Psyllid ID: psy6368

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
AVKLESVHPDRTRYLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLESRRPPSPDSLRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRDETEKIIRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALEANAHPHDGAPPQPSLLSQQIASTVTSMDKKSPPRPRQPISTNTTGRSINP
cccccccccccEEEEEEEEEcccccEEEEEccccccccEEEEEEEEEcccEEEEcccccEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccEEEccccccEEEEEEEEccccccEEEEEEEEcccccEEEEEEEEEcccEEEEcccccEEEEccccEEEEcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHccccEEEEEEEEHcccccccEEEEEEEEEccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHEccccccccccccccccccccccccccccccccccccccccccccccccEEcccc
avklesvhpdrtrYLVVVSCdeqgdescllgidcnqttTVGLVLRVLADtsitldgdggfsvcvcgrqhifkpVSVQAMWSALQSLHKVSsvardknyflnggshewVSHYEAKIASDRSCLNEWHAMdslesrrppspdslrdkVCHILNVTREidnffpgifdycnirvydddktdLLKHWDNTYKYitsakpsqrdeTEKIIRSTLKEIIMSVDLDEVTSKYIRSRLEdimdsdlgeyKSFIDQLEFRNLLIEGGVKSRVYALEanahphdgappqpsllsqQIASTVTsmdkkspprprqpistnttgrsinp
avklesvhpdrtryLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLesrrppspdslRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKyitsakpsqrdetEKIIRSTLKeiimsvdldevtSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALEANAHPHDGAPPQPSLLSQQIASTVtsmdkkspprprqpistnttgrsinp
AVKLESVHPDRTRYLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLESRRPPSPDSLRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRDETEKIIRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALEANAHPHDGAPPQPSLLSQQIASTVTSMDKKSPPRPRQPISTNTTGRSINP
***********TRYLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWH*****************DKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITS**********KIIRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALE**************************************************
AVK***VHPDRTRYLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLE**************CHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWD********************IRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALEANAH**********************************************
AVKLESVHPDRTRYLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDS***********LRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSA********EKIIRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALEANAHPHDGAPPQPSLLSQQIA*****************************
*VKLESVHPDRTRYLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLESRRPPSPDSLRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRDETEKIIRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALEAN************************************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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AVKLESVHPDRTRYLVVVSCDEQGDESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLESRRPPSPDSLRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRDETEKIIRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFIDQLEFRNLLIEGGVKSRVYALEANAHPHDGAPPQPSLLSQQIASTVTSMDKKSPPRPRQPISTNTTGRSINP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query317 2.2.26 [Sep-21-2011]
Q6NN85 1045 Protein phosphatase Sling yes N/A 0.545 0.165 0.549 1e-64
Q76I79 1042 Protein phosphatase Sling yes N/A 0.646 0.196 0.433 1e-48
Q8WYL5 1049 Protein phosphatase Sling yes N/A 0.646 0.195 0.429 8e-48
Q76I76 1423 Protein phosphatase Sling no N/A 0.621 0.138 0.436 5e-45
Q5SW75 1423 Protein phosphatase Sling no N/A 0.621 0.138 0.436 1e-44
Q5XIS1 652 Protein phosphatase Sling no N/A 0.668 0.325 0.351 3e-36
Q8K330 649 Protein phosphatase Sling no N/A 0.668 0.326 0.349 4e-36
Q8TE77 659 Protein phosphatase Sling no N/A 0.615 0.295 0.358 6e-35
Q6IVY4 691 Protein phosphatase Sling N/A N/A 0.593 0.272 0.307 3e-19
>sp|Q6NN85|SSH_DROME Protein phosphatase Slingshot OS=Drosophila melanogaster GN=ssh PE=1 SV=2 Back     alignment and function desciption
 Score =  246 bits (628), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 122/222 (54%), Positives = 151/222 (68%), Gaps = 49/222 (22%)

Query: 25  DESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQ 84
           +ESCLLGIDCN+ TT+GLV+ +LADT+I LDGDGGFSV V  + HIFKPVSVQAMWSALQ
Sbjct: 199 EESCLLGIDCNERTTIGLVVPILADTTIHLDGDGGFSVKVYEKTHIFKPVSVQAMWSALQ 258

Query: 85  SLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLESRRPPSPDSLRD 144
           +LHKVS  AR+ N++ +G SH+W+S YE +I SD+SCLNEW+AMD+LESRRPPSPD++R+
Sbjct: 259 TLHKVSKKARENNFYASGPSHDWLSSYERRIESDQSCLNEWNAMDALESRRPPSPDAIRN 318

Query: 145 KVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRDETEKI 204
                                                            KP +++ETE +
Sbjct: 319 -------------------------------------------------KPPEKEETESV 329

Query: 205 IRSTLKEIIMSVDLDEVTSKYIRSRLEDIMDSDLGEYKSFID 246
           I+  LK I+MSVDLDEVTSKYIR RLE+I+D DLGEYKSFID
Sbjct: 330 IKMKLKAIMMSVDLDEVTSKYIRGRLEEILDMDLGEYKSFID 371
Protein phosphatase which regulates actin filament dynamics. Dephosphorylates and activates the actin binding/depolymerizing factor tsr/cofilin, which subsequently binds to actin filaments and stimulates their disassembly.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8
>sp|Q76I79|SSH1_MOUSE Protein phosphatase Slingshot homolog 1 OS=Mus musculus GN=Ssh1 PE=1 SV=1 Back     alignment and function description
>sp|Q8WYL5|SSH1_HUMAN Protein phosphatase Slingshot homolog 1 OS=Homo sapiens GN=SSH1 PE=1 SV=2 Back     alignment and function description
>sp|Q76I76|SSH2_HUMAN Protein phosphatase Slingshot homolog 2 OS=Homo sapiens GN=SSH2 PE=1 SV=1 Back     alignment and function description
>sp|Q5SW75|SSH2_MOUSE Protein phosphatase Slingshot homolog 2 OS=Mus musculus GN=Ssh2 PE=1 SV=2 Back     alignment and function description
>sp|Q5XIS1|SSH3_RAT Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus GN=Ssh3 PE=2 SV=1 Back     alignment and function description
>sp|Q8K330|SSH3_MOUSE Protein phosphatase Slingshot homolog 3 OS=Mus musculus GN=Ssh3 PE=1 SV=1 Back     alignment and function description
>sp|Q8TE77|SSH3_HUMAN Protein phosphatase Slingshot homolog 3 OS=Homo sapiens GN=SSH3 PE=1 SV=2 Back     alignment and function description
>sp|Q6IVY4|SSH_XENLA Protein phosphatase Slingshot homolog OS=Xenopus laevis GN=ssh PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
328790589 1306 PREDICTED: hypothetical protein LOC72461 0.611 0.148 0.694 8e-86
383854174 1191 PREDICTED: uncharacterized protein LOC10 0.624 0.166 0.646 2e-83
242008686 1185 slingshot dual specificity phosphatase, 0.706 0.189 0.576 2e-82
380023193 1359 PREDICTED: uncharacterized protein LOC10 0.624 0.145 0.642 3e-82
345494048 1279 PREDICTED: hypothetical protein LOC10012 0.624 0.154 0.638 6e-82
340719097 1199 PREDICTED: hypothetical protein LOC10065 0.624 0.165 0.634 7e-82
350423294 1203 PREDICTED: hypothetical protein LOC10074 0.624 0.164 0.634 8e-82
270014017 1022 hypothetical protein TcasGA2_TC012711 [T 0.624 0.193 0.608 6e-80
91090936 1048 PREDICTED: similar to slingshot dual spe 0.624 0.188 0.608 8e-80
328697436 1184 PREDICTED: hypothetical protein LOC10016 0.675 0.180 0.578 1e-79
>gi|328790589|ref|XP_001120507.2| PREDICTED: hypothetical protein LOC724613 [Apis mellifera] Back     alignment and taxonomy information
 Score =  323 bits (827), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 159/229 (69%), Positives = 175/229 (76%), Gaps = 35/229 (15%)

Query: 1   AVKLESVHPDRTRYLVVVSCDEQGD--ESCLLGIDCNQTTTVGLVLRVLADTSITLDGDG 58
           AVKLESVHP RTRYLVVVSC  + D  ESCLLGIDC+   TVGLVLRVLADT+ITLDGDG
Sbjct: 93  AVKLESVHPGRTRYLVVVSCTGRQDAEESCLLGIDCHTRATVGLVLRVLADTAITLDGDG 152

Query: 59  GFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASD 118
           GFSV VCG QHIFKPVSVQAMWSALQ+LHKVSS AR++NYFL G SH+WVS+YE +I SD
Sbjct: 153 GFSVSVCGSQHIFKPVSVQAMWSALQTLHKVSSKAREQNYFLGGLSHDWVSYYEQRIESD 212

Query: 119 RSCLNEWHAMDSLESRRPPSPDSLRDK--------------------------------- 145
           RSCLNEWHAMD+LESRRPPSPDS+R K                                 
Sbjct: 213 RSCLNEWHAMDNLESRRPPSPDSVRTKPRERDETERVIRSTLKEIMIKEKKTGGWIVPPR 272

Query: 146 VCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAK 194
           V HILNVTREIDNFFPG+F Y N+RVYDD+KTDLLKHWD+T+KYIT AK
Sbjct: 273 VRHILNVTREIDNFFPGMFTYLNVRVYDDEKTDLLKHWDDTFKYITKAK 321

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|383854174|ref|XP_003702597.1| PREDICTED: uncharacterized protein LOC100877919 [Megachile rotundata] Back     alignment and taxonomy information
>gi|242008686|ref|XP_002425133.1| slingshot dual specificity phosphatase, putative [Pediculus humanus corporis] gi|212508807|gb|EEB12395.1| slingshot dual specificity phosphatase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|380023193|ref|XP_003695410.1| PREDICTED: uncharacterized protein LOC100866977 [Apis florea] Back     alignment and taxonomy information
>gi|345494048|ref|XP_001606169.2| PREDICTED: hypothetical protein LOC100122558 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|340719097|ref|XP_003397993.1| PREDICTED: hypothetical protein LOC100651687 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350423294|ref|XP_003493434.1| PREDICTED: hypothetical protein LOC100748426 [Bombus impatiens] Back     alignment and taxonomy information
>gi|270014017|gb|EFA10465.1| hypothetical protein TcasGA2_TC012711 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|91090936|ref|XP_974392.1| PREDICTED: similar to slingshot dual specificity phosphatase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328697436|ref|XP_001942859.2| PREDICTED: hypothetical protein LOC100168094 [Acyrthosiphon pisum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query317
FB|FBgn0029157 1045 ssh "slingshot" [Drosophila me 0.381 0.115 0.702 5.4e-62
UNIPROTKB|F1P4Y2456 F1P4Y2 "Uncharacterized protei 0.347 0.241 0.581 1e-54
UNIPROTKB|E1BPN5 1373 SSH2 "Uncharacterized protein" 0.454 0.104 0.553 2.9e-53
ZFIN|ZDB-GENE-030131-5909 939 ssh1b "slingshot homolog 1b (D 0.454 0.153 0.506 9.2e-53
UNIPROTKB|F1NFJ2 719 F1NFJ2 "Uncharacterized protei 0.454 0.200 0.553 1.3e-52
ZFIN|ZDB-GENE-040724-201 884 ssh1a "slingshot homolog 1a (D 0.457 0.164 0.536 5.6e-52
UNIPROTKB|F1NKC5477 F1NKC5 "Uncharacterized protei 0.381 0.253 0.576 1.4e-51
UNIPROTKB|F1P3I1 1261 F1P3I1 "Uncharacterized protei 0.454 0.114 0.553 1.8e-51
ZFIN|ZDB-GENE-030131-3810 1175 ssh2a "slingshot homolog 2a (D 0.438 0.118 0.541 3.7e-51
UNIPROTKB|Q76I76 1423 SSH2 "Protein phosphatase Slin 0.454 0.101 0.553 4.3e-51
FB|FBgn0029157 ssh "slingshot" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 472 (171.2 bits), Expect = 5.4e-62, Sum P(2) = 5.4e-62
 Identities = 85/121 (70%), Positives = 106/121 (87%)

Query:    25 DESCLLGIDCNQTTTVGLVLRVLADTSITLDGDGGFSVCVCGRQHIFKPVSVQAMWSALQ 84
             +ESCLLGIDCN+ TT+GLV+ +LADT+I LDGDGGFSV V  + HIFKPVSVQAMWSALQ
Sbjct:   199 EESCLLGIDCNERTTIGLVVPILADTTIHLDGDGGFSVKVYEKTHIFKPVSVQAMWSALQ 258

Query:    85 SLHKVSSVARDKNYFLNGGSHEWVSHYEAKIASDRSCLNEWHAMDSLESRRPPSPDSLRD 144
             +LHKVS  AR+ N++ +G SH+W+S YE +I SD+SCLNEW+AMD+LESRRPPSPD++R+
Sbjct:   259 TLHKVSKKARENNFYASGPSHDWLSSYERRIESDQSCLNEWNAMDALESRRPPSPDAIRN 318

Query:   145 K 145
             K
Sbjct:   319 K 319
GO:0006470 "protein dephosphorylation" evidence=IBA;NAS
GO:0017017 "MAP kinase tyrosine/serine/threonine phosphatase activity" evidence=IDA;NAS
GO:0008330 "protein tyrosine/threonine phosphatase activity" evidence=NAS
GO:0008138 "protein tyrosine/serine/threonine phosphatase activity" evidence=ISS;NAS
GO:0030036 "actin cytoskeleton organization" evidence=NAS
GO:0008064 "regulation of actin polymerization or depolymerization" evidence=IMP
GO:0005856 "cytoskeleton" evidence=IEA
GO:0003677 "DNA binding" evidence=IEA
GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA
GO:0050770 "regulation of axonogenesis" evidence=IMP
GO:0016319 "mushroom body development" evidence=IMP
GO:0010591 "regulation of lamellipodium assembly" evidence=IMP
GO:0000278 "mitotic cell cycle" evidence=IMP
GO:0048749 "compound eye development" evidence=IGI
GO:0003779 "actin binding" evidence=IBA
GO:0005737 "cytoplasm" evidence=IBA
UNIPROTKB|F1P4Y2 F1P4Y2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BPN5 SSH2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5909 ssh1b "slingshot homolog 1b (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NFJ2 F1NFJ2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040724-201 ssh1a "slingshot homolog 1a (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NKC5 F1NKC5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P3I1 F1P3I1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3810 ssh2a "slingshot homolog 2a (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q76I76 SSH2 "Protein phosphatase Slingshot homolog 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6NN85SSH_DROME3, ., 1, ., 3, ., 4, 80.54950.54570.1655yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!
3rd Layer3.1.3.48LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
cd11652233 cd11652, SSH-N, N-terminal domain conserved in sli 7e-74
pfam0876654 pfam08766, DEK_C, DEK C terminal domain 3e-12
smart00195138 smart00195, DSPc, Dual specificity phosphatase, ca 1e-06
cd00127139 cd00127, DSPc, Dual specificity phosphatases (DSP) 3e-04
>gnl|CDD|212166 cd11652, SSH-N, N-terminal domain conserved in slingshot (SSH) phosphatases Back     alignment and domain information 
 Score =  226 bits (579), Expect = 7e-74
 Identities = 87/143 (60%), Positives = 105/143 (73%), Gaps = 5/143 (3%)

Query: 1   AVKLESVHPDRTRYLVVVSCDEQGD--ESCLLGIDCNQ---TTTVGLVLRVLADTSITLD 55
           AV+LESV  +RTRYLVVVS   + D  ES LLG+D      + T+GLVL + +DT + LD
Sbjct: 91  AVRLESVRSNRTRYLVVVSTLGRQDTEESILLGVDFPPKESSCTIGLVLPIWSDTQVHLD 150

Query: 56  GDGGFSVCVCGRQHIFKPVSVQAMWSALQSLHKVSSVARDKNYFLNGGSHEWVSHYEAKI 115
           GDGGFSV   G+ HIFKPVSVQAMWSALQ LHK   VAR+ NYF  G +  WVS+Y+++I
Sbjct: 151 GDGGFSVTSDGKTHIFKPVSVQAMWSALQVLHKACEVAREANYFPGGLALTWVSYYQSRI 210

Query: 116 ASDRSCLNEWHAMDSLESRRPPS 138
           +SD+SCLNEW AMD LES RP S
Sbjct: 211 SSDQSCLNEWEAMDDLESHRPDS 233

This domain or region conserved in Bilateria is found N-terminal to the DEK_C-like and catalytic domains of slingshot phosphatases. Slingshot is a cofilin-specific phosphatase. Dephosphorylation reactivates cofilin, which in turn depolymerizes actin and is thus required for actin filament reorganization. Slingshot is a member of the dual-specificity protein phosphatase family. This N-terminal SSH region may be involved in P-cofilin binding (the model C-terminus plus the DEK_C-like domain, which are characterized as the "B" domain in some of the literature), and may be required for the F-actin mediated activation of slingshot (the N-terminal region of this model, sometimes referred to as the "A" domain). Length = 233
>gnl|CDD|204056 pfam08766, DEK_C, DEK C terminal domain Back     alignment and domain information
>gnl|CDD|214551 smart00195, DSPc, Dual specificity phosphatase, catalytic domain Back     alignment and domain information
>gnl|CDD|238073 cd00127, DSPc, Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 317
KOG1716|consensus285 99.83
KOG1718|consensus198 99.83
KOG1717|consensus343 99.76
smart00195138 DSPc Dual specificity phosphatase, catalytic domai 99.61
PF00782133 DSPc: Dual specificity phosphatase, catalytic doma 99.57
cd00127139 DSPc Dual specificity phosphatases (DSP); Ser/Thr 99.37
PRK12361 547 hypothetical protein; Provisional 99.14
PTZ00242166 protein tyrosine phosphatase; Provisional 98.12
KOG1719|consensus183 97.46
COG2453180 CDC14 Predicted protein-tyrosine phosphatase [Sign 97.39
PTZ00393241 protein tyrosine phosphatase; Provisional 97.09
PF0876654 DEK_C: DEK C terminal domain; InterPro: IPR014876 96.23
KOG1720|consensus225 83.27
>KOG1716|consensus Back     alignment and domain information 
Probab=99.83  E-value=3.7e-21  Score=180.78  Aligned_cols=108  Identities=20%  Similarity=0.211  Sum_probs=100.7

Q ss_pred             cccCceeEEEEeecccCCC--CCC-CceeeEEEeccCCCcchHHHHHHHHHhHhhcCCCCCC-----------cHHHHHH
Q psy6368         141 SLRDKVCHILNVTREIDNF--FPG-IFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRD-----------ETEKIIR  206 (317)
Q Consensus       141 ~~r~kIthILNVA~ei~N~--FPg-~f~Yk~I~V~D~p~tdLl~hf~e~~dFId~Ar~sgg~-----------SaeiVIa  206 (317)
                      +.+.+|+|||||+.++++.  ++. +|.|++|++.|.+++||+.||+++++||+.|+..||+           |+++|||
T Consensus        96 l~~~~it~vln~~~~~~~~~~~~~~~~~y~~i~~~D~~~~~i~~~~~~~~~fI~~a~~~~~~vlVHC~~GvSRSat~viA  175 (285)
T KOG1716|consen   96 LKKLGITHVLNVSSSCPNPRFLKEQGIKYLRIPVEDNPSTDILQHFPEAISFIEKAREKGGKVLVHCQAGVSRSATLVIA  175 (285)
T ss_pred             HHHcCCCEEEEecccCCccccccccCceEEeccccCCccccHHHHHHHHHHHHHHHHhCCCeEEEEcCCccchhHHHHHH
Confidence            4678999999999999994  444 8999999999999999999999999999999999885           8999999


Q ss_pred             HHHHhccccccc--chhhhHHHHhhcChhhhhhhhhhHHHHhhh
Q psy6368         207 STLKEIIMSVDL--DEVTSKYIRSRLEDIMDSDLGEYKSFIDQL  248 (317)
Q Consensus       207 YLMk~immS~DL--e~VksKr~R~rPN~GF~~QLkeYe~fId~e  248 (317)
                      |+|+..+|+++.  +.||.+|+.+.||.||+.||.+|++.+...
T Consensus       176 YlM~~~~~~l~~A~~~vk~~R~~i~PN~gf~~QL~~~e~~l~~~  219 (285)
T KOG1716|consen  176 YLMKYEGLSLEDAYELVKSRRPIISPNFGFLRQLLEFEKRLSKK  219 (285)
T ss_pred             HHHHHcCCCHHHHHHHHHHhCCccCCCHHHHHHHHHHHHhhccC
Confidence            999999999985  699999999999999999999999999876

>KOG1718|consensus Back     alignment and domain information
>KOG1717|consensus Back     alignment and domain information
>smart00195 DSPc Dual specificity phosphatase, catalytic domain Back     alignment and domain information
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity Back     alignment and domain information
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases Back     alignment and domain information
>PRK12361 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00242 protein tyrosine phosphatase; Provisional Back     alignment and domain information
>KOG1719|consensus Back     alignment and domain information
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00393 protein tyrosine phosphatase; Provisional Back     alignment and domain information
>PF08766 DEK_C: DEK C terminal domain; InterPro: IPR014876 DEK is a chromatin associated protein that is linked with cancers and autoimmune disease Back     alignment and domain information
>KOG1720|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
2nt2_A145 Crystal Structure Of Slingshot Phosphatase 2 Length 4e-16
3s4e_A144 Crystal Structrue Of A Novel Mitogen-Activated Prot 8e-04
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2 Length = 145 Back     alignment and structure 
Iteration: 1

 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 12/73 (16%)
Query: 124 EWHA--MDSLESRRPPSPDSLRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLK 181
           EW+A  ++ L++R           V +ILNVTREIDNFFPG+F+Y NIRVYD++ TDLL 
Sbjct: 16  EWNASNLEDLQNR----------GVRYILNVTREIDNFFPGVFEYHNIRVYDEEATDLLA 65
Query: 182 HWDNTYKYITSAK 194
           +W++TYK+I+ AK
Sbjct: 66  YWNDTYKFISKAK 78
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein Kinase Phosphatase, Skrp1 Length = 144 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query317
2nt2_A145 Protein phosphatase slingshot homolog 2; alpha/bet 2e-14
3ezz_A144 Dual specificity protein phosphatase 4; alpha/beta 5e-14
2q05_A195 Late protein H1, dual specificity protein phosphat 4e-13
3s4e_A144 Dual specificity protein phosphatase 19; PTP, prot 4e-13
3cm3_A176 Late protein H1, dual specificity protein phosphat 5e-13
3emu_A161 Leucine rich repeat and phosphatase domain contain 5e-13
2g6z_A211 Dual specificity protein phosphatase 5; alpha/beta 1e-12
2wgp_A190 Dual specificity protein phosphatase 14; MKP6, DUS 2e-12
2hcm_A164 Dual specificity protein phosphatase; structural g 2e-12
2esb_A188 Dual specificity protein phosphatase 18; alpha/bet 3e-12
2hxp_A155 Dual specificity protein phosphatase 9; human phos 9e-12
1yz4_A160 DUSP15, dual specificity phosphatase-like 15 isofo 1e-11
1zzw_A149 Dual specificity protein phosphatase 10; MKP, PTP, 2e-11
2oud_A177 Dual specificity protein phosphatase 10; A central 3e-11
1wrm_A165 Dual specificity phosphatase 22; DSP, JNK, hydrola 3e-11
2r0b_A154 Serine/threonine/tyrosine-interacting protein; str 7e-11
2e0t_A151 Dual specificity phosphatase 26; conserved hypothe 1e-09
2y96_A219 Dual specificity phosphatase DUPD1; hydrolase; 2.3 5e-09
3f81_A183 Dual specificity protein phosphatase 3; hydrolase, 2e-08
2pq5_A205 Dual specificity protein phosphatase 13; hydrolase 2e-08
2j16_A182 SDP-1, tyrosine-protein phosphatase YIL113W; hydro 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
3rgo_A157 Protein-tyrosine phosphatase mitochondrial 1; phos 8e-06
3nme_A294 Ptpkis1 protein, SEX4 glucan phosphatase; dual spe 2e-04
1q1v_A70 DEK protein; winged-helix motif, DNA binding prote 4e-04
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} Length = 145 Back     alignment and structure
 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 38/73 (52%), Positives = 54/73 (73%), Gaps = 10/73 (13%)

Query: 123 NEWHAMDSLESRRPPSPDSLRD-KVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLK 181
           +EW+A +          + L++  V +ILNVTREIDNFFPG+F+Y NIRVYD++ TDLL 
Sbjct: 15  SEWNASN---------LEDLQNRGVRYILNVTREIDNFFPGVFEYHNIRVYDEEATDLLA 65

Query: 182 HWDNTYKYITSAK 194
           +W++TYK+I+ AK
Sbjct: 66  YWNDTYKFISKAK 78
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A Length = 144 Back     alignment and structure
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} Length = 195 Back     alignment and structure
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} Length = 144 Back     alignment and structure
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A Length = 176 Back     alignment and structure
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} Length = 161 Back     alignment and structure
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} Length = 211 Back     alignment and structure
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} Length = 190 Back     alignment and structure
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} Length = 164 Back     alignment and structure
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} Length = 188 Back     alignment and structure
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A Length = 155 Back     alignment and structure
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} Length = 160 Back     alignment and structure
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} Length = 149 Back     alignment and structure
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} Length = 177 Back     alignment and structure
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} Length = 165 Back     alignment and structure
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} Length = 154 Back     alignment and structure
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} Length = 151 Back     alignment and structure
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens} Length = 219 Back     alignment and structure
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} PDB: 1vhr_A* 1j4x_A* Length = 183 Back     alignment and structure
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A Length = 205 Back     alignment and structure
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B Length = 182 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* Length = 157 Back     alignment and structure
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Length = 294 Back     alignment and structure
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1 Length = 70 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
3emu_A161 Leucine rich repeat and phosphatase domain contain 99.84
3s4e_A144 Dual specificity protein phosphatase 19; PTP, prot 99.8
3ezz_A144 Dual specificity protein phosphatase 4; alpha/beta 99.79
2nt2_A145 Protein phosphatase slingshot homolog 2; alpha/bet 99.79
2j16_A182 SDP-1, tyrosine-protein phosphatase YIL113W; hydro 99.73
2esb_A188 Dual specificity protein phosphatase 18; alpha/bet 99.7
2g6z_A211 Dual specificity protein phosphatase 5; alpha/beta 99.69
2hxp_A155 Dual specificity protein phosphatase 9; human phos 99.69
2hcm_A164 Dual specificity protein phosphatase; structural g 99.67
1zzw_A149 Dual specificity protein phosphatase 10; MKP, PTP, 99.66
2oud_A177 Dual specificity protein phosphatase 10; A central 99.66
2r0b_A154 Serine/threonine/tyrosine-interacting protein; str 99.66
2wgp_A190 Dual specificity protein phosphatase 14; MKP6, DUS 99.62
3f81_A183 Dual specificity protein phosphatase 3; hydrolase, 99.62
1wrm_A165 Dual specificity phosphatase 22; DSP, JNK, hydrola 99.62
2e0t_A151 Dual specificity phosphatase 26; conserved hypothe 99.61
2pq5_A205 Dual specificity protein phosphatase 13; hydrolase 99.61
1yz4_A160 DUSP15, dual specificity phosphatase-like 15 isofo 99.6
3cm3_A176 Late protein H1, dual specificity protein phosphat 99.59
2y96_A219 Dual specificity phosphatase DUPD1; hydrolase; 2.3 99.59
3rgo_A157 Protein-tyrosine phosphatase mitochondrial 1; phos 99.42
2q05_A195 Late protein H1, dual specificity protein phosphat 99.36
3nme_A294 Ptpkis1 protein, SEX4 glucan phosphatase; dual spe 99.17
4erc_A150 Dual specificity protein phosphatase 23; alpha bet 99.1
2img_A151 Dual specificity protein phosphatase 23; DUSP23, V 99.03
2i6j_A161 Ssoptp, sulfolobus solfataricus protein tyrosine p 98.71
1yn9_A169 BVP, polynucleotide 5'-phosphatase; RNA triphospha 98.69
1ohe_A348 CDC14B, CDC14B2 phosphatase; protein phosphatase, 98.46
2c46_A241 MRNA capping enzyme; phosphatase, transferase, hyd 98.36
1fpz_A212 Cyclin-dependent kinase inhibitor 3; alpha-beta sa 98.22
3s4o_A167 Protein tyrosine phosphatase-like protein; structu 97.92
1rxd_A159 Protein tyrosine phosphatase type IVA, member 1; p 97.79
3rz2_A189 Protein tyrosine phosphatase type IVA 1; tyrosine 97.68
1xri_A151 AT1G05000; structural genomics, protein structure 96.98
3gxh_A157 Putative phosphatase (DUF442); YP_001181608.1, str 91.88
1q1v_A70 DEK protein; winged-helix motif, DNA binding prote 90.78
2f46_A156 Hypothetical protein; structural genomics, joint c 86.64
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} Back     alignment and structure
Probab=99.84  E-value=1.2e-21  Score=166.70  Aligned_cols=109  Identities=15%  Similarity=0.191  Sum_probs=94.0

Q ss_pred             cccCceeEEEEeecccCCCCCCCceeeEEEeccCCCcchHHHHHHHHHhHhhcCCCCCC-----------cHHHHHHHHH
Q psy6368         141 SLRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRD-----------ETEKIIRSTL  209 (317)
Q Consensus       141 ~~r~kIthILNVA~ei~N~FPg~f~Yk~I~V~D~p~tdLl~hf~e~~dFId~Ar~sgg~-----------SaeiVIaYLM  209 (317)
                      +.+++||||||++.+.++.|++++.|+++++.|.+.+++..+|+++++||++++..|+.           |++++|||||
T Consensus        31 L~~~gIt~Vlnl~~~~~~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm  110 (161)
T 3emu_A           31 IHNNNISSILLVGIEVPSLFKDQCDILRLDIVSEEGHQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLM  110 (161)
T ss_dssp             HHHTTEEEEEEEC-------CTTSEEEEECCCCSSTTHHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHHHHHHHH
T ss_pred             HHHCCCCEEEEeCCCCccccCCCCEEEEEeCcCCCCCcHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999997766553           8899999999


Q ss_pred             Hhccccccc--chhhhHHHHhhcChhhhhhhhhhHHHHhhhh
Q psy6368         210 KEIIMSVDL--DEVTSKYIRSRLEDIMDSDLGEYKSFIDQLE  249 (317)
Q Consensus       210 k~immS~DL--e~VksKr~R~rPN~GF~~QLkeYe~fId~e~  249 (317)
                      ++.+|+++.  +.|+++|+.+.||.||+.||++||+.+...+
T Consensus       111 ~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~~~~  152 (161)
T 3emu_A          111 YYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEKKLEKMN  152 (161)
T ss_dssp             HHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCHHHHHHHHHHHCCCcCCCHHHHHHHHHHHHHHhcCC
Confidence            999999985  6999999999999999999999999998773
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} Back     alignment and structure
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A Back     alignment and structure
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} Back     alignment and structure
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} Back     alignment and structure
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} Back     alignment and structure
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A Back     alignment and structure
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} Back     alignment and structure
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} Back     alignment and structure
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} Back     alignment and structure
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} Back     alignment and structure
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} Back     alignment and structure
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A* Back     alignment and structure
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} Back     alignment and structure
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} Back     alignment and structure
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A Back     alignment and structure
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} Back     alignment and structure
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A Back     alignment and structure
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens} Back     alignment and structure
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* Back     alignment and structure
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} Back     alignment and structure
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A Back     alignment and structure
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} Back     alignment and structure
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* Back     alignment and structure
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} Back     alignment and structure
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A Back     alignment and structure
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A Back     alignment and structure
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* Back     alignment and structure
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} Back     alignment and structure
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A Back     alignment and structure
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A Back     alignment and structure
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A Back     alignment and structure
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* Back     alignment and structure
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1 Back     alignment and structure
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 317
d1q1va_70 a.159.4.1 (A:) DEK C-terminal domain {Human (Homo 3e-13
d1m3ga_145 c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapien 0.004
>d1q1va_ a.159.4.1 (A:) DEK C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 70 Back     information, alignment and structure

class: All alpha proteins
fold: Another 3-helical bundle
superfamily: DEK C-terminal domain
family: DEK C-terminal domain
domain: DEK C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (150), Expect = 3e-13
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 193 AKPSQRDETEKIIRSTLKEIIMSVDLDEVTSKYIRSRLEDIM-DSDLGEYKSFIDQL 248
            K  ++  T++ ++ T+K+++ S +L+EVT K I  ++ +     DL E K FI   
Sbjct: 5   IKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLTERKDFIKTT 61
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} Length = 145 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query317
d1m3ga_145 Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax 99.8
d1mkpa_144 Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp 99.75
d1vhra_178 VH1-related dual-specificity phosphatase, VHR {Hum 99.68
d1i9sa_194 mRNA capping enzyme, triphosphatase domain {Mouse 98.43
d1ohea2182 Proline directed phosphatase CDC14b2 {Human (Homo 98.03
d1fpza_176 Kinase associated phosphatase (kap) {Human (Homo s 97.34
d1q1va_70 DEK C-terminal domain {Human (Homo sapiens) [TaxId 96.67
d1rxda_152 Protein tyrosine phosphatase type IVa {Human (Homo 96.6
d1d5ra2174 Phoshphoinositide phosphatase Pten (Pten tumor sup 89.88
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Mapk phosphatase
species: Human (Homo sapiens), pac-1 [TaxId: 9606]

Probab=99.80  E-value=2.8e-21  Score=160.04  Aligned_cols=105  Identities=17%  Similarity=0.204  Sum_probs=97.5

Q ss_pred             cccCceeEEEEeecccCCCCCCCceeeEEEeccCCCcchHHHHHHHHHhHhhcCCCCCC-----------cHHHHHHHHH
Q psy6368         141 SLRDKVCHILNVTREIDNFFPGIFDYCNIRVYDDDKTDLLKHWDNTYKYITSAKPSQRD-----------ETEKIIRSTL  209 (317)
Q Consensus       141 ~~r~kIthILNVA~ei~N~FPg~f~Yk~I~V~D~p~tdLl~hf~e~~dFId~Ar~sgg~-----------SaeiVIaYLM  209 (317)
                      +.+++|+||||++.+.++++++.+.|+++++.|.+.+++..+|+++.+||+++...|++           |++++|||+|
T Consensus        25 L~~~gI~~Iin~~~~~~~~~~~~~~y~~i~i~D~~~~~i~~~~~~~~~~i~~~~~~~~~VlVHC~~G~sRS~~v~~aYLm  104 (145)
T d1m3ga_          25 LQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLM  104 (145)
T ss_dssp             HHHHTCSEEEECSSSSSEEECSSSEEEECCCCCSTTCCCTTSHHHHHHHHHHHHHTTCCEEECCSSSSSHHHHHHHHHHH
T ss_pred             HHHcCCcEEEEecCCCCcCCCCceEEEEEeccCCchhhHHHHHHHHHHHHHHhhccCceEEEEcccccccHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999999999998877653           8999999999


Q ss_pred             Hhccccccc--chhhhHHHHhhcChhhhhhhhhhHHHH
Q psy6368         210 KEIIMSVDL--DEVTSKYIRSRLEDIMDSDLGEYKSFI  245 (317)
Q Consensus       210 k~immS~DL--e~VksKr~R~rPN~GF~~QLkeYe~fI  245 (317)
                      ++.+|+++.  ++|+++|+.++||.||+.||.+||+-|
T Consensus       105 ~~~~~~~~~A~~~v~~~Rp~v~pn~~f~~qL~~~e~~l  142 (145)
T d1m3ga_         105 QSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFETQV  142 (145)
T ss_dssp             HTTCCHHHHHHHHHSCSCCCCSSCSSCCCCSHHHHHHH
T ss_pred             HHhCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHh
Confidence            999999984  799999999999999999999999765
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} Back     information, alignment and structure
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1va_ a.159.4.1 (A:) DEK C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} Back     information, alignment and structure
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure