3ma8_A Pyruvate kinase; parasitology, pyruvate kiase, glycol kinase, magnesium, transferase, structural genomi structural genomics consortium; HET: CIT; 2.64A {Cryptosporidium parvum} Length = 534 Back     alignment and structure
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Length = 520 Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Length = 511 Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Length = 470 Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* Length = 606 Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Length = 587 Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Length = 461 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
3gr4_A550 Pyruvate kinase isozymes M1/M2; activator, acetyla 100.0
3hqn_D499 Pyruvate kinase, PK; TIM barrel, T-state enzyme, t 100.0
4drs_A526 Pyruvate kinase; glycolysis, allosteric EN transfe 100.0
3khd_A520 Pyruvate kinase; malaria, structural genomics, str 100.0
3gg8_A511 Pyruvate kinase; malaria, genomics, proteomics, gl 100.0
3t05_A 606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 100.0
1e0t_A470 Pyruvate kinase, PK; phosphotransferase, glycolysi 100.0
1a3w_A500 Pyruvate kinase; allosteric regulation, tranferase 100.0
2e28_A 587 Pyruvate kinase, PK; allosteric, transferase; 2.40 100.0
3qtg_A461 Pyruvate kinase, PK; TIM barrel, glycolysis, trans 100.0
1izc_A339 Macrophomate synthase intermolecular diels-aldera; 99.78
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 99.73
2vws_A267 YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escher 99.72
3qz6_A261 HPCH/HPAI aldolase; structural genomics, PSI-biolo 99.72
1dxe_A256 2-dehydro-3-deoxy-galactarate aldolase; class II a 99.69
1sgj_A284 Citrate lyase, beta subunit; trimer, TIM barrel, s 99.58
2xz9_A324 Phosphoenolpyruvate-protein kinase (PTS system EI 99.4
3qll_A316 Citrate lyase; beta barrel; 2.45A {Yersinia pestis 99.2
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 99.2
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 99.17
1u5h_A273 CITE; TIM barrel, structural genomics, PSI, protei 99.15
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 99.14
3qqw_A332 Putative citrate lyase; TIM beta/alpha-barrel, str 99.13
3r4i_A339 Citrate lyase; TIM beta/alpha-barrel, structural g 99.1
3oyz_A433 Malate synthase; TIM barrel, transferase; HET: ACO 98.74
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 98.52
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 98.38
3cuz_A532 MSA, malate synthase A; TIM barrel, cytoplasm, gly 98.02
3cux_A528 Malate synthase; TIM barrel, glyoxylate bypass, tr 97.9
1p7t_A731 MSG, malate synthase G; TIM barrel, glyoxylate cyc 97.61
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 97.57
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 96.71
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 96.57
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 95.94
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 95.42
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 95.32
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 95.24
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 95.03
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 94.95
1jqo_A 970 Phosphoenolpyruvate carboxylase; beta barrel, carb 94.94
1vp8_A201 Hypothetical protein AF0103; putative pyruvate kin 94.65
3odm_A560 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 94.59
1t57_A206 Conserved protein MTH1675; structural genomics, FM 94.44
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 94.25
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 94.06
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 93.82
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 93.78
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 93.36
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 93.16
1jqn_A 883 Pepcase, PEPC, phosphoenolpyruvate carboxylase; be 92.87
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 92.76
3i65_A415 Dihydroorotate dehydrogenase homolog, mitochondria 92.7
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 92.54
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 92.28
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 92.2
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 92.12
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 92.12
3zwt_A367 Dihydroorotate dehydrogenase (quinone), mitochond; 91.75
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 91.72
3ovp_A228 Ribulose-phosphate 3-epimerase; iron binding, isom 91.22
1me8_A503 Inosine-5'-monophosphate dehydrogenase; alpha beta 91.16
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 90.57
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 90.45
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 90.44
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 90.4
1zfj_A491 Inosine monophosphate dehydrogenase; IMPDH, CBS do 89.95
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 89.94
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 89.69
1vhc_A224 Putative KHG/KDPG aldolase; structural genomics, u 89.1
1tv5_A443 Dhodehase, dihydroorotate dehydrogenase homolog, m 88.93
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 88.87
2qr6_A393 IMP dehydrogenase/GMP reductase; NP_599840.1, G re 88.48
1tqj_A230 Ribulose-phosphate 3-epimerase; beta-alpha barrel 88.12
4g9p_A406 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; 87.87
1geq_A248 Tryptophan synthase alpha-subunit; hyperthermophIl 87.85
3ble_A337 Citramalate synthase from leptospira interrogans; 87.46
2e6f_A314 Dihydroorotate dehydrogenase; chagas disease, pyri 87.25
1wbh_A214 KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} 86.89
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 86.82
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 86.59
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 86.5
1ep3_A311 Dihydroorotate dehydrogenase B (PYRD subunit); het 86.34
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 85.83
3vnd_A267 TSA, tryptophan synthase alpha chain; psychrophili 85.83
4ef8_A354 Dihydroorotate dehydrogenase; phenyl isothiocyanat 85.82
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 85.71
3nav_A271 Tryptophan synthase alpha chain; alpha subunit, st 85.57
2fli_A220 Ribulose-phosphate 3-epimerase; (beta/alpha)8-barr 85.49
3cu2_A237 Ribulose-5-phosphate 3-epimerase; YP_718263.1, rib 85.27
2yw3_A207 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deox 84.67
3tha_A252 Tryptophan synthase alpha chain; structural genomi 84.3
1p0k_A349 Isopentenyl-diphosphate delta-isomerase; terpene b 84.26
1h5y_A253 HISF; histidine biosynthesis, TIM-barrel; 2.0A {Py 84.13
1ka9_F252 Imidazole glycerol phosphtate synthase; riken stru 83.49
4e38_A232 Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho 83.43
1thf_D253 HISF protein; thermophIle, TIM-barrel, histidine b 83.32
1rpx_A230 Protein (ribulose-phosphate 3-epimerase); chloropl 83.26
1yxy_A234 Putative N-acetylmannosamine-6-phosphate 2-epimer; 82.82
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 82.54
3daq_A292 DHDPS, dihydrodipicolinate synthase; lysine biosyn 82.19
1mxs_A225 KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate a 81.91
3rmj_A370 2-isopropylmalate synthase; LEUA, truncation, neis 81.9
1vzw_A244 Phosphoribosyl isomerase A; histidine biosynthesis 81.66
2cu0_A486 Inosine-5'-monophosphate dehydrogenase; structural 81.62
1xi3_A215 Thiamine phosphate pyrophosphorylase; structural g 81.3
2ekc_A262 AQ_1548, tryptophan synthase alpha chain; structur 81.19
3fkr_A309 L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL f 81.03
3tsm_A272 IGPS, indole-3-glycerol phosphate synthase; struct 81.02
2y88_A244 Phosphoribosyl isomerase A; aromatic amino acid bi 80.92
3b4u_A294 Dihydrodipicolinate synthase; structural genomics, 80.59
2v82_A212 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l 80.36
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ... Back     alignment and structure
Probab=100.00  E-value=3e-139  Score=1134.45  Aligned_cols=519  Identities=34%  Similarity=0.546  Sum_probs=487.3

Q ss_pred             eeeCCCCC-----CCCCCCccccchhhhhhhHHHhhhhcCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEee
Q psy6272          10 VVLLPWRK-----PDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRI   84 (547)
Q Consensus        10 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~h~~~l~i~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~Ri   84 (547)
                      .|-+||++     ....|.+.||+.+++|+|+|+|+|.|+++++|..+|+|||||||||||+++|+|++|+++|||||||
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~Rl   93 (550)
T 3gr4_A           14 LVPRGSMSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARL   93 (550)
T ss_dssp             ------------------CCSTTHHHHTCSSHHHHHHTCCTTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEE
T ss_pred             cccccccccccccccccccchhhhcccccccHHHHhhccCCCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEE
Confidence            34455654     3568999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cCCCHHHHHHHHHHHHHHHHHHhccccccceeeEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeecc
Q psy6272          85 P-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQ  163 (547)
Q Consensus        85 N-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~  163 (547)
                      | |||++|+|.+ +|+++|+++++++.+.++++|++|++||+|||||||.+.       ++...+++|++||+|+||++.
T Consensus        94 NfSHG~~e~h~~-~i~~iR~a~~~~~~~~~~~~~vaIllDlkGPkIR~G~~~-------~~~~~~v~L~~G~~~~lt~~~  165 (550)
T 3gr4_A           94 NFSHGTHEYHAE-TIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIK-------GSGTAEVELKKGATLKITLDN  165 (550)
T ss_dssp             ETTSSCHHHHHH-HHHHHHHHHHTTTTCTTTCCCCEEEEECCCSCCBBCCBT-------TBTTCCEEECTTCEEEEECCG
T ss_pred             ECCCCCHHHHHH-HHHHHHHHHHhhccccccCceEEEEEeCCCCEEEEEecC-------CCCCCCeEEcCCCEEEEEeCC
Confidence            9 9999999999 999999999997777667899999999999999999997       433347999999999999998


Q ss_pred             ccccCCCccEEEecCCCcccccCCCCEEEEec-eeEEEEEEEeCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhH
Q psy6272         164 LIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-NIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDK  242 (547)
Q Consensus       164 ~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~I~l~V~~v~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~  242 (547)
                      .+...|+.+.|+|||++|+++|++||+||||| +|.|+|.+++++.+.|+|++||.|+++||||+||+.+++|+||++|+
T Consensus       166 ~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~  245 (550)
T 3gr4_A          166 AYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDI  245 (550)
T ss_dssp             GGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHH
T ss_pred             cccCCCCccEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHH
Confidence            77677899999999999999999999999999 99999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHH
Q psy6272         243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVT  322 (547)
Q Consensus       243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v  322 (547)
                      +||+|++++|+|+|++|||++++|++++|++|++.|.++.|||||||++|++|||||++++|||||||||||+|+|+++|
T Consensus       246 ~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v  325 (550)
T 3gr4_A          246 QDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKV  325 (550)
T ss_dssp             HHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGH
T ss_pred             HHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCcEEEEcCCCC------CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHH
Q psy6272         323 FLAQKMIAARCNKQGKPFLVVGDILP------DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDI  391 (547)
Q Consensus       323 ~~~qk~ii~~c~~~gKPvi~aTq~Le------~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~  391 (547)
                      +.+||+|+++||++|||||+||||||      +|||||+        +||||||+||+||+||| ||||.     |||++
T Consensus       326 p~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEv--------sDVanAvldG~DavMLS-gETA~G~yPveaV~~  396 (550)
T 3gr4_A          326 FLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEG--------SDVANAVLDGADCIMLS-GETAKGDYPLEAVRM  396 (550)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHH--------HHHHHHHHHTCSEEEES-HHHHTCSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHH--------HHHHHHHHcCCcEEEEe-cCccCCCCHHHHHHH
Confidence            99999999999999999999999999      9999999        99999999999999999 99998     99999


Q ss_pred             HHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCch
Q psy6272         392 LKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLG  471 (547)
Q Consensus       392 m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~  471 (547)
                      |++||+++|++.+|+++|..+....+.+.+..++||.+|+++|++++|+|||+||.||+||+++|||||+|||||+|+++
T Consensus       397 M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~  476 (550)
T 3gr4_A          397 QHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNP  476 (550)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCH
T ss_pred             HHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCH
Confidence            99999999999988888877655455667899999999999999999999999999999999999999999999999999


Q ss_pred             hccccccccccceEEeecCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCeEEEEecccCCCCCCcEEEEEEee
Q psy6272         472 YVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAP  545 (547)
Q Consensus       472 ~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~~~k~~g~~~~Gd~vvvv~g~~~g~g~tntirv~~v~  545 (547)
                      +++|||+|+|||+|+++.....++|.++.|.++++|+++++++|++++||.||+++||+.|+|+||+|||++||
T Consensus       477 ~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv~~v~  550 (550)
T 3gr4_A          477 QTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP  550 (550)
T ss_dssp             HHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSCCTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred             HHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence            99999999999999999877677898999999999999999999999999999999999999999999999986
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A* Back     alignment and structure
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A* Back     alignment and structure
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A Back     alignment and structure
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum} Back     alignment and structure
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5 Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A Back     alignment and structure
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0 Back     alignment and structure
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A Back     alignment and structure
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5 Back     alignment and structure
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A* Back     alignment and structure
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis} Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha} Back     alignment and structure
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans} Back     alignment and structure
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A* Back     alignment and structure
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3 Back     alignment and structure
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2 Back     alignment and structure
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens} Back     alignment and structure
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2 Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A Back     alignment and structure
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A* Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1 Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1 Back     alignment and structure
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1 Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2 Back     alignment and structure
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A* Back     alignment and structure
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A* Back     alignment and structure
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A* Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A* Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina} Back     alignment and structure
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A* Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4 Back     alignment and structure
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 Back     alignment and structure
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus} Back     alignment and structure
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A Back     alignment and structure
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni} Back     alignment and structure
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A* Back     alignment and structure
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1 Back     alignment and structure
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1 Back     alignment and structure
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3} Back     alignment and structure
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A Back     alignment and structure
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2 Back     alignment and structure
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5 Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A Back     alignment and structure
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1 Back     alignment and structure
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis} Back     alignment and structure
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A Back     alignment and structure
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1 Back     alignment and structure
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1 Back     alignment and structure
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus} Back     alignment and structure
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A Back     alignment and structure
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0 Back     alignment and structure
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A* Back     alignment and structure
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str} Back     alignment and structure
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 547
d1a3xa3134 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal d 8e-33
d2vgba3134 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal d 3e-32
d2g50a3135 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal d 9e-31
d1pkla3141 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal d 1e-29
d1e0ta3117 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal d 2e-22
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 1e-19
d2g50a2282 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-t 5e-10
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 3e-19
d1pkla2258 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-ter 2e-06
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 4e-17
d1e0ta2246 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-ter 2e-04
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 6e-17
d1a3xa2265 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-ter 8e-05
d2g50a1102 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit 1e-13
d2vgba1102 b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human ( 5e-13
d1a3xa1101 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's 2e-11
d1pkla199 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishman 4e-11
d1e0ta198 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escheric 1e-09
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: PK C-terminal domain-like
family: Pyruvate kinase, C-terminal domain
domain: Pyruvate kinase, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  120 bits (301), Expect = 8e-33
 Identities = 47/132 (35%), Positives = 75/132 (56%)

Query: 411 DLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSL 470
           D+      P     ++  + V A  + +A AIIV++ SG + +LVSKYRP CPI+ V+  
Sbjct: 1   DMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRC 60

Query: 471 GYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWR 530
               R  ++YR + P  + + P +DW+ DV+ R+ F I+   E GI+  GD  V I G++
Sbjct: 61  PRAARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSIQGFK 120

Query: 531 KGAGFTNIMRVV 542
            GAG +N ++V 
Sbjct: 121 AGAGHSNTLQVS 132
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 135 Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 141 Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 282 Back     information, alignment and structure
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Length = 258 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 246 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 265 Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 102 Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 101 Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Length = 99 Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Length = 98 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 100.0
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 100.0
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 100.0
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 100.0
d2vgba3134 Pyruvate kinase, C-terminal domain {Human (Homo sa 100.0
d2g50a3135 Pyruvate kinase, C-terminal domain {Rabbit (Orycto 100.0
d1a3xa3134 Pyruvate kinase, C-terminal domain {Baker's yeast 100.0
d1pkla3141 Pyruvate kinase, C-terminal domain {Leishmania mex 100.0
d1e0ta3117 Pyruvate kinase, C-terminal domain {Escherichia co 99.98
d2vgba1102 Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 99.89
d2g50a1102 Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculu 99.89
d1a3xa1101 Pyruvate kinase (PK) {Baker's yeast (Saccharomyces 99.87
d1e0ta198 Pyruvate kinase (PK) {Escherichia coli [TaxId: 562 99.86
d1pkla199 Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 99.86
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 99.77
d1izca_299 Macrophomate synthase {Macrophoma commelinae [TaxI 99.72
d1sgja_231 Citrate lyase, beta subunit {Deinococcus radiodura 98.75
d1u5ha_223 Citrate lyase, beta subunit {Mycobacterium tubercu 98.56
d1kbla1364 Pyruvate phosphate dikinase, C-terminal domain {Cl 97.67
d1vbga1356 Pyruvate phosphate dikinase, C-terminal domain {Ma 97.6
d1h6za1366 Pyruvate phosphate dikinase, C-terminal domain {Tr 97.1
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 96.53
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 96.41
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 96.27
d1jr1a1378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 96.16
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 95.58
d2cu0a1368 Inosine monophosphate dehydrogenase (IMPDH) {Pyroc 95.11
d1t57a_186 Hypothetical protein MTH1675 {Methanobacterium the 94.6
d1pvna1362 Inosine monophosphate dehydrogenase (IMPDH) {Tritr 93.14
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 93.08
d1vp8a_190 Hypothetical protein AF0103 {Archaeoglobus fulgidu 92.51
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 90.9
d1tv5a1409 Dihydroorotate dehydrogenase {Plasmodium falciparu 90.08
d1geqa_248 Trp synthase alpha-subunit {Archaeon Pyrococcus fu 89.49
d1f76a_336 Dihydroorotate dehydrogenase {Escherichia coli [Ta 89.15
d1d3ga_367 Dihydroorotate dehydrogenase {Human (Homo sapiens) 88.58
d1jqna_ 880 Phosphoenolpyruvate carboxylase {Escherichia coli 86.91
d1jqoa_ 936 Phosphoenolpyruvate carboxylase {Escherichia coli 85.91
d1qopa_267 Trp synthase alpha-subunit {Salmonella typhimurium 84.48
d2b4ga1312 Dihydroorotate dehydrogenase {Trypanosoma brucei [ 84.3
d1juba_311 Dihydroorotate dehydrogenase {Lactococcus lactis, 83.33
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Phosphoenolpyruvate/pyruvate domain
family: Pyruvate kinase
domain: Pyruvate kinase, N-terminal domain
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.6e-72  Score=567.41  Aligned_cols=269  Identities=32%  Similarity=0.531  Sum_probs=248.3

Q ss_pred             ccccchhhhhhhHHHhhhhcCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHH
Q psy6272          24 PVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVK  102 (547)
Q Consensus        24 ~~~~~~~~~~~~~l~h~~~l~i~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir  102 (547)
                      +.+|++|++|+|+|+|+|+|+|.++|.+.|+|||||||||||+++++|++|+++|||||||| |||++++|.+ +++++|
T Consensus         2 ~~~q~~~~~~~~~l~~~~~~~i~~~p~~~RkTKIIaTiGPas~~~e~l~~Li~aGvnv~RiN~SHg~~e~h~~-~i~~iR   80 (282)
T d2g50a2           2 QTQQLHAAMADTFLEHKCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAE-TIKNVR   80 (282)
T ss_dssp             CSTTHHHHTCSSHHHHHHTCCTTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHH-HHHHHH
T ss_pred             chhhhhhhhhhhHHHHHHhcCcCCCCcccCCCcEEEEeCCCCCCHHHHHHHHHcCCCEEEEeCCCCCHHHHHH-HHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999 9999999999 999999


Q ss_pred             HHHHHhccccccceeeEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcc
Q psy6272         103 LAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELP  182 (547)
Q Consensus       103 ~a~~~~~~~~~~~~~i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~  182 (547)
                      ++.+++..+..+.++++                                                               
T Consensus        81 ~~~~~~~~~~il~~~~~---------------------------------------------------------------   97 (282)
T d2g50a2          81 TATESFASDPILYRPVA---------------------------------------------------------------   97 (282)
T ss_dssp             HHHHTTTTCTTTCCCCE---------------------------------------------------------------
T ss_pred             HHHHHhCCCceeccccc---------------------------------------------------------------
Confidence            99887632111111111                                                               


Q ss_pred             cccCCCCEEEEeceeEEEEEEEeCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEEEEcccC
Q psy6272         183 KRVIPDDIVYIDRNIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVT  262 (547)
Q Consensus       183 ~~v~~Gd~I~idD~I~l~V~~v~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I~~sfV~  262 (547)
                              |..|                                     ...|.++++|++||++|+++|+|+|++|||+
T Consensus        98 --------I~~d-------------------------------------~~~~~l~~~di~di~~a~~~~vD~ialSFVr  132 (282)
T d2g50a2          98 --------VALD-------------------------------------TKGPAVSEKDIQDLKFGVEQDVDMVFASFIR  132 (282)
T ss_dssp             --------EEEE-------------------------------------CCCCSSCHHHHHHHHHHHHTTCSEEEETTCC
T ss_pred             --------cccc-------------------------------------cccccccchHHHHHHHhhhccccceeecccC
Confidence                    1111                                     1237788999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272         263 GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV  342 (547)
Q Consensus       263 sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~  342 (547)
                      +++|+.++|+++.+.|.+++||||||+.+|++|+|||+..+|||||+|||||+|+|+++++.+||.|++.|+.+||||++
T Consensus       133 s~~DI~~~r~~l~~~g~~~~IiaKIE~~~al~NldeIi~~sDgIMIaRGDLg~ei~~e~vp~~Qk~Ii~~~~~~~kpviv  212 (282)
T d2g50a2         133 KAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVIC  212 (282)
T ss_dssp             SHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEeecchhhhhcchhhccccceeeeeccccccccCHHHhHHHHHHHHHHHHhcCCcEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCC------CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHH
Q psy6272         343 VGDILP------DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFE  410 (547)
Q Consensus       343 aTq~Le------~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~  410 (547)
                      ||||||      .|||||+        +|++|||.+|+||+||| +|||.     +||++|++||+++|++++|+.+|+
T Consensus       213 At~~leSMi~~~~pTRaEv--------~Dianav~~G~D~imLs-~ETa~G~~p~~~V~~l~~i~~~~E~~~~~~~~~~  282 (282)
T d2g50a2         213 ATQMLESMIKKPRPTRAEG--------SDVANAVLDGADCIMLS-GETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFE  282 (282)
T ss_dssp             ESSTTGGGGTCSSCCHHHH--------HHHHHHHHHTCSEEEES-HHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             ecccccccccCCCCCHHHH--------HHHHHHHHhCCCEEEEC-cccccCCCHHHHHHHHHHHHHHHHhchhhHhhcC
Confidence            999999      9999999        99999999999999999 99999     999999999999999999988874
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pkla3 c.49.1.1 (A:358-498) Pyruvate kinase, C-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1e0ta3 c.49.1.1 (A:354-470) Pyruvate kinase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1a3xa1 b.58.1.1 (A:88-188) Pyruvate kinase (PK) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pkla1 b.58.1.1 (A:88-186) Pyruvate kinase (PK) {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]} Back     information, alignment and structure
>d1sgja_ c.1.12.5 (A:) Citrate lyase, beta subunit {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u5ha_ c.1.12.5 (A:) Citrate lyase, beta subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1kbla1 c.1.12.2 (A:510-873) Pyruvate phosphate dikinase, C-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1vbga1 c.1.12.2 (A:521-876) Pyruvate phosphate dikinase, C-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1h6za1 c.1.12.2 (A:538-903) Pyruvate phosphate dikinase, C-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1f76a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jqna_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jqoa_ c.1.12.3 (A:) Phosphoenolpyruvate carboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2b4ga1 c.1.4.1 (A:2-313) Dihydroorotate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1juba_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme A [TaxId: 1358]} Back     information, alignment and structure