Psyllid ID: psy6415

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL
Secondary Structure (PSIPRED)
cEEEEEccccEEEEEcccccEEEEEEccccEEEEEEccccccccEEEEEEEccEEEEEEccccccccccccEEEEccccccEEEEEcccccccEEEEEcccccEEEEEEHHHHHccccccEEEEccccccccccccccccccccccccHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEcccccEEEEEccccEEEEEEEccccEEEEEEccccccccEEEEEEccccEEEEEcccccccccccEEEEEcccccEEEEEccccccccEEEEEcccccEEEEEEccccccccccEEEEccccccccccEEEccccccccccEEHHHHcccEcccccEEEcccccccccc
Coil and Loop (DISEMBL)
mvvagydngdlkmfdLKTMSLKWEtnlkngvcgvdfdrrdipmnKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAkhlpqnrdlfvtcggsgslNLWQLVSALRADtnlcsifryssnyptqrtkpdiddipmgvpgsltllqeatlssqpinsldwsadklgl
Flexible Loop (DISEMBL)
mvvagydngdlkmfDLKTMSLKWETNLkngvcgvdfdrrDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRyssnyptqrtkpdiddIPMGVPGSLTLLQEatlssqpinsldwsadklgl
Low Complexity Region (SEG)
MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL
Disordered region (IsUnstruct)
****GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYP********************************************
Disordered Region (DISOPRED)
MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRY**NY*********DDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG*
Disordered Region (DISEMBL)
MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL
Disordered Region (DISPRO)
MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSAD****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	174	2.2.26 [Sep-21-2011]
A4QNE6	358	WD repeat-containing prot	yes	N/A	0.890	0.432	0.568	6e-55
Q561Y0	358	WD repeat-containing prot	yes	N/A	0.885	0.430	0.578	1e-54
Q29RZ9	357	WD repeat-containing prot	yes	N/A	0.890	0.434	0.574	1e-54
Q8BGF3	357	WD repeat-containing prot	yes	N/A	0.890	0.434	0.574	1e-54
Q96MX6	357	WD repeat-containing prot	yes	N/A	0.890	0.434	0.580	2e-54
Q5M7F6	358	WD repeat-containing prot	N/A	N/A	0.885	0.430	0.572	3e-53
Q54E33	357	WD repeat-containing prot	yes	N/A	0.614	0.299	0.25	5e-07

>sp|A4QNE6|WDR92_XENTR WD repeat-containing protein 92 OS=Xenopus tropicalis GN=wdr92 PE=2 SV=1

 Score =  213 bits (541), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 99/174 (56%), Positives = 130/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+K+FDL+ MS++WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct: 183 LVCAGYDNGDIKLFDLRNMSVRWETNIKNGVCSLEFDRKDIVMNKLVATSLEGKFHVFDM 242

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           +T H  KGFA +SEKAHK +T+W  +HLPQNRD+F+T GG+G+L+LW+            
Sbjct: 243 RTQHPSKGFASMSEKAHK-STIWQVRHLPQNRDVFMTSGGAGNLHLWKY----------- 290

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                   YP QR++ D DD+ MGV GS++LLQ  TLS+QPI+S+DWS DK GL
Sbjct: 291 -------EYPAQRSRKDSDDVDMGVAGSVSLLQNVTLSTQPISSMDWSPDKKGL 337

Seems to act as a modulator of apoptosis.
Xenopus tropicalis (taxid: 8364)

>sp|Q561Y0|WDR92_DANRE WD repeat-containing protein 92 OS=Danio rerio GN=wdr92 PE=2 SV=1

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/173 (57%), Positives = 126/173 (72%), Gaps = 19/173 (10%)

Query: 2   VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
           V AGYDNGD+K+FDL+ MSL+WE N++NGVC V+FDR+DI MNKLVAT+LE K  VFD++
Sbjct: 184 VCAGYDNGDIKLFDLRNMSLRWEKNIRNGVCSVEFDRKDINMNKLVATSLEGKFHVFDMR 243

Query: 62  TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCS 121
           T H  KGFA +SEKAHK +T+W  +HLPQNRD+F+T GG+G+L+LW+             
Sbjct: 244 TQHPSKGFASVSEKAHK-STIWQVRHLPQNRDVFMTAGGAGNLHLWKY------------ 290

Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  YP QR+K   DD+ MGV GS+ LLQ  TLS+QPI+SLDWS DK GL
Sbjct: 291 ------EYPAQRSKKGADDVEMGVAGSVNLLQNVTLSTQPISSLDWSPDKQGL 337

Seems to act as a modulator of apoptosis.

Danio rerio (taxid: 7955)

>sp|Q29RZ9|WDR92_BOVIN WD repeat-containing protein 92 OS=Bos taurus GN=WDR92 PE=2 SV=1

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/174 (57%), Positives = 129/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct: 182 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           +T H  KGFA +SEKAHK +TVW  +HLPQNR++F+T GG+GSL+LW+            
Sbjct: 242 RTQHPTKGFASVSEKAHK-STVWQVRHLPQNREVFLTAGGAGSLHLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                   YP QR+K D + + MGV GS++LLQ  TLS+QP++SLDWS DK GL
Sbjct: 290 -------EYPIQRSKKDSEGVEMGVAGSVSLLQNVTLSTQPVSSLDWSPDKRGL 336

Seems to act as a modulator of apoptosis.

Bos taurus (taxid: 9913)

>sp|Q8BGF3|WDR92_MOUSE WD repeat-containing protein 92 OS=Mus musculus GN=Wdr92 PE=2 SV=1

 Score =  212 bits (539), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 100/174 (57%), Positives = 130/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct: 182 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           +T H  KGFA ++EKAHK +TVW  +HLPQNR++F+T GG+GSL+LW+            
Sbjct: 242 RTQHPTKGFASVTEKAHK-STVWQVRHLPQNREIFLTTGGAGSLHLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                   YPTQR+K D + + MGV GS++LLQ  T+S+QPI+SLDWS DK GL
Sbjct: 290 -------EYPTQRSKKDSEGLEMGVAGSVSLLQNVTVSTQPISSLDWSPDKRGL 336

Seems to act as a modulator of apoptosis.

Mus musculus (taxid: 10090)

>sp|Q96MX6|WDR92_HUMAN WD repeat-containing protein 92 OS=Homo sapiens GN=WDR92 PE=1 SV=1

 Score =  211 bits (537), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/174 (58%), Positives = 128/174 (73%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+K+FDL+ M+L+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct: 182 VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           +T H  KGFA +SEKAHK +TVW  +HLPQNR+LF+T GG+G L+LW+            
Sbjct: 242 RTQHPTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAGGLHLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                   YP QR+K D + I MGV GS++LLQ  TLS+QPI+SLDWS DK GL
Sbjct: 290 -------EYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336

Seems to act as a modulator of apoptosis.

Homo sapiens (taxid: 9606)

>sp|Q5M7F6|WDR92_XENLA WD repeat-containing protein 92 OS=Xenopus laevis GN=wdr92 PE=2 SV=1

 Score =  207 bits (526), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 99/173 (57%), Positives = 126/173 (72%), Gaps = 19/173 (10%)

Query: 2   VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
           V AGYDNGD+K+FDL+ MS++WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD++
Sbjct: 184 VCAGYDNGDIKLFDLRNMSVRWETNIKNGVCSLEFDRKDIVMNKLVATSLEGKFHVFDMR 243

Query: 62  TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCS 121
           T H  KGFA +SEKAHK +TVW  +HLPQNRD+F+T GG+G+L+LW+             
Sbjct: 244 TQHPTKGFASVSEKAHK-STVWQVRHLPQNRDVFMTSGGAGNLHLWKY------------ 290

Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  YP QR++ D D +  GV GS +LLQ  TLS+QPI+SLDWS DK GL
Sbjct: 291 ------EYPAQRSRKDSDGVDTGVAGSASLLQNVTLSTQPISSLDWSPDKKGL 337

Seems to act as a modulator of apoptosis.

Xenopus laevis (taxid: 8355)

>sp|Q54E33|WDR92_DICDI WD repeat-containing protein 92 homolog OS=Dictyostelium discoideum GN=wdr92 PE=4 SV=1

 Score = 53.9 bits (128), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 5/112 (4%)

Query: 2   VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
           ++AG++NGDL +++LKT S++  T L  G+C +D + R   +N+ + TT ++ + +    
Sbjct: 201 IIAGFENGDLNIYNLKTNSIQSTTKLNGGICSIDSNDRSNILNQFLITTNKSFISIASFN 260

Query: 62  TLHREK-GFAYLSEKAHKATTVWAAKHLP----QNRDLFVTCGGSGSLNLWQ 108
             +     F           T+W+  + P     N ++F    G GS+++++
Sbjct: 261 NNNNNNIEFKDYDINKEPNQTIWSGIYSPWNKKDNENIFTIAQGDGSVSMYR 312

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
405971711	355	WD repeat-containing protein 92 [Crassos	0.890	0.436	0.624	6e-57
242019997	354	conserved hypothetical protein [Pediculu	0.890	0.437	0.620	6e-57
322788169	357	hypothetical protein SINV_06071 [Solenop	0.890	0.434	0.614	2e-56
156352990	355	predicted protein [Nematostella vectensi	0.885	0.433	0.618	6e-56
332027634	357	WD repeat-containing protein 92 [Acromyr	0.890	0.434	0.609	8e-56
224046999	360	PREDICTED: WD repeat-containing protein	0.890	0.430	0.609	4e-55
66508641	357	PREDICTED: WD repeat-containing protein	0.890	0.434	0.603	1e-54
380024895	357	PREDICTED: WD repeat-containing protein	0.890	0.434	0.603	2e-54
340713853	357	PREDICTED: WD repeat-containing protein	0.890	0.434	0.597	2e-54
350409625	357	PREDICTED: WD repeat-containing protein	0.890	0.434	0.603	2e-54

>gi|405971711|gb|EKC36534.1| WD repeat-containing protein 92 [Crassostrea gigas]

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 108/173 (62%), Positives = 130/173 (75%), Gaps = 18/173 (10%)

Query: 2   VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
           V AGYDNGD+K+FDL+ MSL+WETN+KNGVCG++FDR+DI MNKLVAT+LEAK   FD++
Sbjct: 180 VAAGYDNGDIKLFDLRNMSLRWETNIKNGVCGLEFDRKDISMNKLVATSLEAKFHCFDMR 239

Query: 62  TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCS 121
           T H  KGFA +SEKAHK+TTVW A+HLPQNRD+F+T GG+GSL LW+             
Sbjct: 240 TQHPTKGFASVSEKAHKSTTVWGARHLPQNRDVFMTLGGNGSLYLWKY------------ 287

Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                 NYPTQR K D D   MGV G+L+LLQ  TLS+QPIN+LDWS DK GL
Sbjct: 288 ------NYPTQRVKQDEDKQDMGVAGTLSLLQNVTLSTQPINALDWSPDKEGL 334

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|242019997|ref|XP_002430444.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212515582|gb|EEB17706.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 108/174 (62%), Positives = 132/174 (75%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGDLKMF+LK M L WETNLKNGVCG++FDR+DIPMNKLVATTLE+K  +F+L
Sbjct: 179 VVCAGYDNGDLKMFNLKNMKLHWETNLKNGVCGIEFDRKDIPMNKLVATTLESKFHLFEL 238

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           KTLH +KGF  LSEKAHK +TVW  KHLPQNR++F+T GG+GSL LW+            
Sbjct: 239 KTLHSKKGFTSLSEKAHK-STVWTVKHLPQNREIFITTGGAGSLCLWKY----------- 286

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  NYP +R +PD D +P+GV G+LTLLQ  T+S+QPI+S +WS DKLGL
Sbjct: 287 -------NYPEKRVRPDGDGLPVGVVGNLTLLQNMTVSTQPISSFNWSPDKLGL 333

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322788169|gb|EFZ13951.1| hypothetical protein SINV_06071 [Solenopsis invicta]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/174 (61%), Positives = 130/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+KMFDL+ MSL+WE+NLKNGVCG++FDR+DIPMNKLVATTLE+K ++FDL
Sbjct: 182 VVAAGYDNGDVKMFDLRAMSLRWESNLKNGVCGLEFDRKDIPMNKLVATTLESKFYLFDL 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           KT H +KGFAYL EKAHK +TVW  KHLPQNR+LF TCGG G++ LW+            
Sbjct: 242 KTQHPKKGFAYLVEKAHK-STVWLVKHLPQNRELFATCGGGGTICLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  NYP +R   D D I  GV G+++LLQ  TLS+QPI+SLDWS DK GL
Sbjct: 290 -------NYPEKRKTTDADGIEQGVTGNVSLLQNCTLSTQPISSLDWSPDKQGL 336

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156352990|ref|XP_001622863.1| predicted protein [Nematostella vectensis] gi|156209489|gb|EDO30763.1| predicted protein [Nematostella vectensis]

 Score =  221 bits (564), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 107/173 (61%), Positives = 131/173 (75%), Gaps = 19/173 (10%)

Query: 2   VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
           VVAGYDNGD+KMFDLK M+L+WETN+KNGVCG++FDR+DI MNKLVATTLE+K  V+DL+
Sbjct: 181 VVAGYDNGDIKMFDLKKMALRWETNVKNGVCGLEFDRKDIMMNKLVATTLESKFHVYDLR 240

Query: 62  TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCS 121
           T H EKGFA ++EKAHK +TVW  +HLPQNRD+F+TCGG+GS+NLW              
Sbjct: 241 TQHPEKGFASVTEKAHK-STVWCCRHLPQNRDVFMTCGGNGSVNLW-------------- 285

Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
             +YS  YP +R++ D D + MGV GS+  LQ AT SSQPI S DWS DK GL
Sbjct: 286 --KYS--YPVKRSEKDSDGVEMGVAGSVMQLQNATFSSQPIGSFDWSPDKAGL 334

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|332027634|gb|EGI67702.1| WD repeat-containing protein 92 [Acromyrmex echinatior]

 Score =  221 bits (563), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 129/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+KMFDL+ MSL+WE+NLKNGVCG++FDR+DIPMNKLV TTLE+K ++FDL
Sbjct: 182 IVAAGYDNGDVKMFDLRAMSLRWESNLKNGVCGLEFDRKDIPMNKLVVTTLESKFYLFDL 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           KT H +KGFAYL EKAHK +TVW  KHLPQNR+LF TCGG G++ LW+            
Sbjct: 242 KTQHPKKGFAYLVEKAHK-STVWLVKHLPQNRELFATCGGGGTICLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  NYP +R   D D I  G+ G+++LLQ  TLSSQPI+SLDWS DK GL
Sbjct: 290 -------NYPEKRKVTDADGIEQGIMGNISLLQNCTLSSQPISSLDWSPDKQGL 336

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|224046999|ref|XP_002197387.1| PREDICTED: WD repeat-containing protein 92 [Taeniopygia guttata]

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 129/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+K+FDLKTMSL+WETN+KNGVC V+FDR+DI MNKLVAT+LE K  VFD+
Sbjct: 185 VVCAGYDNGDIKLFDLKTMSLRWETNIKNGVCSVEFDRKDINMNKLVATSLEGKFHVFDM 244

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           +T H  KGFAY+SEKA K +T+W  +HLPQNRD+F+T GGSGSL+LW+            
Sbjct: 245 RTQHPTKGFAYVSEKAQK-STIWQVRHLPQNRDIFMTSGGSGSLHLWKY----------- 292

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                   YP QR+K D +   MGV GSL+LLQ  TLS+QPI+SLDWS DK GL
Sbjct: 293 -------EYPAQRSKKDSEGCEMGVAGSLSLLQNVTLSTQPISSLDWSPDKTGL 339

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|66508641|ref|XP_623878.1| PREDICTED: WD repeat-containing protein 92-like [Apis mellifera]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 129/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+KMFDLK M+L WE+NLKNGVC ++FDR+DIPMNKLVATTLE+K ++FDL
Sbjct: 182 IVAAGYDNGDIKMFDLKAMALLWESNLKNGVCSIEFDRKDIPMNKLVATTLESKFYLFDL 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           KT H +KGF+YL+EKAH  +TVW  +HLPQNR++FVTCGG G+L LW+            
Sbjct: 242 KTQHPKKGFSYLTEKAHN-STVWLVRHLPQNREIFVTCGGGGNLCLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  NYP +R   D D I  GV G+LTLLQ  T+SSQP++SLDWS DK GL
Sbjct: 290 -------NYPEKRKIVDTDGIDQGVVGNLTLLQNITVSSQPVSSLDWSPDKQGL 336

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024895|ref|XP_003696224.1| PREDICTED: WD repeat-containing protein 92-like [Apis florea]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 129/174 (74%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+KMFDLK M+L WE+NLKNGVC ++FDR+DIPMNKLVATTLE+K ++FDL
Sbjct: 182 IVAAGYDNGDIKMFDLKAMALLWESNLKNGVCSIEFDRKDIPMNKLVATTLESKFYLFDL 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           KT H +KGF+YL+EKAH  +TVW  +HLPQNR++FVTCGG G+L LW+            
Sbjct: 242 KTQHPKKGFSYLTEKAHN-STVWLVRHLPQNREIFVTCGGGGNLCLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  NYP +R   D D I  GV G+LTLLQ  T+SSQP++SLDWS DK GL
Sbjct: 290 -------NYPEKRKIVDKDGIDQGVVGNLTLLQNITVSSQPVSSLDWSPDKQGL 336

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713853|ref|XP_003395449.1| PREDICTED: WD repeat-containing protein 92-like [Bombus terrestris]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/174 (59%), Positives = 128/174 (73%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+KMFDLK M++ WE+NLKNGVC ++FDR+DIPMNKLVATTLE+K ++FDL
Sbjct: 182 VVAAGYDNGDVKMFDLKAMAVLWESNLKNGVCSIEFDRKDIPMNKLVATTLESKFYLFDL 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           KT H +KGF YL+EKAH A TVW  +HLPQNR++FVTCGG GSL LW+            
Sbjct: 242 KTQHPKKGFTYLTEKAHNA-TVWLVRHLPQNREIFVTCGGGGSLCLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  NYP +R   D+D I  G+ G+LTLLQ   +SSQP++SLDWS DK GL
Sbjct: 290 -------NYPEKRKIVDVDGIDRGIVGNLTLLQNTIVSSQPVSSLDWSPDKQGL 336

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409625|ref|XP_003488797.1| PREDICTED: WD repeat-containing protein 92-like [Bombus impatiens]

 Score =  216 bits (551), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/174 (60%), Positives = 127/174 (72%), Gaps = 19/174 (10%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+KMFDLK M++ WE+NLKNGVC ++FDR+DIPMNKLVATTLE+K ++FDL
Sbjct: 182 VVAAGYDNGDVKMFDLKAMAVLWESNLKNGVCSIEFDRKDIPMNKLVATTLESKFYLFDL 241

Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           KT H +KGF YL+EKAH A TVW  +HLPQNR++FVTCGG GSL LW+            
Sbjct: 242 KTQHPKKGFTYLTEKAHNA-TVWLVRHLPQNREIFVTCGGGGSLCLWKY----------- 289

Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  NYP +R   D+D I  GV G LTLLQ   +SSQP++SLDWS DK GL
Sbjct: 290 -------NYPEKRKIVDVDGIGRGVIGDLTLLQNTIVSSQPVSSLDWSPDKQGL 336

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
UNIPROTKB|Q29RZ9	357	WDR92 "WD repeat-containing pr	0.614	0.299	0.666	8.7e-53
MGI|MGI:2144224	357	Wdr92 "WD repeat domain 92" [M	0.614	0.299	0.657	8.7e-53
ZFIN|ZDB-GENE-050417-93	358	wdr92 "WD repeat domain 92" [D	0.609	0.296	0.654	1.8e-52
UNIPROTKB|Q96MX6	357	WDR92 "WD repeat-containing pr	0.614	0.299	0.657	2.3e-52
UNIPROTKB|F1PZ86	686	WDR92 "Uncharacterized protein	0.614	0.155	0.675	4.7e-52
UNIPROTKB|F1SJ04	668	LOC100515478 "Uncharacterized	0.614	0.160	0.666	1.6e-51
RGD|1563863	357	Wdr92 "WD repeat domain 92" [R	0.614	0.299	0.657	2e-51
DICTYBASE|DDB_G0291822	357	wdr92 "WD40 repeat-containing	0.609	0.296	0.247	5.1e-12

UNIPROTKB|Q29RZ9 WDR92 "WD repeat-containing protein 92" [Bos taurus (taxid:9913)]

 Score = 410 (149.4 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 72/108 (66%), Positives = 93/108 (86%)

Query:     1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
             +V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct:   182 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241

Query:    61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108
             +T H  KGFA +SEKAHK+T VW  +HLPQNR++F+T GG+GSL+LW+
Sbjct:   242 RTQHPTKGFASVSEKAHKST-VWQVRHLPQNREVFLTAGGAGSLHLWK 288

GO:0006915 "apoptotic process" evidence=IEA

MGI|MGI:2144224 Wdr92 "WD repeat domain 92" [Mus musculus (taxid:10090)]

 Score = 407 (148.3 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
 Identities = 71/108 (65%), Positives = 93/108 (86%)

Query:     1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
             +V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct:   182 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241

Query:    61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108
             +T H  KGFA ++EKAHK+T VW  +HLPQNR++F+T GG+GSL+LW+
Sbjct:   242 RTQHPTKGFASVTEKAHKST-VWQVRHLPQNREIFLTTGGAGSLHLWK 288

GO:0005575 "cellular_component" evidence=ND

GO:0006915 "apoptotic process" evidence=IEA

GO:0034968 "histone lysine methylation" evidence=ISO

GO:0035064 "methylated histone residue binding" evidence=ISO

ZFIN|ZDB-GENE-050417-93 wdr92 "WD repeat domain 92" [Danio rerio (taxid:7955)]

 Score = 403 (146.9 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
 Identities = 70/107 (65%), Positives = 91/107 (85%)

Query:     2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
             V AGYDNGD+K+FDL+ MSL+WE N++NGVC V+FDR+DI MNKLVAT+LE K  VFD++
Sbjct:   184 VCAGYDNGDIKLFDLRNMSLRWEKNIRNGVCSVEFDRKDINMNKLVATSLEGKFHVFDMR 243

Query:    62 TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108
             T H  KGFA +SEKAHK+T +W  +HLPQNRD+F+T GG+G+L+LW+
Sbjct:   244 TQHPSKGFASVSEKAHKST-IWQVRHLPQNRDVFMTAGGAGNLHLWK 289

GO:0005575 "cellular_component" evidence=ND

GO:0006915 "apoptotic process" evidence=IEA

UNIPROTKB|Q96MX6 WDR92 "WD repeat-containing protein 92" [Homo sapiens (taxid:9606)]

 Score = 406 (148.0 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
 Identities = 71/108 (65%), Positives = 92/108 (85%)

Query:     1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
             +V AGYDNGD+K+FDL+ M+L+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct:   182 VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241

Query:    61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108
             +T H  KGFA +SEKAHK+T VW  +HLPQNR+LF+T GG+G L+LW+
Sbjct:   242 RTQHPTKGFASVSEKAHKST-VWQVRHLPQNRELFLTAGGAGGLHLWK 288

GO:0006915 "apoptotic process" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IDA

GO:0034968 "histone lysine methylation" evidence=IDA

UNIPROTKB|F1PZ86 WDR92 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 413 (150.4 bits), Expect = 4.7e-52, Sum P(2) = 4.7e-52
 Identities = 73/108 (67%), Positives = 93/108 (86%)

Query:     1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
             +V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct:   511 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 570

Query:    61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108
             +T H  KGFA +SEKAHK+T VW  +HLPQNR+LF+T GG+GSL+LW+
Sbjct:   571 RTQHPTKGFASVSEKAHKST-VWQVRHLPQNRELFLTAGGTGSLHLWK 617

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1SJ04 LOC100515478 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 409 (149.0 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
 Identities = 72/108 (66%), Positives = 92/108 (85%)

Query:     1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
             +V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct:   493 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 552

Query:    61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108
             +T H  KGFA +SEKAHK+T VW  +HLPQNR+LF+T GG+G L+LW+
Sbjct:   553 RTQHPTKGFASVSEKAHKST-VWQVRHLPQNRELFLTAGGAGGLHLWK 599

GO:0005509 "calcium ion binding" evidence=IEA

RGD|1563863 Wdr92 "WD repeat domain 92" [Rattus norvegicus (taxid:10116)]

 Score = 406 (148.0 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
 Identities = 71/108 (65%), Positives = 93/108 (86%)

Query:     1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
             +V AGYDNGD+K+FDL+ MSL+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct:   182 VVCAGYDNGDIKLFDLRNMSLRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241

Query:    61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ 108
             +T H  KGFA ++EKAHK+T VW  +HLPQNR+LF+T GG+G+L+LW+
Sbjct:   242 RTQHPTKGFASVTEKAHKST-VWQVRHLPQNRELFLTTGGAGNLHLWK 288

GO:0034968 "histone lysine methylation" evidence=ISO

GO:0035064 "methylated histone residue binding" evidence=ISO

DICTYBASE|DDB_G0291822 wdr92 "WD40 repeat-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 136 (52.9 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
 Identities = 28/113 (24%), Positives = 61/113 (53%)

Query:     2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
             ++AG++NGDL +++LKT S++  T L  G+C +D + R   +N+ + TT ++ + +    
Sbjct:   201 IIAGFENGDLNIYNLKTNSIQSTTKLNGGICSIDSNDRSNILNQFLITTNKSFISIASFN 260

Query:    62 TLHREKGFAYLSEKAHKAT--TVWAAKHLPQNR----DLFVTCGGSGSLNLWQ 108
               +      +     +K    T+W+  + P N+    ++F    G GS+++++
Sbjct:   261 N-NNNNNIEFKDYDINKEPNQTIWSGIYSPWNKKDNENIFTIAQGDGSVSMYR 312

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96MX6	WDR92_HUMAN	No assigned EC number	0.5804	0.8908	0.4341	yes	N/A
A4QNE6	WDR92_XENTR	No assigned EC number	0.5689	0.8908	0.4329	yes	N/A
Q8BGF3	WDR92_MOUSE	No assigned EC number	0.5747	0.8908	0.4341	yes	N/A
Q29RZ9	WDR92_BOVIN	No assigned EC number	0.5747	0.8908	0.4341	yes	N/A
Q561Y0	WDR92_DANRE	No assigned EC number	0.5780	0.8850	0.4301	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	174
cd10276	358	cd10276, BamB_YfgL, Beta-barrel assembly machinery	0.003

>gnl|CDD|199834 cd10276, BamB_YfgL, Beta-barrel assembly machinery (Bam) complex component B and related proteins

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 16/72 (22%)

Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLK-------NGVCGVDFDRRDIPMNKLVATTLEA 53
           MV A   NG +  F+  T  + WET+L            G           K+   T   
Sbjct: 40  MVYAADANGQVSAFNATTGKIIWETSLSGKGFLGGTPAVGNG---------KIFVGTESG 90

Query: 54  KLFVFDLKTLHR 65
            L+  D K    
Sbjct: 91  YLYALDAKDGSE 102

BamB (YflG) is a non-essential component of the beta-barrel assembly machinery (Bam), a multi-subunit complex that inserts proteins with beta-barrel topology into the outer membrane. BamB has been found to interact with BamA, which in turn binds and stabilizes pre-folded beta-barrel proteins; it has been suggested that BamB participates in the stabilization. Length = 358

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	174
KOG0264|consensus	422		99.94
KOG0272|consensus	459		99.92
KOG0302|consensus	440		99.92
KOG0279|consensus	315		99.9
KOG0272|consensus	459		99.89
KOG0315|consensus	311		99.88
KOG0263|consensus	707		99.88
KOG0286|consensus	343		99.88
KOG0279|consensus	315		99.87
KOG0271|consensus	480		99.87
KOG0271|consensus	480		99.86
KOG0266|consensus	456		99.86
KOG0263|consensus	707		99.86
KOG0264|consensus	422		99.86
KOG0277|consensus	311		99.85
KOG0315|consensus	311		99.85
KOG0285|consensus	460		99.85
KOG0273|consensus	524		99.84
KOG0291|consensus	893		99.84
KOG0266|consensus	456		99.84
KOG0284|consensus	464		99.84
PTZ00421	493	coronin; Provisional	99.83
KOG0319|consensus	775		99.83
KOG0284|consensus	464		99.83
KOG0285|consensus	460		99.82
KOG0319|consensus	775		99.82
KOG0277|consensus	311		99.82
KOG0273|consensus	524		99.81
KOG0313|consensus	423		99.81
KOG0645|consensus	312		99.81
KOG0643|consensus	327		99.81
KOG0286|consensus	343		99.8
PTZ00421	493	coronin; Provisional	99.8
KOG4283|consensus	397		99.79
KOG0276|consensus	794		99.79
KOG0291|consensus	893		99.79
KOG0265|consensus	338		99.79
PTZ00420	568	coronin; Provisional	99.79
KOG0295|consensus	406		99.79
PTZ00420	568	coronin; Provisional	99.78
KOG0269|consensus	839		99.78
PLN00181	793	protein SPA1-RELATED; Provisional	99.76
KOG0305|consensus	484		99.76
KOG0283|consensus	712		99.76
PLN00181	793	protein SPA1-RELATED; Provisional	99.76
KOG1007|consensus	370		99.75
KOG0288|consensus	459		99.75
KOG0270|consensus	463		99.75
KOG0265|consensus	338		99.75
KOG0318|consensus	603		99.74
KOG0269|consensus	839		99.74
KOG0276|consensus	794		99.74
KOG0281|consensus	499		99.74
KOG0295|consensus	406		99.74
KOG0267|consensus	825		99.73
KOG0282|consensus	503		99.73
KOG0282|consensus	503		99.73
KOG0278|consensus	334		99.73
KOG0274|consensus	537		99.73
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.72
KOG1407|consensus	313		99.72
KOG0292|consensus	1202		99.71
KOG0310|consensus	487		99.71
KOG0289|consensus	506		99.71
KOG0275|consensus	508		99.7
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.7
KOG0302|consensus	440		99.7
KOG0316|consensus	307		99.69
KOG0275|consensus	508		99.69
KOG0308|consensus	735		99.68
KOG0281|consensus	499		99.68
KOG0647|consensus	347		99.67
KOG0313|consensus	423		99.67
KOG0647|consensus	347		99.67
KOG0296|consensus	399		99.67
KOG1036|consensus	323		99.64
KOG0306|consensus	888		99.63
KOG0310|consensus	487		99.63
KOG0274|consensus	537		99.63
KOG0645|consensus	312		99.62
KOG0772|consensus	641		99.62
KOG0641|consensus	350		99.61
KOG0267|consensus	825		99.61
KOG0283|consensus	712		99.61
KOG0268|consensus	433		99.61
KOG0292|consensus	1202		99.6
KOG1332|consensus	299		99.6
KOG1188|consensus	376		99.59
KOG0305|consensus	484		99.58
KOG4283|consensus	397		99.58
KOG0318|consensus	603		99.57
KOG0316|consensus	307		99.57
KOG0301|consensus	745		99.56
KOG0293|consensus	519		99.56
KOG0296|consensus	399		99.56
KOG1407|consensus	313		99.56
KOG0306|consensus	888		99.56
KOG0289|consensus	506		99.55
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.55
KOG0290|consensus	364		99.54
KOG0772|consensus	641		99.54
KOG0303|consensus	472		99.54
KOG1445|consensus	1012		99.54
KOG1446|consensus	311		99.54
KOG1332|consensus	299		99.53
KOG0973|consensus	942		99.53
KOG1446|consensus	311		99.53
KOG0294|consensus	362		99.52
KOG0640|consensus	430		99.52
KOG0301|consensus	745		99.52
KOG0307|consensus	1049		99.52
KOG2096|consensus	420		99.51
KOG4328|consensus	498		99.51
KOG0973|consensus	942		99.5
KOG0299|consensus	479		99.5
KOG0307|consensus	1049		99.5
KOG0278|consensus	334		99.49
KOG1034|consensus	385		99.49
KOG0300|consensus	481		99.48
KOG0293|consensus	519		99.47
KOG0322|consensus	323		99.47
KOG0290|consensus	364		99.47
KOG1539|consensus	910		99.47
KOG0308|consensus	735		99.47
KOG0270|consensus	463		99.47
KOG0640|consensus	430		99.46
KOG0643|consensus	327		99.46
KOG0303|consensus	472		99.46
KOG1007|consensus	370		99.45
KOG1445|consensus	1012		99.45
KOG0300|consensus	481		99.44
KOG0639|consensus	705		99.44
KOG0646|consensus	476		99.44
KOG0294|consensus	362		99.42
KOG1273|consensus	405		99.42
KOG4378|consensus	673		99.41
KOG0268|consensus	433		99.4
KOG1009|consensus	434		99.4
KOG2048|consensus	691		99.38
KOG1036|consensus	323		99.38
KOG0321|consensus	720		99.38
KOG4378|consensus	673		99.38
KOG0646|consensus	476		99.38
KOG2445|consensus	361		99.37
KOG0639|consensus	705		99.36
KOG1274|consensus	933		99.35
KOG2096|consensus	420		99.34
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.33
KOG4328|consensus	498		99.33
KOG1188|consensus	376		99.32
KOG0771|consensus	398		99.32
KOG2106|consensus	626		99.31
KOG2445|consensus	361		99.31
KOG1408|consensus	1080		99.3
KOG1524|consensus	737		99.3
KOG1009|consensus	434		99.3
KOG2055|consensus	514		99.29
KOG0321|consensus	720		99.29
KOG0641|consensus	350		99.27
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.25
KOG2110|consensus	391		99.25
KOG0642|consensus	577		99.25
KOG0299|consensus	479		99.22
KOG2106|consensus	626		99.21
KOG1274|consensus	933		99.21
KOG1034|consensus	385		99.18
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.17
KOG1063|consensus	764		99.16
KOG0650|consensus	733		99.16
COG2319	466	FOG: WD40 repeat [General function prediction only	99.16
COG2319	466	FOG: WD40 repeat [General function prediction only	99.15
KOG2110|consensus	391		99.13
KOG1063|consensus	764		99.11
KOG0288|consensus	459		99.11
KOG0642|consensus	577		99.1
KOG2394|consensus	636		99.08
KOG1273|consensus	405		99.07
KOG1539|consensus	910		99.07
PRK01742	429	tolB translocation protein TolB; Provisional	99.07
KOG2919|consensus	406		99.06
KOG1517|consensus	1387		99.06
KOG2111|consensus	346		99.04
KOG0644|consensus	1113		99.02
KOG4714|consensus	319		99.01
KOG1587|consensus	555		99.01
KOG0644|consensus	1113		98.99
KOG1523|consensus	361		98.99
KOG2055|consensus	514		98.97
KOG0974|consensus	967		98.96
KOG1272|consensus	545		98.95
KOG1272|consensus	545		98.94
KOG0974|consensus	967		98.93
KOG2919|consensus	406		98.93
KOG1310|consensus	758		98.93
KOG1408|consensus	1080		98.92
KOG1517|consensus	1387		98.9
PRK01742	429	tolB translocation protein TolB; Provisional	98.9
KOG2048|consensus	691		98.9
KOG4227|consensus	609		98.89
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.89
PRK05137	435	tolB translocation protein TolB; Provisional	98.88
KOG0649|consensus	325		98.86
KOG1310|consensus	758		98.84
PRK02889	427	tolB translocation protein TolB; Provisional	98.82
KOG0322|consensus	323		98.81
KOG0280|consensus	339		98.81
KOG1538|consensus	1081		98.8
KOG2394|consensus	636		98.8
PRK04922	433	tolB translocation protein TolB; Provisional	98.79
KOG1587|consensus	555		98.77
KOG4227|consensus	609		98.77
PRK11028	330	6-phosphogluconolactonase; Provisional	98.76
PRK05137	435	tolB translocation protein TolB; Provisional	98.75
KOG4547|consensus	541		98.74
KOG3914|consensus	390		98.74
KOG2111|consensus	346		98.73
PRK11028	330	6-phosphogluconolactonase; Provisional	98.72
KOG0649|consensus	325		98.7
KOG2321|consensus	703		98.69
PRK03629	429	tolB translocation protein TolB; Provisional	98.67
KOG0280|consensus	339		98.66
KOG2321|consensus	703		98.64
KOG0650|consensus	733		98.63
PRK02889	427	tolB translocation protein TolB; Provisional	98.62
KOG1538|consensus	1081		98.62
KOG3881|consensus	412		98.6
PRK04922	433	tolB translocation protein TolB; Provisional	98.6
KOG1963|consensus	792		98.59
KOG1240|consensus	1431		98.59
PRK03629	429	tolB translocation protein TolB; Provisional	98.58
KOG1523|consensus	361		98.58
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.57
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.57
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.54
KOG4497|consensus	447		98.53
PRK00178	430	tolB translocation protein TolB; Provisional	98.51
KOG0309|consensus	1081		98.47
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.47
KOG3881|consensus	412		98.45
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.43
KOG2695|consensus	425		98.43
PRK04792	448	tolB translocation protein TolB; Provisional	98.43
KOG2139|consensus	445		98.43
KOG0771|consensus	398		98.42
KOG4532|consensus	344		98.33
PRK04792	448	tolB translocation protein TolB; Provisional	98.32
KOG1524|consensus	737		98.3
KOG1240|consensus	1431		98.24
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.22
PRK00178	430	tolB translocation protein TolB; Provisional	98.2
KOG1963|consensus	792		98.2
KOG1334|consensus	559		98.16
KOG4547|consensus	541		98.12
KOG1064|consensus	2439		98.11
KOG2139|consensus	445		98.1
PRK01029	428	tolB translocation protein TolB; Provisional	98.04
KOG2695|consensus	425		98.04
KOG1064|consensus	2439		97.94
KOG4714|consensus	319		97.89
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.89
KOG4497|consensus	447		97.88
KOG0309|consensus	1081		97.88
KOG2315|consensus	566		97.84
PRK01029	428	tolB translocation protein TolB; Provisional	97.84
KOG1334|consensus	559		97.84
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	97.82
KOG2315|consensus	566		97.74
KOG1409|consensus	404		97.68
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.67
KOG1354|consensus	433		97.6
KOG2066|consensus	846		97.53
KOG1645|consensus	463		97.53
COG4946	668	Uncharacterized protein related to the periplasmic	97.51
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.51
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.49
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.48
KOG1275|consensus	1118		97.44
KOG1354|consensus	433		97.42
PRK04043	419	tolB translocation protein TolB; Provisional	97.4
KOG4190|consensus	1034		97.38
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.35
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.33
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.32
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.32
KOG1409|consensus	404		97.31
KOG4532|consensus	344		97.28
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	97.25
KOG3914|consensus	390		97.23
KOG1275|consensus	1118		97.08
KOG4190|consensus	1034		97.04
KOG1645|consensus	463		96.99
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	96.96
KOG3621|consensus	726		96.96
KOG2041|consensus	1189		96.96
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	96.92
PRK04043	419	tolB translocation protein TolB; Provisional	96.91
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	96.91
KOG2041|consensus	1189		96.9
KOG2079|consensus	1206		96.86
KOG2066|consensus	846		96.77
KOG1008|consensus	783		96.75
KOG1912|consensus	1062		96.68
COG4946	668	Uncharacterized protein related to the periplasmic	96.66
KOG2314|consensus	698		96.57
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	96.5
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.47
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	96.45
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.38
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	96.28
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	96.24
KOG4640|consensus	665		96.21
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	96.19
KOG4640|consensus	665		96.18
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.13
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	96.11
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	96.1
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	95.94
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	95.93
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	95.86
KOG2444|consensus	238		95.7
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	95.67
KOG1008|consensus	783		95.58
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	95.57
KOG1912|consensus	1062		95.51
KOG3617|consensus	1416		95.48
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	95.44
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	95.08
KOG2314|consensus	698		94.98
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	94.91
KOG0882|consensus	558		94.82
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	94.8
KOG3621|consensus	726		94.78
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.73
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	94.72
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.52
KOG2114|consensus	933		94.25
PRK02888	635	nitrous-oxide reductase; Validated	94.0
KOG2395|consensus	644		93.9
PRK02888	635	nitrous-oxide reductase; Validated	93.89
KOG2114|consensus	933		93.86
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	93.79
COG3391	381	Uncharacterized conserved protein [Function unknow	93.73
KOG2079|consensus	1206		93.73
KOG1832|consensus	1516		93.61
KOG1920|consensus	1265		93.46
KOG1832|consensus	1516		93.43
KOG3617|consensus	1416		93.43
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	93.0
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	92.08
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	91.83
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	91.44
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	91.31
KOG2395|consensus	644		91.17
KOG4649|consensus	354		91.17
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	90.87
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	90.57
KOG1916|consensus	1283		90.1
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	89.48
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	89.15
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	88.92
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	88.51
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	88.19
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	87.93
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	87.9
KOG0882|consensus	558		87.77
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	87.68
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	87.61
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	87.49
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	87.0
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	86.6
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	86.51
KOG1916|consensus	1283		85.36
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	84.64
KOG2377|consensus	657		84.63
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	84.62
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	84.1
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	83.87
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	82.82
KOG4649|consensus	354		82.59
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	82.49
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	81.33
COG5167	776	VID27 Protein involved in vacuole import and degra	80.3

>KOG0264|consensus

Probab=99.94  E-value=5.1e-26  Score=187.09  Aligned_cols=142  Identities=18%  Similarity=0.307  Sum_probs=115.5

Q ss_pred             CEEEEecCCcEEEEECCCC--CeEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTM--SLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~--~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +++++++|+.+.|||+|++  +... ...|...|++++|+|.+  ...|||||.|++|+|||+|+...    .++++.+|
T Consensus       242 lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~--~~ilAT~S~D~tV~LwDlRnL~~----~lh~~e~H  315 (422)
T KOG0264|consen  242 LFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFN--EFILATGSADKTVALWDLRNLNK----PLHTFEGH  315 (422)
T ss_pred             hheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCC--CceEEeccCCCcEEEeechhccc----CceeccCC
Confidence            4689999999999999963  3322 24578899999999985  58899999999999999998652    46778899


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. +|..|.|+|....+|||++.|+++.+||+.             +.+..++   ....+||+       -+|+++|.|
T Consensus       316 ~d-ev~~V~WSPh~etvLASSg~D~rl~vWDls-------------~ig~eq~---~eda~dgp-------pEllF~HgG  371 (422)
T KOG0264|consen  316 ED-EVFQVEWSPHNETVLASSGTDRRLNVWDLS-------------RIGEEQS---PEDAEDGP-------PELLFIHGG  371 (422)
T ss_pred             Cc-ceEEEEeCCCCCceeEecccCCcEEEEecc-------------ccccccC---hhhhccCC-------cceeEEecC
Confidence            99 999999999999999999999999999991             2222221   11114554       379999999


Q ss_pred             cccceeeeeeCCCCC
Q psy6415         158 SSQPINSLDWSADKL  172 (174)
Q Consensus       158 h~~~V~~l~~spd~~  172 (174)
                      |+..|.+++|+|+.+
T Consensus       372 H~~kV~DfsWnp~eP  386 (422)
T KOG0264|consen  372 HTAKVSDFSWNPNEP  386 (422)
T ss_pred             cccccccccCCCCCC
Confidence            999999999999875

>KOG0272|consensus

Probab=99.92  E-value=2.1e-25  Score=182.65  Aligned_cols=127  Identities=20%  Similarity=0.218  Sum_probs=113.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +++||+.|..-+|||+|+|.++..+ .|...|.+|+|+|++   ..|||||.|+++||||+|...+     ++++.+|.+
T Consensus       317 L~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNG---y~lATgs~Dnt~kVWDLR~r~~-----ly~ipAH~n  388 (459)
T KOG0272|consen  317 LAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNG---YHLATGSSDNTCKVWDLRMRSE-----LYTIPAHSN  388 (459)
T ss_pred             eeeccCccchhheeecccCcEEEEecccccceeeEeECCCc---eEEeecCCCCcEEEeeeccccc-----ceecccccc
Confidence            4789999999999999999998765 477899999999974   8999999999999999998654     456789999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|..|.|+|..+..|+|||.|++++||.-                             .        +..++.++.||+
T Consensus       389 -lVS~Vk~~p~~g~fL~TasyD~t~kiWs~-----------------------------~--------~~~~~ksLaGHe  430 (459)
T KOG0272|consen  389 -LVSQVKYSPQEGYFLVTASYDNTVKIWST-----------------------------R--------TWSPLKSLAGHE  430 (459)
T ss_pred             -hhhheEecccCCeEEEEcccCcceeeecC-----------------------------C--------CcccchhhcCCc
Confidence             99999999988899999999999999988                             1        134789999999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|.++++|||++-
T Consensus       431 ~kV~s~Dis~d~~~  444 (459)
T KOG0272|consen  431 GKVISLDISPDSQA  444 (459)
T ss_pred             cceEEEEeccCCce
Confidence            99999999999864

>KOG0302|consensus

Probab=99.92  E-value=3.6e-24  Score=173.60  Aligned_cols=149  Identities=16%  Similarity=0.299  Sum_probs=115.4

Q ss_pred             CEEEEecCCcEEEEECCCC---CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTM---SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~---~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      ++||||.||+|+|||+|.+   .++....|...|+.|+||.+.   ..||+|++||+++|||+|+.+.-  .++.+++-|
T Consensus       272 vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~---~lLasG~DdGt~~iwDLR~~~~~--~pVA~fk~H  346 (440)
T KOG0302|consen  272 VFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRRE---PLLASGGDDGTLSIWDLRQFKSG--QPVATFKYH  346 (440)
T ss_pred             eEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCc---ceeeecCCCceEEEEEhhhccCC--CcceeEEec
Confidence            5899999999999999998   456667788899999999874   58999999999999999986532  234567789


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. +|.+|.|+|....+||++|.|.+|.|||+  +++++++....             ....| -..  -.-+|||.|.|
T Consensus       347 k~-pItsieW~p~e~s~iaasg~D~QitiWDl--svE~D~ee~~~-------------~a~~~-L~d--lPpQLLFVHqG  407 (440)
T KOG0302|consen  347 KA-PITSIEWHPHEDSVIAASGEDNQITIWDL--SVEADEEEIDQ-------------EAAEG-LQD--LPPQLLFVHQG  407 (440)
T ss_pred             cC-CeeEEEeccccCceEEeccCCCcEEEEEe--eccCChhhhcc-------------ccccc-hhc--CCceeEEEecc
Confidence            99 99999999998899999999999999999  44433210000             00011 000  01258898877


Q ss_pred             cccceeeeeeCCCCCCC
Q psy6415         158 SSQPINSLDWSADKLGL  174 (174)
Q Consensus       158 h~~~V~~l~~spd~~~~  174 (174)
                       ++.|..+.|+|+.+|+
T Consensus       408 -Qke~KevhWH~QiPG~  423 (440)
T KOG0302|consen  408 -QKEVKEVHWHRQIPGL  423 (440)
T ss_pred             -hhHhhhheeccCCCCe
Confidence             6889999999999885

>KOG0279|consensus

Probab=99.90  E-value=4.5e-23  Score=161.82  Aligned_cols=127  Identities=17%  Similarity=0.281  Sum_probs=105.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +.+||+.|+++++||+.+++.... ..|...|.+|+|+|+.   .+|+|||.|++|++||+-...   .+... ...|.+
T Consensus        77 ~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn---~qivSGSrDkTiklwnt~g~c---k~t~~-~~~~~~  149 (315)
T KOG0279|consen   77 FALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDN---RQIVSGSRDKTIKLWNTLGVC---KYTIH-EDSHRE  149 (315)
T ss_pred             eEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCC---ceeecCCCcceeeeeeecccE---EEEEe-cCCCcC
Confidence            357999999999999999876554 4688899999999975   789999999999999987642   11111 123366


Q ss_pred             CcEEEEEEcCCC-CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          80 TTVWAAKHLPQN-RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        80 ~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                       .|.+|+|+|.. ..+|+++|.|++||+||+                             +        ++++.++|.||
T Consensus       150 -WVscvrfsP~~~~p~Ivs~s~DktvKvWnl-----------------------------~--------~~~l~~~~~gh  191 (315)
T KOG0279|consen  150 -WVSCVRFSPNESNPIIVSASWDKTVKVWNL-----------------------------R--------NCQLRTTFIGH  191 (315)
T ss_pred             -cEEEEEEcCCCCCcEEEEccCCceEEEEcc-----------------------------C--------Ccchhhccccc
Confidence             99999999963 569999999999999999                             2        25789999999


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      +.-|+.+.+||||.
T Consensus       192 ~~~v~t~~vSpDGs  205 (315)
T KOG0279|consen  192 SGYVNTVTVSPDGS  205 (315)
T ss_pred             cccEEEEEECCCCC
Confidence            99999999999984

>KOG0272|consensus

Probab=99.89  E-value=4.5e-23  Score=168.99  Aligned_cols=164  Identities=15%  Similarity=0.108  Sum_probs=127.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|||||.+|.+|+|...+...+.. ..|...|.++.|+|.. +...||||+.||+||||++.+.+++     ..+.+|..
T Consensus       189 ~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~-~~~~lat~s~Dgtvklw~~~~e~~l-----~~l~gH~~  262 (459)
T KOG0272|consen  189 HLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVD-SDLNLATASADGTVKLWKLSQETPL-----QDLEGHLA  262 (459)
T ss_pred             eEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCC-CccceeeeccCCceeeeccCCCcch-----hhhhcchh
Confidence            489999999999999988876665 4578899999999973 2467999999999999999986543     45679998


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc-ccccccceeeeecCC-CCCCcccC--CC--CCccccccccceee
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR-ADTNLCSIFRYSSNY-PTQRTKPD--ID--DIPMGVPGSLTLLQ  153 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~--~d--g~~~~~~~~~~ll~  153 (174)
                       .|-.|+||| ++.+|+|+|.|.+=+|||+++..+ +..+++++-.++.+| |+++-+..  .|  | ++=..-++.-+.
T Consensus       263 -RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~-RvWDlRtgr~im  339 (459)
T KOG0272|consen  263 -RVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLG-RVWDLRTGRCIM  339 (459)
T ss_pred             -hheeeeecC-CCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchh-heeecccCcEEE
Confidence             999999999 577999999999999999976444 444567776676677 65543322  11  1 000013346688


Q ss_pred             eeeccccceeeeeeCCCCCC
Q psy6415         154 EATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       154 ~~~~h~~~V~~l~~spd~~~  173 (174)
                      .|.||..+|.+++|||+|.-
T Consensus       340 ~L~gH~k~I~~V~fsPNGy~  359 (459)
T KOG0272|consen  340 FLAGHIKEILSVAFSPNGYH  359 (459)
T ss_pred             EecccccceeeEeECCCceE
Confidence            99999999999999999853

>KOG0315|consensus

Probab=99.88  E-value=4.4e-22  Score=154.50  Aligned_cols=132  Identities=20%  Similarity=0.280  Sum_probs=108.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc-------------
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG-------------   68 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~-------------   68 (174)
                      +.||++||++||||+|.-.+...+.+...|++|..+|+   +..|++|..+|.|++||+++..+.+.             
T Consensus        98 MyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpn---QteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~  174 (311)
T KOG0315|consen   98 MYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPN---QTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLT  174 (311)
T ss_pred             EEecCCCceEEEEeccCcccchhccCCCCcceEEecCC---cceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEE
Confidence            68999999999999999877777778899999999996   46899999999999999997632111             


Q ss_pred             -------------------------------eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc
Q psy6415          69 -------------------------------FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT  117 (174)
Q Consensus        69 -------------------------------~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~  117 (174)
                                                     .++..+++|+. -|..+.||| +..+|||||.|.+|+||+.        
T Consensus       175 v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~-~il~C~lSP-d~k~lat~ssdktv~iwn~--------  244 (311)
T KOG0315|consen  175 VMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNG-HILRCLLSP-DVKYLATCSSDKTVKIWNT--------  244 (311)
T ss_pred             EcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccc-eEEEEEECC-CCcEEEeecCCceEEEEec--------
Confidence                                           01223567888 899999999 5679999999999999999        


Q ss_pred             cccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         118 NLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                                           |+       ..++-..++||+.+|++.+||.||+.|
T Consensus       245 ---------------------~~-------~~kle~~l~gh~rWvWdc~FS~dg~Yl  273 (311)
T KOG0315|consen  245 ---------------------DD-------FFKLELVLTGHQRWVWDCAFSADGEYL  273 (311)
T ss_pred             ---------------------CC-------ceeeEEEeecCCceEEeeeeccCccEE
Confidence                                 32       124567789999999999999999754

>KOG0263|consensus

Probab=99.88  E-value=3.4e-22  Score=173.38  Aligned_cols=127  Identities=15%  Similarity=0.176  Sum_probs=110.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|+++|+|++||||.+++..+.... .|..+|+.|+|+|.+   .++||||.|++.++|......+++     .+.+|-+
T Consensus       465 fLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G---yYFatas~D~tArLWs~d~~~PlR-----ifaghls  536 (707)
T KOG0263|consen  465 FLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG---YYFATASHDQTARLWSTDHNKPLR-----IFAGHLS  536 (707)
T ss_pred             ceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCc---eEEEecCCCceeeeeecccCCchh-----hhccccc
Confidence            5899999999999999999876553 577889999999985   899999999999999998766544     4469999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.+|+||| +..++||||.|.+|++||+                            ..         +.-++.|.||.
T Consensus       537 -DV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv----------------------------~~---------G~~VRiF~GH~  577 (707)
T KOG0263|consen  537 -DVDCVSFHP-NSNYVATGSSDRTVRLWDV----------------------------ST---------GNSVRIFTGHK  577 (707)
T ss_pred             -ccceEEECC-cccccccCCCCceEEEEEc----------------------------CC---------CcEEEEecCCC
Confidence             999999999 6789999999999999999                            12         23478889999


Q ss_pred             cceeeeeeCCCCCCC
Q psy6415         160 QPINSLDWSADKLGL  174 (174)
Q Consensus       160 ~~V~~l~~spd~~~~  174 (174)
                      .||.+|+|||+|+.|
T Consensus       578 ~~V~al~~Sp~Gr~L  592 (707)
T KOG0263|consen  578 GPVTALAFSPCGRYL  592 (707)
T ss_pred             CceEEEEEcCCCceE
Confidence            999999999999765

>KOG0286|consensus

Probab=99.88  E-value=1.8e-21  Score=153.75  Aligned_cols=159  Identities=16%  Similarity=0.201  Sum_probs=116.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .|+|||.|.+..+||+++++....+ .|...|.+++++|.  +++.+++|+-|++.+|||+|.+.+.+     ++.+|+.
T Consensus       158 ~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~--~~ntFvSg~cD~~aklWD~R~~~c~q-----tF~ghes  230 (343)
T KOG0286|consen  158 HILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPS--DGNTFVSGGCDKSAKLWDVRSGQCVQ-----TFEGHES  230 (343)
T ss_pred             ceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCC--CCCeEEecccccceeeeeccCcceeE-----eeccccc
Confidence            4889999999999999999987765 47788999999995  36999999999999999999987654     4569999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccc------ccceee-eecCC-CCCCcccC-CCCCcccc--ccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTN------LCSIFR-YSSNY-PTQRTKPD-IDDIPMGV--PGS  148 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~------~~~~~~-~~~~~-~~~~~~~~-~dg~~~~~--~~~  148 (174)
                       .|++|+|+| ++.-|||||.|+++++||+    |.+..      ...++- .+..| ..++.++. .+.-.+.+  .-.
T Consensus       231 -DINsv~ffP-~G~afatGSDD~tcRlyDl----RaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk  304 (343)
T KOG0286|consen  231 -DINSVRFFP-SGDAFATGSDDATCRLYDL----RADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLK  304 (343)
T ss_pred             -ccceEEEcc-CCCeeeecCCCceeEEEee----cCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccc
Confidence             999999999 5678999999999999999    43321      000000 01112 11222211 11111111  122


Q ss_pred             cceeeeeeccccceeeeeeCCCCC
Q psy6415         149 LTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       149 ~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      ++.+-.|.||+..|.+|..+|||-
T Consensus       305 ~e~vg~L~GHeNRvScl~~s~DG~  328 (343)
T KOG0286|consen  305 GERVGVLAGHENRVSCLGVSPDGM  328 (343)
T ss_pred             cceEEEeeccCCeeEEEEECCCCc
Confidence            356778899999999999999984

>KOG0279|consensus

Probab=99.87  E-value=1.6e-21  Score=153.17  Aligned_cols=126  Identities=18%  Similarity=0.257  Sum_probs=101.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|+|||.|.+|++||+.++........  .+-|.+|.|+|+. ....|+++|.|++||+||+++.+..+     ++.+|+
T Consensus       119 qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~-~~p~Ivs~s~DktvKvWnl~~~~l~~-----~~~gh~  192 (315)
T KOG0279|consen  119 QIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNE-SNPIIVSASWDKTVKVWNLRNCQLRT-----TFIGHS  192 (315)
T ss_pred             eeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCC-CCcEEEEccCCceEEEEccCCcchhh-----cccccc
Confidence            489999999999999976543322222  5679999999974 24689999999999999999976443     345999


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      . .++.+++|| |+.++|+|+.||.+.|||+    +                        +         .+-+.++ .|
T Consensus       193 ~-~v~t~~vSp-DGslcasGgkdg~~~LwdL----~------------------------~---------~k~lysl-~a  232 (315)
T KOG0279|consen  193 G-YVNTVTVSP-DGSLCASGGKDGEAMLWDL----N------------------------E---------GKNLYSL-EA  232 (315)
T ss_pred             c-cEEEEEECC-CCCEEecCCCCceEEEEEc----c------------------------C---------CceeEec-cC
Confidence            9 999999999 5779999999999999999    0                        2         2346666 67


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      ..+|++++|||+..
T Consensus       233 ~~~v~sl~fspnry  246 (315)
T KOG0279|consen  233 FDIVNSLCFSPNRY  246 (315)
T ss_pred             CCeEeeEEecCCce
Confidence            89999999999853

>KOG0271|consensus

Probab=99.87  E-value=1e-21  Score=159.77  Aligned_cols=126  Identities=20%  Similarity=0.280  Sum_probs=107.8

Q ss_pred             CEEEEecCCcEEEEECCCCC-eE-EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-LK-WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-~~-~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      .|+||++|.++.+|+....+ .+ ....|..-|+.|.|+|++   .++|++|-|+.|||||.++++.     +.++++|-
T Consensus       338 rlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~---r~IASaSFDkSVkLW~g~tGk~-----lasfRGHv  409 (480)
T KOG0271|consen  338 RLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDG---RYIASASFDKSVKLWDGRTGKF-----LASFRGHV  409 (480)
T ss_pred             eeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCc---cEEEEeecccceeeeeCCCcch-----hhhhhhcc
Confidence            38999999999999975443 33 335678889999999975   8999999999999999999764     44667999


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      + +|+.|+|+. |..+|+|||.|.++|+|++    |                                 +.+|.+.+.||
T Consensus       410 ~-~VYqvawsa-DsRLlVS~SkDsTLKvw~V----~---------------------------------tkKl~~DLpGh  450 (480)
T KOG0271|consen  410 A-AVYQVAWSA-DSRLLVSGSKDSTLKVWDV----R---------------------------------TKKLKQDLPGH  450 (480)
T ss_pred             c-eeEEEEecc-CccEEEEcCCCceEEEEEe----e---------------------------------eeeecccCCCC
Confidence            9 999999999 5679999999999999999    1                                 23578899999


Q ss_pred             ccceeeeeeCCCCCC
Q psy6415         159 SQPINSLDWSADKLG  173 (174)
Q Consensus       159 ~~~V~~l~~spd~~~  173 (174)
                      ...|..++|||||+-
T Consensus       451 ~DEVf~vDwspDG~r  465 (480)
T KOG0271|consen  451 ADEVFAVDWSPDGQR  465 (480)
T ss_pred             CceEEEEEecCCCce
Confidence            999999999999963

>KOG0271|consensus

Probab=99.86  E-value=1.8e-21  Score=158.40  Aligned_cols=126  Identities=17%  Similarity=0.275  Sum_probs=107.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .||||+.|.++++||+.+....++ ..|.+-|.+|+|+|++   ..||+|+.||+|++||..++++.    ...+.+|..
T Consensus       129 ~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDg---k~iASG~~dg~I~lwdpktg~~~----g~~l~gH~K  201 (480)
T KOG0271|consen  129 RLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDG---KKIASGSKDGSIRLWDPKTGQQI----GRALRGHKK  201 (480)
T ss_pred             eEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCc---chhhccccCCeEEEecCCCCCcc----cccccCccc
Confidence            389999999999999999887765 4588899999999985   89999999999999999987653    345679999


Q ss_pred             CcEEEEEEcCC----CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415          80 TTVWAAKHLPQ----NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA  155 (174)
Q Consensus        80 ~~i~~v~fsP~----~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~  155 (174)
                       .|.+++|.|-    ....|||+|.||+|+|||+                             .        .++.+..+
T Consensus       202 -~It~Lawep~hl~p~~r~las~skDg~vrIWd~-----------------------------~--------~~~~~~~l  243 (480)
T KOG0271|consen  202 -WITALAWEPLHLVPPCRRLASSSKDGSVRIWDT-----------------------------K--------LGTCVRTL  243 (480)
T ss_pred             -ceeEEeecccccCCCccceecccCCCCEEEEEc-----------------------------c--------CceEEEEe
Confidence             9999999874    2348999999999999999                             1        13468999


Q ss_pred             eccccceeeeeeCCCC
Q psy6415         156 TLSSQPINSLDWSADK  171 (174)
Q Consensus       156 ~~h~~~V~~l~~spd~  171 (174)
                      .||+++|.++.|--+|
T Consensus       244 sgHT~~VTCvrwGG~g  259 (480)
T KOG0271|consen  244 SGHTASVTCVRWGGEG  259 (480)
T ss_pred             ccCccceEEEEEcCCc
Confidence            9999999999997443

>KOG0266|consensus

Probab=99.86  E-value=8.4e-21  Score=162.51  Aligned_cols=99  Identities=22%  Similarity=0.352  Sum_probs=86.1

Q ss_pred             CEEEEecCCcEEEEECC-CCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLK-TMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~-~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|++|+.|++|||||++ .+.+...+ .|...|++++|+|.+   +.+++|+.|++|||||+++.++.     ..+.+|.
T Consensus       217 ~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g---~~i~Sgs~D~tvriWd~~~~~~~-----~~l~~hs  288 (456)
T KOG0266|consen  217 YLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG---NLLVSGSDDGTVRIWDVRTGECV-----RKLKGHS  288 (456)
T ss_pred             EEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCC---CEEEEecCCCcEEEEeccCCeEE-----EeeeccC
Confidence            48999999999999994 44555554 688899999999974   89999999999999999996654     4567999


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      + .|.+++|+| ++.+|++++.||.|++||+
T Consensus       289 ~-~is~~~f~~-d~~~l~s~s~d~~i~vwd~  317 (456)
T KOG0266|consen  289 D-GISGLAFSP-DGNLLVSASYDGTIRVWDL  317 (456)
T ss_pred             C-ceEEEEECC-CCCEEEEcCCCccEEEEEC
Confidence            9 999999999 5678999999999999999

>KOG0263|consensus

Probab=99.86  E-value=1.2e-21  Score=170.04  Aligned_cols=126  Identities=16%  Similarity=0.193  Sum_probs=108.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +.||||.|++-++|.......... ..|-+.|.+++|+|+.   ++++|||.|.+||+||+.++..++     .+.+|.+
T Consensus       507 YFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs---~Y~aTGSsD~tVRlWDv~~G~~VR-----iF~GH~~  578 (707)
T KOG0263|consen  507 YFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNS---NYVATGSSDRTVRLWDVSTGNSVR-----IFTGHKG  578 (707)
T ss_pred             EEEecCCCceeeeeecccCCchhhhcccccccceEEECCcc---cccccCCCCceEEEEEcCCCcEEE-----EecCCCC
Confidence            479999999999999876554433 4567889999999974   999999999999999999987654     4469999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       +|.+|+||| ++.+||||+.||.|+|||+                  .                   .++++..+.+|+
T Consensus       579 -~V~al~~Sp-~Gr~LaSg~ed~~I~iWDl------------------~-------------------~~~~v~~l~~Ht  619 (707)
T KOG0263|consen  579 -PVTALAFSP-CGRYLASGDEDGLIKIWDL------------------A-------------------NGSLVKQLKGHT  619 (707)
T ss_pred             -ceEEEEEcC-CCceEeecccCCcEEEEEc------------------C-------------------CCcchhhhhccc
Confidence             999999999 6779999999999999999                  1                   135788889999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      ..|.+|.||+||.-
T Consensus       620 ~ti~SlsFS~dg~v  633 (707)
T KOG0263|consen  620 GTIYSLSFSRDGNV  633 (707)
T ss_pred             CceeEEEEecCCCE
Confidence            99999999999853

>KOG0264|consensus

Probab=99.86  E-value=4.9e-21  Score=157.78  Aligned_cols=131  Identities=19%  Similarity=0.255  Sum_probs=107.2

Q ss_pred             CEEEEecCCcEEEEECCCCCe----E----EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL----K----WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~----~----~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      .|++|++|++|.+||++....    .    ....|...|..|+|++..  .+.++++++|+.+.|||+|+.+   ....+
T Consensus       192 ~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h--~~lF~sv~dd~~L~iwD~R~~~---~~~~~  266 (422)
T KOG0264|consen  192 TLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLH--EDLFGSVGDDGKLMIWDTRSNT---SKPSH  266 (422)
T ss_pred             eEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccc--hhhheeecCCCeEEEEEcCCCC---CCCcc
Confidence            378999999999999976543    1    123467889999999975  4778999999999999999621   11234


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccccee
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLL  152 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll  152 (174)
                      ...+|.+ +|++++|+|++..+|||||.|++|+|||+    | +                               ..+.+
T Consensus       267 ~~~ah~~-~vn~~~fnp~~~~ilAT~S~D~tV~LwDl----R-n-------------------------------L~~~l  309 (422)
T KOG0264|consen  267 SVKAHSA-EVNCVAFNPFNEFILATGSADKTVALWDL----R-N-------------------------------LNKPL  309 (422)
T ss_pred             cccccCC-ceeEEEeCCCCCceEEeccCCCcEEEeec----h-h-------------------------------cccCc
Confidence            5569999 99999999999999999999999999999    2 1                               12358


Q ss_pred             eeeeccccceeeeeeCCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~~  173 (174)
                      +++.+|...|..+.|||+...
T Consensus       310 h~~e~H~dev~~V~WSPh~et  330 (422)
T KOG0264|consen  310 HTFEGHEDEVFQVEWSPHNET  330 (422)
T ss_pred             eeccCCCcceEEEEeCCCCCc
Confidence            999999999999999998643

>KOG0277|consensus

Probab=99.85  E-value=1e-20  Score=147.21  Aligned_cols=127  Identities=15%  Similarity=0.199  Sum_probs=106.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++++|.|++|||||...++.+.++ .|...|+..+|+|..  ++.++++|.|++++|||+|..-    ..+ .+.+|.. 
T Consensus       120 ~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~--~nlfas~Sgd~~l~lwdvr~~g----k~~-~i~ah~~-  191 (311)
T KOG0277|consen  120 FLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHI--PNLFASASGDGTLRLWDVRSPG----KFM-SIEAHNS-  191 (311)
T ss_pred             EEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCC--CCeEEEccCCceEEEEEecCCC----cee-EEEeccc-
Confidence            567799999999998777766654 466789999999975  7999999999999999999752    122 3679998 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      +|.++.|+..+..++|||+.|+.|+.||+    | .                               ....++++.||.-
T Consensus       192 Eil~cdw~ky~~~vl~Tg~vd~~vr~wDi----r-~-------------------------------~r~pl~eL~gh~~  235 (311)
T KOG0277|consen  192 EILCCDWSKYNHNVLATGGVDNLVRGWDI----R-N-------------------------------LRTPLFELNGHGL  235 (311)
T ss_pred             eeEeecccccCCcEEEecCCCceEEEEeh----h-h-------------------------------ccccceeecCCce
Confidence            99999999999999999999999999999    1 0                               0135888999999


Q ss_pred             ceeeeeeCCCCC
Q psy6415         161 PINSLDWSADKL  172 (174)
Q Consensus       161 ~V~~l~~spd~~  172 (174)
                      .|+++.|||...
T Consensus       236 AVRkvk~Sph~~  247 (311)
T KOG0277|consen  236 AVRKVKFSPHHA  247 (311)
T ss_pred             EEEEEecCcchh
Confidence            999999999643

>KOG0315|consensus

Probab=99.85  E-value=2.1e-20  Score=145.19  Aligned_cols=154  Identities=16%  Similarity=0.185  Sum_probs=106.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecC--------------------------------------------CCEEEEEe
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLK--------------------------------------------NGVCGVDF   36 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~--------------------------------------------~~V~sv~f   36 (174)
                      +|||++.|.+||+|...+|.|..+..|.                                            ..|.+|.|
T Consensus        12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF   91 (311)
T KOG0315|consen   12 ILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGF   91 (311)
T ss_pred             EEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceEEEEE
Confidence            4788999999999988888765544332                                            33445555


Q ss_pred             cCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccc---c
Q psy6415          37 DRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSA---L  113 (174)
Q Consensus        37 ~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~---~  113 (174)
                      .-+   +.++.|||+||++||||+|...+.+.|      .|.. +|++|..|| ++.-|++|..+|.|++||+...   .
T Consensus        92 ~~d---grWMyTgseDgt~kIWdlR~~~~qR~~------~~~s-pVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c~~  160 (311)
T KOG0315|consen   92 QCD---GRWMYTGSEDGTVKIWDLRSLSCQRNY------QHNS-PVNTVVLHP-NQTELISGDQSGNIRVWDLGENSCTH  160 (311)
T ss_pred             eec---CeEEEecCCCceEEEEeccCcccchhc------cCCC-CcceEEecC-CcceEEeecCCCcEEEEEccCCcccc
Confidence            543   579999999999999999997765544      5777 999999999 5567889999999999999331   0


Q ss_pred             c-ccccccceeeeecCCCCCCcccCCCCCccc-cc----------------cccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         114 R-ADTNLCSIFRYSSNYPTQRTKPDIDDIPMG-VP----------------GSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       114 ~-~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~-~~----------------~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      + .++....+..+.         ..+||+++. ..                ...+.+..+..|+.-|.+.-||||++.|
T Consensus       161 ~liPe~~~~i~sl~---------v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~l  230 (311)
T KOG0315|consen  161 ELIPEDDTSIQSLT---------VMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYL  230 (311)
T ss_pred             ccCCCCCcceeeEE---------EcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEE
Confidence            0 111111111111         113443331 11                1225688899999999999999999865

>KOG0285|consensus

Probab=99.85  E-value=1.4e-20  Score=152.18  Aligned_cols=157  Identities=19%  Similarity=0.231  Sum_probs=114.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|.++++|++||.||+...+.+.. ..|-.+|++++.+|..   +.|+||+.|.++||||+|+..     .++++.+|..
T Consensus       207 YlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTl---dvl~t~grDst~RvWDiRtr~-----~V~~l~GH~~  278 (460)
T KOG0285|consen  207 YLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTL---DVLVTGGRDSTIRVWDIRTRA-----SVHVLSGHTN  278 (460)
T ss_pred             eEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccc---eeEEecCCcceEEEeeecccc-----eEEEecCCCC
Confidence            578999999999999999887765 3567899999999964   889999999999999999964     3567789999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccccc-----ce-eeeecCCCCCCcccC--CCCCccccccccce
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC-----SI-FRYSSNYPTQRTKPD--IDDIPMGVPGSLTL  151 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~--~dg~~~~~~~~~~l  151 (174)
                       +|.+|.+.|.+++ ++|||.|++|+|||+    |.++-.+     ++ -++..-.|.+...+.  .|-...--...+++
T Consensus       279 -~V~~V~~~~~dpq-vit~S~D~tvrlWDl----~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f  352 (460)
T KOG0285|consen  279 -PVASVMCQPTDPQ-VITGSHDSTVRLWDL----RAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEF  352 (460)
T ss_pred             -cceeEEeecCCCc-eEEecCCceEEEeee----ccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccch
Confidence             9999999998876 589999999999999    3222111     11 111111122221111  11000000123468


Q ss_pred             eeeeeccccceeeeeeCCCC
Q psy6415         152 LQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       152 l~~~~~h~~~V~~l~~spd~  171 (174)
                      ++.+.+|..-|+.|+-+.|+
T Consensus       353 ~~nlsgh~~iintl~~nsD~  372 (460)
T KOG0285|consen  353 LQNLSGHNAIINTLSVNSDG  372 (460)
T ss_pred             hhccccccceeeeeeeccCc
Confidence            88999999999999998886

>KOG0273|consensus

Probab=99.84  E-value=3e-20  Score=154.25  Aligned_cols=167  Identities=15%  Similarity=0.286  Sum_probs=117.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce-----------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF-----------   69 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~-----------   69 (174)
                      +||+|+.||.++||+..+........|+.+|.+|.|+..+   ++|++++-|+++-|||.-+++.-+.|           
T Consensus       249 ~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G---~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVd  325 (524)
T KOG0273|consen  249 LLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKG---TYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVD  325 (524)
T ss_pred             eEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCC---CEEEeccCCccEEEEeccCceEEEeeeeccCCccceE
Confidence            4899999999999999876655555688999999999974   99999999999999999665311110           


Q ss_pred             -------------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccc---ccccccccc
Q psy6415          70 -------------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSA---LRADTNLCS  121 (174)
Q Consensus        70 -------------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~---~~~~~~~~~  121 (174)
                                               +..++.+|.+ +|+.+.|+|. +.+|+|||.|+++|||....+   ++++  +++
T Consensus       326 W~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g-~V~alk~n~t-g~LLaS~SdD~TlkiWs~~~~~~~~~l~--~Hs  401 (524)
T KOG0273|consen  326 WQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHG-EVNALKWNPT-GSLLASCSDDGTLKIWSMGQSNSVHDLQ--AHS  401 (524)
T ss_pred             EecCceEeecCCCceEEEEEecCCCcceeeecccC-ceEEEEECCC-CceEEEecCCCeeEeeecCCCcchhhhh--hhc
Confidence                                     1234568999 9999999995 679999999999999997210   0011  112


Q ss_pred             eeeeecCC-CCCCcccC-CCCCcccc-----------ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         122 IFRYSSNY-PTQRTKPD-IDDIPMGV-----------PGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       122 ~~~~~~~~-~~~~~~~~-~dg~~~~~-----------~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      +-.|...+ |++-..-+ .+|.++..           +..+..+++|..|+.||.+|+|||||+.|
T Consensus       402 kei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~yl  467 (524)
T KOG0273|consen  402 KEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYL  467 (524)
T ss_pred             cceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEE
Confidence            11223333 43321111 11111111           24456799999999999999999999754

>KOG0291|consensus

Probab=99.84  E-value=2.9e-20  Score=161.27  Aligned_cols=104  Identities=19%  Similarity=0.357  Sum_probs=87.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK------------   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~------------   67 (174)
                      +||||++||.|||||.+++-|..++ .|..+|+.+.|+..   ++.++++|.||+||.||+....+-+            
T Consensus       364 ~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~---g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Qfsc  440 (893)
T KOG0291|consen  364 LIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR---GNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSC  440 (893)
T ss_pred             EEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEec---CCEEEEeecCCeEEeeeecccceeeeecCCCceeeeE
Confidence            4899999999999999999998776 47899999999986   4899999999999999987542111            


Q ss_pred             ---------------------------ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          68 ---------------------------GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        68 ---------------------------~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                                                 +..+-.+.+|++ +|.+++|+| .+.+|||+|.|.+||+||+
T Consensus       441 vavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEg-PVs~l~f~~-~~~~LaS~SWDkTVRiW~i  507 (893)
T KOG0291|consen  441 VAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEG-PVSGLSFSP-DGSLLASGSWDKTVRIWDI  507 (893)
T ss_pred             EEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCC-cceeeEEcc-ccCeEEeccccceEEEEEe
Confidence                                       111223568999 999999999 4679999999999999999

>KOG0266|consensus

Probab=99.84  E-value=4e-20  Score=158.38  Aligned_cols=127  Identities=22%  Similarity=0.355  Sum_probs=107.6

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      .|++++.|+.+++|++.+..  +... ..|...|++++|+|++   ..+++++.|++|||||+...    ...+.++++|
T Consensus       173 ~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~---~~l~s~s~D~tiriwd~~~~----~~~~~~l~gH  245 (456)
T KOG0266|consen  173 ALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDG---SYLLSGSDDKTLRIWDLKDD----GRNLKTLKGH  245 (456)
T ss_pred             eEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCC---cEEEEecCCceEEEeeccCC----CeEEEEecCC
Confidence            37899999999999996665  4333 3577889999999974   79999999999999999442    2245677899


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|++++|+|++ +++++|+.|++|+|||+                             .        +++++..+.+
T Consensus       246 ~~-~v~~~~f~p~g-~~i~Sgs~D~tvriWd~-----------------------------~--------~~~~~~~l~~  286 (456)
T KOG0266|consen  246 ST-YVTSVAFSPDG-NLLVSGSDDGTVRIWDV-----------------------------R--------TGECVRKLKG  286 (456)
T ss_pred             CC-ceEEEEecCCC-CEEEEecCCCcEEEEec-----------------------------c--------CCeEEEeeec
Confidence            99 99999999976 89999999999999999                             1        2467899999


Q ss_pred             cccceeeeeeCCCCCC
Q psy6415         158 SSQPINSLDWSADKLG  173 (174)
Q Consensus       158 h~~~V~~l~~spd~~~  173 (174)
                      |+.+|..++|+||+.-
T Consensus       287 hs~~is~~~f~~d~~~  302 (456)
T KOG0266|consen  287 HSDGISGLAFSPDGNL  302 (456)
T ss_pred             cCCceEEEEECCCCCE
Confidence            9999999999999863

>KOG0284|consensus

Probab=99.84  E-value=4.7e-21  Score=156.76  Aligned_cols=128  Identities=23%  Similarity=0.299  Sum_probs=107.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.|..||+||.|+++|+.+. .|++.|..+.|+|++   ++|+|+|.|..+|++|+|+.+.+     .+.++|+.
T Consensus       236 LiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~---N~Llt~skD~~~kv~DiR~mkEl-----~~~r~Hkk  307 (464)
T KOG0284|consen  236 LIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNG---NWLLTGSKDQSCKVFDIRTMKEL-----FTYRGHKK  307 (464)
T ss_pred             eeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCC---CeeEEccCCceEEEEehhHhHHH-----HHhhcchh
Confidence            5899999999999999999998764 478999999999974   99999999999999999975543     34569999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|+++.|||-...+|++|+.||.|..|.+-    .            .+                    .+...=.+|.
T Consensus       308 -dv~~~~WhP~~~~lftsgg~Dgsvvh~~v~----~------------~~--------------------p~~~i~~AHd  350 (464)
T KOG0284|consen  308 -DVTSLTWHPLNESLFTSGGSDGSVVHWVVG----L------------EE--------------------PLGEIPPAHD  350 (464)
T ss_pred             -hheeeccccccccceeeccCCCceEEEecc----c------------cc--------------------cccCCCcccc
Confidence             999999999999999999999999999990    0            00                    1122225799


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      ..|+||+|+|=|.-
T Consensus       351 ~~iwsl~~hPlGhi  364 (464)
T KOG0284|consen  351 GEIWSLAYHPLGHI  364 (464)
T ss_pred             cceeeeecccccee
Confidence            99999999997753

>PTZ00421 coronin; Provisional

Probab=99.83  E-value=1.7e-19  Score=155.60  Aligned_cols=100  Identities=16%  Similarity=0.167  Sum_probs=83.7

Q ss_pred             CEEEEecCCcEEEEECCCCCe-------EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-------KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-------~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      +||+|+.||+|+|||+.++..       +.. ..|...|.+|+|+|.+  .+.|++|+.|++|+|||+++.+.     ..
T Consensus        90 ~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~--~~iLaSgs~DgtVrIWDl~tg~~-----~~  162 (493)
T PTZ00421         90 KLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA--MNVLASAGADMVVNVWDVERGKA-----VE  162 (493)
T ss_pred             EEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC--CCEEEEEeCCCEEEEEECCCCeE-----EE
Confidence            489999999999999976531       222 3467889999999964  36899999999999999998653     33


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.+|.. .|++++|+| ++.+||+|+.||+|+|||+
T Consensus       163 ~l~~h~~-~V~sla~sp-dG~lLatgs~Dg~IrIwD~  197 (493)
T PTZ00421        163 VIKCHSD-QITSLEWNL-DGSLLCTTSKDKKLNIIDP  197 (493)
T ss_pred             EEcCCCC-ceEEEEEEC-CCCEEEEecCCCEEEEEEC
Confidence            5568988 999999999 5679999999999999999

>KOG0319|consensus

Probab=99.83  E-value=1.6e-20  Score=162.29  Aligned_cols=125  Identities=16%  Similarity=0.313  Sum_probs=103.3

Q ss_pred             CEEEEecCCcEEEEECCCCC-----eEE-----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-----LKW-----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-----~~~-----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~   70 (174)
                      +++++|.|.++|+|++...+     ...     ...|...|++|+.+|++   ..|||||.|++.|||++.+..     .
T Consensus       426 ffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~nd---kLiAT~SqDktaKiW~le~~~-----l  497 (775)
T KOG0319|consen  426 FFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPND---KLIATGSQDKTAKIWDLEQLR-----L  497 (775)
T ss_pred             EEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCC---ceEEecccccceeeecccCce-----E
Confidence            47999999999999997622     111     12466789999999985   789999999999999999543     3


Q ss_pred             eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccc
Q psy6415          71 YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT  150 (174)
Q Consensus        71 ~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~  150 (174)
                      ..++.+|.. .||+|+|+|. .+++||||.|++||||.++                            +         ..
T Consensus       498 ~~vLsGH~R-Gvw~V~Fs~~-dq~laT~SgD~TvKIW~is----------------------------~---------fS  538 (775)
T KOG0319|consen  498 LGVLSGHTR-GVWCVSFSKN-DQLLATCSGDKTVKIWSIS----------------------------T---------FS  538 (775)
T ss_pred             EEEeeCCcc-ceEEEEeccc-cceeEeccCCceEEEEEec----------------------------c---------ce
Confidence            567889999 9999999994 5699999999999999991                            2         23


Q ss_pred             eeeeeeccccceeeeeeCCCCC
Q psy6415         151 LLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       151 ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      .+.+|+||+..|....|=.+|+
T Consensus       539 ClkT~eGH~~aVlra~F~~~~~  560 (775)
T KOG0319|consen  539 CLKTFEGHTSAVLRASFIRNGK  560 (775)
T ss_pred             eeeeecCccceeEeeeeeeCCc
Confidence            6899999999999999977764

>KOG0284|consensus

Probab=99.83  E-value=2.2e-20  Score=152.90  Aligned_cols=126  Identities=18%  Similarity=0.251  Sum_probs=107.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++|+|+||+|||||.+..+.... ..|.-.|.+++|+|.   ...||+||.|+.||+||.|+++|+.     ++.+|+. 
T Consensus       195 F~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~---kgLiasgskDnlVKlWDprSg~cl~-----tlh~HKn-  265 (464)
T KOG0284|consen  195 FLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT---KGLIASGSKDNLVKLWDPRSGSCLA-----TLHGHKN-  265 (464)
T ss_pred             eEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCc---cceeEEccCCceeEeecCCCcchhh-----hhhhccc-
Confidence            68999999999999876654333 456778999999996   3789999999999999999988754     4458999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|..+.|+|+ +++|+|+|.|..++++|+    |                                 +++.++++.+|..
T Consensus       266 tVl~~~f~~n-~N~Llt~skD~~~kv~Di----R---------------------------------~mkEl~~~r~Hkk  307 (464)
T KOG0284|consen  266 TVLAVKFNPN-GNWLLTGSKDQSCKVFDI----R---------------------------------TMKELFTYRGHKK  307 (464)
T ss_pred             eEEEEEEcCC-CCeeEEccCCceEEEEeh----h---------------------------------HhHHHHHhhcchh
Confidence            9999999995 589999999999999999    1                                 2456899999999


Q ss_pred             ceeeeeeCCCCCCC
Q psy6415         161 PINSLDWSADKLGL  174 (174)
Q Consensus       161 ~V~~l~~spd~~~~  174 (174)
                      .|+++.|+|=.++|
T Consensus       308 dv~~~~WhP~~~~l  321 (464)
T KOG0284|consen  308 DVTSLTWHPLNESL  321 (464)
T ss_pred             hheeeccccccccc
Confidence            99999999966554

>KOG0285|consensus

Probab=99.82  E-value=1e-19  Score=147.27  Aligned_cols=122  Identities=20%  Similarity=0.347  Sum_probs=106.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .++||+.|++|||||+.+|++..+.. |...|..|++++..   .+|.++++|++||-||+...+.++.|     .+|-.
T Consensus       165 wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rH---pYlFs~gedk~VKCwDLe~nkvIR~Y-----hGHlS  236 (460)
T KOG0285|consen  165 WFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRH---PYLFSAGEDKQVKCWDLEYNKVIRHY-----HGHLS  236 (460)
T ss_pred             eEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccC---ceEEEecCCCeeEEEechhhhhHHHh-----ccccc
Confidence            47999999999999999999987765 77889999999864   78999999999999999987766554     38988


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++.+|. -.+|+||+.|.++++||+    |+                                 ..-++.+.||+
T Consensus       237 -~V~~L~lhPT-ldvl~t~grDst~RvWDi----Rt---------------------------------r~~V~~l~GH~  277 (460)
T KOG0285|consen  237 -GVYCLDLHPT-LDVLVTGGRDSTIRVWDI----RT---------------------------------RASVHVLSGHT  277 (460)
T ss_pred             -eeEEEecccc-ceeEEecCCcceEEEeee----cc---------------------------------cceEEEecCCC
Confidence             9999999995 468999999999999999    21                                 12489999999


Q ss_pred             cceeeeeeCC
Q psy6415         160 QPINSLDWSA  169 (174)
Q Consensus       160 ~~V~~l~~sp  169 (174)
                      .+|.++.+.|
T Consensus       278 ~~V~~V~~~~  287 (460)
T KOG0285|consen  278 NPVASVMCQP  287 (460)
T ss_pred             CcceeEEeec
Confidence            9999999987

>KOG0319|consensus

Probab=99.82  E-value=1.1e-19  Score=157.26  Aligned_cols=125  Identities=18%  Similarity=0.306  Sum_probs=108.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|||||.|.+.|||++....+... .+|..+|.+|.|+|.+   +.+||+|.|+|||||.+.+.+|.+     ++.+|..
T Consensus       477 LiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~d---q~laT~SgD~TvKIW~is~fSClk-----T~eGH~~  548 (775)
T KOG0319|consen  477 LIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKND---QLLATCSGDKTVKIWSISTFSCLK-----TFEGHTS  548 (775)
T ss_pred             eEEecccccceeeecccCceEEEEeeCCccceEEEEecccc---ceeEeccCCceEEEEEeccceeee-----eecCccc
Confidence            589999999999999997766655 4588999999999976   789999999999999999998764     5579999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|..++|-. ++..|+||+.||-||||++.                                     +.+.+.++.+|.
T Consensus       549 -aVlra~F~~-~~~qliS~~adGliKlWnik-------------------------------------t~eC~~tlD~H~  589 (775)
T KOG0319|consen  549 -AVLRASFIR-NGKQLISAGADGLIKLWNIK-------------------------------------TNECEMTLDAHN  589 (775)
T ss_pred             -eeEeeeeee-CCcEEEeccCCCcEEEEecc-------------------------------------chhhhhhhhhcc
Confidence             999999998 45678999999999999991                                     234688999999


Q ss_pred             cceeeeeeCCCCC
Q psy6415         160 QPINSLDWSADKL  172 (174)
Q Consensus       160 ~~V~~l~~spd~~  172 (174)
                      ..|+.|+-+|+..
T Consensus       590 DrvWaL~~~~~~~  602 (775)
T KOG0319|consen  590 DRVWALSVSPLLD  602 (775)
T ss_pred             ceeEEEeecCccc
Confidence            9999999998753

>KOG0277|consensus

Probab=99.82  E-value=1e-19  Score=141.73  Aligned_cols=127  Identities=22%  Similarity=0.428  Sum_probs=101.4

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      .+++++.||+++|||+.-..  +.....|+.+|.+++|++..  ...++++|.|++|||||...++.     +.++.+|.
T Consensus        75 ~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~--r~~~ltsSWD~TiKLW~~~r~~S-----v~Tf~gh~  147 (311)
T KOG0277|consen   75 QVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVR--RRIFLTSSWDGTIKLWDPNRPNS-----VQTFNGHN  147 (311)
T ss_pred             eEEEEecCceEEEeccCCCCcchhHHHhhhhheEEecccccc--ceeEEeeccCCceEeecCCCCcc-----eEeecCCc
Confidence            37889999999999964322  22234578999999999863  56788999999999999887654     34567999


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      . .|+..+|||..+++||++|+||+.+|||+    |.                       -|         +.+. ++.|
T Consensus       148 ~-~Iy~a~~sp~~~nlfas~Sgd~~l~lwdv----r~-----------------------~g---------k~~~-i~ah  189 (311)
T KOG0277|consen  148 S-CIYQAAFSPHIPNLFASASGDGTLRLWDV----RS-----------------------PG---------KFMS-IEAH  189 (311)
T ss_pred             c-EEEEEecCCCCCCeEEEccCCceEEEEEe----cC-----------------------CC---------ceeE-EEec
Confidence            9 99999999999999999999999999999    11                       12         3333 7888


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      ...|.+.+||.-.+
T Consensus       190 ~~Eil~cdw~ky~~  203 (311)
T KOG0277|consen  190 NSEILCCDWSKYNH  203 (311)
T ss_pred             cceeEeecccccCC
Confidence            88999999987543

>KOG0273|consensus

Probab=99.81  E-value=2e-19  Score=149.36  Aligned_cols=127  Identities=13%  Similarity=0.242  Sum_probs=103.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCC------CCCEEEEEeCCCcEEEEECCCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDI------PMNKLVATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~------~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +|+|+|+|+|+|||......+... ..|...|+.+.|+|.+.      .+..|++++.|++|++||+..+.++     ++
T Consensus       373 LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i-----~~  447 (524)
T KOG0273|consen  373 LLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPI-----HT  447 (524)
T ss_pred             eEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCcee-----Ee
Confidence            589999999999999876665544 34677899999998763      2447999999999999999987654     45


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceee
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQ  153 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~  153 (174)
                      +..|+. +|++|+|+| ++.++|+|+.||.|.+|+.                                     .++++.+
T Consensus       448 f~kH~~-pVysvafS~-~g~ylAsGs~dg~V~iws~-------------------------------------~~~~l~~  488 (524)
T KOG0273|consen  448 LMKHQE-PVYSVAFSP-NGRYLASGSLDGCVHIWST-------------------------------------KTGKLVK  488 (524)
T ss_pred             eccCCC-ceEEEEecC-CCcEEEecCCCCeeEeccc-------------------------------------cchheeE
Confidence            568999 999999999 6779999999999999999                                     1245677


Q ss_pred             eeeccccceeeeeeCCCCC
Q psy6415         154 EATLSSQPINSLDWSADKL  172 (174)
Q Consensus       154 ~~~~h~~~V~~l~~spd~~  172 (174)
                      ++.+ ...|..|.||.+|.
T Consensus       489 s~~~-~~~Ifel~Wn~~G~  506 (524)
T KOG0273|consen  489 SYQG-TGGIFELCWNAAGD  506 (524)
T ss_pred             eecC-CCeEEEEEEcCCCC
Confidence            7755 45688888888764

>KOG0313|consensus

Probab=99.81  E-value=2e-19  Score=146.11  Aligned_cols=126  Identities=19%  Similarity=0.260  Sum_probs=108.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +.|+|.|.+||.||+.++.+.........+++|+.+|.   .+.||+||.|..|||||.|++.-  ....+++.+|++ .
T Consensus       274 ~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~---~~Ll~~gssdr~irl~DPR~~~g--s~v~~s~~gH~n-w  347 (423)
T KOG0313|consen  274 IYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPL---SKLLASGSSDRHIRLWDPRTGDG--SVVSQSLIGHKN-W  347 (423)
T ss_pred             eEeecccceEEEEEeecccceeeeecCcceeEeecccc---cceeeecCCCCceeecCCCCCCC--ceeEEeeecchh-h
Confidence            67999999999999999998877766788999999996   37899999999999999998742  233456789999 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccc
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQP  161 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~  161 (174)
                      |.+|.|+|.+..+|+|++.|++++|||+    |..                      .          -.|..+.+|..+
T Consensus       348 Vssvkwsp~~~~~~~S~S~D~t~klWDv----RS~----------------------k----------~plydI~~h~DK  391 (423)
T KOG0313|consen  348 VSSVKWSPTNEFQLVSGSYDNTVKLWDV----RST----------------------K----------APLYDIAGHNDK  391 (423)
T ss_pred             hhheecCCCCceEEEEEecCCeEEEEEe----ccC----------------------C----------CcceeeccCCce
Confidence            9999999999999999999999999999    211                      1          147888999999


Q ss_pred             eeeeeeCC
Q psy6415         162 INSLDWSA  169 (174)
Q Consensus       162 V~~l~~sp  169 (174)
                      |.+++|+.
T Consensus       392 vl~vdW~~  399 (423)
T KOG0313|consen  392 VLSVDWNE  399 (423)
T ss_pred             EEEEeccC
Confidence            99999984

>KOG0645|consensus

Probab=99.81  E-value=1.4e-18  Score=136.29  Aligned_cols=159  Identities=13%  Similarity=0.183  Sum_probs=113.2

Q ss_pred             CEEEEecCCcEEEEECCCCC---eEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS---LKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~---~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      +||||+.|..|+||++..+.   +...+  .|+..|++|||+|.+   ++||+||.|.++-||--...+-   ..+.+++
T Consensus        29 ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g---~~La~aSFD~t~~Iw~k~~~ef---ecv~~lE  102 (312)
T KOG0645|consen   29 ILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHG---RYLASASFDATVVIWKKEDGEF---ECVATLE  102 (312)
T ss_pred             EEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCC---cEEEEeeccceEEEeecCCCce---eEEeeee
Confidence            48999999999999998532   33222  477889999999975   8999999999999998765432   1245778


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc--ccc----cccc----------ccceeeeecCC-CCCCcccCC
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS--ALR----ADTN----------LCSIFRYSSNY-PTQRTKPDI  138 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~--~~~----~~~~----------~~~~~~~~~~~-~~~~~~~~~  138 (174)
                      +|.. +|-+|+||+ ++.+|||||.|++|-||.+..  .++    +++.          +..-+-.+.+| -+-+.+.++
T Consensus       103 GHEn-EVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~  180 (312)
T KOG0645|consen  103 GHEN-EVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDE  180 (312)
T ss_pred             cccc-ceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeec
Confidence            9999 999999999 578999999999999999831  000    1111          11111123334 111222222


Q ss_pred             CCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         139 DDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       139 dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      ++      ..-++++++.+|+..|++++|+|.|.-
T Consensus       181 ~d------ddW~c~~tl~g~~~TVW~~~F~~~G~r  209 (312)
T KOG0645|consen  181 DD------DDWECVQTLDGHENTVWSLAFDNIGSR  209 (312)
T ss_pred             CC------CCeeEEEEecCccceEEEEEecCCCce
Confidence            11      124689999999999999999998854

>KOG0643|consensus

Probab=99.81  E-value=4.4e-19  Score=138.96  Aligned_cols=164  Identities=14%  Similarity=0.113  Sum_probs=113.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCC---------------------------------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDI---------------------------------------   41 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~---------------------------------------   41 (174)
                      .|+||+.|.++||||+.+|+++........|..+.|++.+.                                       
T Consensus        66 ~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t  145 (327)
T KOG0643|consen   66 HLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPT  145 (327)
T ss_pred             eeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecC
Confidence            37899999999999999999887766667777777777652                                       


Q ss_pred             ------------CCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          42 ------------PMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        42 ------------~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                                  -+..|++|.+||.|.+||++++..    .+...+.|+. .|+.++|+| +..+|+|+|.|.+-+|||+
T Consensus       146 ~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~----~v~s~~~h~~-~Ind~q~s~-d~T~FiT~s~Dttakl~D~  219 (327)
T KOG0643|consen  146 PDSKITSALWGPLGETIIAGHEDGSISIYDARTGKE----LVDSDEEHSS-KINDLQFSR-DRTYFITGSKDTTAKLVDV  219 (327)
T ss_pred             CccceeeeeecccCCEEEEecCCCcEEEEEcccCce----eeechhhhcc-ccccccccC-CcceEEecccCccceeeec
Confidence                        134789999999999999998642    2334457888 999999999 6789999999999999999


Q ss_pred             cc-----ccccccccc----------ceeeeecCCCCCCcccC---CCCCcccc---ccccceeeeeeccccceeeeeeC
Q psy6415         110 VS-----ALRADTNLC----------SIFRYSSNYPTQRTKPD---IDDIPMGV---PGSLTLLQEATLSSQPINSLDWS  168 (174)
Q Consensus       110 ~~-----~~~~~~~~~----------~~~~~~~~~~~~~~~~~---~dg~~~~~---~~~~~ll~~~~~h~~~V~~l~~s  168 (174)
                      .+     ..+.+.|.+          -++..+++   .+.+-.   ..|+.++-   .-..|.+-...||=.|||+++||
T Consensus       220 ~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqe---A~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfh  296 (327)
T KOG0643|consen  220 RTLEVLKTYTTERPVNTAAISPLLDHVILGGGQE---AMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFH  296 (327)
T ss_pred             cceeeEEEeeecccccceecccccceEEecCCce---eeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEEC
Confidence            55     111111110          01111111   111100   11222110   11125677889999999999999


Q ss_pred             CCCCC
Q psy6415         169 ADKLG  173 (174)
Q Consensus       169 pd~~~  173 (174)
                      |||+.
T Consensus       297 PdGks  301 (327)
T KOG0643|consen  297 PDGKS  301 (327)
T ss_pred             CCCcc
Confidence            99975

>KOG0286|consensus

Probab=99.80  E-value=1.7e-18  Score=136.95  Aligned_cols=130  Identities=18%  Similarity=0.229  Sum_probs=100.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCC--------------------------------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDI--------------------------------------   41 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~--------------------------------------   41 (174)
                      .|+|+|.||.+.|||.-|...+..... ..-|+..||+|.+.                                      
T Consensus        69 ~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgyl  148 (343)
T KOG0286|consen   69 RIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYL  148 (343)
T ss_pred             eEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCcccee
Confidence            378999999999999766554433332 34466667776541                                      


Q ss_pred             ------CCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc
Q psy6415          42 ------PMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA  115 (174)
Q Consensus        42 ------~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~  115 (174)
                            +.+.|+|+|.|.+.-+||++++.     +...+.+|.+ .|.+++++|.++++|+||+.|++.+|||+    | 
T Consensus       149 ScC~f~dD~~ilT~SGD~TCalWDie~g~-----~~~~f~GH~g-DV~slsl~p~~~ntFvSg~cD~~aklWD~----R-  217 (343)
T KOG0286|consen  149 SCCRFLDDNHILTGSGDMTCALWDIETGQ-----QTQVFHGHTG-DVMSLSLSPSDGNTFVSGGCDKSAKLWDV----R-  217 (343)
T ss_pred             EEEEEcCCCceEecCCCceEEEEEcccce-----EEEEecCCcc-cEEEEecCCCCCCeEEecccccceeeeec----c-
Confidence                  12467777778888888887754     3445569999 99999999988899999999999999999    2 


Q ss_pred             cccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         116 DTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                                             +|         .-.++|.||++.|+++.|.|+|..
T Consensus       218 -----------------------~~---------~c~qtF~ghesDINsv~ffP~G~a  243 (343)
T KOG0286|consen  218 -----------------------SG---------QCVQTFEGHESDINSVRFFPSGDA  243 (343)
T ss_pred             -----------------------Cc---------ceeEeecccccccceEEEccCCCe
Confidence                                   21         358999999999999999999864

>PTZ00421 coronin; Provisional

Probab=99.80  E-value=2.6e-18  Score=148.27  Aligned_cols=132  Identities=14%  Similarity=0.175  Sum_probs=101.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEE--------------EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW--------------ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK   67 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~--------------~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~   67 (174)
                      +++++.+.....|+...+..+.              ...|...|++|+|+|.+  ++.||+||.|++|+|||+.+.....
T Consensus        35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d--~~~LaSgS~DgtIkIWdi~~~~~~~  112 (493)
T PTZ00421         35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFD--PQKLFTASEDGTIMGWGIPEEGLTQ  112 (493)
T ss_pred             cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCC--CCEEEEEeCCCEEEEEecCCCcccc
Confidence            5667777777888865543321              22466789999999942  3789999999999999997642110


Q ss_pred             --ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          68 --GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        68 --~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                        ...+..+.+|.. .|++|+|+|.+..+||||+.|++|+|||++                            .      
T Consensus       113 ~~~~~l~~L~gH~~-~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~----------------------------t------  157 (493)
T PTZ00421        113 NISDPIVHLQGHTK-KVGIVSFHPSAMNVLASAGADMVVNVWDVE----------------------------R------  157 (493)
T ss_pred             ccCcceEEecCCCC-cEEEEEeCcCCCCEEEEEeCCCEEEEEECC----------------------------C------
Confidence              112345678998 999999999766799999999999999991                            1      


Q ss_pred             ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                         ++.+.++.+|..+|++|+|||||.-
T Consensus       158 ---g~~~~~l~~h~~~V~sla~spdG~l  182 (493)
T PTZ00421        158 ---GKAVEVIKCHSDQITSLEWNLDGSL  182 (493)
T ss_pred             ---CeEEEEEcCCCCceEEEEEECCCCE
Confidence               2357788899999999999999863

>KOG4283|consensus

Probab=99.79  E-value=1.1e-18  Score=138.47  Aligned_cols=145  Identities=18%  Similarity=0.268  Sum_probs=114.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |+.|+|-|.++|+||.+|.+....++..+.|++-+++|-......+|+|.+|-.|+|-|+..+.+     .+++.+|.+ 
T Consensus       116 mFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~-----sH~LsGHr~-  189 (397)
T KOG4283|consen  116 MFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSF-----SHTLSGHRD-  189 (397)
T ss_pred             eeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcc-----eeeeccccC-
Confidence            56789999999999999998888888888999999998654345678899999999999999764     456789999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+|.|+|...-+|||||.||.|++||+    |+   ++.-|++....         .++      ....+.+-..|..
T Consensus       190 ~vlaV~Wsp~~e~vLatgsaDg~irlWDi----Rr---asgcf~~lD~h---------n~k------~~p~~~~n~ah~g  247 (397)
T KOG4283|consen  190 GVLAVEWSPSSEWVLATGSADGAIRLWDI----RR---ASGCFRVLDQH---------NTK------RPPILKTNTAHYG  247 (397)
T ss_pred             ceEEEEeccCceeEEEecCCCceEEEEEe----ec---ccceeEEeecc---------cCc------cCccccccccccc
Confidence            99999999998899999999999999999    21   22223332111         111      1123556778999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|++++|+.|+..
T Consensus       248 kvngla~tSd~~~  260 (397)
T KOG4283|consen  248 KVNGLAWTSDARY  260 (397)
T ss_pred             eeeeeeecccchh
Confidence            9999999999864

>KOG0276|consensus

Probab=99.79  E-value=1.5e-18  Score=148.34  Aligned_cols=126  Identities=12%  Similarity=0.168  Sum_probs=108.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .|++|++|..|++++.+++..+..+ .|.+=|++|+.+|..   .+++|+|+|.+||+||-++.=.    ..+++.+|+.
T Consensus        69 Wiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~---P~vLtsSDDm~iKlW~we~~wa----~~qtfeGH~H  141 (794)
T KOG0276|consen   69 WIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTL---PYVLTSSDDMTIKLWDWENEWA----CEQTFEGHEH  141 (794)
T ss_pred             eEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCC---CeEEecCCccEEEEeeccCcee----eeeEEcCcce
Confidence            3789999999999999999887765 467779999999964   7899999999999999987421    2346789999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       -|.+|+|+|.|.+.|||||-|++||+|.+.                                     +....++++||+
T Consensus       142 -yVMqv~fnPkD~ntFaS~sLDrTVKVWslg-------------------------------------s~~~nfTl~gHe  183 (794)
T KOG0276|consen  142 -YVMQVAFNPKDPNTFASASLDRTVKVWSLG-------------------------------------SPHPNFTLEGHE  183 (794)
T ss_pred             -EEEEEEecCCCccceeeeeccccEEEEEcC-------------------------------------CCCCceeeeccc
Confidence             999999999999999999999999999991                                     112478999999


Q ss_pred             cceeeeeeCCCC
Q psy6415         160 QPINSLDWSADK  171 (174)
Q Consensus       160 ~~V~~l~~spd~  171 (174)
                      ..||+++|=|-|
T Consensus       184 kGVN~Vdyy~~g  195 (794)
T KOG0276|consen  184 KGVNCVDYYTGG  195 (794)
T ss_pred             cCcceEEeccCC
Confidence            999999997743

>KOG0291|consensus

Probab=99.79  E-value=1.6e-18  Score=150.64  Aligned_cols=154  Identities=14%  Similarity=0.237  Sum_probs=112.6

Q ss_pred             EEEEec-CCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYD-NGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~-Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      ||-|+. =|.+-+|++++...+... .|-..+++++++|++   +.||||++||.|||||.+.+     |...++..|+.
T Consensus       322 iA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDg---q~iaTG~eDgKVKvWn~~Sg-----fC~vTFteHts  393 (893)
T KOG0291|consen  322 IAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDG---QLIATGAEDGKVKVWNTQSG-----FCFVTFTEHTS  393 (893)
T ss_pred             EEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCC---cEEEeccCCCcEEEEeccCc-----eEEEEeccCCC
Confidence            344443 479999999988876554 477889999999975   99999999999999999985     44567779999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc--cccc-cccccceeeeecCCCCCCcccCCCCCccc------------
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS--ALRA-DTNLCSIFRYSSNYPTQRTKPDIDDIPMG------------  144 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~dg~~~~------------  144 (174)
                       .|..+.|+. .++.+.|+|-||+|+.||+.-  -+|+ ..|.---|.|..        .|+.|..+-            
T Consensus       394 -~Vt~v~f~~-~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~Qfscva--------vD~sGelV~AG~~d~F~IfvW  463 (893)
T KOG0291|consen  394 -GVTAVQFTA-RGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVA--------VDPSGELVCAGAQDSFEIFVW  463 (893)
T ss_pred             -ceEEEEEEe-cCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEE--------EcCCCCEEEeeccceEEEEEE
Confidence             999999999 567899999999999999921  0010 000000111111        112232221            


Q ss_pred             cccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         145 VPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       145 ~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      ...+++|+..+.||+.||.+|+|+|++.-
T Consensus       464 S~qTGqllDiLsGHEgPVs~l~f~~~~~~  492 (893)
T KOG0291|consen  464 SVQTGQLLDILSGHEGPVSGLSFSPDGSL  492 (893)
T ss_pred             EeecCeeeehhcCCCCcceeeEEccccCe
Confidence            13788999999999999999999999864

>KOG0265|consensus

Probab=99.79  E-value=1.6e-18  Score=137.43  Aligned_cols=160  Identities=16%  Similarity=0.272  Sum_probs=117.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ||.||++||++||||+|+...+.++..+..+++|.|+...   ..+.+|+-|+.||+||+|.++.     .+++.+|.+ 
T Consensus       147 lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s---~qv~sggIdn~ikvWd~r~~d~-----~~~lsGh~D-  217 (338)
T KOG0265|consen  147 LVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTS---DQVISGGIDNDIKVWDLRKNDG-----LYTLSGHAD-  217 (338)
T ss_pred             EEEecCCCceEEEEeecccchhhccccceeEEEEEecccc---cceeeccccCceeeeccccCcc-----eEEeecccC-
Confidence            5899999999999999998887777667889999999753   7899999999999999998764     356689999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccc-cceeeee----------cCC-CCCCcc-cCCCCCcccc--
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNL-CSIFRYS----------SNY-PTQRTK-PDIDDIPMGV--  145 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~-~~~~~~~----------~~~-~~~~~~-~~~dg~~~~~--  145 (174)
                      +|..++.+|. +..+.|-+.|.+|++||+.--  .+..- -++|+.+          .++ |...-+ +-.....+++  
T Consensus       218 tIt~lsls~~-gs~llsnsMd~tvrvwd~rp~--~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd  294 (338)
T KOG0265|consen  218 TITGLSLSRY-GSFLLSNSMDNTVRVWDVRPF--APSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWD  294 (338)
T ss_pred             ceeeEEeccC-CCccccccccceEEEEEeccc--CCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEee
Confidence            9999999995 567899999999999999210  11111 1233322          122 222111 0011112222  


Q ss_pred             ccccceeeeeeccccceeeeeeCCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      +....++..+.||...|+.++|+|..+
T Consensus       295 ~~~r~~lyklpGh~gsvn~~~Fhp~e~  321 (338)
T KOG0265|consen  295 TTSRRILYKLPGHYGSVNEVDFHPTEP  321 (338)
T ss_pred             cccccEEEEcCCcceeEEEeeecCCCc
Confidence            233368999999999999999999865

>PTZ00420 coronin; Provisional

Probab=99.79  E-value=4e-18  Score=148.69  Aligned_cols=99  Identities=7%  Similarity=0.160  Sum_probs=79.2

Q ss_pred             CEEEEecCCcEEEEECCCCCe--------E-EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL--------K-WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY   71 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~--------~-~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~   71 (174)
                      +||||+.||+|+|||++++..        . ....|...|.+|+|+|++  ...|++++.|++|+|||+++.+..     
T Consensus        89 lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g--~~iLaSgS~DgtIrIWDl~tg~~~-----  161 (568)
T PTZ00420         89 ILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMN--YYIMCSSGFDSFVNIWDIENEKRA-----  161 (568)
T ss_pred             EEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCC--CeEEEEEeCCCeEEEEECCCCcEE-----
Confidence            489999999999999986421        1 123467889999999974  245689999999999999986532     


Q ss_pred             eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+ .|.. .|.+++|+| ++.+||+++.|++|+|||+
T Consensus       162 ~~i-~~~~-~V~Slswsp-dG~lLat~s~D~~IrIwD~  196 (568)
T PTZ00420        162 FQI-NMPK-KLSSLKWNI-KGNLLSGTCVGKHMHIIDP  196 (568)
T ss_pred             EEE-ecCC-cEEEEEECC-CCCEEEEEecCCEEEEEEC
Confidence            223 3556 899999999 5679999999999999999

>KOG0295|consensus

Probab=99.79  E-value=1.5e-18  Score=140.38  Aligned_cols=128  Identities=10%  Similarity=0.095  Sum_probs=109.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .|+|++.|.+||.||+.++-++.++. |.+-|..|+.+.+   +..+|++|.|.+|++|=+.+.+|...     ++.|+-
T Consensus       207 ~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~D---Gti~As~s~dqtl~vW~~~t~~~k~~-----lR~hEh  278 (406)
T KOG0295|consen  207 HILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQD---GTIIASCSNDQTLRVWVVATKQCKAE-----LREHEH  278 (406)
T ss_pred             eeeecccccceeEEecccceeEEeccCchHhEEEEEecCC---eeEEEecCCCceEEEEEeccchhhhh-----hhcccc
Confidence            47899999999999999999988754 6678999999986   48999999999999999999865432     357888


Q ss_pred             CcEEEEEEcCC--------------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          80 TTVWAAKHLPQ--------------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        80 ~~i~~v~fsP~--------------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                       +|-+++|-|.              ++++++++|.|++||+||+                                    
T Consensus       279 -~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv------------------------------------  321 (406)
T KOG0295|consen  279 -PVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDV------------------------------------  321 (406)
T ss_pred             -ceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEec------------------------------------
Confidence             8889988764              2358999999999999999                                    


Q ss_pred             ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                       .++++|+++.||..+|++++|||-|+.|
T Consensus       322 -~tg~cL~tL~ghdnwVr~~af~p~Gkyi  349 (406)
T KOG0295|consen  322 -STGMCLFTLVGHDNWVRGVAFSPGGKYI  349 (406)
T ss_pred             -cCCeEEEEEecccceeeeeEEcCCCeEE
Confidence             1356899999999999999999999864

>PTZ00420 coronin; Provisional

Probab=99.78  E-value=3.3e-18  Score=149.23  Aligned_cols=103  Identities=14%  Similarity=0.166  Sum_probs=80.8

Q ss_pred             EEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc-ccc--eeeeeecccCc
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR-EKG--FAYLSEKAHKA   79 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~-~~~--~~~~~~~~h~~   79 (174)
                      .|+.++.|++|++........ ..|...|.+++|+|+.  ++.||||+.|++|+|||+++... ...  .....+.+|..
T Consensus        49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~--~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~  126 (568)
T PTZ00420         49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCF--SEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK  126 (568)
T ss_pred             CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCC--CCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC
Confidence            466788999999866555444 3477889999999963  47899999999999999986421 110  11234568998


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .|.+|+|+|.+..+||||+.||+|+|||+
T Consensus       127 -~V~sVaf~P~g~~iLaSgS~DgtIrIWDl  155 (568)
T PTZ00420        127 -KISIIDWNPMNYYIMCSSGFDSFVNIWDI  155 (568)
T ss_pred             -cEEEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence             99999999977667899999999999999

>KOG0269|consensus

Probab=99.78  E-value=1.1e-18  Score=151.80  Aligned_cols=101  Identities=23%  Similarity=0.375  Sum_probs=86.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|+|||.||+||+||+|..+..... ...+.|+.|.|+|..  ++.++++.+.|.+++||+|.....    ...+.+|.+
T Consensus       148 iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~--~~~F~s~~dsG~lqlWDlRqp~r~----~~k~~AH~G  221 (839)
T KOG0269|consen  148 ILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGY--GNKFASIHDSGYLQLWDLRQPDRC----EKKLTAHNG  221 (839)
T ss_pred             EEEecCCCceEEEEeeecccccccccccchhhhceeeccCC--CceEEEecCCceEEEeeccCchhH----HHHhhcccC
Confidence            4899999999999999987655443 345779999999964  789999999999999999986421    123469999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       +|.++.||| ++.+|||||.|++|+|||+
T Consensus       222 -pV~c~nwhP-nr~~lATGGRDK~vkiWd~  249 (839)
T KOG0269|consen  222 -PVLCLNWHP-NREWLATGGRDKMVKIWDM  249 (839)
T ss_pred             -ceEEEeecC-CCceeeecCCCccEEEEec
Confidence             999999999 7889999999999999999

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.76  E-value=1.5e-17  Score=150.85  Aligned_cols=133  Identities=18%  Similarity=0.259  Sum_probs=105.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|+||+.||+|++||++++.+.........|++++|++..  ++.|++|+.|++|++||+++...    ...++.+|.. 
T Consensus       590 ~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--g~~latgs~dg~I~iwD~~~~~~----~~~~~~~h~~-  662 (793)
T PLN00181        590 LLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSES--GRSLAFGSADHKVYYYDLRNPKL----PLCTMIGHSK-  662 (793)
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCC--CCEEEEEeCCCeEEEEECCCCCc----cceEecCCCC-
Confidence            4899999999999999998887766666789999997642  58999999999999999987531    1234568998 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|++++|.+  +..|+|++.|++|+|||+..    ..                     .+      ...+.+.++.+|..
T Consensus       663 ~V~~v~f~~--~~~lvs~s~D~~ikiWd~~~----~~---------------------~~------~~~~~l~~~~gh~~  709 (793)
T PLN00181        663 TVSYVRFVD--SSTLVSSSTDNTLKLWDLSM----SI---------------------SG------INETPLHSFMGHTN  709 (793)
T ss_pred             CEEEEEEeC--CCEEEEEECCCEEEEEeCCC----Cc---------------------cc------cCCcceEEEcCCCC
Confidence            999999974  46899999999999999910    00                     00      01246788999999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      .|+.++|+|+++.
T Consensus       710 ~i~~v~~s~~~~~  722 (793)
T PLN00181        710 VKNFVGLSVSDGY  722 (793)
T ss_pred             CeeEEEEcCCCCE
Confidence            9999999998753

>KOG0305|consensus

Probab=99.76  E-value=5.8e-18  Score=143.96  Aligned_cols=163  Identities=18%  Similarity=0.237  Sum_probs=119.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      .+.+|+.||.|..+|+|..+....  ..|...||.+.|++++   ++||+|+.|+.+.|||....++.     ..+..|.
T Consensus       272 ~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~---~~lASGgnDN~~~Iwd~~~~~p~-----~~~~~H~  343 (484)
T KOG0305|consen  272 VLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDG---NQLASGGNDNVVFIWDGLSPEPK-----FTFTEHT  343 (484)
T ss_pred             eEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCC---CeeccCCCccceEeccCCCcccc-----EEEeccc
Confidence            378999999999999998765433  3477899999999974   99999999999999999765543     3456899


Q ss_pred             cCcEEEEEEcCCCCCEEEEEc--CCCcEEEEeccccccccccccceeeeecCC-CCCCcccC----CCC-Cccccccccc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCG--GSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKPD----IDD-IPMGVPGSLT  150 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s--~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~dg-~~~~~~~~~~  150 (174)
                      . +|..++|+|....+||+|+  .|+.|++||.-+..+.+.-.+....|+..| +..+.+..    .+. ..+....+.+
T Consensus       344 a-AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~  422 (484)
T KOG0305|consen  344 A-AVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMK  422 (484)
T ss_pred             e-eeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccc
Confidence            9 9999999999999999985  499999999943222222222233344333 22222211    111 1111135567


Q ss_pred             eeeeeeccccceeeeeeCCCCC
Q psy6415         151 LLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       151 ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      ++..+.||+..|..|++||||.
T Consensus       423 ~~~~l~gH~~RVl~la~SPdg~  444 (484)
T KOG0305|consen  423 LVAELLGHTSRVLYLALSPDGE  444 (484)
T ss_pred             eeeeecCCcceeEEEEECCCCC
Confidence            8999999999999999999985

>KOG0283|consensus

Probab=99.76  E-value=2.6e-18  Score=150.14  Aligned_cols=72  Identities=15%  Similarity=0.334  Sum_probs=66.1

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEE
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNL  106 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~l  106 (174)
                      |...|-.|+|+.+    +.|+++|.|.|||||++...+|++.|      .|.+ -|.||+|+|-|..+|+|||-||.|+|
T Consensus       368 Ht~DILDlSWSKn----~fLLSSSMDKTVRLWh~~~~~CL~~F------~Hnd-fVTcVaFnPvDDryFiSGSLD~KvRi  436 (712)
T KOG0283|consen  368 HTADILDLSWSKN----NFLLSSSMDKTVRLWHPGRKECLKVF------SHND-FVTCVAFNPVDDRYFISGSLDGKVRL  436 (712)
T ss_pred             cchhheecccccC----CeeEeccccccEEeecCCCcceeeEE------ecCC-eeEEEEecccCCCcEeecccccceEE
Confidence            4567889999985    88999999999999999998887665      7999 99999999999999999999999999


Q ss_pred             Eec
Q psy6415         107 WQL  109 (174)
Q Consensus       107 Wd~  109 (174)
                      |++
T Consensus       437 WsI  439 (712)
T KOG0283|consen  437 WSI  439 (712)
T ss_pred             eec
Confidence            999

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.76  E-value=2.3e-17  Score=149.62  Aligned_cols=100  Identities=12%  Similarity=0.162  Sum_probs=83.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .||+|+.||+|+|||+.+++..... .|...|++++|+|.+  ++.|+||+.|++|+|||+++..+.     .++..+ .
T Consensus       547 ~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~--~~~L~Sgs~Dg~v~iWd~~~~~~~-----~~~~~~-~  618 (793)
T PLN00181        547 QVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSAD--PTLLASGSDDGSVKLWSINQGVSI-----GTIKTK-A  618 (793)
T ss_pred             EEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCC--CCEEEEEcCCCEEEEEECCCCcEE-----EEEecC-C
Confidence            3799999999999999988776554 467889999999742  478999999999999999986543     233333 5


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .|.++.|+|.++.+||+|+.||+|++||+
T Consensus       619 -~v~~v~~~~~~g~~latgs~dg~I~iwD~  647 (793)
T PLN00181        619 -NICCVQFPSESGRSLAFGSADHKVYYYDL  647 (793)
T ss_pred             -CeEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence             79999998767889999999999999999

>KOG1007|consensus

Probab=99.75  E-value=9e-18  Score=132.94  Aligned_cols=150  Identities=19%  Similarity=0.271  Sum_probs=106.4

Q ss_pred             ecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415           6 YDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      ..|+++..||+|+..+....  .|...|..++|||+-  +..||||++||.|||||.|+.+    +++.++.+|.. .||
T Consensus       190 t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnk--q~~lvt~gDdgyvriWD~R~tk----~pv~el~~HsH-WvW  262 (370)
T KOG1007|consen  190 TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNK--QHILVTCGDDGYVRIWDTRKTK----FPVQELPGHSH-WVW  262 (370)
T ss_pred             eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCc--eEEEEEcCCCccEEEEeccCCC----ccccccCCCce-EEE
Confidence            45799999999998876554  466779999999974  5679999999999999999854    45567789999 999


Q ss_pred             EEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeec-CCCCCCcccCCCCCccccccccceeeeeeccccce
Q psy6415          84 AAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSS-NYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPI  162 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V  162 (174)
                      +|+|+|...+++.|+|.|..|.||...+..-++.   -.|+--. +.++....  +.-+    +-+--+|.++.-|...|
T Consensus       263 ~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~q---i~~~~dese~e~~dse--er~k----pL~dg~l~tydehEDSV  333 (370)
T KOG1007|consen  263 AVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQ---IEFEDDESESEDEDSE--ERVK----PLQDGQLETYDEHEDSV  333 (370)
T ss_pred             EEEecCccceEEEecCCCceeEEEeccccccccc---cccccccccCcchhhH--Hhcc----cccccccccccccccce
Confidence            9999999889999999999999999844111000   0000000 00000000  0000    01112578999999999


Q ss_pred             eeeeeCCCC
Q psy6415         163 NSLDWSADK  171 (174)
Q Consensus       163 ~~l~~spd~  171 (174)
                      +.++||.-.
T Consensus       334 Y~~aWSsad  342 (370)
T KOG1007|consen  334 YALAWSSAD  342 (370)
T ss_pred             EEEeeccCC
Confidence            999999644

>KOG0288|consensus

Probab=99.75  E-value=1.7e-17  Score=136.14  Aligned_cols=130  Identities=21%  Similarity=0.336  Sum_probs=102.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      ++||..|++|++||+|+..+.......+.|.+|+.++++   ..|++++.|.++++.|+|+.+..+.|....... .. .
T Consensus       315 ~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g---~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~-as-D  389 (459)
T KOG0288|consen  315 VISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDG---LELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKC-AS-D  389 (459)
T ss_pred             eeecccccceEEEeccCCceeeEeecCcceeeEeeccCC---eEEeeecCCCceeeeecccccEEEEeecccccc-cc-c
Confidence            678999999999999999988887777899999999864   889999999999999999987554443211111 12 4


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc-
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ-  160 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~-  160 (174)
                      .+.+.||| ++.++|+||.||.|+||++                             .        ++++-+.+...+. 
T Consensus       390 wtrvvfSp-d~~YvaAGS~dgsv~iW~v-----------------------------~--------tgKlE~~l~~s~s~  431 (459)
T KOG0288|consen  390 WTRVVFSP-DGSYVAAGSADGSVYIWSV-----------------------------F--------TGKLEKVLSLSTSN  431 (459)
T ss_pred             cceeEECC-CCceeeeccCCCcEEEEEc-----------------------------c--------CceEEEEeccCCCC
Confidence            67899999 5678999999999999999                             1        1234444444444 


Q ss_pred             -ceeeeeeCCCCCCC
Q psy6415         161 -PINSLDWSADKLGL  174 (174)
Q Consensus       161 -~V~~l~~spd~~~~  174 (174)
                       .|++++|+|-|.||
T Consensus       432 ~aI~s~~W~~sG~~L  446 (459)
T KOG0288|consen  432 AAITSLSWNPSGSGL  446 (459)
T ss_pred             cceEEEEEcCCCchh
Confidence             59999999999886

>KOG0270|consensus

Probab=99.75  E-value=2.5e-17  Score=136.04  Aligned_cols=130  Identities=13%  Similarity=0.179  Sum_probs=109.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|||||.|.+|++||+.++++..... |...|.+++|+|..  +..|++||.|++|+|.|.|...+.. .   .+ .-.+
T Consensus       258 VLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~--p~~LLsGs~D~~V~l~D~R~~~~s~-~---~w-k~~g  330 (463)
T KOG0270|consen  258 VLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYE--PSVLLSGSYDGTVALKDCRDPSNSG-K---EW-KFDG  330 (463)
T ss_pred             eEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCC--ceEEEeccccceEEeeeccCccccC-c---eE-Eecc
Confidence            58999999999999999999987766 56789999999974  6889999999999999999643321 1   11 1234


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|-.|+|.|+....|..+..||+|+-+|+    |.                       .         ++.++++..|.
T Consensus       331 -~VEkv~w~~~se~~f~~~tddG~v~~~D~----R~-----------------------~---------~~~vwt~~AHd  373 (463)
T KOG0270|consen  331 -EVEKVAWDPHSENSFFVSTDDGTVYYFDI----RN-----------------------P---------GKPVWTLKAHD  373 (463)
T ss_pred             -ceEEEEecCCCceeEEEecCCceEEeeec----CC-----------------------C---------CCceeEEEecc
Confidence             78999999999999999999999999999    21                       1         25799999999


Q ss_pred             cceeeeeeCCCCCCC
Q psy6415         160 QPINSLDWSADKLGL  174 (174)
Q Consensus       160 ~~V~~l~~spd~~~~  174 (174)
                      .+|.+|++|+..+||
T Consensus       374 ~~ISgl~~n~~~p~~  388 (463)
T KOG0270|consen  374 DEISGLSVNIQTPGL  388 (463)
T ss_pred             CCcceEEecCCCCcc
Confidence            999999999998885

>KOG0265|consensus

Probab=99.75  E-value=3.3e-17  Score=130.03  Aligned_cols=163  Identities=13%  Similarity=0.115  Sum_probs=112.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE--EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW--ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~--~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ++|||+.|..|-||++-.....+  ...|.+.|+.|.|++++   +.|+++|.|.+|+.||++++++.+     .++.|.
T Consensus        61 ~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~---s~i~S~gtDk~v~~wD~~tG~~~r-----k~k~h~  132 (338)
T KOG0265|consen   61 CFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDG---SHILSCGTDKTVRGWDAETGKRIR-----KHKGHT  132 (338)
T ss_pred             eEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCC---CEEEEecCCceEEEEecccceeee-----hhcccc
Confidence            58999999999999985433221  23578899999999975   899999999999999999987653     346898


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccc--ccceeeeecCCCC-CCcccC--CCCC-cccccccccee
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTN--LCSIFRYSSNYPT-QRTKPD--IDDI-PMGVPGSLTLL  152 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~--~dg~-~~~~~~~~~ll  152 (174)
                      . -|+++.-+..+..+++|++-||++||||+.++....+.  .-+++  ...|.+ ..++++  .|+. .+=..-..+.+
T Consensus       133 ~-~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqlt--Av~f~d~s~qv~sggIdn~ikvWd~r~~d~~  209 (338)
T KOG0265|consen  133 S-FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLT--AVGFKDTSDQVISGGIDNDIKVWDLRKNDGL  209 (338)
T ss_pred             c-eeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEE--EEEecccccceeeccccCceeeeccccCcce
Confidence            8 99999866667789999999999999999321111111  11122  222211 111111  1110 00001122578


Q ss_pred             eeeeccccceeeeeeCCCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      +++.||..+|..|.-||+|.-|
T Consensus       210 ~~lsGh~DtIt~lsls~~gs~l  231 (338)
T KOG0265|consen  210 YTLSGHADTITGLSLSRYGSFL  231 (338)
T ss_pred             EEeecccCceeeEEeccCCCcc
Confidence            9999999999999999998643

>KOG0318|consensus

Probab=99.74  E-value=3.6e-17  Score=137.58  Aligned_cols=160  Identities=17%  Similarity=0.311  Sum_probs=111.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|||++|++|.+++=.-.+..... .|..-|++|.|+|++   .++||++.||+|.|||=.+++.+..+  ....+|++ 
T Consensus       163 i~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG---~~Fat~gsDgki~iyDGktge~vg~l--~~~~aHkG-  236 (603)
T KOG0318|consen  163 IATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDG---SRFATAGSDGKIYIYDGKTGEKVGEL--EDSDAHKG-  236 (603)
T ss_pred             EEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCC---CeEEEecCCccEEEEcCCCccEEEEe--cCCCCccc-
Confidence            799999999999974433333332 356679999999985   89999999999999999987754322  12348999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecC---------CC-CCCcccCCCCCcccc-cccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSN---------YP-TQRTKPDIDDIPMGV-PGSL  149 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~dg~~~~~-~~~~  149 (174)
                      .|++++|+| |...|+|+|.|.++||||+.+.     ...+.|.++..         ++ +.......+|..... +..+
T Consensus       237 sIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~-----slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~  310 (603)
T KOG0318|consen  237 SIFALSWSP-DSTQFLTVSADKTIKIWDVSTN-----SLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDP  310 (603)
T ss_pred             cEEEEEECC-CCceEEEecCCceEEEEEeecc-----ceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCC
Confidence            999999999 5678999999999999999430     11111222211         10 000001123322211 2334


Q ss_pred             ceeeeeeccccceeeeeeCCCCCC
Q psy6415         150 TLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       150 ~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      +.++.+.||.+.|.+|.-|||++.
T Consensus       311 ~~~~~i~GHnK~ITaLtv~~d~~~  334 (603)
T KOG0318|consen  311 SVLKVISGHNKSITALTVSPDGKT  334 (603)
T ss_pred             ChhheecccccceeEEEEcCCCCE
Confidence            578999999999999999999864

>KOG0269|consensus

Probab=99.74  E-value=4.8e-18  Score=147.79  Aligned_cols=128  Identities=21%  Similarity=0.413  Sum_probs=104.3

Q ss_pred             CEEEEecCCcEEEEECCC---CCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKT---MSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~---~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|||++..|.|-+||+..   +++... ..|...|++++|++..  .++|++||.||+||+||+|......     ++.+
T Consensus       102 lIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~te--p~iliSGSQDg~vK~~DlR~~~S~~-----t~~~  174 (839)
T KOG0269|consen  102 LIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTE--PNILISGSQDGTVKCWDLRSKKSKS-----TFRS  174 (839)
T ss_pred             hheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCC--ccEEEecCCCceEEEEeeecccccc-----cccc
Confidence            589999999999999976   333333 3477889999999864  6899999999999999999876433     2335


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT  156 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~  156 (174)
                      -.. .|..|+|+|..+..||++...|.+++||+    |.              |        +          +....++
T Consensus       175 nSE-SiRDV~fsp~~~~~F~s~~dsG~lqlWDl----Rq--------------p--------~----------r~~~k~~  217 (839)
T KOG0269|consen  175 NSE-SIRDVKFSPGYGNKFASIHDSGYLQLWDL----RQ--------------P--------D----------RCEKKLT  217 (839)
T ss_pred             cch-hhhceeeccCCCceEEEecCCceEEEeec----cC--------------c--------h----------hHHHHhh
Confidence            556 89999999988999999999999999999    21              1        1          2357788


Q ss_pred             ccccceeeeeeCCCCC
Q psy6415         157 LSSQPINSLDWSADKL  172 (174)
Q Consensus       157 ~h~~~V~~l~~spd~~  172 (174)
                      .|..||.++.|||++.
T Consensus       218 AH~GpV~c~nwhPnr~  233 (839)
T KOG0269|consen  218 AHNGPVLCLNWHPNRE  233 (839)
T ss_pred             cccCceEEEeecCCCc
Confidence            9999999999999764

>KOG0276|consensus

Probab=99.74  E-value=1.5e-17  Score=142.35  Aligned_cols=125  Identities=14%  Similarity=0.263  Sum_probs=104.2

Q ss_pred             CEEEEecCCcEEEEECCCC-CeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTM-SLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~-~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ++.|+|+|-+||+||.+.+ .+.+.+ .|..=|+.|+|+|.+  .+.+|++|.|+|||||.+....+.     .++.+|.
T Consensus       111 ~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD--~ntFaS~sLDrTVKVWslgs~~~n-----fTl~gHe  183 (794)
T KOG0276|consen  111 YVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKD--PNTFASASLDRTVKVWSLGSPHPN-----FTLEGHE  183 (794)
T ss_pred             eEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCC--ccceeeeeccccEEEEEcCCCCCc-----eeeeccc
Confidence            4789999999999999754 344444 456679999999986  589999999999999999887653     3567999


Q ss_pred             cCcEEEEEEcCCC-CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          79 ATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        79 ~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      . .|++|.|-|-+ ..+|+||+.|.+||+||++                                     +...+++++|
T Consensus       184 k-GVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ-------------------------------------tk~CV~TLeG  225 (794)
T KOG0276|consen  184 K-GVNCVDYYTGGDKPYLISGADDLTIKVWDYQ-------------------------------------TKSCVQTLEG  225 (794)
T ss_pred             c-CcceEEeccCCCcceEEecCCCceEEEeecc-------------------------------------hHHHHHHhhc
Confidence            9 99999998832 3489999999999999991                                     1235899999


Q ss_pred             cccceeeeeeCCC
Q psy6415         158 SSQPINSLDWSAD  170 (174)
Q Consensus       158 h~~~V~~l~~spd  170 (174)
                      |.+-|..+.|+|-
T Consensus       226 Ht~Nvs~v~fhp~  238 (794)
T KOG0276|consen  226 HTNNVSFVFFHPE  238 (794)
T ss_pred             ccccceEEEecCC
Confidence            9999999999995

>KOG0281|consensus

Probab=99.74  E-value=4.2e-18  Score=137.72  Aligned_cols=158  Identities=12%  Similarity=0.151  Sum_probs=103.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|+|||.|.+|++||+++++++.. +.|.+.|-.+.|+.     ++++|+|.|.+|++||+..+....  ..+.+.+|..
T Consensus       249 viisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n-----g~mvtcSkDrsiaVWdm~sps~it--~rrVLvGHrA  321 (499)
T KOG0281|consen  249 VIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN-----GYMVTCSKDRSIAVWDMASPTDIT--LRRVLVGHRA  321 (499)
T ss_pred             EEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC-----CEEEEecCCceeEEEeccCchHHH--HHHHHhhhhh
Confidence            478899999999999998887655 45668888888884     688999999999999988764221  1234569999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc-cccccccccceeeeecCCCCCCcccCCCCCcccc--ccccceeeeee
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS-ALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV--PGSLTLLQEAT  156 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~--~~~~~ll~~~~  156 (174)
                       +|+.|.|..   .+++|||+|.+||+|++.+ .+-+.-++++-.....-|-+...+-......+.+  ...+.+|..++
T Consensus       322 -aVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLe  397 (499)
T KOG0281|consen  322 -AVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE  397 (499)
T ss_pred             -heeeecccc---ceEEEecCCceEEEEeccceeeehhhhcccccceehhccCeEEEecCCCceEEEEeccccHHHHHHh
Confidence             999999964   4899999999999999944 0000001111000001110000000001111111  46668889999


Q ss_pred             ccccceeeeeeCC
Q psy6415         157 LSSQPINSLDWSA  169 (174)
Q Consensus       157 ~h~~~V~~l~~sp  169 (174)
                      ||+.=|+++-|.-
T Consensus       398 GHEeLvRciRFd~  410 (499)
T KOG0281|consen  398 GHEELVRCIRFDN  410 (499)
T ss_pred             chHHhhhheeecC
Confidence            9999999998874

>KOG0295|consensus

Probab=99.74  E-value=3.7e-17  Score=132.43  Aligned_cols=128  Identities=15%  Similarity=0.242  Sum_probs=104.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCC------------CCCEEEEEeCCCcEEEEECCCccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDI------------PMNKLVATTLEAKLFVFDLKTLHREK   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~------------~~~~l~s~s~Dg~I~iWD~~~~~~~~   67 (174)
                      ++||++.|.+|++|=+.++++.... .|.-.|-+++|-|...            .++.++++|.|++||+||+.++.|  
T Consensus       249 i~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~c--  326 (406)
T KOG0295|consen  249 IIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMC--  326 (406)
T ss_pred             EEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeE--
Confidence            4799999999999999998765443 3556677887765432            246899999999999999999754  


Q ss_pred             ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415          68 GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG  147 (174)
Q Consensus        68 ~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~  147 (174)
                         +.++.+|.+ .|..++|+| ++.+|+|+..|+++++||+.                                     
T Consensus       327 ---L~tL~ghdn-wVr~~af~p-~Gkyi~ScaDDktlrvwdl~-------------------------------------  364 (406)
T KOG0295|consen  327 ---LFTLVGHDN-WVRGVAFSP-GGKYILSCADDKTLRVWDLK-------------------------------------  364 (406)
T ss_pred             ---EEEEecccc-eeeeeEEcC-CCeEEEEEecCCcEEEEEec-------------------------------------
Confidence               457789999 999999999 67899999999999999991                                     


Q ss_pred             ccceeeeeeccccceeeeeeCCCCC
Q psy6415         148 SLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       148 ~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      ..+.+.+++.|+.-|.+++|+.+-+
T Consensus       365 ~~~cmk~~~ah~hfvt~lDfh~~~p  389 (406)
T KOG0295|consen  365 NLQCMKTLEAHEHFVTSLDFHKTAP  389 (406)
T ss_pred             cceeeeccCCCcceeEEEecCCCCc
Confidence            1234677889999999999987654

>KOG0267|consensus

Probab=99.73  E-value=2e-18  Score=149.36  Aligned_cols=124  Identities=18%  Similarity=0.335  Sum_probs=105.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+||+||+...+....+ .|...+.+|+|+|.+   .+.|+||.|..+++||+|...|.+.|     .+|..
T Consensus        84 LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~---~~~a~gStdtd~~iwD~Rk~Gc~~~~-----~s~~~  155 (825)
T KOG0267|consen   84 LLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYG---EFFASGSTDTDLKIWDIRKKGCSHTY-----KSHTR  155 (825)
T ss_pred             hhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccce---EEeccccccccceehhhhccCceeee-----cCCcc
Confidence            4789999999999999988766543 567889999999975   77899999999999999977665443     57888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|..++|+| ++.++++|++|.+|+|||+                                     ..++++.+|.+|+
T Consensus       156 -vv~~l~lsP-~Gr~v~~g~ed~tvki~d~-------------------------------------~agk~~~ef~~~e  196 (825)
T KOG0267|consen  156 -VVDVLRLSP-DGRWVASGGEDNTVKIWDL-------------------------------------TAGKLSKEFKSHE  196 (825)
T ss_pred             -eeEEEeecC-CCceeeccCCcceeeeecc-------------------------------------ccccccccccccc
Confidence             899999999 5679999999999999999                                     0246899999999


Q ss_pred             cceeeeeeCCCC
Q psy6415         160 QPINSLDWSADK  171 (174)
Q Consensus       160 ~~V~~l~~spd~  171 (174)
                      .+|.++.|+|..
T Consensus       197 ~~v~sle~hp~e  208 (825)
T KOG0267|consen  197 GKVQSLEFHPLE  208 (825)
T ss_pred             ccccccccCchh
Confidence            999999999853

>KOG0282|consensus

Probab=99.73  E-value=4.7e-18  Score=141.48  Aligned_cols=125  Identities=17%  Similarity=0.290  Sum_probs=103.9

Q ss_pred             CEEEEecCCcEEEEECCC-CCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKT-MSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~-~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|+||+.|+.|+||++.. +.++.++ .|..+|.+++|+..+   ..++|+|.|+.||+||++++.+...|       |.
T Consensus       229 LlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g---~~fLS~sfD~~lKlwDtETG~~~~~f-------~~  298 (503)
T KOG0282|consen  229 LLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCG---TSFLSASFDRFLKLWDTETGQVLSRF-------HL  298 (503)
T ss_pred             EEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccC---CeeeeeecceeeeeeccccceEEEEE-------ec
Confidence            589999999999999876 6676664 567889999999874   89999999999999999998765432       33


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      +..+++|.|+|++.++|.+|+.|+.|+.||+    |                                 .+++++++.-|
T Consensus       299 ~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDi----R---------------------------------s~kvvqeYd~h  341 (503)
T KOG0282|consen  299 DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDI----R---------------------------------SGKVVQEYDRH  341 (503)
T ss_pred             CCCceeeecCCCCCcEEEEecCCCcEEEEec----c---------------------------------chHHHHHHHhh
Confidence            3367899999998899999999999999999    2                                 13577888788


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      -++|++|.|=|+++
T Consensus       342 Lg~i~~i~F~~~g~  355 (503)
T KOG0282|consen  342 LGAILDITFVDEGR  355 (503)
T ss_pred             hhheeeeEEccCCc
Confidence            88888888887764

>KOG0282|consensus

Probab=99.73  E-value=4.1e-17  Score=135.92  Aligned_cols=101  Identities=14%  Similarity=0.225  Sum_probs=88.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +.|++-|++||+||+.+|++...+.....+++|.|+|++  .+.+++|+.|+.|+.||+|+++.+++|     ..|-+ +
T Consensus       273 fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~--~n~fl~G~sd~ki~~wDiRs~kvvqeY-----d~hLg-~  344 (503)
T KOG0282|consen  273 FLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDN--QNIFLVGGSDKKIRQWDIRSGKVVQEY-----DRHLG-A  344 (503)
T ss_pred             eeeeecceeeeeeccccceEEEEEecCCCceeeecCCCC--CcEEEEecCCCcEEEEeccchHHHHHH-----Hhhhh-h
Confidence            578999999999999999999887777778999999985  588999999999999999998866554     36667 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      |+++.|-|+ +..|+|++.|++|+||+...
T Consensus       345 i~~i~F~~~-g~rFissSDdks~riWe~~~  373 (503)
T KOG0282|consen  345 ILDITFVDE-GRRFISSSDDKSVRIWENRI  373 (503)
T ss_pred             eeeeEEccC-CceEeeeccCccEEEEEcCC
Confidence            999999995 56899999999999999844

>KOG0278|consensus

Probab=99.73  E-value=5.4e-17  Score=126.51  Aligned_cols=123  Identities=13%  Similarity=0.230  Sum_probs=101.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|+|.++|++||+||.+++..++.+..+..|+|+..+++    ..++|...-+.|++||..+...++.+..      .- 
T Consensus       157 ~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~d----G~ilTia~gssV~Fwdaksf~~lKs~k~------P~-  225 (334)
T KOG0278|consen  157 CILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQD----GRILTIAYGSSVKFWDAKSFGLLKSYKM------PC-  225 (334)
T ss_pred             eEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccC----CCEEEEecCceeEEeccccccceeeccC------cc-
Confidence            467889999999999999999998888899999999986    4677888889999999998765544321      22 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee-eccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA-TLSS  159 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~-~~h~  159 (174)
                      -|.+.+.+|+ ..+|++|++|..++-||+.                            .         ++.+-.+ .||-
T Consensus       226 nV~SASL~P~-k~~fVaGged~~~~kfDy~----------------------------T---------geEi~~~nkgh~  267 (334)
T KOG0278|consen  226 NVESASLHPK-KEFFVAGGEDFKVYKFDYN----------------------------T---------GEEIGSYNKGHF  267 (334)
T ss_pred             ccccccccCC-CceEEecCcceEEEEEecc----------------------------C---------CceeeecccCCC
Confidence            5889999995 5799999999999999991                            1         2234444 8999


Q ss_pred             cceeeeeeCCCCC
Q psy6415         160 QPINSLDWSADKL  172 (174)
Q Consensus       160 ~~V~~l~~spd~~  172 (174)
                      .||.++.|||||.
T Consensus       268 gpVhcVrFSPdGE  280 (334)
T KOG0278|consen  268 GPVHCVRFSPDGE  280 (334)
T ss_pred             CceEEEEECCCCc
Confidence            9999999999985

>KOG0274|consensus

Probab=99.73  E-value=9.7e-17  Score=139.44  Aligned_cols=118  Identities=16%  Similarity=0.165  Sum_probs=102.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .|++|+.|.++++||..+|+|...+. |.+.|.++...+     ..+++||.|.+||+||++++.+     ++++.+|..
T Consensus       263 ~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~-----~~~~sgs~D~tVkVW~v~n~~~-----l~l~~~h~~  332 (537)
T KOG0274|consen  263 KLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP-----FLLVSGSRDNTVKVWDVTNGAC-----LNLLRGHTG  332 (537)
T ss_pred             EEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC-----ceEeeccCCceEEEEeccCcce-----EEEeccccc
Confidence            47899999999999999999988765 778899998775     6789999999999999998654     445667999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       +|++|..+   +.++++|+.||+|++||+                                     .+++++.++.||+
T Consensus       333 -~V~~v~~~---~~~lvsgs~d~~v~VW~~-------------------------------------~~~~cl~sl~gH~  371 (537)
T KOG0274|consen  333 -PVNCVQLD---EPLLVSGSYDGTVKVWDP-------------------------------------RTGKCLKSLSGHT  371 (537)
T ss_pred             -cEEEEEec---CCEEEEEecCceEEEEEh-------------------------------------hhceeeeeecCCc
Confidence             99999997   468999999999999999                                     1357899999999


Q ss_pred             cceeeeeeCC
Q psy6415         160 QPINSLDWSA  169 (174)
Q Consensus       160 ~~V~~l~~sp  169 (174)
                      ..|.++.+.+
T Consensus       372 ~~V~sl~~~~  381 (537)
T KOG0274|consen  372 GRVYSLIVDS  381 (537)
T ss_pred             ceEEEEEecC
Confidence            9999998876

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.72  E-value=2.1e-16  Score=121.81  Aligned_cols=125  Identities=22%  Similarity=0.336  Sum_probs=100.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |++++.||.|++||+++++...... +...|.+++|+|++   +.|++++.|+.|++||+++.+..     ..+..|.. 
T Consensus       150 l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~~~~i~i~d~~~~~~~-----~~~~~~~~-  220 (289)
T cd00200         150 VASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDG---EKLLSSSSDGTIKLWDLSTGKCL-----GTLRGHEN-  220 (289)
T ss_pred             EEEEcCCCcEEEEEccccccceeEecCccccceEEECCCc---CEEEEecCCCcEEEEECCCCcee-----cchhhcCC-
Confidence            5667779999999999877665543 45689999999964   68999999999999999975533     23347888 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.++.|+|+ +.++++++.||.|++||+.                            .         .+.+..+.+|..
T Consensus       221 ~i~~~~~~~~-~~~~~~~~~~~~i~i~~~~----------------------------~---------~~~~~~~~~~~~  262 (289)
T cd00200         221 GVNSVAFSPD-GYLLASGSEDGTIRVWDLR----------------------------T---------GECVQTLSGHTN  262 (289)
T ss_pred             ceEEEEEcCC-CcEEEEEcCCCcEEEEEcC----------------------------C---------ceeEEEccccCC
Confidence            9999999995 7788888889999999991                            1         235667779999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|.+++|+|+++-
T Consensus       263 ~i~~~~~~~~~~~  275 (289)
T cd00200         263 SVTSLAWSPDGKR  275 (289)
T ss_pred             cEEEEEECCCCCE
Confidence            9999999998753

>KOG1407|consensus

Probab=99.72  E-value=1.2e-16  Score=124.90  Aligned_cols=132  Identities=15%  Similarity=0.251  Sum_probs=106.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG------------   68 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~------------   68 (174)
                      ++|+++.|.+|++||+|++++........+=.-+.|+|++   ++++.++.|..|.+.|.|+.+....            
T Consensus        79 ~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g---~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w  155 (313)
T KOG1407|consen   79 LFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDG---EYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISW  155 (313)
T ss_pred             ceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCC---CEEEEecCcccEEEEEecccceeehhcccceeeeeee
Confidence            4799999999999999999998776655554457899975   8999999999999999997532111            


Q ss_pred             ------------------------eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceee
Q psy6415          69 ------------------------FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFR  124 (174)
Q Consensus        69 ------------------------~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~  124 (174)
                                              .++.++++|+. ...+|+|+| ++..||+|+.|-.|.|||+               
T Consensus       156 ~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s-nCicI~f~p-~GryfA~GsADAlvSLWD~---------------  218 (313)
T KOG1407|consen  156 NNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS-NCICIEFDP-DGRYFATGSADALVSLWDV---------------  218 (313)
T ss_pred             cCCCCEEEEecCCceEEEEeccccccccccccCCc-ceEEEEECC-CCceEeeccccceeeccCh---------------
Confidence                                    01335678998 889999999 5679999999999999999               


Q ss_pred             eecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         125 YSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       125 ~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                                    +.        +-.+..+.-+.-||+.|+||.||+.|
T Consensus       219 --------------~E--------LiC~R~isRldwpVRTlSFS~dg~~l  246 (313)
T KOG1407|consen  219 --------------DE--------LICERCISRLDWPVRTLSFSHDGRML  246 (313)
T ss_pred             --------------hH--------hhhheeeccccCceEEEEeccCccee
Confidence                          10        11367788889999999999999865

>KOG0292|consensus

Probab=99.71  E-value=7e-17  Score=142.56  Aligned_cols=148  Identities=16%  Similarity=0.222  Sum_probs=110.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +++||++|-+||+|+.++.+|++++ .|-+=|+.+.|++.   ..+|+++|+|-|||||+..+.+|+     ..+.+|..
T Consensus        65 lFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHhe---yPWIlSASDDQTIrIWNwqsr~~i-----avltGHnH  136 (1202)
T KOG0292|consen   65 LFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHE---YPWILSASDDQTIRIWNWQSRKCI-----AVLTGHNH  136 (1202)
T ss_pred             eEEecCCccEEEEEecccceehhhhccccceeEEeeccCC---CceEEEccCCCeEEEEeccCCceE-----EEEecCce
Confidence            4689999999999999999998774 56677999999986   479999999999999999987754     35569999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc--cc--ccceeeee
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV--PG--SLTLLQEA  155 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~--~~--~~~ll~~~  155 (174)
                       -|.+.+|||. ..+++|||-|.+|++||+ +.+|+..          ..|.+. ...+.|.+...  -+  ..-.-+.+
T Consensus       137 -YVMcAqFhpt-EDlIVSaSLDQTVRVWDi-sGLRkk~----------~~pg~~-e~~~~~~~~~~dLfg~~DaVVK~VL  202 (1202)
T KOG0292|consen  137 -YVMCAQFHPT-EDLIVSASLDQTVRVWDI-SGLRKKN----------KAPGSL-EDQMRGQQGNSDLFGQTDAVVKHVL  202 (1202)
T ss_pred             -EEEeeccCCc-cceEEEecccceEEEEee-cchhccC----------CCCCCc-hhhhhccccchhhcCCcCeeeeeee
Confidence             9999999994 568999999999999999 4344221          111100 00011111100  01  11245788


Q ss_pred             eccccceeeeeeCCC
Q psy6415         156 TLSSQPINSLDWSAD  170 (174)
Q Consensus       156 ~~h~~~V~~l~~spd  170 (174)
                      +||+..||=.+|+|-
T Consensus       203 EGHDRGVNwaAfhpT  217 (1202)
T KOG0292|consen  203 EGHDRGVNWAAFHPT  217 (1202)
T ss_pred             cccccccceEEecCC
Confidence            999999999999993

>KOG0310|consensus

Probab=99.71  E-value=5.9e-17  Score=135.00  Aligned_cols=159  Identities=20%  Similarity=0.261  Sum_probs=115.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|.+.|.|+|+|+++...+. ...|...|..+.|+|.+  ...|++|++|+.+++||+.+..     ....+.+|++
T Consensus        82 LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d--~t~l~s~sDd~v~k~~d~s~a~-----v~~~l~~htD  154 (487)
T KOG0310|consen   82 LLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQD--NTMLVSGSDDKVVKYWDLSTAY-----VQAELSGHTD  154 (487)
T ss_pred             EEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccC--CeEEEecCCCceEEEEEcCCcE-----EEEEecCCcc
Confidence            47899999999999977643332 34578899999999986  4678899999999999999854     2446789999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCC--------cccCCCCCcccc---ccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQR--------TKPDIDDIPMGV---PGS  148 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~dg~~~~~---~~~  148 (174)
                       .|.+.+|+|-++.+++|||.||+|++||..++    +  ..+.++..+.|-+.        .++...|+.+-+   ..-
T Consensus       155 -YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~----~--~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G  227 (487)
T KOG0310|consen  155 -YVRCGDISPANDHIVVTGSYDGKVRLWDTRSL----T--SRVVELNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTG  227 (487)
T ss_pred             -eeEeeccccCCCeEEEecCCCceEEEEEeccC----C--ceeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCC
Confidence             99999999988889999999999999999332    1  12233332223222        222223333222   123


Q ss_pred             cceeeeeeccccceeeeeeCCCCCC
Q psy6415         149 LTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       149 ~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      ++++-.+..|.+.|+||.+.-|+.-
T Consensus       228 ~qll~~~~~H~KtVTcL~l~s~~~r  252 (487)
T KOG0310|consen  228 GQLLTSMFNHNKTVTCLRLASDSTR  252 (487)
T ss_pred             ceehhhhhcccceEEEEEeecCCce
Confidence            3566777779999999999987653

>KOG0289|consensus

Probab=99.71  E-value=3e-16  Score=129.64  Aligned_cols=156  Identities=17%  Similarity=0.188  Sum_probs=114.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecC---CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLK---NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~---~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|++++.||+..+-|++++.+.....+.   -.+.+.+|+|++   ..|++|+.|+.|||||+..+.....     +.+|
T Consensus       317 YllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDg---Lifgtgt~d~~vkiwdlks~~~~a~-----Fpgh  388 (506)
T KOG0289|consen  317 YLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDG---LIFGTGTPDGVVKIWDLKSQTNVAK-----FPGH  388 (506)
T ss_pred             EEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCc---eEEeccCCCceEEEEEcCCcccccc-----CCCC
Confidence            5789999999999999999887655443   348999999985   8899999999999999998765444     4589


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc----------
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG----------  147 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~----------  147 (174)
                      ++ +|.+|+|+- ++.+||+++.|+.|++||+    |+.++ .+.|.....|+.....+|..|.-+++.+          
T Consensus       389 t~-~vk~i~FsE-NGY~Lat~add~~V~lwDL----RKl~n-~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k  461 (506)
T KOG0289|consen  389 TG-PVKAISFSE-NGYWLATAADDGSVKLWDL----RKLKN-FKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKK  461 (506)
T ss_pred             CC-ceeEEEecc-CceEEEEEecCCeEEEEEe----hhhcc-cceeeccccccceeEEEcCCCCeEEeecceeEEEEEec
Confidence            99 999999998 7899999999999999999    54432 2223333333322333555555554432          


Q ss_pred             ---ccceeeeeeccccceeeeeeCCCC
Q psy6415         148 ---SLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       148 ---~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                         +-..+.++..|+...+.+.|.-+.
T Consensus       462 ~~k~W~~~~~~~~~sg~st~v~Fg~~a  488 (506)
T KOG0289|consen  462 KTKSWTEIKELADHSGLSTGVRFGEHA  488 (506)
T ss_pred             ccccceeeehhhhcccccceeeecccc
Confidence               224556666777777777776544

>KOG0275|consensus

Probab=99.70  E-value=9.8e-18  Score=134.78  Aligned_cols=126  Identities=19%  Similarity=0.255  Sum_probs=107.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe---------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET---------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY   71 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~---------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~   71 (174)
                      +|++||.||-|.+||..+|++....         -+...|.+++|+++.   ..||+|+.||.||+|-++++.|++.|. 
T Consensus       227 yLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDs---EMlAsGsqDGkIKvWri~tG~ClRrFd-  302 (508)
T KOG0275|consen  227 YLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDS---EMLASGSQDGKIKVWRIETGQCLRRFD-  302 (508)
T ss_pred             eEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccH---HHhhccCcCCcEEEEEEecchHHHHhh-
Confidence            5899999999999999998764321         235789999999974   789999999999999999999887664 


Q ss_pred             eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccce
Q psy6415          72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTL  151 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~l  151 (174)
                         ++|+. .|.+++||.++. .+.++|.|.+|++--+                                     +.+++
T Consensus       303 ---rAHtk-Gvt~l~FSrD~S-qiLS~sfD~tvRiHGl-------------------------------------KSGK~  340 (508)
T KOG0275|consen  303 ---RAHTK-GVTCLSFSRDNS-QILSASFDQTVRIHGL-------------------------------------KSGKC  340 (508)
T ss_pred             ---hhhcc-CeeEEEEccCcc-hhhcccccceEEEecc-------------------------------------ccchh
Confidence               58998 999999999654 5688999999999877                                     12468


Q ss_pred             eeeeeccccceeeeeeCCCCC
Q psy6415         152 LQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       152 l~~~~~h~~~V~~l~~spd~~  172 (174)
                      +.++.||++-|+...|++||.
T Consensus       341 LKEfrGHsSyvn~a~ft~dG~  361 (508)
T KOG0275|consen  341 LKEFRGHSSYVNEATFTDDGH  361 (508)
T ss_pred             HHHhcCccccccceEEcCCCC
Confidence            999999999999999999985

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.70  E-value=9.2e-16  Score=118.21  Aligned_cols=125  Identities=18%  Similarity=0.262  Sum_probs=99.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .|++++.||.|++||+++++..... .+...|.++.|+|+   ++.+++++.|+.|++||+++.+..     ..+..|..
T Consensus        65 ~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~  136 (289)
T cd00200          65 YLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPD---GRILSSSSRDKTIKVWDVETGKCL-----TTLRGHTD  136 (289)
T ss_pred             EEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCC---CCEEEEecCCCeEEEEECCCcEEE-----EEeccCCC
Confidence            3789999999999999987655443 35568999999986   367788888999999999965432     34457888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.+++|+|+ +.++++++.||.|++||+.                            .         .+++..+..|.
T Consensus       137 -~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~----------------------------~---------~~~~~~~~~~~  177 (289)
T cd00200         137 -WVNSVAFSPD-GTFVASSSQDGTIKLWDLR----------------------------T---------GKCVATLTGHT  177 (289)
T ss_pred             -cEEEEEEcCc-CCEEEEEcCCCcEEEEEcc----------------------------c---------cccceeEecCc
Confidence             9999999995 6688888889999999991                            1         23466667888


Q ss_pred             cceeeeeeCCCCC
Q psy6415         160 QPINSLDWSADKL  172 (174)
Q Consensus       160 ~~V~~l~~spd~~  172 (174)
                      .+|.++.|+|+++
T Consensus       178 ~~i~~~~~~~~~~  190 (289)
T cd00200         178 GEVNSVAFSPDGE  190 (289)
T ss_pred             cccceEEECCCcC
Confidence            8999999999874

>KOG0302|consensus

Probab=99.70  E-value=1.1e-16  Score=130.23  Aligned_cols=130  Identities=18%  Similarity=0.314  Sum_probs=101.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEE----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      |+||..-+.|++|...++.-..    ...|...|-.++|+|..  .+.|+|||.|++|||||+|....-..  + ..++|
T Consensus       227 LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE--~~vfaScS~DgsIrIWDiRs~~~~~~--~-~~kAh  301 (440)
T KOG0302|consen  227 LLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE--DGVFASCSCDGSIRIWDIRSGPKKAA--V-STKAH  301 (440)
T ss_pred             cccCccccceEeeeeccCceeecCccccccccchhhhccCCcc--CceEEeeecCceEEEEEecCCCccce--e-Eeecc
Confidence            5677777889999988875322    23477889999999964  57899999999999999998632111  1 22699


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .+ .|+-|+|+..-+ +||+|+.||+++|||+    |.-+                     .         ++.+.+|.-
T Consensus       302 ~s-DVNVISWnr~~~-lLasG~DdGt~~iwDL----R~~~---------------------~---------~~pVA~fk~  345 (440)
T KOG0302|consen  302 NS-DVNVISWNRREP-LLASGGDDGTLSIWDL----RQFK---------------------S---------GQPVATFKY  345 (440)
T ss_pred             CC-ceeeEEccCCcc-eeeecCCCceEEEEEh----hhcc---------------------C---------CCcceeEEe
Confidence            99 999999998544 9999999999999999    2110                     1         135788999


Q ss_pred             cccceeeeeeCCCCC
Q psy6415         158 SSQPINSLDWSADKL  172 (174)
Q Consensus       158 h~~~V~~l~~spd~~  172 (174)
                      |..||.+|.|+|...
T Consensus       346 Hk~pItsieW~p~e~  360 (440)
T KOG0302|consen  346 HKAPITSIEWHPHED  360 (440)
T ss_pred             ccCCeeEEEeccccC
Confidence            999999999999753

>KOG0316|consensus

Probab=99.69  E-value=3.3e-16  Score=121.24  Aligned_cols=100  Identities=13%  Similarity=0.151  Sum_probs=86.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .++++.|.+||||+...+.++.+.. |...|..++.+.+.   ..+++|+.|..|.+||+.+++..     ..+.+|-+ 
T Consensus        32 ~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dn---skf~s~GgDk~v~vwDV~TGkv~-----Rr~rgH~a-  102 (307)
T KOG0316|consen   32 CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDN---SKFASCGGDKAVQVWDVNTGKVD-----RRFRGHLA-  102 (307)
T ss_pred             EEEcCCCceEEeecccccceeeeecCCCceeeeccccccc---cccccCCCCceEEEEEcccCeee-----eecccccc-
Confidence            4678889999999999999887754 67789988887653   78999999999999999997644     45579999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .|+.|+|+. ...+++|||.|.+|++||-.+
T Consensus       103 qVNtV~fNe-esSVv~SgsfD~s~r~wDCRS  132 (307)
T KOG0316|consen  103 QVNTVRFNE-ESSVVASGSFDSSVRLWDCRS  132 (307)
T ss_pred             eeeEEEecC-cceEEEeccccceeEEEEccc
Confidence            999999998 567999999999999999944

>KOG0275|consensus

Probab=99.69  E-value=2.4e-17  Score=132.58  Aligned_cols=99  Identities=18%  Similarity=0.395  Sum_probs=89.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      |||+|+.||.||+|.+++|+|+..+  .|..+|++++|++++   ..++++|.|-++||--++.++++++|     ++|+
T Consensus       277 MlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~---SqiLS~sfD~tvRiHGlKSGK~LKEf-----rGHs  348 (508)
T KOG0275|consen  277 MLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDN---SQILSASFDQTVRIHGLKSGKCLKEF-----RGHS  348 (508)
T ss_pred             HhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCc---chhhcccccceEEEeccccchhHHHh-----cCcc
Confidence            6899999999999999999987553  588999999999974   78999999999999999998876655     6999


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . -|+.+.|.+ ++..++|||.||+|++|+.
T Consensus       349 S-yvn~a~ft~-dG~~iisaSsDgtvkvW~~  377 (508)
T KOG0275|consen  349 S-YVNEATFTD-DGHHIISASSDGTVKVWHG  377 (508)
T ss_pred             c-cccceEEcC-CCCeEEEecCCccEEEecC
Confidence            9 999999999 5678899999999999999

>KOG0308|consensus

Probab=99.68  E-value=3.2e-16  Score=134.57  Aligned_cols=123  Identities=16%  Similarity=0.280  Sum_probs=101.4

Q ss_pred             CEEEEecCCcEEEEECCCCCe--EEEe----------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL--KWET----------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG   68 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~--~~~~----------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~   68 (174)
                      ++|||+-|+.|+|||++++..  ....          .+..+|+++|-++.+   ..|++|+..+-|++||.|+.+.   
T Consensus       132 lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~---t~ivsGgtek~lr~wDprt~~k---  205 (735)
T KOG0308|consen  132 LVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG---TIIVSGGTEKDLRLWDPRTCKK---  205 (735)
T ss_pred             eEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc---eEEEecCcccceEEeccccccc---
Confidence            479999999999999998732  1111          345789999999864   7899999999999999998652   


Q ss_pred             eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccc
Q psy6415          69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGS  148 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~  148 (174)
                        +..+++|.. -|..+-.++ ++..+.|||+||+|+|||+                                     ++
T Consensus       206 --imkLrGHTd-NVr~ll~~d-DGt~~ls~sSDgtIrlWdL-------------------------------------gq  244 (735)
T KOG0308|consen  206 --IMKLRGHTD-NVRVLLVND-DGTRLLSASSDGTIRLWDL-------------------------------------GQ  244 (735)
T ss_pred             --eeeeecccc-ceEEEEEcC-CCCeEeecCCCceEEeeec-------------------------------------cc
Confidence              445679999 999999999 5678899999999999999                                     12


Q ss_pred             cceeeeeeccccceeeeeeCCC
Q psy6415         149 LTLLQEATLSSQPINSLDWSAD  170 (174)
Q Consensus       149 ~~ll~~~~~h~~~V~~l~~spd  170 (174)
                      .+.++++..|...|+++.-+|+
T Consensus       245 QrCl~T~~vH~e~VWaL~~~~s  266 (735)
T KOG0308|consen  245 QRCLATYIVHKEGVWALQSSPS  266 (735)
T ss_pred             cceeeeEEeccCceEEEeeCCC
Confidence            2468889999999999988875

>KOG0281|consensus

Probab=99.68  E-value=5.2e-17  Score=131.47  Aligned_cols=150  Identities=15%  Similarity=0.259  Sum_probs=109.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++||..|++|||||.++..+... ..|.+.|-++.|..     ..|++||.|.+|+|||+++++++..     +-.|.. 
T Consensus       210 iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~-----rviisGSSDsTvrvWDv~tge~l~t-----lihHce-  278 (499)
T KOG0281|consen  210 IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE-----RVIVSGSSDSTVRVWDVNTGEPLNT-----LIHHCE-  278 (499)
T ss_pred             hhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc-----eEEEecCCCceEEEEeccCCchhhH-----Hhhhcc-
Confidence            68999999999999998887665 45788999999985     6899999999999999999887643     347888 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeee------ecCCCCCCcccCCCCC-cccc--ccccce
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRY------SSNYPTQRTKPDIDDI-PMGV--PGSLTL  151 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~dg~-~~~~--~~~~~l  151 (174)
                      .|..+.|+-   .+++|+|.|.+|.+||+.+...  ...-.+++.      .+.|. .+.+....|. .+-+  ..++++
T Consensus       279 aVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~--it~rrVLvGHrAaVNvVdfd-~kyIVsASgDRTikvW~~st~ef  352 (499)
T KOG0281|consen  279 AVLHLRFSN---GYMVTCSKDRSIAVWDMASPTD--ITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEF  352 (499)
T ss_pred             eeEEEEEeC---CEEEEecCCceeEEEeccCchH--HHHHHHHhhhhhheeeeccc-cceEEEecCCceEEEEeccceee
Confidence            999999984   4889999999999999954111  000001111      11221 1112112232 2222  477899


Q ss_pred             eeeeeccccceeeeeeC
Q psy6415         152 LQEATLSSQPINSLDWS  168 (174)
Q Consensus       152 l~~~~~h~~~V~~l~~s  168 (174)
                      +.++.||+..|-++.|.
T Consensus       353 vRtl~gHkRGIAClQYr  369 (499)
T KOG0281|consen  353 VRTLNGHKRGIACLQYR  369 (499)
T ss_pred             ehhhhcccccceehhcc
Confidence            99999999999998875

>KOG0647|consensus

Probab=99.67  E-value=8.2e-16  Score=122.27  Aligned_cols=99  Identities=18%  Similarity=0.281  Sum_probs=82.5

Q ss_pred             CEEEEecCCcEEEEECCC-CCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKT-MSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~-~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|++||.||+||+|+++. |..+..  ..+...|-+++|+.++   ..+++|+.|+.+|+||+.+++.      .....|
T Consensus        42 ~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddg---skVf~g~~Dk~~k~wDL~S~Q~------~~v~~H  112 (347)
T KOG0647|consen   42 LLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDG---SKVFSGGCDKQAKLWDLASGQV------SQVAAH  112 (347)
T ss_pred             eEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCC---ceEEeeccCCceEEEEccCCCe------eeeeec
Confidence            477999999999999975 454432  3567889999999864   8999999999999999998743      234589


Q ss_pred             CcCcEEEEEEcCCCCC--EEEEEcCCCcEEEEecc
Q psy6415          78 KATTVWAAKHLPQNRD--LFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~--~las~s~Dg~V~lWd~~  110 (174)
                      .+ +|..++|-+ +..  +|+|||.|++||+||..
T Consensus       113 d~-pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R  145 (347)
T KOG0647|consen  113 DA-PVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTR  145 (347)
T ss_pred             cc-ceeEEEEec-CCCcceeEecccccceeecccC
Confidence            98 999999987 444  89999999999999993

>KOG0313|consensus

Probab=99.67  E-value=6.3e-16  Score=125.90  Aligned_cols=165  Identities=14%  Similarity=0.157  Sum_probs=112.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEE-----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc------------
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW-----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH------------   64 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~-----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~------------   64 (174)
                      +++|+.|.++++|-++-+....     ...|...|-+|+.++++   ..+++||.|.+|+||+..+..            
T Consensus       162 fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sg---tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rr  238 (423)
T KOG0313|consen  162 FVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSG---TRFCSGSWDTMLKIWSVETDEEDELESSSNRRR  238 (423)
T ss_pred             EEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCC---CeEEeecccceeeecccCCCccccccccchhhh
Confidence            7899999999999998765421     23688999999999864   899999999999999943321            


Q ss_pred             --------cccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCCcc
Q psy6415          65 --------REKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTK  135 (174)
Q Consensus        65 --------~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~  135 (174)
                              .....++.++.+|.. +|.+|.|++  ...+.|+|.|.+|+.||+++......-.+.+--...+| |...-+
T Consensus       239 k~~~~~~~~~~r~P~vtl~GHt~-~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll  315 (423)
T KOG0313|consen  239 KKQKREKEGGTRTPLVTLEGHTE-PVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLL  315 (423)
T ss_pred             hhhhhhhcccccCceEEeccccc-ceeeEEEcC--CCceEeecccceEEEEEeecccceeeeecCcceeEeeccccccee
Confidence                    011123456789999 999999998  45889999999999999976332222112222223344 444333


Q ss_pred             cC--CC-CCcccc--cccc-ceeeeeeccccceeeeeeCCCCC
Q psy6415         136 PD--ID-DIPMGV--PGSL-TLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       136 ~~--~d-g~~~~~--~~~~-~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      ++  .| -.++..  .+.+ -..++|.||+..|.++.|||-..
T Consensus       316 ~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~  358 (423)
T KOG0313|consen  316 ASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNE  358 (423)
T ss_pred             eecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCc
Confidence            33  11 000000  1112 25789999999999999999643

>KOG0647|consensus

Probab=99.67  E-value=7.4e-16  Score=122.53  Aligned_cols=62  Identities=16%  Similarity=0.157  Sum_probs=53.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH   64 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~   64 (174)
                      +++|+.|+.+|+|||.+++....-.|..+|..+.|-+.. ....|+|||.|++||.||.|...
T Consensus        87 Vf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~-~~~cl~TGSWDKTlKfWD~R~~~  148 (347)
T KOG0647|consen   87 VFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGM-NYQCLVTGSWDKTLKFWDTRSSN  148 (347)
T ss_pred             EEeeccCCceEEEEccCCCeeeeeecccceeEEEEecCC-CcceeEecccccceeecccCCCC
Confidence            689999999999999999888777788999999987642 12468999999999999999753

>KOG0296|consensus

Probab=99.67  E-value=5e-16  Score=125.92  Aligned_cols=83  Identities=19%  Similarity=0.218  Sum_probs=70.0

Q ss_pred             CEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccccccee
Q psy6415          44 NKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIF  123 (174)
Q Consensus        44 ~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~  123 (174)
                      ...|+|+.||+|.|||+.....++      +-.|+. +|..+.|-+ . .+|+||+.||+|++||.    |         
T Consensus       299 pL~A~G~vdG~i~iyD~a~~~~R~------~c~he~-~V~~l~w~~-t-~~l~t~c~~g~v~~wDa----R---------  356 (399)
T KOG0296|consen  299 PLAACGSVDGTIAIYDLAASTLRH------ICEHED-GVTKLKWLN-T-DYLLTACANGKVRQWDA----R---------  356 (399)
T ss_pred             chhhcccccceEEEEecccchhhe------eccCCC-ceEEEEEcC-c-chheeeccCceEEeeec----c---------
Confidence            356889999999999998765433      237888 999999998 4 46788999999999999    1         


Q ss_pred             eeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         124 RYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       124 ~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                                              +++|++++.||+++|.+|+++||++
T Consensus       357 ------------------------tG~l~~~y~GH~~~Il~f~ls~~~~  381 (399)
T KOG0296|consen  357 ------------------------TGQLKFTYTGHQMGILDFALSPQKR  381 (399)
T ss_pred             ------------------------ccceEEEEecCchheeEEEEcCCCc
Confidence                                    2468999999999999999999975

>KOG1036|consensus

Probab=99.64  E-value=2.1e-15  Score=120.04  Aligned_cols=103  Identities=27%  Similarity=0.441  Sum_probs=77.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc---------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR---------------   65 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~---------------   65 (174)
                      +++||++|++||+||.|.............|++++.+.     +.|+.|+.|..|.+||+|+...               
T Consensus       108 ~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g-----~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~  182 (323)
T KOG1036|consen  108 CVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSG-----NRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRC  182 (323)
T ss_pred             eEEEcccCccEEEEeccccccccccccCceEEEEeccC-----CEEEEeecCceEEEEEcccccchhhhccccceeEEEE
Confidence            47899999999999999755544444456799998764     8899999999999999998531               


Q ss_pred             c------cceeeee----------------------ecccCc--------CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          66 E------KGFAYLS----------------------EKAHKA--------TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        66 ~------~~~~~~~----------------------~~~h~~--------~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +      .+|...+                      ++.|..        .+|++++|||- -.+|||||.||.|.+||+
T Consensus       183 v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~-~~tfaTgGsDG~V~~Wd~  261 (323)
T KOG1036|consen  183 VALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPI-HGTFATGGSDGIVNIWDL  261 (323)
T ss_pred             EEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccc-cceEEecCCCceEEEccC
Confidence            0      1111111                      222321        27899999996 568999999999999999

>KOG0306|consensus

Probab=99.63  E-value=5.3e-15  Score=128.87  Aligned_cols=158  Identities=18%  Similarity=0.220  Sum_probs=111.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |+||+ .+.||||+..+.+++.+.... -+-+..|-|.+   +++++|...|.+.|||+.....+     .++++|.+ .
T Consensus       388 ~~Sga-~~SikiWn~~t~kciRTi~~~-y~l~~~Fvpgd---~~Iv~G~k~Gel~vfdlaS~~l~-----Eti~AHdg-a  456 (888)
T KOG0306|consen  388 LASGA-GESIKIWNRDTLKCIRTITCG-YILASKFVPGD---RYIVLGTKNGELQVFDLASASLV-----ETIRAHDG-A  456 (888)
T ss_pred             eeecC-CCcEEEEEccCcceeEEeccc-cEEEEEecCCC---ceEEEeccCCceEEEEeehhhhh-----hhhhcccc-c
Confidence            45554 589999999999998876543 45666788864   78999999999999999986533     35579999 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC------CCC-C-cccCCCCCcccc--------
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY------PTQ-R-TKPDIDDIPMGV--------  145 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~------~~~-~-~~~~~dg~~~~~--------  145 (174)
                      ||+++.+|+ +.-|+|||.|.+|++||++....  .|+.+.-++....      ++. . ....+||.-+.+        
T Consensus       457 IWsi~~~pD-~~g~vT~saDktVkfWdf~l~~~--~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVk  533 (888)
T KOG0306|consen  457 IWSISLSPD-NKGFVTGSADKTVKFWDFKLVVS--VPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVK  533 (888)
T ss_pred             eeeeeecCC-CCceEEecCCcEEEEEeEEEEec--cCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEE
Confidence            999999995 55789999999999999944222  2222211111100      000 0 002245544433        


Q ss_pred             ---ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         146 ---PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       146 ---~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                         ..+.++.-++-||.-||.+++.|||.+-
T Consensus       534 VyflDtlKFflsLYGHkLPV~smDIS~DSkl  564 (888)
T KOG0306|consen  534 VYFLDTLKFFLSLYGHKLPVLSMDISPDSKL  564 (888)
T ss_pred             EEEecceeeeeeecccccceeEEeccCCcCe
Confidence               1445778889999999999999999863

>KOG0310|consensus

Probab=99.63  E-value=5.8e-15  Score=123.19  Aligned_cols=124  Identities=18%  Similarity=0.167  Sum_probs=98.0

Q ss_pred             CEEEEecCCcEEEEECCCC-CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTM-SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~-~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +++||+.||+||+||+|+. ..+..++|..+|.+|-|-|.   +..||+++. +.|||||+-++..    .+.....|..
T Consensus       168 ivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lps---gs~iasAgG-n~vkVWDl~~G~q----ll~~~~~H~K  239 (487)
T KOG0310|consen  168 IVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPS---GSLIASAGG-NSVKVWDLTTGGQ----LLTSMFNHNK  239 (487)
T ss_pred             EEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCC---CCEEEEcCC-CeEEEEEecCCce----ehhhhhcccc
Confidence            5899999999999999987 66677889999999999985   377887764 5799999986432    1222335888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.|+++.. ++..|.|||-||.||+||+                             +        ..+.++++. -.
T Consensus       240 -tVTcL~l~s-~~~rLlS~sLD~~VKVfd~-----------------------------t--------~~Kvv~s~~-~~  279 (487)
T KOG0310|consen  240 -TVTCLRLAS-DSTRLLSGSLDRHVKVFDT-----------------------------T--------NYKVVHSWK-YP  279 (487)
T ss_pred             -eEEEEEeec-CCceEeecccccceEEEEc-----------------------------c--------ceEEEEeee-cc
Confidence             999999998 5578999999999999998                             0        134566663 36


Q ss_pred             cceeeeeeCCCCC
Q psy6415         160 QPINSLDWSADKL  172 (174)
Q Consensus       160 ~~V~~l~~spd~~  172 (174)
                      .||.||+.|||++
T Consensus       280 ~pvLsiavs~dd~  292 (487)
T KOG0310|consen  280 GPVLSIAVSPDDQ  292 (487)
T ss_pred             cceeeEEecCCCc
Confidence            8899999999875

>KOG0274|consensus

Probab=99.63  E-value=2.8e-15  Score=130.41  Aligned_cols=95  Identities=18%  Similarity=0.244  Sum_probs=84.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++|+.|.+||+||++++.++.... |...|++|..+.     +.+++|+.|++|++||+++.+++     +++.+|.. 
T Consensus       304 ~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~-----~~lvsgs~d~~v~VW~~~~~~cl-----~sl~gH~~-  372 (537)
T KOG0274|consen  304 LVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDE-----PLLVSGSYDGTVKVWDPRTGKCL-----KSLSGHTG-  372 (537)
T ss_pred             EeeccCCceEEEEeccCcceEEEeccccccEEEEEecC-----CEEEEEecCceEEEEEhhhceee-----eeecCCcc-
Confidence            6788999999999999999988776 889999999983     79999999999999999987754     45679999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|+++.+.+.  ..+.+|+.|++|++||+
T Consensus       373 ~V~sl~~~~~--~~~~Sgs~D~~IkvWdl  399 (537)
T KOG0274|consen  373 RVYSLIVDSE--NRLLSGSLDTTIKVWDL  399 (537)
T ss_pred             eEEEEEecCc--ceEEeeeeccceEeecC
Confidence            9999988763  68899999999999999

>KOG0645|consensus

Probab=99.62  E-value=6.1e-15  Score=115.90  Aligned_cols=110  Identities=13%  Similarity=0.177  Sum_probs=86.5

Q ss_pred             eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcE
Q psy6415          25 TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSL  104 (174)
Q Consensus        25 ~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V  104 (174)
                      ..|++.|.+++|+|-.  |..|||+|.|+.||||+....... ......-.+|+. .|.+|+|+|. +++||+||.|.++
T Consensus        11 ~gh~~r~W~~awhp~~--g~ilAscg~Dk~vriw~~~~~~s~-~ck~vld~~hkr-sVRsvAwsp~-g~~La~aSFD~t~   85 (312)
T KOG0645|consen   11 SGHKDRVWSVAWHPGK--GVILASCGTDKAVRIWSTSSGDSW-TCKTVLDDGHKR-SVRSVAWSPH-GRYLASASFDATV   85 (312)
T ss_pred             cCCCCcEEEEEeccCC--ceEEEeecCCceEEEEecCCCCcE-EEEEeccccchh-eeeeeeecCC-CcEEEEeeccceE
Confidence            3467789999999951  468999999999999999842210 011112247988 9999999995 5699999999999


Q ss_pred             EEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         105 NLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       105 ~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      .||.-                            +||+       .+.+.+++||...|.+++||++|..|
T Consensus        86 ~Iw~k----------------------------~~~e-------fecv~~lEGHEnEVK~Vaws~sG~~L  120 (312)
T KOG0645|consen   86 VIWKK----------------------------EDGE-------FECVATLEGHENEVKCVAWSASGNYL  120 (312)
T ss_pred             EEeec----------------------------CCCc-------eeEEeeeeccccceeEEEEcCCCCEE
Confidence            99987                            1332       35699999999999999999999754

>KOG0772|consensus

Probab=99.62  E-value=6.1e-15  Score=124.20  Aligned_cols=159  Identities=13%  Similarity=0.231  Sum_probs=103.4

Q ss_pred             EEEEecCCcEEEEECCCCCeE-EEeec------CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLK-WETNL------KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~-~~~~~------~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      ++|++.||+++|||+..-+.+ ..+.+      .-.+.+-+|+|++   ..||+|..||.|.+||.+.......+.+  -
T Consensus       284 FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg---~~iAagc~DGSIQ~W~~~~~~v~p~~~v--k  358 (641)
T KOG0772|consen  284 FLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDG---KLIAAGCLDGSIQIWDKGSRTVRPVMKV--K  358 (641)
T ss_pred             eEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCc---chhhhcccCCceeeeecCCcccccceEe--e
Confidence            579999999999998654321 11111      2347888999975   8899999999999999876543322222  2


Q ss_pred             cccCc-CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeee--------ecCC-CCCCcccC----CCC
Q psy6415          75 KAHKA-TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRY--------SSNY-PTQRTKPD----IDD  140 (174)
Q Consensus        75 ~~h~~-~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~----~dg  140 (174)
                      .+|.. +.|.+|+||+ ++++|+|-|.|+++|+||+    |.-+..-..+..        ...| |+.+.+..    +.|
T Consensus       359 ~AH~~g~~Itsi~FS~-dg~~LlSRg~D~tLKvWDL----rq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~  433 (641)
T KOG0772|consen  359 DAHLPGQDITSISFSY-DGNYLLSRGFDDTLKVWDL----RQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNG  433 (641)
T ss_pred             eccCCCCceeEEEecc-ccchhhhccCCCceeeeec----cccccchhhhcCCCccCCCCccccCCCceEEEecccccCC
Confidence            46654 2799999999 5679999999999999999    422211111221        1223 44333221    112


Q ss_pred             Ccccc-----ccccceeeeeeccccceeeeeeCCC
Q psy6415         141 IPMGV-----PGSLTLLQEATLSSQPINSLDWSAD  170 (174)
Q Consensus       141 ~~~~~-----~~~~~ll~~~~~h~~~V~~l~~spd  170 (174)
                      ...+.     .-+.+++.++.-....|-.+.|+|-
T Consensus       434 ~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Whpk  468 (641)
T KOG0772|consen  434 MTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPK  468 (641)
T ss_pred             CCCceEEEEeccceeeEEEecCCCceEEEEeecch
Confidence            21111     1334667777778888999999983

>KOG0641|consensus

Probab=99.61  E-value=8.9e-15  Score=113.02  Aligned_cols=99  Identities=17%  Similarity=0.290  Sum_probs=85.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee---c-----CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN---L-----KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~---~-----~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      |+|+|+.|.+|++||+|-..++....   +     ...|.+|+.+|.   +..|++|-.|....+||+|.+..++     
T Consensus       196 m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdps---grll~sg~~dssc~lydirg~r~iq-----  267 (350)
T KOG0641|consen  196 MFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPS---GRLLASGHADSSCMLYDIRGGRMIQ-----  267 (350)
T ss_pred             EEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCC---cceeeeccCCCceEEEEeeCCceee-----
Confidence            68999999999999999888765532   1     256999999996   4899999999999999999976544     


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..|+. .|.+|+|+| +..++.||+.|-.|++=|+
T Consensus       268 ~f~phsa-dir~vrfsp-~a~yllt~syd~~ikltdl  302 (350)
T KOG0641|consen  268 RFHPHSA-DIRCVRFSP-GAHYLLTCSYDMKIKLTDL  302 (350)
T ss_pred             eeCCCcc-ceeEEEeCC-CceEEEEecccceEEEeec
Confidence            4458888 999999999 7789999999999999999

>KOG0267|consensus

Probab=99.61  E-value=1e-15  Score=132.73  Aligned_cols=98  Identities=16%  Similarity=0.256  Sum_probs=84.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .|+|+.|..+++||+|...|.+... |...|..++|+|+|   .+++++++|.+++|||++.++..+     .++.|+. 
T Consensus       127 ~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~G---r~v~~g~ed~tvki~d~~agk~~~-----ef~~~e~-  197 (825)
T KOG0267|consen  127 FASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDG---RWVASGGEDNTVKIWDLTAGKLSK-----EFKSHEG-  197 (825)
T ss_pred             eccccccccceehhhhccCceeeecCCcceeEEEeecCCC---ceeeccCCcceeeeeccccccccc-----ccccccc-
Confidence            4789999999999999777766544 66789999999975   899999999999999998876443     4468988 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++.|+| ...++++||.|++|++||+
T Consensus       198 ~v~sle~hp-~e~Lla~Gs~d~tv~f~dl  225 (825)
T KOG0267|consen  198 KVQSLEFHP-LEVLLAPGSSDRTVRFWDL  225 (825)
T ss_pred             cccccccCc-hhhhhccCCCCceeeeecc
Confidence            999999999 4679999999999999999

>KOG0283|consensus

Probab=99.61  E-value=1e-14  Score=127.88  Aligned_cols=99  Identities=10%  Similarity=0.073  Sum_probs=85.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|+|+|.|.|||||++....|+..+.|.+-|++|+|+|.+  .+++++||.|+.||||++...+...      +.--.. 
T Consensus       382 fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvD--DryFiSGSLD~KvRiWsI~d~~Vv~------W~Dl~~-  452 (712)
T KOG0283|consen  382 FLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVD--DRYFISGSLDGKVRLWSISDKKVVD------WNDLRD-  452 (712)
T ss_pred             eeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccC--CCcEeecccccceEEeecCcCeeEe------ehhhhh-
Confidence            5899999999999999999999999999999999999975  5899999999999999998754321      111124 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -|.+|.|.|+ ++..+.|+.+|.+++|+.
T Consensus       453 lITAvcy~Pd-Gk~avIGt~~G~C~fY~t  480 (712)
T KOG0283|consen  453 LITAVCYSPD-GKGAVIGTFNGYCRFYDT  480 (712)
T ss_pred             hheeEEeccC-CceEEEEEeccEEEEEEc
Confidence            7999999996 667788999999999999

>KOG0268|consensus

Probab=99.61  E-value=6.2e-15  Score=119.75  Aligned_cols=159  Identities=13%  Similarity=0.164  Sum_probs=108.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce-----------
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF-----------   69 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~-----------   69 (174)
                      +|||+.||.|+|||+.+..+...+. |.+-|..|.++.     +.+++++.|++||.|-+... +.+.+           
T Consensus        82 ~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-----~~~~tvgdDKtvK~wk~~~~-p~~tilg~s~~~gIdh  155 (433)
T KOG0268|consen   82 VASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-----TSFFTVGDDKTVKQWKIDGP-PLHTILGKSVYLGIDH  155 (433)
T ss_pred             hhccccCceEEEEehhhhhhhheeecccCceeeEEecc-----cceEEecCCcceeeeeccCC-cceeeecccccccccc
Confidence            6899999999999999888776654 556799999985     57999999999999985542 11111           


Q ss_pred             -----------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceee--
Q psy6415          70 -----------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFR--  124 (174)
Q Consensus        70 -----------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~--  124 (174)
                                             ++..+...-+ .|.++.|+|-...+||+|++|++|.|||+    |...|..++-.  
T Consensus       156 ~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~D-ti~svkfNpvETsILas~~sDrsIvLyD~----R~~~Pl~KVi~~m  230 (433)
T KOG0268|consen  156 HRKNSVFATCGEQIDIWDEQRDNPVSSMSWGAD-SISSVKFNPVETSILASCASDRSIVLYDL----RQASPLKKVILTM  230 (433)
T ss_pred             ccccccccccCceeeecccccCCccceeecCCC-ceeEEecCCCcchheeeeccCCceEEEec----ccCCccceeeeec
Confidence                                   1111112223 68899999988889999999999999999    54444333211  


Q ss_pred             --eecCC-CCCCcc--cCCCCCccccc---cccceeeeeeccccceeeeeeCCCCC
Q psy6415         125 --YSSNY-PTQRTK--PDIDDIPMGVP---GSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       125 --~~~~~-~~~~~~--~~~dg~~~~~~---~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                        -..+| |++-..  +++|- -++.-   ...+.++.+.+|-+.|.+++|||-|+
T Consensus       231 RTN~IswnPeafnF~~a~ED~-nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~  285 (433)
T KOG0268|consen  231 RTNTICWNPEAFNFVAANEDH-NLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQ  285 (433)
T ss_pred             cccceecCccccceeeccccc-cceehhhhhhcccchhhcccceeEEEeccCCCcc
Confidence              12344 422111  22331 11110   12246889999999999999999886

>KOG0292|consensus

Probab=99.60  E-value=3.7e-15  Score=131.84  Aligned_cols=121  Identities=15%  Similarity=0.194  Sum_probs=102.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |.++-..|.|++||.|-+.++..+ .|.++|+.|+|+|.   +..+++|++|-+||+|+..+..|+     .++.+|-+ 
T Consensus        24 ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~---qplFVSGGDDykIkVWnYk~rrcl-----ftL~GHlD-   94 (1202)
T KOG0292|consen   24 ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPT---QPLFVSGGDDYKIKVWNYKTRRCL-----FTLLGHLD-   94 (1202)
T ss_pred             EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCC---CCeEEecCCccEEEEEecccceeh-----hhhccccc-
Confidence            678889999999999999887665 47788999999996   488999999999999999987654     45679999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      -|..+.||+.- ..+.|||.|.||+||++++                                     .+.+..++||..
T Consensus        95 YVRt~~FHhey-PWIlSASDDQTIrIWNwqs-------------------------------------r~~iavltGHnH  136 (1202)
T KOG0292|consen   95 YVRTVFFHHEY-PWILSASDDQTIRIWNWQS-------------------------------------RKCIAVLTGHNH  136 (1202)
T ss_pred             eeEEeeccCCC-ceEEEccCCCeEEEEeccC-------------------------------------CceEEEEecCce
Confidence            99999999954 5889999999999999921                                     246777777777


Q ss_pred             ceeeeeeCC
Q psy6415         161 PINSLDWSA  169 (174)
Q Consensus       161 ~V~~l~~sp  169 (174)
                      -|.+-.|+|
T Consensus       137 YVMcAqFhp  145 (1202)
T KOG0292|consen  137 YVMCAQFHP  145 (1202)
T ss_pred             EEEeeccCC
Confidence            777777777

>KOG1332|consensus

Probab=99.60  E-value=2.7e-15  Score=116.58  Aligned_cols=130  Identities=13%  Similarity=0.175  Sum_probs=100.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE---EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc-ccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW---ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL-HREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~---~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~-~~~~~~~~~~~~~   76 (174)
                      +|||+|.||.|.||.-.+++-..   ...|...|++|+|-|++ -+-.|+.++.||+|+|.+.+.. ...   ......+
T Consensus        72 iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waphe-ygl~LacasSDG~vsvl~~~~~g~w~---t~ki~~a  147 (299)
T KOG1332|consen   72 ILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHE-YGLLLACASSDGKVSVLTYDSSGGWT---TSKIVFA  147 (299)
T ss_pred             EeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccc-cceEEEEeeCCCcEEEEEEcCCCCcc---chhhhhc
Confidence            58999999999999988774322   23467889999999975 3456889999999999999875 111   1122358


Q ss_pred             cCcCcEEEEEEcCCC--C-----------CEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcc
Q psy6415          77 HKATTVWAAKHLPQN--R-----------DLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPM  143 (174)
Q Consensus        77 h~~~~i~~v~fsP~~--~-----------~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~  143 (174)
                      |.- .|++|+|.|-.  +           ..|||||.|..|+||+.+                            +|   
T Consensus       148 H~~-GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~----------------------------~~---  195 (299)
T KOG1332|consen  148 HEI-GVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFD----------------------------SD---  195 (299)
T ss_pred             ccc-ccceeeecCcCCCccccccCcccccceeeccCCccceeeeecC----------------------------Cc---
Confidence            988 99999999841  1           359999999999999991                            11   


Q ss_pred             ccccccceeeeeeccccceeeeeeCCC
Q psy6415         144 GVPGSLTLLQEATLSSQPINSLDWSAD  170 (174)
Q Consensus       144 ~~~~~~~ll~~~~~h~~~V~~l~~spd  170 (174)
                          +-++-.+|++|+..||+++|.|.
T Consensus       196 ----~w~~e~~l~~H~dwVRDVAwaP~  218 (299)
T KOG1332|consen  196 ----SWKLERTLEGHKDWVRDVAWAPS  218 (299)
T ss_pred             ----chhhhhhhhhcchhhhhhhhccc
Confidence                12355668999999999999995

>KOG1188|consensus

Probab=99.59  E-value=1.1e-14  Score=117.36  Aligned_cols=100  Identities=15%  Similarity=0.337  Sum_probs=78.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe---ecC-CCEEEEEecCCCCCCCEEEEEe----CCCcEEEEECCCccc-ccceeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET---NLK-NGVCGVDFDRRDIPMNKLVATT----LEAKLFVFDLKTLHR-EKGFAYL   72 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~---~~~-~~V~sv~f~~~~~~~~~l~s~s----~Dg~I~iWD~~~~~~-~~~~~~~   72 (174)
                      |.+|+.||+||+||+|+.......   +++ ....+++.+-.   .+++++|+    .|..|.+||+|..+. +..    
T Consensus        87 v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck---~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~----  159 (376)
T KOG1188|consen   87 VISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCK---KNIIACGTELTRSDASVVLWDVRSEQQLLRQ----  159 (376)
T ss_pred             eEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCc---CCeEEeccccccCceEEEEEEeccccchhhh----
Confidence            679999999999999987643221   222 45677777654   37788874    678899999998653 221    


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -...|.+ .|.+|+|||.++++|+|||.||-|.|+|+
T Consensus       160 ~~eSH~D-DVT~lrFHP~~pnlLlSGSvDGLvnlfD~  195 (376)
T KOG1188|consen  160 LNESHND-DVTQLRFHPSDPNLLLSGSVDGLVNLFDT  195 (376)
T ss_pred             hhhhccC-cceeEEecCCCCCeEEeecccceEEeeec
Confidence            2358999 99999999999999999999999999999

>KOG0305|consensus

Probab=99.58  E-value=1e-14  Score=124.24  Aligned_cols=126  Identities=15%  Similarity=0.280  Sum_probs=105.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      .||.|..+|.|.|||..+.+.+....  |...|.+++|+.     ..+.+|+.|+.|..+|+|..+..-.    ++.+|.
T Consensus       231 ~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~-----~~lssGsr~~~I~~~dvR~~~~~~~----~~~~H~  301 (484)
T KOG0305|consen  231 HLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNS-----SVLSSGSRDGKILNHDVRISQHVVS----TLQGHR  301 (484)
T ss_pred             EEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccC-----ceEEEecCCCcEEEEEEecchhhhh----hhhccc
Confidence            48999999999999998776655433  567899999995     7899999999999999998764321    356899


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      . +|-.++|+| ++..||+|+.|+.|.|||.                             ..        .+.++++..|
T Consensus       302 q-eVCgLkws~-d~~~lASGgnDN~~~Iwd~-----------------------------~~--------~~p~~~~~~H  342 (484)
T KOG0305|consen  302 Q-EVCGLKWSP-DGNQLASGGNDNVVFIWDG-----------------------------LS--------PEPKFTFTEH  342 (484)
T ss_pred             c-eeeeeEECC-CCCeeccCCCccceEeccC-----------------------------CC--------ccccEEEecc
Confidence            9 999999999 5679999999999999999                             11        1357899999


Q ss_pred             ccceeeeeeCCCCCCC
Q psy6415         159 SQPINSLDWSADKLGL  174 (174)
Q Consensus       159 ~~~V~~l~~spd~~~~  174 (174)
                      ...|..|+|+|--+||
T Consensus       343 ~aAVKA~awcP~q~~l  358 (484)
T KOG0305|consen  343 TAAVKALAWCPWQSGL  358 (484)
T ss_pred             ceeeeEeeeCCCccCc
Confidence            9999999999987775

>KOG4283|consensus

Probab=99.58  E-value=3.3e-14  Score=113.21  Aligned_cols=168  Identities=14%  Similarity=0.207  Sum_probs=113.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-ccccee--------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REKGFA--------   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~~~--------   70 (174)
                      +||+|..|-.|+|.|+.+|.+...+ .|.++|.+|.|+|..  .-.|+|||.||.||+||+|... |...+.        
T Consensus       160 LiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~--e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p  237 (397)
T KOG4283|consen  160 LIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSS--EWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPP  237 (397)
T ss_pred             EEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCc--eeEEEecCCCceEEEEEeecccceeEEeecccCccCc
Confidence            4899999999999999999988765 478999999999964  3568899999999999999762 111100        


Q ss_pred             -eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc---ccccccc----ccceeeeecCCCCCCc--ccCCCC
Q psy6415          71 -YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS---ALRADTN----LCSIFRYSSNYPTQRT--KPDIDD  140 (174)
Q Consensus        71 -~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~---~~~~~~~----~~~~~~~~~~~~~~~~--~~~~dg  140 (174)
                       +.+-.+|.+ .|+.++|+. ++..+++++.|..+++|+.++   +++.-.+    ....|.+.........  ....+|
T Consensus       238 ~~~~n~ah~g-kvngla~tS-d~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~  315 (397)
T KOG4283|consen  238 ILKTNTAHYG-KVNGLAWTS-DARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDG  315 (397)
T ss_pred             cccccccccc-eeeeeeecc-cchhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCC
Confidence             112347888 999999999 566889999999999999966   2221111    1111222211100000  000121


Q ss_pred             -CccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         141 -IPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       141 -~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                       ..+..+..++.+..+.+|-..|++-.|-||-+
T Consensus       316 ~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq  348 (397)
T KOG4283|consen  316 SLALLNLLEGSFVRRLSTHLKRINCAAYRPDFE  348 (397)
T ss_pred             eEEEEEccCceEEEeeecccceeeEEeecCchh
Confidence             11122456678889999989999999988743

>KOG0318|consensus

Probab=99.57  E-value=5.6e-14  Score=118.57  Aligned_cols=162  Identities=14%  Similarity=0.177  Sum_probs=117.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE--e-ecCCCEEEEEecCCCCCCCEEEEEe--CC--CcEEEEECCCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE--T-NLKNGVCGVDFDRRDIPMNKLVATT--LE--AKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~--~-~~~~~V~sv~f~~~~~~~~~l~s~s--~D--g~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +||||...|+|||||......+..  + ...+.|..|+|++++   .+|++.+  .+  |.+-+||--+  .     ...
T Consensus        73 yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds---~RI~avGEGrerfg~~F~~DSG~--S-----vGe  142 (603)
T KOG0318|consen   73 YIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDS---KRIAAVGEGRERFGHVFLWDSGN--S-----VGE  142 (603)
T ss_pred             EEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCC---cEEEEEecCccceeEEEEecCCC--c-----cce
Confidence            489999999999999865443322  2 245789999999974   6666554  33  3466777544  2     234


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc-cccccccccceeeeecCC-CCCCcccC--CCCCcc-ccccc
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS-ALRADTNLCSIFRYSSNY-PTQRTKPD--IDDIPM-GVPGS  148 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~--~dg~~~-~~~~~  148 (174)
                      +.+|+. .|+++.|-|.-+..+||||.|++|.+|.=-- ++......+++|+....| |++...+.  .||+.. +.-.+
T Consensus       143 i~GhSr-~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGkt  221 (603)
T KOG0318|consen  143 ITGHSR-RINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKT  221 (603)
T ss_pred             eeccce-eEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCC
Confidence            569999 9999999998788999999999999987400 111122256789999999 98876544  555432 22367


Q ss_pred             cceeeeee---ccccceeeeeeCCCCCC
Q psy6415         149 LTLLQEAT---LSSQPINSLDWSADKLG  173 (174)
Q Consensus       149 ~~ll~~~~---~h~~~V~~l~~spd~~~  173 (174)
                      ++.+-.++   +|...|..|+||||++-
T Consensus       222 ge~vg~l~~~~aHkGsIfalsWsPDs~~  249 (603)
T KOG0318|consen  222 GEKVGELEDSDAHKGSIFALSWSPDSTQ  249 (603)
T ss_pred             ccEEEEecCCCCccccEEEEEECCCCce
Confidence            78888888   99999999999999863

>KOG0316|consensus

Probab=99.57  E-value=2.8e-14  Score=110.61  Aligned_cols=122  Identities=21%  Similarity=0.371  Sum_probs=95.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |++||.||+++.||+|.|++.. -....+|+++.|++++   +..++++.|++|++-|-.+++.++.|     ++|.+ .
T Consensus       158 IvaGS~DGtvRtydiR~G~l~s-Dy~g~pit~vs~s~d~---nc~La~~l~stlrLlDk~tGklL~sY-----kGhkn-~  227 (307)
T KOG0316|consen  158 IVAGSVDGTVRTYDIRKGTLSS-DYFGHPITSVSFSKDG---NCSLASSLDSTLRLLDKETGKLLKSY-----KGHKN-M  227 (307)
T ss_pred             EEeeccCCcEEEEEeecceeeh-hhcCCcceeEEecCCC---CEEEEeeccceeeecccchhHHHHHh-----ccccc-c
Confidence            7899999999999999987642 2346789999999974   89999999999999999998765544     58877 4


Q ss_pred             EEE--EEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          82 VWA--AKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        82 i~~--v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                      -+.  ..++. ....+++||+||.|.+||++                            |+         .++-.+..|+
T Consensus       228 eykldc~l~q-sdthV~sgSEDG~Vy~wdLv----------------------------d~---------~~~sk~~~~~  269 (307)
T KOG0316|consen  228 EYKLDCCLNQ-SDTHVFSGSEDGKVYFWDLV----------------------------DE---------TQISKLSVVS  269 (307)
T ss_pred             eeeeeeeecc-cceeEEeccCCceEEEEEec----------------------------cc---------eeeeeeccCC
Confidence            443  45665 34688999999999999991                            21         3566667777


Q ss_pred             cc-eeeeeeCCCC
Q psy6415         160 QP-INSLDWSADK  171 (174)
Q Consensus       160 ~~-V~~l~~spd~  171 (174)
                      .+ |.+|+++|-.
T Consensus       270 ~v~v~dl~~hp~~  282 (307)
T KOG0316|consen  270 TVIVTDLSCHPTM  282 (307)
T ss_pred             ceeEEeeecccCc
Confidence            77 7888888743

>KOG0301|consensus

Probab=99.56  E-value=1.6e-14  Score=124.86  Aligned_cols=92  Identities=20%  Similarity=0.326  Sum_probs=77.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |+|||.|.++|+|-+.  ++.. ...|...|.+|++-|.    +.++|||.|.+||+|.-.+       .+.++.+|++ 
T Consensus       115 ~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e----~~~vTgsaDKtIklWk~~~-------~l~tf~gHtD-  180 (745)
T KOG0301|consen  115 LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPE----NTYVTGSADKTIKLWKGGT-------LLKTFSGHTD-  180 (745)
T ss_pred             eEecccccceEEecch--hhhcccCCcchheeeeeecCC----CcEEeccCcceeeeccCCc-------hhhhhccchh-
Confidence            6899999999999663  3333 3467889999998885    6899999999999998643       2456679999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|+.+++.|+  ..|+||+.||.|++|++
T Consensus       181 ~VRgL~vl~~--~~flScsNDg~Ir~w~~  207 (745)
T KOG0301|consen  181 CVRGLAVLDD--SHFLSCSNDGSIRLWDL  207 (745)
T ss_pred             heeeeEEecC--CCeEeecCCceEEEEec
Confidence            9999999984  35899999999999999

>KOG0293|consensus

Probab=99.56  E-value=2.3e-14  Score=118.15  Aligned_cols=100  Identities=15%  Similarity=0.170  Sum_probs=83.5

Q ss_pred             CEEEEecCCcEEEEECCCCCe---EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL---KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~---~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +||||+.|.+..||++-....   ..+ ..|..+|..|.|+|++   ++|++|+.|..+++||+.++.+.+.|.    .+
T Consensus       238 yLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDd---ryLlaCg~~e~~~lwDv~tgd~~~~y~----~~  310 (519)
T KOG0293|consen  238 YLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDD---RYLLACGFDEVLSLWDVDTGDLRHLYP----SG  310 (519)
T ss_pred             eEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCC---CeEEecCchHheeeccCCcchhhhhcc----cC
Confidence            589999999999999743322   222 4578999999999987   899999999999999999998776553    24


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.. .+.+++|.| |+..|++|+.|++|..||+
T Consensus       311 ~~~-S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdl  341 (519)
T KOG0293|consen  311 LGF-SVSSCAWCP-DGFRFVTGSPDRTIIMWDL  341 (519)
T ss_pred             cCC-CcceeEEcc-CCceeEecCCCCcEEEecC
Confidence            556 889999999 5678999999999999999

>KOG0296|consensus

Probab=99.56  E-value=8.5e-14  Score=113.06  Aligned_cols=126  Identities=18%  Similarity=0.259  Sum_probs=101.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      ++|||+.|..-.||++.++...... .|+..|.++.|+-+   +.+||||..+|.|+||+..++...     ..+...-.
T Consensus        78 l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fshd---gtlLATGdmsG~v~v~~~stg~~~-----~~~~~e~~  149 (399)
T KOG0296|consen   78 LVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHD---GTLLATGDMSGKVLVFKVSTGGEQ-----WKLDQEVE  149 (399)
T ss_pred             eEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccC---ceEEEecCCCccEEEEEcccCceE-----EEeecccC
Confidence            4799999999999999999876654 58899999999986   489999999999999999986532     22222223


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|--+.||| -..+|++|+.||.|-+|.+                    |        .         ..+.+.+.||+
T Consensus       150 -dieWl~WHp-~a~illAG~~DGsvWmw~i--------------------p--------~---------~~~~kv~~Gh~  190 (399)
T KOG0296|consen  150 -DIEWLKWHP-RAHILLAGSTDGSVWMWQI--------------------P--------S---------QALCKVMSGHN  190 (399)
T ss_pred             -ceEEEEecc-cccEEEeecCCCcEEEEEC--------------------C--------C---------cceeeEecCCC
Confidence             677899999 5678999999999999999                    1        1         02567778888


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .++++=.|.|||+-
T Consensus       191 ~~ct~G~f~pdGKr  204 (399)
T KOG0296|consen  191 SPCTCGEFIPDGKR  204 (399)
T ss_pred             CCcccccccCCCce
Confidence            88888888888764

>KOG1407|consensus

Probab=99.56  E-value=6.5e-14  Score=109.76  Aligned_cols=162  Identities=9%  Similarity=0.066  Sum_probs=107.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ||+|+.|+++++|++........   ..|...|--+.|+|..  .+.+++++.|.+|++||+|..++....     .. +
T Consensus        35 lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~--~d~~atas~dk~ir~wd~r~~k~~~~i-----~~-~  106 (313)
T KOG1407|consen   35 LASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKH--PDLFATASGDKTIRIWDIRSGKCTARI-----ET-K  106 (313)
T ss_pred             eeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCC--CcceEEecCCceEEEEEeccCcEEEEe-----ec-c
Confidence            79999999999999987755433   2356778889999864  588999999999999999998765321     11 2


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceee--eecCCCCCCcccCCC--CCcccc-ccccceee
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFR--YSSNYPTQRTKPDID--DIPMGV-PGSLTLLQ  153 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d--g~~~~~-~~~~~ll~  153 (174)
                      . +=.-+.|+|+ +..+|.++.|..|.+.|.....+..+..-..|+  +....+.. ..+-..  |.+.-. -...|.++
T Consensus       107 ~-eni~i~wsp~-g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd-~Fflt~GlG~v~ILsypsLkpv~  183 (313)
T KOG1407|consen  107 G-ENINITWSPD-GEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSND-LFFLTNGLGCVEILSYPSLKPVQ  183 (313)
T ss_pred             C-cceEEEEcCC-CCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCC-EEEEecCCceEEEEecccccccc
Confidence            2 3346789995 567899999999999999542222221111111  11110000 000011  221111 13457899


Q ss_pred             eeeccccceeeeeeCCCCCCC
Q psy6415         154 EATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       154 ~~~~h~~~V~~l~~spd~~~~  174 (174)
                      +++.|.....+|.|+|+|+.+
T Consensus       184 si~AH~snCicI~f~p~Gryf  204 (313)
T KOG1407|consen  184 SIKAHPSNCICIEFDPDGRYF  204 (313)
T ss_pred             ccccCCcceEEEEECCCCceE
Confidence            999999999999999999854

>KOG0306|consensus

Probab=99.56  E-value=3.3e-14  Score=123.97  Aligned_cols=125  Identities=20%  Similarity=0.317  Sum_probs=108.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||.+--|.+||+|=+.+-+.-.. ..|+-+|.+++.+|+.   ..++|||.|.+||||-+.=+.|.+.+     -+|.+
T Consensus       522 ~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DS---klivTgSADKnVKiWGLdFGDCHKS~-----fAHdD  593 (888)
T KOG0306|consen  522 LLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDS---KLIVTGSADKNVKIWGLDFGDCHKSF-----FAHDD  593 (888)
T ss_pred             EEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCc---CeEEeccCCCceEEeccccchhhhhh-----hcccC
Confidence            478888999999999998876544 5688999999999974   89999999999999999887776543     49999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.+|.|-|+ ...|.|||.||.||-||-+                                     ..+.++++.+|.
T Consensus       594 -Svm~V~F~P~-~~~FFt~gKD~kvKqWDg~-------------------------------------kFe~iq~L~~H~  634 (888)
T KOG0306|consen  594 -SVMSVQFLPK-THLFFTCGKDGKVKQWDGE-------------------------------------KFEEIQKLDGHH  634 (888)
T ss_pred             -ceeEEEEccc-ceeEEEecCcceEEeechh-------------------------------------hhhhheeeccch
Confidence             9999999994 5688999999999999981                                     135699999999


Q ss_pred             cceeeeeeCCCCC
Q psy6415         160 QPINSLDWSADKL  172 (174)
Q Consensus       160 ~~V~~l~~spd~~  172 (174)
                      ..|++++.+|+|.
T Consensus       635 ~ev~cLav~~~G~  647 (888)
T KOG0306|consen  635 SEVWCLAVSPNGS  647 (888)
T ss_pred             heeeeeEEcCCCC
Confidence            9999999999984

>KOG0289|consensus

Probab=99.55  E-value=7.8e-14  Score=115.49  Aligned_cols=126  Identities=13%  Similarity=0.225  Sum_probs=100.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++++.|-.|++|......... ...|...|+.+..+|.+   .+|+++|+|++.-+.|+++..+..   ...-+.-.- 
T Consensus       276 v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tg---eYllsAs~d~~w~Fsd~~~g~~lt---~vs~~~s~v-  348 (506)
T KOG0289|consen  276 VITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTG---EYLLSASNDGTWAFSDISSGSQLT---VVSDETSDV-  348 (506)
T ss_pred             eeecCCcceEEeeccccccCccccccccccceeeeeccCC---cEEEEecCCceEEEEEccCCcEEE---EEeeccccc-
Confidence            6789999999999987665443 34577889999999974   999999999999999999976431   111111123 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .+.+.+||| |+.+|++|..||.|+|||+.                            .         ...+..|.||+.
T Consensus       349 ~~ts~~fHp-DgLifgtgt~d~~vkiwdlk----------------------------s---------~~~~a~Fpght~  390 (506)
T KOG0289|consen  349 EYTSAAFHP-DGLIFGTGTPDGVVKIWDLK----------------------------S---------QTNVAKFPGHTG  390 (506)
T ss_pred             eeEEeeEcC-CceEEeccCCCceEEEEEcC----------------------------C---------ccccccCCCCCC
Confidence            589999999 67899999999999999991                            1         124678899999


Q ss_pred             ceeeeeeCCCCC
Q psy6415         161 PINSLDWSADKL  172 (174)
Q Consensus       161 ~V~~l~~spd~~  172 (174)
                      ||.+|+||-+|=
T Consensus       391 ~vk~i~FsENGY  402 (506)
T KOG0289|consen  391 PVKAISFSENGY  402 (506)
T ss_pred             ceeEEEeccCce
Confidence            999999998874

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.55  E-value=1.7e-13  Score=108.64  Aligned_cols=99  Identities=12%  Similarity=0.144  Sum_probs=76.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +++|++.|+.|++||+.++++.........+.+++|+|++   ..+ ++++.|+.|++||+++.+...     .+..+. 
T Consensus         3 ~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg---~~l~~~~~~~~~v~~~d~~~~~~~~-----~~~~~~-   73 (300)
T TIGR03866         3 AYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDG---KLLYVCASDSDTIQVIDLATGEVIG-----TLPSGP-   73 (300)
T ss_pred             EEEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCC---CEEEEEECCCCeEEEEECCCCcEEE-----eccCCC-
Confidence            4789999999999999999887766655667889999974   555 677889999999998865322     222333 


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .+..++|+|++..++++++.|++|++||+
T Consensus        74 -~~~~~~~~~~g~~l~~~~~~~~~l~~~d~  102 (300)
T TIGR03866        74 -DPELFALHPNGKILYIANEDDNLVTVIDI  102 (300)
T ss_pred             -CccEEEECCCCCEEEEEcCCCCeEEEEEC
Confidence             35678999976656677778999999999

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0290|consensus

Probab=99.54  E-value=1.4e-13  Score=109.45  Aligned_cols=106  Identities=15%  Similarity=0.235  Sum_probs=86.7

Q ss_pred             CEEEEecCCcEEEEECCCCCe----EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc-----------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL----KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR-----------   65 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~----~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~-----------   65 (174)
                      +|.+.|-|-|..|||+.++..    .+...|...|+.|+|...+  .+.+|+.+.||.||+||+|..+-           
T Consensus       165 ~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s--~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~  242 (364)
T KOG0290|consen  165 LIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGS--RDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPS  242 (364)
T ss_pred             eeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCc--cceEEEecCCCcEEEEEecccccceEEecCCCCC
Confidence            477899999999999998732    2346788999999999853  47899999999999999997530           


Q ss_pred             --------------------------------ccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          66 --------------------------------EKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        66 --------------------------------~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                                                      .....+..+++|++ .|+.++|.|.....++|||.|..+-|||+
T Consensus       243 ~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a-~VNgIaWaPhS~~hictaGDD~qaliWDl  317 (364)
T KOG0290|consen  243 TPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQA-SVNGIAWAPHSSSHICTAGDDCQALIWDL  317 (364)
T ss_pred             CcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcc-cccceEecCCCCceeeecCCcceEEEEec
Confidence                                            00011224568999 99999999999999999999999999999

>KOG0772|consensus

Probab=99.54  E-value=5.8e-14  Score=118.37  Aligned_cols=105  Identities=9%  Similarity=0.158  Sum_probs=76.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE-------------EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW-------------ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-   66 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~-------------~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-   66 (174)
                      +|+..+.....||+|....+...             +..|...+++..|+|..  .+.++|+|+||++||||+.+.... 
T Consensus       228 ~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~--k~~FlT~s~DgtlRiWdv~~~k~q~  305 (641)
T KOG0772|consen  228 QILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN--KEEFLTCSYDGTLRIWDVNNTKSQL  305 (641)
T ss_pred             eEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCc--ccceEEecCCCcEEEEecCCchhhe
Confidence            35566667899999987654322             22455679999999985  477999999999999999875421 


Q ss_pred             cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          67 KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        67 ~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+......+-.- ++.+++|+| ++.+||+|+.||+|.+|+.
T Consensus       306 qVik~k~~~g~Rv-~~tsC~~nr-dg~~iAagc~DGSIQ~W~~  346 (641)
T KOG0772|consen  306 QVIKTKPAGGKRV-PVTSCAWNR-DGKLIAAGCLDGSIQIWDK  346 (641)
T ss_pred             eEEeeccCCCccc-CceeeecCC-CcchhhhcccCCceeeeec
Confidence            2121111112233 788999999 5668999999999999998

>KOG0303|consensus

Probab=99.54  E-value=4.5e-14  Score=115.81  Aligned_cols=99  Identities=11%  Similarity=0.165  Sum_probs=83.5

Q ss_pred             CEEEEecCCcEEEEECCCCCe--------EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL--------KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~--------~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      .|||||+|-+|+||++..+.+        .....|...|.-|+|+|..  .|.|+|++.|++|.|||+.+++.     +.
T Consensus        96 vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA--~NVLlsag~Dn~v~iWnv~tgea-----li  168 (472)
T KOG0303|consen   96 VIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTA--PNVLLSAGSDNTVSIWNVGTGEA-----LI  168 (472)
T ss_pred             eeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccc--hhhHhhccCCceEEEEeccCCce-----ee
Confidence            489999999999999865432        1224577889999999975  58899999999999999999763     33


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++. |.+ -|+++.|+- ++.+|+|++.|+.|++||-
T Consensus       169 ~l~-hpd-~i~S~sfn~-dGs~l~TtckDKkvRv~dp  202 (472)
T KOG0303|consen  169 TLD-HPD-MVYSMSFNR-DGSLLCTTCKDKKVRVIDP  202 (472)
T ss_pred             ecC-CCC-eEEEEEecc-CCceeeeecccceeEEEcC
Confidence            444 999 999999999 6779999999999999999

>KOG1445|consensus

Probab=99.54  E-value=1.4e-14  Score=124.71  Aligned_cols=127  Identities=16%  Similarity=0.215  Sum_probs=97.9

Q ss_pred             cCCcEEEEECCC-CCeE----EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc--cceeeeeecccCc
Q psy6415           7 DNGDLKMFDLKT-MSLK----WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE--KGFAYLSEKAHKA   79 (174)
Q Consensus         7 ~Dg~iklWDl~~-~~~~----~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~--~~~~~~~~~~h~~   79 (174)
                      .-|.|.|++++. |++.    ..+.....|+.+.|+|.+  .+.||.+++||.|+||.+..+...  ....-..+.+|..
T Consensus       601 ~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD--~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~e  678 (1012)
T KOG1445|consen  601 SGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFD--DERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGE  678 (1012)
T ss_pred             CCceEEEEEcCCCCCCCcccccccccCceeeecccCCCC--hHHeeecccCceEEEEEeccCCCCcccCCcceeeecccc
Confidence            358999999975 3321    112234569999999986  578999999999999999764211  1111234568888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++|||--.++||+++.|-+|+|||+.                                     .+++--.|.||+
T Consensus       679 -KI~slRfHPLAadvLa~asyd~Ti~lWDl~-------------------------------------~~~~~~~l~gHt  720 (1012)
T KOG1445|consen  679 -KITSLRFHPLAADVLAVASYDSTIELWDLA-------------------------------------NAKLYSRLVGHT  720 (1012)
T ss_pred             -eEEEEEecchhhhHhhhhhccceeeeeehh-------------------------------------hhhhhheeccCc
Confidence             999999999988999999999999999991                                     124556778999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      ..|.+|+|||||+-
T Consensus       721 dqIf~~AWSpdGr~  734 (1012)
T KOG1445|consen  721 DQIFGIAWSPDGRR  734 (1012)
T ss_pred             CceeEEEECCCCcc
Confidence            99999999999974

>KOG1446|consensus

Probab=99.54  E-value=2.3e-13  Score=108.59  Aligned_cols=99  Identities=18%  Similarity=0.284  Sum_probs=82.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeC--CCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTL--EAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~--Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|+++++|-+++|||..+++...... .+.+|..+.|....   +.++.+|.  |.+||.-++.+++.++.     +.+|
T Consensus        28 ~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~---~~~i~sStk~d~tIryLsl~dNkylRY-----F~GH   99 (311)
T KOG1446|consen   28 LLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHS---NTVIHSSTKEDDTIRYLSLHDNKYLRY-----FPGH   99 (311)
T ss_pred             EEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCC---ceEEEccCCCCCceEEEEeecCceEEE-----cCCC
Confidence            36788999999999999998877665 45788888887543   66666665  99999999999876544     4699


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .. .|++++.+|- +..|.|+|.|++|+|||+
T Consensus       100 ~~-~V~sL~~sP~-~d~FlS~S~D~tvrLWDl  129 (311)
T KOG1446|consen  100 KK-RVNSLSVSPK-DDTFLSSSLDKTVRLWDL  129 (311)
T ss_pred             Cc-eEEEEEecCC-CCeEEecccCCeEEeeEe
Confidence            99 9999999995 479999999999999999

>KOG1332|consensus

Probab=99.53  E-value=1.9e-14  Score=111.91  Aligned_cols=107  Identities=17%  Similarity=0.372  Sum_probs=86.4

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE-cCCCCCEEEEEcCCCcEE
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH-LPQNRDLFVTCGGSGSLN  105 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f-sP~~~~~las~s~Dg~V~  105 (174)
                      |.+.|..+..+-.   +.+|||+|.|++|||+.+++...  ..++.++.+|++ +||.|+| ||.-+.+||||+.||.|-
T Consensus        10 H~D~IHda~lDyy---gkrlATcsSD~tVkIf~v~~n~~--s~ll~~L~Gh~G-PVwqv~wahPk~G~iLAScsYDgkVI   83 (299)
T KOG1332|consen   10 HEDMIHDAQLDYY---GKRLATCSSDGTVKIFEVRNNGQ--SKLLAELTGHSG-PVWKVAWAHPKFGTILASCSYDGKVI   83 (299)
T ss_pred             hhhhhhHhhhhhh---cceeeeecCCccEEEEEEcCCCC--ceeeeEecCCCC-CeeEEeecccccCcEeeEeecCceEE
Confidence            4555666555543   48899999999999999998643  245678899999 9999999 687788999999999999


Q ss_pred             EEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         106 LWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       106 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      ||.-+                            .|       +-+-+..+..|+..|++++|-|.+-||
T Consensus        84 iWke~----------------------------~g-------~w~k~~e~~~h~~SVNsV~wapheygl  117 (299)
T KOG1332|consen   84 IWKEE----------------------------NG-------RWTKAYEHAAHSASVNSVAWAPHEYGL  117 (299)
T ss_pred             EEecC----------------------------CC-------chhhhhhhhhhcccceeecccccccce
Confidence            99981                            11       233578889999999999999998775

>KOG0973|consensus

Probab=99.53  E-value=7e-14  Score=125.43  Aligned_cols=99  Identities=16%  Similarity=0.294  Sum_probs=83.7

Q ss_pred             CEEEEecCCcEEEEECCC----------CC--------eEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC
Q psy6415           1 MVVAGYDNGDLKMFDLKT----------MS--------LKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK   61 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~----------~~--------~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~   61 (174)
                      +||+|++|+.|.||....          |.        +.. ...|...|..|.|+|++   .+||++|.|++|-|||.+
T Consensus        83 ~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~---~~lvS~s~DnsViiwn~~  159 (942)
T KOG0973|consen   83 YLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDD---SLLVSVSLDNSVIIWNAK  159 (942)
T ss_pred             eEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCc---cEEEEecccceEEEEccc
Confidence            589999999999999872          10        111 23577889999999975   899999999999999999


Q ss_pred             CcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          62 TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        62 ~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+.     +..+++|+. .|-.|.|-| -+.+|||-+.|++|++|+.
T Consensus       160 tF~~-----~~vl~~H~s-~VKGvs~DP-~Gky~ASqsdDrtikvwrt  200 (942)
T KOG0973|consen  160 TFEL-----LKVLRGHQS-LVKGVSWDP-IGKYFASQSDDRTLKVWRT  200 (942)
T ss_pred             ccee-----eeeeecccc-cccceEECC-ccCeeeeecCCceEEEEEc
Confidence            9753     446679999 999999999 5679999999999999997

>KOG1446|consensus

Probab=99.53  E-value=6.3e-13  Score=106.16  Aligned_cols=151  Identities=15%  Similarity=0.140  Sum_probs=107.0

Q ss_pred             CCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      |.+||.-++.+.+.+.. ..|...|++|+.+|-+   +.++++|.|++||+||+|..+|.. ++    ..  . .-..+|
T Consensus        79 d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~---d~FlS~S~D~tvrLWDlR~~~cqg-~l----~~--~-~~pi~A  147 (311)
T KOG1446|consen   79 DDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKD---DTFLSSSLDKTVRLWDLRVKKCQG-LL----NL--S-GRPIAA  147 (311)
T ss_pred             CCceEEEEeecCceEEEcCCCCceEEEEEecCCC---CeEEecccCCeEEeeEecCCCCce-EE----ec--C-CCccee
Confidence            88999999999987765 4688999999999964   899999999999999999766542 21    11  1 223578


Q ss_pred             EcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCC-cccCCCCCcccc-----------ccccceee
Q psy6415          87 HLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQR-TKPDIDDIPMGV-----------PGSLTLLQ  153 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~dg~~~~~-----------~~~~~ll~  153 (174)
                      |.| .+-+||++.....|+|||+.+   -++.+.+.|.+..+- ++.. ..+..||+-+-+           +..+.++.
T Consensus       148 fDp-~GLifA~~~~~~~IkLyD~Rs---~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~  223 (311)
T KOG1446|consen  148 FDP-EGLIFALANGSELIKLYDLRS---FDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKS  223 (311)
T ss_pred             ECC-CCcEEEEecCCCeEEEEEecc---cCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEee
Confidence            999 567999998888999999922   334455666665211 1111 113355543311           24557888


Q ss_pred             eeeccccce---eeeeeCCCCCC
Q psy6415         154 EATLSSQPI---NSLDWSADKLG  173 (174)
Q Consensus       154 ~~~~h~~~V---~~l~~spd~~~  173 (174)
                      +++++...=   .+..|+||++-
T Consensus       224 tfs~~~~~~~~~~~a~ftPds~F  246 (311)
T KOG1446|consen  224 TFSGYPNAGNLPLSATFTPDSKF  246 (311)
T ss_pred             eEeeccCCCCcceeEEECCCCcE
Confidence            998888664   58899999863

>KOG0294|consensus

Probab=99.52  E-value=1.4e-13  Score=110.21  Aligned_cols=101  Identities=18%  Similarity=0.313  Sum_probs=84.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      ++|||+.|-+|+|||+++...... ..|.+.|+++.|.+.- ..+.|++|++||.|.+||...-+     .+.++++|..
T Consensus        55 ~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~-S~shLlS~sdDG~i~iw~~~~W~-----~~~slK~H~~  128 (362)
T KOG0294|consen   55 YVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPL-SKSHLLSGSDDGHIIIWRVGSWE-----LLKSLKAHKG  128 (362)
T ss_pred             eEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCc-chhheeeecCCCcEEEEEcCCeE-----Eeeeeccccc
Confidence            489999999999999987765443 4567889999999853 23379999999999999998754     3456789999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .|+.++.|| .+.+-.|-+.|+.+++||+
T Consensus       129 -~Vt~lsiHP-S~KLALsVg~D~~lr~WNL  156 (362)
T KOG0294|consen  129 -QVTDLSIHP-SGKLALSVGGDQVLRTWNL  156 (362)
T ss_pred             -ccceeEecC-CCceEEEEcCCceeeeehh
Confidence             899999999 4567788899999999999

>KOG0640|consensus

Probab=99.52  E-value=3.9e-14  Score=113.49  Aligned_cols=102  Identities=20%  Similarity=0.321  Sum_probs=82.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE---EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW---ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~---~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      .|+||+.|++||++|...-....   .+.....|.+|+|+|.   |..|+.|.+-.+++|||+++.+|-.  ....-.+|
T Consensus       186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPs---GefllvgTdHp~~rlYdv~T~Qcfv--sanPd~qh  260 (430)
T KOG0640|consen  186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPS---GEFLLVGTDHPTLRLYDVNTYQCFV--SANPDDQH  260 (430)
T ss_pred             eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCC---CceEEEecCCCceeEEeccceeEee--ecCccccc
Confidence            48999999999999986433221   1234577999999996   4899999999999999999976521  11233578


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++ .|.+|.+|+ .+.+.+|||.||.|||||-
T Consensus       261 t~-ai~~V~Ys~-t~~lYvTaSkDG~IklwDG  290 (430)
T KOG0640|consen  261 TG-AITQVRYSS-TGSLYVTASKDGAIKLWDG  290 (430)
T ss_pred             cc-ceeEEEecC-CccEEEEeccCCcEEeecc
Confidence            88 999999999 5779999999999999997

>KOG0301|consensus

Probab=99.52  E-value=3.5e-14  Score=122.82  Aligned_cols=150  Identities=19%  Similarity=0.267  Sum_probs=109.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |++|+.|++|.+|.+.+...... ..|+..||+++...+    ..++|||.|.++|+|-+...       ...+.+|+. 
T Consensus        74 l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~----~~~iSgSWD~TakvW~~~~l-------~~~l~gH~a-  141 (745)
T KOG0301|consen   74 LVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGED----GTLISGSWDSTAKVWRIGEL-------VYSLQGHTA-  141 (745)
T ss_pred             eEeecccceEEEEecCCCCchhhhhccccceeeeecCCc----CceEecccccceEEecchhh-------hcccCCcch-
Confidence            78899999999999988877655 468899999997654    34999999999999976542       234679999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcc--------cCCCCCcccccccccee
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTK--------PDIDDIPMGVPGSLTLL  152 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~dg~~~~~~~~~~ll  152 (174)
                      .||+|++-|.+  .++|||.|.+||||.-.+.++       .|.++..+.-+...        ...||...-..-.++.|
T Consensus       142 sVWAv~~l~e~--~~vTgsaDKtIklWk~~~~l~-------tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~ge~l  212 (745)
T KOG0301|consen  142 SVWAVASLPEN--TYVTGSADKTIKLWKGGTLLK-------TFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLDGEVL  212 (745)
T ss_pred             heeeeeecCCC--cEEeccCcceeeeccCCchhh-------hhccchhheeeeEEecCCCeEeecCCceEEEEeccCcee
Confidence            99999999954  789999999999999844332       12222222111111        11355322223467899


Q ss_pred             eeeeccccceeeeeeCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~  172 (174)
                      .++.||+.-|++++..++++
T Consensus       213 ~~~~ghtn~vYsis~~~~~~  232 (745)
T KOG0301|consen  213 LEMHGHTNFVYSISMALSDG  232 (745)
T ss_pred             eeeeccceEEEEEEecCCCC
Confidence            99999999999999877654

>KOG0307|consensus

Probab=99.52  E-value=2.4e-14  Score=129.00  Aligned_cols=161  Identities=16%  Similarity=0.248  Sum_probs=109.6

Q ss_pred             CEEEEecCCcEEEEECCC---CCe----EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKT---MSL----KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~---~~~----~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +||.|.+||.|-+||...   +..    .....|++.|..++||+..  +|.||+|+.||.|-|||+.+.+.-  +... 
T Consensus        82 lIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q--~nlLASGa~~geI~iWDlnn~~tP--~~~~-  156 (1049)
T KOG0307|consen   82 LIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQ--GNLLASGADDGEILIWDLNKPETP--FTPG-  156 (1049)
T ss_pred             eeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccC--CceeeccCCCCcEEEeccCCcCCC--CCCC-
Confidence            489999999999999865   221    1224578899999999974  689999999999999999985421  1111 


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeee--------ecCC-CCC---CcccC-CCC
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRY--------SSNY-PTQ---RTKPD-IDD  140 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~--------~~~~-~~~---~~~~~-~dg  140 (174)
                      -.+-.+ .|.+++|+.....+||+++.+|++.|||+    |+.++ .-.|.+        ...| |+.   ..++. +|+
T Consensus       157 ~~~~~~-eI~~lsWNrkvqhILAS~s~sg~~~iWDl----r~~~p-ii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~  230 (1049)
T KOG0307|consen  157 SQAPPS-EIKCLSWNRKVSHILASGSPSGRAVIWDL----RKKKP-IIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDS  230 (1049)
T ss_pred             CCCCcc-cceEeccchhhhHHhhccCCCCCceeccc----cCCCc-ccccccCCCccceeeeeeCCCCceeeeeecCCCC
Confidence            113345 89999999988889999999999999999    44432 111111        1122 222   22232 233


Q ss_pred             Cccccc----cccceeeeeeccccceeeeeeCCCCC
Q psy6415         141 IPMGVP----GSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       141 ~~~~~~----~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      .++...    .....++++++|++.|.+|+|+|.+.
T Consensus       231 ~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~  266 (1049)
T KOG0307|consen  231 APVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDP  266 (1049)
T ss_pred             CceeEeecccccCCchhhhcccccceeeeccCCCCc
Confidence            332111    11135788899999999999999763

>KOG2096|consensus

Probab=99.51  E-value=3.2e-13  Score=108.53  Aligned_cols=105  Identities=14%  Similarity=0.157  Sum_probs=79.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC---Ccccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK---TLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~---~~~~~~~~~~~~~~~   76 (174)
                      +|+|++.|.+|.|||++ |+.+.+... ...-+..+.+|++   ..||+++----|++|.+-   .++.........+++
T Consensus       201 ~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~G---RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkG  276 (420)
T KOG2096|consen  201 YIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDG---RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKG  276 (420)
T ss_pred             EEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCC---cEEEEecCCCCceEEEEEeccCcchhhhhhhheecc
Confidence            48999999999999999 665554432 2334456788974   899999988889999963   222111112346789


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      |+. .|.+.+||| +....+|.|.||+++|||..-
T Consensus       277 H~s-aV~~~aFsn-~S~r~vtvSkDG~wriwdtdV  309 (420)
T KOG2096|consen  277 HQS-AVLAAAFSN-SSTRAVTVSKDGKWRIWDTDV  309 (420)
T ss_pred             chh-heeeeeeCC-CcceeEEEecCCcEEEeeccc
Confidence            999 999999999 556789999999999999843

>KOG4328|consensus

Probab=99.51  E-value=1.3e-13  Score=114.75  Aligned_cols=136  Identities=17%  Similarity=0.253  Sum_probs=99.5

Q ss_pred             CEEEEecCCcEEEEECCCCCe-----EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc-------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-----KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG-------   68 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-----~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~-------   68 (174)
                      +||+|..-|+|-+||+++++.     .....|...|.++.|+|..  .+.++++|.||+||+=|+++......       
T Consensus       202 lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n--~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~  279 (498)
T KOG4328|consen  202 LVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPAN--TSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDN  279 (498)
T ss_pred             EEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCC--hhheeeeccCceeeeeeecchhhHHHhhcCccc
Confidence            589999999999999975442     1223466789999999974  57899999999999999986421000       


Q ss_pred             -----------------------ee----------eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc
Q psy6415          69 -----------------------FA----------YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA  115 (174)
Q Consensus        69 -----------------------~~----------~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~  115 (174)
                                             |.          ...+.-|.. -|.+|+++|..+.+|||||.|++++|||+    |.
T Consensus       280 ~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~k-KI~sv~~NP~~p~~laT~s~D~T~kIWD~----R~  354 (498)
T KOG4328|consen  280 IWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKK-KITSVALNPVCPWFLATASLDQTAKIWDL----RQ  354 (498)
T ss_pred             eeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhc-ccceeecCCCCchheeecccCcceeeeeh----hh
Confidence                                   00          001224666 89999999999999999999999999999    20


Q ss_pred             cccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         116 DTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                                         +   .+++.      -+|.++ .|+.+|++..|||++-
T Consensus       355 -------------------l---~~K~s------p~lst~-~HrrsV~sAyFSPs~g  382 (498)
T KOG4328|consen  355 -------------------L---RGKAS------PFLSTL-PHRRSVNSAYFSPSGG  382 (498)
T ss_pred             -------------------h---cCCCC------cceecc-cccceeeeeEEcCCCC
Confidence                               0   11110      134444 7999999999999874

>KOG0973|consensus

Probab=99.50  E-value=1.9e-13  Score=122.69  Aligned_cols=131  Identities=13%  Similarity=0.210  Sum_probs=103.2

Q ss_pred             EEEEe--cCCcEEEEECCCCC-------------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc---
Q psy6415           2 VVAGY--DNGDLKMFDLKTMS-------------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL---   63 (174)
Q Consensus         2 lasgs--~Dg~iklWDl~~~~-------------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~---   63 (174)
                      +|||+  .||.+.||+...--             +-+...|...|++|.|+|++   .+||+||+|+.|.||+....   
T Consensus        28 ~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG---~~lAsGSDD~~v~iW~~~~~~~~  104 (942)
T KOG0973|consen   28 FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDG---SYLASGSDDRLVMIWERAEIGSG  104 (942)
T ss_pred             EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCC---CeEeeccCcceEEEeeecccCCc
Confidence            68898  89999999875311             01223567889999999975   99999999999999998831   


Q ss_pred             -c--------cccc-eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCC
Q psy6415          64 -H--------REKG-FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQR  133 (174)
Q Consensus        64 -~--------~~~~-~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~  133 (174)
                       .        .+.. .....+.+|.. .|..|.|+| +..+|||+|-|++|-||+..                       
T Consensus       105 ~~fgs~g~~~~vE~wk~~~~l~~H~~-DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~-----------------------  159 (942)
T KOG0973|consen  105 TVFGSTGGAKNVESWKVVSILRGHDS-DVLDVNWSP-DDSLLVSVSLDNSVIIWNAK-----------------------  159 (942)
T ss_pred             ccccccccccccceeeEEEEEecCCC-ccceeccCC-CccEEEEecccceEEEEccc-----------------------
Confidence             0        0000 12345679999 999999999 56799999999999999991                       


Q ss_pred             cccCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         134 TKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       134 ~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                                    +.+++..+.+|+..|-.+.|-|=|+.|
T Consensus       160 --------------tF~~~~vl~~H~s~VKGvs~DP~Gky~  186 (942)
T KOG0973|consen  160 --------------TFELLKVLRGHQSLVKGVSWDPIGKYF  186 (942)
T ss_pred             --------------cceeeeeeecccccccceEECCccCee
Confidence                          235789999999999999999988754

>KOG0299|consensus

Probab=99.50  E-value=4.1e-13  Score=111.67  Aligned_cols=131  Identities=16%  Similarity=0.187  Sum_probs=96.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee--ee-----
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL--SE-----   74 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~--~~-----   74 (174)
                      +-.|+.|.++++|++..........+...+-+++|-.+    ..++|||.||.|.||++.+.+++..+...  ..     
T Consensus       301 vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~----~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~  376 (479)
T KOG0299|consen  301 VTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND----EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDP  376 (479)
T ss_pred             EEeccccceeEEEeccccceeeeeCCCCCeeeEEEecc----cceeeccCCceEEEeeecccCceeEeeccccccCCccc
Confidence            34566999999999965444444455667889998754    78999999999999999988765332210  00     


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                      .+++. +|++|+..| +.++|||||.+|.|+||.++                            +|-.     +.+++.+
T Consensus       377 ~~~~~-Witsla~i~-~sdL~asGS~~G~vrLW~i~----------------------------~g~r-----~i~~l~~  421 (479)
T KOG0299|consen  377 VNGNF-WITSLAVIP-GSDLLASGSWSGCVRLWKIE----------------------------DGLR-----AINLLYS  421 (479)
T ss_pred             ccccc-ceeeeEecc-cCceEEecCCCCceEEEEec----------------------------CCcc-----ccceeee
Confidence            12334 788999999 77899999999999999992                            2210     2346666


Q ss_pred             eeccccceeeeeeCCCCC
Q psy6415         155 ATLSSQPINSLDWSADKL  172 (174)
Q Consensus       155 ~~~h~~~V~~l~~spd~~  172 (174)
                      +. =...|++|+|+++|+
T Consensus       422 ls-~~GfVNsl~f~~sgk  438 (479)
T KOG0299|consen  422 LS-LVGFVNSLAFSNSGK  438 (479)
T ss_pred             cc-cccEEEEEEEccCCC
Confidence            65 357899999999987

>KOG0307|consensus

Probab=99.50  E-value=5.5e-14  Score=126.76  Aligned_cols=129  Identities=12%  Similarity=0.228  Sum_probs=101.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCC---CEEEEEecCCCCCCCEEEEEeCCC---cEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN---GVCGVDFDRRDIPMNKLVATTLEA---KLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~---~V~sv~f~~~~~~~~~l~s~s~Dg---~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +||+|+.+|++-|||+|..+.+..+....   .+.+|+|||++  -.+|+++++|.   .|++||+|....    .+.++
T Consensus       176 ILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~--aTql~~As~dd~~PviqlWDlR~ass----P~k~~  249 (1049)
T KOG0307|consen  176 ILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDH--ATQLLVASGDDSAPVIQLWDLRFASS----PLKIL  249 (1049)
T ss_pred             HhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCC--ceeeeeecCCCCCceeEeecccccCC----chhhh
Confidence            47899999999999999887665544333   37899999986  36787777554   599999997542    23445


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                      .+|+. .|.++.|.|.|..+++|++.|++|.+|+.+                                     ++|.+.+
T Consensus       250 ~~H~~-GilslsWc~~D~~lllSsgkD~~ii~wN~~-------------------------------------tgEvl~~  291 (1049)
T KOG0307|consen  250 EGHQR-GILSLSWCPQDPRLLLSSGKDNRIICWNPN-------------------------------------TGEVLGE  291 (1049)
T ss_pred             ccccc-ceeeeccCCCCchhhhcccCCCCeeEecCC-------------------------------------CceEeee
Confidence            68998 999999999998999999999999999992                                     2456667


Q ss_pred             eeccccceeeeeeCCCCCC
Q psy6415         155 ATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       155 ~~~h~~~V~~l~~spd~~~  173 (174)
                      +....+++.++.|+|-.++
T Consensus       292 ~p~~~nW~fdv~w~pr~P~  310 (1049)
T KOG0307|consen  292 LPAQGNWCFDVQWCPRNPS  310 (1049)
T ss_pred             cCCCCcceeeeeecCCCcc
Confidence            7677788888888886554

>KOG0278|consensus

Probab=99.49  E-value=2.1e-13  Score=106.59  Aligned_cols=99  Identities=20%  Similarity=0.362  Sum_probs=85.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +++-+.-+.|++||.++-.++.....+-.|.+.+.+|+.   +.++.|++|..++.||..+++.+..+    .++|.+ +
T Consensus       198 ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k---~~fVaGged~~~~kfDy~TgeEi~~~----nkgh~g-p  269 (334)
T KOG0278|consen  198 ILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKK---EFFVAGGEDFKVYKFDYNTGEEIGSY----NKGHFG-P  269 (334)
T ss_pred             EEEEecCceeEEeccccccceeeccCccccccccccCCC---ceEEecCcceEEEEEeccCCceeeec----ccCCCC-c
Confidence            456667789999999998888777777889999999974   78999999999999999998754322    268999 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.+|+|+| ++.+.|+||+||+|+||..
T Consensus       270 VhcVrFSP-dGE~yAsGSEDGTirlWQt  296 (334)
T KOG0278|consen  270 VHCVRFSP-DGELYASGSEDGTIRLWQT  296 (334)
T ss_pred             eEEEEECC-CCceeeccCCCceEEEEEe
Confidence            99999999 5678999999999999998

>KOG1034|consensus

Probab=99.49  E-value=1.3e-13  Score=110.94  Aligned_cols=104  Identities=16%  Similarity=0.264  Sum_probs=88.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||.|+.=|-|+|.|+.++++... ..|...|+.|.|.|..  .++++++|.|-+|||||+++..|+..|  .-..+|.+
T Consensus       107 ~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~--~qlvls~SkD~svRlwnI~~~~Cv~Vf--GG~egHrd  182 (385)
T KOG1034|consen  107 FLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDR--PQLVLSASKDHSVRLWNIQTDVCVAVF--GGVEGHRD  182 (385)
T ss_pred             eEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCC--CcEEEEecCCceEEEEeccCCeEEEEe--cccccccC
Confidence            467777889999999998887654 4678889999999974  579999999999999999998775322  23468999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                       +|.+|.|+++ +..|||||.|.++++|++.
T Consensus       183 -eVLSvD~~~~-gd~i~ScGmDhslk~W~l~  211 (385)
T KOG1034|consen  183 -EVLSVDFSLD-GDRIASCGMDHSLKLWRLN  211 (385)
T ss_pred             -cEEEEEEcCC-CCeeeccCCcceEEEEecC
Confidence             9999999995 5689999999999999994

>KOG0300|consensus

Probab=99.48  E-value=3.7e-13  Score=108.35  Aligned_cols=129  Identities=12%  Similarity=0.213  Sum_probs=103.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCC--------------------------------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDI--------------------------------------   41 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~--------------------------------------   41 (174)
                      ++.+++.|.+.+||.+.++.|+... .|.+.|++|.|++.+-                                      
T Consensus       162 i~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e  241 (481)
T KOG0300|consen  162 ICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEE  241 (481)
T ss_pred             ceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhh
Confidence            3678999999999999999998765 4778899999997541                                      


Q ss_pred             -----------------------------------------CCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415          42 -----------------------------------------PMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus        42 -----------------------------------------~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                                                               .+++++++|.|.+..+||+++++.     ++.+.+|.. 
T Consensus       242 ~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~-----v~~LtGHd~-  315 (481)
T KOG0300|consen  242 HSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEV-----VNILTGHDS-  315 (481)
T ss_pred             cccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCce-----eccccCcch-
Confidence                                                     134677888888888888887653     345568988 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      ++..+.-|| .+.+++|+|.|-+.+|||+    |..                                ..-+..|.||+.
T Consensus       316 ELtHcstHp-tQrLVvTsSrDtTFRLWDF----Rea--------------------------------I~sV~VFQGHtd  358 (481)
T KOG0300|consen  316 ELTHCSTHP-TQRLVVTSSRDTTFRLWDF----REA--------------------------------IQSVAVFQGHTD  358 (481)
T ss_pred             hccccccCC-cceEEEEeccCceeEeccc----hhh--------------------------------cceeeeeccccc
Confidence            999999999 5679999999999999999    211                                123778899999


Q ss_pred             ceeeeeeCCCCC
Q psy6415         161 PINSLDWSADKL  172 (174)
Q Consensus       161 ~V~~l~~spd~~  172 (174)
                      .|.+..|+-|.+
T Consensus       359 tVTS~vF~~dd~  370 (481)
T KOG0300|consen  359 TVTSVVFNTDDR  370 (481)
T ss_pred             ceeEEEEecCCc
Confidence            999999988754

>KOG0293|consensus

Probab=99.47  E-value=1e-13  Score=114.38  Aligned_cols=97  Identities=14%  Similarity=0.316  Sum_probs=74.9

Q ss_pred             EecCCcEEEEECCCCCeEEE-eecCCC--EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           5 GYDNGDLKMFDLKTMSLKWE-TNLKNG--VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~~~-~~~~~~--V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      --.+..|.+||++...++.. ..|+.+  |-.-.|-..  +...+|+||+|+.|+||+.+++.     ++..+.+|.. .
T Consensus       413 nL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~--~~~fiaSGSED~kvyIWhr~sgk-----ll~~LsGHs~-~  484 (519)
T KOG0293|consen  413 NLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGG--NDKFIASGSEDSKVYIWHRISGK-----LLAVLSGHSK-T  484 (519)
T ss_pred             EcccCeeEEeecchhhHHHHhhcccccceEEEeccCCC--CcceEEecCCCceEEEEEccCCc-----eeEeecCCcc-e
Confidence            34567889999986655433 344444  222345432  23678999999999999999865     4556789999 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |++|+|+|.++.+|||||.||+||||..
T Consensus       485 vNcVswNP~~p~m~ASasDDgtIRIWg~  512 (519)
T KOG0293|consen  485 VNCVSWNPADPEMFASASDDGTIRIWGP  512 (519)
T ss_pred             eeEEecCCCCHHHhhccCCCCeEEEecC
Confidence            9999999999999999999999999988

>KOG0322|consensus

Probab=99.47  E-value=2.3e-13  Score=106.92  Aligned_cols=102  Identities=24%  Similarity=0.384  Sum_probs=78.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-----------eecCCCEEEEEecCCCC----------------------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-----------TNLKNGVCGVDFDRRDI----------------------------   41 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-----------~~~~~~V~sv~f~~~~~----------------------------   41 (174)
                      +|++|+++|.|-+||+.++..+..           ..|.+.|.+|+|.+.-.                            
T Consensus       167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e  246 (323)
T KOG0322|consen  167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE  246 (323)
T ss_pred             EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccce
Confidence            478999999999999998732211           12445566666543110                            


Q ss_pred             ---------------CCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEE
Q psy6415          42 ---------------PMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNL  106 (174)
Q Consensus        42 ---------------~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~l  106 (174)
                                     ++..+||++.|+.||||.-|+..++     ..++-|++ .|++|+|+| +..++|+||.|++|.|
T Consensus       247 ~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL-----AVLkyHsa-gvn~vAfsp-d~~lmAaaskD~rISL  319 (323)
T KOG0322|consen  247 ITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL-----AVLKYHSA-GVNAVAFSP-DCELMAAASKDARISL  319 (323)
T ss_pred             EEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch-----hhhhhhhc-ceeEEEeCC-CCchhhhccCCceEEe
Confidence                           3568899999999999999997754     34568998 999999999 4569999999999999


Q ss_pred             Eec
Q psy6415         107 WQL  109 (174)
Q Consensus       107 Wd~  109 (174)
                      |++
T Consensus       320 WkL  322 (323)
T KOG0322|consen  320 WKL  322 (323)
T ss_pred             eec
Confidence            997

>KOG0290|consensus

Probab=99.47  E-value=7.9e-13  Score=105.13  Aligned_cols=163  Identities=17%  Similarity=0.287  Sum_probs=105.2

Q ss_pred             EEEEecCCcEEEEECCC--CCeEE--------EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee
Q psy6415           2 VVAGYDNGDLKMFDLKT--MSLKW--------ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY   71 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~--~~~~~--------~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~   71 (174)
                      |||.+  -.+|||.+..  .+...        ...+...++|.+|+.-  +.++|.++|-|-|..|||++++..  +..-
T Consensus       116 LATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~--dp~~igtSSiDTTCTiWdie~~~~--~~vk  189 (364)
T KOG0290|consen  116 LATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEV--DPNLIGTSSIDTTCTIWDIETGVS--GTVK  189 (364)
T ss_pred             hhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccC--CcceeEeecccCeEEEEEEeeccc--ccee
Confidence            44443  5799998863  22211        1123467899999864  468999999999999999998632  1111


Q ss_pred             eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc-ccc----cccc-ccceeeeecCC--CCCCcccCCCCCcc
Q psy6415          72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS-ALR----ADTN-LCSIFRYSSNY--PTQRTKPDIDDIPM  143 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~-~~~----~~~~-~~~~~~~~~~~--~~~~~~~~~dg~~~  143 (174)
                      ..+.+|.. +|+.|+|...+.++|||.|.||+|++||+.+ .+-    +++. ..-++|+..+-  |-..+.+-+|...+
T Consensus       190 TQLIAHDK-EV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V  268 (364)
T KOG0290|consen  190 TQLIAHDK-EVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKV  268 (364)
T ss_pred             eEEEecCc-ceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceE
Confidence            23459998 9999999997788999999999999999932 000    1111 11223433322  11111122333222


Q ss_pred             cc---ccccceeeeeeccccceeeeeeCCCC
Q psy6415         144 GV---PGSLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       144 ~~---~~~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                      -+   --.+..+.++.+|+..|+.|+|.|..
T Consensus       269 ~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS  299 (364)
T KOG0290|consen  269 VILDIRVPCTPVARLRNHQASVNGIAWAPHS  299 (364)
T ss_pred             EEEEecCCCcceehhhcCcccccceEecCCC
Confidence            11   13345688999999999999999975

>KOG1539|consensus

Probab=99.47  E-value=2.2e-13  Score=119.90  Aligned_cols=126  Identities=21%  Similarity=0.323  Sum_probs=102.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .++|++.||.+++||.+...+.........+..+..++..   ..+|++-+|=.|+++|+.+...++     .+.+|++ 
T Consensus       507 ~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s---~l~a~~~ddf~I~vvD~~t~kvvR-----~f~gh~n-  577 (910)
T KOG1539|consen  507 LLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVS---DLLAIALDDFSIRVVDVVTRKVVR-----EFWGHGN-  577 (910)
T ss_pred             eEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehh---hhhhhhcCceeEEEEEchhhhhhH-----Hhhcccc-
Confidence            3789999999999999988776666666777788887753   678899999999999998865444     3469999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|++..||| ++..|++++.|++|++||+                    |                 ++.++..+.- ..
T Consensus       578 ritd~~FS~-DgrWlisasmD~tIr~wDl--------------------p-----------------t~~lID~~~v-d~  618 (910)
T KOG1539|consen  578 RITDMTFSP-DGRWLISASMDSTIRTWDL--------------------P-----------------TGTLIDGLLV-DS  618 (910)
T ss_pred             ceeeeEeCC-CCcEEEEeecCCcEEEEec--------------------c-----------------CcceeeeEec-CC
Confidence            999999999 5679999999999999999                    1                 2345655533 68


Q ss_pred             ceeeeeeCCCCCCC
Q psy6415         161 PINSLDWSADKLGL  174 (174)
Q Consensus       161 ~V~~l~~spd~~~~  174 (174)
                      |+.+|.|||+|..|
T Consensus       619 ~~~sls~SPngD~L  632 (910)
T KOG1539|consen  619 PCTSLSFSPNGDFL  632 (910)
T ss_pred             cceeeEECCCCCEE
Confidence            88999999998754

>KOG0308|consensus

Probab=99.47  E-value=3.8e-13  Score=115.85  Aligned_cols=130  Identities=15%  Similarity=0.223  Sum_probs=99.6

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEe-cCCCCCCCEEEEEeCCCcEEEEECCCccc--ccce---ee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDF-DRRDIPMNKLVATTLEAKLFVFDLKTLHR--EKGF---AY   71 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f-~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~--~~~~---~~   71 (174)
                      .|+|+|.|-+||+|+...+.  +... ..|.+=|.+|++ -++   ...+|+|+.|+.|.|||+.++..  +..+   ..
T Consensus        87 tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~---~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~  163 (735)
T KOG0308|consen   87 TLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKN---NELVASGGLDRKIFLWDINTGTATLVASFNNVTV  163 (735)
T ss_pred             ceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccC---ceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence            37899999999999997764  3222 246677999988 443   26789999999999999997632  1111   11


Q ss_pred             eeec-ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccc
Q psy6415          72 LSEK-AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT  150 (174)
Q Consensus        72 ~~~~-~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~  150 (174)
                      ..+. ++.. +|++++.+| .+.+|++||.++.+++||-    |                                 +++
T Consensus       164 ~sl~sG~k~-siYSLA~N~-t~t~ivsGgtek~lr~wDp----r---------------------------------t~~  204 (735)
T KOG0308|consen  164 NSLGSGPKD-SIYSLAMNQ-TGTIIVSGGTEKDLRLWDP----R---------------------------------TCK  204 (735)
T ss_pred             ccCCCCCcc-ceeeeecCC-cceEEEecCcccceEEecc----c---------------------------------ccc
Confidence            1222 7788 999999999 5689999999999999999    1                                 234


Q ss_pred             eeeeeeccccceeeeeeCCCCC
Q psy6415         151 LLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       151 ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      .+..+.||+.-|+.|-.++||.
T Consensus       205 kimkLrGHTdNVr~ll~~dDGt  226 (735)
T KOG0308|consen  205 KIMKLRGHTDNVRVLLVNDDGT  226 (735)
T ss_pred             ceeeeeccccceEEEEEcCCCC
Confidence            5777889999999999999984

>KOG0270|consensus

Probab=99.47  E-value=7.3e-13  Score=109.83  Aligned_cols=102  Identities=20%  Similarity=0.285  Sum_probs=86.9

Q ss_pred             CEEEEecCCcEEEEECCCCCe-EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.|++|+|.|.|.-.. -......+.|-.|+|+|..  .+.+++++.||+|+-+|+|+..    .++.++++|.+
T Consensus       301 ~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~s--e~~f~~~tddG~v~~~D~R~~~----~~vwt~~AHd~  374 (463)
T KOG0270|consen  301 VLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHS--ENSFFVSTDDGTVYYFDIRNPG----KPVWTLKAHDD  374 (463)
T ss_pred             EEEeccccceEEeeeccCccccCceEEeccceEEEEecCCC--ceeEEEecCCceEEeeecCCCC----CceeEEEeccC
Confidence            478999999999999994221 2233446789999999974  5889999999999999999863    34667889999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       +|.++.+++..+.+++|+|.|++|+||++
T Consensus       375 -~ISgl~~n~~~p~~l~t~s~d~~Vklw~~  403 (463)
T KOG0270|consen  375 -EISGLSVNIQTPGLLSTASTDKVVKLWKF  403 (463)
T ss_pred             -CcceEEecCCCCcceeeccccceEEEEee
Confidence             99999999999999999999999999999

>KOG0640|consensus

Probab=99.46  E-value=9.8e-13  Score=105.54  Aligned_cols=103  Identities=16%  Similarity=0.332  Sum_probs=86.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE----eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE----TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~----~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|+.|-+-.++++||+++.++-..    ..|.+.|++|.+++.+   +..+|||.||.|||||--.+.|+..+.    ++
T Consensus       230 fllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~---~lYvTaSkDG~IklwDGVS~rCv~t~~----~A  302 (430)
T KOG0640|consen  230 FLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTG---SLYVTASKDGAIKLWDGVSNRCVRTIG----NA  302 (430)
T ss_pred             eEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCc---cEEEEeccCCcEEeeccccHHHHHHHH----hh
Confidence            477889999999999999887543    2467889999999974   889999999999999987777765443    47


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      |.+.+|.+..|.. ++.++.|.|.|..|+||.+-+
T Consensus       303 H~gsevcSa~Ftk-n~kyiLsSG~DS~vkLWEi~t  336 (430)
T KOG0640|consen  303 HGGSEVCSAVFTK-NGKYILSSGKDSTVKLWEIST  336 (430)
T ss_pred             cCCceeeeEEEcc-CCeEEeecCCcceeeeeeecC
Confidence            8766899999998 667889999999999999944

>KOG0643|consensus

Probab=99.46  E-value=1.9e-12  Score=101.99  Aligned_cols=62  Identities=10%  Similarity=0.100  Sum_probs=52.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR   65 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~   65 (174)
                      +|.|++.|.++.+|=--.|+.+-+ ..|.+.|.+++.+.+.   ..++|||.|.++||||+.++++
T Consensus        24 LlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s---~~liTGSAD~t~kLWDv~tGk~   86 (327)
T KOG0643|consen   24 LLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDS---KHLITGSADQTAKLWDVETGKQ   86 (327)
T ss_pred             EEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCc---ceeeeccccceeEEEEcCCCcE
Confidence            588999999999998766666554 4578899999988763   7899999999999999999764

>KOG0303|consensus

Probab=99.46  E-value=1.5e-13  Score=112.71  Aligned_cols=107  Identities=12%  Similarity=0.218  Sum_probs=86.2

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc--ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK--GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS  103 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~--~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~  103 (174)
                      .|...|..++|+|..  -+.|||||+|.+|+||++..+-..+  ......+.+|+. .|--|+|||.-.++|+|+|.|.+
T Consensus        79 GHt~~vLDi~w~Pfn--D~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~r-rVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   79 GHTAPVLDIDWCPFN--DCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQR-RVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccccccccccCccC--CceeecCCCCceEEEEECCCcccccCcccceEEEeecce-eEEEEeecccchhhHhhccCCce
Confidence            467889999999974  5789999999999999997542211  112446779999 99999999998999999999999


Q ss_pred             EEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         104 LNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       104 V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      |.||++                                     ++++-+-++. |..-|.+++||-||.-
T Consensus       156 v~iWnv-------------------------------------~tgeali~l~-hpd~i~S~sfn~dGs~  187 (472)
T KOG0303|consen  156 VSIWNV-------------------------------------GTGEALITLD-HPDMVYSMSFNRDGSL  187 (472)
T ss_pred             EEEEec-------------------------------------cCCceeeecC-CCCeEEEEEeccCCce
Confidence            999999                                     1233445565 9999999999999854

>KOG1007|consensus

Probab=99.45  E-value=6.2e-13  Score=105.69  Aligned_cols=123  Identities=20%  Similarity=0.377  Sum_probs=93.9

Q ss_pred             EecCCcEEEEECCCCCeE-EEe------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           5 GYDNGDLKMFDLKTMSLK-WET------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~-~~~------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +-.|..|.+|++..+..+ ...      .+.....+-+|+|+. +++.+++. .|++++.||+|+.++.-    ....+|
T Consensus       140 sm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHH-dgnqv~tt-~d~tl~~~D~RT~~~~~----sI~dAH  213 (370)
T KOG1007|consen  140 SMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHH-DGNQVATT-SDSTLQFWDLRTMKKNN----SIEDAH  213 (370)
T ss_pred             EeccCceEEEEcccCcchheeecccccccccceecccccCCCC-ccceEEEe-CCCcEEEEEccchhhhc----chhhhh
Confidence            345899999999876542 211      123457788999954 56777765 58899999999876431    122478


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. -|.++.|+|.-+.+||||+.||.|+|||.    |..                                ...++++.+
T Consensus       214 gq-~vrdlDfNpnkq~~lvt~gDdgyvriWD~----R~t--------------------------------k~pv~el~~  256 (370)
T KOG1007|consen  214 GQ-RVRDLDFNPNKQHILVTCGDDGYVRIWDT----RKT--------------------------------KFPVQELPG  256 (370)
T ss_pred             cc-eeeeccCCCCceEEEEEcCCCccEEEEec----cCC--------------------------------CccccccCC
Confidence            77 89999999987789999999999999999    322                                124889999


Q ss_pred             cccceeeeeeCCC
Q psy6415         158 SSQPINSLDWSAD  170 (174)
Q Consensus       158 h~~~V~~l~~spd  170 (174)
                      |+.+|+++-|+|-
T Consensus       257 HsHWvW~VRfn~~  269 (370)
T KOG1007|consen  257 HSHWVWAVRFNPE  269 (370)
T ss_pred             CceEEEEEEecCc
Confidence            9999999999994

>KOG1445|consensus

Probab=99.45  E-value=1.6e-13  Score=118.31  Aligned_cols=101  Identities=15%  Similarity=0.250  Sum_probs=83.6

Q ss_pred             EEEEecCCcEEEEECCCCCeE-------E-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLK-------W-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~-------~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      ||.|.+||.|+||.+..+.+.       . ...|.+.|+++.|+|-.  .+.|++++.|.+|+|||+++....     ..
T Consensus       643 LAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLA--advLa~asyd~Ti~lWDl~~~~~~-----~~  715 (1012)
T KOG1445|consen  643 LAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLA--ADVLAVASYDSTIELWDLANAKLY-----SR  715 (1012)
T ss_pred             eeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchh--hhHhhhhhccceeeeeehhhhhhh-----he
Confidence            789999999999999765431       1 12466789999999975  478999999999999999986532     24


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      +.+|++ .|.+++||| ++..+||-+.||+|++|.-.+
T Consensus       716 l~gHtd-qIf~~AWSp-dGr~~AtVcKDg~~rVy~Prs  751 (1012)
T KOG1445|consen  716 LVGHTD-QIFGIAWSP-DGRRIATVCKDGTLRVYEPRS  751 (1012)
T ss_pred             eccCcC-ceeEEEECC-CCcceeeeecCceEEEeCCCC
Confidence            569999 999999999 567889999999999999843

>KOG0300|consensus

Probab=99.44  E-value=8.6e-13  Score=106.22  Aligned_cols=98  Identities=11%  Similarity=0.172  Sum_probs=81.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++|+.|.+..+||+.++..+..+ .|...++-.+-+|.   +..++++|.|.+.|+||+|..  ++  .+..+.+|+. 
T Consensus       287 ~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHpt---QrLVvTsSrDtTFRLWDFRea--I~--sV~VFQGHtd-  358 (481)
T KOG0300|consen  287 MVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPT---QRLVVTSSRDTTFRLWDFREA--IQ--SVAVFQGHTD-  358 (481)
T ss_pred             eeeeeccccceeeeeccCceeccccCcchhccccccCCc---ceEEEEeccCceeEeccchhh--cc--eeeeeccccc-
Confidence            689999999999999999987654 46677888888885   356679999999999999953  22  2345679999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|.++.|.-++  -+++||.|.+||+||+
T Consensus       359 tVTS~vF~~dd--~vVSgSDDrTvKvWdL  385 (481)
T KOG0300|consen  359 TVTSVVFNTDD--RVVSGSDDRTVKVWDL  385 (481)
T ss_pred             ceeEEEEecCC--ceeecCCCceEEEeee
Confidence            99999999843  4699999999999999

>KOG0639|consensus

Probab=99.44  E-value=4.9e-13  Score=112.74  Aligned_cols=159  Identities=14%  Similarity=0.138  Sum_probs=108.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec---CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL---KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~---~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      |++|+.-.+|.|||+.+-........   .-..++++.+|+.   +...++..||.|.|||++++..     +..+.+|+
T Consensus       480 LivGGeastlsiWDLAapTprikaeltssapaCyALa~spDa---kvcFsccsdGnI~vwDLhnq~~-----VrqfqGht  551 (705)
T KOG0639|consen  480 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDA---KVCFSCCSDGNIAVWDLHNQTL-----VRQFQGHT  551 (705)
T ss_pred             EEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCcc---ceeeeeccCCcEEEEEccccee-----eecccCCC
Confidence            67888899999999976554322211   2347789999974   7788999999999999999754     44567999


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccc--ccceeeeecCC-CCCCccc--CCCCCccccccccceee
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTN--LCSIFRYSSNY-PTQRTKP--DIDDIPMGVPGSLTLLQ  153 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~--~~dg~~~~~~~~~~ll~  153 (174)
                      + .+.+|..++ ++.-|=|||-|.+|+-||+..-.+..+.  .+++|.  -.| |.+.=++  =+.+.+.....+..--.
T Consensus       552 D-GascIdis~-dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfS--Lg~cP~~dWlavGMens~vevlh~skp~ky  627 (705)
T KOG0639|consen  552 D-GASCIDISK-DGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFS--LGYCPTGDWLAVGMENSNVEVLHTSKPEKY  627 (705)
T ss_pred             C-CceeEEecC-CCceeecCCCccceeehhhhhhhhhhhhhhhhhhee--cccCCCccceeeecccCcEEEEecCCccce
Confidence            9 999999999 5667899999999999999332222222  334444  445 5432111  12221111111222345


Q ss_pred             eeeccccceeeeeeCCCCC
Q psy6415         154 EATLSSQPINSLDWSADKL  172 (174)
Q Consensus       154 ~~~~h~~~V~~l~~spd~~  172 (174)
                      .+..|++-|.+|.|++-|+
T Consensus       628 qlhlheScVLSlKFa~cGk  646 (705)
T KOG0639|consen  628 QLHLHESCVLSLKFAYCGK  646 (705)
T ss_pred             eecccccEEEEEEecccCc
Confidence            5677999999999999876

>KOG0646|consensus

Probab=99.44  E-value=1.6e-12  Score=108.26  Aligned_cols=104  Identities=16%  Similarity=0.245  Sum_probs=86.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc-----------cccee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR-----------EKGFA   70 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~-----------~~~~~   70 (174)
                      |+|+|.|.++|+||+..+.++.....+..+.+++.+|-.   ..+..|+.+|.|.+.++.+...           .....
T Consensus       191 l~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae---~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~  267 (476)
T KOG0646|consen  191 LYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAE---RVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQ  267 (476)
T ss_pred             EEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccc---cEEEecCCcceEEeeehhcCCcccccccccccccccce
Confidence            789999999999999999998888888999999999963   7889999999999999875431           11112


Q ss_pred             eeeecccCc-CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          71 YLSEKAHKA-TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        71 ~~~~~~h~~-~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...+.+|.+ .+|.+++.+- |+.+|++|+.||+|.+||+
T Consensus       268 ~~~~~Gh~~~~~ITcLais~-DgtlLlSGd~dg~VcvWdi  306 (476)
T KOG0646|consen  268 INVLVGHENESAITCLAIST-DGTLLLSGDEDGKVCVWDI  306 (476)
T ss_pred             eeeeccccCCcceeEEEEec-CccEEEeeCCCCCEEEEec
Confidence            334557765 3899999998 6789999999999999999

>KOG0294|consensus

Probab=99.42  E-value=2.6e-12  Score=102.96  Aligned_cols=123  Identities=13%  Similarity=0.283  Sum_probs=94.4

Q ss_pred             EEEEecCCcEEEEECCCCC------eE------EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMS------LK------WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG   68 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~------~~------~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~   68 (174)
                      |+.|+....|.-+++.-..      +.      +. ..|...|.+||.+.     .++|+||.|-+|+|||+++...   
T Consensus         4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~-----~~~aSGssDetI~IYDm~k~~q---   75 (362)
T KOG0294|consen    4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSG-----PYVASGSSDETIHIYDMRKRKQ---   75 (362)
T ss_pred             EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecc-----eeEeccCCCCcEEEEeccchhh---
Confidence            5667766666666653211      11      11 24668899999985     7899999999999999998653   


Q ss_pred             eeeeeecccCcCcEEEEEEcCCC-CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415          69 FAYLSEKAHKATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG  147 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~  147 (174)
                        +..+..|.+ .|+++.|.|.- ...|.+|+.||.|.+|+.                                     +
T Consensus        76 --lg~ll~Hag-sitaL~F~~~~S~shLlS~sdDG~i~iw~~-------------------------------------~  115 (362)
T KOG0294|consen   76 --LGILLSHAG-SITALKFYPPLSKSHLLSGSDDGHIIIWRV-------------------------------------G  115 (362)
T ss_pred             --hcceecccc-ceEEEEecCCcchhheeeecCCCcEEEEEc-------------------------------------C
Confidence              334457888 99999998831 227899999999999999                                     1


Q ss_pred             ccceeeeeeccccceeeeeeCCCCC
Q psy6415         148 SLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       148 ~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      .-+++.++.+|...|+.|+.+|.++
T Consensus       116 ~W~~~~slK~H~~~Vt~lsiHPS~K  140 (362)
T KOG0294|consen  116 SWELLKSLKAHKGQVTDLSIHPSGK  140 (362)
T ss_pred             CeEEeeeecccccccceeEecCCCc
Confidence            2468999999999999999999875

>KOG1273|consensus

Probab=99.42  E-value=3.2e-12  Score=102.67  Aligned_cols=99  Identities=18%  Similarity=0.298  Sum_probs=80.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||.|..||.|-|||+.|...... ..|..+|++++|++++   ..|+|+|.|..|++||+..+.+++.+      .-.+
T Consensus        37 ~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dg---r~LltsS~D~si~lwDl~~gs~l~ri------rf~s  107 (405)
T KOG1273|consen   37 YLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDG---RKLLTSSRDWSIKLWDLLKGSPLKRI------RFDS  107 (405)
T ss_pred             eeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCC---CEeeeecCCceeEEEeccCCCceeEE------EccC
Confidence            489999999999999988765444 3577899999999975   99999999999999999998876543      2345


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       +||.+.|||.+.+.++.+=.+..-.+=++
T Consensus       108 -pv~~~q~hp~k~n~~va~~~~~sp~vi~~  136 (405)
T KOG1273|consen  108 -PVWGAQWHPRKRNKCVATIMEESPVVIDF  136 (405)
T ss_pred             -ccceeeeccccCCeEEEEEecCCcEEEEe
Confidence             99999999988777766655555555555

>KOG4378|consensus

Probab=99.41  E-value=8.2e-13  Score=111.22  Aligned_cols=127  Identities=17%  Similarity=0.338  Sum_probs=100.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC-
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK-   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~-   78 (174)
                      ++++|+..++|||||++...+... ..|+..|..|.++-.+   .+||+++..|-|-|..+.++.....|      .|. 
T Consensus        93 y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~D---eyiAsvs~gGdiiih~~~t~~~tt~f------~~~s  163 (673)
T KOG4378|consen   93 YEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTD---EYIASVSDGGDIIIHGTKTKQKTTTF------TIDS  163 (673)
T ss_pred             eeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCc---ceeEEeccCCcEEEEecccCccccce------ecCC
Confidence            478999999999999996665544 4577889999999875   78999999999999999886533222      222 


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      ++.|.-+.|||....+|.++|.+|.|.|||+                             .|       +....+-.+.|
T Consensus       164 gqsvRll~ys~skr~lL~~asd~G~VtlwDv-----------------------------~g-------~sp~~~~~~~H  207 (673)
T KOG4378|consen  164 GQSVRLLRYSPSKRFLLSIASDKGAVTLWDV-----------------------------QG-------MSPIFHASEAH  207 (673)
T ss_pred             CCeEEEeecccccceeeEeeccCCeEEEEec-----------------------------cC-------CCcccchhhhc
Confidence            3367899999998889999999999999999                             22       12234555778


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      +.|...|+|||..+
T Consensus       208 sAP~~gicfspsne  221 (673)
T KOG4378|consen  208 SAPCRGICFSPSNE  221 (673)
T ss_pred             cCCcCcceecCCcc
Confidence            99999999998654

>KOG0268|consensus

Probab=99.40  E-value=6.2e-13  Score=108.22  Aligned_cols=100  Identities=17%  Similarity=0.295  Sum_probs=84.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|++|..|+.|-|+|+|++..+......-.-+.|+|||.   ...+++|++|..+..+|+|..+.    ++.....|-+ 
T Consensus       202 ILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPe---afnF~~a~ED~nlY~~DmR~l~~----p~~v~~dhvs-  273 (433)
T KOG0268|consen  202 ILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPE---AFNFVAANEDHNLYTYDMRNLSR----PLNVHKDHVS-  273 (433)
T ss_pred             heeeeccCCceEEEecccCCccceeeeeccccceecCcc---ccceeeccccccceehhhhhhcc----cchhhcccce-
Confidence            488999999999999999988766555566788999995   37789999999999999998642    2334468888 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|.+|.|||. ++-|+|||.|.+|+||.+
T Consensus       274 AV~dVdfspt-G~EfvsgsyDksIRIf~~  301 (433)
T KOG0268|consen  274 AVMDVDFSPT-GQEFVSGSYDKSIRIFPV  301 (433)
T ss_pred             eEEEeccCCC-cchhccccccceEEEeec
Confidence            9999999996 557899999999999999

>KOG1009|consensus

Probab=99.40  E-value=2.2e-12  Score=106.13  Aligned_cols=104  Identities=13%  Similarity=0.292  Sum_probs=80.4

Q ss_pred             CEEEEecCCcEEEEECCCCC-------eEEE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-------LKWE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH------   64 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-------~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~------   64 (174)
                      .||||+.|..|+||-+..+.       +.+.   ..|...|+.|.|+|++   +.||+|+++|.|-+|-.....      
T Consensus        28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~g---elLASg~D~g~v~lWk~~~~~~~~~d~  104 (434)
T KOG1009|consen   28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDG---ELLASGGDGGEVFLWKQGDVRIFDADT  104 (434)
T ss_pred             ceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCc---CeeeecCCCceEEEEEecCcCCccccc
Confidence            48999999999999886432       2222   2467889999999974   899999999999999876210      


Q ss_pred             cc---c--ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          65 RE---K--GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        65 ~~---~--~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.   +  -.....+.+|.. .|+.++|+| +...+++++.|.++++||+
T Consensus       105 e~~~~ke~w~v~k~lr~h~~-diydL~Ws~-d~~~l~s~s~dns~~l~Dv  152 (434)
T KOG1009|consen  105 EADLNKEKWVVKKVLRGHRD-DIYDLAWSP-DSNFLVSGSVDNSVRLWDV  152 (434)
T ss_pred             hhhhCccceEEEEEeccccc-chhhhhccC-CCceeeeeeccceEEEEEe
Confidence            00   0  111234568888 999999999 5678999999999999999

>KOG2048|consensus

Probab=99.38  E-value=5.8e-12  Score=108.90  Aligned_cols=127  Identities=15%  Similarity=0.315  Sum_probs=95.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc--ceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK--GFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~--~~~~~~~~~   76 (174)
                      ++.|++||.+++.+...+.+.+...   .++.|-+|+|+|++   ..|++|+.||.|++||+..++.++  .+.+-.+..
T Consensus       125 l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~---~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k  201 (691)
T KOG2048|consen  125 LAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTG---TKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSK  201 (691)
T ss_pred             EEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCc---cEEEecccCceEEEEEcCCCceEEEeeeccccccc
Confidence            6789999988888888888776543   24779999999975   789999999999999999876443  111111212


Q ss_pred             -cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415          77 -HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA  155 (174)
Q Consensus        77 -h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~  155 (174)
                       ..- -||+|.|.. + .++|+|..-|+|++||.+                            .         +.|++++
T Consensus       202 ~~~~-iVWSv~~Lr-d-~tI~sgDS~G~V~FWd~~----------------------------~---------gTLiqS~  241 (691)
T KOG2048|consen  202 REPT-IVWSVLFLR-D-STIASGDSAGTVTFWDSI----------------------------F---------GTLIQSH  241 (691)
T ss_pred             CCce-EEEEEEEee-c-CcEEEecCCceEEEEccc----------------------------C---------cchhhhh
Confidence             233 799999996 3 478999999999999991                            2         3477777


Q ss_pred             eccccceeeeeeCCCC
Q psy6415         156 TLSSQPINSLDWSADK  171 (174)
Q Consensus       156 ~~h~~~V~~l~~spd~  171 (174)
                      ..|...|.+|+-++++
T Consensus       242 ~~h~adVl~Lav~~~~  257 (691)
T KOG2048|consen  242 SCHDADVLALAVADNE  257 (691)
T ss_pred             hhhhcceeEEEEcCCC
Confidence            7888888888777764

>KOG1036|consensus

Probab=99.38  E-value=4.7e-12  Score=101.03  Aligned_cols=96  Identities=15%  Similarity=0.269  Sum_probs=83.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |+.+++||++++||..+..+...+.+..++.+.+|.++    ..+++|+.||.||++|+.+.+..      .+-.|.. +
T Consensus        28 LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~----~~~~~G~~dg~vr~~Dln~~~~~------~igth~~-~   96 (323)
T KOG1036|consen   28 LLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADE----STIVTGGLDGQVRRYDLNTGNED------QIGTHDE-G   96 (323)
T ss_pred             EEEEeccCcEEEEeccchhhhhheecCCceeeeeccCC----ceEEEeccCceEEEEEecCCcce------eeccCCC-c
Confidence            67788999999999999888777888899999999974    78999999999999999986521      2347888 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.+|.++| ....++|||.|++|++||.
T Consensus        97 i~ci~~~~-~~~~vIsgsWD~~ik~wD~  123 (323)
T KOG1036|consen   97 IRCIEYSY-EVGCVISGSWDKTIKFWDP  123 (323)
T ss_pred             eEEEEeec-cCCeEEEcccCccEEEEec
Confidence            99999999 4567899999999999999

>KOG0321|consensus

Probab=99.38  E-value=1.4e-12  Score=112.20  Aligned_cols=107  Identities=13%  Similarity=0.231  Sum_probs=80.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE---EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc-------c----
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW---ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR-------E----   66 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~---~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~-------~----   66 (174)
                      +|++++.|.++++||+++..+.-   .+.|...|.+++|.|.+  ...+++|+.||.|.|||+|-...       .    
T Consensus       114 ~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n--~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~  191 (720)
T KOG0321|consen  114 LLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTN--PAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYG  191 (720)
T ss_pred             eEEEccCCceeeeeeeccceeecceeecccccccchhhhccCC--CcceeeccCCCcEEEEEEeccchhhHHHHhhhhhc
Confidence            48999999999999999988754   35678889999999975  57899999999999999985420       0    


Q ss_pred             -c-c---------eeeeeecccCcCcEEE---EEEcCCCCCEEEEEcC-CCcEEEEeccc
Q psy6415          67 -K-G---------FAYLSEKAHKATTVWA---AKHLPQNRDLFVTCGG-SGSLNLWQLVS  111 (174)
Q Consensus        67 -~-~---------~~~~~~~~h~~~~i~~---v~fsP~~~~~las~s~-Dg~V~lWd~~~  111 (174)
                       + +         ..+....+|.. .|.+   +-+.- |..+|||||. |+.||+||+..
T Consensus       192 ~~n~~ptpskp~~kr~~k~kA~s~-ti~ssvTvv~fk-De~tlaSaga~D~~iKVWDLRk  249 (720)
T KOG0321|consen  192 RHNTAPTPSKPLKKRIRKWKAASN-TIFSSVTVVLFK-DESTLASAGAADSTIKVWDLRK  249 (720)
T ss_pred             cccCCCCCCchhhccccccccccC-ceeeeeEEEEEe-ccceeeeccCCCcceEEEeecc
Confidence             0 0         01112335555 5655   55555 5678999999 99999999943

>KOG4378|consensus

Probab=99.38  E-value=4.5e-12  Score=106.82  Aligned_cols=124  Identities=11%  Similarity=0.228  Sum_probs=98.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|.+++++|.|.|||+++....+.  ..|..+...|+|+|..  .-.|++.+.|..|.+||++.......     + ...
T Consensus       179 lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsn--e~l~vsVG~Dkki~~yD~~s~~s~~~-----l-~y~  250 (673)
T KOG4378|consen  179 LLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSN--EALLVSVGYDKKINIYDIRSQASTDR-----L-TYS  250 (673)
T ss_pred             eeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCc--cceEEEecccceEEEeecccccccce-----e-eec
Confidence            478999999999999988776654  3477788889999963  46789999999999999997543322     1 223


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      . +..+|+|+| ++.+|++|...|.|..||+    |..                                -..+..+..|
T Consensus       251 ~-Plstvaf~~-~G~~L~aG~s~G~~i~YD~----R~~--------------------------------k~Pv~v~sah  292 (673)
T KOG4378|consen  251 H-PLSTVAFSE-CGTYLCAGNSKGELIAYDM----RST--------------------------------KAPVAVRSAH  292 (673)
T ss_pred             C-CcceeeecC-CceEEEeecCCceEEEEec----ccC--------------------------------CCCceEeeec
Confidence            4 789999999 6789999999999999999    211                                1246777889


Q ss_pred             ccceeeeeeCCC
Q psy6415         159 SQPINSLDWSAD  170 (174)
Q Consensus       159 ~~~V~~l~~spd  170 (174)
                      ...|.+|+|=|.
T Consensus       293 ~~sVt~vafq~s  304 (673)
T KOG4378|consen  293 DASVTRVAFQPS  304 (673)
T ss_pred             ccceeEEEeeec
Confidence            999999999764

>KOG0646|consensus

Probab=99.38  E-value=6.9e-12  Score=104.56  Aligned_cols=104  Identities=14%  Similarity=0.231  Sum_probs=81.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc---ccc-cceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL---HRE-KGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~---~~~-~~~~~~~~~~   76 (174)
                      |+.|..-|.|.+|-+.+|.++... .|-..|+++.|+.++   ..|+|||.||.|.+|++-..   ... ...+.+.+..
T Consensus        96 l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dg---s~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~  172 (476)
T KOG0646|consen   96 LLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDG---SHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSD  172 (476)
T ss_pred             EEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCC---cEEEecCCCccEEEEEEEeecccccCCCccceeeecc
Confidence            556668999999999999986543 466889999999874   89999999999999997542   111 1223456678


Q ss_pred             cCcCcEEEEEEcCC-CCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQ-NRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~-~~~~las~s~Dg~V~lWd~  109 (174)
                      |.- +|.++...+- -...++|+|.|.+||+||+
T Consensus       173 Htl-sITDl~ig~Gg~~~rl~TaS~D~t~k~wdl  205 (476)
T KOG0646|consen  173 HTL-SITDLQIGSGGTNARLYTASEDRTIKLWDL  205 (476)
T ss_pred             Ccc-eeEEEEecCCCccceEEEecCCceEEEEEe
Confidence            888 9999877762 1347899999999999999

>KOG2445|consensus

Probab=99.37  E-value=1.8e-11  Score=98.06  Aligned_cols=106  Identities=10%  Similarity=0.205  Sum_probs=76.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-----eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc-ccc---eeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-----TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR-EKG---FAYL   72 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-----~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~-~~~---~~~~   72 (174)
                      +|||+.|++|||||.+...-.+.     ..|.+.|..|.|-+.. =|+.+|++|.|++++||.=..... .++   ....
T Consensus        28 mAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPE-fGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~t  106 (361)
T KOG2445|consen   28 MATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPE-FGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRT  106 (361)
T ss_pred             eeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCcc-ccceEEEEecCCceeeeeecccccccccceeEEEE
Confidence            68999999999999765443222     3467889999986532 368899999999999998532211 111   1122


Q ss_pred             eecccCcCcEEEEEEcCCC-CCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~  109 (174)
                      ++..-.. .|.+|.|.|.. +-.+|+++.||+||||+.
T Consensus       107 tl~Dsrs-sV~DV~FaP~hlGLklA~~~aDG~lRIYEA  143 (361)
T KOG2445|consen  107 TLVDSRS-SVTDVKFAPKHLGLKLAAASADGILRIYEA  143 (361)
T ss_pred             EeecCCc-ceeEEEecchhcceEEEEeccCcEEEEEec
Confidence            3444455 89999999963 347999999999999998

>KOG0639|consensus

Probab=99.36  E-value=3.2e-12  Score=107.87  Aligned_cols=127  Identities=18%  Similarity=0.264  Sum_probs=91.9

Q ss_pred             EEEEecCCcEEEEECCCCCe---EEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           2 VVAGYDNGDLKMFDLKTMSL---KWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~---~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      +.||+. |.|||||+....-   +..+   +-.+-|++.-..|++   +.|++|++-.++.|||+...++.-..   .+.
T Consensus       434 VyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdg---rtLivGGeastlsiWDLAapTprika---elt  506 (705)
T KOG0639|consen  434 VYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDG---RTLIVGGEASTLSIWDLAAPTPRIKA---ELT  506 (705)
T ss_pred             eEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCC---ceEEeccccceeeeeeccCCCcchhh---hcC
Confidence            456665 8999999975421   1111   123447888888874   89999999999999999986543111   111


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA  155 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~  155 (174)
                      .-.. ..+.++.||+ .++..+|..||.|.|||+     .                       +         ..++..|
T Consensus       507 ssap-aCyALa~spD-akvcFsccsdGnI~vwDL-----h-----------------------n---------q~~Vrqf  547 (705)
T KOG0639|consen  507 SSAP-ACYALAISPD-AKVCFSCCSDGNIAVWDL-----H-----------------------N---------QTLVRQF  547 (705)
T ss_pred             Ccch-hhhhhhcCCc-cceeeeeccCCcEEEEEc-----c-----------------------c---------ceeeecc
Confidence            1112 5788999994 567778899999999999     0                       1         1378999


Q ss_pred             eccccceeeeeeCCCCCCC
Q psy6415         156 TLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       156 ~~h~~~V~~l~~spd~~~~  174 (174)
                      .||+..+.+|+.|+||--|
T Consensus       548 qGhtDGascIdis~dGtkl  566 (705)
T KOG0639|consen  548 QGHTDGASCIDISKDGTKL  566 (705)
T ss_pred             cCCCCCceeEEecCCCcee
Confidence            9999999999999998543

>KOG1274|consensus

Probab=99.35  E-value=1.4e-11  Score=109.61  Aligned_cols=104  Identities=15%  Similarity=0.197  Sum_probs=80.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee--eeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY--LSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~--~~~~~h   77 (174)
                      ++|.||+|-.||+-++.....+.. ..|...|.+|.|+|.+   +.||+.+-||+|+|||+.++.+.+.+..  .....-
T Consensus       110 ~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~---~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~  186 (933)
T KOG1274|consen  110 MIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKG---NFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFI  186 (933)
T ss_pred             EEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCC---CEEEEEecCceEEEEEcccchhhhhcccCCcccccc
Confidence            589999999999999977655444 5688999999999974   8999999999999999998764332210  001111


Q ss_pred             -CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          78 -KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 -~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .. .+..++|+|+++ .||..+.|+.|++|+.
T Consensus       187 ~s~-i~~~~aW~Pk~g-~la~~~~d~~Vkvy~r  217 (933)
T KOG1274|consen  187 LSR-ICTRLAWHPKGG-TLAVPPVDNTVKVYSR  217 (933)
T ss_pred             ccc-eeeeeeecCCCC-eEEeeccCCeEEEEcc
Confidence             23 567899999766 5677888999999998

>KOG2096|consensus

Probab=99.34  E-value=8.8e-12  Score=100.37  Aligned_cols=92  Identities=13%  Similarity=0.237  Sum_probs=68.4

Q ss_pred             CEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccccccee
Q psy6415          44 NKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIF  123 (174)
Q Consensus        44 ~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~  123 (174)
                      .+|+++|.|.+|-|||++.+ .     +.++..-+. .-+..+.|| ++..+|+++.--.|++|..              
T Consensus       200 k~imsas~dt~i~lw~lkGq-~-----L~~idtnq~-~n~~aavSP-~GRFia~~gFTpDVkVwE~--------------  257 (420)
T KOG2096|consen  200 KYIMSASLDTKICLWDLKGQ-L-----LQSIDTNQS-SNYDAAVSP-DGRFIAVSGFTPDVKVWEP--------------  257 (420)
T ss_pred             eEEEEecCCCcEEEEecCCc-e-----eeeeccccc-cccceeeCC-CCcEEEEecCCCCceEEEE--------------
Confidence            47899999999999999953 2     223333333 456778999 5678999999999999998              


Q ss_pred             eeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         124 RYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       124 ~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                          -|       ..||..    .....++.|.||+..|..++|||+..
T Consensus       258 ----~f-------~kdG~f----qev~rvf~LkGH~saV~~~aFsn~S~  291 (420)
T KOG2096|consen  258 ----IF-------TKDGTF----QEVKRVFSLKGHQSAVLAAAFSNSST  291 (420)
T ss_pred             ----Ee-------ccCcch----hhhhhhheeccchhheeeeeeCCCcc
Confidence                22       125532    22356899999999999999999864

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.33  E-value=3.1e-11  Score=95.65  Aligned_cols=97  Identities=19%  Similarity=0.258  Sum_probs=66.8

Q ss_pred             EEEecCCcEEEEECCCCCeEEEeecC------C--CEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeee
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWETNLK------N--GVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~~~~------~--~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +++..|+.|++||++++++.......      .  ....++|+|++   +.+ ++.+.++.|.+||+++.+...     .
T Consensus       173 ~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg---~~~~~~~~~~~~i~v~d~~~~~~~~-----~  244 (300)
T TIGR03866       173 VSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDG---KTAFVALGPANRVAVVDAKTYEVLD-----Y  244 (300)
T ss_pred             EEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCC---CEEEEEcCCCCeEEEEECCCCcEEE-----E
Confidence            45566999999999998765433211      1  23468899974   554 445667789999998765321     1


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      + .+.. .+++++|+|++..++++++.+|+|++||+
T Consensus       245 ~-~~~~-~~~~~~~~~~g~~l~~~~~~~~~i~v~d~  278 (300)
T TIGR03866       245 L-LVGQ-RVWQLAFTPDEKYLLTTNGVSNDVSVIDV  278 (300)
T ss_pred             E-EeCC-CcceEEECCCCCEEEEEcCCCCeEEEEEC
Confidence            1 2334 78999999965544444567999999999

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG4328|consensus

Probab=99.33  E-value=6.9e-12  Score=104.51  Aligned_cols=103  Identities=18%  Similarity=0.267  Sum_probs=79.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +..|..=|...+||+|++.....  .-|...|++|++||-.  ...|||||.|+++||||+|....-..-.+.+ ..|..
T Consensus       294 vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~--p~~laT~s~D~T~kIWD~R~l~~K~sp~lst-~~Hrr  370 (498)
T KOG4328|consen  294 VLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVC--PWFLATASLDQTAKIWDLRQLRGKASPFLST-LPHRR  370 (498)
T ss_pred             EEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCC--chheeecccCcceeeeehhhhcCCCCcceec-ccccc
Confidence            34455556889999998765322  2356689999999963  5789999999999999999754322101223 47888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .|+++-|||.++. |+|.+.|.+|+|||.
T Consensus       371 -sV~sAyFSPs~gt-l~TT~~D~~IRv~ds  398 (498)
T KOG4328|consen  371 -SVNSAYFSPSGGT-LLTTCQDNEIRVFDS  398 (498)
T ss_pred             -eeeeeEEcCCCCc-eEeeccCCceEEeec
Confidence             9999999998776 899999999999998

>KOG1188|consensus

Probab=99.32  E-value=1.6e-11  Score=99.25  Aligned_cols=132  Identities=17%  Similarity=0.264  Sum_probs=95.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|++...|+|+|||..+++....+ .++..++.|.|...+ .++.+.+|+.||+||+||+|......   .....+|+++
T Consensus        43 vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d-s~h~v~s~ssDG~Vr~wD~Rs~~e~a---~~~~~~~~~~  118 (376)
T KOG1188|consen   43 VAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD-SPHGVISCSSDGTVRLWDIRSQAESA---RISWTQQSGT  118 (376)
T ss_pred             EEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCC-CCCeeEEeccCCeEEEEEeecchhhh---heeccCCCCC
Confidence            788999999999999998766554 355667788887643 36789999999999999999864322   2233466643


Q ss_pred             cEEEEEEcCCCCCEEEEEc----CCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccc-eeeee
Q psy6415          81 TVWAAKHLPQNRDLFVTCG----GSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT-LLQEA  155 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s----~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~-ll~~~  155 (174)
                      +..+++.+- ...++|+|.    .|-.|.+||+    |..                      +          + +-.-.
T Consensus       119 ~f~~ld~nc-k~~ii~~GtE~~~s~A~v~lwDv----R~~----------------------q----------q~l~~~~  161 (376)
T KOG1188|consen  119 PFICLDLNC-KKNIIACGTELTRSDASVVLWDV----RSE----------------------Q----------QLLRQLN  161 (376)
T ss_pred             cceEeeccC-cCCeEEeccccccCceEEEEEEe----ccc----------------------c----------chhhhhh
Confidence            777888776 456888774    3678999999    211                      0          1 22334


Q ss_pred             eccccceeeeeeCCCCCCC
Q psy6415         156 TLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       156 ~~h~~~V~~l~~spd~~~~  174 (174)
                      +.|...|+.|.|+|..+.|
T Consensus       162 eSH~DDVT~lrFHP~~pnl  180 (376)
T KOG1188|consen  162 ESHNDDVTQLRFHPSDPNL  180 (376)
T ss_pred             hhccCcceeEEecCCCCCe
Confidence            6789999999999987643

>KOG0771|consensus

Probab=99.32  E-value=2.1e-11  Score=100.55  Aligned_cols=60  Identities=18%  Similarity=0.231  Sum_probs=50.5

Q ss_pred             CEEEEecCCcEEEEECCCCCe-EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH   64 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~   64 (174)
                      .||+|+.||++|+|++.+... .....|+..|.+++|+|++   ..|++-+.| ..+|||+++..
T Consensus       158 ~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dg---k~lasig~d-~~~VW~~~~g~  218 (398)
T KOG0771|consen  158 KLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDG---KFLASIGAD-SARVWSVNTGA  218 (398)
T ss_pred             EeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCC---cEEEEecCC-ceEEEEeccCc
Confidence            479999999999999665544 3445688999999999974   899999999 99999999874

>KOG2106|consensus

Probab=99.31  E-value=6.3e-11  Score=100.06  Aligned_cols=125  Identities=14%  Similarity=0.302  Sum_probs=98.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++|++.|+.++||+  ..++++.......+.+++|+|.    +.+|.|+..|.--+.|.++...+   .++   ..+. 
T Consensus       382 q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhps----g~va~Gt~~G~w~V~d~e~~~lv---~~~---~d~~-  448 (626)
T KOG2106|consen  382 QLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPS----GVVAVGTATGRWFVLDTETQDLV---TIH---TDNE-  448 (626)
T ss_pred             heeeccCcceEEEcc--CCceeEEEEecCceeEeeccCc----ceEEEeeccceEEEEecccceeE---EEE---ecCC-
Confidence            478999999999999  5677777777888999999996    48999999999999999885422   222   2356 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      ++..|+|+| ++.+||.|+.|+.|+||.+.                           .+|.      ....+....|  +
T Consensus       449 ~ls~v~ysp-~G~~lAvgs~d~~iyiy~Vs---------------------------~~g~------~y~r~~k~~g--s  492 (626)
T KOG2106|consen  449 QLSVVRYSP-DGAFLAVGSHDNHIYIYRVS---------------------------ANGR------KYSRVGKCSG--S  492 (626)
T ss_pred             ceEEEEEcC-CCCEEEEecCCCeEEEEEEC---------------------------CCCc------EEEEeeeecC--c
Confidence            899999999 57799999999999999991                           1221      1123445555  9


Q ss_pred             ceeeeeeCCCCCCC
Q psy6415         161 PINSLDWSADKLGL  174 (174)
Q Consensus       161 ~V~~l~~spd~~~~  174 (174)
                      ||.-|+||+|++.|
T Consensus       493 ~ithLDwS~Ds~~~  506 (626)
T KOG2106|consen  493 PITHLDWSSDSQFL  506 (626)
T ss_pred             eeEEeeecCCCceE
Confidence            99999999998753

>KOG2445|consensus

Probab=99.31  E-value=3.1e-11  Score=96.66  Aligned_cols=116  Identities=15%  Similarity=0.267  Sum_probs=86.0

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE-cCCCCCEEEEEcCCCcE
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH-LPQNRDLFVTCGGSGSL  104 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f-sP~~~~~las~s~Dg~V  104 (174)
                      .|.+-|++|.|++.|   ..+||||.|.+|+|||.+.....=. .....++|.+ .||.|.| ||.=++++|+||.|++|
T Consensus        11 ~h~DlihdVs~D~~G---RRmAtCSsDq~vkI~d~~~~s~~W~-~Ts~Wrah~~-Si~rV~WAhPEfGqvvA~cS~Drtv   85 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYG---RRMATCSSDQTVKIWDSTSDSGTWS-CTSSWRAHDG-SIWRVVWAHPEFGQVVATCSYDRTV   85 (361)
T ss_pred             CCcceeeeeeecccC---ceeeeccCCCcEEEEeccCCCCceE-EeeeEEecCC-cEEEEEecCccccceEEEEecCCce
Confidence            355669999999974   9999999999999999865432100 1235678999 9999998 56567899999999999


Q ss_pred             EEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         105 NLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       105 ~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      +||.-.   +                     .++++.    ..+-.+..++...+..|.++.|.|-..||
T Consensus        86 ~iWEE~---~---------------------~~~~~~----~~~Wv~~ttl~DsrssV~DV~FaP~hlGL  127 (361)
T KOG2445|consen   86 SIWEEQ---E---------------------KSEEAH----GRRWVRRTTLVDSRSSVTDVKFAPKHLGL  127 (361)
T ss_pred             eeeeec---c---------------------cccccc----cceeEEEEEeecCCcceeEEEecchhcce
Confidence            999761   0                     000110    01224577788889999999999988876

>KOG1408|consensus

Probab=99.30  E-value=8e-12  Score=109.12  Aligned_cols=126  Identities=16%  Similarity=0.283  Sum_probs=98.3

Q ss_pred             CEEEEecCCcEEEEECCCCC---e-------------EEE----------------------eecCCCEEEEEecCCCCC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS---L-------------KWE----------------------TNLKNGVCGVDFDRRDIP   42 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~---~-------------~~~----------------------~~~~~~V~sv~f~~~~~~   42 (174)
                      +++|++.|++|++||+....   .             .+.                      .....++.+|+.+|++  
T Consensus       394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~g--  471 (1080)
T KOG1408|consen  394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDG--  471 (1080)
T ss_pred             ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCc--
Confidence            36899999999999997521   1             000                      0113468999999974  


Q ss_pred             CCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCC--CCCEEEEEcCCCcEEEEecccccccccccc
Q psy6415          43 MNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQ--NRDLFVTCGGSGSLNLWQLVSALRADTNLC  120 (174)
Q Consensus        43 ~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~--~~~~las~s~Dg~V~lWd~~~~~~~~~~~~  120 (174)
                       +.||+|..-|++||+|+.+.+..     -.+++|.. +|.++.||-.  ...+||+||.|.-|.++|+     .     
T Consensus       472 -qhLAsGDr~GnlrVy~Lq~l~~~-----~~~eAHes-EilcLeyS~p~~~~kLLASasrdRlIHV~Dv-----~-----  534 (1080)
T KOG1408|consen  472 -QHLASGDRGGNLRVYDLQELEYT-----CFMEAHES-EILCLEYSFPVLTNKLLASASRDRLIHVYDV-----K-----  534 (1080)
T ss_pred             -ceecccCccCceEEEEehhhhhh-----hheecccc-eeEEEeecCchhhhHhhhhccCCceEEEEec-----c-----
Confidence             99999999999999999886532     23469999 9999999842  2358999999999999999     0     


Q ss_pred             ceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCC
Q psy6415         121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                            .+                    ..|++++.+|+..|.++.|--.|
T Consensus       535 ------rn--------------------y~l~qtld~HSssITsvKFa~~g  559 (1080)
T KOG1408|consen  535 ------RN--------------------YDLVQTLDGHSSSITSVKFACNG  559 (1080)
T ss_pred             ------cc--------------------cchhhhhcccccceeEEEEeecC
Confidence                  11                    24789999999999999998765

>KOG1524|consensus

Probab=99.30  E-value=8.7e-12  Score=105.96  Aligned_cols=96  Identities=10%  Similarity=0.192  Sum_probs=68.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |+|+++||.||+|.. +|-+... ......|++++|.|+.  .+.+.+.+  +.+.|=-+..+     ..+..+++|.+ 
T Consensus       119 Llt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S--~~vl~c~g--~h~~IKpL~~n-----~k~i~WkAHDG-  187 (737)
T KOG1524|consen  119 LLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNS--NSIVFCQG--GHISIKPLAAN-----SKIIRWRAHDG-  187 (737)
T ss_pred             eeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCC--CceEEecC--CeEEEeecccc-----cceeEEeccCc-
Confidence            678999999999975 4433222 2235679999999975  23444443  34444333332     13456789999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -|.++.|+|. .++++|||+|-..|+||-
T Consensus       188 iiL~~~W~~~-s~lI~sgGED~kfKvWD~  215 (737)
T KOG1524|consen  188 LVLSLSWSTQ-SNIIASGGEDFRFKIWDA  215 (737)
T ss_pred             EEEEeecCcc-ccceeecCCceeEEeecc
Confidence            9999999995 579999999999999998

>KOG1009|consensus

Probab=99.30  E-value=3.3e-11  Score=99.24  Aligned_cols=122  Identities=20%  Similarity=0.284  Sum_probs=88.6

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc----eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG----FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG  102 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~----~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg  102 (174)
                      .+..|.++.|.++.  .+.|+||+.|..||||-+....+-.+    ..+..+..|.. +|+.|+|+| ++.+||||+.+|
T Consensus        12 ~~~pv~s~dfq~n~--~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~-aVN~vRf~p-~gelLASg~D~g   87 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNS--LNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTR-AVNVVRFSP-DGELLASGGDGG   87 (434)
T ss_pred             CCCceEEEEeccCc--ccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcc-eeEEEEEcC-CcCeeeecCCCc
Confidence            46789999999875  46899999999999999987554321    12345678888 999999999 567999999999


Q ss_pred             cEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc-ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         103 SLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV-PGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       103 ~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~-~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      .|-||....     .                ...+.|. .... .+.-.....+.+|...|.+++|+||+.-|
T Consensus        88 ~v~lWk~~~-----~----------------~~~~~d~-e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l  138 (434)
T KOG1009|consen   88 EVFLWKQGD-----V----------------RIFDADT-EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFL  138 (434)
T ss_pred             eEEEEEecC-----c----------------CCccccc-hhhhCccceEEEEEecccccchhhhhccCCCcee
Confidence            999999821     0                0000111 0000 11124567788999999999999998643

>KOG2055|consensus

Probab=99.29  E-value=1.8e-11  Score=102.26  Aligned_cols=132  Identities=18%  Similarity=0.231  Sum_probs=101.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +||..+..|.|.|--..|++.+..+...+.|..+.|+.++   ..|++++.+|.|.+||++...+++.+..      .+ 
T Consensus       317 fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSds---k~l~~~~~~GeV~v~nl~~~~~~~rf~D------~G-  386 (514)
T KOG2055|consen  317 FIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDS---KELLASGGTGEVYVWNLRQNSCLHRFVD------DG-  386 (514)
T ss_pred             eEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCC---cEEEEEcCCceEEEEecCCcceEEEEee------cC-
Confidence            4788889999999998999888777777889999999763   8899999999999999999887665531      22 


Q ss_pred             cE--EEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          81 TV--WAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        81 ~i--~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      .|  .+++.++ ++.+||+||..|.|+|||.++.+..                        +.       -+.+.++-.=
T Consensus       387 ~v~gts~~~S~-ng~ylA~GS~~GiVNIYd~~s~~~s------------------------~~-------PkPik~~dNL  434 (514)
T KOG2055|consen  387 SVHGTSLCISL-NGSYLATGSDSGIVNIYDGNSCFAS------------------------TN-------PKPIKTVDNL  434 (514)
T ss_pred             ccceeeeeecC-CCceEEeccCcceEEEeccchhhcc------------------------CC-------CCchhhhhhh
Confidence            33  3566777 5679999999999999998332221                        10       1245555555


Q ss_pred             ccceeeeeeCCCCCCC
Q psy6415         159 SQPINSLDWSADKLGL  174 (174)
Q Consensus       159 ~~~V~~l~~spd~~~~  174 (174)
                      ...|.+|.||||.+-|
T Consensus       435 tt~Itsl~Fn~d~qiL  450 (514)
T KOG2055|consen  435 TTAITSLQFNHDAQIL  450 (514)
T ss_pred             heeeeeeeeCcchhhh
Confidence            7899999999998754

>KOG0321|consensus

Probab=99.29  E-value=9.1e-12  Score=107.31  Aligned_cols=102  Identities=22%  Similarity=0.390  Sum_probs=85.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeE-------EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK-------WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~-------~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +||.+.+||.|.|+|.+.....       .-..|.+.|..+.|-|-   ...|++++.|.+||+||+.+..+...   ..
T Consensus        66 iLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapg---e~~lVsasGDsT~r~Wdvk~s~l~G~---~~  139 (720)
T KOG0321|consen   66 ILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPG---ESLLVSASGDSTIRPWDVKTSRLVGG---RL  139 (720)
T ss_pred             eEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCC---ceeEEEccCCceeeeeeeccceeecc---ee
Confidence            4788999999999999765432       12357789999999993   36799999999999999998765432   12


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+|.. .|.+++|+|+++.+|+||+.||.|.|||+
T Consensus       140 ~~GH~~-SvkS~cf~~~n~~vF~tGgRDg~illWD~  174 (720)
T KOG0321|consen  140 NLGHTG-SVKSECFMPTNPAVFCTGGRDGEILLWDC  174 (720)
T ss_pred             eccccc-ccchhhhccCCCcceeeccCCCcEEEEEE
Confidence            459999 99999999999999999999999999999

>KOG0641|consensus

Probab=99.27  E-value=7.7e-11  Score=91.35  Aligned_cols=103  Identities=16%  Similarity=0.283  Sum_probs=85.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|-.|....+||+|.+..++.+ .|...|.+|.|+|..   .+++++|.|..||+=|++.. ..+++.+.....|++
T Consensus       245 ll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a---~yllt~syd~~ikltdlqgd-la~el~~~vv~ehkd  320 (350)
T KOG0641|consen  245 LLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGA---HYLLTCSYDMKIKLTDLQGD-LAHELPIMVVAEHKD  320 (350)
T ss_pred             eeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCc---eEEEEecccceEEEeecccc-hhhcCceEEEEeccC
Confidence            5899999999999999999988765 467889999999963   89999999999999999853 223333334457888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .+-.++|+|++ --|++.+.|.++.||-+
T Consensus       321 -k~i~~rwh~~d-~sfisssadkt~tlwa~  348 (350)
T KOG0641|consen  321 -KAIQCRWHPQD-FSFISSSADKTATLWAL  348 (350)
T ss_pred             -ceEEEEecCcc-ceeeeccCcceEEEecc
Confidence             88899999964 57899999999999987

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.25  E-value=1.6e-10  Score=88.59  Aligned_cols=94  Identities=13%  Similarity=0.247  Sum_probs=69.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +++|..++.|.|||++ ++.+..+. ...++.|.|+|++   +.||+|+.+   |.|.+||+++.+.+.     +. .|.
T Consensus        76 vi~g~~~~~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G---~~l~~~g~~n~~G~l~~wd~~~~~~i~-----~~-~~~  144 (194)
T PF08662_consen   76 VIYGSMPAKVTLYDVK-GKKIFSFG-TQPRNTISWSPDG---RFLVLAGFGNLNGDLEFWDVRKKKKIS-----TF-EHS  144 (194)
T ss_pred             EEEccCCcccEEEcCc-ccEeEeec-CCCceEEEECCCC---CEEEEEEccCCCcEEEEEECCCCEEee-----cc-ccC
Confidence            4567778899999997 44444432 4678899999975   899888644   669999999765432     21 343


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcC------CCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGG------SGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~------Dg~V~lWd~  109 (174)
                        .+..++|+|+ +..|+|+..      |..++||++
T Consensus       145 --~~t~~~WsPd-Gr~~~ta~t~~r~~~dng~~Iw~~  178 (194)
T PF08662_consen  145 --DATDVEWSPD-GRYLATATTSPRLRVDNGFKIWSF  178 (194)
T ss_pred             --cEEEEEEcCC-CCEEEEEEeccceeccccEEEEEe
Confidence              4789999995 567777764      889999999

>KOG2110|consensus

Probab=99.25  E-value=2.3e-10  Score=93.46  Aligned_cols=119  Identities=23%  Similarity=0.327  Sum_probs=87.8

Q ss_pred             CcEEEEECCCCCeEEEee----cCCCEEEEEecCCCCCCCEEEE--EeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           9 GDLKMFDLKTMSLKWETN----LKNGVCGVDFDRRDIPMNKLVA--TTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~----~~~~V~sv~f~~~~~~~~~l~s--~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      ..|.|+|++..+++.+..    +..+++++++|..   ..+||.  ...-|.|.|||+.+..+     ..++.+|.+ ++
T Consensus       106 e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~---n~ylAyp~s~t~GdV~l~d~~nl~~-----v~~I~aH~~-~l  176 (391)
T KOG2110|consen  106 ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNA---NCYLAYPGSTTSGDVVLFDTINLQP-----VNTINAHKG-PL  176 (391)
T ss_pred             ccEEEEecccceeehhhhccCCCccceEeeccCCC---CceEEecCCCCCceEEEEEccccee-----eeEEEecCC-ce
Confidence            559999999988876532    3466887777764   257775  33578999999988653     345679999 99


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcE-EEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc--
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSL-NLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS--  159 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V-~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~--  159 (174)
                      -+++||| ++.+|||||..|+| |++.+                            ++|         +++++|.-..  
T Consensus       177 Aalafs~-~G~llATASeKGTVIRVf~v----------------------------~~G---------~kl~eFRRG~~~  218 (391)
T KOG2110|consen  177 AALAFSP-DGTLLATASEKGTVIRVFSV----------------------------PEG---------QKLYEFRRGTYP  218 (391)
T ss_pred             eEEEECC-CCCEEEEeccCceEEEEEEc----------------------------CCc---------cEeeeeeCCcee
Confidence            9999999 67899999999974 78888                            133         3455554433  


Q ss_pred             cceeeeeeCCCCCCC
Q psy6415         160 QPINSLDWSADKLGL  174 (174)
Q Consensus       160 ~~V~~l~~spd~~~~  174 (174)
                      -.|.+|+||||++-|
T Consensus       219 ~~IySL~Fs~ds~~L  233 (391)
T KOG2110|consen  219 VSIYSLSFSPDSQFL  233 (391)
T ss_pred             eEEEEEEECCCCCeE
Confidence            347888999988754

>KOG0642|consensus

Probab=99.25  E-value=3.6e-11  Score=102.30  Aligned_cols=104  Identities=14%  Similarity=0.332  Sum_probs=80.4

Q ss_pred             CEEEEecCCcEEEEECCCC--------CeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-cccc--
Q psy6415           1 MVVAGYDNGDLKMFDLKTM--------SLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REKG--   68 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~--------~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~--   68 (174)
                      .|++|+.||+|++|+++..        +.+++ .+|...|-+|+..+++   ..+.+|+-||+|+.|++.... +-..  
T Consensus       308 ~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~---~~~ysgg~Dg~I~~w~~p~n~dp~ds~d  384 (577)
T KOG0642|consen  308 VLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNG---EHCYSGGIDGTIRCWNLPPNQDPDDSYD  384 (577)
T ss_pred             eEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCc---eEEEeeccCceeeeeccCCCCCcccccC
Confidence            3799999999999999321        12233 3578899999999864   899999999999999776211 0001  


Q ss_pred             --eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          69 --FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        69 --~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                        ....++.+|.+ .||.+++|+ ....|++|+.||+|++|+.
T Consensus       385 p~vl~~~l~Ghtd-avw~l~~s~-~~~~Llscs~DgTvr~w~~  425 (577)
T KOG0642|consen  385 PSVLSGTLLGHTD-AVWLLALSS-TKDRLLSCSSDGTVRLWEP  425 (577)
T ss_pred             cchhccceecccc-ceeeeeecc-cccceeeecCCceEEeecc
Confidence              12335679999 999999999 5667899999999999998

>KOG0299|consensus

Probab=99.22  E-value=5.3e-11  Score=99.23  Aligned_cols=98  Identities=14%  Similarity=0.216  Sum_probs=80.8

Q ss_pred             EEEEecCCcEEEEECCCCCeE----EE---------------eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLK----WE---------------TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~----~~---------------~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      +.+++.||+|.=|++-++...    ..               ..|...+.+++.++++   .+||+|+.|..|.|||.++
T Consensus       157 ~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg---kylatgg~d~~v~Iw~~~t  233 (479)
T KOG0299|consen  157 VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG---KYLATGGRDRHVQIWDCDT  233 (479)
T ss_pred             eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC---cEEEecCCCceEEEecCcc
Confidence            578999999999999887622    01               1234568899999974   9999999999999999999


Q ss_pred             cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++     .+.+|.+ .|.+++|-. +..-+.++|.|++|++|++
T Consensus       234 ~ehv~-----~~~ghr~-~V~~L~fr~-gt~~lys~s~Drsvkvw~~  273 (479)
T KOG0299|consen  234 LEHVK-----VFKGHRG-AVSSLAFRK-GTSELYSASADRSVKVWSI  273 (479)
T ss_pred             cchhh-----ccccccc-ceeeeeeec-CccceeeeecCCceEEEeh
Confidence            87654     3569999 999999987 5566788999999999999

>KOG2106|consensus

Probab=99.21  E-value=4.1e-10  Score=95.25  Aligned_cols=154  Identities=18%  Similarity=0.318  Sum_probs=103.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc---------------
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR---------------   65 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~---------------   65 (174)
                      ++||..+|.|.||+.++.+.... ..|..+|.++..-++    ..|++|+.|..|..||-.-.+.               
T Consensus       260 viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~----GtllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv  335 (626)
T KOG2106|consen  260 VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRD----GTLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTV  335 (626)
T ss_pred             EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecC----ccEeecCccceEEeccccccccccccCchhcCCeeEE
Confidence            68999999999999988776543 468899999988876    4688899999999999221100               


Q ss_pred             ---------------------ccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceee
Q psy6415          66 ---------------------EKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFR  124 (174)
Q Consensus        66 ---------------------~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~  124 (174)
                                           ...|.+ +-.+|.. +.|.++.+|+ ...|+||+.|+.|+||+- .++...        
T Consensus       336 ~e~~~di~vGTtrN~iL~Gt~~~~f~~-~v~gh~d-elwgla~hps-~~q~~T~gqdk~v~lW~~-~k~~wt--------  403 (626)
T KOG2106|consen  336 AEGKGDILVGTTRNFILQGTLENGFTL-TVQGHGD-ELWGLATHPS-KNQLLTCGQDKHVRLWND-HKLEWT--------  403 (626)
T ss_pred             ecCCCcEEEeeccceEEEeeecCCceE-EEEeccc-ceeeEEcCCC-hhheeeccCcceEEEccC-CceeEE--------
Confidence                                 000111 1236888 9999999995 568899999999999993 222211        


Q ss_pred             eecCCCCCCcccCCCCCcccc-----------ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         125 YSSNYPTQRTKPDIDDIPMGV-----------PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       125 ~~~~~~~~~~~~~~dg~~~~~-----------~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      .-..+|-....+.+.| .+.+           .++..++..+.. ..|+..+.|||||.-
T Consensus       404 ~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~  461 (626)
T KOG2106|consen  404 KIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAF  461 (626)
T ss_pred             EEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCE
Confidence            1111111112222333 2211           133356777777 899999999999964

>KOG1274|consensus

Probab=99.21  E-value=2.5e-10  Score=101.72  Aligned_cols=99  Identities=10%  Similarity=0.190  Sum_probs=80.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .+++|+.+++|.++....++.... ....-.++.++|+.+   ++++|.||+|-.||+-++.....     ...+++|.+
T Consensus        68 ~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~---g~~iaagsdD~~vK~~~~~D~s~-----~~~lrgh~a  139 (933)
T KOG1274|consen   68 HFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGS---GKMIAAGSDDTAVKLLNLDDSSQ-----EKVLRGHDA  139 (933)
T ss_pred             ceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecC---CcEEEeecCceeEEEEeccccch-----heeecccCC
Confidence            378999999999999887764311 123456788888875   48999999999999999887543     235579999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       +|.+|.|+| .+.+||+.+.||+|++||+
T Consensus       140 -pVl~l~~~p-~~~fLAvss~dG~v~iw~~  167 (933)
T KOG1274|consen  140 -PVLQLSYDP-KGNFLAVSSCDGKVQIWDL  167 (933)
T ss_pred             -ceeeeeEcC-CCCEEEEEecCceEEEEEc
Confidence             999999999 5679999999999999999

>KOG1034|consensus

Probab=99.18  E-value=5.2e-10  Score=90.36  Aligned_cols=125  Identities=14%  Similarity=0.173  Sum_probs=88.5

Q ss_pred             CcEEEEECCCCC--e-EEEe---ecCCCEEEEEecCCCCC-CCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           9 GDLKMFDLKTMS--L-KWET---NLKNGVCGVDFDRRDIP-MNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         9 g~iklWDl~~~~--~-~~~~---~~~~~V~sv~f~~~~~~-~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      .++.|+......  . .+..   .+.+..+.++|.-+-.. .-.||.|+.-|.|||.|+.+.++..     .+.+|.. +
T Consensus        64 ~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~-----~~~ghG~-s  137 (385)
T KOG1034|consen   64 NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSK-----NYRGHGG-S  137 (385)
T ss_pred             cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhcc-----ceeccCc-c
Confidence            567777754322  2 2222   13455677777644321 2367888999999999999876543     3469999 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccc
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQP  161 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~  161 (174)
                      |+.++|+|..++++.+||.|.+||||++++                            + .+     .-.+--++||+..
T Consensus       138 INeik~~p~~~qlvls~SkD~svRlwnI~~----------------------------~-~C-----v~VfGG~egHrde  183 (385)
T KOG1034|consen  138 INEIKFHPDRPQLVLSASKDHSVRLWNIQT----------------------------D-VC-----VAVFGGVEGHRDE  183 (385)
T ss_pred             chhhhcCCCCCcEEEEecCCceEEEEeccC----------------------------C-eE-----EEEecccccccCc
Confidence            999999999999999999999999999911                            0 00     0013334689999


Q ss_pred             eeeeeeCCCCCC
Q psy6415         162 INSLDWSADKLG  173 (174)
Q Consensus       162 V~~l~~spd~~~  173 (174)
                      |.|++||+||.-
T Consensus       184 VLSvD~~~~gd~  195 (385)
T KOG1034|consen  184 VLSVDFSLDGDR  195 (385)
T ss_pred             EEEEEEcCCCCe
Confidence            999999999853

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.17  E-value=8e-10  Score=84.78  Aligned_cols=69  Identities=19%  Similarity=0.355  Sum_probs=50.5

Q ss_pred             CCCEEEEEecCCCCCCCEEEE--EeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC---CC
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVA--TTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG---SG  102 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s--~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~---Dg  102 (174)
                      ...|.+++|+|++   +.||.  |..++.|.|||++..      .+.++  ++. .++.|.|||+ +.+||.|+.   .|
T Consensus        59 ~~~I~~~~WsP~g---~~favi~g~~~~~v~lyd~~~~------~i~~~--~~~-~~n~i~wsP~-G~~l~~~g~~n~~G  125 (194)
T PF08662_consen   59 EGPIHDVAWSPNG---NEFAVIYGSMPAKVTLYDVKGK------KIFSF--GTQ-PRNTISWSPD-GRFLVLAGFGNLNG  125 (194)
T ss_pred             CCceEEEEECcCC---CEEEEEEccCCcccEEEcCccc------EeEee--cCC-CceEEEECCC-CCEEEEEEccCCCc
Confidence            3469999999975   66644  456789999999742      12233  234 7899999995 567777764   46


Q ss_pred             cEEEEec
Q psy6415         103 SLNLWQL  109 (174)
Q Consensus       103 ~V~lWd~  109 (174)
                      .|.+||+
T Consensus       126 ~l~~wd~  132 (194)
T PF08662_consen  126 DLEFWDV  132 (194)
T ss_pred             EEEEEEC
Confidence            7999999

>KOG1063|consensus

Probab=99.16  E-value=1.5e-10  Score=100.58  Aligned_cols=95  Identities=14%  Similarity=0.326  Sum_probs=75.5

Q ss_pred             CcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           9 GDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         9 g~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      .-|+||+..+-..++. ..|.-.|+.++|||++   .+|++.|+|.++.||....... .++.....++|+. -||++.|
T Consensus       552 AvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg---~~LLsvsRDRt~sl~~~~~~~~-~e~~fa~~k~HtR-IIWdcsW  626 (764)
T KOG1063|consen  552 AVIRLWNTANWLQVQELEGHSLTVTRLAFSPDG---RYLLSVSRDRTVSLYEVQEDIK-DEFRFACLKAHTR-IIWDCSW  626 (764)
T ss_pred             eEEEEEeccchhhhheecccceEEEEEEECCCC---cEEEEeecCceEEeeeeecccc-hhhhhccccccce-EEEEccc
Confidence            3478999876555543 4577889999999985   9999999999999999854322 1222334679999 9999999


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|+ ...|||||.|++|++|..
T Consensus       627 ~pd-e~~FaTaSRDK~VkVW~~  647 (764)
T KOG1063|consen  627 SPD-EKYFATASRDKKVKVWEE  647 (764)
T ss_pred             Ccc-cceeEEecCCceEEEEec
Confidence            995 557999999999999998

>KOG0650|consensus

Probab=99.16  E-value=2.4e-10  Score=98.20  Aligned_cols=40  Identities=13%  Similarity=0.341  Sum_probs=34.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRD   40 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~   40 (174)
                      .||+|++||+|+||.+.||.|+.+....+.|.+|+|+|..
T Consensus       414 wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~  453 (733)
T KOG0650|consen  414 WLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLS  453 (733)
T ss_pred             eeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCC
Confidence            4899999999999999999998887777888899998865

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.16  E-value=1.5e-09  Score=86.77  Aligned_cols=96  Identities=21%  Similarity=0.331  Sum_probs=75.1

Q ss_pred             EecCCcEEEEECCC-CCeEE-EeecCCCEEEEEecCCCCCCCEEEEEeC-CCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           5 GYDNGDLKMFDLKT-MSLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTL-EAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         5 gs~Dg~iklWDl~~-~~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~-Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +..|+.+++||+.. ..... ...|...|..++|+|++   ..+++++. |+.+++||++....     ...+..|.. .
T Consensus       130 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~  200 (466)
T COG2319         130 SSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDG---KLLASGSSLDGTIKLWDLRTGKP-----LSTLAGHTD-P  200 (466)
T ss_pred             CCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCC---CEEEecCCCCCceEEEEcCCCce-----EEeeccCCC-c
Confidence            34499999999987 44433 34567889999999974   57888875 99999999997432     334456888 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.+++|+|++..++++++.|++|++||.
T Consensus       201 v~~~~~~~~~~~~~~~~~~d~~i~~wd~  228 (466)
T COG2319         201 VSSLAFSPDGGLLIASGSSDGTIRLWDL  228 (466)
T ss_pred             eEEEEEcCCcceEEEEecCCCcEEEEEC
Confidence            9999999965446677799999999988

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.15  E-value=2.3e-09  Score=85.73  Aligned_cols=125  Identities=21%  Similarity=0.354  Sum_probs=90.1

Q ss_pred             EEEEec-CCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCC-EEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYD-NGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMN-KLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~-Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~-~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +++++. |+.+++|+++.+....... |...|.+++|+|++   . .+++++.|+.|++||.+......    ..+..|.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~d~~i~~wd~~~~~~~~----~~~~~~~  242 (466)
T COG2319         170 LASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDG---GLLIASGSSDGTIRLWDLSTGKLLR----STLSGHS  242 (466)
T ss_pred             EEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCc---ceEEEEecCCCcEEEEECCCCcEEe----eecCCCC
Confidence            566664 9999999999866655443 67889999999864   4 45555999999999988543221    1356777


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      . .+ -..|+|++ ..+++++.|+.+++|++..                           .         ...+..+.+|
T Consensus       243 ~-~~-~~~~~~~~-~~~~~~~~d~~~~~~~~~~---------------------------~---------~~~~~~~~~~  283 (466)
T COG2319         243 D-SV-VSSFSPDG-SLLASGSSDGTIRLWDLRS---------------------------S---------SSLLRTLSGH  283 (466)
T ss_pred             c-ce-eEeECCCC-CEEEEecCCCcEEEeeecC---------------------------C---------CcEEEEEecC
Confidence            7 54 33799965 7888999999999999910                           0         0012333778


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      ..+|.++.|+|++.
T Consensus       284 ~~~v~~~~~~~~~~  297 (466)
T COG2319         284 SSSVLSVAFSPDGK  297 (466)
T ss_pred             CccEEEEEECCCCC
Confidence            89999999998553

>KOG2110|consensus

Probab=99.13  E-value=1e-09  Score=89.65  Aligned_cols=96  Identities=13%  Similarity=0.262  Sum_probs=76.5

Q ss_pred             CCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCc-EEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAK-LFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~-I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      .|.|.|||+.+-+..... .|++.+-+++|+++|   .+|||+|+.|+ |||+.+.+++...+|.-.+.   .. .|+++
T Consensus       152 ~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G---~llATASeKGTVIRVf~v~~G~kl~eFRRG~~---~~-~IySL  224 (391)
T KOG2110|consen  152 SGDVVLFDTINLQPVNTINAHKGPLAALAFSPDG---TLLATASEKGTVIRVFSVPEGQKLYEFRRGTY---PV-SIYSL  224 (391)
T ss_pred             CceEEEEEcccceeeeEEEecCCceeEEEECCCC---CEEEEeccCceEEEEEEcCCccEeeeeeCCce---ee-EEEEE
Confidence            588999999877665544 578899999999974   99999999998 69999988765444321111   12 68999


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      +|+| +.++|++.|..++|.+|.++.
T Consensus       225 ~Fs~-ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  225 SFSP-DSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             EECC-CCCeEEEecCCCeEEEEEecc
Confidence            9999 567899999999999999955

>KOG1063|consensus

Probab=99.11  E-value=3.5e-10  Score=98.39  Aligned_cols=166  Identities=12%  Similarity=0.078  Sum_probs=106.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE---EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-----------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW---ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-----------   66 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~---~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-----------   66 (174)
                      +||.|+.+..|.++--.+.+...   ...|.+-|.+|+|...+.+.-+|||+|.|..||||.+.-....           
T Consensus       161 lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~  240 (764)
T KOG1063|consen  161 LLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTT  240 (764)
T ss_pred             EEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCcccccccccccc
Confidence            47888889889888765554332   2357788999999986543346789999999999998643200           


Q ss_pred             ----ccee-e----------eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc-------cccccccccce--
Q psy6415          67 ----KGFA-Y----------LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS-------ALRADTNLCSI--  122 (174)
Q Consensus        67 ----~~~~-~----------~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~-------~~~~~~~~~~~--  122 (174)
                          ..+. .          ..+.+|.+ .|+++.|+|. +..|.|+|.|.++.+|.-+.       ..|..+-+++.  
T Consensus       241 ~~~~~~f~~l~~i~~~is~eall~GHeD-WV~sv~W~p~-~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~G  318 (764)
T KOG1063|consen  241 LSNLPVFMILEEIQYRISFEALLMGHED-WVYSVWWHPE-GLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGG  318 (764)
T ss_pred             ccCCceeeeeeeEEEEEehhhhhcCccc-ceEEEEEccc-hhhheecccCcceEEEecCCccceEEEEEEeecccccccc
Confidence                0000 0          01348999 9999999995 45678899999999998743       23333322111  


Q ss_pred             e-----------eeecCC-CCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         123 F-----------RYSSNY-PTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       123 ~-----------~~~~~~-~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      |           .+..+| +--.-|++.|      .......-...||...|.+++|+|.|..|
T Consensus       319 F~g~lw~~n~~~ii~~g~~Gg~hlWkt~d------~~~w~~~~~iSGH~~~V~dv~W~psGefl  376 (764)
T KOG1063|consen  319 FWGGLWSPNSNVIIAHGRTGGFHLWKTKD------KTFWTQEPVISGHVDGVKDVDWDPSGEFL  376 (764)
T ss_pred             eeeEEEcCCCCEEEEecccCcEEEEeccC------ccceeeccccccccccceeeeecCCCCEE
Confidence            1           112222 1111222111      01123456678999999999999998743

>KOG0288|consensus

Probab=99.11  E-value=5.2e-10  Score=92.49  Aligned_cols=99  Identities=15%  Similarity=0.264  Sum_probs=77.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-----cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-----LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-----~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      |.+.+.|.++++.|+++..+...+.     ....++.+.|+|++   .++|+||.||.|+||++.++++.....   ...
T Consensus       356 lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~---~YvaAGS~dgsv~iW~v~tgKlE~~l~---~s~  429 (459)
T KOG0288|consen  356 LLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDG---SYVAAGSADGSVYIWSVFTGKLEKVLS---LST  429 (459)
T ss_pred             EeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCC---ceeeeccCCCcEEEEEccCceEEEEec---cCC
Confidence            5567999999999999998776543     12458889999975   899999999999999999987643221   112


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      -.. .|.+++|+|- +..+++++.++.+.||.
T Consensus       430 s~~-aI~s~~W~~s-G~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  430 SNA-AITSLSWNPS-GSGLLSADKQKAVTLWT  459 (459)
T ss_pred             CCc-ceEEEEEcCC-CchhhcccCCcceEecC
Confidence            222 6999999994 56778899999999993

>KOG0642|consensus

Probab=99.10  E-value=3.2e-10  Score=96.61  Aligned_cols=115  Identities=17%  Similarity=0.201  Sum_probs=85.9

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc---ccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR---EKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG  102 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~---~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg  102 (174)
                      .|.++|+.++|+|.   ...|++++.|++|++|.++....   ....++.++++|.+ +|.+|...+ ++..+.|||-||
T Consensus       292 s~~d~ir~l~~~~s---ep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~g-PVl~v~v~~-n~~~~ysgg~Dg  366 (577)
T KOG0642|consen  292 SHDDCIRALAFHPS---EPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEG-PVLCVVVPS-NGEHCYSGGIDG  366 (577)
T ss_pred             cchhhhhhhhcCCC---CCeEEEeccccchhhhhhcccCCccccceeeeEEEecccC-ceEEEEecC-CceEEEeeccCc
Confidence            35678899999985   37899999999999999944221   12235678899999 999999999 567889999999


Q ss_pred             cEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         103 SLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       103 ~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      +|+.|++      +.+                ....|.     .....|...+.||+..|+.|++|+...
T Consensus       367 ~I~~w~~------p~n----------------~dp~ds-----~dp~vl~~~l~Ghtdavw~l~~s~~~~  409 (577)
T KOG0642|consen  367 TIRCWNL------PPN----------------QDPDDS-----YDPSVLSGTLLGHTDAVWLLALSSTKD  409 (577)
T ss_pred             eeeeecc------CCC----------------CCcccc-----cCcchhccceeccccceeeeeeccccc
Confidence            9999999      100                000111     111246788899999999999998543

>KOG2394|consensus

Probab=99.08  E-value=4.4e-10  Score=95.58  Aligned_cols=94  Identities=13%  Similarity=0.191  Sum_probs=75.5

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      ..|+..+|+|+   +..||+.|.||.+||||..+.+.+..+     +..=+ ...+|.||| |+.++|+||+|.-|.+|.
T Consensus       291 g~in~f~FS~D---G~~LA~VSqDGfLRvF~fdt~eLlg~m-----kSYFG-GLLCvcWSP-DGKyIvtGGEDDLVtVwS  360 (636)
T KOG2394|consen  291 GSINEFAFSPD---GKYLATVSQDGFLRIFDFDTQELLGVM-----KSYFG-GLLCVCWSP-DGKYIVTGGEDDLVTVWS  360 (636)
T ss_pred             ccccceeEcCC---CceEEEEecCceEEEeeccHHHHHHHH-----Hhhcc-ceEEEEEcC-CccEEEecCCcceEEEEE
Confidence            46888999996   499999999999999999987643221     22234 789999999 567999999999999999


Q ss_pred             ccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCC
Q psy6415         109 LVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSA  169 (174)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~sp  169 (174)
                      +                            ++         .+++..=.||.++|..++|-|
T Consensus       361 f----------------------------~e---------rRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  361 F----------------------------EE---------RRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             e----------------------------cc---------ceEEEeccccccceeeEeecc
Confidence            9                            02         235666679999999999986

>KOG1273|consensus

Probab=99.07  E-value=1.1e-09  Score=88.25  Aligned_cols=69  Identities=17%  Similarity=0.262  Sum_probs=60.2

Q ss_pred             EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -.++.||+.|   .+||.|..||.|-|||+.+....     ..+.+|-. +|.+++|||+ +..|.|+|.|-.|++||+
T Consensus        26 a~~~~Fs~~G---~~lAvGc~nG~vvI~D~~T~~ia-----r~lsaH~~-pi~sl~WS~d-gr~LltsS~D~si~lwDl   94 (405)
T KOG1273|consen   26 AECCQFSRWG---DYLAVGCANGRVVIYDFDTFRIA-----RMLSAHVR-PITSLCWSRD-GRKLLTSSRDWSIKLWDL   94 (405)
T ss_pred             cceEEeccCc---ceeeeeccCCcEEEEEccccchh-----hhhhcccc-ceeEEEecCC-CCEeeeecCCceeEEEec
Confidence            6788999974   89999999999999999986533     24468999 9999999995 568899999999999999

>KOG1539|consensus

Probab=99.07  E-value=4.1e-09  Score=93.39  Aligned_cols=99  Identities=15%  Similarity=0.296  Sum_probs=85.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |+.|+..|.++||++++++.++++. +...|+++.=+|-   -+.+|.|..+|+|.|++++..+.+.     +++...+ 
T Consensus       175 IvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPa---LDVVaiG~~~G~ViifNlK~dkil~-----sFk~d~g-  245 (910)
T KOG1539|consen  175 IVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPA---LDVVAIGLENGTVIIFNLKFDKILM-----SFKQDWG-  245 (910)
T ss_pred             EEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCc---ceEEEEeccCceEEEEEcccCcEEE-----EEEcccc-
Confidence            6789999999999999999998865 4688999988874   4789999999999999999976443     3433346 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|.+++|.-++..++|+|+..|.+-+||+
T Consensus       246 ~VtslSFrtDG~p~las~~~~G~m~~wDL  274 (910)
T KOG1539|consen  246 RVTSLSFRTDGNPLLASGRSNGDMAFWDL  274 (910)
T ss_pred             ceeEEEeccCCCeeEEeccCCceEEEEEc
Confidence            99999999988899999999999999999

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=1.3e-09  Score=92.87  Aligned_cols=92  Identities=18%  Similarity=0.248  Sum_probs=62.9

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +..|.+||...........+...+.+++|+|++   +.|+.++.+   ..|++||+++++..   .+..+.+|    ...
T Consensus       183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG---~~la~~s~~~~~~~i~i~dl~tg~~~---~l~~~~g~----~~~  252 (429)
T PRK01742        183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDG---SKLAYVSFENKKSQLVVHDLRSGARK---VVASFRGH----NGA  252 (429)
T ss_pred             eEEEEEECCCCCCceEeccCCCccccceEcCCC---CEEEEEEecCCCcEEEEEeCCCCceE---EEecCCCc----cCc
Confidence            578999999876654434456679999999975   888887654   47999999875421   12222333    346


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++|+|++..++.+.+.+|.+.||.+
T Consensus       253 ~~wSPDG~~La~~~~~~g~~~Iy~~  277 (429)
T PRK01742        253 PAFSPDGSRLAFASSKDGVLNIYVM  277 (429)
T ss_pred             eeECCCCCEEEEEEecCCcEEEEEE
Confidence            8999965444444457898888766

>KOG2919|consensus

Probab=99.06  E-value=1.4e-09  Score=87.93  Aligned_cols=131  Identities=12%  Similarity=0.169  Sum_probs=96.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe---ecCC---CEEEEEecCCCCCCCEEEEEeCCCcEEEEEC-CCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKN---GVCGVDFDRRDIPMNKLVATTLEAKLFVFDL-KTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~---~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~-~~~~~~~~~~~~~   73 (174)
                      +.|+.+.|.-|++||.-+|++....   .|.+   +-.+++|+|++   .+|. ++..+.||+||+ |.+.....+....
T Consensus       125 l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DG---eqlf-aGykrcirvFdt~RpGr~c~vy~t~~  200 (406)
T KOG2919|consen  125 LFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDG---EQLF-AGYKRCIRVFDTSRPGRDCPVYTTVT  200 (406)
T ss_pred             eeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCC---CeEe-ecccceEEEeeccCCCCCCcchhhhh
Confidence            3678889999999999999876543   3333   35689999985   5555 567889999999 5543222221100


Q ss_pred             --ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccce
Q psy6415          74 --EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTL  151 (174)
Q Consensus        74 --~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~l  151 (174)
                        -.+..+ -|.+++|||.+..++|.|+.-.++-|+.-                             +|        +.+
T Consensus       201 ~~k~gq~g-iisc~a~sP~~~~~~a~gsY~q~~giy~~-----------------------------~~--------~~p  242 (406)
T KOG2919|consen  201 KGKFGQKG-IISCFAFSPMDSKTLAVGSYGQRVGIYND-----------------------------DG--------RRP  242 (406)
T ss_pred             cccccccc-eeeeeeccCCCCcceeeecccceeeeEec-----------------------------CC--------CCc
Confidence              112345 78889999998889999999888888877                             33        246


Q ss_pred             eeeeeccccceeeeeeCCCCCC
Q psy6415         152 LQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       152 l~~~~~h~~~V~~l~~spd~~~  173 (174)
                      ++.+.||...|.-|.|.+||.-
T Consensus       243 l~llggh~gGvThL~~~edGn~  264 (406)
T KOG2919|consen  243 LQLLGGHGGGVTHLQWCEDGNK  264 (406)
T ss_pred             eeeecccCCCeeeEEeccCcCe
Confidence            7888899999999999999864

>KOG1517|consensus

Probab=99.06  E-value=2.7e-09  Score=96.71  Aligned_cols=102  Identities=15%  Similarity=0.339  Sum_probs=75.8

Q ss_pred             CEEEEecCCcEEEEECCCCCe---EE-EeecC--CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL---KW-ETNLK--NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~---~~-~~~~~--~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +||+|..||.|++||.|.-..   +. ...|.  .+|..+.+.+.+  ...|++||.||.|++||+|..... .+.  ++
T Consensus      1223 ~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G--~~elvSgs~~G~I~~~DlR~~~~e-~~~--~i 1297 (1387)
T KOG1517|consen 1223 IIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQG--LGELVSGSQDGDIQLLDLRMSSKE-TFL--TI 1297 (1387)
T ss_pred             eEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCC--CcceeeeccCCeEEEEecccCccc-ccc--ee
Confidence            589999999999999986542   21 12344  349999999865  247999999999999999985322 222  23


Q ss_pred             cccC--cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 KAHK--ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ~~h~--~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..|.  +..+.++..|++ ..++|+|+. +.|+||++
T Consensus      1298 v~~~~yGs~lTal~VH~h-apiiAsGs~-q~ikIy~~ 1332 (1387)
T KOG1517|consen 1298 VAHWEYGSALTALTVHEH-APIIASGSA-QLIKIYSL 1332 (1387)
T ss_pred             eeccccCccceeeeeccC-CCeeeecCc-ceEEEEec
Confidence            3443  214889999995 568999998 99999999

>KOG2111|consensus

Probab=99.04  E-value=3.6e-09  Score=85.12  Aligned_cols=98  Identities=11%  Similarity=0.270  Sum_probs=77.3

Q ss_pred             ecCCcEEEEECCCCCe---EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc-EEEEECCCcccccceeeeeecccCcCc
Q psy6415           6 YDNGDLKMFDLKTMSL---KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK-LFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~---~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~-I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      -.=|.|+|-|+.....   .....|...|.+|+.+.+   |..+||+|..|| |||||.++++.+.++.    ++-....
T Consensus       156 ~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~---Gt~vATaStkGTLIRIFdt~~g~~l~E~R----RG~d~A~  228 (346)
T KOG2111|consen  156 FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQ---GTLVATASTKGTLIRIFDTEDGTLLQELR----RGVDRAD  228 (346)
T ss_pred             CccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCC---ccEEEEeccCcEEEEEEEcCCCcEeeeee----cCCchhe
Confidence            3458899999876554   344568899999999986   489999999998 8999999987655432    1222227


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      |++++||| +..+||.+|.-|||.|+.++.
T Consensus       229 iy~iaFSp-~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  229 IYCIAFSP-NSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             EEEEEeCC-CccEEEEEcCCCeEEEEEeec
Confidence            99999999 677999999999999999943

>KOG0644|consensus

Probab=99.02  E-value=9.6e-11  Score=103.78  Aligned_cols=96  Identities=14%  Similarity=0.254  Sum_probs=80.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .|++||+|..||||...++.+... ..|...|+.++.+.+.   -.++++|.|..|++|-++...+     +..+.+|++
T Consensus       204 ~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n---~~iaaaS~D~vIrvWrl~~~~p-----vsvLrghtg  275 (1113)
T KOG0644|consen  204 YIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNN---TMIAAASNDKVIRVWRLPDGAP-----VSVLRGHTG  275 (1113)
T ss_pred             eEeecCccceeeeeeccchhhhccCCCCccccchhccchhh---hhhhhcccCceEEEEecCCCch-----HHHHhcccc
Confidence            478999999999999998887655 4577789999888752   4578999999999999998654     345679999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                       .|.+++|+|.     ++.+.||++++||..
T Consensus       276 -avtaiafsP~-----~sss~dgt~~~wd~r  300 (1113)
T KOG0644|consen  276 -AVTAIAFSPR-----ASSSDDGTCRIWDAR  300 (1113)
T ss_pred             -ceeeeccCcc-----ccCCCCCceEecccc
Confidence             9999999994     478999999999994

>KOG4714|consensus

Probab=99.01  E-value=4.1e-10  Score=88.62  Aligned_cols=93  Identities=19%  Similarity=0.293  Sum_probs=72.4

Q ss_pred             cEEEEECCCCCeE-EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEc
Q psy6415          10 DLKMFDLKTMSLK-WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHL   88 (174)
Q Consensus        10 ~iklWDl~~~~~~-~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fs   88 (174)
                      ..++|+++..+.. ........|.+++-+|.  +.+.++.|+.||.|-|||.|+..    +....+++|+. +||.|-||
T Consensus       160 ~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~--qq~~v~cgt~dg~~~l~d~rn~~----~p~S~l~ahk~-~i~eV~FH  232 (319)
T KOG4714|consen  160 NFYANTLDPIKTLIPSKKALDAVTALCSHPA--QQHLVCCGTDDGIVGLWDARNVA----MPVSLLKAHKA-EIWEVHFH  232 (319)
T ss_pred             ceeeecccccccccccccccccchhhhCCcc--cccEEEEecCCCeEEEEEccccc----chHHHHHHhhh-hhhheecc
Confidence            4566776544322 12222345999999986  35778899999999999999863    34445679999 99999999


Q ss_pred             CCCCCEEEEEcCCCcEEEEec
Q psy6415          89 PQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        89 P~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.++..|.++++||.+..||.
T Consensus       233 pk~p~~Lft~sedGslw~wda  253 (319)
T KOG4714|consen  233 PKNPEHLFTCSEDGSLWHWDA  253 (319)
T ss_pred             CCCchheeEecCCCcEEEEcC
Confidence            999999999999999999998

>KOG1587|consensus

Probab=99.01  E-value=8.7e-09  Score=90.01  Aligned_cols=140  Identities=17%  Similarity=0.202  Sum_probs=96.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeE-------EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc-ccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK-------WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR-EKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~-------~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~-~~~~~~~   72 (174)
                      +||.|..+|+|-+||++.+...       ....|...|..+.|..+..+ ..++++|.||.|..|+++.... .......
T Consensus       257 ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~-~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~  335 (555)
T KOG1587|consen  257 LLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHN-TEFFSLSSDGSICSWDTDMLSLPVEGLLLE  335 (555)
T ss_pred             eEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCC-CceEEEecCCcEeeeeccccccchhhcccc
Confidence            4789999999999999877652       12346778888888775433 5699999999999999987543 1111111


Q ss_pred             eec-----ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCCcccCCCCCccccc
Q psy6415          73 SEK-----AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKPDIDDIPMGVP  146 (174)
Q Consensus        73 ~~~-----~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~~~~~~  146 (174)
                      ...     .+....+.+++|.|.++..|+.|+.+|.|.--+.                 .+| +        .     ..
T Consensus       336 ~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r-----------------~g~~~--------~-----~~  385 (555)
T KOG1587|consen  336 SKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCR-----------------KGYTP--------A-----PE  385 (555)
T ss_pred             cccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEec-----------------cCCcc--------c-----cc
Confidence            100     1111267899999999999999999998876333                 011 0        0     00


Q ss_pred             cccceeeeeeccccceeeeeeCCCC
Q psy6415         147 GSLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       147 ~~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                      ...+.+..+..|-.+|+.+.+||=+
T Consensus       386 ~~~~~~~~~~~h~g~v~~v~~nPF~  410 (555)
T KOG1587|consen  386 VSYKGHSTFITHIGPVYAVSRNPFY  410 (555)
T ss_pred             ccccccccccccCcceEeeecCCCc
Confidence            1124466778899999999999843

>KOG0644|consensus

Probab=98.99  E-value=2.4e-10  Score=101.36  Aligned_cols=97  Identities=13%  Similarity=0.230  Sum_probs=83.4

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEE
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLN  105 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~  105 (174)
                      .|.+.|+++.|++.   +.++++|++|..||||...+..++     .+..+|++ .|..++.+. +..++|++|.|..|+
T Consensus       188 gH~naVyca~fDrt---g~~Iitgsdd~lvKiwS~et~~~l-----As~rGhs~-ditdlavs~-~n~~iaaaS~D~vIr  257 (1113)
T KOG0644|consen  188 GHRNAVYCAIFDRT---GRYIITGSDDRLVKIWSMETARCL-----ASCRGHSG-DITDLAVSS-NNTMIAAASNDKVIR  257 (1113)
T ss_pred             hhhhheeeeeeccc---cceEeecCccceeeeeeccchhhh-----ccCCCCcc-ccchhccch-hhhhhhhcccCceEE
Confidence            35678999999986   489999999999999998886654     45579999 999999988 556889999999999


Q ss_pred             EEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCC
Q psy6415         106 LWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSA  169 (174)
Q Consensus       106 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~sp  169 (174)
                      +|.+                            .+|         .++..+.||+..|.+|+|||
T Consensus       258 vWrl----------------------------~~~---------~pvsvLrghtgavtaiafsP  284 (1113)
T KOG0644|consen  258 VWRL----------------------------PDG---------APVSVLRGHTGAVTAIAFSP  284 (1113)
T ss_pred             EEec----------------------------CCC---------chHHHHhccccceeeeccCc
Confidence            9999                            244         46788899999999999999

>KOG1523|consensus

Probab=98.99  E-value=5.1e-09  Score=84.42  Aligned_cols=147  Identities=14%  Similarity=0.100  Sum_probs=101.3

Q ss_pred             EEEEecCCcEEEEECCC-CCeE---EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYDNGDLKMFDLKT-MSLK---WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~-~~~~---~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      |++|+.|..-.+|.... +.-.   ..+.+...+.+|.|+|..   |++|+||.-..|.||-++..+.== ..-+.-+.+
T Consensus        70 Ivtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~e---nkFAVgSgar~isVcy~E~ENdWW-VsKhikkPi  145 (361)
T KOG1523|consen   70 IVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKE---NKFAVGSGARLISVCYYEQENDWW-VSKHIKKPI  145 (361)
T ss_pred             eeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcC---ceEEeccCccEEEEEEEeccccee-hhhhhCCcc
Confidence            78999999999999843 3321   224467889999999974   999999999999999998754200 000011355


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCCcccCCCCCccccccccceeeeee
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKPDIDDIPMGVPGSLTLLQEAT  156 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~~~~~~~~~~ll~~~~  156 (174)
                      .. .|.++.||| ++-+||+||.|+.++++..             |.=+.+- |....|    |..   ..-++|+.++.
T Consensus       146 rS-tv~sldWhp-nnVLlaaGs~D~k~rVfSa-------------yIK~Vdekpap~pW----gsk---~PFG~lm~E~~  203 (361)
T KOG1523|consen  146 RS-TVTSLDWHP-NNVLLAAGSTDGKCRVFSA-------------YIKGVDEKPAPTPW----GSK---MPFGQLMSEAS  203 (361)
T ss_pred             cc-ceeeeeccC-CcceecccccCcceeEEEE-------------eeeccccCCCCCCC----ccC---CcHHHHHHhhc
Confidence            66 899999999 6679999999999999987             2222111 111111    100   12245777776


Q ss_pred             ccccceeeeeeCCCCCCC
Q psy6415         157 LSSQPINSLDWSADKLGL  174 (174)
Q Consensus       157 ~h~~~V~~l~~spd~~~~  174 (174)
                      ..-..|+.+.|||+|.-|
T Consensus       204 ~~ggwvh~v~fs~sG~~l  221 (361)
T KOG1523|consen  204 SSGGWVHGVLFSPSGNRL  221 (361)
T ss_pred             cCCCceeeeEeCCCCCEe
Confidence            677899999999998643

>KOG2055|consensus

Probab=98.97  E-value=3.7e-09  Score=88.53  Aligned_cols=103  Identities=9%  Similarity=0.082  Sum_probs=72.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-cceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-KGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-~~~~~~~~~~h~   78 (174)
                      |.+.+.+|.|.+||+++..++......++|+  +++.+++   +.+||+||..|.|.|||.++.-.- .-.++.++..-.
T Consensus       359 l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~n---g~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLt  435 (514)
T KOG2055|consen  359 LLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLN---GSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLT  435 (514)
T ss_pred             EEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCC---CceEEeccCcceEEEeccchhhccCCCCchhhhhhhh
Confidence            4556678999999999999888776666664  5666675   489999999999999997642100 001112222333


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcC--CCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGG--SGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~--Dg~V~lWd~  109 (174)
                      . .|.+++|+| +.++||.||.  +..+||=-+
T Consensus       436 t-~Itsl~Fn~-d~qiLAiaS~~~knalrLVHv  466 (514)
T KOG2055|consen  436 T-AITSLQFNH-DAQILAIASRVKKNALRLVHV  466 (514)
T ss_pred             e-eeeeeeeCc-chhhhhhhhhccccceEEEec
Confidence            4 799999999 5678888875  556777666

>KOG0974|consensus

Probab=98.96  E-value=8.3e-09  Score=93.10  Aligned_cols=98  Identities=12%  Similarity=0.225  Sum_probs=80.9

Q ss_pred             CEEEEecCCcEEEEECCCCCe-EEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-KWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .+++|+.-+.|.+|+...... .....|.+.|.++.++-+   +.++++.|+|.+||+|++.+.+...    -+.-+|+.
T Consensus       147 ~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~d---g~~i~s~SdDRsiRlW~i~s~~~~~----~~~fgHsa  219 (967)
T KOG0974|consen  147 YIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLD---GRYIASVSDDRSIRLWPIDSREVLG----CTGFGHSA  219 (967)
T ss_pred             EEEeccccccEEEEeccccCCcceecccCCceEEEEEccC---CcEEEEEecCcceeeeecccccccC----cccccccc
Confidence            378999999999999874333 234568888999999875   4999999999999999999876432    12238999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .||.+.|+|.   .++|+++|-+.++|+.
T Consensus       220 -Rvw~~~~~~n---~i~t~gedctcrvW~~  245 (967)
T KOG0974|consen  220 -RVWACCFLPN---RIITVGEDCTCRVWGV  245 (967)
T ss_pred             -eeEEEEeccc---eeEEeccceEEEEEec
Confidence             9999999994   7899999999999987

>KOG1272|consensus

Probab=98.95  E-value=1.6e-09  Score=90.85  Aligned_cols=95  Identities=14%  Similarity=0.222  Sum_probs=71.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |-+|...|+|.+|.......+. .+.|.+.|.+|+++|.   |+++||++.|..++|||+|+...++     +... .- 
T Consensus       266 ih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~---G~YMaTtG~Dr~~kIWDlR~~~ql~-----t~~t-p~-  335 (545)
T KOG1272|consen  266 IHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRG---GRYMATTGLDRKVKIWDLRNFYQLH-----TYRT-PH-  335 (545)
T ss_pred             EEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCC---CcEEeecccccceeEeeeccccccc-----eeec-CC-
Confidence            5678999999999998776543 3457899999999997   4999999999999999999865332     2222 22 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +...++||-  ..+||.+- -..|.||.-
T Consensus       336 ~a~~ls~Sq--kglLA~~~-G~~v~iw~d  361 (545)
T KOG1272|consen  336 PASNLSLSQ--KGLLALSY-GDHVQIWKD  361 (545)
T ss_pred             Ccccccccc--ccceeeec-CCeeeeehh
Confidence            567788885  44666544 446999965

>KOG1272|consensus

Probab=98.94  E-value=1.5e-09  Score=91.05  Aligned_cols=99  Identities=14%  Similarity=0.121  Sum_probs=82.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+++..|.++.-|+.+|+++..+.. .+.+..+.-||..   ..+-+|...|+|.+|.....+++.     .+..|.+
T Consensus       223 LL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~N---aVih~GhsnGtVSlWSP~skePLv-----KiLcH~g  294 (545)
T KOG1272|consen  223 LLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYN---AVIHLGHSNGTVSLWSPNSKEPLV-----KILCHRG  294 (545)
T ss_pred             eeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCcc---ceEEEcCCCceEEecCCCCcchHH-----HHHhcCC
Confidence            589999999999999999998755443 3557778888862   456689999999999998877653     2348999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       +|.+|++.| ++.++||+|.|..|+|||+
T Consensus       295 -~V~siAv~~-~G~YMaTtG~Dr~~kIWDl  322 (545)
T KOG1272|consen  295 -PVSSIAVDR-GGRYMATTGLDRKVKIWDL  322 (545)
T ss_pred             -CcceEEECC-CCcEEeecccccceeEeee
Confidence             999999999 6789999999999999999

>KOG0974|consensus

Probab=98.93  E-value=3e-09  Score=95.92  Aligned_cols=97  Identities=14%  Similarity=0.247  Sum_probs=82.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE--EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW--ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~--~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|||.|+|.++++|++.+++...  -+.|...|..+.|.|     +.|+|++.|-+.++|+....+      +..+..|.
T Consensus       189 ~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~-----n~i~t~gedctcrvW~~~~~~------l~~y~~h~  257 (967)
T KOG0974|consen  189 YIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLP-----NRIITVGEDCTCRVWGVNGTQ------LEVYDEHS  257 (967)
T ss_pred             EEEEEecCcceeeeecccccccCcccccccceeEEEEecc-----ceeEEeccceEEEEEecccce------ehhhhhhh
Confidence            48999999999999999887653  367889999999998     689999999999999776532      22456888


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.||.++..+ +..+.+|++.||++++|++
T Consensus       258 g~~iw~~~~~~-~~~~~vT~g~Ds~lk~~~l  287 (967)
T KOG0974|consen  258 GKGIWKIAVPI-GVIIKVTGGNDSTLKLWDL  287 (967)
T ss_pred             hcceeEEEEcC-CceEEEeeccCcchhhhhh
Confidence            77899999999 5678999999999999999

>KOG2919|consensus

Probab=98.93  E-value=1.1e-08  Score=82.88  Aligned_cols=101  Identities=15%  Similarity=0.230  Sum_probs=73.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ++|.|+--.++-|+.-..+...+. ..|.++|+-+.|.+++   +.|.+|+ .|-.|-.||+|.-.    .++..+..|.
T Consensus       222 ~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edG---n~lfsGaRk~dkIl~WDiR~~~----~pv~~L~rhv  294 (406)
T KOG2919|consen  222 TLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDG---NKLFSGARKDDKILCWDIRYSR----DPVYALERHV  294 (406)
T ss_pred             ceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCc---CeecccccCCCeEEEEeehhcc----chhhhhhhhc
Confidence            467888888888887766665544 4578999999999975   8999987 57889999999742    2233334443


Q ss_pred             cCcEEEEEE--cCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKH--LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~f--sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...=..|-|  -| .+++||+|+.||.|++||+
T Consensus       295 ~~TNQRI~FDld~-~~~~LasG~tdG~V~vwdl  326 (406)
T KOG2919|consen  295 GDTNQRILFDLDP-KGEILASGDTDGSVRVWDL  326 (406)
T ss_pred             cCccceEEEecCC-CCceeeccCCCccEEEEec
Confidence            311123333  46 4679999999999999999

>KOG1310|consensus

Probab=98.93  E-value=4e-09  Score=90.22  Aligned_cols=107  Identities=16%  Similarity=0.232  Sum_probs=84.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc---cc--eeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE---KG--FAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~---~~--~~~~~   73 (174)
                      +|||||+|-.+.|||.-..+++..  ..|...|.++.|=|.. +..+++||..|..|+|+|+...+..   ++  .....
T Consensus        64 lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~t-nnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~  142 (758)
T KOG1310|consen   64 LLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYT-NNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRC  142 (758)
T ss_pred             EEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccC-CCeEEEeccCcceEEEEecccccccccccCccchhhh
Confidence            589999999999999877666554  3578899999999975 2356789999999999999852210   11  11223


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +..|.. .|-.++--|.++.+|-+|++||+|+-+|+
T Consensus       143 ~~cht~-rVKria~~p~~PhtfwsasEDGtirQyDi  177 (758)
T KOG1310|consen  143 WSCHTD-RVKRIATAPNGPHTFWSASEDGTIRQYDI  177 (758)
T ss_pred             hhhhhh-hhhheecCCCCCceEEEecCCcceeeecc
Confidence            346777 88888999988899999999999999999

>KOG1408|consensus

Probab=98.92  E-value=1.2e-08  Score=89.58  Aligned_cols=99  Identities=17%  Similarity=0.278  Sum_probs=85.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee----cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN----LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~----~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      ++++++.|..|+|||+.+++....+.    +.+..--|..+|.   +.+||+...|+++.++|.-+++|...+     .+
T Consensus       610 ~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPS---giY~atScsdktl~~~Df~sgEcvA~m-----~G  681 (1080)
T KOG1408|consen  610 LVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPS---GIYLATSCSDKTLCFVDFVSGECVAQM-----TG  681 (1080)
T ss_pred             eEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCC---ccEEEEeecCCceEEEEeccchhhhhh-----cC
Confidence            47899999999999999998876543    3355778889996   489999999999999999999886433     49


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.. .|..+.|.++ -..|++.++||.|-+|.+
T Consensus       682 HsE-~VTG~kF~nD-CkHlISvsgDgCIFvW~l  712 (1080)
T KOG1408|consen  682 HSE-AVTGVKFLND-CKHLISVSGDGCIFVWKL  712 (1080)
T ss_pred             cch-heeeeeeccc-chhheeecCCceEEEEEC
Confidence            999 9999999995 457899999999999998

>KOG1517|consensus

Probab=98.90  E-value=3.5e-08  Score=89.75  Aligned_cols=103  Identities=14%  Similarity=0.140  Sum_probs=78.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      |.++++-..|+|||....++......  ...|++++-+-.  .++.||+|-.||.||+||.|......  .+...+.|+.
T Consensus      1180 Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~--~gn~i~AGfaDGsvRvyD~R~a~~ds--~v~~~R~h~~ 1255 (1387)
T KOG1517|consen 1180 LLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLV--HGNIIAAGFADGSVRVYDRRMAPPDS--LVCVYREHND 1255 (1387)
T ss_pred             EEecCCeeEEEEEecccceeEeecccCCCccceeeccccc--CCceEEEeecCCceEEeecccCCccc--cceeecccCC
Confidence            45556678999999988776654332  345777766554  36899999999999999999765421  2334567887


Q ss_pred             Cc--EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TT--VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~--i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .  |..+++.+.+-.-|+||+.||.|++||+
T Consensus      1256 -~~~Iv~~slq~~G~~elvSgs~~G~I~~~Dl 1286 (1387)
T KOG1517|consen 1256 -VEPIVHLSLQRQGLGELVSGSQDGDIQLLDL 1286 (1387)
T ss_pred             -cccceeEEeecCCCcceeeeccCCeEEEEec
Confidence             6  9999999965445899999999999999

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.90  E-value=3.2e-08  Score=84.29  Aligned_cols=98  Identities=12%  Similarity=0.146  Sum_probs=65.4

Q ss_pred             EEEEecC---CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEE-eCCCcEEEE--ECCCcccccceeeeeec
Q psy6415           2 VVAGYDN---GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVAT-TLEAKLFVF--DLKTLHREKGFAYLSEK   75 (174)
Q Consensus         2 lasgs~D---g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~-s~Dg~I~iW--D~~~~~~~~~~~~~~~~   75 (174)
                      ||..+.+   ..|++||+++++............+++|+|++   +.|+.+ +.+|.+.||  |+.+...      ..+.
T Consensus       218 la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG---~~La~~~~~~g~~~Iy~~d~~~~~~------~~lt  288 (429)
T PRK01742        218 LAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDG---SRLAFASSKDGVLNIYVMGANGGTP------SQLT  288 (429)
T ss_pred             EEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCC---CEEEEEEecCCcEEEEEEECCCCCe------Eeec
Confidence            4555433   47999999988654333233334578999974   778765 478877666  5554331      2233


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.. .+.+++|+|++..+++++..+|.++||++
T Consensus       289 ~~~~-~~~~~~wSpDG~~i~f~s~~~g~~~I~~~  321 (429)
T PRK01742        289 SGAG-NNTEPSWSPDGQSILFTSDRSGSPQVYRM  321 (429)
T ss_pred             cCCC-CcCCEEECCCCCEEEEEECCCCCceEEEE
Confidence            5555 67889999976555556667899999988

>KOG2048|consensus

Probab=98.90  E-value=6e-08  Score=84.43  Aligned_cols=97  Identities=12%  Similarity=0.290  Sum_probs=75.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ||.+=.||.|.||+++.+=+...   ......|-+++|.+    +..|.+.+.+|.|.-||+-+.++..     .+..-.
T Consensus        40 lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e----~~RLFS~g~sg~i~EwDl~~lk~~~-----~~d~~g  110 (691)
T KOG2048|consen   40 LAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE----GGRLFSSGLSGSITEWDLHTLKQKY-----NIDSNG  110 (691)
T ss_pred             eeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc----CCeEEeecCCceEEEEecccCceeE-----EecCCC
Confidence            77888899999999987644322   22245699999995    3789999999999999999876432     223334


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      + +||+++.+|. ...++.|+.||.+++.+.
T Consensus       111 g-~IWsiai~p~-~~~l~IgcddGvl~~~s~  139 (691)
T KOG2048|consen  111 G-AIWSIAINPE-NTILAIGCDDGVLYDFSI  139 (691)
T ss_pred             c-ceeEEEeCCc-cceEEeecCCceEEEEec
Confidence            5 9999999995 578899999996666666

>KOG4227|consensus

Probab=98.89  E-value=3.8e-08  Score=81.60  Aligned_cols=102  Identities=18%  Similarity=0.216  Sum_probs=84.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCC---CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-cccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN---GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~---~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~~~~~~~~~   76 (174)
                      .|.+|..+++|.+-|+.+.+.+...++.+   .|+.++-+|.+   +.|++.+.++.|.+||+|... +..-+   .+..
T Consensus       119 ~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~D---N~~~~~t~~~~V~~~D~Rd~~~~~~~~---~~AN  192 (609)
T KOG4227|consen  119 FLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTD---NTLIVVTRAKLVSFIDNRDRQNPISLV---LPAN  192 (609)
T ss_pred             eEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCC---ceEEEEecCceEEEEeccCCCCCCcee---eecC
Confidence            36799999999999999998877766654   79999999975   899999999999999999754 22111   1223


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ... ..+++.|+|..+.+|+++++.+-+.+||.
T Consensus       193 ~~~-~F~t~~F~P~~P~Li~~~~~~~G~~~~D~  224 (609)
T KOG4227|consen  193 SGK-NFYTAEFHPETPALILVNSETGGPNVFDR  224 (609)
T ss_pred             CCc-cceeeeecCCCceeEEeccccCCCCceee
Confidence            334 78999999999999999999999999999

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.89  E-value=6.9e-09  Score=58.57  Aligned_cols=36  Identities=11%  Similarity=0.422  Sum_probs=32.2

Q ss_pred             eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          71 YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        71 ~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      ..++.+|+. +|++++|+|+ +..||||+.|++|++||
T Consensus         4 ~~~~~~h~~-~i~~i~~~~~-~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    4 VRTFRGHSS-SINSIAWSPD-GNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEESSSS-SEEEEEEETT-SSEEEEEETTSEEEEEE
T ss_pred             EEEEcCCCC-cEEEEEEecc-cccceeeCCCCEEEEEC
Confidence            346679999 9999999994 77999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.88  E-value=4e-08  Score=83.80  Aligned_cols=91  Identities=16%  Similarity=0.300  Sum_probs=65.8

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeC---CCcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTL---EAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~---Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ..|.+||.++........+...+.+.+|+|++   +.|+..+.   +..|.+||+++++..      .+..+.+ .+...
T Consensus       182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG---~~lay~s~~~g~~~i~~~dl~~g~~~------~l~~~~g-~~~~~  251 (435)
T PRK05137        182 KRLAIMDQDGANVRYLTDGSSLVLTPRFSPNR---QEITYMSYANGRPRVYLLDLETGQRE------LVGNFPG-MTFAP  251 (435)
T ss_pred             eEEEEECCCCCCcEEEecCCCCeEeeEECCCC---CEEEEEEecCCCCEEEEEECCCCcEE------EeecCCC-cccCc
Confidence            37889999877665555566789999999974   78887653   578999999876431      1224455 67789


Q ss_pred             EEcCCCCCEEEEEcCCCc--EEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGS--LNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~--V~lWd~  109 (174)
                      +|+|++..++++.+.+|.  |.+||+
T Consensus       252 ~~SPDG~~la~~~~~~g~~~Iy~~d~  277 (435)
T PRK05137        252 RFSPDGRKVVMSLSQGGNTDIYTMDL  277 (435)
T ss_pred             EECCCCCEEEEEEecCCCceEEEEEC
Confidence            999976666667777776  555576

>KOG0649|consensus

Probab=98.86  E-value=3.6e-08  Score=77.28  Aligned_cols=101  Identities=20%  Similarity=0.240  Sum_probs=72.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEe-cCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee----eec
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDF-DRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL----SEK   75 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f-~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~----~~~   75 (174)
                      |+.++.|+.+.-||+++|++...+ .|.+=|.+|.- +..    ..+++|++||++||||.+++++++.....    .++
T Consensus       129 i~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~----~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lR  204 (325)
T KOG0649|consen  129 ILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN----GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLR  204 (325)
T ss_pred             EEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC----cceeecCCCccEEEEeccccceeEEeccccChhhcC
Confidence            455668999999999999988765 46677888876 432    57999999999999999998764322111    123


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      .|.+..|-+++-+.   ..++ |+.--.+.||.+.
T Consensus       205 p~~g~wigala~~e---dWlv-CGgGp~lslwhLr  235 (325)
T KOG0649|consen  205 PDWGKWIGALAVNE---DWLV-CGGGPKLSLWHLR  235 (325)
T ss_pred             cccCceeEEEeccC---ceEE-ecCCCceeEEecc
Confidence            44444666776654   4766 4556689999993

>KOG1310|consensus

Probab=98.84  E-value=1.2e-08  Score=87.41  Aligned_cols=112  Identities=12%  Similarity=0.172  Sum_probs=83.0

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCC-CCEEEEEcCCCcE
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQN-RDLFVTCGGSGSL  104 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~-~~~las~s~Dg~V  104 (174)
                      .|.+.|++++|+.++   ..|++||+|-.+-|||.-..+.++.    .-.+|.. -|.++.|-|.. ..+++||..|..|
T Consensus        48 GH~GCVN~LeWn~dG---~lL~SGSDD~r~ivWd~~~~Kllhs----I~TgHta-NIFsvKFvP~tnnriv~sgAgDk~i  119 (758)
T KOG1310|consen   48 GHTGCVNCLEWNADG---ELLASGSDDTRLIVWDPFEYKLLHS----ISTGHTA-NIFSVKFVPYTNNRIVLSGAGDKLI  119 (758)
T ss_pred             cccceecceeecCCC---CEEeecCCcceEEeecchhcceeee----eeccccc-ceeEEeeeccCCCeEEEeccCcceE
Confidence            567889999999874   8999999999999999876554332    1248998 99999999963 4489999999999


Q ss_pred             EEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         105 NLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       105 ~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      +|+|+.++....                    -.+|       ..+.++.+..|...|..|+--|+++
T Consensus       120 ~lfdl~~~~~~~--------------------~d~~-------~~~~~~~~~cht~rVKria~~p~~P  160 (758)
T KOG1310|consen  120 KLFDLDSSKEGG--------------------MDHG-------MEETTRCWSCHTDRVKRIATAPNGP  160 (758)
T ss_pred             EEEecccccccc--------------------cccC-------ccchhhhhhhhhhhhhheecCCCCC
Confidence            999992211100                    0122       2245677778888888888777764

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.82  E-value=5.9e-08  Score=82.70  Aligned_cols=91  Identities=19%  Similarity=0.236  Sum_probs=62.8

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ..|.+||..+........+...+.+.+|+|++   +.|+.++.+   ..|.+||+++++..   .   +....+ .+...
T Consensus       176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG---~~la~~s~~~~~~~I~~~dl~~g~~~---~---l~~~~g-~~~~~  245 (427)
T PRK02889        176 YQLQISDADGQNAQSALSSPEPIISPAWSPDG---TKLAYVSFESKKPVVYVHDLATGRRR---V---VANFKG-SNSAP  245 (427)
T ss_pred             cEEEEECCCCCCceEeccCCCCcccceEcCCC---CEEEEEEccCCCcEEEEEECCCCCEE---E---eecCCC-Cccce
Confidence            45777787655444434556778899999974   888877643   45999999876532   1   112233 56688


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|+|++..++.+.+.+|...||.+
T Consensus       246 ~~SPDG~~la~~~~~~g~~~Iy~~  269 (427)
T PRK02889        246 AWSPDGRTLAVALSRDGNSQIYTV  269 (427)
T ss_pred             EECCCCCEEEEEEccCCCceEEEE
Confidence            999976555557888999888877

>KOG0322|consensus

Probab=98.81  E-value=2.9e-08  Score=78.41  Aligned_cols=53  Identities=21%  Similarity=0.328  Sum_probs=43.3

Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|..|+..| |+.+|||||.||+|++|..    |                                 ++..|..++-|+.
T Consensus       253 Gv~gvrIRp-D~KIlATAGWD~RiRVysw----r---------------------------------tl~pLAVLkyHsa  294 (323)
T KOG0322|consen  253 GVSGVRIRP-DGKILATAGWDHRIRVYSW----R---------------------------------TLNPLAVLKYHSA  294 (323)
T ss_pred             CccceEEcc-CCcEEeecccCCcEEEEEe----c---------------------------------cCCchhhhhhhhc
Confidence            466777788 5679999999999999998    1                                 1335777888999


Q ss_pred             ceeeeeeCCCC
Q psy6415         161 PINSLDWSADK  171 (174)
Q Consensus       161 ~V~~l~~spd~  171 (174)
                      .|++++||||-
T Consensus       295 gvn~vAfspd~  305 (323)
T KOG0322|consen  295 GVNAVAFSPDC  305 (323)
T ss_pred             ceeEEEeCCCC
Confidence            99999999993

>KOG0280|consensus

Probab=98.81  E-value=2.2e-08  Score=80.04  Aligned_cols=99  Identities=19%  Similarity=0.361  Sum_probs=72.9

Q ss_pred             CEEEEecCCcEEEEECC-CCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc-ccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLK-TMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL-HREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~-~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~-~~~~~~~~~~~~~   76 (174)
                      ++.+|++|+.+..||+| .++.+++  ..|..+|+||.-+|..  +..|+||+.|-.|++||.|+. +++..-      .
T Consensus       180 lvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~--~~~I~TGsYDe~i~~~DtRnm~kPl~~~------~  251 (339)
T KOG0280|consen  180 LVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPK--PTYIATGSYDECIRVLDTRNMGKPLFKA------K  251 (339)
T ss_pred             eEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCC--CceEEEeccccceeeeehhcccCccccC------c
Confidence            46899999999999999 4455554  3478899999988863  689999999999999999963 332110      1


Q ss_pred             cCcCcEEEEEEcCCCCC-EEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRD-LFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~-~las~s~Dg~V~lWd~  109 (174)
                      -.+ .||.+.++|.... +||+|-..| .+|-+.
T Consensus       252 v~G-GVWRi~~~p~~~~~lL~~CMh~G-~ki~~~  283 (339)
T KOG0280|consen  252 VGG-GVWRIKHHPEIFHRLLAACMHNG-AKILDS  283 (339)
T ss_pred             ccc-ceEEEEecchhhhHHHHHHHhcC-ceEEEe
Confidence            224 8999999996442 455555554 666666

>KOG1538|consensus

Probab=98.80  E-value=5.7e-08  Score=85.01  Aligned_cols=89  Identities=16%  Similarity=0.282  Sum_probs=66.7

Q ss_pred             CCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      +..+.+||.+.|.+... ..|++.|++|+|+.++   ..+|+|+.|..|-||.-+-.-.++       ..|.+ .|.++.
T Consensus        32 g~rlliyD~ndG~llqtLKgHKDtVycVAys~dG---krFASG~aDK~VI~W~~klEG~Lk-------YSH~D-~IQCMs  100 (1081)
T KOG1538|consen   32 GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDG---KRFASGSADKSVIIWTSKLEGILK-------YSHND-AIQCMS  100 (1081)
T ss_pred             CCEEEEEeCCCcccccccccccceEEEEEEccCC---ceeccCCCceeEEEecccccceee-------eccCC-eeeEee
Confidence            46789999998877655 5688999999999974   899999999999999865421111       26777 888888


Q ss_pred             EcCCCCCEEEEEcCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |+|- ...||||+-. ..-+|..
T Consensus       101 FNP~-~h~LasCsLs-dFglWS~  121 (1081)
T KOG1538|consen  101 FNPI-THQLASCSLS-DFGLWSP  121 (1081)
T ss_pred             cCch-HHHhhhcchh-hccccCh
Confidence            8884 4567777654 3556665

>KOG2394|consensus

Probab=98.80  E-value=1.6e-08  Score=86.23  Aligned_cols=100  Identities=20%  Similarity=0.243  Sum_probs=80.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+.|.||.+||+|..+.+++-. ...-.+..+|+|+||+   .+||+|++|-.|.||.+.....     +..-.+|+.
T Consensus       304 ~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDG---KyIvtGGEDDLVtVwSf~erRV-----VARGqGHkS  375 (636)
T KOG2394|consen  304 YLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDG---KYIVTGGEDDLVTVWSFEERRV-----VARGQGHKS  375 (636)
T ss_pred             eEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCc---cEEEecCCcceEEEEEeccceE-----EEecccccc
Confidence            589999999999999988776432 1224678999999985   9999999999999999987543     223358999


Q ss_pred             CcEEEEEEcCC-----------------------------------------------CCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQ-----------------------------------------------NRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~-----------------------------------------------~~~~las~s~Dg~V~lWd~  109 (174)
                       +|..|+|-|.                                               ....|.|.|.|-.+.|||+
T Consensus       376 -WVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDl  451 (636)
T KOG2394|consen  376 -WVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDL  451 (636)
T ss_pred             -ceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeecccccceEEEEec
Confidence             9999999731                                               0125889999999999999

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.79  E-value=7.1e-08  Score=82.27  Aligned_cols=91  Identities=20%  Similarity=0.216  Sum_probs=63.5

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      .+|.+||..+........+...+.+.+|+|++   +.|+.++.+   ..|.+||+.+++..      .+..... ...++
T Consensus       184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg---~~la~~s~~~~~~~l~~~dl~~g~~~------~l~~~~g-~~~~~  253 (433)
T PRK04922        184 YALQVADSDGYNPQTILRSAEPILSPAWSPDG---KKLAYVSFERGRSAIYVQDLATGQRE------LVASFRG-INGAP  253 (433)
T ss_pred             EEEEEECCCCCCceEeecCCCccccccCCCCC---CEEEEEecCCCCcEEEEEECCCCCEE------EeccCCC-CccCc
Confidence            36899999766554444556678999999974   788877643   46999999876432      1122333 45578


Q ss_pred             EEcCCCCCEEEEEcCCC--cEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSG--SLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg--~V~lWd~  109 (174)
                      +|+|++..++++.+.+|  .|++||+
T Consensus       254 ~~SpDG~~l~~~~s~~g~~~Iy~~d~  279 (433)
T PRK04922        254 SFSPDGRRLALTLSRDGNPEIYVMDL  279 (433)
T ss_pred             eECCCCCEEEEEEeCCCCceEEEEEC
Confidence            99997666666666666  4888888

>KOG1587|consensus

Probab=98.77  E-value=4.1e-08  Score=85.87  Aligned_cols=99  Identities=15%  Similarity=0.189  Sum_probs=71.8

Q ss_pred             EEEEecCCcEEEEE---CCCCC------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC-Ccccccceee
Q psy6415           2 VVAGYDNGDLKMFD---LKTMS------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK-TLHREKGFAY   71 (174)
Q Consensus         2 lasgs~Dg~iklWD---l~~~~------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~-~~~~~~~~~~   71 (174)
                      ++.|.++|.|.-=.   .+.+.      ......|.+.|++|.++|..  ...+++++ |-+||||.-. ...+     +
T Consensus       363 FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~--~k~fls~g-DW~vriWs~~~~~~P-----l  434 (555)
T KOG1587|consen  363 FIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFY--PKNFLSVG-DWTVRIWSEDVIASP-----L  434 (555)
T ss_pred             EEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCc--cceeeeec-cceeEeccccCCCCc-----c
Confidence            46799999987633   33332      11122356789999999986  23344555 9999999977 4332     2


Q ss_pred             eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+..+.. .|.+++|||--+.+||++..||+|.|||+
T Consensus       435 ~~~~~~~~-~v~~vaWSptrpavF~~~d~~G~l~iWDL  471 (555)
T KOG1587|consen  435 LSLDSSPD-YVTDVAWSPTRPAVFATVDGDGNLDIWDL  471 (555)
T ss_pred             hhhhhccc-eeeeeEEcCcCceEEEEEcCCCceehhhh
Confidence            23345556 79999999988889999999999999999

>KOG4227|consensus

Probab=98.77  E-value=1.4e-07  Score=78.29  Aligned_cols=101  Identities=10%  Similarity=0.139  Sum_probs=77.4

Q ss_pred             CEEEEecCCcEEEEECCC------CCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKT------MSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~------~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      +||+|++|-.+++|.+..      -+.+...  .|...|.+++|+-.   ...+.+|..+++|-+-|+++.+.+..+   
T Consensus        70 ~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~---N~~~~SG~~~~~VI~HDiEt~qsi~V~---  143 (609)
T KOG4227|consen   70 FLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLE---NRFLYSGERWGTVIKHDIETKQSIYVA---  143 (609)
T ss_pred             EEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccC---CeeEecCCCcceeEeeecccceeeeee---
Confidence            489999999999999853      2333332  24478999999974   256789999999999999987644222   


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ......+ .|+.+.-||. .++||+.+.+|.|.+||.
T Consensus       144 ~~~~~~~-~VY~m~~~P~-DN~~~~~t~~~~V~~~D~  178 (609)
T KOG4227|consen  144 NENNNRG-DVYHMDQHPT-DNTLIVVTRAKLVSFIDN  178 (609)
T ss_pred             cccCccc-ceeecccCCC-CceEEEEecCceEEEEec
Confidence            1112234 8999999996 579999999999999999

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.76  E-value=2.6e-07  Score=75.65  Aligned_cols=102  Identities=17%  Similarity=0.155  Sum_probs=63.9

Q ss_pred             EEEecCCcEEEEECCCC-Ce---EEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccce--eeeeec
Q psy6415           3 VAGYDNGDLKMFDLKTM-SL---KWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGF--AYLSEK   75 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~-~~---~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~--~~~~~~   75 (174)
                      ++...++.|.+||+++. ..   ............++|+|++   +.+ ++...++.|++||+++...+...  ......
T Consensus        96 v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g---~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~  172 (330)
T PRK11028         96 SASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDN---RTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV  172 (330)
T ss_pred             EEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCC---CEEEEeeCCCCEEEEEEECCCCcccccCCCceecC
Confidence            44556899999999642 21   2222233456788999974   666 45667799999999863211100  000111


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .. . ....++|+|+++.++++...+++|.+|++
T Consensus       173 ~g-~-~p~~~~~~pdg~~lyv~~~~~~~v~v~~~  204 (330)
T PRK11028        173 EG-A-GPRHMVFHPNQQYAYCVNELNSSVDVWQL  204 (330)
T ss_pred             CC-C-CCceEEECCCCCEEEEEecCCCEEEEEEE
Confidence            11 2 45789999965545555555999999999

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.75  E-value=2.9e-07  Score=78.49  Aligned_cols=92  Identities=15%  Similarity=0.190  Sum_probs=60.5

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCCc--EEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEAK--LFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~--I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +..|.+||+.+++..........+.+.+|+|++   ..|+ +.+.++.  |.+||+++.+..      .+..+.. ....
T Consensus       225 ~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG---~~la~~~~~~g~~~Iy~~d~~~~~~~------~Lt~~~~-~~~~  294 (435)
T PRK05137        225 RPRVYLLDLETGQRELVGNFPGMTFAPRFSPDG---RKVVMSLSQGGNTDIYTMDLRSGTTT------RLTDSPA-IDTS  294 (435)
T ss_pred             CCEEEEEECCCCcEEEeecCCCcccCcEECCCC---CEEEEEEecCCCceEEEEECCCCceE------EccCCCC-ccCc
Confidence            568999999998765444455667788999975   6665 5666665  777788875421      2234444 5677


Q ss_pred             EEEcCCCCCEEEEEcCCC--cEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSG--SLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg--~V~lWd~  109 (174)
                      .+|+|++..++.+...+|  .|.+||+
T Consensus       295 ~~~spDG~~i~f~s~~~g~~~Iy~~d~  321 (435)
T PRK05137        295 PSYSPDGSQIVFESDRSGSPQLYVMNA  321 (435)
T ss_pred             eeEcCCCCEEEEEECCCCCCeEEEEEC
Confidence            899996554443333444  4666666

>KOG4547|consensus

Probab=98.74  E-value=2.6e-07  Score=79.36  Aligned_cols=121  Identities=13%  Similarity=0.141  Sum_probs=96.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||-|-..|.|-++++..+++...+   .|.+.|+++.++.+   -..|-|++.|..+-.|+......     ...+...
T Consensus        72 ~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~---~~ciyS~~ad~~v~~~~~~~~~~-----~~~~~~~  143 (541)
T KOG4547|consen   72 MLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQR---LGCIYSVGADLKVVYILEKEKVI-----IRIWKEQ  143 (541)
T ss_pred             EEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccc---cCceEecCCceeEEEEeccccee-----eeeeccC
Confidence            4667778899999999999887654   36788999987764   35789999999999999987542     2233455


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      +. .+.++..+|+ +.++++||.  +|++||++                                     +.|.+.+|+|
T Consensus       144 ~~-~~~sl~is~D-~~~l~~as~--~ik~~~~~-------------------------------------~kevv~~ftg  182 (541)
T KOG4547|consen  144 KP-LVSSLCISPD-GKILLTASR--QIKVLDIE-------------------------------------TKEVVITFTG  182 (541)
T ss_pred             CC-ccceEEEcCC-CCEEEeccc--eEEEEEcc-------------------------------------CceEEEEecC
Confidence            55 7889999995 668888875  89999991                                     2468999999


Q ss_pred             cccceeeeeeCCC
Q psy6415         158 SSQPINSLDWSAD  170 (174)
Q Consensus       158 h~~~V~~l~~spd  170 (174)
                      |..||+.++|--+
T Consensus       183 h~s~v~t~~f~~~  195 (541)
T KOG4547|consen  183 HGSPVRTLSFTTL  195 (541)
T ss_pred             CCcceEEEEEEEe
Confidence            9999999999765

>KOG3914|consensus

Probab=98.74  E-value=3.2e-08  Score=81.59  Aligned_cols=94  Identities=16%  Similarity=0.169  Sum_probs=75.0

Q ss_pred             ecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           6 YDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ++...+.+|....+.+.....|-.-+..|+++|++   +.|+|+..|..|||=.......++.|.    -+|+. -|..+
T Consensus       129 gD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~---~~IitaDRDEkIRvs~ypa~f~Iesfc----lGH~e-FVS~i  200 (390)
T KOG3914|consen  129 GDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDD---QFIITADRDEKIRVSRYPATFVIESFC----LGHKE-FVSTI  200 (390)
T ss_pred             CCceeeeeecccccCcchhhhhhhhhheeeecCCC---CEEEEecCCceEEEEecCcccchhhhc----cccHh-heeee
Confidence            45566666666556666666777889999999985   899999999999998777655555554    38999 99999


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.-| + ..|+|||+|++|++||+
T Consensus       201 sl~~-~-~~LlS~sGD~tlr~Wd~  222 (390)
T KOG3914|consen  201 SLTD-N-YLLLSGSGDKTLRLWDI  222 (390)
T ss_pred             eecc-C-ceeeecCCCCcEEEEec
Confidence            9987 3 46899999999999999

>KOG2111|consensus

Probab=98.73  E-value=5.3e-07  Score=72.84  Aligned_cols=90  Identities=17%  Similarity=0.279  Sum_probs=61.4

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC---------------------------
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK---------------------------   61 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~---------------------------   61 (174)
                      ..|.|||=-...++.++.....|.+|.+.+     +.|+.. .++.|+||...                           
T Consensus        75 NkviIWDD~k~~~i~el~f~~~I~~V~l~r-----~riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k  148 (346)
T KOG2111|consen   75 NKVIIWDDLKERCIIELSFNSEIKAVKLRR-----DRIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNK  148 (346)
T ss_pred             ceEEEEecccCcEEEEEEeccceeeEEEcC-----CeEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCc
Confidence            578899955555665666667777777765     233332 34556666554                           


Q ss_pred             -------------------CcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-EEEEec
Q psy6415          62 -------------------TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS-LNLWQL  109 (174)
Q Consensus        62 -------------------~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~-V~lWd~  109 (174)
                                         ..+..   ....+.+|.. .|-+|+.+- ++.++||||..|| |||||.
T Consensus       149 ~~LafPg~k~GqvQi~dL~~~~~~---~p~~I~AH~s-~Iacv~Ln~-~Gt~vATaStkGTLIRIFdt  211 (346)
T KOG2111|consen  149 SLLAFPGFKTGQVQIVDLASTKPN---APSIINAHDS-DIACVALNL-QGTLVATASTKGTLIRIFDT  211 (346)
T ss_pred             eEEEcCCCccceEEEEEhhhcCcC---CceEEEcccC-ceeEEEEcC-CccEEEEeccCcEEEEEEEc
Confidence                               22110   1234578999 999999998 5789999999998 699999

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=98.72  E-value=6.9e-07  Score=73.14  Aligned_cols=100  Identities=11%  Similarity=0.079  Sum_probs=66.2

Q ss_pred             EEEecCCcEEEEECCC-CCe--EEEeecCCCEEEEEecCCCCCCCEEEEE-eCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           3 VAGYDNGDLKMFDLKT-MSL--KWETNLKNGVCGVDFDRRDIPMNKLVAT-TLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         3 asgs~Dg~iklWDl~~-~~~--~~~~~~~~~V~sv~f~~~~~~~~~l~s~-s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ++.+.|+.|.+||+.+ +.+  +...........++++|++   +.|+++ ..++.|.+|+++......  ..... ...
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~---~~lyv~~~~~~~i~~~~~~~~g~l~--~~~~~-~~~   79 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDK---RHLYVGVRPEFRVLSYRIADDGALT--FAAES-PLP   79 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEEecCCCCccEEECCCC---CEEEEEECCCCcEEEEEECCCCceE--Eeeee-cCC
Confidence            4557799999999974 442  2333344567889999974   776554 568999999997321110  01111 122


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . ....++|+|+++.++++.-.++.|.+|++
T Consensus        80 ~-~p~~i~~~~~g~~l~v~~~~~~~v~v~~~  109 (330)
T PRK11028         80 G-SPTHISTDHQGRFLFSASYNANCVSVSPL  109 (330)
T ss_pred             C-CceEEEECCCCCEEEEEEcCCCeEEEEEE
Confidence            3 34579999976656666666999999999

>KOG0649|consensus

Probab=98.70  E-value=1.4e-07  Score=74.03  Aligned_cols=97  Identities=14%  Similarity=0.244  Sum_probs=72.0

Q ss_pred             EEEEecCCcEEEEECCCCCe------EEEe---ec-----CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSL------KWET---NL-----KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK   67 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~------~~~~---~~-----~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~   67 (174)
                      |++|++ |.|+=|-.+....      .+..   .+     --.|+++...|..   +.++.++.|+.+.-||++++..  
T Consensus        75 Lls~gd-G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~e---nSi~~AgGD~~~y~~dlE~G~i--  148 (325)
T KOG0649|consen   75 LLSGGD-GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSE---NSILFAGGDGVIYQVDLEDGRI--  148 (325)
T ss_pred             eeeccC-ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCC---CcEEEecCCeEEEEEEecCCEE--
Confidence            567765 9999998864321      1111   11     2358999999863   7788888999999999999753  


Q ss_pred             ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          68 GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        68 ~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                         ..++++|++ -|.+|.-...+++ +.||++||+|++||.
T Consensus       149 ---~r~~rGHtD-YvH~vv~R~~~~q-ilsG~EDGtvRvWd~  185 (325)
T KOG0649|consen  149 ---QREYRGHTD-YVHSVVGRNANGQ-ILSGAEDGTVRVWDT  185 (325)
T ss_pred             ---EEEEcCCcc-eeeeeeecccCcc-eeecCCCccEEEEec
Confidence               345679999 9999987433554 578999999999999

>KOG2321|consensus

Probab=98.69  E-value=9.8e-08  Score=82.16  Aligned_cols=100  Identities=12%  Similarity=0.234  Sum_probs=72.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-------cC-----CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-------LK-----NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG   68 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-------~~-----~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~   68 (174)
                      +||+|..||.|..||.|.......+.       +.     ..|+++.|+.++   =.++.|+.+|.|.|||+|..++.- 
T Consensus       189 Lla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g---L~~aVGts~G~v~iyDLRa~~pl~-  264 (703)
T KOG2321|consen  189 LLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG---LHVAVGTSTGSVLIYDLRASKPLL-  264 (703)
T ss_pred             eEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCc---eeEEeeccCCcEEEEEcccCCcee-
Confidence            58899999999999999876543321       22     239999999753   578999999999999999976531 


Q ss_pred             eeeeeecccCcCcEEEEEEcCCC-CCEEEEEcCCCcEEEEec
Q psy6415          69 FAYLSEKAHKATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~  109 (174)
                        +. -....- +|..+.|.+.+ +..++|+. ...++|||-
T Consensus       265 --~k-dh~~e~-pi~~l~~~~~~~q~~v~S~D-k~~~kiWd~  301 (703)
T KOG2321|consen  265 --VK-DHGYEL-PIKKLDWQDTDQQNKVVSMD-KRILKIWDE  301 (703)
T ss_pred             --ec-ccCCcc-ceeeecccccCCCceEEecc-hHHhhhccc
Confidence              11 112234 78899998853 34666544 568999998

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.67  E-value=4.9e-07  Score=77.16  Aligned_cols=90  Identities=16%  Similarity=0.092  Sum_probs=60.6

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe---CCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT---LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s---~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .|.+||..+............+.+.+|+|++   +.|+..+   .+..|.+||+++++..   .+..+.+    .+..++
T Consensus       180 ~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG---~~la~~s~~~g~~~i~i~dl~~G~~~---~l~~~~~----~~~~~~  249 (429)
T PRK03629        180 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG---SKLAYVTFESGRSALVIQTLANGAVR---QVASFPR----HNGAPA  249 (429)
T ss_pred             eEEEEcCCCCCCEEeecCCCceeeeEEcCCC---CEEEEEEecCCCcEEEEEECCCCCeE---EccCCCC----CcCCeE
Confidence            6899999876654444455678999999975   7887654   3467999999876432   1112222    344689


Q ss_pred             EcCCCCCEEEEEcCCC--cEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSG--SLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg--~V~lWd~  109 (174)
                      |+|++..++.+.+.+|  .|.+||+
T Consensus       250 ~SPDG~~La~~~~~~g~~~I~~~d~  274 (429)
T PRK03629        250 FSPDGSKLAFALSKTGSLNLYVMDL  274 (429)
T ss_pred             ECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            9997655555556566  4888888

>KOG0280|consensus

Probab=98.66  E-value=6.2e-07  Score=71.86  Aligned_cols=102  Identities=13%  Similarity=0.152  Sum_probs=73.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEE--E-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW--E-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~--~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      |+++-.+|.+.+=+.....+..  . ..|.-+.....|+...  ++.+.+||+|+.+.-||+|-+.   .+.-+..+-|.
T Consensus       136 i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~--pnlvytGgDD~~l~~~D~R~p~---~~i~~n~kvH~  210 (339)
T KOG0280|consen  136 IFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKE--PNLVYTGGDDGSLSCWDIRIPK---TFIWHNSKVHT  210 (339)
T ss_pred             EEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCC--CceEEecCCCceEEEEEecCCc---ceeeecceeee
Confidence            4555566666644433332221  1 2355667778888753  5788999999999999999432   23333345788


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . .|-++.-+|..+..+|||+.|-.|++||.
T Consensus       211 ~-GV~SI~ss~~~~~~I~TGsYDe~i~~~Dt  240 (339)
T KOG0280|consen  211 S-GVVSIYSSPPKPTYIATGSYDECIRVLDT  240 (339)
T ss_pred             c-ceEEEecCCCCCceEEEeccccceeeeeh
Confidence            8 89999999988899999999999999999

>KOG2321|consensus

Probab=98.64  E-value=5.5e-07  Score=77.62  Aligned_cols=102  Identities=14%  Similarity=0.091  Sum_probs=73.6

Q ss_pred             EEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee-eeecccCc--
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY-LSEKAHKA--   79 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~-~~~~~h~~--   79 (174)
                      .++....|.=.+|.+|..+..+.. ..++++|..++..   ..|++|+.||.|..||.|..+.+..... .....|..  
T Consensus       150 ~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~h---gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~  226 (703)
T KOG2321|consen  150 LVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEH---GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGD  226 (703)
T ss_pred             EeecCcceEEEEccccccccccccccccceeeeecCcc---ceEEecccCceEEEecchhhhhheeeecccccCCCcccc
Confidence            344445677778888876554433 4779999999863   6778889999999999998764322211 11123333  


Q ss_pred             --CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 --TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 --~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                        ..|.+++|+- ++-.+|.|..+|.|.|||+
T Consensus       227 ~~~svTal~F~d-~gL~~aVGts~G~v~iyDL  257 (703)
T KOG2321|consen  227 AAPSVTALKFRD-DGLHVAVGTSTGSVLIYDL  257 (703)
T ss_pred             ccCcceEEEecC-CceeEEeeccCCcEEEEEc
Confidence              1499999997 4778999999999999999

>KOG0650|consensus

Probab=98.63  E-value=1e-07  Score=82.41  Aligned_cols=103  Identities=17%  Similarity=0.261  Sum_probs=76.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEE--EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc----cceeeeeec
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW--ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE----KGFAYLSEK   75 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~--~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~----~~~~~~~~~   75 (174)
                      |+.|+.|+.+..+|+.-....+  ...|...|++|+|++.   -..+++|+.||++.|+--+-.+.+    --+.+..+.
T Consensus       622 li~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~r---yPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~  698 (733)
T KOG0650|consen  622 LILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKR---YPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLR  698 (733)
T ss_pred             EEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccc---cceeeeecCCCcEEEEeeeeehhhhcCCceEeeeecc
Confidence            6789999999999997553322  2346788999999986   478999999999999874422110    012345667


Q ss_pred             ccCcC---cEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          76 AHKAT---TVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        76 ~h~~~---~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      +|...   .|..+.|||.. ..|.|++.||+|+||.
T Consensus       699 gH~~~~~~gVLd~~wHP~q-pWLfsAGAd~tirlfT  733 (733)
T KOG0650|consen  699 GHEKTNDLGVLDTIWHPRQ-PWLFSAGADGTIRLFT  733 (733)
T ss_pred             CceeecccceEeecccCCC-ceEEecCCCceEEeeC
Confidence            88651   38899999964 5788899999999993

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.62  E-value=9.1e-07  Score=75.41  Aligned_cols=93  Identities=12%  Similarity=0.161  Sum_probs=60.4

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      ..|.+||+++++..........+.+.+|+|++   +.|+ +.+.++...||.+.....    ....+..+.. ...+..|
T Consensus       220 ~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG---~~la~~~~~~g~~~Iy~~d~~~~----~~~~lt~~~~-~~~~~~w  291 (427)
T PRK02889        220 PVVYVHDLATGRRRVVANFKGSNSAPAWSPDG---RTLAVALSRDGNSQIYTVNADGS----GLRRLTQSSG-IDTEPFF  291 (427)
T ss_pred             cEEEEEECCCCCEEEeecCCCCccceEECCCC---CEEEEEEccCCCceEEEEECCCC----CcEECCCCCC-CCcCeEE
Confidence            45999999998765443344556789999975   7776 578888877776543110    0122233444 4567889


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|++..++.++..+|...||.+
T Consensus       292 SpDG~~l~f~s~~~g~~~Iy~~  313 (427)
T PRK02889        292 SPDGRSIYFTSDRGGAPQIYRM  313 (427)
T ss_pred             cCCCCEEEEEecCCCCcEEEEE
Confidence            9965545445555678888877

>KOG1538|consensus

Probab=98.62  E-value=1.9e-07  Score=81.88  Aligned_cols=69  Identities=19%  Similarity=0.340  Sum_probs=57.6

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|+.|+|-|++   ..|+.+. +..+.|||...+.     ++.++++|.+ .|++|+|+. ++..||||+.|..|-+|.-
T Consensus        14 ci~d~afkPDG---sqL~lAA-g~rlliyD~ndG~-----llqtLKgHKD-tVycVAys~-dGkrFASG~aDK~VI~W~~   82 (1081)
T KOG1538|consen   14 CINDIAFKPDG---TQLILAA-GSRLLVYDTSDGT-----LLQPLKGHKD-TVYCVAYAK-DGKRFASGSADKSVIIWTS   82 (1081)
T ss_pred             chheeEECCCC---ceEEEec-CCEEEEEeCCCcc-----cccccccccc-eEEEEEEcc-CCceeccCCCceeEEEecc
Confidence            68999999986   5555443 3568899998865     3567789999 999999999 5779999999999999987

>KOG3881|consensus

Probab=98.60  E-value=4.9e-07  Score=74.63  Aligned_cols=101  Identities=12%  Similarity=0.189  Sum_probs=81.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEE-Eee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW-ETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~-~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++..-+.|++||.+.+.... .+. ....|.++...|.   ++.|.+|..-+.+..||+|+.....    ..+.+-.+
T Consensus       219 fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~---gn~Iy~gn~~g~l~~FD~r~~kl~g----~~~kg~tG  291 (412)
T KOG3881|consen  219 FATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPS---GNFIYTGNTKGQLAKFDLRGGKLLG----CGLKGITG  291 (412)
T ss_pred             EEEEecceeEEEecCcccCcceeEeccccCcceeeeecCC---CcEEEEecccchhheecccCceeec----cccCCccC
Confidence            7899999999999999776432 333 3577999999996   4899999999999999999865321    12345667


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                       .|.+|..|| ...++|+||-|..|+|+|+++
T Consensus       292 -sirsih~hp-~~~~las~GLDRyvRIhD~kt  321 (412)
T KOG3881|consen  292 -SIRSIHCHP-THPVLASCGLDRYVRIHDIKT  321 (412)
T ss_pred             -CcceEEEcC-CCceEEeeccceeEEEeeccc
Confidence             999999999 567999999999999999954

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.60  E-value=1.3e-06  Score=74.57  Aligned_cols=91  Identities=13%  Similarity=0.238  Sum_probs=58.7

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCC--cEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEA--KLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ..|.+||+.+++............+.+|+|++   +.|+ +.+.++  .|.+||+.+++..      .+..+.. ....+
T Consensus       228 ~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG---~~l~~~~s~~g~~~Iy~~d~~~g~~~------~lt~~~~-~~~~~  297 (433)
T PRK04922        228 SAIYVQDLATGQRELVASFRGINGAPSFSPDG---RRLALTLSRDGNPEIYVMDLGSRQLT------RLTNHFG-IDTEP  297 (433)
T ss_pred             cEEEEEECCCCCEEEeccCCCCccCceECCCC---CEEEEEEeCCCCceEEEEECCCCCeE------ECccCCC-Cccce
Confidence            46999999988765443334445578999975   6664 556665  5999999876422      2234444 45678


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|+|++..++.+...+|...||.+
T Consensus       298 ~~spDG~~l~f~sd~~g~~~iy~~  321 (433)
T PRK04922        298 TWAPDGKSIYFTSDRGGRPQIYRV  321 (433)
T ss_pred             EECCCCCEEEEEECCCCCceEEEE
Confidence            999965545444445666555544

>KOG1963|consensus

Probab=98.59  E-value=5.9e-07  Score=80.14  Aligned_cols=97  Identities=13%  Similarity=0.169  Sum_probs=70.8

Q ss_pred             cCCcEEEEECCCCCeEE-----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           7 DNGDLKMFDLKTMSLKW-----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~-----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      .+-.+.+|+..+.....     ...|.-.++++++||.+   +.+|+|..||.|.+|.--..+ ...+..+.+..|.. +
T Consensus       179 ~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~---~~~Aa~d~dGrI~vw~d~~~~-~~~~t~t~lHWH~~-~  253 (792)
T KOG1963|consen  179 HMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNE---RYLAAGDSDGRILVWRDFGSS-DDSETCTLLHWHHD-E  253 (792)
T ss_pred             EeeeEEEEEecccceeeccchhhhhhcccceeEEecccc---ceEEEeccCCcEEEEeccccc-cccccceEEEeccc-c
Confidence            34567788877644111     12244447899999974   899999999999999633311 11233455678988 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.+++|+++ +..|.|||.+|.+-+|.+
T Consensus       254 V~~L~fS~~-G~~LlSGG~E~VLv~Wq~  280 (792)
T KOG1963|consen  254 VNSLSFSSD-GAYLLSGGREGVLVLWQL  280 (792)
T ss_pred             cceeEEecC-CceEeecccceEEEEEee
Confidence            999999995 568899999999999999

>KOG1240|consensus

Probab=98.59  E-value=1.6e-06  Score=80.16  Aligned_cols=104  Identities=19%  Similarity=0.319  Sum_probs=70.9

Q ss_pred             CEEEEecCCcEEEEECCCCC-------eEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-------LKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE------   66 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-------~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~------   66 (174)
                      +++|||+||+||+||++.-.       ...+.. ....+..+.+-+.   ++.+|.++.||.|++.++...+..      
T Consensus      1063 ~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~---~~~~Av~t~DG~v~~~~id~~~~~~~~~~~ 1139 (1431)
T KOG1240|consen 1063 LFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN---GDQFAVSTKDGSVRVLRIDHYNVSKRVATQ 1139 (1431)
T ss_pred             eEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC---CCeEEEEcCCCeEEEEEccccccccceeee
Confidence            47999999999999987421       111222 3456777776664   488999999999999998752100      


Q ss_pred             ---------------ccee---------eee------------------e--cccCcCcEEEEEEcCCCCCEEEEEcCCC
Q psy6415          67 ---------------KGFA---------YLS------------------E--KAHKATTVWAAKHLPQNRDLFVTCGGSG  102 (174)
Q Consensus        67 ---------------~~~~---------~~~------------------~--~~h~~~~i~~v~fsP~~~~~las~s~Dg  102 (174)
                                     +.+.         ..+                  +  .-..+ .|.+++.+| .++++++|..-|
T Consensus      1140 ~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG-~vTSi~idp-~~~WlviGts~G 1217 (1431)
T KOG1240|consen 1140 VRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHG-LVTSIVIDP-WCNWLVIGTSRG 1217 (1431)
T ss_pred             eecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccc-ceeEEEecC-CceEEEEecCCc
Confidence                           0000         000                  0  01123 789999999 567999999999


Q ss_pred             cEEEEec
Q psy6415         103 SLNLWQL  109 (174)
Q Consensus       103 ~V~lWd~  109 (174)
                      .+-+||+
T Consensus      1218 ~l~lWDL 1224 (1431)
T KOG1240|consen 1218 QLVLWDL 1224 (1431)
T ss_pred             eEEEEEe
Confidence            9999999

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.58  E-value=1.1e-06  Score=75.09  Aligned_cols=92  Identities=14%  Similarity=0.218  Sum_probs=59.9

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEE-eCCC--cEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVAT-TLEA--KLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~-s~Dg--~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +..|.+||+++++..........+.+++|+|++   ..|+.. +.++  .|.+||+++.+..      .+..+.. .+..
T Consensus       222 ~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG---~~La~~~~~~g~~~I~~~d~~tg~~~------~lt~~~~-~~~~  291 (429)
T PRK03629        222 RSALVIQTLANGAVRQVASFPRHNGAPAFSPDG---SKLAFALSKTGSLNLYVMDLASGQIR------QVTDGRS-NNTE  291 (429)
T ss_pred             CcEEEEEECCCCCeEEccCCCCCcCCeEECCCC---CEEEEEEcCCCCcEEEEEECCCCCEE------EccCCCC-CcCc
Confidence            457999999988765443344456678999975   777644 5555  5889999876432      1223334 5678


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..|+|++..++.+...+|..+||.+
T Consensus       292 ~~wSPDG~~I~f~s~~~g~~~Iy~~  316 (429)
T PRK03629        292 PTWFPDSQNLAYTSDQAGRPQVYKV  316 (429)
T ss_pred             eEECCCCCEEEEEeCCCCCceEEEE
Confidence            9999965544444444566677755

>KOG1523|consensus

Probab=98.58  E-value=7.5e-07  Score=72.08  Aligned_cols=100  Identities=14%  Similarity=0.240  Sum_probs=76.8

Q ss_pred             EEEEecCCcEEEEECCCCCe---EEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc-ccccceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSL---KWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL-HREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~---~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~-~~~~~~~~~~~~~   76 (174)
                      +|.+-....|.|+.....++   ..++ .|...|+.|+|+|..   +.|++++.|..-.+|..... +-..   ...+..
T Consensus        25 iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~s---nrIvtcs~drnayVw~~~~~~~Wkp---tlvLlR   98 (361)
T KOG1523|consen   25 IAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKS---NRIVTCSHDRNAYVWTQPSGGTWKP---TLVLLR   98 (361)
T ss_pred             EEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCC---CceeEccCCCCccccccCCCCeecc---ceeEEE
Confidence            66777777888888776652   2222 356779999999974   89999999999999998532 2111   123346


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++. .+.+|.|+| .++.||.||+-..|.+|-+
T Consensus        99 iNr-AAt~V~WsP-~enkFAVgSgar~isVcy~  129 (361)
T KOG1523|consen   99 INR-AATCVKWSP-KENKFAVGSGARLISVCYY  129 (361)
T ss_pred             ecc-ceeeEeecC-cCceEEeccCccEEEEEEE
Confidence            777 899999999 6789999999999999999

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.57  E-value=2.1e-06  Score=72.27  Aligned_cols=91  Identities=20%  Similarity=0.242  Sum_probs=61.7

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ..|.++|..+........+...+.+.+|+|++   +.|+.++.+   ..|++||++++...      .+..+.. .+.++
T Consensus       170 ~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg---~~la~~~~~~~~~~i~v~d~~~g~~~------~~~~~~~-~~~~~  239 (417)
T TIGR02800       170 YELQVADYDGANPQTITRSREPILSPAWSPDG---QKLAYVSFESGKPEIYVQDLATGQRE------KVASFPG-MNGAP  239 (417)
T ss_pred             ceEEEEcCCCCCCEEeecCCCceecccCCCCC---CEEEEEEcCCCCcEEEEEECCCCCEE------EeecCCC-Cccce
Confidence            35788888755554444455568899999975   888876543   47999999875421      1223444 56778


Q ss_pred             EEcCCCCCEEEEEcCCC--cEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSG--SLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg--~V~lWd~  109 (174)
                      +|+|++..++++.+.++  .|.+||+
T Consensus       240 ~~spDg~~l~~~~~~~~~~~i~~~d~  265 (417)
T TIGR02800       240 AFSPDGSKLAVSLSKDGNPDIYVMDL  265 (417)
T ss_pred             EECCCCCEEEEEECCCCCccEEEEEC
Confidence            99997655666666665  4777887

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.57  E-value=2.8e-06  Score=71.36  Aligned_cols=99  Identities=15%  Similarity=0.149  Sum_probs=71.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCE-EEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGV-CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V-~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++-..+|.|.+.|..+.+.+........+ ..+.|+|++   .++.+++.||.|.++|+.+.+.+.     +++...  
T Consensus         9 ~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dg---r~~yv~~rdg~vsviD~~~~~~v~-----~i~~G~--   78 (369)
T PF02239_consen    9 YVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDG---RYLYVANRDGTVSVIDLATGKVVA-----TIKVGG--   78 (369)
T ss_dssp             EEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-S---SEEEEEETTSEEEEEETTSSSEEE-----EEE-SS--
T ss_pred             EEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCC---CEEEEEcCCCeEEEEECCcccEEE-----EEecCC--
Confidence            355667899999999999888776654555 457899974   888888999999999999976443     333322  


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      .-..+++||++..+++++-.++.|.++|.+
T Consensus        79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~  108 (369)
T PF02239_consen   79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAE  108 (369)
T ss_dssp             EEEEEEE--TTTEEEEEEEETTEEEEEETT
T ss_pred             CcceEEEcCCCCEEEEEecCCCceeEeccc
Confidence            457899999776677777789999999983

...

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.54  E-value=3.2e-07  Score=51.57  Aligned_cols=32  Identities=13%  Similarity=0.233  Sum_probs=28.7

Q ss_pred             eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEE
Q psy6415          25 TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFD   59 (174)
Q Consensus        25 ~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD   59 (174)
                      ..|...|++|+|+|+   ++.|++++.|++|+|||
T Consensus         8 ~~h~~~i~~i~~~~~---~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    8 RGHSSSINSIAWSPD---GNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             ESSSSSEEEEEEETT---SSEEEEEETTSEEEEEE
T ss_pred             cCCCCcEEEEEEecc---cccceeeCCCCEEEEEC
Confidence            346789999999997   48999999999999998

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG4497|consensus

Probab=98.53  E-value=2.3e-07  Score=75.48  Aligned_cols=153  Identities=16%  Similarity=0.159  Sum_probs=99.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      ||+.+.- .+-|=|..+-++.+.+..-+.|.-|.|..+.  ..+|.....|+.|.+|++...+--     -.+...+. +
T Consensus        23 iAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads--~~ilC~~yk~~~vqvwsl~Qpew~-----ckIdeg~a-g   93 (447)
T KOG4497|consen   23 IASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADS--CHILCVAYKDPKVQVWSLVQPEWY-----CKIDEGQA-G   93 (447)
T ss_pred             eeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccc--eeeeeeeeccceEEEEEeecceeE-----EEeccCCC-c
Confidence            5666554 5666666665543332223556677887753  355667899999999999876421     12334456 8


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCC---cccCCCCCcccccccc---------
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQR---TKPDIDDIPMGVPGSL---------  149 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dg~~~~~~~~~---------  149 (174)
                      +.+++|||+++.+|.+...|-+|.+|.+-+          .-.+...||..-   ..+..||....+..+.         
T Consensus        94 ls~~~WSPdgrhiL~tseF~lriTVWSL~t----------~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~  163 (447)
T KOG4497|consen   94 LSSISWSPDGRHILLTSEFDLRITVWSLNT----------QKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQIS  163 (447)
T ss_pred             ceeeeECCCcceEeeeecceeEEEEEEecc----------ceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHH
Confidence            999999998878999999999999999922          111222222111   1123456555443221         


Q ss_pred             -----ceeeeeeccccceeeeeeCCCCCC
Q psy6415         150 -----TLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       150 -----~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                           +|+.++..-+.....|.|||||.-
T Consensus       164 ~c~~W~ll~~f~~dT~DltgieWsPdg~~  192 (447)
T KOG4497|consen  164 SCKAWILLKEFKLDTIDLTGIEWSPDGNW  192 (447)
T ss_pred             hhHHHHHHHhcCCCcccccCceECCCCcE
Confidence                 678888888888999999999853

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.51  E-value=2.5e-06  Score=72.48  Aligned_cols=90  Identities=16%  Similarity=0.191  Sum_probs=59.9

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .|.++|.+++.......+...+.+.+|+|++   +.|+..+.+   ..|.+||+.+++...      +....+ .+...+
T Consensus       180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG---~~la~~s~~~~~~~l~~~~l~~g~~~~------l~~~~g-~~~~~~  249 (430)
T PRK00178        180 TLQRSDYDGARAVTLLQSREPILSPRWSPDG---KRIAYVSFEQKRPRIFVQNLDTGRREQ------ITNFEG-LNGAPA  249 (430)
T ss_pred             EEEEECCCCCCceEEecCCCceeeeeECCCC---CEEEEEEcCCCCCEEEEEECCCCCEEE------ccCCCC-CcCCeE
Confidence            4778888876654444556678999999974   888776543   369999998764321      112223 445689


Q ss_pred             EcCCCCCEEEEEcCCC--cEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSG--SLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg--~V~lWd~  109 (174)
                      |+|++..++.+.+.+|  .|.+||+
T Consensus       250 ~SpDG~~la~~~~~~g~~~Iy~~d~  274 (430)
T PRK00178        250 WSPDGSKLAFVLSKDGNPEIYVMDL  274 (430)
T ss_pred             ECCCCCEEEEEEccCCCceEEEEEC
Confidence            9996655555666666  5777787

>KOG0309|consensus

Probab=98.47  E-value=2.3e-07  Score=82.04  Aligned_cols=106  Identities=16%  Similarity=0.297  Sum_probs=79.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE-Eee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW-ETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~-~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +||+++.|-.|..||+|+-.... ... -..+-.-|.|+-.+  ++.| +.+-.+.|++||+|.+..    .+.++++|-
T Consensus       129 Vlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~--p~vl-asshg~~i~vwd~r~gs~----pl~s~K~~v  201 (1081)
T KOG0309|consen  129 VLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKD--PNVL-ASSHGNDIFVWDLRKGST----PLCSLKGHV  201 (1081)
T ss_pred             ceeeccccccceeeeccCCCcceeeeecccccCceeeecccC--cchh-hhccCCceEEEeccCCCc----ceEEecccc
Confidence            48999999999999999865432 211 13445567888653  3444 455667899999998642    355677888


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR  114 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~  114 (174)
                      . .|++++|+..-...+.+++.||+|+.||.+.+..
T Consensus       202 s-~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~  236 (1081)
T KOG0309|consen  202 S-SVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT  236 (1081)
T ss_pred             e-eeehHHHhhhhhhhhcccCCCCceeeeccccccc
Confidence            8 9999999987777889999999999999976544

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.47  E-value=4.6e-06  Score=72.12  Aligned_cols=86  Identities=14%  Similarity=0.173  Sum_probs=63.7

Q ss_pred             EEEECCCCCeEE----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415          12 KMFDLKTMSLKW----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus        12 klWDl~~~~~~~----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      .+|++..+++..    ....+..|.+.+++|+.   .+|+.|..||+|.+||.+.+...       .....- ....++|
T Consensus       239 ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E---~kLvlGC~DgSiiLyD~~~~~t~-------~~ka~~-~P~~iaW  307 (545)
T PF11768_consen  239 CIYECSRNKLQRVSVTSIPLPSQVICCARSPSE---DKLVLGCEDGSIILYDTTRGVTL-------LAKAEF-IPTLIAW  307 (545)
T ss_pred             EEEEeecCceeEEEEEEEecCCcceEEecCccc---ceEEEEecCCeEEEEEcCCCeee-------eeeecc-cceEEEE
Confidence            456665554332    23456789999999974   89999999999999998774211       111222 4578999


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      || ++.+|+.|+.-|.+.+||+
T Consensus       308 Hp-~gai~~V~s~qGelQ~FD~  328 (545)
T PF11768_consen  308 HP-DGAIFVVGSEQGELQCFDM  328 (545)
T ss_pred             cC-CCcEEEEEcCCceEEEEEe
Confidence            99 5679999999999999999

>KOG3881|consensus

Probab=98.45  E-value=2.3e-06  Score=70.73  Aligned_cols=101  Identities=19%  Similarity=0.303  Sum_probs=75.8

Q ss_pred             EEEEecC--CcEEEEECCCCCeEEEe-ecC---------CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415           2 VVAGYDN--GDLKMFDLKTMSLKWET-NLK---------NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF   69 (174)
Q Consensus         2 lasgs~D--g~iklWDl~~~~~~~~~-~~~---------~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~   69 (174)
                      +|+|+..  ..++|||+.+.+.++.. +.+         -.++++.|-+.. +.+.||+++.-+.+|+||.+.+..    
T Consensus       164 va~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~-~~~~fat~T~~hqvR~YDt~~qRR----  238 (412)
T KOG3881|consen  164 VATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGS-PNYKFATITRYHQVRLYDTRHQRR----  238 (412)
T ss_pred             EecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCC-CCceEEEEecceeEEEecCcccCc----
Confidence            6778888  88999999988666542 111         225678887642 347899999999999999996431    


Q ss_pred             eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++..+.--+. +|.++..-| +++.+.+|..-|.+..+|+
T Consensus       239 PV~~fd~~E~-~is~~~l~p-~gn~Iy~gn~~g~l~~FD~  276 (412)
T KOG3881|consen  239 PVAQFDFLEN-PISSTGLTP-SGNFIYTGNTKGQLAKFDL  276 (412)
T ss_pred             ceeEeccccC-cceeeeecC-CCcEEEEecccchhheecc
Confidence            2223333355 899999999 5678899999999999999

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.43  E-value=7.1e-06  Score=68.99  Aligned_cols=91  Identities=14%  Similarity=0.161  Sum_probs=57.6

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCC--cEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEA--KLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ..|++||+.+++......+...+.+++|+|++   +.|+ +.+.++  .|.+||+.+....      .+..+.. .....
T Consensus       214 ~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg---~~l~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~-~~~~~  283 (417)
T TIGR02800       214 PEIYVQDLATGQREKVASFPGMNGAPAFSPDG---SKLAVSLSKDGNPDIYVMDLDGKQLT------RLTNGPG-IDTEP  283 (417)
T ss_pred             cEEEEEECCCCCEEEeecCCCCccceEECCCC---CEEEEEECCCCCccEEEEECCCCCEE------ECCCCCC-CCCCE
Confidence            57999999988765444445567778999974   6665 455544  5888998875421      2223333 44567


Q ss_pred             EEcCCCCCEEEEEcCCCc--EEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGS--LNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~--V~lWd~  109 (174)
                      +|+|++..++.+...++.  |.+||+
T Consensus       284 ~~s~dg~~l~~~s~~~g~~~iy~~d~  309 (417)
T TIGR02800       284 SWSPDGKSIAFTSDRGGSPQIYMMDA  309 (417)
T ss_pred             EECCCCCEEEEEECCCCCceEEEEEC
Confidence            899965544444444554  555565

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2695|consensus

Probab=98.43  E-value=1.5e-06  Score=71.14  Aligned_cols=104  Identities=18%  Similarity=0.281  Sum_probs=73.2

Q ss_pred             CEEEEecCCcEEEEECCCC-----CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           1 MVVAGYDNGDLKMFDLKTM-----SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~-----~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      +|..|..+|.|-..|+|..     .+.+.+.|...|+++..=..  +++.|++.+.+|+|++||+|-.++-..  +.+.+
T Consensus       266 Lv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~--s~q~LmaS~M~gkikLyD~R~~K~~~~--V~qYe  341 (425)
T KOG2695|consen  266 LVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQF--SQQKLMASDMTGKIKLYDLRATKCKKS--VMQYE  341 (425)
T ss_pred             eeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhcc--ccceEeeccCcCceeEeeehhhhcccc--eeeee
Confidence            4678999999999999865     24555678888888764332  147899999999999999998766222  22334


Q ss_pred             ccCcCcEE--EEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          76 AHKATTVW--AAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        76 ~h~~~~i~--~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      +|-+ .--  -+..+|..+ .++++|.|-..+||.+.
T Consensus       342 GHvN-~~a~l~~~v~~eeg-~I~s~GdDcytRiWsl~  376 (425)
T KOG2695|consen  342 GHVN-LSAYLPAHVKEEEG-SIFSVGDDCYTRIWSLD  376 (425)
T ss_pred             cccc-cccccccccccccc-eEEEccCeeEEEEEecc
Confidence            6644 211  223345344 66779999999999993

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.43  E-value=3.8e-06  Score=72.16  Aligned_cols=90  Identities=17%  Similarity=0.193  Sum_probs=58.1

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeC-CC--cEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTL-EA--KLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~-Dg--~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .|.++|..+............+.+.+|+|++   +.|+..+. ++  .|.+||+.+++..   .+...   .. .....+
T Consensus       199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG---~~La~~s~~~g~~~L~~~dl~tg~~~---~lt~~---~g-~~~~~~  268 (448)
T PRK04792        199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDG---RKLAYVSFENRKAEIFVQDIYTQVRE---KVTSF---PG-INGAPR  268 (448)
T ss_pred             EEEEEeCCCCCceEeecCCCcccCceECCCC---CEEEEEEecCCCcEEEEEECCCCCeE---EecCC---CC-CcCCee
Confidence            5677788766544444456678899999975   78876653 33  5889999875421   11111   22 334679


Q ss_pred             EcCCCCCEEEEEcCCCc--EEEEec
Q psy6415          87 HLPQNRDLFVTCGGSGS--LNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~--V~lWd~  109 (174)
                      |+|++..++.+.+.+|.  |.+||+
T Consensus       269 wSPDG~~La~~~~~~g~~~Iy~~dl  293 (448)
T PRK04792        269 FSPDGKKLALVLSKDGQPEIYVVDI  293 (448)
T ss_pred             ECCCCCEEEEEEeCCCCeEEEEEEC
Confidence            99976656566777886  555666

>KOG2139|consensus

Probab=98.43  E-value=5.3e-06  Score=68.35  Aligned_cols=72  Identities=17%  Similarity=0.284  Sum_probs=54.4

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNL  106 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~l  106 (174)
                      +..|++++|++++   ..|+++| .|..|.|||..++....   +.  .-.-+ .+.-+.|||++ ..|.++.-|+..++
T Consensus       195 h~pVtsmqwn~dg---t~l~tAS~gsssi~iWdpdtg~~~p---L~--~~glg-g~slLkwSPdg-d~lfaAt~davfrl  264 (445)
T KOG2139|consen  195 HNPVTSMQWNEDG---TILVTASFGSSSIMIWDPDTGQKIP---LI--PKGLG-GFSLLKWSPDG-DVLFAATCDAVFRL  264 (445)
T ss_pred             CceeeEEEEcCCC---CEEeecccCcceEEEEcCCCCCccc---cc--ccCCC-ceeeEEEcCCC-CEEEEecccceeee
Confidence            4679999999974   7888887 67889999999875431   11  11223 68889999954 56666899999999


Q ss_pred             Eec
Q psy6415         107 WQL  109 (174)
Q Consensus       107 Wd~  109 (174)
                      |..
T Consensus       265 w~e  267 (445)
T KOG2139|consen  265 WQE  267 (445)
T ss_pred             ehh
Confidence            965

>KOG0771|consensus

Probab=98.42  E-value=6.3e-07  Score=74.35  Aligned_cols=70  Identities=23%  Similarity=0.366  Sum_probs=57.4

Q ss_pred             EEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          32 CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        32 ~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      ..|+|++++   ..|++++.||++|||+......+     ..+.+|.. +|.++.|+| ++.+||+-+.| ..++|++++
T Consensus       148 k~vaf~~~g---s~latgg~dg~lRv~~~Ps~~t~-----l~e~~~~~-eV~DL~FS~-dgk~lasig~d-~~~VW~~~~  216 (398)
T KOG0771|consen  148 KVVAFNGDG---SKLATGGTDGTLRVWEWPSMLTI-----LEEIAHHA-EVKDLDFSP-DGKFLASIGAD-SARVWSVNT  216 (398)
T ss_pred             eEEEEcCCC---CEeeeccccceEEEEecCcchhh-----hhhHhhcC-ccccceeCC-CCcEEEEecCC-ceEEEEecc
Confidence            468899864   89999999999999996654322     23357888 999999999 56799999999 899999977


Q ss_pred             c
Q psy6415         112 A  112 (174)
Q Consensus       112 ~  112 (174)
                      .
T Consensus       217 g  217 (398)
T KOG0771|consen  217 G  217 (398)
T ss_pred             C
Confidence            3

>KOG4532|consensus

Probab=98.33  E-value=2.2e-05  Score=62.65  Aligned_cols=99  Identities=7%  Similarity=0.027  Sum_probs=70.3

Q ss_pred             EEEecCCcEEEEECCCCCeEEEeecC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee-eecccCcC
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWETNLK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL-SEKAHKAT   80 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~~~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~-~~~~h~~~   80 (174)
                      .-++.|.++|+.++..+......... -.++++++++++   .++++.++...|-+|-+....   ++... ....-++ 
T Consensus       132 ~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~---~~~~~Vgds~~Vf~y~id~~s---ey~~~~~~a~t~D-  204 (344)
T KOG4532|consen  132 NIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDP---SWGSSVGDSRRVFRYAIDDES---EYIENIYEAPTSD-  204 (344)
T ss_pred             eeccCCcceeEEEEecCcccceeeccccceeeeEEcCCC---ceEEEecCCCcceEEEeCCcc---ceeeeeEecccCC-
Confidence            45778999999998766544332212 348899999874   788999999999999987643   12222 1122222 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .=.+.+|+.. ...||++..||++.|||+
T Consensus       205 ~gF~~S~s~~-~~~FAv~~Qdg~~~I~DV  232 (344)
T KOG4532|consen  205 HGFYNSFSEN-DLQFAVVFQDGTCAIYDV  232 (344)
T ss_pred             CceeeeeccC-cceEEEEecCCcEEEEEe
Confidence            4467889984 568999999999999999

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.32  E-value=1.6e-05  Score=68.34  Aligned_cols=90  Identities=17%  Similarity=0.227  Sum_probs=57.5

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCCc--EEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEAK--LFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~--I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .|.+||+.+++............+.+|+|++   +.|+ +.+.++.  |.++|+++++..      .+..+.. .....+
T Consensus       243 ~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG---~~La~~~~~~g~~~Iy~~dl~tg~~~------~lt~~~~-~~~~p~  312 (448)
T PRK04792        243 EIFVQDIYTQVREKVTSFPGINGAPRFSPDG---KKLALVLSKDGQPEIYVVDIATKALT------RITRHRA-IDTEPS  312 (448)
T ss_pred             EEEEEECCCCCeEEecCCCCCcCCeeECCCC---CEEEEEEeCCCCeEEEEEECCCCCeE------ECccCCC-CccceE
Confidence            5888899888764333333344578999975   6665 4566775  777788775421      2223444 567789


Q ss_pred             EcCCCCCEEEEEcCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |+|++..++.++..+|...||-+
T Consensus       313 wSpDG~~I~f~s~~~g~~~Iy~~  335 (448)
T PRK04792        313 WHPDGKSLIFTSERGGKPQIYRV  335 (448)
T ss_pred             ECCCCCEEEEEECCCCCceEEEE
Confidence            99976656566655666556544

>KOG1524|consensus

Probab=98.30  E-value=2.4e-06  Score=73.45  Aligned_cols=120  Identities=9%  Similarity=0.212  Sum_probs=80.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++.++.||.+.|-+-. ++.... ..|...|.+-.|+|++   .-|+|+++||.||||.-...      +-.++..... 
T Consensus        78 ~~i~s~DGkf~il~k~-~rVE~sv~AH~~A~~~gRW~~dG---tgLlt~GEDG~iKiWSrsGM------LRStl~Q~~~-  146 (737)
T KOG1524|consen   78 LLICSNDGRFVILNKS-ARVERSISAHAAAISSGRWSPDG---AGLLTAGEDGVIKIWSRSGM------LRSTVVQNEE-  146 (737)
T ss_pred             EEEEcCCceEEEeccc-chhhhhhhhhhhhhhhcccCCCC---ceeeeecCCceEEEEeccch------HHHHHhhcCc-
Confidence            5678889999887643 333322 3466778888999975   78999999999999985431      1112222233 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      +|++++|-|+...++.+.+.  .+.|=-+      .                              .+.+ +-....|..
T Consensus       147 ~v~c~~W~p~S~~vl~c~g~--h~~IKpL------~------------------------------~n~k-~i~WkAHDG  187 (737)
T KOG1524|consen  147 SIRCARWAPNSNSIVFCQGG--HISIKPL------A------------------------------ANSK-IIRWRAHDG  187 (737)
T ss_pred             eeEEEEECCCCCceEEecCC--eEEEeec------c------------------------------cccc-eeEEeccCc
Confidence            89999999987777665554  3433222      0                              0111 345678999


Q ss_pred             ceeeeeeCCCC
Q psy6415         161 PINSLDWSADK  171 (174)
Q Consensus       161 ~V~~l~~spd~  171 (174)
                      -|.+++|||..
T Consensus       188 iiL~~~W~~~s  198 (737)
T KOG1524|consen  188 LVLSLSWSTQS  198 (737)
T ss_pred             EEEEeecCccc
Confidence            99999999864

>KOG1240|consensus

Probab=98.24  E-value=5.4e-06  Score=76.80  Aligned_cols=91  Identities=16%  Similarity=0.205  Sum_probs=62.4

Q ss_pred             EECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc-ee-eeeecccCcCcEEEEEEcCC
Q psy6415          14 FDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG-FA-YLSEKAHKATTVWAAKHLPQ   90 (174)
Q Consensus        14 WDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~-~~-~~~~~~h~~~~i~~v~fsP~   90 (174)
                      |.++ |.++.+ ..|...|..++.++..  ...++|||.||+||+||.+.-.-..+ +. ..+...-.. .+..+.+-+ 
T Consensus      1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~--~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~s-r~~~vt~~~- 1108 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEH--TSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGS-RVEKVTMCG- 1108 (1431)
T ss_pred             CCcc-ceEeehhhhccccccceeecCCC--CceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCC-ceEEEEecc-
Confidence            6665 344433 4466778888888753  47899999999999999986431100 10 001111233 688888888 


Q ss_pred             CCCEEEEEcCCCcEEEEec
Q psy6415          91 NRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        91 ~~~~las~s~Dg~V~lWd~  109 (174)
                      +++.||.++.||.|.+.++
T Consensus      1109 ~~~~~Av~t~DG~v~~~~i 1127 (1431)
T KOG1240|consen 1109 NGDQFAVSTKDGSVRVLRI 1127 (1431)
T ss_pred             CCCeEEEEcCCCeEEEEEc
Confidence            5678999999999999999

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.22  E-value=7.7e-05  Score=62.68  Aligned_cols=104  Identities=14%  Similarity=0.143  Sum_probs=66.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEE-eCCCcEEEEECCCcccccceeeeeec--ccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVAT-TLEAKLFVFDLKTLHREKGFAYLSEK--AHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~-s~Dg~I~iWD~~~~~~~~~~~~~~~~--~h~   78 (174)
                      +..++.||.|.++|+.+++.+..........++++++++   ++++++ ..++++.|+|.++.+.++........  ...
T Consensus        51 ~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG---~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~  127 (369)
T PF02239_consen   51 LYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDG---KYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPE  127 (369)
T ss_dssp             EEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TT---TEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS-
T ss_pred             EEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCC---CEEEEEecCCCceeEeccccccceeecccccccccccC
Confidence            455678999999999999988777666778899999975   777654 58999999999998765433221111  122


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . .+..|-.+|..+..+++--.-+.|.+-|+
T Consensus       128 ~-Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy  157 (369)
T PF02239_consen  128 S-RVAAIVASPGRPEFVVNLKDTGEIWVVDY  157 (369)
T ss_dssp             ---EEEEEE-SSSSEEEEEETTTTEEEEEET
T ss_pred             C-CceeEEecCCCCEEEEEEccCCeEEEEEe
Confidence            3 56778788855444444455577766676

...

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.20  E-value=4.4e-05  Score=64.86  Aligned_cols=91  Identities=16%  Similarity=0.155  Sum_probs=58.0

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCC--cEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEA--KLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ..|.+||+.+++..........+...+|+|++   +.|+ +.+.++  .|.+||+++++..      .+..+.. .....
T Consensus       223 ~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG---~~la~~~~~~g~~~Iy~~d~~~~~~~------~lt~~~~-~~~~~  292 (430)
T PRK00178        223 PRIFVQNLDTGRREQITNFEGLNGAPAWSPDG---SKLAFVLSKDGNPEIYVMDLASRQLS------RVTNHPA-IDTEP  292 (430)
T ss_pred             CEEEEEECCCCCEEEccCCCCCcCCeEECCCC---CEEEEEEccCCCceEEEEECCCCCeE------EcccCCC-CcCCe
Confidence            36888999988765433333445578999975   7776 555555  5888899876421      2223444 45678


Q ss_pred             EEcCCCCCEEEEEcCCCc--EEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGS--LNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~--V~lWd~  109 (174)
                      .|+|++..++.+...+|.  |.++|+
T Consensus       293 ~~spDg~~i~f~s~~~g~~~iy~~d~  318 (430)
T PRK00178        293 FWGKDGRTLYFTSDRGGKPQIYKVNV  318 (430)
T ss_pred             EECCCCCEEEEEECCCCCceEEEEEC
Confidence            899976656555555555  555555

>KOG1963|consensus

Probab=98.20  E-value=1.7e-05  Score=71.11  Aligned_cols=98  Identities=16%  Similarity=0.183  Sum_probs=76.1

Q ss_pred             CEEEEecCCcEEEEECCC--C---CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           1 MVVAGYDNGDLKMFDLKT--M---SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~--~---~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      ++|+|..||.|.+|.=-.  +   .+....=|+..|++++|++++   .+|+||+..+.+-+|.+.+++  +.|+.    
T Consensus       219 ~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G---~~LlSGG~E~VLv~Wq~~T~~--kqfLP----  289 (792)
T KOG1963|consen  219 YLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDG---AYLLSGGREGVLVLWQLETGK--KQFLP----  289 (792)
T ss_pred             eEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCC---ceEeecccceEEEEEeecCCC--ccccc----
Confidence            489999999999995322  1   122112267899999999974   899999999999999999976  33432    


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .-.+ +|..+.+|| ++.+++...+|..|.+-..
T Consensus       290 RLgs-~I~~i~vS~-ds~~~sl~~~DNqI~li~~  321 (792)
T KOG1963|consen  290 RLGS-PILHIVVSP-DSDLYSLVLEDNQIHLIKA  321 (792)
T ss_pred             ccCC-eeEEEEEcC-CCCeEEEEecCceEEEEec
Confidence            2235 899999999 5678888999999999876

>KOG1334|consensus

Probab=98.16  E-value=5.4e-06  Score=70.41  Aligned_cols=105  Identities=16%  Similarity=0.194  Sum_probs=80.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      .|+|||+|.+|.+||+.+++....  ..|...|.--.|-|.. .-..|++++.||.|++=-+-....+.+  ...+..|.
T Consensus       156 ~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s-~d~ti~~~s~dgqvr~s~i~~t~~~e~--t~rl~~h~  232 (559)
T KOG1334|consen  156 VLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFS-GDRTIVTSSRDGQVRVSEILETGYVEN--TKRLAPHE  232 (559)
T ss_pred             eeeccCccceEEeehhhccCcccccccccccchhhhhccCCC-CCcCceeccccCceeeeeeccccceec--ceeccccc
Confidence            489999999999999988775543  3466666666677753 235699999999999877654332211  22345788


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      + +|+.++.-|+.+..|.|+|+|+.|.-.|+
T Consensus       233 g-~vhklav~p~sp~~f~S~geD~~v~~~Dl  262 (559)
T KOG1334|consen  233 G-PVHKLAVEPDSPKPFLSCGEDAVVFHIDL  262 (559)
T ss_pred             C-ccceeeecCCCCCcccccccccceeeeee
Confidence            8 99999999999999999999999999998

>KOG4547|consensus

Probab=98.12  E-value=3e-05  Score=66.91  Aligned_cols=100  Identities=10%  Similarity=0.099  Sum_probs=81.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|-|++.|+.|-.|+.+......... .+..+.++..+|++   ..|++||  ++|++||+++++.     +.++.+|.+
T Consensus       116 ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~---~~l~~as--~~ik~~~~~~kev-----v~~ftgh~s  185 (541)
T KOG4547|consen  116 CIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDG---KILLTAS--RQIKVLDIETKEV-----VITFTGHGS  185 (541)
T ss_pred             ceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCC---CEEEecc--ceEEEEEccCceE-----EEEecCCCc
Confidence            47789999999999999887765543 34568899999974   7888887  6799999999764     445679999


Q ss_pred             CcEEEEEEcCC-----CCCEEEEEcCCCcEEEEeccc
Q psy6415          80 TTVWAAKHLPQ-----NRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        80 ~~i~~v~fsP~-----~~~~las~s~Dg~V~lWd~~~  111 (174)
                       +|++++|--.     +..+|.++..+.-|.+|-++.
T Consensus       186 -~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  186 -PVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             -ceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence             9999999875     456888889999999999844

>KOG1064|consensus

Probab=98.11  E-value=3.7e-06  Score=80.39  Aligned_cols=84  Identities=20%  Similarity=0.402  Sum_probs=64.6

Q ss_pred             ecCCcEEEEECC--CCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415           6 YDNGDLKMFDLK--TMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus         6 s~Dg~iklWDl~--~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      ++++.+.+||..  ...-..+..|.++++.+++-|..   +.|++||.+|.|+|||+|..+.++.+           .. 
T Consensus      2312 ~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~---qllisggr~G~v~l~D~rqrql~h~~-----------~~- 2376 (2439)
T KOG1064|consen 2312 SDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKH---QLLISGGRKGEVCLFDIRQRQLRHTF-----------QA- 2376 (2439)
T ss_pred             CCCCcccchhcccCcccceeeeecCCCceEEEEcCcc---eEEEecCCcCcEEEeehHHHHHHHHh-----------hh-
Confidence            568999999953  23322336688999999999963   78899999999999999986544333           11 


Q ss_pred             EEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          84 AAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                         +.  .+.+|++|+..|.|+||++
T Consensus      2377 ---~~--~~~~f~~~ss~g~ikIw~~ 2397 (2439)
T KOG1064|consen 2377 ---LD--TREYFVTGSSEGNIKIWRL 2397 (2439)
T ss_pred             ---hh--hhheeeccCcccceEEEEc
Confidence               22  3468999999999999999

>KOG2139|consensus

Probab=98.10  E-value=7.3e-05  Score=61.77  Aligned_cols=93  Identities=18%  Similarity=0.205  Sum_probs=68.0

Q ss_pred             EecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-cccceeeeeecccCcCcE
Q psy6415           5 GYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REKGFAYLSEKAHKATTV   82 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~~~~~~~~~h~~~~i   82 (174)
                      ...|..|.|||..++..+... ....++.=+.|+|++   ++|.+++-|+..++|+..+.- +.+      ..--++ .|
T Consensus       214 S~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdg---d~lfaAt~davfrlw~e~q~wt~er------w~lgsg-rv  283 (445)
T KOG2139|consen  214 SFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDG---DVLFAATCDAVFRLWQENQSWTKER------WILGSG-RV  283 (445)
T ss_pred             ccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCC---CEEEEecccceeeeehhcccceecc------eeccCC-ce
Confidence            346889999999999876544 345778889999975   999999999999999755421 111      112234 68


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ....|+|.+..+|.+++..-  .||.+
T Consensus       284 qtacWspcGsfLLf~~sgsp--~lysl  308 (445)
T KOG2139|consen  284 QTACWSPCGSFLLFACSGSP--RLYSL  308 (445)
T ss_pred             eeeeecCCCCEEEEEEcCCc--eEEEE
Confidence            88889998888888887755  45555

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.04  E-value=9.9e-05  Score=63.13  Aligned_cols=94  Identities=15%  Similarity=0.062  Sum_probs=53.9

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeC-----CCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTL-----EAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~-----Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      .|.+.|+.+++..............+|+|++   +.||..+.     |-.+.+||+..........+  ...+.. ....
T Consensus       212 ~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG---~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~l--t~~~~~-~~~~  285 (428)
T PRK01029        212 KIFLGSLENPAGKKILALQGNQLMPTFSPRK---KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRL--LNEAFG-TQGN  285 (428)
T ss_pred             eEEEEECCCCCceEeecCCCCccceEECCCC---CEEEEEECCCCCcceeEEEeecccCCCCcceEe--ecCCCC-CcCC
Confidence            4666688877655444445556678999985   77775542     33455577765311000011  112222 3457


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+|+|++..++.++..+|..+||.+
T Consensus       286 p~wSPDG~~Laf~s~~~g~~~ly~~  310 (428)
T PRK01029        286 PSFSPDGTRLVFVSNKDGRPRIYIM  310 (428)
T ss_pred             eEECCCCCEEEEEECCCCCceEEEE
Confidence            7999965545555556787777766

>KOG2695|consensus

Probab=98.04  E-value=9.9e-06  Score=66.42  Aligned_cols=100  Identities=16%  Similarity=0.222  Sum_probs=72.3

Q ss_pred             EEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      +.+.+-.|-|-|+.||.... +..+..|.++.|...   .+.+..|...|.|-..|+|....-.+...+.+ -|.. .|.
T Consensus       229 s~G~sqqv~L~nvetg~~qs-f~sksDVfAlQf~~s---~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~S-svt  302 (425)
T KOG2695|consen  229 SVGLSQQVLLTNVETGHQQS-FQSKSDVFALQFAGS---DNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDS-SVT  302 (425)
T ss_pred             cccccceeEEEEeecccccc-cccchhHHHHHhccc---CCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCc-chh
Confidence            34456677777887765432 234677888999864   38889999999999999997532112222233 5777 888


Q ss_pred             EEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          84 AAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++...-++++.|.+.+.+|+|+|||+
T Consensus       303 slq~Lq~s~q~LmaS~M~gkikLyD~  328 (425)
T KOG2695|consen  303 SLQILQFSQQKLMASDMTGKIKLYDL  328 (425)
T ss_pred             hhhhhccccceEeeccCcCceeEeee
Confidence            88777656677888899999999999

>KOG1064|consensus

Probab=97.94  E-value=4.9e-05  Score=73.08  Aligned_cols=102  Identities=17%  Similarity=0.247  Sum_probs=74.7

Q ss_pred             EEEecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-----c----ccce--
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-----R----EKGF--   69 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-----~----~~~~--   69 (174)
                      +||+.||.|++|....++.+...  .....|..+.|+-.   |+.+..+..||.+.+|.+....     |    .+-|  
T Consensus      2224 ltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~q---Gnk~~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~F 2300 (2439)
T KOG1064|consen 2224 LTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQ---GNKFGIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRF 2300 (2439)
T ss_pred             EecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhccc---CCceeeeccCCceeecccCCcceeccccCCccccceee
Confidence            68999999999999877765443  23466888888865   4788888888888888876421     0    0000  


Q ss_pred             ---------------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          70 ---------------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ---------------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                                                 ......+|.+ .+..+++-| ..++|.|||.+|.|+|||+
T Consensus      2301 i~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~-gaT~l~~~P-~~qllisggr~G~v~l~D~ 2365 (2439)
T KOG1064|consen 2301 IGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDG-GATVLAYAP-KHQLLISGGRKGEVCLFDI 2365 (2439)
T ss_pred             eehhhhccccCCCCCcccchhcccCcccceeeeecCC-CceEEEEcC-cceEEEecCCcCcEEEeeh
Confidence                                       0001146777 899999999 5679999999999999999

>KOG4714|consensus

Probab=97.89  E-value=5.1e-05  Score=60.27  Aligned_cols=60  Identities=20%  Similarity=0.415  Sum_probs=50.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      ++++|++||.|-|||.|.......  ..|+..++-|-|+|..  +..|+++++||.+--||..+
T Consensus       194 ~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~--p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  194 LVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKN--PEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             EEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCC--chheeEecCCCcEEEEcCCC
Confidence            478999999999999998754322  3578889999999974  68899999999999999875

>smart00320 WD40 WD40 repeats

Probab=97.89  E-value=4.3e-05  Score=40.34  Aligned_cols=34  Identities=21%  Similarity=0.506  Sum_probs=29.1

Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      .+..|.. .|+++.|+|. ..++++++.|+.|++|+
T Consensus         7 ~~~~~~~-~i~~~~~~~~-~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        7 TLKGHTG-PVTSVAFSPD-GKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEecCC-ceeEEEECCC-CCEEEEecCCCeEEEcC
Confidence            3457778 9999999995 47899999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4497|consensus

Probab=97.88  E-value=0.0001  Score=60.33  Aligned_cols=89  Identities=12%  Similarity=0.242  Sum_probs=63.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |...+.|+.|.+|++.+-+-..... ...++.++.|+|++  .+.|.++.-|-.|.+|.+.++...   .+    .|...
T Consensus        64 lC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdg--rhiL~tseF~lriTVWSL~t~~~~---~~----~~pK~  134 (447)
T KOG4497|consen   64 LCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDG--RHILLTSEFDLRITVWSLNTQKGY---LL----PHPKT  134 (447)
T ss_pred             eeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCc--ceEeeeecceeEEEEEEeccceeE---Ee----ccccc
Confidence            5677899999999997654333332 45789999999985  366778889999999999986532   11    33322


Q ss_pred             cEEEEEEcCCCCCEEEEEcC
Q psy6415          81 TVWAAKHLPQNRDLFVTCGG  100 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~  100 (174)
                      .+-.++|+|+ ++..|-++.
T Consensus       135 ~~kg~~f~~d-g~f~ai~sR  153 (447)
T KOG4497|consen  135 NVKGYAFHPD-GQFCAILSR  153 (447)
T ss_pred             CceeEEECCC-Cceeeeeec
Confidence            5678899995 556565554

>KOG0309|consensus

Probab=97.88  E-value=4e-05  Score=68.30  Aligned_cols=114  Identities=13%  Similarity=0.317  Sum_probs=80.2

Q ss_pred             EEEEECCC---CCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeee-ecccCcCcEEEE
Q psy6415          11 LKMFDLKT---MSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLS-EKAHKATTVWAA   85 (174)
Q Consensus        11 iklWDl~~---~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~-~~~h~~~~i~~v   85 (174)
                      -.+|++-.   ..+.+. ..|..+|+.+-|+|..  ...|++++-|..+..||+|....    .... ...|+  ....|
T Consensus        93 aiiwnlA~ss~~aIef~lhghsraitd~n~~~q~--pdVlatcsvdt~vh~wd~rSp~~----p~ys~~~w~s--~asqV  164 (1081)
T KOG0309|consen   93 AIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQH--PDVLATCSVDTYVHAWDMRSPHR----PFYSTSSWRS--AASQV  164 (1081)
T ss_pred             hhhhhhhcCCccceEEEEecCccceeccccCCCC--CcceeeccccccceeeeccCCCc----ceeeeecccc--cCcee
Confidence            34777632   222222 3567889999999974  57899999999999999998642    1222 12343  35689


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeee
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSL  165 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l  165 (174)
                      +|+..++.++|+ +.-..|++||+                  .|         ++         ..+.++.+|...|+++
T Consensus       165 kwnyk~p~vlas-shg~~i~vwd~------------------r~---------gs---------~pl~s~K~~vs~vn~~  207 (1081)
T KOG0309|consen  165 KWNYKDPNVLAS-SHGNDIFVWDL------------------RK---------GS---------TPLCSLKGHVSSVNSI  207 (1081)
T ss_pred             eecccCcchhhh-ccCCceEEEec------------------cC---------CC---------cceEEecccceeeehH
Confidence            999999988885 55667999999                  11         11         2577888888888888


Q ss_pred             eeCC
Q psy6415         166 DWSA  169 (174)
Q Consensus       166 ~~sp  169 (174)
                      +|+.
T Consensus       208 ~fnr  211 (1081)
T KOG0309|consen  208 DFNR  211 (1081)
T ss_pred             HHhh
Confidence            8764

>KOG2315|consensus

Probab=97.84  E-value=0.00025  Score=61.23  Aligned_cols=94  Identities=17%  Similarity=0.286  Sum_probs=64.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe---CCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT---LEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s---~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ++-|..=.++.|+|++.. .++.+ ..+.-+.+-|||++   ++|+.++   .-|.|-|||+.+.+++.     .+.+- 
T Consensus       287 VvyGfMPAkvtifnlr~~-~v~df-~egpRN~~~fnp~g---~ii~lAGFGNL~G~mEvwDv~n~K~i~-----~~~a~-  355 (566)
T KOG2315|consen  287 VVYGFMPAKVTIFNLRGK-PVFDF-PEGPRNTAFFNPHG---NIILLAGFGNLPGDMEVWDVPNRKLIA-----KFKAA-  355 (566)
T ss_pred             EEEecccceEEEEcCCCC-EeEeC-CCCCccceEECCCC---CEEEEeecCCCCCceEEEeccchhhcc-----ccccC-
Confidence            456777778888888743 33332 23456788999985   8888775   56889999999865432     22232 


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcC------CCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGG------SGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~------Dg~V~lWd~  109 (174)
                        .-.-+.|+|+ +..|.||..      |..++||++
T Consensus       356 --~tt~~eW~Pd-Ge~flTATTaPRlrvdNg~Kiwhy  389 (566)
T KOG2315|consen  356 --NTTVFEWSPD-GEYFLTATTAPRLRVDNGIKIWHY  389 (566)
T ss_pred             --CceEEEEcCC-CcEEEEEeccccEEecCCeEEEEe
Confidence              2245689994 567777754      788999999

>PRK01029 tolB translocation protein TolB; Provisional

Probab=97.84  E-value=0.00026  Score=60.59  Aligned_cols=96  Identities=9%  Similarity=0.044  Sum_probs=50.9

Q ss_pred             CCcEEEEECCCC---CeEEEeecC-CCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           8 NGDLKMFDLKTM---SLKWETNLK-NGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         8 Dg~iklWDl~~~---~~~~~~~~~-~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      |-.+.+||+.++   ......... ....+.+|+|++   ..|+..+ .++..+||.+.-.... + ....+..+.. .+
T Consensus       256 di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG---~~Laf~s~~~g~~~ly~~~~~~~g-~-~~~~lt~~~~-~~  329 (428)
T PRK01029        256 DLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDG---TRLVFVSNKDGRPRIYIMQIDPEG-Q-SPRLLTKKYR-NS  329 (428)
T ss_pred             ceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCC---CEEEEEECCCCCceEEEEECcccc-c-ceEEeccCCC-Cc
Confidence            334555777653   222222222 234578999975   7777655 5776666654321000 0 0111223334 56


Q ss_pred             EEEEEcCCCCCEEEEEcCC--CcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGGS--GSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~D--g~V~lWd~  109 (174)
                      ...+|||++..++.++..+  ..|.+||+
T Consensus       330 ~~p~wSPDG~~Laf~~~~~g~~~I~v~dl  358 (428)
T PRK01029        330 SCPAWSPDGKKIAFCSVIKGVRQICVYDL  358 (428)
T ss_pred             cceeECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            7889999655443344333  36888888

>KOG1334|consensus

Probab=97.84  E-value=3.8e-05  Score=65.37  Aligned_cols=76  Identities=24%  Similarity=0.369  Sum_probs=61.1

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCC-CEEEEEcCCCcE
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNR-DLFVTCGGSGSL  104 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~-~~las~s~Dg~V  104 (174)
                      .|++.|+.|.|+..+   ..|++||.|..|-+||-........|    ..+|.. -|....|.|+.+ ..+++++.||.|
T Consensus       140 ~H~GcVntV~FN~~G---d~l~SgSDD~~vv~WdW~~~~~~l~f----~SGH~~-NvfQaKFiP~s~d~ti~~~s~dgqv  211 (559)
T KOG1334|consen  140 KHKGCVNTVHFNQRG---DVLASGSDDLQVVVWDWVSGSPKLSF----ESGHCN-NVFQAKFIPFSGDRTIVTSSRDGQV  211 (559)
T ss_pred             CCCCccceeeecccC---ceeeccCccceEEeehhhccCccccc----cccccc-chhhhhccCCCCCcCceeccccCce
Confidence            467889999999864   89999999999999998876543333    247877 788888999743 478999999999


Q ss_pred             EEEec
Q psy6415         105 NLWQL  109 (174)
Q Consensus       105 ~lWd~  109 (174)
                      ++=.+
T Consensus       212 r~s~i  216 (559)
T KOG1334|consen  212 RVSEI  216 (559)
T ss_pred             eeeee
Confidence            98665

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=97.82  E-value=0.00097  Score=55.30  Aligned_cols=100  Identities=17%  Similarity=0.202  Sum_probs=63.5

Q ss_pred             ecCCcEEEEECCCCC--eEE----EeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcc--cccceeeeeec-
Q psy6415           6 YDNGDLKMFDLKTMS--LKW----ETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLH--REKGFAYLSEK-   75 (174)
Q Consensus         6 s~Dg~iklWDl~~~~--~~~----~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~--~~~~~~~~~~~-   75 (174)
                      -....|.+|++....  +..    ......+-+.++|+|++   +++ ++.-.+++|.++++....  ........++. 
T Consensus       163 lG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg---~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~  239 (345)
T PF10282_consen  163 LGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDG---KYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE  239 (345)
T ss_dssp             TTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTS---SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET
T ss_pred             cCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCc---CEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc
Confidence            334578888887654  432    12234668899999974   554 667789999999998321  11000111111 


Q ss_pred             c--cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 A--HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~--h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .  ... ....|+++|++..++++....++|.+|++
T Consensus       240 ~~~~~~-~~~~i~ispdg~~lyvsnr~~~sI~vf~~  274 (345)
T PF10282_consen  240 GFTGEN-APAEIAISPDGRFLYVSNRGSNSISVFDL  274 (345)
T ss_dssp             TSCSSS-SEEEEEE-TTSSEEEEEECTTTEEEEEEE
T ss_pred             cccccC-CceeEEEecCCCEEEEEeccCCEEEEEEE
Confidence            1  112 46789999988888999999999999999

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2315|consensus

Probab=97.74  E-value=0.00086  Score=58.01  Aligned_cols=87  Identities=16%  Similarity=0.259  Sum_probs=60.5

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE--EEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL--VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l--~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      ++.+.++++..+.....-.+.|.++.|+|.+   ..+  +.|-.=.++.|+|+|..-      +..+  -++ +=+++-|
T Consensus       252 ~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~---~EF~VvyGfMPAkvtifnlr~~~------v~df--~eg-pRN~~~f  319 (566)
T KOG2315|consen  252 TLYLLATQGESVSVPLLKEGPVHDVTWSPSG---REFAVVYGFMPAKVTIFNLRGKP------VFDF--PEG-PRNTAFF  319 (566)
T ss_pred             eEEEEEecCceEEEecCCCCCceEEEECCCC---CEEEEEEecccceEEEEcCCCCE------eEeC--CCC-CccceEE
Confidence            5666666644454444446789999999975   444  446678899999998631      2222  234 6688999


Q ss_pred             cCCCCCEEEEEcC---CCcEEEEec
Q psy6415          88 LPQNRDLFVTCGG---SGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~---Dg~V~lWd~  109 (174)
                      ||++ .+++-||.   -|.|-+||+
T Consensus       320 np~g-~ii~lAGFGNL~G~mEvwDv  343 (566)
T KOG2315|consen  320 NPHG-NIILLAGFGNLPGDMEVWDV  343 (566)
T ss_pred             CCCC-CEEEEeecCCCCCceEEEec
Confidence            9965 56666665   589999999

>KOG1409|consensus

Probab=97.68  E-value=0.00013  Score=59.98  Aligned_cols=60  Identities=10%  Similarity=0.245  Sum_probs=45.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeE--EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK--WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL   63 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~--~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~   63 (174)
                      .|.+|+.|..|.+||+-...-+  ....|...|..+..-+.   -.+|.+++.||.|-+||++..
T Consensus       211 ~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~---t~~l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  211 LLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQH---TRQLISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             EEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhh---heeeeeccCCCeEEEEeccce
Confidence            4789999999999999654432  22345666777766554   267999999999999998753

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.67  E-value=0.00013  Score=59.55  Aligned_cols=75  Identities=15%  Similarity=0.353  Sum_probs=55.4

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC-----cCcEEEEEEcCCCCCEEEEEcCCC
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK-----ATTVWAAKHLPQNRDLFVTCGGSG  102 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~-----~~~i~~v~fsP~~~~~las~s~Dg  102 (174)
                      .--|++|+|+.+    .....+++|=.|.+|++.-..  +.|.+-.++.|.     . -|.+..|||..-.+|.-.+..|
T Consensus       172 ~yhiNSiS~NsD----~et~lSaDdLrINLWnl~i~D--~sFnIVDiKP~nmeeLte-VItSaeFhp~~cn~fmYSsSkG  244 (460)
T COG5170         172 PYHINSISFNSD----KETLLSADDLRINLWNLEIID--GSFNIVDIKPHNMEELTE-VITSAEFHPEMCNVFMYSSSKG  244 (460)
T ss_pred             eeEeeeeeecCc----hheeeeccceeeeeccccccC--CceEEEeccCccHHHHHH-HHhhcccCHhHcceEEEecCCC
Confidence            344789999976    344455678899999987543  234443444443     2 4789999998888999999999


Q ss_pred             cEEEEec
Q psy6415         103 SLNLWQL  109 (174)
Q Consensus       103 ~V~lWd~  109 (174)
                      +|+|-|+
T Consensus       245 ~Ikl~Dl  251 (460)
T COG5170         245 EIKLNDL  251 (460)
T ss_pred             cEEehhh
Confidence            9999999

>KOG1354|consensus

Probab=97.60  E-value=0.00018  Score=59.16  Aligned_cols=76  Identities=12%  Similarity=0.342  Sum_probs=55.3

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC-----cCcEEEEEEcCCCCCEEEEEcCC
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK-----ATTVWAAKHLPQNRDLFVTCGGS  101 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~-----~~~i~~v~fsP~~~~~las~s~D  101 (174)
                      |.--|+||+++.+.   ..++ +.+|=.|.||.+.-..  +.|.+-.++.++     . -|++..|||..-++|+-.|+.
T Consensus       163 HtyhiNSIS~NsD~---Et~l-SADdLRINLWnlei~d--~sFnIVDIKP~nmEeLte-VITsaEFhp~~cn~f~YSSSK  235 (433)
T KOG1354|consen  163 HTYHINSISVNSDK---ETFL-SADDLRINLWNLEIID--QSFNIVDIKPANMEELTE-VITSAEFHPHHCNVFVYSSSK  235 (433)
T ss_pred             ceeEeeeeeecCcc---ceEe-eccceeeeeccccccC--CceeEEEccccCHHHHHH-HHhhhccCHhHccEEEEecCC
Confidence            34458899999762   4444 4578889999987532  233333333332     3 478899999888899999999


Q ss_pred             CcEEEEec
Q psy6415         102 GSLNLWQL  109 (174)
Q Consensus       102 g~V~lWd~  109 (174)
                      |+|+|.|+
T Consensus       236 GtIrLcDm  243 (433)
T KOG1354|consen  236 GTIRLCDM  243 (433)
T ss_pred             CcEEEeec
Confidence            99999999

>KOG2066|consensus

Probab=97.53  E-value=0.00077  Score=60.56  Aligned_cols=102  Identities=12%  Similarity=0.135  Sum_probs=75.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCC--CCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRD--IPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~--~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ++||||+||+|.|--+-+.+.......+..+.+|+++|+-  .+..++++|+.-| +-++.-+-.....   ...+..-.
T Consensus        85 y~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~---~v~l~~~e  160 (846)
T KOG2066|consen   85 YVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD---SVVLSEGE  160 (846)
T ss_pred             eEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc---ceeeecCc
Confidence            4799999999999999888877777778899999999971  1234689999988 7676644221111   11223445


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      + +|.+|.|+   ++++|=++.+| |++||+.+
T Consensus       161 G-~I~~i~W~---g~lIAWand~G-v~vyd~~~  188 (846)
T KOG2066|consen  161 G-PIHSIKWR---GNLIAWANDDG-VKVYDTPT  188 (846)
T ss_pred             c-ceEEEEec---CcEEEEecCCC-cEEEeccc
Confidence            6 99999997   45888888777 99999965

>KOG1645|consensus

Probab=97.53  E-value=0.00023  Score=59.51  Aligned_cols=73  Identities=15%  Similarity=0.206  Sum_probs=60.1

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLW  107 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lW  107 (174)
                      ...|.+++|+|..  ...|..++.+++|+|.|+++..++..|     .+| . .+|+++|--++...+-.|-..|.|.+|
T Consensus       193 g~~IrdlafSp~~--~GLl~~asl~nkiki~dlet~~~vssy-----~a~-~-~~wSC~wDlde~h~IYaGl~nG~Vlvy  263 (463)
T KOG1645|consen  193 GSFIRDLAFSPFN--EGLLGLASLGNKIKIMDLETSCVVSSY-----IAY-N-QIWSCCWDLDERHVIYAGLQNGMVLVY  263 (463)
T ss_pred             chhhhhhccCccc--cceeeeeccCceEEEEecccceeeehe-----ecc-C-CceeeeeccCCcceeEEeccCceEEEE
Confidence            3558999999973  235788999999999999986544333     355 4 799999999888889999999999999


Q ss_pred             ec
Q psy6415         108 QL  109 (174)
Q Consensus       108 d~  109 (174)
                      |+
T Consensus       264 D~  265 (463)
T KOG1645|consen  264 DM  265 (463)
T ss_pred             Ec
Confidence            99

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.51  E-value=0.0055  Score=52.63  Aligned_cols=98  Identities=18%  Similarity=0.245  Sum_probs=75.1

Q ss_pred             EEEEecCC-cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNG-DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg-~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++.|-.|| .+-|+|.++++.......-+.|.+|..+|++   ..++.+-....|-+.|+.+++..    . ..+...+ 
T Consensus       374 ~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dG---K~~vvaNdr~el~vididngnv~----~-idkS~~~-  444 (668)
T COG4946         374 DVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDG---KKVVVANDRFELWVIDIDNGNVR----L-IDKSEYG-  444 (668)
T ss_pred             eEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCC---cEEEEEcCceEEEEEEecCCCee----E-ecccccc-
Confidence            46677888 8999999999876555555779999999974   78888888889999999987632    1 1123344 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCC----cEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSG----SLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg----~V~lWd~  109 (174)
                      -|....||| +...||-+=-+|    .|+|+|+
T Consensus       445 lItdf~~~~-nsr~iAYafP~gy~tq~Iklydm  476 (668)
T COG4946         445 LITDFDWHP-NSRWIAYAFPEGYYTQSIKLYDM  476 (668)
T ss_pred             eeEEEEEcC-CceeEEEecCcceeeeeEEEEec
Confidence            799999999 567888775555    6899999

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.51  E-value=0.004  Score=59.04  Aligned_cols=103  Identities=9%  Similarity=0.007  Sum_probs=65.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec---------------CCCEEEEEecCCCCCCC-EEEEEeCCCcEEEEECCCccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL---------------KNGVCGVDFDRRDIPMN-KLVATTLEAKLFVFDLKTLHR   65 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~---------------~~~V~sv~f~~~~~~~~-~l~s~s~Dg~I~iWD~~~~~~   65 (174)
                      .++.+.+++|++||..++........               -.....|+|+|++   + .+++-+.++.|++||+++...
T Consensus       698 yVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG---~~LYVADs~n~~Irv~D~~tg~~  774 (1057)
T PLN02919        698 YIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDL---KELYIADSESSSIRALDLKTGGS  774 (1057)
T ss_pred             EEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCC---CEEEEEECCCCeEEEEECCCCcE
Confidence            45667788999999987755321100               1234578999974   5 556777889999999986431


Q ss_pred             ccc------e--eeeeec--------ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          66 EKG------F--AYLSEK--------AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        66 ~~~------~--~~~~~~--------~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...      +  ....+-        ..-. .-..++|+|+ +.++++-+.+++|++||.
T Consensus       775 ~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~-~P~Gvavd~d-G~LYVADs~N~rIrviD~  832 (1057)
T PLN02919        775 RLLAGGDPTFSDNLFKFGDHDGVGSEVLLQ-HPLGVLCAKD-GQIYVADSYNHKIKKLDP  832 (1057)
T ss_pred             EEEEecccccCcccccccCCCCchhhhhcc-CCceeeEeCC-CcEEEEECCCCEEEEEEC
Confidence            100      0  000000        0001 1247889994 568999999999999999

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.49  E-value=0.01  Score=41.46  Aligned_cols=89  Identities=12%  Similarity=0.104  Sum_probs=61.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |+.|++|..||+|+=  ..++......+.|.++.-...    ..++.+-.+|+|.+||-...       +...+.. . .
T Consensus        18 LlvGs~D~~IRvf~~--~e~~~Ei~e~~~v~~L~~~~~----~~F~Y~l~NGTVGvY~~~~R-------lWRiKSK-~-~   82 (111)
T PF14783_consen   18 LLVGSDDFEIRVFKG--DEIVAEITETDKVTSLCSLGG----GRFAYALANGTVGVYDRSQR-------LWRIKSK-N-Q   82 (111)
T ss_pred             EEEecCCcEEEEEeC--CcEEEEEecccceEEEEEcCC----CEEEEEecCCEEEEEeCcce-------eeeeccC-C-C
Confidence            788999999999964  456666667788888877653    78999999999999986442       1222221 2 3


Q ss_pred             EEEEEEcCCC---CCEEEEEcCCCcEE
Q psy6415          82 VWAAKHLPQN---RDLFVTCGGSGSLN  105 (174)
Q Consensus        82 i~~v~fsP~~---~~~las~s~Dg~V~  105 (174)
                      +.++.+...+   -.-|++|=.+|.|-
T Consensus        83 ~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   83 VTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            5555554322   23578888888774

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.48  E-value=0.002  Score=60.95  Aligned_cols=104  Identities=18%  Similarity=0.115  Sum_probs=69.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-------------c---------CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEE
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-------------L---------KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFD   59 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-------------~---------~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD   59 (174)
                      .++-+.+++|++||++++.......             .         -..-.+|+|++++   +.+++-+.++.|++||
T Consensus       755 YVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG---~LYVADs~N~rIrviD  831 (1057)
T PLN02919        755 YIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDG---QIYVADSYNHKIKKLD  831 (1057)
T ss_pred             EEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCC---cEEEEECCCCEEEEEE
Confidence            3566678999999998765321110             0         0123578888864   7888889999999999


Q ss_pred             CCCcccccceeee---------eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          60 LKTLHREKGFAYL---------SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        60 ~~~~~~~~~~~~~---------~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      ..+..... ....         ...++-. ....|+++|+ +.++++-+.+++|++||+++
T Consensus       832 ~~tg~v~t-iaG~G~~G~~dG~~~~a~l~-~P~GIavd~d-G~lyVaDt~Nn~Irvid~~~  889 (1057)
T PLN02919        832 PATKRVTT-LAGTGKAGFKDGKALKAQLS-EPAGLALGEN-GRLFVADTNNSLIRYLDLNK  889 (1057)
T ss_pred             CCCCeEEE-EeccCCcCCCCCcccccccC-CceEEEEeCC-CCEEEEECCCCEEEEEECCC
Confidence            98754221 0000         0011112 3568999994 57999999999999999943

>KOG1275|consensus

Probab=97.44  E-value=0.00076  Score=61.49  Aligned_cols=97  Identities=12%  Similarity=0.163  Sum_probs=71.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEe---------CCCcEEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATT---------LEAKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s---------~Dg~I~iWD~~~~~~~~~~~   70 (174)
                      ++.+|...|+|.+-|+++.+.+.++. |.+.|..++..     +|.|+|++         .|..|+|||+|+...+.   
T Consensus       189 ~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~-----GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~---  260 (1118)
T KOG1275|consen  189 NLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ-----GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALS---  260 (1118)
T ss_pred             EEEeecccceEEeecCCcCceeeeeeccccceeeeecc-----CCeEEEeecccccccccccchhhhhhhhhhhccC---
Confidence            36789999999999999998887765 56667655443     48999986         46678999999865321   


Q ss_pred             eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          71 YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        71 ~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                        .+.-+-+ + -=++|+|.=...+|.+|.-|...+-|.
T Consensus       261 --PI~~~~~-P-~flrf~Psl~t~~~V~S~sGq~q~vd~  295 (1118)
T KOG1275|consen  261 --PIQFPYG-P-QFLRFHPSLTTRLAVTSQSGQFQFVDT  295 (1118)
T ss_pred             --CcccccC-c-hhhhhcccccceEEEEecccceeeccc
Confidence              1222222 2 346899977778999999999999884

>KOG1354|consensus

Probab=97.42  E-value=0.00052  Score=56.54  Aligned_cols=107  Identities=12%  Similarity=0.300  Sum_probs=71.4

Q ss_pred             CEEEEecCCcEEEEECCC-CC--eEE--Ee-e------------cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           1 MVVAGYDNGDLKMFDLKT-MS--LKW--ET-N------------LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~-~~--~~~--~~-~------------~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      .||+|..+|.|-++.-.. .+  ...  .+ .            ....|+.|.|-+.+ +...++..+.|.+||+|-++.
T Consensus        39 ~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~-n~a~FLlstNdktiKlWKi~e  117 (433)
T KOG1354|consen   39 RLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDG-NLAEFLLSTNDKTIKLWKIRE  117 (433)
T ss_pred             eEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCC-CccEEEEecCCcceeeeeeec
Confidence            489999999999996432 21  111  11 1            12458888888765 456788889999999999875


Q ss_pred             ccccc---------------ceeeee----------------ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          63 LHREK---------------GFAYLS----------------EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        63 ~~~~~---------------~~~~~~----------------~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .....               .+.+..                -.+|.- -|++++++. +...|.|+. |=+|+||++|-
T Consensus       118 r~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHty-hiNSIS~Ns-D~Et~lSAD-dLRINLWnlei  194 (433)
T KOG1354|consen  118 RGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTY-HINSISVNS-DKETFLSAD-DLRINLWNLEI  194 (433)
T ss_pred             cccccccccccccCCCCccceeeceeeccccceeeeeeeeecccccee-EeeeeeecC-ccceEeecc-ceeeeeccccc
Confidence            42110               000000                126777 899999999 566777655 88999999954

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.40  E-value=0.0051  Score=52.61  Aligned_cols=92  Identities=11%  Similarity=0.137  Sum_probs=55.6

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCC--CcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLE--AKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~D--g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +..|.++|+.+++..........+...+|+|++   ..|+ +.+.+  ..|.++|+.+++..      .+..+.. ....
T Consensus       212 ~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG---~~la~~~~~~g~~~Iy~~dl~~g~~~------~LT~~~~-~d~~  281 (419)
T PRK04043        212 KPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDG---SKLLLTMAPKGQPDIYLYDTNTKTLT------QITNYPG-IDVN  281 (419)
T ss_pred             CCEEEEEECCCCcEEEEecCCCcEEeeEECCCC---CEEEEEEccCCCcEEEEEECCCCcEE------EcccCCC-ccCc
Confidence            456888999888765544444556678899975   6654 44434  56778888775421      1112222 2234


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..|+|++..++.+....|.-.||-+
T Consensus       282 p~~SPDG~~I~F~Sdr~g~~~Iy~~  306 (419)
T PRK04043        282 GNFVEDDKRIVFVSDRLGYPNIFMK  306 (419)
T ss_pred             cEECCCCCEEEEEECCCCCceEEEE
Confidence            5799977666666655565444433

>KOG4190|consensus

Probab=97.38  E-value=0.00043  Score=60.29  Aligned_cols=99  Identities=10%  Similarity=0.202  Sum_probs=62.0

Q ss_pred             EEEEecCCcEEEEECCC-------CCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeee
Q psy6415           2 VVAGYDNGDLKMFDLKT-------MSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~-------~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      .++++.|.+||+|.++.       ..|+++. .|+..|+++-|-.+   ...+  +|.||.|.+||.--+..+..+.-. 
T Consensus       750 FiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~---lr~i--~ScD~giHlWDPFigr~Laq~~da-  823 (1034)
T KOG4190|consen  750 FISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD---LRSI--ASCDGGIHLWDPFIGRLLAQMEDA-  823 (1034)
T ss_pred             eeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec---ccee--eeccCcceeecccccchhHhhhcC-
Confidence            57899999999999874       2355553 47788999988753   1334  566999999997544332211100 


Q ss_pred             ecccCcCcEEEEEEcCC-C-CCEEEEEcCCCcEEEEec
Q psy6415          74 EKAHKATTVWAAKHLPQ-N-RDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~-~-~~~las~s~Dg~V~lWd~  109 (174)
                       ..| + .+..|.--|. + .-++|-|+...+||++|.
T Consensus       824 -pk~-~-a~~~ikcl~nv~~~iliAgcsaeSTVKl~Da  858 (1034)
T KOG4190|consen  824 -PKE-G-AGGNIKCLENVDRHILIAGCSAESTVKLFDA  858 (1034)
T ss_pred             -ccc-C-CCceeEecccCcchheeeeccchhhheeeec
Confidence             112 1 2333333332 2 335566689999999998

>smart00320 WD40 WD40 repeats

Probab=97.35  E-value=0.00095  Score=34.82  Aligned_cols=30  Identities=17%  Similarity=0.276  Sum_probs=26.3

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEE
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFD   59 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD   59 (174)
                      +...|+++.|++..   +.+++++.|+.|++||
T Consensus        11 ~~~~i~~~~~~~~~---~~~~~~~~d~~~~~~~   40 (40)
T smart00320       11 HTGPVTSVAFSPDG---KYLASASDDGTIKLWD   40 (40)
T ss_pred             cCCceeEEEECCCC---CEEEEecCCCeEEEcC
Confidence            56789999999863   7899999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.33  E-value=0.001  Score=57.96  Aligned_cols=58  Identities=14%  Similarity=0.196  Sum_probs=46.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL   63 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~   63 (174)
                      |+.|+.||+|.+||.+++..... ...-..+.++|+|++   ..+++|+.-|.+.+||+.-.
T Consensus       274 LvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~g---ai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  274 LVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDG---AIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             EEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCC---cEEEEEcCCceEEEEEeecC
Confidence            68899999999999987754332 223346789999975   88999999999999998743

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.32  E-value=0.019  Score=46.15  Aligned_cols=166  Identities=16%  Similarity=0.126  Sum_probs=89.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-------ecCCCEEEEEecCCCCCC---CEEEEEeCCCcEEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-------NLKNGVCGVDFDRRDIPM---NKLVATTLEAKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-------~~~~~V~sv~f~~~~~~~---~~l~s~s~Dg~I~iWD~~~~~~~~~~~   70 (174)
                      +||.+...|+|+++|+-+..+-...       .....|.++.|-+...+.   ..|+.-..+|.++=+=+..+.......
T Consensus        57 lLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e  136 (282)
T PF15492_consen   57 LLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQE  136 (282)
T ss_pred             EEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCccee
Confidence            4788899999999999764432111       112457777775432111   247777788888877653211100111


Q ss_pred             ee--eecc-cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCC-CCCccccc
Q psy6415          71 YL--SEKA-HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDI-DDIPMGVP  146 (174)
Q Consensus        71 ~~--~~~~-h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dg~~~~~~  146 (174)
                      .+  .+.. +.. .|.++.|+|...-+++.|.+...-..+..      ...+-..+|....+|-...+... |+ .....
T Consensus       137 ~hsfsf~~~yp~-Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a------~~~GLtaWRiL~~~Pyyk~v~~~~~~-~~~~~  208 (282)
T PF15492_consen  137 NHSFSFSSHYPH-GINSAVYHPKHRLLLVGGCEQNQDGMSKA------SSCGLTAWRILSDSPYYKQVTSSEDD-ITASS  208 (282)
T ss_pred             eEEEEecccCCC-ceeEEEEcCCCCEEEEeccCCCCCccccc------cccCceEEEEcCCCCcEEEccccCcc-ccccc
Confidence            11  2223 355 89999999965555565555543222211      22344567777777665544332 21 11111


Q ss_pred             cccceee-------ee-eccccceeeeeeCCCCCCC
Q psy6415         147 GSLTLLQ-------EA-TLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       147 ~~~~ll~-------~~-~~h~~~V~~l~~spd~~~~  174 (174)
                      .+.-++.       .. ..-...|..|..||||.-|
T Consensus       209 ~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~L  244 (282)
T PF15492_consen  209 KRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLL  244 (282)
T ss_pred             cccceeeccceeeeeccccCCCceEEEEECCCCCEE
Confidence            1121221       11 2235779999999999743

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.32  E-value=0.012  Score=41.02  Aligned_cols=68  Identities=15%  Similarity=0.075  Sum_probs=45.9

Q ss_pred             EEEEEecCCCC-CCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          31 VCGVDFDRRDI-PMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        31 V~sv~f~~~~~-~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |+++++...+. ..+.|+.||+|..||+|+-..  .     +..+. ..+ .|.++.-.+  ...||.|-.+|+|-+|+-
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--~-----~~Ei~-e~~-~v~~L~~~~--~~~F~Y~l~NGTVGvY~~   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--I-----VAEIT-ETD-KVTSLCSLG--GGRFAYALANGTVGVYDR   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--E-----EEEEe-ccc-ceEEEEEcC--CCEEEEEecCCEEEEEeC
Confidence            45555433221 136799999999999998654  1     22222 234 677777666  357999999999998877

>KOG1409|consensus

Probab=97.31  E-value=0.0012  Score=54.42  Aligned_cols=77  Identities=14%  Similarity=0.315  Sum_probs=61.2

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEE
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLN  105 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~  105 (174)
                      .|...+.+++|+|..   ..|.+|..|..|-+||+-...-    ....+.+|.. -|..+.+-+. -..+.|+++||.|.
T Consensus       195 ~h~~~~~~l~Wd~~~---~~LfSg~~d~~vi~wdigg~~g----~~~el~gh~~-kV~~l~~~~~-t~~l~S~~edg~i~  265 (404)
T KOG1409|consen  195 GHTGEVTCLKWDPGQ---RLLFSGASDHSVIMWDIGGRKG----TAYELQGHND-KVQALSYAQH-TRQLISCGEDGGIV  265 (404)
T ss_pred             CcccceEEEEEcCCC---cEEEeccccCceEEEeccCCcc----eeeeeccchh-hhhhhhhhhh-heeeeeccCCCeEE
Confidence            467889999999863   6789999999999999976432    2345568888 8888877764 45788999999999


Q ss_pred             EEeccc
Q psy6415         106 LWQLVS  111 (174)
Q Consensus       106 lWd~~~  111 (174)
                      +|++..
T Consensus       266 ~w~mn~  271 (404)
T KOG1409|consen  266 VWNMNV  271 (404)
T ss_pred             EEeccc
Confidence            999954

>KOG4532|consensus

Probab=97.28  E-value=0.0086  Score=48.12  Aligned_cols=104  Identities=8%  Similarity=0.013  Sum_probs=65.9

Q ss_pred             EEEEecCCcEEEEECCCCCe-E-E--EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSL-K-W--ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~-~-~--~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +++.++...|-+|.+..... + .  ...-.+.=.+.+|+..+   ..+|+++.||++.|||+|.......+...+-..|
T Consensus       173 ~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~---~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~h  249 (344)
T KOG4532|consen  173 GSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSEND---LQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHH  249 (344)
T ss_pred             EEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCc---ceEEEEecCCcEEEEEecccccchhhhcccCCCC
Confidence            45667777888888754322 1 1  11123444677888754   6799999999999999997532111111122347


Q ss_pred             CcCcEEEEEEcCCCCC-EEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRD-LFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~-~las~s~Dg~V~lWd~  109 (174)
                      ++ ++..+.|+|.+.. +|.-.-.=+.+.+-|+
T Consensus       250 nG-a~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~  281 (344)
T KOG4532|consen  250 NG-AFRVCRFSLYGLLDLLFISEHFSRVHVVDT  281 (344)
T ss_pred             CC-ceEEEEecCCCcceEEEEecCcceEEEEEc
Confidence            77 9999999985432 3333444568889998

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=97.25  E-value=0.024  Score=47.01  Aligned_cols=103  Identities=15%  Similarity=0.154  Sum_probs=65.0

Q ss_pred             EEEEecCCcEEEEECCC-CCeEEE---ee-----------cCCCEEEEEecCCCCCCCEEEEE-eCCCcEEEEECCCccc
Q psy6415           2 VVAGYDNGDLKMFDLKT-MSLKWE---TN-----------LKNGVCGVDFDRRDIPMNKLVAT-TLEAKLFVFDLKTLHR   65 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~-~~~~~~---~~-----------~~~~V~sv~f~~~~~~~~~l~s~-s~Dg~I~iWD~~~~~~   65 (174)
                      +++-+.+|+|.++++.. +.+...   ..           ......++.|+|++   +.+++. -....|.+|++.....
T Consensus       102 ~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg---~~v~v~dlG~D~v~~~~~~~~~~  178 (345)
T PF10282_consen  102 YVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDG---RFVYVPDLGADRVYVYDIDDDTG  178 (345)
T ss_dssp             EEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTS---SEEEEEETTTTEEEEEEE-TTS-
T ss_pred             EEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCC---CEEEEEecCCCEEEEEEEeCCCc
Confidence            45567899999999986 443221   11           12347899999974   666654 3445799999986541


Q ss_pred             -ccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          66 -EKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        66 -~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       +........... . .=..++|+|++..+++..-.+++|.++++
T Consensus       179 ~l~~~~~~~~~~G-~-GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~  221 (345)
T PF10282_consen  179 KLTPVDSIKVPPG-S-GPRHLAFSPDGKYAYVVNELSNTVSVFDY  221 (345)
T ss_dssp             TEEEEEEEECSTT-S-SEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred             eEEEeeccccccC-C-CCcEEEEcCCcCEEEEecCCCCcEEEEee
Confidence             111111112222 2 45889999977778888999999999999

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG3914|consensus

Probab=97.23  E-value=0.00071  Score=56.33  Aligned_cols=64  Identities=8%  Similarity=0.096  Sum_probs=48.6

Q ss_pred             EEEEecCCcEEEEECCCCCeE--EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLK--WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF   69 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~--~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~   69 (174)
                      |+++..|+.||+=....-..+  +.+.|+.-|..++.-++    +.|++||.|++|++||++++++++.+
T Consensus       166 IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~----~~LlS~sGD~tlr~Wd~~sgk~L~t~  231 (390)
T KOG3914|consen  166 IITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN----YLLLSGSGDKTLRLWDITSGKLLDTC  231 (390)
T ss_pred             EEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC----ceeeecCCCCcEEEEecccCCccccc
Confidence            678888998888654432222  23567778999998874    66899999999999999998866554

>KOG1275|consensus

Probab=97.08  E-value=0.007  Score=55.48  Aligned_cols=157  Identities=16%  Similarity=0.169  Sum_probs=96.7

Q ss_pred             EEEecCCcEEEEECCCCCeEEEeecC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWETNLK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~~~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +-|+.-..+...|+++.+.....+.. .+|.-+..+.     ..+.+|..-|+|-+=|.++.+.     ++++.+|++ .
T Consensus       151 i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nn-----r~lf~G~t~G~V~LrD~~s~~~-----iht~~aHs~-s  219 (1118)
T KOG1275|consen  151 IMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNN-----RNLFCGDTRGTVFLRDPNSFET-----IHTFDAHSG-S  219 (1118)
T ss_pred             eecchhhheeeeecccceeeeeeeccCCceEEEEecC-----cEEEeecccceEEeecCCcCce-----eeeeecccc-c
Confidence            34555556677899888776655543 3577676653     6788999999999999998764     456679999 8


Q ss_pred             EEEEEEcCCCCCEEEEEcC---------CCcEEEEeccccccccc----cccceeeeecCCCCCCcccCCCCCcccc--c
Q psy6415          82 VWAAKHLPQNRDLFVTCGG---------SGSLNLWQLVSALRADT----NLCSIFRYSSNYPTQRTKPDIDDIPMGV--P  146 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~---------Dg~V~lWd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dg~~~~~--~  146 (174)
                      |..+..+   +++|+|||.         |.-|++||+..=....+    -+-+..++...|++...+....|..--+  +
T Consensus       220 iSDfDv~---GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~  296 (1118)
T KOG1275|consen  220 ISDFDVQ---GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTA  296 (1118)
T ss_pred             eeeeecc---CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeecccc
Confidence            8776543   568899875         55679999932000111    1225566777777666665544421111  1


Q ss_pred             cccc---eeeeeeccccceeeeeeCCCCCC
Q psy6415         147 GSLT---LLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       147 ~~~~---ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      +...   -++.+..-+..|..+++|++|+-
T Consensus       297 ~lsNP~~~~~~v~p~~s~i~~fDiSsn~~a  326 (1118)
T KOG1275|consen  297 TLSNPPAGVKMVNPNGSGISAFDISSNGDA  326 (1118)
T ss_pred             ccCCCccceeEEccCCCcceeEEecCCCce
Confidence            1111   01222222344888999988764

>KOG4190|consensus

Probab=97.04  E-value=0.00052  Score=59.78  Aligned_cols=77  Identities=16%  Similarity=0.284  Sum_probs=53.5

Q ss_pred             ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc--eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc
Q psy6415          26 NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG--FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS  103 (174)
Q Consensus        26 ~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~--~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~  103 (174)
                      .|.+.|..++--.+   .|.++++|.|++||+|.++..-...+  ....+..+|+. +|.++.|..+.. .+|  +.||-
T Consensus       733 GH~~~iRai~AidN---ENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk-~i~~igfL~~lr-~i~--ScD~g  805 (1034)
T KOG4190|consen  733 GHQEKIRAIAAIDN---ENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKK-PIHDIGFLADLR-SIA--SCDGG  805 (1034)
T ss_pred             CcHHHhHHHHhccc---ccceeeccCCceEEEEEeccccCccccceeeeEhhhccC-cccceeeeeccc-eee--eccCc
Confidence            34555665543322   48899999999999999986421111  12345568999 999999998543 444  66889


Q ss_pred             EEEEec
Q psy6415         104 LNLWQL  109 (174)
Q Consensus       104 V~lWd~  109 (174)
                      |.+||-
T Consensus       806 iHlWDP  811 (1034)
T KOG4190|consen  806 IHLWDP  811 (1034)
T ss_pred             ceeecc
Confidence            999995

>KOG1645|consensus

Probab=96.99  E-value=0.0029  Score=53.08  Aligned_cols=62  Identities=15%  Similarity=0.192  Sum_probs=54.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH   64 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~   64 (174)
                      +|..++.+.+|+|.|+++..+.........+.|.+|+.+.  .+.|..|-..|.|.|||+|..+
T Consensus       208 Ll~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde--~h~IYaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  208 LLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDE--RHVIYAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             eeeeeccCceEEEEecccceeeeheeccCCceeeeeccCC--cceeEEeccCceEEEEEccCCC
Confidence            4678899999999999998887776667889999999875  5788889999999999999865

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=96.96  E-value=0.049  Score=42.60  Aligned_cols=87  Identities=21%  Similarity=0.161  Sum_probs=49.2

Q ss_pred             EEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee--cc-cCcC
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE--KA-HKAT   80 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~--~~-h~~~   80 (174)
                      +-...+.|.-||..++......  .....++++.+.+   +.|+.+..++. .++|+.+.+...   +...  .. ... 
T Consensus        17 ~D~~~~~i~~~~~~~~~~~~~~--~~~~~G~~~~~~~---g~l~v~~~~~~-~~~d~~~g~~~~---~~~~~~~~~~~~-   86 (246)
T PF08450_consen   17 VDIPGGRIYRVDPDTGEVEVID--LPGPNGMAFDRPD---GRLYVADSGGI-AVVDPDTGKVTV---LADLPDGGVPFN-   86 (246)
T ss_dssp             EETTTTEEEEEETTTTEEEEEE--SSSEEEEEEECTT---SEEEEEETTCE-EEEETTTTEEEE---EEEEETTCSCTE-
T ss_pred             EEcCCCEEEEEECCCCeEEEEe--cCCCceEEEEccC---CEEEEEEcCce-EEEecCCCcEEE---EeeccCCCcccC-
Confidence            3444677777777766543322  2227788888332   56666666554 555988764321   1111  11 223 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCC
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGS  101 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~D  101 (174)
                      ..+.+++.|+ +.+++|....
T Consensus        87 ~~ND~~vd~~-G~ly~t~~~~  106 (246)
T PF08450_consen   87 RPNDVAVDPD-GNLYVTDSGG  106 (246)
T ss_dssp             EEEEEEE-TT-S-EEEEEECC
T ss_pred             CCceEEEcCC-CCEEEEecCC
Confidence            6789999995 5677776654

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG3621|consensus

Probab=96.96  E-value=0.0038  Score=55.54  Aligned_cols=106  Identities=19%  Similarity=0.167  Sum_probs=77.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee-eeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY-LSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~-~~~~~h   77 (174)
                      +|+-|+.-|.|.+++..+++.....+  ....++....|+++   .++|.|+..|.|.++-+....+...... .-.+.|
T Consensus        47 ~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e---~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~  123 (726)
T KOG3621|consen   47 YLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVE---YLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSH  123 (726)
T ss_pred             eEEEecccceEEEEecCchhhhcccccCccceEEEEEecchh---HhhhhhcCCceEEeehhhccCCCcceeeccccccC
Confidence            47889999999999998887654433  23445666777763   6678899999999999887433221111 112346


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .. .|.+++|++ ++..|.+|..-|+|.+=.+.+
T Consensus       124 ~~-rVTal~Ws~-~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  124 KC-RVTALEWSK-NGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             Cc-eEEEEEecc-cccEEeecCCCceEEEEEech
Confidence            77 899999999 566788999999999988844

>KOG2041|consensus

Probab=96.96  E-value=0.0039  Score=55.94  Aligned_cols=76  Identities=17%  Similarity=0.238  Sum_probs=60.4

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc---cc-------eeeeeecccCcCcEEEEEEcCCCCCEEEEE
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE---KG-------FAYLSEKAHKATTVWAAKHLPQNRDLFVTC   98 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~---~~-------~~~~~~~~h~~~~i~~v~fsP~~~~~las~   98 (174)
                      ....+++|+..   .++||.|+.||.+|+--+.+....   ++       .+-+++.+|+. .|.-|.|+-. .+-|-|.
T Consensus        15 vkL~c~~WNke---~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~-sV~vvTWNe~-~QKLTtS   89 (1189)
T KOG2041|consen   15 VKLHCAEWNKE---SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNA-SVMVVTWNEN-NQKLTTS   89 (1189)
T ss_pred             ceEEEEEEccc---CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcc-eEEEEEeccc-ccccccc
Confidence            34789999986   389999999999999988765321   11       01236789999 9999999984 4567999


Q ss_pred             cCCCcEEEEec
Q psy6415          99 GGSGSLNLWQL  109 (174)
Q Consensus        99 s~Dg~V~lWd~  109 (174)
                      ..+|-|-+|-+
T Consensus        90 Dt~GlIiVWml  100 (1189)
T KOG2041|consen   90 DTSGLIIVWML  100 (1189)
T ss_pred             CCCceEEEEee
Confidence            99999999999

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=96.92  E-value=0.058  Score=50.68  Aligned_cols=55  Identities=15%  Similarity=0.300  Sum_probs=43.0

Q ss_pred             EEEEecCCcEEEE----ECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEE
Q psy6415           2 VVAGYDNGDLKMF----DLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFD   59 (174)
Q Consensus         2 lasgs~Dg~iklW----Dl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD   59 (174)
                      |+.+..+|.|-+.    |..+..+...-....+|.+++|||+.   ..||..+.+++|-+-+
T Consensus        90 l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~---Ella~vT~~~~l~~mt  148 (928)
T PF04762_consen   90 LCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDE---ELLALVTGEGNLLLMT  148 (928)
T ss_pred             EEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCc---CEEEEEeCCCEEEEEe
Confidence            5677888999999    66666555444557899999999974   7888888888887664

>PRK04043 tolB translocation protein TolB; Provisional

Probab=96.91  E-value=0.035  Score=47.53  Aligned_cols=89  Identities=12%  Similarity=0.162  Sum_probs=51.6

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCE-EEEEeC---CCcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNK-LVATTL---EAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~-l~s~s~---Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      .|.+=|............ ....+-.|+|++   +. ++..+.   +..|.++|+.+++..   .+   ....+ .....
T Consensus       170 ~l~~~d~dg~~~~~~~~~-~~~~~p~wSpDG---~~~i~y~s~~~~~~~Iyv~dl~tg~~~---~l---t~~~g-~~~~~  238 (419)
T PRK04043        170 NIVLADYTLTYQKVIVKG-GLNIFPKWANKE---QTAFYYTSYGERKPTLYKYNLYTGKKE---KI---ASSQG-MLVVS  238 (419)
T ss_pred             eEEEECCCCCceeEEccC-CCeEeEEECCCC---CcEEEEEEccCCCCEEEEEECCCCcEE---EE---ecCCC-cEEee
Confidence            444445544433222222 356788999975   53 554443   456999999876532   11   12233 45567


Q ss_pred             EEcCCCCCEEEEEcCCC--cEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSG--SLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg--~V~lWd~  109 (174)
                      +|+|++..++.+.+.+|  .|.++|+
T Consensus       239 ~~SPDG~~la~~~~~~g~~~Iy~~dl  264 (419)
T PRK04043        239 DVSKDGSKLLLTMAPKGQPDIYLYDT  264 (419)
T ss_pred             EECCCCCEEEEEEccCCCcEEEEEEC
Confidence            89997766766666555  4555565

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=96.91  E-value=0.026  Score=47.02  Aligned_cols=94  Identities=18%  Similarity=0.156  Sum_probs=59.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |..++.+|.+..||+++++..+...... .......     ++.+..++.||.|..+|..+++.+-.+     ..-....
T Consensus       244 vy~~~~~g~l~a~d~~tG~~~W~~~~~~-~~~p~~~-----~~~vyv~~~~G~l~~~d~~tG~~~W~~-----~~~~~~~  312 (377)
T TIGR03300       244 VYAVSYQGRVAALDLRSGRVLWKRDASS-YQGPAVD-----DNRLYVTDADGVVVALDRRSGSELWKN-----DELKYRQ  312 (377)
T ss_pred             EEEEEcCCEEEEEECCCCcEEEeeccCC-ccCceEe-----CCEEEEECCCCeEEEEECCCCcEEEcc-----ccccCCc
Confidence            4556789999999999999887654221 1222222     267888889999999999886532111     0001101


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+...   .+..+..++.||.|.++|.
T Consensus       313 ~ssp~i---~g~~l~~~~~~G~l~~~d~  337 (377)
T TIGR03300       313 LTAPAV---VGGYLVVGDFEGYLHWLSR  337 (377)
T ss_pred             cccCEE---ECCEEEEEeCCCEEEEEEC
Confidence            111111   1346677899999999998

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2041|consensus

Probab=96.90  E-value=0.0091  Score=53.71  Aligned_cols=101  Identities=15%  Similarity=0.134  Sum_probs=72.2

Q ss_pred             CEEEEecCCcEEEEECCCCCe---------------EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL---------------KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH   64 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~---------------~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~   64 (174)
                      +||+|+.||.+|+-.+.+...               .++ ..|...|.-+.|+-.   .+.|-|+..+|.|-+|=+-+++
T Consensus        28 yIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~---~QKLTtSDt~GlIiVWmlykgs  104 (1189)
T KOG2041|consen   28 YIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNEN---NQKLTTSDTSGLIIVWMLYKGS  104 (1189)
T ss_pred             eEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccc---cccccccCCCceEEEEeeeccc
Confidence            589999999999998865421               011 246678999999975   3778888999999999988765


Q ss_pred             cccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          65 REKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        65 ~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -..++.  . ...++ .|.+++|+.+ +.-++..-+||.|-+=.+
T Consensus       105 W~EEMi--N-nRnKS-vV~SmsWn~d-G~kIcIvYeDGavIVGsv  144 (1189)
T KOG2041|consen  105 WCEEMI--N-NRNKS-VVVSMSWNLD-GTKICIVYEDGAVIVGSV  144 (1189)
T ss_pred             HHHHHh--h-CcCcc-EEEEEEEcCC-CcEEEEEEccCCEEEEee
Confidence            332221  0 12234 6889999994 566788888888876555

>KOG2079|consensus

Probab=96.86  E-value=0.0046  Score=57.44  Aligned_cols=99  Identities=22%  Similarity=0.318  Sum_probs=67.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      ||.|++-|.|-+.|+++.-....  .....+|.+++|+.++   ..++.|-.+|.|.+||+.+++..+.+   +..+|+.
T Consensus       102 ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg---~~l~~G~~~G~V~v~D~~~~k~l~~i---~e~~ap~  175 (1206)
T KOG2079|consen  102 IVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDG---SLLLAGLGDGHVTVWDMHRAKILKVI---TEHGAPV  175 (1206)
T ss_pred             EEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCC---ceeccccCCCcEEEEEccCCcceeee---eecCCcc
Confidence            67888999999999877533222  2335789999999864   78888999999999999987655433   2223333


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.|--+-+..++ ..+.++..-|.  +|.+
T Consensus       176 t~vi~v~~t~~n-S~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  176 TGVIFVGRTSQN-SKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             ceEEEEEEeCCC-cEEEEccCCCc--eEEE
Confidence            234444443323 36777777775  6776

>KOG2066|consensus

Probab=96.77  E-value=0.016  Score=52.37  Aligned_cols=91  Identities=15%  Similarity=0.120  Sum_probs=60.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++|-|..+|.|.+.+..... ...+.|...         +.+|.+++|||.||+|-|--+-+....+.   ..+   .. 
T Consensus        51 ~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~---------~~~Gey~asCS~DGkv~I~sl~~~~~~~~---~df---~r-  113 (846)
T KOG2066|consen   51 FFALGTHRGAVYLTTCQGNP-KTNFDHSSS---------ILEGEYVASCSDDGKVVIGSLFTDDEITQ---YDF---KR-  113 (846)
T ss_pred             eeeeccccceEEEEecCCcc-ccccccccc---------ccCCceEEEecCCCcEEEeeccCCcccee---Eec---CC-
Confidence            36677888888888765432 111211111         23468999999999999988877543321   122   24 


Q ss_pred             cEEEEEEcCC----CCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQ----NRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~----~~~~las~s~Dg~V~lWd~  109 (174)
                      ++.+|+++|+    ....|++||.-| +.|+.-
T Consensus       114 piksial~Pd~~~~~sk~fv~GG~ag-lvL~er  145 (846)
T KOG2066|consen  114 PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSER  145 (846)
T ss_pred             cceeEEeccchhhhhhhheeecCcce-EEEehh
Confidence            8999999996    234789999988 777643

>KOG1008|consensus

Probab=96.75  E-value=0.00075  Score=59.52  Aligned_cols=91  Identities=16%  Similarity=0.323  Sum_probs=59.9

Q ss_pred             CCcEEEEECCCCCeE------EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           8 NGDLKMFDLKTMSLK------WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         8 Dg~iklWDl~~~~~~------~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |-.++|||+.++-..      +......+.++++|-.+   ...+++|.....|+++|+|...... ..     -.+. .
T Consensus       128 ds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd---~klvlaGm~sr~~~ifdlRqs~~~~-~s-----vnTk-~  197 (783)
T KOG1008|consen  128 DSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRD---TKLVLAGMTSRSVHIFDLRQSLDSV-SS-----VNTK-Y  197 (783)
T ss_pred             cCCccceecccccCCCccccccccccccCccccccccC---cchhhcccccchhhhhhhhhhhhhh-hh-----hhhh-h
Confidence            678999999877221      11112356778888865   2567788888899999999532110 00     1111 3


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +..+...|+.+++||+-. ||.|-+||.
T Consensus       198 vqG~tVdp~~~nY~cs~~-dg~iAiwD~  224 (783)
T KOG1008|consen  198 VQGITVDPFSPNYFCSNS-DGDIAIWDT  224 (783)
T ss_pred             cccceecCCCCCceeccc-cCceeeccc
Confidence            455667787778888655 999999994

>KOG1912|consensus

Probab=96.68  E-value=0.021  Score=51.80  Aligned_cols=101  Identities=16%  Similarity=0.274  Sum_probs=70.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCC---------CCEEEEEeCCCcEEEEECCCcccccceee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIP---------MNKLVATTLEAKLFVFDLKTLHREKGFAY   71 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~---------~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~   71 (174)
                      ||-|+. ..|-+-|.++.+.++... |+..|++|.|.|....         .-.||++.-.|.|-|||........    
T Consensus        29 iAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~----  103 (1062)
T KOG1912|consen   29 IAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN----  103 (1062)
T ss_pred             EEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh----
Confidence            455554 678888999888777654 5678999999874321         1146778888999999998754321    


Q ss_pred             eeecccCcCcEEEEEEcCC---CCCEEEEEcCCCcEEEEec
Q psy6415          72 LSEKAHKATTVWAAKHLPQ---NRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~---~~~~las~s~Dg~V~lWd~  109 (174)
                       -+..|.. ++..+.|-|.   ...+|++=..-.+|.||+.
T Consensus       104 -~l~~~~~-~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwnt  142 (1062)
T KOG1912|consen  104 -WLSHSND-SVQDLCWVPARDDSRDVLLAIHGSSTLVLWNT  142 (1062)
T ss_pred             -hhcCCCc-chhheeeeeccCcchheeEEecCCcEEEEEEc
Confidence             2234555 7878877652   2356676677789999988

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=96.66  E-value=0.14  Score=44.39  Aligned_cols=95  Identities=15%  Similarity=0.005  Sum_probs=61.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC-cEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA-KLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg-~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|..|. |...|.+...+-.+ ...+..+|.-..+..+   ++.++.|..|| .+-|+|.++.+.      ..+...-+ 
T Consensus       335 ia~VSR-GkaFi~~~~~~~~i-qv~~~~~VrY~r~~~~---~e~~vigt~dgD~l~iyd~~~~e~------kr~e~~lg-  402 (668)
T COG4946         335 IALVSR-GKAFIMRPWDGYSI-QVGKKGGVRYRRIQVD---PEGDVIGTNDGDKLGIYDKDGGEV------KRIEKDLG-  402 (668)
T ss_pred             EEEEec-CcEEEECCCCCeeE-EcCCCCceEEEEEccC---CcceEEeccCCceEEEEecCCceE------EEeeCCcc-
Confidence            344443 55666555444332 3345677887777665   36799999999 899999998652      12223334 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -|-+|..+|+ +..++.+.....+.+.|+
T Consensus       403 ~I~av~vs~d-GK~~vvaNdr~el~vidi  430 (668)
T COG4946         403 NIEAVKVSPD-GKKVVVANDRFELWVIDI  430 (668)
T ss_pred             ceEEEEEcCC-CcEEEEEcCceEEEEEEe
Confidence            7999999995 455566666666666666

>KOG2314|consensus

Probab=96.57  E-value=0.013  Score=51.22  Aligned_cols=73  Identities=21%  Similarity=0.345  Sum_probs=50.7

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEe-----------CCCcEEEEECCCcccccceeeeeecccCcCcEEEE-EEcCCCCCEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATT-----------LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA-KHLPQNRDLF   95 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s-----------~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v-~fsP~~~~~l   95 (174)
                      +.+|.-++|||.   .++|+|=|           +...+.|||++++...+.|..  ++ .+. .+|.+ +||-+ ..+|
T Consensus       249 Hp~Vq~idfSP~---EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~--~~-~~~-~~WP~frWS~D-dKy~  320 (698)
T KOG2314|consen  249 HPGVQFIDFSPN---EKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPV--IK-SPY-LKWPIFRWSHD-DKYF  320 (698)
T ss_pred             CCCceeeecCCc---cceEEEecCCccccCcccCCCceEEEEEccccchhcceec--cC-CCc-cccceEEeccC-Ccee
Confidence            456888999997   38888753           225789999999876555542  11 233 57764 89984 5577


Q ss_pred             EEEcCCCcEEEEec
Q psy6415          96 VTCGGSGSLNLWQL  109 (174)
Q Consensus        96 as~s~Dg~V~lWd~  109 (174)
                      |--.. .+|.|++.
T Consensus       321 Arm~~-~sisIyEt  333 (698)
T KOG2314|consen  321 ARMTG-NSISIYET  333 (698)
T ss_pred             EEecc-ceEEEEec
Confidence            75555 57999988

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=96.50  E-value=0.034  Score=46.33  Aligned_cols=92  Identities=14%  Similarity=0.123  Sum_probs=58.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCC-EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNG-VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~-V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      |..++.||.|..+|..+++.++... .... ..+....     ++.|++++.||.|.++|.++++.+.     ....+..
T Consensus       282 vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~-----g~~l~~~~~~G~l~~~d~~tG~~~~-----~~~~~~~  351 (377)
T TIGR03300       282 LYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAVV-----GGYLVVGDFEGYLHWLSREDGSFVA-----RLKTDGS  351 (377)
T ss_pred             EEEECCCCeEEEEECCCCcEEEccccccCCccccCEEE-----CCEEEEEeCCCEEEEEECCCCCEEE-----EEEcCCC
Confidence            5567889999999999998876542 2222 2222222     3688999999999999998876432     2222332


Q ss_pred             CcEEEE-EEcCCCCCEEEEEcCCCcEEEE
Q psy6415          80 TTVWAA-KHLPQNRDLFVTCGGSGSLNLW  107 (174)
Q Consensus        80 ~~i~~v-~fsP~~~~~las~s~Dg~V~lW  107 (174)
                       .++.- .+.  ++. |..++.||.|..|
T Consensus       352 -~~~~sp~~~--~~~-l~v~~~dG~l~~~  376 (377)
T TIGR03300       352 -GIASPPVVV--GDG-LLVQTRDGDLYAF  376 (377)
T ss_pred             -ccccCCEEE--CCE-EEEEeCCceEEEe
Confidence             23221 222  333 5568889988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.47  E-value=0.056  Score=49.67  Aligned_cols=98  Identities=11%  Similarity=0.088  Sum_probs=61.7

Q ss_pred             EecCCcEEEEECCCCCeEEEeecCCC--EEEEEecCCC--C--CCCEEEEEeCCCcEEEEECCCcc--cccceeeeeecc
Q psy6415           5 GYDNGDLKMFDLKTMSLKWETNLKNG--VCGVDFDRRD--I--PMNKLVATTLEAKLFVFDLKTLH--REKGFAYLSEKA   76 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~~~~~~~~~--V~sv~f~~~~--~--~~~~l~s~s~Dg~I~iWD~~~~~--~~~~~~~~~~~~   76 (174)
                      ......|.-.||.+|+++.....+..  |..+  -|+.  .  ....-..|=.++.+-.||.|-..  .+.. ..+.. .
T Consensus       500 ~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~-~~k~Y-~  575 (794)
T PF08553_consen  500 PNNPNKLYKMDLERGKVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDS-QSKQY-S  575 (794)
T ss_pred             CCCCCceEEEecCCCcEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCceeec-ccccc-c
Confidence            34567888889999999876554332  4444  3321  0  12346677788999999999642  1110 00111 2


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ... ...+++-+. ++ .||.||.+|.|||||-
T Consensus       576 ~~~-~Fs~~aTt~-~G-~iavgs~~G~IRLyd~  605 (794)
T PF08553_consen  576 SKN-NFSCFATTE-DG-YIAVGSNKGDIRLYDR  605 (794)
T ss_pred             cCC-CceEEEecC-Cc-eEEEEeCCCcEEeecc
Confidence            223 566777665 34 6799999999999997

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=96.45  E-value=0.0086  Score=49.08  Aligned_cols=107  Identities=10%  Similarity=0.236  Sum_probs=68.3

Q ss_pred             CEEEEecCCcEEEEECCCCC-eEEE----e-------------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-LKWE----T-------------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-~~~~----~-------------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      +||+|..-|.|-++.-.... |...    +             .....|+.|.|-.+. ..+.++..+.|.+||||-++.
T Consensus        40 YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t-~r~hFLlstNdktiKlWKiye  118 (460)
T COG5170          40 YLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDT-GRNHFLLSTNDKTIKLWKIYE  118 (460)
T ss_pred             eEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCC-CcceEEEecCCceeeeeeeec
Confidence            47888888999999754321 2210    0             112457788776543 346688888999999999986


Q ss_pred             ccc---------------cc-------ceeee----------------eecccCcCcEEEEEEcCCCCCEEEEEcCCCcE
Q psy6415          63 LHR---------------EK-------GFAYL----------------SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSL  104 (174)
Q Consensus        63 ~~~---------------~~-------~~~~~----------------~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V  104 (174)
                      ...               ..       ...+.                .-.+|.- .|++++|+. +...|.|+ .|=+|
T Consensus       119 knlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~y-hiNSiS~Ns-D~et~lSa-DdLrI  195 (460)
T COG5170         119 KNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPY-HINSISFNS-DKETLLSA-DDLRI  195 (460)
T ss_pred             ccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceecccccee-EeeeeeecC-chheeeec-cceee
Confidence            510               00       00000                0135666 899999998 45677754 47899


Q ss_pred             EEEeccc
Q psy6415         105 NLWQLVS  111 (174)
Q Consensus       105 ~lWd~~~  111 (174)
                      +||+++-
T Consensus       196 NLWnl~i  202 (460)
T COG5170         196 NLWNLEI  202 (460)
T ss_pred             eeccccc
Confidence            9999843

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.38  E-value=0.046  Score=50.24  Aligned_cols=95  Identities=14%  Similarity=0.107  Sum_probs=66.5

Q ss_pred             EEEecCCcEEEEECCCC--CeEEE----eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           3 VAGYDNGDLKMFDLKTM--SLKWE----TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~--~~~~~----~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      ..|-.+..+..||.|-.  +++..    ........+++-+.+    ..||.||.+|.|||||-- +...++    .+.+
T Consensus       546 flGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~----G~iavgs~~G~IRLyd~~-g~~AKT----~lp~  616 (794)
T PF08553_consen  546 FLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTED----GYIAVGSNKGDIRLYDRL-GKRAKT----ALPG  616 (794)
T ss_pred             EEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCC----ceEEEEeCCCcEEeeccc-chhhhh----cCCC
Confidence            46888999999999853  23321    122455778887765    589999999999999943 222221    2234


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -.. +|..|..+.++.-+||||-  ..+-|.+.
T Consensus       617 lG~-pI~~iDvt~DGkwilaTc~--tyLlLi~t  646 (794)
T PF08553_consen  617 LGD-PIIGIDVTADGKWILATCK--TYLLLIDT  646 (794)
T ss_pred             CCC-CeeEEEecCCCcEEEEeec--ceEEEEEE
Confidence            456 9999999997766676664  48888887

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=96.28  E-value=0.24  Score=41.07  Aligned_cols=100  Identities=17%  Similarity=0.260  Sum_probs=64.6

Q ss_pred             EEEecCCcEEEEECCC-CCeE---EEeecCCC----------EEEEEecCCCCCCCEEEEEe--CCCcEEEEECCCcccc
Q psy6415           3 VAGYDNGDLKMFDLKT-MSLK---WETNLKNG----------VCGVDFDRRDIPMNKLVATT--LEAKLFVFDLKTLHRE   66 (174)
Q Consensus         3 asgs~Dg~iklWDl~~-~~~~---~~~~~~~~----------V~sv~f~~~~~~~~~l~s~s--~Dg~I~iWD~~~~~~~   66 (174)
                      .+-+.-|.|.++-++. |.+.   ....|...          +.+..|+|++   ++|++..  .| .|.+||+..+...
T Consensus       105 ~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~---~~l~v~DLG~D-ri~~y~~~dg~L~  180 (346)
T COG2706         105 VANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDG---RYLVVPDLGTD-RIFLYDLDDGKLT  180 (346)
T ss_pred             EEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCC---CEEEEeecCCc-eEEEEEcccCccc
Confidence            3445568888888865 4332   22333333          7889999974   7787764  44 5889999865422


Q ss_pred             cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          67 KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        67 ~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ... ....+. .. .-+.+.|||+++-..+.+=-+++|-+|.+
T Consensus       181 ~~~-~~~v~~-G~-GPRHi~FHpn~k~aY~v~EL~stV~v~~y  220 (346)
T COG2706         181 PAD-PAEVKP-GA-GPRHIVFHPNGKYAYLVNELNSTVDVLEY  220 (346)
T ss_pred             ccc-ccccCC-CC-CcceEEEcCCCcEEEEEeccCCEEEEEEE
Confidence            111 111111 12 45789999976666677788999999999

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=96.24  E-value=0.065  Score=46.40  Aligned_cols=88  Identities=16%  Similarity=0.277  Sum_probs=60.0

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE--EEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL--VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l--~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      ..+.|.+++...+.......+.|....|+|..   +.+  ++|-.+.++.++|++.+ .+     ..  .-+. .=+.+-
T Consensus       255 snLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S---~~F~vi~g~~pa~~s~~~lr~N-l~-----~~--~Pe~-~rNT~~  322 (561)
T COG5354         255 SNLYLLRITERSIPVEKDLKDPVHDFTWEPLS---SRFAVISGYMPASVSVFDLRGN-LR-----FY--FPEQ-KRNTIF  322 (561)
T ss_pred             ceEEEEeecccccceeccccccceeeeecccC---CceeEEecccccceeecccccc-eE-----Ee--cCCc-cccccc
Confidence            45677777755554444446889999999975   444  45568999999999985 11     11  2223 456788


Q ss_pred             EcCCCCCEEEEEcCC---CcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGS---GSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~D---g~V~lWd~  109 (174)
                      |||. ..++..++.|   |.|-+||.
T Consensus       323 fsp~-~r~il~agF~nl~gni~i~~~  347 (561)
T COG5354         323 FSPH-ERYILFAGFDNLQGNIEIFDP  347 (561)
T ss_pred             ccCc-ccEEEEecCCccccceEEecc
Confidence            9995 4566666654   68999998

>KOG4640|consensus

Probab=96.21  E-value=0.023  Score=50.23  Aligned_cols=80  Identities=11%  Similarity=0.183  Sum_probs=56.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEE-EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVC-GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~-sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +||.+-.+|.|-+..+. -+.++... +...|. +++|.|++   +.||.|=.||+|+|-|+.++..++.+..    .-.
T Consensus        34 LiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DG---kllaVg~kdG~I~L~Dve~~~~l~~~~~----s~e  105 (665)
T KOG4640|consen   34 LIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDG---KLLAVGFKDGTIRLHDVEKGGRLVSFLF----SVE  105 (665)
T ss_pred             hhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCC---CEEEEEecCCeEEEEEccCCCceecccc----ccc
Confidence            46788888888887776 44455554 445565 99999974   9999999999999999999765543211    112


Q ss_pred             cCcEEEEEEcC
Q psy6415          79 ATTVWAAKHLP   89 (174)
Q Consensus        79 ~~~i~~v~fsP   89 (174)
                      . .|.++-|.|
T Consensus       106 ~-~is~~~w~~  115 (665)
T KOG4640|consen  106 T-DISKGIWDR  115 (665)
T ss_pred             c-chheeeccc
Confidence            3 566666654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=96.19  E-value=0.2  Score=41.99  Aligned_cols=91  Identities=20%  Similarity=0.264  Sum_probs=59.5

Q ss_pred             CcEEEEECCCCCeEE-----Eee--------cCCCEEEEEecCCCCCCCEEEE-E---------eCCCcEEEEECCCccc
Q psy6415           9 GDLKMFDLKTMSLKW-----ETN--------LKNGVCGVDFDRRDIPMNKLVA-T---------TLEAKLFVFDLKTLHR   65 (174)
Q Consensus         9 g~iklWDl~~~~~~~-----~~~--------~~~~V~sv~f~~~~~~~~~l~s-~---------s~Dg~I~iWD~~~~~~   65 (174)
                      |+|.+-|+.+.....     ...        ...++.-++++|++   +.+.. .         ...+.|.++|.++.+.
T Consensus       215 G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg---~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv  291 (352)
T TIGR02658       215 GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRAR---DRIYLLADQRAKWTHKTASRFLFVVDAKTGKR  291 (352)
T ss_pred             CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCC---CEEEEEecCCccccccCCCCEEEEEECCCCeE
Confidence            899999965443211     111        12344559999975   55544 3         2226899999998764


Q ss_pred             ccceeeeeecccCcCcEEEEEEcCCCC-CEEEEEcCCCcEEEEec
Q psy6415          66 EKGFAYLSEKAHKATTVWAAKHLPQNR-DLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        66 ~~~~~~~~~~~h~~~~i~~v~fsP~~~-~~las~s~Dg~V~lWd~  109 (174)
                      +...     .- .. .++.++|+|++. .++++...++.|.+.|.
T Consensus       292 i~~i-----~v-G~-~~~~iavS~Dgkp~lyvtn~~s~~VsViD~  329 (352)
T TIGR02658       292 LRKI-----EL-GH-EIDSINVSQDAKPLLYALSTGDKTLYIFDA  329 (352)
T ss_pred             EEEE-----eC-CC-ceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence            4322     11 23 789999999776 55566668899999999

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4640|consensus

Probab=96.18  E-value=0.028  Score=49.66  Aligned_cols=76  Identities=13%  Similarity=0.174  Sum_probs=56.9

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEE-EEEEcCCCCCEEEEEcCCCcEEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVW-AAKHLPQNRDLFVTCGGSGSLNL  106 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~-~v~fsP~~~~~las~s~Dg~V~l  106 (174)
                      ...|..+.|+|.   ...||++..+|.|-+.-+.-+      .+.++.-|.. .+. +++|.|+ +.++|.|=.||+|+|
T Consensus        20 ~~~i~~~ewnP~---~dLiA~~t~~gelli~R~n~q------Rlwtip~p~~-~v~~sL~W~~D-GkllaVg~kdG~I~L   88 (665)
T KOG4640|consen   20 PINIKRIEWNPK---MDLIATRTEKGELLIHRLNWQ------RLWTIPIPGE-NVTASLCWRPD-GKLLAVGFKDGTIRL   88 (665)
T ss_pred             ccceEEEEEcCc---cchhheeccCCcEEEEEeccc------eeEeccCCCC-ccceeeeecCC-CCEEEEEecCCeEEE
Confidence            456888999995   588999999998876665531      1333333444 455 9999995 789999999999999


Q ss_pred             Eecccccc
Q psy6415         107 WQLVSALR  114 (174)
Q Consensus       107 Wd~~~~~~  114 (174)
                      -|+++..+
T Consensus        89 ~Dve~~~~   96 (665)
T KOG4640|consen   89 HDVEKGGR   96 (665)
T ss_pred             EEccCCCc
Confidence            99976444

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.13  E-value=0.023  Score=33.50  Aligned_cols=28  Identities=21%  Similarity=0.305  Sum_probs=25.9

Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|..++|+|. ..++|.++.||.|.++.+
T Consensus        13 ~v~~~~w~P~-mdLiA~~t~~g~v~v~Rl   40 (47)
T PF12894_consen   13 RVSCMSWCPT-MDLIALGTEDGEVLVYRL   40 (47)
T ss_pred             cEEEEEECCC-CCEEEEEECCCeEEEEEC
Confidence            7999999994 679999999999999998

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=96.11  E-value=0.09  Score=44.06  Aligned_cols=97  Identities=14%  Similarity=0.034  Sum_probs=63.6

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEe---------CCCcEEEEECCCcccccceeeeeeccc-
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATT---------LEAKLFVFDLKTLHREKGFAYLSEKAH-   77 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s---------~Dg~I~iWD~~~~~~~~~~~~~~~~~h-   77 (174)
                      ++|.+.|..+++.+-.......-..+ ++|++   ..| ++.+         .+..|.+||+.+.+......+-. ..+ 
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~~~-~spDg---~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~-~p~~  101 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPNPV-VASDG---SFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPE-GPRF  101 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCcee-ECCCC---CEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCC-Cchh
Confidence            89999999998877655433222334 88875   555 5566         79999999999977543322100 001 


Q ss_pred             --CcCcEEEEEEcCCCCCEEEEE-cCCCcEEEEeccc
Q psy6415          78 --KATTVWAAKHLPQNRDLFVTC-GGSGSLNLWQLVS  111 (174)
Q Consensus        78 --~~~~i~~v~fsP~~~~~las~-s~Dg~V~lWd~~~  111 (174)
                        .. .-+.++++|++..++++- +-+..|.+.|+++
T Consensus       102 ~~~~-~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~  137 (352)
T TIGR02658       102 LVGT-YPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEG  137 (352)
T ss_pred             hccC-ccceEEECCCCCEEEEecCCCCCEEEEEECCC
Confidence              11 335789999766555544 3389999999955

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=96.10  E-value=0.12  Score=39.61  Aligned_cols=100  Identities=20%  Similarity=0.189  Sum_probs=60.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEE-EEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCG-VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~s-v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |.+++.++.|..||..+|+.++.......+.. ....     ++.++.++.|+.|..+|.++++..-.............
T Consensus        39 v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~-----~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~  113 (238)
T PF13360_consen   39 VYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVD-----GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVR  113 (238)
T ss_dssp             EEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEE-----TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB
T ss_pred             EEEEcCCCEEEEEECCCCCEEEEeeccccccceeeec-----ccccccccceeeeEecccCCcceeeeeccccccccccc
Confidence            45667999999999999999887664433221 1222     26777788889999999988764322100000000000


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ......+.   +..++.+..++.|..+|.
T Consensus       114 ~~~~~~~~---~~~~~~~~~~g~l~~~d~  139 (238)
T PF13360_consen  114 SSSSPAVD---GDRLYVGTSSGKLVALDP  139 (238)
T ss_dssp             --SEEEEE---TTEEEEEETCSEEEEEET
T ss_pred             cccCceEe---cCEEEEEeccCcEEEEec
Confidence            11122222   345666777999999998

...

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=95.94  E-value=0.097  Score=45.35  Aligned_cols=95  Identities=16%  Similarity=0.279  Sum_probs=63.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +++|+.+-++.++|+++. +.+. .....=+.+.|+|..   ++++.++-|   |.|-+||....-.    ....+.+- 
T Consensus       291 vi~g~~pa~~s~~~lr~N-l~~~-~Pe~~rNT~~fsp~~---r~il~agF~nl~gni~i~~~~~rf~----~~~~~~~~-  360 (561)
T COG5354         291 VISGYMPASVSVFDLRGN-LRFY-FPEQKRNTIFFSPHE---RYILFAGFDNLQGNIEIFDPAGRFK----VAGAFNGL-  360 (561)
T ss_pred             EEecccccceeecccccc-eEEe-cCCcccccccccCcc---cEEEEecCCccccceEEeccCCceE----EEEEeecC-
Confidence            678899999999999987 3322 223445667899974   888887644   6799999877421    11122222 


Q ss_pred             cCcEEEEEEcCCCCCEEEEE------cCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTC------GGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~------s~Dg~V~lWd~  109 (174)
                        ...-+.|+|+ ++.+-++      -.|..|+|||+
T Consensus       361 --n~s~~~wspd-~qF~~~~~ts~k~~~Dn~i~l~~v  394 (561)
T COG5354         361 --NTSYCDWSPD-GQFYDTDTTSEKLRVDNSIKLWDV  394 (561)
T ss_pred             --CceEeeccCC-ceEEEecCCCcccccCcceEEEEe
Confidence              2345689995 5555544      34789999999

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=95.93  E-value=0.2  Score=41.13  Aligned_cols=125  Identities=22%  Similarity=0.186  Sum_probs=70.0

Q ss_pred             EEEEECCCCCeEEEeecCCC--EE-EEEecCCCCCCCEEEEE-----eCCCcEEEEECC-CcccccceeeeeecccCcCc
Q psy6415          11 LKMFDLKTMSLKWETNLKNG--VC-GVDFDRRDIPMNKLVAT-----TLEAKLFVFDLK-TLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus        11 iklWDl~~~~~~~~~~~~~~--V~-sv~f~~~~~~~~~l~s~-----s~Dg~I~iWD~~-~~~~~~~~~~~~~~~h~~~~   81 (174)
                      ..+||.++++.........+  .+ --.|++++   ++|.+.     +..|.|-|||.+ +...+.     .+..|.- .
T Consensus        30 ~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG---~~LytTEnd~~~g~G~IgVyd~~~~~~ri~-----E~~s~GI-G  100 (305)
T PF07433_consen   30 ALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDG---RLLYTTENDYETGRGVIGVYDAARGYRRIG-----EFPSHGI-G  100 (305)
T ss_pred             EEEEEcCCCceeeEEcCCCCCEEecCEEEcCCC---CEEEEeccccCCCcEEEEEEECcCCcEEEe-----EecCCCc-C
Confidence            46799999987655432222  11 24689874   788776     456899999998 322222     2333333 2


Q ss_pred             EEEEEEcCCCCCEEEEEcC-------CCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc-ccccceee
Q psy6415          82 VWAAKHLPQNRDLFVTCGG-------SGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV-PGSLTLLQ  153 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~-------Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~-~~~~~ll~  153 (174)
                      =..+.+.|+++. |+.|-.       .|+.|| ++                          ..++-.-+.+ ..+++|+.
T Consensus       101 PHel~l~pDG~t-LvVANGGI~Thpd~GR~kL-Nl--------------------------~tM~psL~~ld~~sG~ll~  152 (305)
T PF07433_consen  101 PHELLLMPDGET-LVVANGGIETHPDSGRAKL-NL--------------------------DTMQPSLVYLDARSGALLE  152 (305)
T ss_pred             hhhEEEcCCCCE-EEEEcCCCccCcccCceec-Ch--------------------------hhcCCceEEEecCCCceee
Confidence            345678996544 444422       122222 11                          1111111112 23456666


Q ss_pred             e--e--eccccceeeeeeCCCCC
Q psy6415         154 E--A--TLSSQPINSLDWSADKL  172 (174)
Q Consensus       154 ~--~--~~h~~~V~~l~~spd~~  172 (174)
                      .  +  .-|+..|+=|++++||.
T Consensus       153 q~~Lp~~~~~lSiRHLa~~~~G~  175 (305)
T PF07433_consen  153 QVELPPDLHQLSIRHLAVDGDGT  175 (305)
T ss_pred             eeecCccccccceeeEEecCCCc
Confidence            6  4  34889999999999874

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=95.86  E-value=0.52  Score=36.77  Aligned_cols=95  Identities=15%  Similarity=0.169  Sum_probs=56.2

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCccc-ccce-eeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHR-EKGF-AYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~-~~~~-~~~~~~~h~~~~i~~v   85 (174)
                      |.|..++.. ++.......-...+.|+|+|++   +.| ++-+..+.|..+|+..... .... ....+..-.+ ..-.+
T Consensus       115 g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg---~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g-~pDG~  189 (246)
T PF08450_consen  115 GSVYRIDPD-GKVTVVADGLGFPNGIAFSPDG---KTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPG-YPDGL  189 (246)
T ss_dssp             EEEEEEETT-SEEEEEEEEESSEEEEEEETTS---SEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSC-EEEEE
T ss_pred             cceEEECCC-CeEEEEecCcccccceEECCcc---hheeecccccceeEEEeccccccceeeeeeEEEcCCCCc-CCCcc
Confidence            345555555 4433333333557899999974   555 5778899999999974321 1100 1111112112 35578


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++.+ ++.++++.-..+.|..+|-
T Consensus       190 ~vD~-~G~l~va~~~~~~I~~~~p  212 (246)
T PF08450_consen  190 AVDS-DGNLWVADWGGGRIVVFDP  212 (246)
T ss_dssp             EEBT-TS-EEEEEETTTEEEEEET
T ss_pred             eEcC-CCCEEEEEcCCCEEEEECC
Confidence            8888 4567777777888888887

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG2444|consensus

Probab=95.70  E-value=0.035  Score=43.53  Aligned_cols=99  Identities=9%  Similarity=0.122  Sum_probs=56.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEE---EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW---ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~---~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      |+.|..||.|++|.+.......   ........+.|.--.   +.+...++..||.||.|++.....+. +.    -.|+
T Consensus        73 ~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~---~~~~~c~~~~dg~ir~~n~~p~k~~g-~~----g~h~  144 (238)
T KOG2444|consen   73 LMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGR---DSSLGCVGAQDGRIRACNIKPNKVLG-YV----GQHN  144 (238)
T ss_pred             EEeecccceEEEecCCccchHHHhhhcccccceecccccc---ccceeEEeccCCceeeeccccCceee-ee----cccc
Confidence            6789999999999987321110   011112223332222   23567789999999999987654321 11    1333


Q ss_pred             cCcEEEEEEcCCCCCEEEEE--cCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTC--GGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~--s~Dg~V~lWd~  109 (174)
                      .-++-....+- ....++.+  |.|..++.|++
T Consensus       145 ~~~~e~~ivv~-sd~~i~~a~~S~d~~~k~W~v  176 (238)
T KOG2444|consen  145 FESGEELIVVG-SDEFLKIADTSHDRVLKKWNV  176 (238)
T ss_pred             CCCcceeEEec-CCceEEeeccccchhhhhcch
Confidence            11333332333 23466777  88888888888

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=95.67  E-value=0.4  Score=39.84  Aligned_cols=96  Identities=14%  Similarity=0.161  Sum_probs=60.2

Q ss_pred             cEEEEECCCCCeEEE----eecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcc-ccccee-eeeecc---cCc
Q psy6415          10 DLKMFDLKTMSLKWE----TNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLH-REKGFA-YLSEKA---HKA   79 (174)
Q Consensus        10 ~iklWDl~~~~~~~~----~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~-~~~~~~-~~~~~~---h~~   79 (174)
                      .|.+|++..|.+...    .....+-+-|.|+|++   ... +.+-.+++|-+|...... .....+ +.++..   ...
T Consensus       168 ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~---k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~  244 (346)
T COG2706         168 RIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNG---KYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTN  244 (346)
T ss_pred             eEEEEEcccCccccccccccCCCCCcceEEEcCCC---cEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCC
Confidence            577888877765432    2234667889999974   443 467899999999998741 001110 111111   122


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       ..-.|..+|+++-+.||--....|-++.+
T Consensus       245 -~~aaIhis~dGrFLYasNRg~dsI~~f~V  273 (346)
T COG2706         245 -WAAAIHISPDGRFLYASNRGHDSIAVFSV  273 (346)
T ss_pred             -ceeEEEECCCCCEEEEecCCCCeEEEEEE
Confidence             45678999977666666666668888877

>KOG1008|consensus

Probab=95.58  E-value=0.0041  Score=55.07  Aligned_cols=102  Identities=15%  Similarity=0.270  Sum_probs=62.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEE-CCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFD-LKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD-~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|.+|.....|+++|+|........-...-|..+..+|..  ++++++-+ |+.|.+|| .++-+..    +.++...+.
T Consensus       168 lvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~--~nY~cs~~-dg~iAiwD~~rnienp----l~~i~~~~N  240 (783)
T KOG1008|consen  168 LVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFS--PNYFCSNS-DGDIAIWDTYRNIENP----LQIILRNEN  240 (783)
T ss_pred             hhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCC--CCceeccc-cCceeeccchhhhccH----HHHHhhCCC
Confidence            3567888888999999854321111111224445555632  36777665 99999999 5553311    111111111


Q ss_pred             ---CcEEEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415          80 ---TTVWAAKHLPQNRDLFVTCGGS-GSLNLWQL  109 (174)
Q Consensus        80 ---~~i~~v~fsP~~~~~las~s~D-g~V~lWd~  109 (174)
                         +.+..++|.|....++|+.+.| ++|+++|+
T Consensus       241 ~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi  274 (783)
T KOG1008|consen  241 KKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDI  274 (783)
T ss_pred             CcccceeeEEeccCCcchhhhhccCcceEEEecc
Confidence               1488999999877788888765 68999998

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=95.57  E-value=0.063  Score=31.58  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=28.0

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK   61 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~   61 (174)
                      ....|..++|+|.   .+.||.++.||.|.|+.+.
T Consensus        10 l~~~v~~~~w~P~---mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   10 LPSRVSCMSWCPT---MDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCcEEEEEECCC---CCEEEEEECCCeEEEEECC
Confidence            4567999999996   4899999999999999884

>KOG1912|consensus

Probab=95.51  E-value=0.24  Score=45.21  Aligned_cols=102  Identities=14%  Similarity=0.136  Sum_probs=70.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecC--CCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDR--RDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~--~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      .||++...|.|.|||...+..+..+.+ ...|..+.|=+  ++ +.+.|++-..-++|-+|+..+++..=.+    -.+|
T Consensus        81 liAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~-Srd~LlaIh~ss~lvLwntdtG~k~Wk~----~ys~  155 (1062)
T KOG1912|consen   81 LIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDD-SRDVLLAIHGSSTLVLWNTDTGEKFWKY----DYSH  155 (1062)
T ss_pred             eEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCc-chheeEEecCCcEEEEEEccCCceeecc----ccCC
Confidence            478899999999999988776554443 33444444422  22 2356777788899999999887632111    1133


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       . ...++++-|++...|.--+..|.|-+-+.
T Consensus       156 -~-iLs~f~~DPfd~rh~~~l~s~g~vl~~~~  185 (1062)
T KOG1912|consen  156 -E-ILSCFRVDPFDSRHFCVLGSKGFVLSCKD  185 (1062)
T ss_pred             -c-ceeeeeeCCCCcceEEEEccCceEEEEec
Confidence             2 45669999999988888888898888777

>KOG3617|consensus

Probab=95.48  E-value=0.021  Score=52.37  Aligned_cols=92  Identities=14%  Similarity=0.155  Sum_probs=65.1

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      -|.|.|+ ..+|+.......+-.+.|+.|+|..   -.|+.|=.-|.+.+|...+.+..     .....|+. +|.-+.|
T Consensus        40 ~GSVtIf-adtGEPqr~Vt~P~hatSLCWHpe~---~vLa~gwe~g~~~v~~~~~~e~h-----tv~~th~a-~i~~l~w  109 (1416)
T KOG3617|consen   40 GGSVTIF-ADTGEPQRDVTYPVHATSLCWHPEE---FVLAQGWEMGVSDVQKTNTTETH-----TVVETHPA-PIQGLDW  109 (1416)
T ss_pred             CceEEEE-ecCCCCCcccccceehhhhccChHH---HHHhhccccceeEEEecCCceee-----eeccCCCC-CceeEEe
Confidence            4566666 4455543322223336789999952   45677878899999988765421     12247888 9999999


Q ss_pred             cCCCCCEEEEEcCCCcEEEEecc
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      || ++..+.|+..=|.|.+|.+.
T Consensus       110 S~-~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen  110 SH-DGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             cC-CCCeEEEcCCCceeEEEEee
Confidence            99 56789999999999999984

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=95.44  E-value=0.16  Score=38.93  Aligned_cols=91  Identities=18%  Similarity=0.220  Sum_probs=54.3

Q ss_pred             cCCcEEEEECCCCCeEEEeecC---CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc-CcCcE
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLK---NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH-KATTV   82 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~---~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h-~~~~i   82 (174)
                      ++|+|..||+++|+.++.....   .......+..    +..+++++.++.|..||..+++.+-.+.   +... .. . 
T Consensus         1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~l~~~d~~tG~~~W~~~---~~~~~~~-~-   71 (238)
T PF13360_consen    1 DDGTLSALDPRTGKELWSYDLGPGIGGPVATAVPD----GGRVYVASGDGNLYALDAKTGKVLWRFD---LPGPISG-A-   71 (238)
T ss_dssp             -TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEE----TTEEEEEETTSEEEEEETTTSEEEEEEE---CSSCGGS-G-
T ss_pred             CCCEEEEEECCCCCEEEEEECCCCCCCccceEEEe----CCEEEEEcCCCEEEEEECCCCCEEEEee---ccccccc-e-
Confidence            4799999999999999887542   2222112211    2678888999999999998875332111   1111 11 1 


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                        . ... ++.+ ..++.|+.|..+|.++
T Consensus        72 --~-~~~-~~~v-~v~~~~~~l~~~d~~t   95 (238)
T PF13360_consen   72 --P-VVD-GGRV-YVGTSDGSLYALDAKT   95 (238)
T ss_dssp             --E-EEE-TTEE-EEEETTSEEEEEETTT
T ss_pred             --e-eec-cccc-ccccceeeeEecccCC
Confidence              1 111 3334 4455777888888744

...

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=95.08  E-value=0.2  Score=43.07  Aligned_cols=90  Identities=13%  Similarity=0.196  Sum_probs=56.2

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCc--EEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAK--LFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~--I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .+.++|+++++..........-..-+|+|++   .+| ++...|+.  |.+.|+++....+      + .+..+.-..=.
T Consensus       219 ~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG---~~l~f~~~rdg~~~iy~~dl~~~~~~~------L-t~~~gi~~~Ps  288 (425)
T COG0823         219 RIYYLDLNTGKRPVILNFNGNNGAPAFSPDG---SKLAFSSSRDGSPDIYLMDLDGKNLPR------L-TNGFGINTSPS  288 (425)
T ss_pred             eEEEEeccCCccceeeccCCccCCccCCCCC---CEEEEEECCCCCccEEEEcCCCCccee------c-ccCCccccCcc
Confidence            4888899888765444433334456899985   555 46667776  5566776654211      1 11110112457


Q ss_pred             EcCCCCCEEEEEcCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |+|++..+..+.+..|.=+||-+
T Consensus       289 ~spdG~~ivf~Sdr~G~p~I~~~  311 (425)
T COG0823         289 WSPDGSKIVFTSDRGGRPQIYLY  311 (425)
T ss_pred             CCCCCCEEEEEeCCCCCcceEEE
Confidence            99988888788888888777766

>KOG2314|consensus

Probab=94.98  E-value=0.14  Score=44.91  Aligned_cols=65  Identities=20%  Similarity=0.332  Sum_probs=47.2

Q ss_pred             EEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-----------
Q psy6415          32 CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG-----------  100 (174)
Q Consensus        32 ~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~-----------  100 (174)
                      +-|.|||.|   .+|+|=-.-| |.+|--.+-..++.|      .|++  |.-+.||| +..+|+|=|.           
T Consensus       214 tyv~wSP~G---TYL~t~Hk~G-I~lWGG~~f~r~~RF------~Hp~--Vq~idfSP-~EkYLVT~s~~p~~~~~~d~e  280 (698)
T KOG2314|consen  214 TYVRWSPKG---TYLVTFHKQG-IALWGGESFDRIQRF------YHPG--VQFIDFSP-NEKYLVTYSPEPIIVEEDDNE  280 (698)
T ss_pred             eeEEecCCc---eEEEEEeccc-eeeecCccHHHHHhc------cCCC--ceeeecCC-ccceEEEecCCccccCcccCC
Confidence            468899974   7888876665 678976654433333      6765  88899999 6778888653           


Q ss_pred             CCcEEEEec
Q psy6415         101 SGSLNLWQL  109 (174)
Q Consensus       101 Dg~V~lWd~  109 (174)
                      -..+.|||+
T Consensus       281 ~~~l~IWDI  289 (698)
T KOG2314|consen  281 GQQLIIWDI  289 (698)
T ss_pred             CceEEEEEc
Confidence            257899999

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=94.91  E-value=0.45  Score=42.81  Aligned_cols=98  Identities=12%  Similarity=0.253  Sum_probs=62.9

Q ss_pred             CCcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC-----cccc-cceeeeeecccCc
Q psy6415           8 NGDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT-----LHRE-KGFAYLSEKAHKA   79 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~-----~~~~-~~~~~~~~~~h~~   79 (174)
                      -.++.|||.+.+.+.+....  .+.|..++|.... +++.+++-+-.+.|.|+--..     ..+. .......+..|+.
T Consensus        50 ~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~-d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~  128 (631)
T PF12234_consen   50 RSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTP-DGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTP  128 (631)
T ss_pred             CCEEEEEEcCCcEEEEeeeecCCCceeeceeeecC-CCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCC
Confidence            45789999999987765444  6789999997643 468899999999999986421     1110 0001112334442


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -+|.+..|.+ ++.+++ |++ ..+.|+|-
T Consensus       129 h~Igds~Wl~-~G~LvV-~sG-Nqlfv~dk  155 (631)
T PF12234_consen  129 HPIGDSIWLK-DGTLVV-GSG-NQLFVFDK  155 (631)
T ss_pred             CCccceeEec-CCeEEE-EeC-CEEEEECC
Confidence            2788899998 454444 332 35777776

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG0882|consensus

Probab=94.82  E-value=0.56  Score=40.41  Aligned_cols=101  Identities=20%  Similarity=0.181  Sum_probs=65.4

Q ss_pred             EEEEec-CCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEE-EeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           2 VVAGYD-NGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVA-TTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~-Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s-~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      .+|+++ |..+|++|+..-.....   ...+..++.+ .+|.+. -..|+. .-.++.|-|+|-+...|...   +.-.-
T Consensus        68 ~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv-~skGd~-~s~IAVs~~~sg~i~VvD~~~d~~q~~---~fkkl  142 (558)
T KOG0882|consen   68 FRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWV-TSKGDK-ISLIAVSLFKSGKIFVVDGFGDFCQDG---YFKKL  142 (558)
T ss_pred             EeeccCcccceeEEEeeccchhhhcccccCCCceEEe-cCCCCe-eeeEEeecccCCCcEEECCcCCcCccc---eeccc
Confidence            467677 99999999876544311   1123333333 333210 113433 34788999999887554321   12235


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.. +|-.+.++| -...+.|....|.|..|..
T Consensus       143 H~s-PV~~i~y~q-a~Ds~vSiD~~gmVEyWs~  173 (558)
T KOG0882|consen  143 HFS-PVKKIRYNQ-AGDSAVSIDISGMVEYWSA  173 (558)
T ss_pred             ccC-ceEEEEeec-cccceeeccccceeEeecC
Confidence            778 999999999 4567888888999999999

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=94.80  E-value=0.54  Score=37.99  Aligned_cols=28  Identities=29%  Similarity=0.553  Sum_probs=26.3

Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|..+..|| ++.+||+...+|.|.||++
T Consensus       231 ~i~kmSlSP-dg~~La~ih~sG~lsLW~i  258 (282)
T PF15492_consen  231 GIFKMSLSP-DGSLLACIHFSGSLSLWEI  258 (282)
T ss_pred             ceEEEEECC-CCCEEEEEEcCCeEEEEec
Confidence            799999999 5679999999999999999

>KOG3621|consensus

Probab=94.78  E-value=0.14  Score=46.03  Aligned_cols=61  Identities=13%  Similarity=0.172  Sum_probs=44.1

Q ss_pred             CCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          43 MNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        43 ~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+|+.|+.-|.+.+|.-..+..+    ..+..+-.+ .+..+..|++ ..+.|.|+..|.|.++-+
T Consensus        45 ~~~l~~GsS~G~lyl~~R~~~~~~----~~~~~~~~~-~~~~~~vs~~-e~lvAagt~~g~V~v~ql  105 (726)
T KOG3621|consen   45 EEYLAMGSSAGSVYLYNRHTGEMR----KLKNEGATG-ITCVRSVSSV-EYLVAAGTASGRVSVFQL  105 (726)
T ss_pred             CceEEEecccceEEEEecCchhhh----cccccCccc-eEEEEEecch-hHhhhhhcCCceEEeehh
Confidence            378999999999999997665422    112222333 5566778884 568899999999999888

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.73  E-value=0.12  Score=29.89  Aligned_cols=29  Identities=21%  Similarity=0.310  Sum_probs=26.1

Q ss_pred             cEEEEEEcCCCC--CEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNR--DLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~--~~las~s~Dg~V~lWd~  109 (174)
                      +|.+++|+|...  .+||-+-.-|.|.|+|+
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~   32 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDT   32 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEc
Confidence            789999998655  69999999999999999

It contains a characteristic DLL sequence motif.

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=94.72  E-value=0.5  Score=39.70  Aligned_cols=93  Identities=10%  Similarity=-0.031  Sum_probs=50.4

Q ss_pred             EEEecCCcEEEEECCCCCeEEEeec-C-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWETNL-K-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~~~-~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ..++.||.|...|.++|+.++.... . ....+....     ++.|+.++.||.|...|.++++.+-.+     +-... 
T Consensus       298 y~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~-----~g~l~v~~~~G~l~~ld~~tG~~~~~~-----~~~~~-  366 (394)
T PRK11138        298 YLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLY-----NGYLVVGDSEGYLHWINREDGRFVAQQ-----KVDSS-  366 (394)
T ss_pred             EEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEE-----CCEEEEEeCCCEEEEEECCCCCEEEEE-----EcCCC-
Confidence            3445566666666666665543221 1 111111111     267888999999999999887643211     11112 


Q ss_pred             cEEE-EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWA-AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~-v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+++ ..+.  ++ .|..++.||.|..+++
T Consensus       367 ~~~s~P~~~--~~-~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        367 GFLSEPVVA--DD-KLLIQARDGTVYAITR  393 (394)
T ss_pred             cceeCCEEE--CC-EEEEEeCCceEEEEeC
Confidence            2332 1121  44 4555788999888765

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.52  E-value=0.18  Score=29.14  Aligned_cols=33  Identities=12%  Similarity=0.152  Sum_probs=26.7

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      .|.++.|+|.....+.|+.+-.-+.|.|+|+|+
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            588999998642226788888889999999995

It contains a characteristic DLL sequence motif.

>KOG2114|consensus

Probab=94.25  E-value=1.5  Score=40.54  Aligned_cols=99  Identities=9%  Similarity=0.213  Sum_probs=62.8

Q ss_pred             CEEEEecCCcEEEEE--C-CC-C-CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           1 MVVAGYDNGDLKMFD--L-KT-M-SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         1 ~lasgs~Dg~iklWD--l-~~-~-~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      .||.|..||.|.++.  + |. + +........++|+.++|..++   ..++-+..-..|.+|.+.+..+.    ...+.
T Consensus       139 ~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~---~s~lFv~Tt~~V~~y~l~gr~p~----~~~ld  211 (933)
T KOG2114|consen  139 TIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDG---KSVLFVATTEQVMLYSLSGRTPS----LKVLD  211 (933)
T ss_pred             EEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCC---ceeEEEEecceeEEEEecCCCcc----eeeec
Confidence            478999999999883  2 11 1 122223346789999998764   44222223357899999865422    22345


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|.. ++++.+|++-.+++++ |+. .-|.+|+.
T Consensus       212 ~~G~-~lnCss~~~~t~qfIc-a~~-e~l~fY~s  242 (933)
T KOG2114|consen  212 NNGI-SLNCSSFSDGTYQFIC-AGS-EFLYFYDS  242 (933)
T ss_pred             cCCc-cceeeecCCCCccEEE-ecC-ceEEEEcC
Confidence            6666 9999999985443444 443 36899988

>PRK02888 nitrous-oxide reductase; Validated

Probab=94.00  E-value=0.87  Score=40.95  Aligned_cols=57  Identities=9%  Similarity=0.041  Sum_probs=37.5

Q ss_pred             CCcEEEEECCCcccc-cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          52 EAKLFVFDLKTLHRE-KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        52 Dg~I~iWD~~~~~~~-~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      +++|.+.|.++..+. ..+ ...+.- .. ..+.|+++|++..+++++..+.+|.+.|+++
T Consensus       295 gn~V~VID~~t~~~~~~~v-~~yIPV-GK-sPHGV~vSPDGkylyVanklS~tVSVIDv~k  352 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSAL-TRYVPV-PK-NPHGVNTSPDGKYFIANGKLSPTVTVIDVRK  352 (635)
T ss_pred             CCEEEEEECCccccCCcce-EEEEEC-CC-CccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence            456888888761000 001 111111 12 5689999998888888889999999999944

>KOG2395|consensus

Probab=93.90  E-value=0.35  Score=42.43  Aligned_cols=94  Identities=14%  Similarity=0.146  Sum_probs=61.2

Q ss_pred             EEecCCcEEEEECCCCCe---EEEe----ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           4 AGYDNGDLKMFDLKTMSL---KWET----NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~---~~~~----~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      .|-+|..|.=||+|-+..   ....    .-+....|.+-..+    .+||.||.+|.|||||- .....++    -+.+
T Consensus       399 vGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~s----G~IvvgS~~GdIRLYdr-i~~~AKT----AlPg  469 (644)
T KOG2395|consen  399 VGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTES----GYIVVGSLKGDIRLYDR-IGRRAKT----ALPG  469 (644)
T ss_pred             EeecCCceEEecccccCcceeeeeeccccccccccceeeecCC----ceEEEeecCCcEEeehh-hhhhhhh----cccc
Confidence            577889999999984432   1111    12344566665543    57999999999999996 3221111    1234


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -.. +|..|..+.++.-+||||  +..+-|-++
T Consensus       470 LG~-~I~hVdvtadGKwil~Tc--~tyLlLi~t  499 (644)
T KOG2395|consen  470 LGD-AIKHVDVTADGKWILATC--KTYLLLIDT  499 (644)
T ss_pred             cCC-ceeeEEeeccCcEEEEec--ccEEEEEEE
Confidence            556 899998888666566554  557888777

>PRK02888 nitrous-oxide reductase; Validated

Probab=93.89  E-value=0.34  Score=43.45  Aligned_cols=101  Identities=12%  Similarity=0.153  Sum_probs=68.2

Q ss_pred             CCcEEEEECCC-----CCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccc-------cceeeeee
Q psy6415           8 NGDLKMFDLKT-----MSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHRE-------KGFAYLSE   74 (174)
Q Consensus         8 Dg~iklWDl~~-----~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~-------~~~~~~~~   74 (174)
                      +++|.+.|.++     ...............|+++|++   .++ +++..+.+|.|.|+++....       +.......
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDG---kylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaev  371 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDG---KYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEP  371 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEECCCCccceEECCCC---CEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEee
Confidence            46799999988     3455555556677889999985   555 56678999999999885420       00001111


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR  114 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~  114 (174)
                      +--.+ + ...+|.++ +..+.|---|..|--||++.+.|
T Consensus       372 evGlG-P-LHTaFDg~-G~aytslf~dsqv~kwn~~~a~~  408 (635)
T PRK02888        372 ELGLG-P-LHTAFDGR-GNAYTTLFLDSQIVKWNIEAAIR  408 (635)
T ss_pred             ccCCC-c-ceEEECCC-CCEEEeEeecceeEEEehHHHHH
Confidence            11112 3 46789885 56888888999999999966444

>KOG2114|consensus

Probab=93.86  E-value=1  Score=41.64  Aligned_cols=103  Identities=13%  Similarity=0.106  Sum_probs=57.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCC-EEEEEecCCCCCCCEEEEEeCCCc-----EEEEECCCccccc---ce---
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNG-VCGVDFDRRDIPMNKLVATTLEAK-----LFVFDLKTLHREK---GF---   69 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~-V~sv~f~~~~~~~~~l~s~s~Dg~-----I~iWD~~~~~~~~---~~---   69 (174)
                      ||-|+.||.|-+.+-+-........+... |..+-...   ..+.|++-++|..     |+|||+...+...   -+   
T Consensus        38 vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~---~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~  114 (933)
T KOG2114|consen   38 VVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILN---KQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEH  114 (933)
T ss_pred             EEEeeccccEEEecccceeeehheecchhhhhHhhccc---CceEEEEEeecCCCCceEEEEecccccCCCCCcceeeee
Confidence            56677777776655332211111222333 33332221   1367888776654     9999997542111   11   


Q ss_pred             eeeeecc--cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          70 AYLSEKA--HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~~--h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++..  -+. ++.+++.|-+ -..+|.|=.||.|.++.=
T Consensus       115 ri~~~~np~~~~-p~s~l~Vs~~-l~~Iv~Gf~nG~V~~~~G  154 (933)
T KOG2114|consen  115 RIFTIKNPTNPS-PASSLAVSED-LKTIVCGFTNGLVICYKG  154 (933)
T ss_pred             eeeccCCCCCCC-cceEEEEEcc-ccEEEEEecCcEEEEEcC
Confidence            1112111  133 6778888874 567898999999998864

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=93.79  E-value=0.92  Score=41.40  Aligned_cols=103  Identities=14%  Similarity=0.237  Sum_probs=68.5

Q ss_pred             CEEEEecCCcEEEEECCC-------C-------C------eEEEeecCCCEEEEEec--CCCCCCCEEEEEeCCCcEEEE
Q psy6415           1 MVVAGYDNGDLKMFDLKT-------M-------S------LKWETNLKNGVCGVDFD--RRDIPMNKLVATTLEAKLFVF   58 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~-------~-------~------~~~~~~~~~~V~sv~f~--~~~~~~~~l~s~s~Dg~I~iW   58 (174)
                      +|+.+.+||.|.+|-+++       .       .      .-+.......+.+++++  ..   .+.||.++.-..|.||
T Consensus       116 VLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~---~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  116 VLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKK---SRLIAVSSNSQEVTVF  192 (717)
T ss_pred             EEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCc---ceEEEEecCCceEEEE
Confidence            478999999999996521       0       0      11223345678999998  53   3678888888999988


Q ss_pred             ECCCcccccceeeeeecccCcCcEEEEEEcCCC--CC---EEEEEcCCCcEEEEec
Q psy6415          59 DLKTLHREKGFAYLSEKAHKATTVWAAKHLPQN--RD---LFVTCGGSGSLNLWQL  109 (174)
Q Consensus        59 D~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~--~~---~las~s~Dg~V~lWd~  109 (174)
                      =....... .+.... ..|.. -|-+|+|.+++  +.   .+++++=.|.|-+|++
T Consensus       193 af~l~~~r-~~~~~s-~~~~h-NIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDER-FYHVPS-HQHSH-NIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEeccccc-cccccc-ccccc-CCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            76653111 111001 12333 57899998864  22   7888999999999998

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=93.73  E-value=3.7  Score=34.59  Aligned_cols=98  Identities=15%  Similarity=0.141  Sum_probs=67.7

Q ss_pred             EEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe--CCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT--LEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s--~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++...++.|.+.|..+..+.........-..++++|++  ....++-.  .+++|.+.|-.+.....     +...-.. 
T Consensus        90 v~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~--~~vYV~n~~~~~~~vsvid~~t~~~~~-----~~~vG~~-  161 (381)
T COG3391          90 VTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDG--KYVYVANAGNGNNTVSVIDAATNKVTA-----TIPVGNT-  161 (381)
T ss_pred             EecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCC--CEEEEEecccCCceEEEEeCCCCeEEE-----EEecCCC-
Confidence            34445788889888777766554444456788999975  23344444  47899999988765332     2222223 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      + ..+++.|.+..++++-..+++|.+.|.
T Consensus       162 P-~~~a~~p~g~~vyv~~~~~~~v~vi~~  189 (381)
T COG3391         162 P-TGVAVDPDGNKVYVTNSDDNTVSVIDT  189 (381)
T ss_pred             c-ceEEECCCCCeEEEEecCCCeEEEEeC
Confidence            5 789999977768888889999999998

>KOG2079|consensus

Probab=93.73  E-value=0.21  Score=46.91  Aligned_cols=60  Identities=13%  Similarity=0.244  Sum_probs=45.6

Q ss_pred             CEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          44 NKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        44 ~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -.++.|+.-|.|-..|++++-+    ..+.-..-++ +|.+++|+- ++.+++.|=.+|-|.+||+
T Consensus       100 ~~ivi~Ts~ghvl~~d~~~nL~----~~~~ne~v~~-~Vtsvafn~-dg~~l~~G~~~G~V~v~D~  159 (1206)
T KOG2079|consen  100 VPIVIGTSHGHVLLSDMTGNLG----PLHQNERVQG-PVTSVAFNQ-DGSLLLAGLGDGHVTVWDM  159 (1206)
T ss_pred             eeEEEEcCchhhhhhhhhcccc----hhhcCCccCC-cceeeEecC-CCceeccccCCCcEEEEEc
Confidence            4689999999999999887311    0011112234 899999998 6778899999999999999

>KOG1832|consensus

Probab=93.61  E-value=0.12  Score=47.87  Aligned_cols=76  Identities=16%  Similarity=0.212  Sum_probs=57.7

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC-cEE
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG-SLN  105 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg-~V~  105 (174)
                      +....++++|+...   +.|+.|+-.|.||++++.++....     ....|+. +|.-|.-+.++...|-+++... -..
T Consensus      1100 ~~~~fTc~afs~~~---~hL~vG~~~Geik~~nv~sG~~e~-----s~ncH~S-avT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1100 ETALFTCIAFSGGT---NHLAVGSHAGEIKIFNVSSGSMEE-----SVNCHQS-AVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred             cccceeeEEeecCC---ceEEeeeccceEEEEEccCccccc-----ccccccc-ccccccccCCcceeeeeccccCchHH
Confidence            34668899999864   889999999999999999875432     2248998 9999988886655555555554 577


Q ss_pred             EEeccc
Q psy6415         106 LWQLVS  111 (174)
Q Consensus       106 lWd~~~  111 (174)
                      ||++.+
T Consensus      1171 LW~~~s 1176 (1516)
T KOG1832|consen 1171 LWDASS 1176 (1516)
T ss_pred             Hhcccc
Confidence            999944

>KOG1920|consensus

Probab=93.46  E-value=3.5  Score=39.62  Aligned_cols=55  Identities=20%  Similarity=0.314  Sum_probs=42.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEE
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFD   59 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD   59 (174)
                      |+.+..+|.|.+-|..+......-....+|.+++|+|+.   +.++..+.+.++-+-+
T Consensus        83 i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~De---e~l~liT~~~tll~mT  137 (1265)
T KOG1920|consen   83 ICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDE---ELLALITGRQTLLFMT  137 (1265)
T ss_pred             EEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCC---cEEEEEeCCcEEEEEe
Confidence            455677899999999888776555567899999999974   7888888888875543

>KOG1832|consensus

Probab=93.43  E-value=0.25  Score=45.93  Aligned_cols=35  Identities=23%  Similarity=0.419  Sum_probs=24.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEE
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVD   35 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~   35 (174)
                      .|+.|+..|.||++++.+|...-..+ |...|+-|.
T Consensus      1115 hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~ve 1150 (1516)
T KOG1832|consen 1115 HLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVE 1150 (1516)
T ss_pred             eEEeeeccceEEEEEccCcccccccccccccccccc
Confidence            37889999999999999987654433 334444443

>KOG3617|consensus

Probab=93.43  E-value=0.091  Score=48.40  Aligned_cols=90  Identities=12%  Similarity=0.147  Sum_probs=58.6

Q ss_pred             EEecCCCCCCCEEEEEe----CCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          34 VDFDRRDIPMNKLVATT----LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        34 v~f~~~~~~~~~l~s~s----~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++|+|..   ..+|.++    ..|.|-||- .++++.+..      ..+- .+.++.||| ..-+||.|=+-|.+.+|..
T Consensus        21 ~SWHPse---PlfAVA~fS~er~GSVtIfa-dtGEPqr~V------t~P~-hatSLCWHp-e~~vLa~gwe~g~~~v~~~   88 (1416)
T KOG3617|consen   21 SSWHPSE---PLFAVASFSPERGGSVTIFA-DTGEPQRDV------TYPV-HATSLCWHP-EEFVLAQGWEMGVSDVQKT   88 (1416)
T ss_pred             cccCCCC---ceeEEEEecCCCCceEEEEe-cCCCCCccc------ccce-ehhhhccCh-HHHHHhhccccceeEEEec
Confidence            4688853   5666553    567888884 444432211      1111 345799999 5678999999999999988


Q ss_pred             cccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         110 VSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      .                            +         -+.--....|..+|.-+.|||||.
T Consensus        89 ~----------------------------~---------~e~htv~~th~a~i~~l~wS~~G~  114 (1416)
T KOG3617|consen   89 N----------------------------T---------TETHTVVETHPAPIQGLDWSHDGT  114 (1416)
T ss_pred             C----------------------------C---------ceeeeeccCCCCCceeEEecCCCC
Confidence            1                            0         111222346889999999999985

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=93.00  E-value=4.6  Score=33.91  Aligned_cols=94  Identities=18%  Similarity=0.206  Sum_probs=56.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |..++.+|.+...|+++|+.++...... ...+...     ++.|..++.|+.|..+|.++++.+=...  .. .+ . .
T Consensus       259 vy~~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~~~-----~~~vy~~~~~g~l~ald~~tG~~~W~~~--~~-~~-~-~  327 (394)
T PRK11138        259 VYALAYNGNLVALDLRSGQIVWKREYGS-VNDFAVD-----GGRIYLVDQNDRVYALDTRGGVELWSQS--DL-LH-R-L  327 (394)
T ss_pred             EEEEEcCCeEEEEECCCCCEEEeecCCC-ccCcEEE-----CCEEEEEcCCCeEEEEECCCCcEEEccc--cc-CC-C-c
Confidence            4456778999999999999887654322 1122222     2678888899999999998765320000  00 00 0 1


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+....  ++ .+..++.||.|...|.
T Consensus       328 ~~sp~v~--~g-~l~v~~~~G~l~~ld~  352 (394)
T PRK11138        328 LTAPVLY--NG-YLVVGDSEGYLHWINR  352 (394)
T ss_pred             ccCCEEE--CC-EEEEEeCCCEEEEEEC
Confidence            1111121  33 4566888999999888

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=92.08  E-value=2.6  Score=34.33  Aligned_cols=95  Identities=13%  Similarity=0.113  Sum_probs=62.4

Q ss_pred             ecCCcEEEEECCCCC-eEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           6 YDNGDLKMFDLKTMS-LKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         6 s~Dg~iklWDl~~~~-~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      +..+.|.+|+++..+ +.....  ..-.+.++....     ++|+.|.....|.++..+....  .+....-..... .+
T Consensus       104 ~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~-----~~I~vgD~~~sv~~~~~~~~~~--~l~~va~d~~~~-~v  175 (321)
T PF03178_consen  104 AVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFK-----NYILVGDAMKSVSLLRYDEENN--KLILVARDYQPR-WV  175 (321)
T ss_dssp             EETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEET-----TEEEEEESSSSEEEEEEETTTE---EEEEEEESS-B-EE
T ss_pred             eecCEEEEEEccCcccchhhheecceEEEEEEeccc-----cEEEEEEcccCEEEEEEEccCC--EEEEEEecCCCc-cE
Confidence            345899999998877 544322  234577776653     7899999888898885544211  111111112233 68


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .++.|-+++ ..++.+..+|.|.++..
T Consensus       176 ~~~~~l~d~-~~~i~~D~~gnl~~l~~  201 (321)
T PF03178_consen  176 TAAEFLVDE-DTIIVGDKDGNLFVLRY  201 (321)
T ss_dssp             EEEEEE-SS-SEEEEEETTSEEEEEEE
T ss_pred             EEEEEecCC-cEEEEEcCCCeEEEEEE
Confidence            889998755 58899999999999988

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=91.83  E-value=2.1  Score=33.44  Aligned_cols=74  Identities=16%  Similarity=0.087  Sum_probs=48.3

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce-eeeeec--------ccCcCcEEEEEEcCCCCCEEEEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF-AYLSEK--------AHKATTVWAAKHLPQNRDLFVTC   98 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~-~~~~~~--------~h~~~~i~~v~fsP~~~~~las~   98 (174)
                      ...+.-+..+     +++|++-+.+|.+++||+++.++...- .+..+-        .... .|.++.++. ++.-+++=
T Consensus        12 gs~~~~l~~~-----~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~-~i~~~~lt~-~G~PiV~l   84 (219)
T PF07569_consen   12 GSPVSFLECN-----GSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSP-NITSCSLTS-NGVPIVTL   84 (219)
T ss_pred             CCceEEEEeC-----CCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCC-cEEEEEEcC-CCCEEEEE
Confidence            4455556544     378999999999999999987643111 111111        2334 688899987 45555655


Q ss_pred             cCCCcEEEEec
Q psy6415          99 GGSGSLNLWQL  109 (174)
Q Consensus        99 s~Dg~V~lWd~  109 (174)
                      + +|....|+.
T Consensus        85 s-ng~~y~y~~   94 (219)
T PF07569_consen   85 S-NGDSYSYSP   94 (219)
T ss_pred             e-CCCEEEecc
Confidence            4 578899987

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=91.44  E-value=7.9  Score=33.06  Aligned_cols=49  Identities=14%  Similarity=0.240  Sum_probs=36.0

Q ss_pred             cEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc
Q psy6415          10 DLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL   63 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~   63 (174)
                      .|+||+..+..+ .... ..+.|-++.|+.+    ..|+.-..||+++++|+...
T Consensus        62 ~I~iys~sG~ll-~~i~w~~~~iv~~~wt~~----e~LvvV~~dG~v~vy~~~G~  111 (410)
T PF04841_consen   62 SIQIYSSSGKLL-SSIPWDSGRIVGMGWTDD----EELVVVQSDGTVRVYDLFGE  111 (410)
T ss_pred             EEEEECCCCCEe-EEEEECCCCEEEEEECCC----CeEEEEEcCCEEEEEeCCCc
Confidence            588888765433 3322 2367899999874    67888889999999999753

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=91.31  E-value=4.6  Score=32.54  Aligned_cols=55  Identities=16%  Similarity=0.214  Sum_probs=35.6

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      .++...+||.++.+.+..+.....=..++.+     ++.|+.+.....|.++|..+.+..
T Consensus       108 k~~~~f~yd~~tl~~~~~~~y~~EGWGLt~d-----g~~Li~SDGS~~L~~~dP~~f~~~  162 (264)
T PF05096_consen  108 KEGTGFVYDPNTLKKIGTFPYPGEGWGLTSD-----GKRLIMSDGSSRLYFLDPETFKEV  162 (264)
T ss_dssp             SSSEEEEEETTTTEEEEEEE-SSS--EEEEC-----SSCEEEE-SSSEEEEE-TTT-SEE
T ss_pred             cCCeEEEEccccceEEEEEecCCcceEEEcC-----CCEEEEECCccceEEECCcccceE
Confidence            4677888999888777666555555666644     266877777889999998876543

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG2395|consensus

Probab=91.17  E-value=2  Score=37.95  Aligned_cols=102  Identities=12%  Similarity=0.163  Sum_probs=62.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-----EEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-----VATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-----~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      |.+|..-..++=-|+.+|+++........|+-+.+.|+. .+.+|     +.|=.|+.|--||.|-+...   .+..-++
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~-K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~---kl~~~q~  424 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDF-KFAQLTSEQTLVGLSDNSVFRIDPRVQGKN---KLAVVQS  424 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCc-chhcccccccEEeecCCceEEecccccCcc---eeeeeec
Confidence            344444555666788899888766656668888888864 23333     33557888999999854321   0111112


Q ss_pred             cCc---CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKA---TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~---~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |+-   .-..|.+-.- + ..+|.||.+|.|||||-
T Consensus       425 kqy~~k~nFsc~aTT~-s-G~IvvgS~~GdIRLYdr  458 (644)
T KOG2395|consen  425 KQYSTKNNFSCFATTE-S-GYIVVGSLKGDIRLYDR  458 (644)
T ss_pred             cccccccccceeeecC-C-ceEEEeecCCcEEeehh
Confidence            211   0234444433 3 36789999999999997

>KOG4649|consensus

Probab=91.17  E-value=3.8  Score=33.28  Aligned_cols=96  Identities=20%  Similarity=0.136  Sum_probs=64.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      ++.||..+.++--|.++|++.+..-....+.+-+.=-    ++.++.|...|.+.+-+..+++....+..  +    + +
T Consensus        26 v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vv----gdfVV~GCy~g~lYfl~~~tGs~~w~f~~--~----~-~   94 (354)
T KOG4649|consen   26 VVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVV----GDFVVLGCYSGGLYFLCVKTGSQIWNFVI--L----E-T   94 (354)
T ss_pred             EEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEE----CCEEEEEEccCcEEEEEecchhheeeeee--h----h-h
Confidence            6778999999999999999987654333333222211    37899999999999999999764332211  1    1 2


Q ss_pred             EEE-EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWA-AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~-v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |-. ...-| ++.++-.|+.|++.+.-|.
T Consensus        95 vk~~a~~d~-~~glIycgshd~~~yalD~  122 (354)
T KOG4649|consen   95 VKVRAQCDF-DGGLIYCGSHDGNFYALDP  122 (354)
T ss_pred             hccceEEcC-CCceEEEecCCCcEEEecc
Confidence            211 12233 4557788999999988887

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=90.87  E-value=2.4  Score=36.17  Aligned_cols=78  Identities=10%  Similarity=0.012  Sum_probs=49.2

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeee--ecccCcCcEEEEEEcC---C-CC---CEEEEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLS--EKAHKATTVWAAKHLP---Q-NR---DLFVTC   98 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~--~~~h~~~~i~~v~fsP---~-~~---~~las~   98 (174)
                      .+.|.+++.+.-    ..+|.|..+|.+.|.|+|.+..+....+..  +.......|.++.|..   . ++   -++..|
T Consensus        86 ~g~vtal~~S~i----GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   86 QGPVTALKNSDI----GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             S-SEEEEEE-BT----SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             CCcEeEEecCCC----cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            467889988742    588999999999999999876432211111  1111222577787762   1 22   266778


Q ss_pred             cCCCcEEEEec
Q psy6415          99 GGSGSLNLWQL  109 (174)
Q Consensus        99 s~Dg~V~lWd~  109 (174)
                      ...|.+.+|.+
T Consensus       162 Tn~G~v~~fkI  172 (395)
T PF08596_consen  162 TNSGNVLTFKI  172 (395)
T ss_dssp             ETTSEEEEEEE
T ss_pred             eCCCCEEEEEE
Confidence            88899999998

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=90.57  E-value=2  Score=36.91  Aligned_cols=73  Identities=10%  Similarity=0.135  Sum_probs=41.9

Q ss_pred             EEEecCCCCCCCEEEEEeCCCcEEE---EECCCcc-cccceee---eeecccC-cCcEEEEEEcCC----------CCCE
Q psy6415          33 GVDFDRRDIPMNKLVATTLEAKLFV---FDLKTLH-REKGFAY---LSEKAHK-ATTVWAAKHLPQ----------NRDL   94 (174)
Q Consensus        33 sv~f~~~~~~~~~l~s~s~Dg~I~i---WD~~~~~-~~~~~~~---~~~~~h~-~~~i~~v~fsP~----------~~~~   94 (174)
                      .++.+|++   +.||.|..+..+-+   |+..... ....|..   ..+.... . .|.++.+-|.          +-.+
T Consensus         6 ~isls~~~---d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e-~ITsi~clpl~s~~~s~~~~dw~~   81 (415)
T PF14655_consen    6 SISLSPDG---DLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGE-CITSILCLPLSSQKRSTGGPDWTC   81 (415)
T ss_pred             eEEecCCC---CEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCC-EEEEEEEEEeecccccCCCCCcEE
Confidence            45666653   77777777766654   6542211 1111111   1111111 3 6777766554          3468


Q ss_pred             EEEEcCCCcEEEEec
Q psy6415          95 FVTCGGSGSLNLWQL  109 (174)
Q Consensus        95 las~s~Dg~V~lWd~  109 (174)
                      +|.|-.+|.|++|..
T Consensus        82 I~VG~ssG~vrfyte   96 (415)
T PF14655_consen   82 IAVGTSSGYVRFYTE   96 (415)
T ss_pred             EEEEecccEEEEEec
Confidence            899999999999987

>KOG1916|consensus

Probab=90.10  E-value=0.22  Score=46.20  Aligned_cols=93  Identities=13%  Similarity=0.170  Sum_probs=56.4

Q ss_pred             CcEEEEECC--CCCeEEE----e--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           9 GDLKMFDLK--TMSLKWE----T--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         9 g~iklWDl~--~~~~~~~----~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |.+.+||+.  .|+++..    .  .....+.-|.|-|...+.-++-.+-.+++|++-.+.+...      ..+++|.. 
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~------~l~rsHs~-  225 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR------SLFRSHSQ-  225 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH------HHHHhcCC-
Confidence            556788875  3433221    1  1123345566665443334556667888999877765321      12235654 


Q ss_pred             cEEEE-----------EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAA-----------KHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v-----------~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..+           ..|| |+.+||+++.||.|+.|.+
T Consensus       226 ~~~d~a~~~~g~~~l~~lSp-DGtv~a~a~~dG~v~f~Qi  264 (1283)
T KOG1916|consen  226 RVTDMAFFAEGVLKLASLSP-DGTVFAWAISDGSVGFYQI  264 (1283)
T ss_pred             CcccHHHHhhchhhheeeCC-CCcEEEEeecCCccceeee
Confidence            33332           3589 6789999999999999987

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=89.48  E-value=4.3  Score=35.14  Aligned_cols=99  Identities=15%  Similarity=0.101  Sum_probs=52.0

Q ss_pred             CcEEEEECCCCCeEEEeecCC---CEEEEEecCCCCCCCEEEEEeCCCcEEEEEC-CCcccccceeeeeecc--------
Q psy6415           9 GDLKMFDLKTMSLKWETNLKN---GVCGVDFDRRDIPMNKLVATTLEAKLFVFDL-KTLHREKGFAYLSEKA--------   76 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~---~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~-~~~~~~~~~~~~~~~~--------   76 (174)
                      .++.+||+++.+.++.+....   ..-.|.|-.+.....-++.+-..++|-+|-- +..+-... .+.++..        
T Consensus       222 ~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~-kVi~ip~~~v~~~~l  300 (461)
T PF05694_consen  222 HSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAE-KVIDIPAKKVEGWIL  300 (461)
T ss_dssp             -EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEE-EEEEE--EE--SS--
T ss_pred             CeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeee-EEEECCCcccCcccc
Confidence            679999999999888776432   2445655432211223565666666666544 22221100 1111111        


Q ss_pred             ---------cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 ---------HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 ---------h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                               -.. -|..+..|.+++.+.+++=.+|.|+.||+
T Consensus       301 p~ml~~~~~~P~-LitDI~iSlDDrfLYvs~W~~GdvrqYDI  341 (461)
T PF05694_consen  301 PEMLKPFGAVPP-LITDILISLDDRFLYVSNWLHGDVRQYDI  341 (461)
T ss_dssp             -GGGGGG-EE-------EEE-TTS-EEEEEETTTTEEEEEE-
T ss_pred             cccccccccCCC-ceEeEEEccCCCEEEEEcccCCcEEEEec
Confidence                     123 57889999999999999999999999999

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=89.15  E-value=1.7  Score=23.87  Aligned_cols=21  Identities=29%  Similarity=0.569  Sum_probs=17.6

Q ss_pred             CCCCCEEEEEcCCCcEEEEec
Q psy6415          89 PQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        89 P~~~~~las~s~Dg~V~lWd~  109 (174)
                      |+++.++++.-.+++|.++|.
T Consensus         1 pd~~~lyv~~~~~~~v~~id~   21 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDT   21 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEEC
Confidence            556668888888999999998

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=88.92  E-value=4.7  Score=34.74  Aligned_cols=71  Identities=17%  Similarity=0.260  Sum_probs=46.5

Q ss_pred             CCEEEEEecCCCCCCCEEEEE---eCC-CcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcE
Q psy6415          29 NGVCGVDFDRRDIPMNKLVAT---TLE-AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSL  104 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~---s~D-g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V  104 (174)
                      ..+..-+|+|++   ..++.-   ... ..|.++|+.+....   .+.++.++..    .-+|+|++..++.+...||..
T Consensus       193 ~~~~~p~ws~~~---~~~~y~~f~~~~~~~i~~~~l~~g~~~---~i~~~~g~~~----~P~fspDG~~l~f~~~rdg~~  262 (425)
T COG0823         193 SLILTPAWSPDG---KKLAYVSFELGGCPRIYYLDLNTGKRP---VILNFNGNNG----APAFSPDGSKLAFSSSRDGSP  262 (425)
T ss_pred             cceeccccCcCC---CceEEEEEecCCCceEEEEeccCCccc---eeeccCCccC----CccCCCCCCEEEEEECCCCCc
Confidence            446666788864   555543   223 46999999986532   1222333333    457999888888888999988


Q ss_pred             EEEec
Q psy6415         105 NLWQL  109 (174)
Q Consensus       105 ~lWd~  109 (174)
                      .||=+
T Consensus       263 ~iy~~  267 (425)
T COG0823         263 DIYLM  267 (425)
T ss_pred             cEEEE
Confidence            77766

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=88.51  E-value=0.98  Score=37.67  Aligned_cols=54  Identities=22%  Similarity=0.197  Sum_probs=38.1

Q ss_pred             EEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEE-EeCCCcEEEEECCCcccc
Q psy6415          11 LKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVA-TTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus        11 iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s-~s~Dg~I~iWD~~~~~~~   66 (174)
                      |-++|+.+++.+........+.+|+.+.++  ...|.+ ...++.|.+||..+++.+
T Consensus       271 VWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~--~P~L~~~~~~~~~l~v~D~~tGk~~  325 (342)
T PF06433_consen  271 VWVYDLKTHKRVARIPLEHPIDSIAVSQDD--KPLLYALSAGDGTLDVYDAATGKLV  325 (342)
T ss_dssp             EEEEETTTTEEEEEEEEEEEESEEEEESSS--S-EEEEEETTTTEEEEEETTT--EE
T ss_pred             EEEEECCCCeEEEEEeCCCccceEEEccCC--CcEEEEEcCCCCeEEEEeCcCCcEE
Confidence            455688899887776655668899999864  245544 456899999999997643

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=88.19  E-value=11  Score=34.32  Aligned_cols=60  Identities=13%  Similarity=0.159  Sum_probs=37.9

Q ss_pred             CEEEEE-eCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEc--CCCCCEEEEEcCCCcEEEEec
Q psy6415          44 NKLVAT-TLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHL--PQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        44 ~~l~s~-s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fs--P~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+|.. +.-.++.|||.+.......   ..+ ...+ .|.++.|.  |+ ++.+.+-|..+.|.|+.-
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~~~lE~~---~~f-~~~~-~I~dLDWtst~d-~qsiLaVGf~~~v~l~~Q  103 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRSGVLEYE---ESF-SEDD-PIRDLDWTSTPD-GQSILAVGFPHHVLLYTQ  103 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCCcEEEEe---eee-cCCC-ceeeceeeecCC-CCEEEEEEcCcEEEEEEc
Confidence            455544 4455799999997642211   122 3345 79888775  54 445566778888999865

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=87.93  E-value=2  Score=37.79  Aligned_cols=36  Identities=14%  Similarity=0.142  Sum_probs=24.5

Q ss_pred             EEEEEecCCCC-CCCEEEEEeCCCcEEEEECCCcccc
Q psy6415          31 VCGVDFDRRDI-PMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus        31 V~sv~f~~~~~-~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      +.+++.+.... ....|++-+.|+++|+||+++..++
T Consensus       217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~  253 (547)
T PF11715_consen  217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCL  253 (547)
T ss_dssp             EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEE
T ss_pred             cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence            44555554110 1368889999999999999998763

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=87.90  E-value=2.1  Score=36.46  Aligned_cols=61  Identities=21%  Similarity=0.387  Sum_probs=43.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecC---------CCEEEEEecCC--CCCC---CEEEEEeCCCcEEEEECC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLK---------NGVCGVDFDRR--DIPM---NKLVATTLEAKLFVFDLK   61 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~---------~~V~sv~f~~~--~~~~---~~l~s~s~Dg~I~iWD~~   61 (174)
                      ++|.|+.+|++.|-|+|+..+++.....         ..|.++.|.--  +.++   -.|+.|+..|.+.+|.+-
T Consensus        99 Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIl  173 (395)
T PF08596_consen   99 FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKIL  173 (395)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEE
T ss_pred             EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEe
Confidence            4799999999999999988887763321         24777777510  0011   247789999999999885

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG0882|consensus

Probab=87.77  E-value=3.8  Score=35.49  Aligned_cols=103  Identities=9%  Similarity=0.018  Sum_probs=70.9

Q ss_pred             EEEecCCcEEEEECCCCCeEE---EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC-cc-cc---------cc
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKW---ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT-LH-RE---------KG   68 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~---~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~-~~-~~---------~~   68 (174)
                      ++..++|.|.++|-+...+..   ..-|...|..+.+++-   ++.+++....|.|.-|.... .+ +.         .+
T Consensus       116 Vs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa---~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eT  192 (558)
T KOG0882|consen  116 VSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQA---GDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHET  192 (558)
T ss_pred             eecccCCCcEEECCcCCcCccceecccccCceEEEEeecc---ccceeeccccceeEeecCCCcccCccccccccccccc
Confidence            344568999999988765432   2336788999999985   47888888999999999873 10 00         00


Q ss_pred             eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .+.... --.. ...++.|+|+ +..+++-+.|.+|+++++.+
T Consensus       193 dLy~f~-K~Kt-~pts~Efsp~-g~qistl~~DrkVR~F~~Kt  232 (558)
T KOG0882|consen  193 DLYGFP-KAKT-EPTSFEFSPD-GAQISTLNPDRKVRGFVFKT  232 (558)
T ss_pred             hhhccc-cccc-CccceEEccc-cCcccccCcccEEEEEEecc
Confidence            111111 1123 4578999995 55679999999999999954

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=87.68  E-value=3.3  Score=32.26  Aligned_cols=57  Identities=11%  Similarity=0.163  Sum_probs=37.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe---------------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET---------------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~---------------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      |++-..+|.+++||++++++....               .....|.++.++.+|   .-|++-+ +|....||..-
T Consensus        25 Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G---~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   25 LLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNG---VPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCC---CEEEEEe-CCCEEEecccc
Confidence            556678999999999998765432               122446677777543   4455444 46678887654

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=87.61  E-value=8.4  Score=33.57  Aligned_cols=25  Identities=24%  Similarity=0.164  Sum_probs=21.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN   26 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~   26 (174)
                      ++.++.+|.+...|.++|+.++...
T Consensus       304 V~~g~~~G~l~ald~~tG~~~W~~~  328 (488)
T cd00216         304 IVHAPKNGFFYVLDRTTGKLISARP  328 (488)
T ss_pred             EEEECCCceEEEEECCCCcEeeEeE
Confidence            5667889999999999999987653

The alignment model contains an 8-bladed beta-propeller.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=87.49  E-value=6.6  Score=32.41  Aligned_cols=63  Identities=14%  Similarity=0.110  Sum_probs=35.3

Q ss_pred             EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee--eeecccCcCcEEEEEEcCC---CCCEEEEEc
Q psy6415          31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY--LSEKAHKATTVWAAKHLPQ---NRDLFVTCG   99 (174)
Q Consensus        31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~--~~~~~h~~~~i~~v~fsP~---~~~~las~s   99 (174)
                      -++|+|.|++   . ++.+...|.|++++..... ...+..  ........ .+..++|+|+   ++.++++-+
T Consensus         4 P~~~a~~pdG---~-l~v~e~~G~i~~~~~~g~~-~~~v~~~~~v~~~~~~-gllgia~~p~f~~n~~lYv~~t   71 (331)
T PF07995_consen    4 PRSMAFLPDG---R-LLVAERSGRIWVVDKDGSL-KTPVADLPEVFADGER-GLLGIAFHPDFASNGYLYVYYT   71 (331)
T ss_dssp             EEEEEEETTS---C-EEEEETTTEEEEEETTTEE-CEEEEE-TTTBTSTTB-SEEEEEE-TTCCCC-EEEEEEE
T ss_pred             ceEEEEeCCC---c-EEEEeCCceEEEEeCCCcC-cceecccccccccccC-CcccceeccccCCCCEEEEEEE
Confidence            4789999973   4 5556779999999933321 011110  01112333 6899999993   344555544

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=87.00  E-value=9.6  Score=27.60  Aligned_cols=100  Identities=16%  Similarity=0.153  Sum_probs=60.3

Q ss_pred             CEEEEecCCcEEEEECCCCC--------eEEEeecCCCEEEEEecCCC--CCCCEEEEEeCCCcEEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--------LKWETNLKNGVCGVDFDRRD--IPMNKLVATTLEAKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--------~~~~~~~~~~V~sv~f~~~~--~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~   70 (174)
                      +|+++..-|+|.|.+.....        .+..++....|++|+--|-.  ...+.|+.|+ ..+|-.||+.+....  | 
T Consensus        12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d~--F-   87 (136)
T PF14781_consen   12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSDL--F-   87 (136)
T ss_pred             eEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCchh--h-
Confidence            47888889999999876332        23445667778887543321  1235566665 456889999886532  1 


Q ss_pred             eeeecccCcCcEEEEEEc---CCCCCEEEEEcCCCcEEEEec
Q psy6415          71 YLSEKAHKATTVWAAKHL---PQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        71 ~~~~~~h~~~~i~~v~fs---P~~~~~las~s~Dg~V~lWd~  109 (174)
                      .   +.-++ .|+++.+-   ..... ++-.|.+..|.=+|.
T Consensus        88 y---ke~~D-Gvn~i~~g~~~~~~~~-l~ivGGncsi~Gfd~  124 (136)
T PF14781_consen   88 Y---KEVPD-GVNAIVIGKLGDIPSP-LVIVGGNCSIQGFDY  124 (136)
T ss_pred             h---hhCcc-ceeEEEEEecCCCCCc-EEEECceEEEEEeCC
Confidence            1   11224 67777652   21223 444566777777777

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=86.60  E-value=5.3  Score=37.86  Aligned_cols=74  Identities=9%  Similarity=0.135  Sum_probs=52.3

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc-cCcCcEEEEEEcCCCCCEEEEEcCCCcEEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA-HKATTVWAAKHLPQNRDLFVTCGGSGSLNL  106 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~-h~~~~i~~v~fsP~~~~~las~s~Dg~V~l  106 (174)
                      ...|..++||+++   ..||.--.|. |+||-..+.+-   |+-+.+.- ... .+..+.|+|.++..|.....+|.+..
T Consensus       304 ~~~v~~l~Wn~ds---~iLAv~~~~~-vqLWt~~NYHW---YLKqei~~~~~~-~~~~~~Wdpe~p~~L~v~t~~g~~~~  375 (928)
T PF04762_consen  304 EEKVIELAWNSDS---EILAVWLEDR-VQLWTRSNYHW---YLKQEIRFSSSE-SVNFVKWDPEKPLRLHVLTSNGQYEI  375 (928)
T ss_pred             CceeeEEEECCCC---CEEEEEecCC-ceEEEeeCCEE---EEEEEEEccCCC-CCCceEECCCCCCEEEEEecCCcEEE
Confidence            3568999999974   7888766555 99999887541   11122221 122 45569999998888888888888988


Q ss_pred             Eec
Q psy6415         107 WQL  109 (174)
Q Consensus       107 Wd~  109 (174)
                      +++
T Consensus       376 ~~~  378 (928)
T PF04762_consen  376 YDF  378 (928)
T ss_pred             EEE
Confidence            777

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=86.51  E-value=6.1  Score=33.23  Aligned_cols=67  Identities=16%  Similarity=0.104  Sum_probs=40.1

Q ss_pred             EEEecCCCCCCCEEEEE-eCC----CcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCC------
Q psy6415          33 GVDFDRRDIPMNKLVAT-TLE----AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGS------  101 (174)
Q Consensus        33 sv~f~~~~~~~~~l~s~-s~D----g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~D------  101 (174)
                      ..+++|++   +++|.+ +..    .+|++.|+++++.+.    ..+..  . ....+.|.+++..+|.+.-.+      
T Consensus       128 ~~~~Spdg---~~la~~~s~~G~e~~~l~v~Dl~tg~~l~----d~i~~--~-~~~~~~W~~d~~~~~y~~~~~~~~~~~  197 (414)
T PF02897_consen  128 GFSVSPDG---KRLAYSLSDGGSEWYTLRVFDLETGKFLP----DGIEN--P-KFSSVSWSDDGKGFFYTRFDEDQRTSD  197 (414)
T ss_dssp             EEEETTTS---SEEEEEEEETTSSEEEEEEEETTTTEEEE----EEEEE--E-ESEEEEECTTSSEEEEEECSTTTSS-C
T ss_pred             eeeECCCC---CEEEEEecCCCCceEEEEEEECCCCcCcC----Ccccc--c-ccceEEEeCCCCEEEEEEeCccccccc
Confidence            56788874   777644 333    459999999975331    11111  1 122399999666555655332      


Q ss_pred             ----CcEEEEec
Q psy6415         102 ----GSLNLWQL  109 (174)
Q Consensus       102 ----g~V~lWd~  109 (174)
                          ..|++|++
T Consensus       198 ~~~~~~v~~~~~  209 (414)
T PF02897_consen  198 SGYPRQVYRHKL  209 (414)
T ss_dssp             CGCCEEEEEEET
T ss_pred             CCCCcEEEEEEC
Confidence                23777877

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG1916|consensus

Probab=85.36  E-value=1.2  Score=41.60  Aligned_cols=57  Identities=5%  Similarity=0.158  Sum_probs=35.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEE-----------ecCCCCCCCEEEEEeCCCcEEEEECC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVD-----------FDRRDIPMNKLVATTLEAKLFVFDLK   61 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~-----------f~~~~~~~~~l~s~s~Dg~I~iWD~~   61 (174)
                      +..+-++++|++-.+.+........|...+..++           .+|+   |..+|++..||.++.|.+.
T Consensus       198 ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpD---Gtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  198 ICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPD---GTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             eeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCC---CcEEEEeecCCccceeeee
Confidence            4456678888887765433211112333333222           5776   4899999999999999875

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=84.64  E-value=17  Score=28.46  Aligned_cols=59  Identities=22%  Similarity=0.366  Sum_probs=39.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR   65 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~   65 (174)
                      |+.|.++| |.+++++.............|..+..-|.-   +.|++-+ |+.+.++|+.....
T Consensus        10 L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~---~~llvLs-d~~l~~~~L~~l~~   68 (275)
T PF00780_consen   10 LLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPEL---NLLLVLS-DGQLYVYDLDSLEP   68 (275)
T ss_pred             EEEEECCC-EEEEEecCCccceeEeecceEEEEEEeccc---CEEEEEc-CCccEEEEchhhcc
Confidence            67888888 899998332222222223348888888753   6665554 49999999987543

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2377|consensus

Probab=84.63  E-value=8.8  Score=33.59  Aligned_cols=71  Identities=14%  Similarity=0.109  Sum_probs=46.6

Q ss_pred             EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -+.|-|+.    .|+++.+...|.+.=|-+......  ..+.-.....+ +|.+++|||+ ..++|.--.|.+|.+++.
T Consensus        25 sngvFfDD----aNkqlfavrSggatgvvvkgpndD--VpiSfdm~d~G-~I~SIkFSlD-nkilAVQR~~~~v~f~nf   95 (657)
T KOG2377|consen   25 SNGVFFDD----ANKQLFAVRSGGATGVVVKGPNDD--VPISFDMDDKG-EIKSIKFSLD-NKILAVQRTSKTVDFCNF   95 (657)
T ss_pred             ccceeecc----CcceEEEEecCCeeEEEEeCCCCC--CCceeeecCCC-ceeEEEeccC-cceEEEEecCceEEEEec
Confidence            34555653    256665666666667766654321  11111123456 9999999995 568999999999999998

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=84.62  E-value=4.7  Score=21.86  Aligned_cols=27  Identities=15%  Similarity=0.381  Sum_probs=19.8

Q ss_pred             cEEEEEEcCCCCCEEEEEcCC--CcEEEE
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGS--GSLNLW  107 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~D--g~V~lW  107 (174)
                      .-...+|||++..++.++..+  |.-.||
T Consensus        10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen   10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             cccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            567889999877777777777  777776

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=84.10  E-value=22  Score=29.28  Aligned_cols=92  Identities=12%  Similarity=0.073  Sum_probs=53.5

Q ss_pred             cCCcEEEEECCCCCeEEE--e---ecCCCEEEEEecCCCCCCCEEEEE----------------eCCCcEEEEECCCccc
Q psy6415           7 DNGDLKMFDLKTMSLKWE--T---NLKNGVCGVDFDRRDIPMNKLVAT----------------TLEAKLFVFDLKTLHR   65 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~--~---~~~~~V~sv~f~~~~~~~~~l~s~----------------s~Dg~I~iWD~~~~~~   65 (174)
                      .+-.+-+-|.++|+++..  +   .++..|.-+++++++   ..++..                ..++.++..+..... 
T Consensus       136 M~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G---~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~-  211 (305)
T PF07433_consen  136 MQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDG---TVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQ-  211 (305)
T ss_pred             cCCceEEEecCCCceeeeeecCccccccceeeEEecCCC---cEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHH-
Confidence            345566667778876544  2   145678888888763   222222                222222222222110 


Q ss_pred             ccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          66 EKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        66 ~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                              ...-.+ -|-+|++++++..+.+|+=.-|.+.+||.++
T Consensus       212 --------~~~l~~-Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~t  248 (305)
T PF07433_consen  212 --------WRRLNG-YIGSIAADRDGRLIAVTSPRGGRVAVWDAAT  248 (305)
T ss_pred             --------HHhhCC-ceEEEEEeCCCCEEEEECCCCCEEEEEECCC
Confidence                    012224 6889999996666778888889999999933

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=83.87  E-value=5.3  Score=34.62  Aligned_cols=51  Identities=12%  Similarity=0.186  Sum_probs=31.9

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      .++.|.+||+.+++.+...... +|..|.|++++   +.+|..+.+ ++.|++...
T Consensus       124 ~~~~i~~yDw~~~~~i~~i~v~-~vk~V~Ws~~g---~~val~t~~-~i~il~~~~  174 (443)
T PF04053_consen  124 SSDFICFYDWETGKLIRRIDVS-AVKYVIWSDDG---ELVALVTKD-SIYILKYNL  174 (443)
T ss_dssp             ETTEEEEE-TTT--EEEEESS--E-EEEEE-TTS---SEEEEE-S--SEEEEEE-H
T ss_pred             CCCCEEEEEhhHcceeeEEecC-CCcEEEEECCC---CEEEEEeCC-eEEEEEecc
Confidence            3458999999999988776544 38999999864   777777755 677877554

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=82.82  E-value=3.6  Score=34.13  Aligned_cols=94  Identities=14%  Similarity=0.137  Sum_probs=53.4

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc-------cC--
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA-------HK--   78 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~-------h~--   78 (174)
                      .+.+.|+|+++++..........+....|+|++   +.+|... ++.|.++++.+....+   + +..+       -.  
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g---~~~~~v~-~~nly~~~~~~~~~~~---l-T~dg~~~i~nG~~dw   93 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPPPPKLQDAKWSPDG---KYIAFVR-DNNLYLRDLATGQETQ---L-TTDGEPGIYNGVPDW   93 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-EETTBSEEEE-SSS---TEEEEEE-TTEEEEESSTTSEEEE---S-ES--TTTEEESB--H
T ss_pred             ceeEEEEecCCCceEECcCCccccccceeecCC---CeeEEEe-cCceEEEECCCCCeEE---e-ccccceeEEcCccce
Confidence            367889999998765443334567788999974   7777764 5789999987653211   0 1111       00  


Q ss_pred             ---c---CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ---A---TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ---~---~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                         .   ..-..+-|||++..+....-.+..|+.+.+
T Consensus        94 vyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~  130 (353)
T PF00930_consen   94 VYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPL  130 (353)
T ss_dssp             HHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEE
T ss_pred             eccccccccccceEECCCCCEEEEEEECCcCCceEEe
Confidence               0   011356799966544444445666777666

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG4649|consensus

Probab=82.59  E-value=23  Score=28.88  Aligned_cols=62  Identities=23%  Similarity=0.230  Sum_probs=45.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEE-EEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCG-VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~s-v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      ++.|...|.+.+-+.++|...+.+...+.|-+ -..+++   +..|-.|+.|++...-|.++..++
T Consensus        66 VV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~---~glIycgshd~~~yalD~~~~~cV  128 (354)
T KOG4649|consen   66 VVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFD---GGLIYCGSHDGNFYALDPKTYGCV  128 (354)
T ss_pred             EEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCC---CceEEEecCCCcEEEecccccceE
Confidence            57788899999999999977766554443321 122333   377889999999999999987654

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=82.49  E-value=41  Score=31.12  Aligned_cols=76  Identities=11%  Similarity=0.125  Sum_probs=47.4

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCc----------c---cccceeee--ee-cccCcCcEEEEEEcCCC--
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTL----------H---REKGFAYL--SE-KAHKATTVWAAKHLPQN--   91 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~----------~---~~~~~~~~--~~-~~h~~~~i~~v~fsP~~--   91 (174)
                      .|..|.+||.+   ..||..|..+ |-|-.+...          .   .++.+.+.  .+ ..+.. .|..++|||..  
T Consensus        86 ~v~~i~~n~~g---~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~-~i~qv~WhP~s~~  160 (717)
T PF10168_consen   86 EVHQISLNPTG---SLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSL-EIKQVRWHPWSES  160 (717)
T ss_pred             eEEEEEECCCC---CEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCc-eEEEEEEcCCCCC
Confidence            47888999974   7777776644 445555321          0   00111110  01 13344 79999999973  


Q ss_pred             CCEEEEEcCCCcEEEEecc
Q psy6415          92 RDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        92 ~~~las~s~Dg~V~lWd~~  110 (174)
                      +..|+.=..|+++++||+.
T Consensus       161 ~~~l~vLtsdn~lR~y~~~  179 (717)
T PF10168_consen  161 DSHLVVLTSDNTLRLYDIS  179 (717)
T ss_pred             CCeEEEEecCCEEEEEecC
Confidence            4577777889999999993

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=81.33  E-value=2  Score=37.87  Aligned_cols=24  Identities=13%  Similarity=0.123  Sum_probs=20.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE   24 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~   24 (174)
                      +|++-+.|+++|+||+++++++..
T Consensus       232 ~l~tl~~D~~LRiW~l~t~~~~~~  255 (547)
T PF11715_consen  232 FLFTLSRDHTLRIWSLETGQCLAT  255 (547)
T ss_dssp             EEEEEETTSEEEEEETTTTCEEEE
T ss_pred             EEEEEeCCCeEEEEECCCCeEEEE
Confidence            367899999999999999998543

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=80.30  E-value=21  Score=31.84  Aligned_cols=58  Identities=12%  Similarity=0.162  Sum_probs=40.4

Q ss_pred             CEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          44 NKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        44 ~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .++|.||..|-|||||.-... .++    -+.+-.. +|-.|..+.++..+||||-.  ++-|-|+
T Consensus       574 GyIa~as~kGDirLyDRig~r-AKt----alP~lG~-aIk~idvta~Gk~ilaTCk~--yllL~d~  631 (776)
T COG5167         574 GYIAAASRKGDIRLYDRIGKR-AKT----ALPGLGD-AIKHIDVTANGKHILATCKN--YLLLTDV  631 (776)
T ss_pred             ceEEEecCCCceeeehhhcch-hhh----cCccccc-ceeeeEeecCCcEEEEeecc--eEEEEec
Confidence            489999999999999954321 111    1224445 78888888877767777654  7888888

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	174
3i2n_A	357	Crystal Structure Of Wd40 Repeats Protein Wdr92 Len		2e-55

>pdb|3I2N|A Chain A, Crystal Structure Of Wd40 Repeats Protein Wdr92 Length = 357

Iteration: 1
 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/174 (58%), Positives = 128/174 (73%), Gaps = 19/174 (10%)
Query: 1   MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL 60
           +V AGYDNGD+K+FDL+ M+L+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD+
Sbjct: 182 VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241
Query: 61  KTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLC 120
           +T H  KGFA +SEKAHK +TVW  +HLPQNR+LF+T GG+G L+LW+            
Sbjct: 242 RTQHPTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAGGLHLWKY----------- 289
Query: 121 SIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                   YP QR+K D + I MGV GS++LLQ  TLS+QPI+SLDWS DK GL
Sbjct: 290 -------EYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	174
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	3e-39

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357

 Score =  135 bits (343), Expect = 3e-39
 Identities = 101/173 (58%), Positives = 127/173 (73%), Gaps = 19/173 (10%)

Query: 2   VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK 61
           V AGYDNGD+K+FDL+ M+L+WETN+KNGVC ++FDR+DI MNKLVAT+LE K  VFD++
Sbjct: 183 VCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242

Query: 62  TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCS 121
           T H  KGFA +SEKAHK+ TVW  +HLPQNR+LF+T GG+G L+LW+             
Sbjct: 243 TQHPTKGFASVSEKAHKS-TVWQVRHLPQNRELFLTAGGAGGLHLWKY------------ 289

Query: 122 IFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL 174
                  YP QR+K D + I MGV GS++LLQ  TLS+QPI+SLDWS DK GL
Sbjct: 290 ------EYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	174
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.94
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.93
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.93
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.93
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.92
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.92
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.92
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.91
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.91
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.91
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.91
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.91
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.91
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.91
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.9
2pm7_B	297	Protein transport protein SEC13, protein transport	99.9
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.9
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.9
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.9
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.9
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.9
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.9
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.9
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.89
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.89
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.89
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.89
2pm7_B	297	Protein transport protein SEC13, protein transport	99.89
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.89
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.89
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.89
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.89
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.88
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.88
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.88
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.88
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.88
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.87
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.87
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.87
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.87
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.87
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.87
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.87
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.87
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.87
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.87
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.87
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.87
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.86
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.86
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.86
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.86
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.86
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.85
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.85
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.85
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.85
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.85
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.85
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.85
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.85
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.85
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.84
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.84
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.84
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.84
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.84
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.84
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.84
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.84
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.84
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.84
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.84
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.83
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.83
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.83
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.83
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.83
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.83
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.83
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.82
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.82
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.82
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.82
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.82
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.82
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.82
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.82
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.82
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.82
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.81
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.81
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.81
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.81
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.8
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.8
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.8
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.8
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.8
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.8
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.8
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.8
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.79
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.79
3jro_A	753	Fusion protein of protein transport protein SEC13	99.79
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.79
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.79
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.78
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.78
3jro_A	753	Fusion protein of protein transport protein SEC13	99.78
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.77
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.77
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.77
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.77
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.76
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.76
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.76
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.76
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.75
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.75
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.75
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.74
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.74
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.74
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.69
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.65
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.65
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.65
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.58
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.52
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.48
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.47
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.47
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.45
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.44
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.44
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.44
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.42
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.41
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.41
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.4
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.4
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.4
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.39
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.38
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.34
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.33
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.31
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.31
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.31
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.3
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.29
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.29
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.28
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.24
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.24
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.23
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.19
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.16
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.14
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.12
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.07
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.04
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.01
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	98.99
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.96
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.92
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	98.91
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	98.89
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	98.84
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.79
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.79
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.78
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	98.78
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.76
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.76
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.75
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	98.73
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.7
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.7
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.68
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.62
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.6
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	98.52
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	98.51
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.5
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.49
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	98.49
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.47
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.41
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.35
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.32
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.31
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.27
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.26
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.19
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.19
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.19
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	98.17
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.17
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.16
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.13
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.07
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.04
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.03
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.02
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.0
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.99
2qe8_A	343	Uncharacterized protein; structural genomics, join	97.99
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	97.99
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	97.93
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.93
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	97.85
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.85
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	97.82
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.81
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	97.78
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	97.75
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.71
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	97.71
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.61
2qe8_A	343	Uncharacterized protein; structural genomics, join	97.46
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	97.44
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	97.37
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.29
2ece_A	462	462AA long hypothetical selenium-binding protein;	97.27
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.2
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.19
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.16
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.14
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	97.14
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	97.13
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	96.99
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	96.97
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	96.96
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	96.92
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	96.91
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	96.91
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	96.74
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	96.68
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.67
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	96.64
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	96.55
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	96.51
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	96.37
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	96.3
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	96.28
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	96.12
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	96.09
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	95.89
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.8
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	95.79
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	95.64
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	95.54
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.49
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	95.48
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.43
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.34
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	95.33
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	95.25
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	94.82
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	94.81
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	94.66
3kya_A	496	Putative phosphatase; structural genomics, joint c	94.34
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	94.13
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	94.04
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.92
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	93.36
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	93.29
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	93.18
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	93.17
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	93.14
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	92.88
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	92.77
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	92.6
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	92.52
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	92.46
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	92.26
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	92.13
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	92.1
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	92.1
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	92.09
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	90.7
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	90.4
2p4o_A	306	Hypothetical protein; putative lactonase, structur	90.04
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	90.02
4a2l_A	795	BT_4663, two-component system sensor histidine kin	89.97
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	89.79
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	89.49
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	89.23
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	89.11
2p4o_A	306	Hypothetical protein; putative lactonase, structur	88.94
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	87.97
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	87.88
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	86.89
2zux_A	591	YESW protein; beta-propeller, lyase, rhamnose comp	86.63
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	85.0
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	84.99
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	84.72
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	83.79
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	83.21
4a2l_A	795	BT_4663, two-component system sensor histidine kin	82.77
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	81.91
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	81.42
3v9f_A	781	Two-component system sensor histidine kinase/RESP	80.34

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.94  E-value=8.9e-26  Score=184.44  Aligned_cols=162  Identities=18%  Similarity=0.246  Sum_probs=117.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-----eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-----TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-----~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      |++|+.||+|+|||+++++....     ..|...|++|+|+|++   ++|++|+.|++|+|||++++++     +.++.+
T Consensus        96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg---~~l~sgs~d~~i~iwd~~~~~~-----~~~~~~  167 (344)
T 4gqb_B           96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG---TQAVSGSKDICIKVWDLAQQVV-----LSSYRA  167 (344)
T ss_dssp             EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECC
T ss_pred             EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC---CEEEEEeCCCeEEEEECCCCcE-----EEEEcC
Confidence            78999999999999998875432     2477889999999974   8999999999999999998654     345679


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc---cccceeeeecCC-CCCC-cc--cCCCCCcccc--cc
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT---NLCSIFRYSSNY-PTQR-TK--PDIDDIPMGV--PG  147 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~---~~~~~~~~~~~~-~~~~-~~--~~~dg~~~~~--~~  147 (174)
                      |.. .|++++|+|++..+||||+.||+|+|||+++.....+   ...........+ |... .+  ...||. +.+  ..
T Consensus       168 h~~-~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~  245 (344)
T 4gqb_B          168 HAA-QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTK  245 (344)
T ss_dssp             CSS-CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESC
T ss_pred             cCC-ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECC
Confidence            999 9999999998778999999999999999944111000   011111112222 3222 11  124442 111  34


Q ss_pred             ccceeeeeeccccceeeeeeCCCCCC
Q psy6415         148 SLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       148 ~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      +++++.++.+|..+|++++||||+..
T Consensus       246 ~~~~~~~~~~h~~~v~~v~fsp~g~~  271 (344)
T 4gqb_B          246 STSCVLSSAVHSQCVTGLVFSPHSVP  271 (344)
T ss_dssp             C--CCEEEECCSSCEEEEEECSSSSC
T ss_pred             CCcEEEEEcCCCCCEEEEEEccCCCe
Confidence            56789999999999999999999853

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.93  E-value=2.2e-25  Score=182.07  Aligned_cols=127  Identities=11%  Similarity=0.100  Sum_probs=104.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|+||+.||+|+|||+++++......   +...+++++|+|++  +++|++|+.|++|+|||+++.+++     .++.+|
T Consensus       184 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~l~sg~~dg~v~~wd~~~~~~~-----~~~~~h  256 (344)
T 4gqb_B          184 VFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ--SEVFVFGDENGTVSLVDTKSTSCV-----LSSAVH  256 (344)
T ss_dssp             EEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSC--TTEEEEEETTSEEEEEESCC--CC-----EEEECC
T ss_pred             ceeeeccccccccccccccceeeeeecceeeccceeeeecCCC--CcceEEeccCCcEEEEECCCCcEE-----EEEcCC
Confidence            37899999999999999998766542   34569999999964  478999999999999999987654     355689


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|++|+|+|++..+||||+.||+|+|||++                            .         ++ +..+.+
T Consensus       257 ~~-~v~~v~fsp~g~~~lasgs~D~~i~vwd~~----------------------------~---------~~-~~~~~~  297 (344)
T 4gqb_B          257 SQ-CVTGLVFSPHSVPFLASLSEDCSLAVLDSS----------------------------L---------SE-LFRSQA  297 (344)
T ss_dssp             SS-CEEEEEECSSSSCCEEEEETTSCEEEECTT----------------------------C---------CE-EEEECC
T ss_pred             CC-CEEEEEEccCCCeEEEEEeCCCeEEEEECC----------------------------C---------Cc-EEEEcC
Confidence            99 999999999766789999999999999991                            1         12 345789


Q ss_pred             cccceeeeeeCCCCCC
Q psy6415         158 SSQPINSLDWSADKLG  173 (174)
Q Consensus       158 h~~~V~~l~~spd~~~  173 (174)
                      |+.+|++|+||||++.
T Consensus       298 H~~~V~~v~~sp~~~~  313 (344)
T 4gqb_B          298 HRDFVRDATWSPLNHS  313 (344)
T ss_dssp             CSSCEEEEEECSSSTT
T ss_pred             CCCCEEEEEEeCCCCe
Confidence            9999999999999875

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.93  E-value=1.6e-24  Score=172.79  Aligned_cols=164  Identities=8%  Similarity=0.058  Sum_probs=117.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.|++|++||++++++...+ .|...|++|+|+|++   +.|++|+.|++|+|||+++...    ....+.+|..
T Consensus        69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~sgs~D~~v~lWd~~~~~~----~~~~~~~h~~  141 (304)
T 2ynn_A           69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWA----LEQTFEGHEH  141 (304)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS---SEEEEEETTSCEEEEEGGGTTE----EEEEECCCCS
T ss_pred             EEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC---CEEEEECCCCeEEEEECCCCcc----hhhhhcccCC
Confidence            3899999999999999999887654 477889999999974   8999999999999999987532    2235578999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc---cc-cccceeeeecCC-CCCCcc--cCCCCCcccc--ccccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA---DT-NLCSIFRYSSNY-PTQRTK--PDIDDIPMGV--PGSLT  150 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~---~~-~~~~~~~~~~~~-~~~~~~--~~~dg~~~~~--~~~~~  150 (174)
                       .|++++|+|.++.+||||+.||+|++||+.+....   .. ....+..+.... |+...+  ...||. +.+  ..+++
T Consensus       142 -~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~  219 (304)
T 2ynn_A          142 -FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKS  219 (304)
T ss_dssp             -CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTE
T ss_pred             -cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCc
Confidence             99999999977889999999999999999331110   00 000010010000 122222  113431 111  24557


Q ss_pred             eeeeeeccccceeeeeeCCCCCC
Q psy6415         151 LLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       151 ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      ++.++.+|..+|.+++|+|+++-
T Consensus       220 ~~~~~~~h~~~v~~~~~~p~~~~  242 (304)
T 2ynn_A          220 CVATLEGHMSNVSFAVFHPTLPI  242 (304)
T ss_dssp             EEEEEECCSSCEEEEEECSSSSE
T ss_pred             cceeeCCCCCCEEEEEECCCCCE
Confidence            89999999999999999999863

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.93  E-value=1.4e-24  Score=175.07  Aligned_cols=126  Identities=14%  Similarity=0.245  Sum_probs=109.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|++||++++++..... |...|++++|+|++   +.|++|+.|++|+|||+++.+.     ..++.+|..
T Consensus       178 ~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~---~~l~s~s~dg~i~iwd~~~~~~-----~~~~~~h~~  249 (321)
T 3ow8_A          178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS---QLLVTASDDGYIKIYDVQHANL-----AGTLSGHAS  249 (321)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS---CEEEEECTTSCEEEEETTTCCE-----EEEECCCSS
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC---CEEEEEcCCCeEEEEECCCcce-----eEEEcCCCC
Confidence            48999999999999999998876654 67789999999974   8999999999999999998653     345678999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++|+| ++.+||||+.||+|++||+                             .        +++++.++.+|.
T Consensus       250 -~v~~~~~sp-~~~~l~s~s~D~~v~iwd~-----------------------------~--------~~~~~~~~~~h~  290 (321)
T 3ow8_A          250 -WVLNVAFCP-DDTHFVSSSSDKSVKVWDV-----------------------------G--------TRTCVHTFFDHQ  290 (321)
T ss_dssp             -CEEEEEECT-TSSEEEEEETTSCEEEEET-----------------------------T--------TTEEEEEECCCS
T ss_pred             -ceEEEEECC-CCCEEEEEeCCCcEEEEeC-----------------------------C--------CCEEEEEEcCCC
Confidence             999999999 5678999999999999999                             1        135788999999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|++++|+||++-
T Consensus       291 ~~v~~v~~s~~g~~  304 (321)
T 3ow8_A          291 DQVWGVKYNGNGSK  304 (321)
T ss_dssp             SCEEEEEECTTSSE
T ss_pred             CcEEEEEECCCCCE
Confidence            99999999999863

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.92  E-value=4.8e-24  Score=172.48  Aligned_cols=162  Identities=14%  Similarity=0.102  Sum_probs=117.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |++|+.|++|++||++++++...+ .|...|++++|+|++   +.|++|+.|++|+|||+++..+.     .++.+|.. 
T Consensus       157 l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~sg~~d~~v~~wd~~~~~~~-----~~~~~h~~-  227 (340)
T 1got_B          157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT---RLFVSGACDASAKLWDVREGMCR-----QTFTGHES-  227 (340)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCSEE-----EEECCCSS-
T ss_pred             EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCC---CEEEEEeCCCcEEEEECCCCeeE-----EEEcCCcC-
Confidence            789999999999999999877665 467889999999974   89999999999999999986543     35568999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc---cccceeeeecCC-CCCCcccC--CCCCcccc--cccccee
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT---NLCSIFRYSSNY-PTQRTKPD--IDDIPMGV--PGSLTLL  152 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~--~dg~~~~~--~~~~~ll  152 (174)
                      .|++++|+| ++.+||+|+.||+|++||+.+......   +..........| |++..++.  .||. +.+  ..+.+.+
T Consensus       228 ~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~  305 (340)
T 1got_B          228 DINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRA  305 (340)
T ss_dssp             CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEE
T ss_pred             CEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEe
Confidence            999999999 567999999999999999943111000   000000111222 33332221  3331 111  2345678


Q ss_pred             eeeeccccceeeeeeCCCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      .++.+|..+|.+++||||++.|
T Consensus       306 ~~~~~h~~~v~~~~~s~dg~~l  327 (340)
T 1got_B          306 GVLAGHDNRVSCLGVTDDGMAV  327 (340)
T ss_dssp             EEEECCSSCEEEEEECTTSSCE
T ss_pred             eEeecCCCcEEEEEEcCCCCEE
Confidence            8999999999999999998743

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.92  E-value=3.7e-24  Score=170.89  Aligned_cols=155  Identities=65%  Similarity=1.124  Sum_probs=122.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|++|+.||.|++||++++++.....+...|.+++|+|.+.+++.|++++.|+.|++||+++.++...+....+.+|.. 
T Consensus       182 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-  260 (357)
T 3i2n_A          182 VVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS-  260 (357)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS-
T ss_pred             EEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC-
Confidence            3789999999999999999887777788999999999921114899999999999999999876655444444558988 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|++++|+|++..+|++|+.||.|++||++.                  +........+|.+.+..++.+++.++.+|..
T Consensus       261 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  322 (357)
T 3i2n_A          261 TVWQVRHLPQNRELFLTAGGAGGLHLWKYEY------------------PIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ  322 (357)
T ss_dssp             CEEEEEEETTEEEEEEEEETTSEEEEEEEEC------------------CSCC--CCTTSCCCCCCCEEEEEEEEECCSS
T ss_pred             CEEEEEECCCCCcEEEEEeCCCcEEEeecCC------------------CcccccccCCCCccccccccceeeccccCCC
Confidence            9999999996544899999999999999921                  1111112234555555566788999999999


Q ss_pred             ceeeeeeCCCCCCC
Q psy6415         161 PINSLDWSADKLGL  174 (174)
Q Consensus       161 ~V~~l~~spd~~~~  174 (174)
                      +|++++|||+++.|
T Consensus       323 ~v~~~~~s~~~~~l  336 (357)
T 3i2n_A          323 PISSLDWSPDKRGL  336 (357)
T ss_dssp             CEEEEEECSSSTTE
T ss_pred             CeeEEEEcCCCCeE
Confidence            99999999999754

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.92  E-value=1e-23  Score=171.91  Aligned_cols=164  Identities=16%  Similarity=0.192  Sum_probs=117.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |++|+.||+|++||++++++...+ .|...|.+++|+|.. +++.|++|+.|++|++||+++.++.     ..+.+|.. 
T Consensus       169 l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~g~~l~sgs~Dg~v~~wd~~~~~~~-----~~~~~h~~-  241 (354)
T 2pbi_B          169 ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSE-TGNTFVSGGCDKKAMVWDMRSGQCV-----QAFETHES-  241 (354)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCS-SCCEEEEEETTSCEEEEETTTCCEE-----EEECCCSS-
T ss_pred             EEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCC-CCCEEEEEeCCCeEEEEECCCCcEE-----EEecCCCC-
Confidence            789999999999999999887665 467889999998852 2579999999999999999987643     34568999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc--cccccee-eeecCC-CCCCcccC--CCCCcccc--cccccee
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD--TNLCSIF-RYSSNY-PTQRTKPD--IDDIPMGV--PGSLTLL  152 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~--~~~~~~~-~~~~~~-~~~~~~~~--~dg~~~~~--~~~~~ll  152 (174)
                      .|++++|+| ++..||||+.||+|++||+.+.....  ......+ .....+ |++..++.  .||. +.+  ..+++.+
T Consensus       242 ~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~  319 (354)
T 2pbi_B          242 DVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRV  319 (354)
T ss_dssp             CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEE
T ss_pred             CeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceE
Confidence            999999999 56799999999999999993311100  0000000 011222 33332221  3331 111  2345678


Q ss_pred             eeeeccccceeeeeeCCCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      ..+.+|..+|.+++||||++.|
T Consensus       320 ~~l~~h~~~v~~l~~spdg~~l  341 (354)
T 2pbi_B          320 SILFGHENRVSTLRVSPDGTAF  341 (354)
T ss_dssp             EEECCCSSCEEEEEECTTSSCE
T ss_pred             EEEECCCCcEEEEEECCCCCEE
Confidence            8899999999999999999753

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.91  E-value=1e-23  Score=168.07  Aligned_cols=125  Identities=14%  Similarity=0.210  Sum_probs=106.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|+|||++++....... +...|.+++|+|++   +.|++|+.|++|+|||+++.++     +..+.+|..
T Consensus        27 ~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~s~d~~i~vwd~~~~~~-----~~~~~~h~~   98 (304)
T 2ynn_A           27 WVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK---NWIIVGSDDFRIRVFNYNTGEK-----VVDFEAHPD   98 (304)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG---TEEEEEETTSEEEEEETTTCCE-----EEEEECCSS
T ss_pred             EEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC---CEEEEECCCCEEEEEECCCCcE-----EEEEeCCCC
Confidence            48999999999999999988776554 66789999999974   8999999999999999998764     345568999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++|+| ++.+||||+.||+|++||++                            .+        ..+...+.+|.
T Consensus        99 -~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~----------------------------~~--------~~~~~~~~~h~  140 (304)
T 2ynn_A           99 -YIRSIAVHP-TKPYVLSGSDDLTVKLWNWE----------------------------NN--------WALEQTFEGHE  140 (304)
T ss_dssp             -CEEEEEECS-SSSEEEEEETTSCEEEEEGG----------------------------GT--------TEEEEEECCCC
T ss_pred             -cEEEEEEcC-CCCEEEEECCCCeEEEEECC----------------------------CC--------cchhhhhcccC
Confidence             999999999 46789999999999999991                            11        13567889999


Q ss_pred             cceeeeeeCCCC
Q psy6415         160 QPINSLDWSADK  171 (174)
Q Consensus       160 ~~V~~l~~spd~  171 (174)
                      .+|++++|+|++
T Consensus       141 ~~v~~v~~~p~~  152 (304)
T 2ynn_A          141 HFVMCVAFNPKD  152 (304)
T ss_dssp             SCEEEEEECTTC
T ss_pred             CcEEEEEECCCC
Confidence            999999999953

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.91  E-value=1.7e-23  Score=169.26  Aligned_cols=162  Identities=14%  Similarity=0.238  Sum_probs=111.4

Q ss_pred             CEEEEecCCcEEEEECCCCC-------eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-------LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-------~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      +||||+.|++|+|||+.++.       .... ..|...|.+++|+|++   ..|++|+.|++|+|||+++.++     ..
T Consensus        41 ~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~---~~l~s~s~D~~v~lwd~~~~~~-----~~  112 (343)
T 2xzm_R           41 VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN---CFAISSSWDKTLRLWDLRTGTT-----YK  112 (343)
T ss_dssp             EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST---TEEEEEETTSEEEEEETTSSCE-----EE
T ss_pred             EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC---CEEEEEcCCCcEEEEECCCCcE-----EE
Confidence            48999999999999997543       2222 3477889999999974   8999999999999999998654     33


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc--c-ccccceeeeecCC-CCCC----------cc--c
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA--D-TNLCSIFRYSSNY-PTQR----------TK--P  136 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~--~-~~~~~~~~~~~~~-~~~~----------~~--~  136 (174)
                      .+.+|.. .|++++|+| ++..||+|+.||+|++||+......  . ...+........| |...          .+  .
T Consensus       113 ~~~~h~~-~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~  190 (343)
T 2xzm_R          113 RFVGHQS-EVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASV  190 (343)
T ss_dssp             EEECCCS-CEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEE
T ss_pred             EEcCCCC-cEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEE
Confidence            5568999 999999999 5678999999999999999321110  0 0011111111222 2211          11  1


Q ss_pred             CCCCCcccc-ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         137 DIDDIPMGV-PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       137 ~~dg~~~~~-~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      ..||. +.+ ....+++.++.+|..+|++++|||||+-
T Consensus       191 ~~d~~-i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~  227 (343)
T 2xzm_R          191 GWDGR-LKVWNTNFQIRYTFKAHESNVNHLSISPNGKY  227 (343)
T ss_dssp             ETTSE-EEEEETTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred             cCCCE-EEEEcCCCceeEEEcCccccceEEEECCCCCE
Confidence            12331 111 1223467788999999999999999864

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.91  E-value=2.7e-23  Score=170.58  Aligned_cols=164  Identities=14%  Similarity=0.151  Sum_probs=112.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      .|+||+.|++|++||+++++.....      .|...|.+++|+|.+  ++.|++|+.|++|+|||++....    ....+
T Consensus       172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~sgs~D~~v~~wd~~~~~~----~~~~~  245 (380)
T 3iz6_a          172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN--ANMFISGSCDTTVRLWDLRITSR----AVRTY  245 (380)
T ss_dssp             CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS--CCEEEEEETTSCEEEEETTTTCC----CCEEE
T ss_pred             EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC--CCEEEEEECCCeEEEEECCCCCc----ceEEE
Confidence            3899999999999999999876543      356789999998743  48999999999999999985321    23455


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc-----cc---ccceeeeecCC-CCCCcccC--CCCCcc
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD-----TN---LCSIFRYSSNY-PTQRTKPD--IDDIPM  143 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~-----~~---~~~~~~~~~~~-~~~~~~~~--~dg~~~  143 (174)
                      .+|.. .|++|+|+| ++..||||+.||+|+|||+.+.....     ..   ....+.....| |++..++.  .||. +
T Consensus       246 ~~h~~-~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i  322 (380)
T 3iz6_a          246 HGHEG-DINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-C  322 (380)
T ss_dssp             CCCSS-CCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-E
T ss_pred             CCcCC-CeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-E
Confidence            68999 999999999 56799999999999999994411100     00   00000111222 33332211  2331 1


Q ss_pred             cc--ccccceeeee----eccccceeeeeeCCCCCC
Q psy6415         144 GV--PGSLTLLQEA----TLSSQPINSLDWSADKLG  173 (174)
Q Consensus       144 ~~--~~~~~ll~~~----~~h~~~V~~l~~spd~~~  173 (174)
                      .+  ...++.+..+    .+|..+|++|+|||||+.
T Consensus       323 ~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~  358 (380)
T 3iz6_a          323 YVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA  358 (380)
T ss_dssp             EEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred             EEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence            11  1233444454    789999999999999864

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.91  E-value=1.1e-23  Score=172.16  Aligned_cols=126  Identities=6%  Similarity=0.118  Sum_probs=103.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      ++++++.||+|+|||+++++.....   .+...|.+|+|+|++  ++.|++|+.|+.|+|||+++.++.     .++.+|
T Consensus       196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~--~~~la~g~~d~~i~~wd~~~~~~~-----~~~~~~  268 (357)
T 4g56_B          196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK--DDTFACGDETGNVSLVNIKNPDSA-----QTSAVH  268 (357)
T ss_dssp             CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS--TTEEEEEESSSCEEEEESSCGGGC-----EEECCC
T ss_pred             eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc--cceEEEeecccceeEEECCCCcEe-----EEEecc
Confidence            4789999999999999998765433   245679999999974  478999999999999999987643     345689


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|++++|+|+++.+||||+.||+|+|||++                            .         ++++..+ +
T Consensus       269 ~~-~v~~l~~sp~~~~~lasgs~D~~i~iwd~~----------------------------~---------~~~~~~~-~  309 (357)
T 4g56_B          269 SQ-NITGLAYSYHSSPFLASISEDCTVAVLDAD----------------------------F---------SEVFRDL-S  309 (357)
T ss_dssp             SS-CEEEEEECSSSSCCEEEEETTSCEEEECTT----------------------------S---------CEEEEEC-C
T ss_pred             ce-eEEEEEEcCCCCCEEEEEeCCCEEEEEECC----------------------------C---------CcEeEEC-C
Confidence            88 999999999877789999999999999991                            1         2344444 8


Q ss_pred             cccceeeeeeCC-CCC
Q psy6415         158 SSQPINSLDWSA-DKL  172 (174)
Q Consensus       158 h~~~V~~l~~sp-d~~  172 (174)
                      |+.+|++|+||| |+.
T Consensus       310 H~~~V~~vafsP~d~~  325 (357)
T 4g56_B          310 HRDFVTGVAWSPLDHS  325 (357)
T ss_dssp             CSSCEEEEEECSSSTT
T ss_pred             CCCCEEEEEEeCCCCC
Confidence            999999999999 554

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.91  E-value=4.2e-23  Score=166.44  Aligned_cols=135  Identities=13%  Similarity=0.174  Sum_probs=100.4

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEEe--e-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc--cceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWET--N-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE--KGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~~--~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~--~~~~~~~   73 (174)
                      +||+|+.|++|+|||++++.  +....  . |...|++|+|+|++   +.|++|+.|++|+|||++.....  .......
T Consensus        26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~---~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~  102 (330)
T 2hes_X           26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT---SLLAAGSFDSTVSIWAKEESADRTFEMDLLAI  102 (330)
T ss_dssp             EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS---SEEEEEETTSCEEEEEC-------CCCEEEEE
T ss_pred             EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC---CEEEEEeCCCcEEEEEcccCcCccccceeEEE
Confidence            48999999999999998763  33333  2 67889999999974   89999999999999999643210  1112345


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceee
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQ  153 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~  153 (174)
                      +.+|.. .|++++|+| ++.+||||+.|++|++||+..                           .+      ...+++.
T Consensus       103 ~~~h~~-~V~~v~~sp-~g~~las~s~D~~v~iwd~~~---------------------------~~------~~~~~~~  147 (330)
T 2hes_X          103 IEGHEN-EVKGVAWSN-DGYYLATCSRDKSVWIWETDE---------------------------SG------EEYECIS  147 (330)
T ss_dssp             EC-----CEEEEEECT-TSCEEEEEETTSCEEEEECCT---------------------------TC------CCCEEEE
T ss_pred             EcCCCC-cEEEEEECC-CCCEEEEEeCCCEEEEEeccC---------------------------CC------CCeEEEE
Confidence            678999 999999999 567999999999999999910                           01      0124678


Q ss_pred             eeeccccceeeeeeCCCCCC
Q psy6415         154 EATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       154 ~~~~h~~~V~~l~~spd~~~  173 (174)
                      ++.+|..+|++++|+|++.-
T Consensus       148 ~~~~h~~~v~~v~~~p~~~~  167 (330)
T 2hes_X          148 VLQEHSQDVKHVIWHPSEAL  167 (330)
T ss_dssp             EECCCSSCEEEEEECSSSSE
T ss_pred             EeccCCCceEEEEECCCCCE
Confidence            88999999999999999753

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.91  E-value=3.1e-23  Score=168.17  Aligned_cols=131  Identities=12%  Similarity=0.214  Sum_probs=106.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE--E--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW--E--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~--~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +||+|+.|++|+|||+.++....  .  ..|...|.+|+|+|++   ++||+|+.|++|+|||+++...   ....++.+
T Consensus        30 ~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g---~~l~s~s~D~~v~iw~~~~~~~---~~~~~~~~  103 (345)
T 3fm0_A           30 LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG---NYLASASFDATTCIWKKNQDDF---ECVTTLEG  103 (345)
T ss_dssp             CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS---SEEEEEETTSCEEEEEECCC-E---EEEEEECC
T ss_pred             EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC---CEEEEEECCCcEEEEEccCCCe---EEEEEccC
Confidence            58999999999999998876432  1  2467889999999974   8999999999999999987532   12346679


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT  156 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~  156 (174)
                      |.. .|++++|+| ++.+||||+.||+|++||++                            ++      ...+.+..+.
T Consensus       104 h~~-~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~----------------------------~~------~~~~~~~~~~  147 (345)
T 3fm0_A          104 HEN-EVKSVAWAP-SGNLLATCSRDKSVWVWEVD----------------------------EE------DEYECVSVLN  147 (345)
T ss_dssp             CSS-CEEEEEECT-TSSEEEEEETTSCEEEEEEC----------------------------TT------SCEEEEEEEC
T ss_pred             CCC-CceEEEEeC-CCCEEEEEECCCeEEEEECC----------------------------CC------CCeEEEEEec
Confidence            999 999999999 56799999999999999991                            11      0124577889


Q ss_pred             ccccceeeeeeCCCCCC
Q psy6415         157 LSSQPINSLDWSADKLG  173 (174)
Q Consensus       157 ~h~~~V~~l~~spd~~~  173 (174)
                      +|..+|++++|+|+++-
T Consensus       148 ~h~~~v~~~~~~p~~~~  164 (345)
T 3fm0_A          148 SHTQDVKHVVWHPSQEL  164 (345)
T ss_dssp             CCCSCEEEEEECSSSSC
T ss_pred             CcCCCeEEEEECCCCCE
Confidence            99999999999999864

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.91  E-value=2.1e-23  Score=173.09  Aligned_cols=125  Identities=14%  Similarity=0.268  Sum_probs=108.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|+|||+.++++...+ .|...|.+|+|+|++   +.|++|+.|++|+|||+++.++.     .++.+|..
T Consensus       122 ~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~---~~l~sgs~D~~i~iwd~~~~~~~-----~~~~~h~~  193 (410)
T 1vyh_C          122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG---KLLASCSADMTIKLWDFQGFECI-----RTMHGHDH  193 (410)
T ss_dssp             EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS---SEEEEEETTSCCCEEETTSSCEE-----ECCCCCSS
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCcee-----EEEcCCCC
Confidence            4899999999999999999877654 477889999999974   89999999999999999886543     34568999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++|+| ++..|+||+.|++|++||++                            .         ++.+.++.+|.
T Consensus       194 -~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~----------------------------~---------~~~~~~~~~h~  234 (410)
T 1vyh_C          194 -NVSSVSIMP-NGDHIVSASRDKTIKMWEVQ----------------------------T---------GYCVKTFTGHR  234 (410)
T ss_dssp             -CEEEEEECS-SSSEEEEEETTSEEEEEETT----------------------------T---------CCEEEEEECCS
T ss_pred             -CEEEEEEeC-CCCEEEEEeCCCeEEEEECC----------------------------C---------CcEEEEEeCCC
Confidence             999999999 56789999999999999991                            1         24678889999


Q ss_pred             cceeeeeeCCCCC
Q psy6415         160 QPINSLDWSADKL  172 (174)
Q Consensus       160 ~~V~~l~~spd~~  172 (174)
                      ..|+++.|+||+.
T Consensus       235 ~~v~~~~~~~~g~  247 (410)
T 1vyh_C          235 EWVRMVRPNQDGT  247 (410)
T ss_dssp             SCEEEEEECTTSS
T ss_pred             ccEEEEEECCCCC
Confidence            9999999999985

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.90  E-value=6.6e-23  Score=164.57  Aligned_cols=126  Identities=17%  Similarity=0.262  Sum_probs=106.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|+||+.|++|+|||++++++...+ .|...|.+++|+|++   +.|++|+.|++|+|||++..      ...++.+|..
T Consensus        79 ~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~vwd~~~~------~~~~~~~h~~  149 (319)
T 3frx_A           79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA---SMIISGSRDKTIKVWTIKGQ------CLATLLGHND  149 (319)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS---CEEEEEETTSCEEEEETTSC------EEEEECCCSS
T ss_pred             EEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC---CEEEEEeCCCeEEEEECCCC------eEEEEeccCC
Confidence            4799999999999999999877654 577889999999974   89999999999999999753      2345568999


Q ss_pred             CcEEEEEEcCC-----CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          80 TTVWAAKHLPQ-----NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        80 ~~i~~v~fsP~-----~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                       .|.+++|+|.     +..+|++|+.|++|++||+                             .        +.++...
T Consensus       150 -~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~-----------------------------~--------~~~~~~~  191 (319)
T 3frx_A          150 -WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL-----------------------------N--------QFQIEAD  191 (319)
T ss_dssp             -CEEEEEECCC------CCEEEEEETTSCEEEEET-----------------------------T--------TTEEEEE
T ss_pred             -cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEEC-----------------------------C--------cchhhee
Confidence             9999999995     2348999999999999999                             1        1246778


Q ss_pred             eeccccceeeeeeCCCCCC
Q psy6415         155 ATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       155 ~~~h~~~V~~l~~spd~~~  173 (174)
                      +.+|..+|++++||||++-
T Consensus       192 ~~~h~~~v~~~~~sp~g~~  210 (319)
T 3frx_A          192 FIGHNSNINTLTASPDGTL  210 (319)
T ss_dssp             ECCCCSCEEEEEECTTSSE
T ss_pred             ecCCCCcEEEEEEcCCCCE
Confidence            8899999999999999863

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.90  E-value=8.9e-23  Score=162.13  Aligned_cols=133  Identities=17%  Similarity=0.210  Sum_probs=104.6

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||||+.||+|+|||+++++  .... ..|...|++++|+|+. .++.|++++.|++|+|||+++....   ....+.+|
T Consensus        69 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~g~~l~s~s~d~~v~~wd~~~~~~~---~~~~~~~h  144 (297)
T 2pm7_B           69 ILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE-YGPMLLVASSDGKVSVVEFKENGTT---SPIIIDAH  144 (297)
T ss_dssp             EEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEEBCSSSCB---CCEEEECC
T ss_pred             EEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC-CCcEEEEEECCCcEEEEEecCCCce---eeeeeecc
Confidence            48999999999999998874  2222 3467889999999962 1378999999999999999875321   12345689


Q ss_pred             CcCcEEEEEEcCCC------------CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          78 KATTVWAAKHLPQN------------RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        78 ~~~~i~~v~fsP~~------------~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                      .. .|++++|+|..            +.+||+|+.||+|+|||+.                            .+.    
T Consensus       145 ~~-~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~----------------------------~~~----  191 (297)
T 2pm7_B          145 AI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN----------------------------SDA----  191 (297)
T ss_dssp             SS-CEEEEEECCCC------------CCEEEEEETTSCEEEEEEE----------------------------TTT----
T ss_pred             cC-ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc----------------------------CCC----
Confidence            98 99999999952            4689999999999999991                            110    


Q ss_pred             ccccceeeeeeccccceeeeeeCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                       ...+++.++.+|..+|++++|||++
T Consensus       192 -~~~~~~~~l~~H~~~V~~v~~sp~~  216 (297)
T 2pm7_B          192 -QTYVLESTLEGHSDWVRDVAWSPTV  216 (297)
T ss_dssp             -TEEEEEEEECCCSSCEEEEEECCCC
T ss_pred             -ceEEEEEEecCCCCceEEEEECCCC
Confidence             0123677899999999999999985

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.90  E-value=8.3e-23  Score=166.86  Aligned_cols=130  Identities=16%  Similarity=0.175  Sum_probs=108.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||++++++...+. |...|++|+|+|++  ...+++++.|++|+|||+++.++...+   ....|..
T Consensus       153 ~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~--~~~~~s~~~dg~v~~wd~~~~~~~~~~---~~~~~~~  227 (357)
T 4g56_B          153 QAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK--DTIFLSCGEDGRILLWDTRKPKPATRI---DFCASDT  227 (357)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC--SSCEEEEETTSCEEECCTTSSSCBCBC---CCTTCCS
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC--CceeeeeccCCceEEEECCCCceeeee---eeccccc
Confidence            48999999999999999998876654 67889999999974  357899999999999999987654322   2335666


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .+.+++|+|+++.+||+|+.|++|++||+.                                     +.+++.++.+|.
T Consensus       228 -~v~~v~~sp~~~~~la~g~~d~~i~~wd~~-------------------------------------~~~~~~~~~~~~  269 (357)
T 4g56_B          228 -IPTSVTWHPEKDDTFACGDETGNVSLVNIK-------------------------------------NPDSAQTSAVHS  269 (357)
T ss_dssp             -CEEEEEECTTSTTEEEEEESSSCEEEEESS-------------------------------------CGGGCEEECCCS
T ss_pred             -cccchhhhhcccceEEEeecccceeEEECC-------------------------------------CCcEeEEEeccc
Confidence             899999999888899999999999999991                                     134678899999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|++|+||||+..
T Consensus       270 ~~v~~l~~sp~~~~  283 (357)
T 4g56_B          270 QNITGLAYSYHSSP  283 (357)
T ss_dssp             SCEEEEEECSSSSC
T ss_pred             eeEEEEEEcCCCCC
Confidence            99999999999853

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.90  E-value=8e-23  Score=164.73  Aligned_cols=126  Identities=12%  Similarity=0.260  Sum_probs=108.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|++||+++++...... +...|.+++|+|++   +.||+|+.|++|+|||+++.+.     +.++.+|..
T Consensus       136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~lasg~~dg~i~iwd~~~~~~-----~~~~~~h~~  207 (321)
T 3ow8_A          136 YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG---KYLASGAIDGIINIFDIATGKL-----LHTLEGHAM  207 (321)
T ss_dssp             EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECCCSS
T ss_pred             EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC---CEEEEEcCCCeEEEEECCCCcE-----EEEEcccCC
Confidence            37999999999999999998776544 55679999999974   8999999999999999998653     345678998


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       +|++++|+| ++.+||+|+.||+|++||++                            .         .+++.++.+|.
T Consensus       208 -~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~----------------------------~---------~~~~~~~~~h~  248 (321)
T 3ow8_A          208 -PIRSLTFSP-DSQLLVTASDDGYIKIYDVQ----------------------------H---------ANLAGTLSGHA  248 (321)
T ss_dssp             -CCCEEEECT-TSCEEEEECTTSCEEEEETT----------------------------T---------CCEEEEECCCS
T ss_pred             -ceeEEEEcC-CCCEEEEEcCCCeEEEEECC----------------------------C---------cceeEEEcCCC
Confidence             999999999 56799999999999999991                            1         24678889999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|.+++|+||++-
T Consensus       249 ~~v~~~~~sp~~~~  262 (321)
T 3ow8_A          249 SWVLNVAFCPDDTH  262 (321)
T ss_dssp             SCEEEEEECTTSSE
T ss_pred             CceEEEEECCCCCE
Confidence            99999999999863

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.90  E-value=2e-22  Score=162.45  Aligned_cols=131  Identities=14%  Similarity=0.179  Sum_probs=99.5

Q ss_pred             CEEEEecCCcEEEEECCCC-------CeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTM-------SLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~-------~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      +||+|+.|++|+|||++..       ++... ..|...|++|+|+|++   ++||+|+.|++|+|||++..... .....
T Consensus        72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g---~~las~s~D~~v~iwd~~~~~~~-~~~~~  147 (330)
T 2hes_X           72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG---YYLATCSRDKSVWIWETDESGEE-YECIS  147 (330)
T ss_dssp             EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS---CEEEEEETTSCEEEEECCTTCCC-CEEEE
T ss_pred             EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC---CEEEEEeCCCEEEEEeccCCCCC-eEEEE
Confidence            4899999999999999532       22333 3477889999999974   89999999999999999643211 11234


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccccee
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLL  152 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll  152 (174)
                      .+.+|.. .|++++|+| ++.+||||+.||+|+|||+.                            .+       ..+.+
T Consensus       148 ~~~~h~~-~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~----------------------------~~-------~~~~~  190 (330)
T 2hes_X          148 VLQEHSQ-DVKHVIWHP-SEALLASSSYDDTVRIWKDY----------------------------DD-------DWECV  190 (330)
T ss_dssp             EECCCSS-CEEEEEECS-SSSEEEEEETTSCEEEEEEE----------------------------TT-------EEEEE
T ss_pred             EeccCCC-ceEEEEECC-CCCEEEEEcCCCeEEEEECC----------------------------CC-------CeeEE
Confidence            5678999 999999999 56799999999999999991                            11       12467


Q ss_pred             eeeeccccceeeeeeCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~  172 (174)
                      .++.+|..+|++++|+|++.
T Consensus       191 ~~~~~h~~~v~~~~~~~~~~  210 (330)
T 2hes_X          191 AVLNGHEGTVWSSDFDKTEG  210 (330)
T ss_dssp             EEECCCSSCEEEEEECCSSS
T ss_pred             EEccCCCCcEEEEEecCCCC
Confidence            88999999999999999854

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.90  E-value=1.3e-22  Score=168.43  Aligned_cols=129  Identities=12%  Similarity=0.214  Sum_probs=108.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCC-----------------CCCEEEEEeCCCcEEEEECCC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDI-----------------PMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~-----------------~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      +|++|+.||+|++||++++.+.... .|...|.+++|+|+..                 .+..|++|+.|++|+|||+++
T Consensus       248 ~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~  327 (410)
T 1vyh_C          248 LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST  327 (410)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred             EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence            3799999999999999999887654 4678899999998521                 146899999999999999998


Q ss_pred             cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415          63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP  142 (174)
Q Consensus        63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~  142 (174)
                      ..+     +.++.+|.. .|++++|+| ++.+|+||+.||+|++||+.                            .   
T Consensus       328 ~~~-----~~~~~~h~~-~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~----------------------------~---  369 (410)
T 1vyh_C          328 GMC-----LMTLVGHDN-WVRGVLFHS-GGKFILSCADDKTLRVWDYK----------------------------N---  369 (410)
T ss_dssp             TEE-----EEEEECCSS-CEEEEEECS-SSSCEEEEETTTEEEEECCT----------------------------T---
T ss_pred             Cce-----EEEEECCCC-cEEEEEEcC-CCCEEEEEeCCCeEEEEECC----------------------------C---
Confidence            654     345568999 999999999 56688999999999999991                            1   


Q ss_pred             cccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         143 MGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       143 ~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                            .+++.++.+|..+|.+++|+|+++.
T Consensus       370 ------~~~~~~~~~h~~~v~~l~~~~~~~~  394 (410)
T 1vyh_C          370 ------KRCMKTLNAHEHFVTSLDFHKTAPY  394 (410)
T ss_dssp             ------SCCCEEEECCSSCEEEEEECSSSSC
T ss_pred             ------CceEEEEcCCCCcEEEEEEcCCCCE
Confidence                  2467888999999999999999864

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.90  E-value=5.3e-23  Score=168.63  Aligned_cols=130  Identities=16%  Similarity=0.116  Sum_probs=98.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-------cc------
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-------KG------   68 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-------~~------   68 (174)
                      +|+|+.|++|+|||+++++++....+...|++|+|+|++   ++|++++.|+ +++|+..+....       +.      
T Consensus       150 ~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg---~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v  225 (365)
T 4h5i_A          150 IASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDG---KVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKI  225 (365)
T ss_dssp             EEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTS---SEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEE
T ss_pred             EEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCC---ceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEE
Confidence            356668999999999999988888888889999999974   7888888655 455554433210       00      


Q ss_pred             ----------------------------------eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc
Q psy6415          69 ----------------------------------FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR  114 (174)
Q Consensus        69 ----------------------------------~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~  114 (174)
                                                        .....+.+|.. .|++++|+| ++.+||+|+.|++|+|||++    
T Consensus       226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~----  299 (365)
T 4h5i_A          226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK-GITSMDVDM-KGELAVLASNDNSIALVKLK----  299 (365)
T ss_dssp             EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS-CEEEEEECT-TSCEEEEEETTSCEEEEETT----
T ss_pred             EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC-CeEeEEECC-CCCceEEEcCCCEEEEEECC----
Confidence                                              00112345777 899999999 56799999999999999991    


Q ss_pred             ccccccceeeeecCCCCCCcccCCCCCccccccccceeee-eeccccceeeeeeCCCCCCC
Q psy6415         115 ADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE-ATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~-~~~h~~~V~~l~~spd~~~~  174 (174)
                                              +         ++++.+ +.+|..+|++|+|||||+-|
T Consensus       300 ------------------------~---------~~~~~~~~~gH~~~V~~v~fSpdg~~l  327 (365)
T 4h5i_A          300 ------------------------D---------LSMSKIFKQAHSFAITEVTISPDSTYV  327 (365)
T ss_dssp             ------------------------T---------TEEEEEETTSSSSCEEEEEECTTSCEE
T ss_pred             ------------------------C---------CcEEEEecCcccCCEEEEEECCCCCEE
Confidence                                    2         345666 58999999999999999743

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.90  E-value=1.3e-22  Score=164.54  Aligned_cols=131  Identities=11%  Similarity=0.125  Sum_probs=105.7

Q ss_pred             CEEEEecCCcEEEEECCCCCe--EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL--KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~--~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||+|+.|++|+|||++++..  ... ..|...|.+|+|+|++   ++|++|+.|++|+|||+++....  .....+.+|
T Consensus        75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~---~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~h  149 (345)
T 3fm0_A           75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG---NLLATCSRDKSVWVWEVDEEDEY--ECVSVLNSH  149 (345)
T ss_dssp             EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEEECTTSCE--EEEEEECCC
T ss_pred             EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC---CEEEEEECCCeEEEEECCCCCCe--EEEEEecCc
Confidence            489999999999999987753  333 3477889999999974   89999999999999999875421  123456689


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|.+++|+| ++.+||+|+.||+|++||++                            .+       ....+.++.+
T Consensus       150 ~~-~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~----------------------------~~-------~~~~~~~~~~  192 (345)
T 3fm0_A          150 TQ-DVKHVVWHP-SQELLASASYDDTVKLYREE----------------------------ED-------DWVCCATLEG  192 (345)
T ss_dssp             CS-CEEEEEECS-SSSCEEEEETTSCEEEEEEE----------------------------TT-------EEEEEEEECC
T ss_pred             CC-CeEEEEECC-CCCEEEEEeCCCcEEEEEec----------------------------CC-------CEEEEEEecC
Confidence            98 999999999 46689999999999999991                            11       1124678899


Q ss_pred             cccceeeeeeCCCCCC
Q psy6415         158 SSQPINSLDWSADKLG  173 (174)
Q Consensus       158 h~~~V~~l~~spd~~~  173 (174)
                      |..+|++|+||||++.
T Consensus       193 h~~~v~~l~~sp~g~~  208 (345)
T 3fm0_A          193 HESTVWSLAFDPSGQR  208 (345)
T ss_dssp             CSSCEEEEEECTTSSE
T ss_pred             CCCceEEEEECCCCCE
Confidence            9999999999999864

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.8e-23  Score=175.96  Aligned_cols=164  Identities=9%  Similarity=0.032  Sum_probs=110.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeE-----------EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK-----------WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG   68 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~-----------~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~   68 (174)
                      +||||+.||+|+|||++++...           .. ..|...|.+++|+|+    +.|++|+.||+|+|||+++...   
T Consensus       227 ~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~----~~lasgs~DgtV~lWD~~~~~~---  299 (524)
T 2j04_B          227 CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP----TTVVCGFKNGFVAEFDLTDPEV---  299 (524)
T ss_dssp             EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS----SEEEEEETTSEEEEEETTBCSS---
T ss_pred             eEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC----CeEEEEeCCCEEEEEECCCCCC---
Confidence            4899999999999999876421           12 235678999999974    6899999999999999987532   


Q ss_pred             eeeeeecccCcCcEEEE--EEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccc--eeeeecCC-CCCCcccC--CCC
Q psy6415          69 FAYLSEKAHKATTVWAA--KHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCS--IFRYSSNY-PTQRTKPD--IDD  140 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v--~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~--~~~~~~~~-~~~~~~~~--~dg  140 (174)
                       ....+.+|.. .|++|  +|+|++..+|||||.||+|+|||+.+...... .++.  .......| |+...++.  .|+
T Consensus       300 -~~~~~~~H~~-~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~  377 (524)
T 2j04_B          300 -PSFYDQVHDS-YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS  377 (524)
T ss_dssp             -CSEEEECSSS-CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred             -ceEEeecccc-cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence             1234568999 99999  56774337999999999999999943100000 0000  00112233 43332222  222


Q ss_pred             Ccccc--ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         141 IPMGV--PGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       141 ~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                       .+.+  ...++.+.++.+|..+|++|+||||++.|
T Consensus       378 -tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l  412 (524)
T 2j04_B          378 -SLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMV  412 (524)
T ss_dssp             -EEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBC
T ss_pred             -cEEEEECcccccceeeecCCCceEEEEeCCCCCeE
Confidence             1111  23345678889999999999999999754

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.89  E-value=3.1e-22  Score=158.85  Aligned_cols=126  Identities=17%  Similarity=0.257  Sum_probs=107.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|++||+.+++..... .|...|.+++|+|++   +.|++++.|++|+|||+++.++.     ..+.+|..
T Consensus        37 ~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~~~  108 (312)
T 4ery_A           37 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS---NLLVSASDDKTLKIWDVSSGKCL-----KTLKGHSN  108 (312)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCEE-----EEEECCSS
T ss_pred             EEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC---CEEEEECCCCEEEEEECCCCcEE-----EEEcCCCC
Confidence            3899999999999999988876654 467889999999974   89999999999999999986543     34568988


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++|+| ++.+|++|+.||+|++||++                            .         ++.+..+.+|.
T Consensus       109 -~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~----------------------------~---------~~~~~~~~~~~  149 (312)
T 4ery_A          109 -YVFCCNFNP-QSNLIVSGSFDESVRIWDVK----------------------------T---------GKCLKTLPAHS  149 (312)
T ss_dssp             -CEEEEEECS-SSSEEEEEETTSCEEEEETT----------------------------T---------CCEEEEECCCS
T ss_pred             -CEEEEEEcC-CCCEEEEEeCCCcEEEEECC----------------------------C---------CEEEEEecCCC
Confidence             999999999 56799999999999999991                            1         24577888999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|.+++|+|+++-
T Consensus       150 ~~v~~~~~~~~~~~  163 (312)
T 4ery_A          150 DPVSAVHFNRDGSL  163 (312)
T ss_dssp             SCEEEEEECTTSSE
T ss_pred             CcEEEEEEcCCCCE
Confidence            99999999999863

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.89  E-value=2.4e-22  Score=171.04  Aligned_cols=125  Identities=16%  Similarity=0.284  Sum_probs=105.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +||+|+.|++|++||+....+.....|...|.+++|+|++   ..||+++.|++|+|||... +     ...++.+|.. 
T Consensus       440 ~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~---~~las~~~d~~i~iw~~~~-~-----~~~~~~~h~~-  509 (577)
T 2ymu_A          440 TIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDG---QTIASASDDKTVKLWNRNG-Q-----LLQTLTGHSS-  509 (577)
T ss_dssp             EEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTS---CEEEEEETTSEEEEEETTS-C-----EEEEEECCSS-
T ss_pred             EEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCC---CEEEEEeCCCEEEEEcCCC-C-----EEEEEeCCCC-
Confidence            4789999999999998654444445678899999999974   8999999999999999643 2     2345679999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+++|+| ++.+||+++.||+|+|||+                             +|         +++.++.+|+.
T Consensus       510 ~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-----------------------------~~---------~~~~~~~~h~~  550 (577)
T 2ymu_A          510 SVRGVAFSP-DGQTIASASDDKTVKLWNR-----------------------------NG---------QLLQTLTGHSS  550 (577)
T ss_dssp             CEEEEEECT-TSSCEEEEETTSEEEEECT-----------------------------TS---------CEEEEEECCSS
T ss_pred             CEEEEEEcC-CCCEEEEEECcCEEEEEeC-----------------------------CC---------CEEEEEcCCCC
Confidence            999999999 5668999999999999999                             32         46889999999


Q ss_pred             ceeeeeeCCCCCCC
Q psy6415         161 PINSLDWSADKLGL  174 (174)
Q Consensus       161 ~V~~l~~spd~~~~  174 (174)
                      +|++++||||++-|
T Consensus       551 ~v~~~~fs~dg~~l  564 (577)
T 2ymu_A          551 SVWGVAFSPDGQTI  564 (577)
T ss_dssp             CEEEEEECTTSSCE
T ss_pred             CEEEEEEcCCCCEE
Confidence            99999999999754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.89  E-value=4.4e-22  Score=160.90  Aligned_cols=104  Identities=17%  Similarity=0.288  Sum_probs=84.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-------c-----
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-------K-----   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-------~-----   67 (174)
                      +|+||+.|++|+|||++++++...+ .|...|++++|+|++   +.|++++.|++|+|||++.....       +     
T Consensus        90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~  166 (343)
T 2xzm_R           90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN---RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS  166 (343)
T ss_dssp             EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST---TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC---CEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence            3789999999999999999877654 477889999999974   89999999999999998632100       0     


Q ss_pred             ------------------ce------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          68 ------------------GF------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        68 ------------------~~------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                                        .+                  ....+.+|.. .|++++|+| ++.+||||+.||+|++||+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~-~v~~~~~s~-~g~~l~sgs~dg~v~iwd~  242 (343)
T 2xzm_R          167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHES-NVNHLSISP-NGKYIATGGKDKKLLIWDI  242 (343)
T ss_dssp             EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSS-CEEEEEECT-TSSEEEEEETTCEEEEEES
T ss_pred             eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccc-cceEEEECC-CCCEEEEEcCCCeEEEEEC
Confidence                              00                  1123457888 999999999 5679999999999999999

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.89  E-value=1.2e-22  Score=169.23  Aligned_cols=128  Identities=14%  Similarity=0.168  Sum_probs=101.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||+|+.||+|+|||+.++.....   ..|...|++|+|+|.+  +++|+|||.|++|+|||+++.... .  ......+
T Consensus       134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~--~~~l~s~s~D~~v~iwd~~~~~~~-~--~~~~~~~  208 (435)
T 4e54_B          134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN--TNQFYASSMEGTTRLQDFKGNILR-V--FASSDTI  208 (435)
T ss_dssp             CEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC--TTEEEEECSSSCEEEEETTSCEEE-E--EECCSSC
T ss_pred             EEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC--CCEEEEEeCCCEEEEeeccCCcee-E--EeccCCC
Confidence            589999999999999987764332   3477899999999853  489999999999999999875321 1  1111233


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .+.+++|+| ++.+||+|+.||+|++||+                             +|         +.+.++.+
T Consensus       209 ~~-~~~~~~~~~-~~~~l~~g~~dg~i~~wd~-----------------------------~~---------~~~~~~~~  248 (435)
T 4e54_B          209 NI-WFCSLDVSA-SSRMVVTGDNVGNVILLNM-----------------------------DG---------KELWNLRM  248 (435)
T ss_dssp             SC-CCCCEEEET-TTTEEEEECSSSBEEEEES-----------------------------SS---------CBCCCSBC
T ss_pred             Cc-cEEEEEECC-CCCEEEEEeCCCcEeeecc-----------------------------Cc---------ceeEEEec
Confidence            44 678999999 5679999999999999999                             22         34677889


Q ss_pred             cccceeeeeeCCCCCC
Q psy6415         158 SSQPINSLDWSADKLG  173 (174)
Q Consensus       158 h~~~V~~l~~spd~~~  173 (174)
                      |..+|++|+|+|+++.
T Consensus       249 h~~~v~~v~~~p~~~~  264 (435)
T 4e54_B          249 HKKKVTHVALNPCCDW  264 (435)
T ss_dssp             CSSCEEEEEECTTCSS
T ss_pred             ccceEEeeeecCCCce
Confidence            9999999999999864

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.89  E-value=5.4e-22  Score=157.58  Aligned_cols=140  Identities=12%  Similarity=0.130  Sum_probs=103.1

Q ss_pred             CEEEEecCCcEEEEECCCCC---eEEEeecCCCEEEEEecCCCC----------CCCEEEEEeCCCcEEEEECCCccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS---LKWETNLKNGVCGVDFDRRDI----------PMNKLVATTLEAKLFVFDLKTLHREK   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~---~~~~~~~~~~V~sv~f~~~~~----------~~~~l~s~s~Dg~I~iWD~~~~~~~~   67 (174)
                      +||+|+.||+|++||++++.   ......|...|++++|+|+..          +++.||+|+.|++|+|||+++.....
T Consensus       115 ~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~  194 (297)
T 2pm7_B          115 MLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY  194 (297)
T ss_dssp             EEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEE
T ss_pred             EEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE
Confidence            48999999999999998763   222345778899999999621          13689999999999999998754211


Q ss_pred             ceeeeeecccCcCcEEEEEEcCCC--CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          68 GFAYLSEKAHKATTVWAAKHLPQN--RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        68 ~~~~~~~~~h~~~~i~~v~fsP~~--~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                       ....++.+|.. .|++|+|+|++  +.+||||+.|++|+|||+++    .                      .+..   
T Consensus       195 -~~~~~l~~H~~-~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~----~----------------------~~~~---  243 (297)
T 2pm7_B          195 -VLESTLEGHSD-WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN----E----------------------QGPW---  243 (297)
T ss_dssp             -EEEEEECCCSS-CEEEEEECCCCSSSEEEEEEETTSCEEEEEESS----T----------------------TSCC---
T ss_pred             -EEEEEecCCCC-ceEEEEECCCCCCceEEEEEECCCcEEEEEeCC----C----------------------CCcc---
Confidence             12346679999 99999999964  57999999999999999911    0                      0000   


Q ss_pred             ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                         ...+....+|..+|++++||||++-|
T Consensus       244 ---~~~~~~~~~~~~~v~~~~~s~~g~~l  269 (297)
T 2pm7_B          244 ---KKTLLKEEKFPDVLWRASWSLSGNVL  269 (297)
T ss_dssp             ---EEEESSSSCCSSCEEEEEECSSSCCE
T ss_pred             ---ceeeeecccCCCcEEEEEECCCCCEE
Confidence               00111225788999999999998753

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.89  E-value=7.5e-22  Score=155.46  Aligned_cols=170  Identities=13%  Similarity=0.133  Sum_probs=109.0

Q ss_pred             CEEEEecCCcEEEEECCCCC---------eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce-
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS---------LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF-   69 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~---------~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~-   69 (174)
                      +|++|+.||+|++||+++++         .... ..|...|.+++|+|+. .++.|++++.|++|+|||+++.+....+ 
T Consensus        73 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  151 (351)
T 3f3f_A           73 IIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH-LGLKLACLGNDGILRLYDALEPSDLRSWT  151 (351)
T ss_dssp             EEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred             EEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCC-CCcEEEEecCCCcEEEecCCChHHhcccc
Confidence            48999999999999998863         2333 3467889999999961 1389999999999999999876532211 


Q ss_pred             ------------------------------------------------------eeeeecccCcCcEEEEEEcCCCC---
Q psy6415          70 ------------------------------------------------------AYLSEKAHKATTVWAAKHLPQNR---   92 (174)
Q Consensus        70 ------------------------------------------------------~~~~~~~h~~~~i~~v~fsP~~~---   92 (174)
                                                                            ....+.+|.. .|++++|+|+++   
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~~  230 (351)
T 3f3f_A          152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS-LIRSISWAPSIGRWY  230 (351)
T ss_dssp             EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS-CEEEEEECCCSSCSS
T ss_pred             ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc-ceeEEEECCCCCCcc
Confidence                                                                  1234557888 999999999642   


Q ss_pred             CEEEEEcCCCcEEEEeccccccccccccceeeee--cCC-CCCCcccC--CCCCccc-----cccccceeeeeeccccce
Q psy6415          93 DLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYS--SNY-PTQRTKPD--IDDIPMG-----VPGSLTLLQEATLSSQPI  162 (174)
Q Consensus        93 ~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~--~dg~~~~-----~~~~~~ll~~~~~h~~~V  162 (174)
                      .+||+|+.||+|++||+.+..+..... ......  ... +.......  .++....     ...+.+++.++.+|..+|
T Consensus       231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v  309 (351)
T 3f3f_A          231 QLIATGCKDGRIRIFKITEKLSPLASE-ESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV  309 (351)
T ss_dssp             EEEEEEETTSCEEEEEEEECC----------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred             eEEEEEcCCCeEEEEeCCCCcCccccC-CcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence            699999999999999994311100000 000000  000 00000000  0000000     012346889999999999


Q ss_pred             eeeeeCCCCCC
Q psy6415         163 NSLDWSADKLG  173 (174)
Q Consensus       163 ~~l~~spd~~~  173 (174)
                      ++++|+||++-
T Consensus       310 ~~~~~s~~~~~  320 (351)
T 3f3f_A          310 WSVSWNLTGTI  320 (351)
T ss_dssp             EEEEECSSSCC
T ss_pred             EEEEEcCCCCE
Confidence            99999999864

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.89  E-value=5.4e-22  Score=163.49  Aligned_cols=133  Identities=11%  Similarity=0.178  Sum_probs=102.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|+|||++++++.... .|...|++++|+|++   +.|++++.|++|+|||+++.++..     .+ .+..
T Consensus       137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~v~iwd~~~~~~~~-----~~-~~~~  207 (393)
T 1erj_A          137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG---DKLVSGSGDRTVRIWDLRTGQCSL-----TL-SIED  207 (393)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEE-----EE-ECSS
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC---CEEEEecCCCcEEEEECCCCeeEE-----EE-EcCC
Confidence            4899999999999999998876654 477889999999974   899999999999999999865432     22 3556


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .+.+++|+|.++.+||+|+.||+|++||+++                            |..+...  ........+|.
T Consensus       208 -~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~----------------------------~~~~~~~--~~~~~~~~~h~  256 (393)
T 1erj_A          208 -GVTTVAVSPGDGKYIAAGSLDRAVRVWDSET----------------------------GFLVERL--DSENESGTGHK  256 (393)
T ss_dssp             -CEEEEEECSTTCCEEEEEETTSCEEEEETTT----------------------------CCEEEEE--C------CCCS
T ss_pred             -CcEEEEEECCCCCEEEEEcCCCcEEEEECCC----------------------------CcEEEee--cccccCCCCCC
Confidence             7999999997778999999999999999911                            1000000  00012236899


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|++++|+||++.
T Consensus       257 ~~v~~v~~~~~g~~  270 (393)
T 1erj_A          257 DSVYSVVFTRDGQS  270 (393)
T ss_dssp             SCEEEEEECTTSSE
T ss_pred             CCEEEEEECCCCCE
Confidence            99999999999864

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.89  E-value=6e-22  Score=172.07  Aligned_cols=167  Identities=14%  Similarity=0.169  Sum_probs=111.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee--eeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY--LSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~--~~~~~h~   78 (174)
                      ||+|+.|++|++||.+++++...+ .|...|++|+|+|++   +.||+|+.|++|+|||+++.++...+..  ....+|.
T Consensus       163 l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg---~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~  239 (611)
T 1nr0_A          163 IISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG---SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS  239 (611)
T ss_dssp             EEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred             EEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC---CEEEEEECCCcEEEEECCCCcEeeeeccccccccccC
Confidence            899999999999999988776654 477889999999974   8999999999999999988664322110  0011799


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-c---ccceeeeecCC-CCCCcccCCCCCcccc-cccccee
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-N---LCSIFRYSSNY-PTQRTKPDIDDIPMGV-PGSLTLL  152 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~---~~~~~~~~~~~-~~~~~~~~~dg~~~~~-~~~~~ll  152 (174)
                      . .|++++|+| ++.+||||+.|++|+|||+++.....+ +   ......+...+ +........||..... ....+.+
T Consensus       240 ~-~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~  317 (611)
T 1nr0_A          240 G-SVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSID  317 (611)
T ss_dssp             S-CEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEE
T ss_pred             C-CEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcc
Confidence            8 999999999 567999999999999999943110000 0   00000000000 0000001123311100 1223466


Q ss_pred             eeeeccccceeeeeeCCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~~  173 (174)
                      ..+.+|..+|++++|||||+-
T Consensus       318 ~~~~gh~~~v~~l~~spdg~~  338 (611)
T 1nr0_A          318 QVRYGHNKAITALSSSADGKT  338 (611)
T ss_dssp             EEECCCSSCEEEEEECTTSSE
T ss_pred             eEEcCCCCCEEEEEEeCCCCE
Confidence            788899999999999999863

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.89  E-value=7.5e-22  Score=160.86  Aligned_cols=127  Identities=16%  Similarity=0.228  Sum_probs=101.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-------------------------------------------------ecCCCE
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-------------------------------------------------NLKNGV   31 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-------------------------------------------------~~~~~V   31 (174)
                      +||||+.||+|+|||..++......                                                 .|...|
T Consensus        78 ~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v  157 (354)
T 2pbi_B           78 RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYL  157 (354)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCE
T ss_pred             EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcE
Confidence            3789999999999998766543211                                                 244567


Q ss_pred             EEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCC-CCCEEEEEcCCCcEEEEecc
Q psy6415          32 CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQ-NRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        32 ~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~-~~~~las~s~Dg~V~lWd~~  110 (174)
                      .+++|+|++   ..|++++.|++|+|||+++.++     +.++.+|.. .|.+++|+|. ++.+|+||+.||+|++||++
T Consensus       158 ~~~~~~~~~---~~l~t~s~D~~v~lwd~~~~~~-----~~~~~~h~~-~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~  228 (354)
T 2pbi_B          158 SACSFTNSD---MQILTASGDGTCALWDVESGQL-----LQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWDMR  228 (354)
T ss_dssp             EEEEECSSS---SEEEEEETTSEEEEEETTTCCE-----EEEEECCSS-CEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred             EEEEEeCCC---CEEEEEeCCCcEEEEeCCCCeE-----EEEEcCCCC-CeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence            888888864   7899999999999999998654     345568998 9999999985 35799999999999999991


Q ss_pred             ccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         111 SALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                                                  .         ++.+.++.+|..+|++++|+|++..
T Consensus       229 ----------------------------~---------~~~~~~~~~h~~~v~~v~~~p~~~~  254 (354)
T 2pbi_B          229 ----------------------------S---------GQCVQAFETHESDVNSVRYYPSGDA  254 (354)
T ss_dssp             ----------------------------T---------CCEEEEECCCSSCEEEEEECTTSSE
T ss_pred             ----------------------------C---------CcEEEEecCCCCCeEEEEEeCCCCE
Confidence                                        1         2467888999999999999999863

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.88  E-value=4.3e-22  Score=159.80  Aligned_cols=123  Identities=10%  Similarity=0.150  Sum_probs=101.8

Q ss_pred             CEEEEecCCcEEEEECCCCC-----eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-----LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-----~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +|+||+.|++|++||+.+..     .... ..|...|.+++|+|++   ++|++|+.|++|+|||++++++     ...+
T Consensus        32 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg---~~l~s~s~D~~v~~wd~~~~~~-----~~~~  103 (319)
T 3frx_A           32 LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG---AYALSASWDKTLRLWDVATGET-----YQRF  103 (319)
T ss_dssp             EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEE-----EEEE
T ss_pred             EEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC---CEEEEEeCCCEEEEEECCCCCe-----eEEE
Confidence            48999999999999986432     1222 3577899999999974   8999999999999999998754     3455


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                      .+|.. .|++++|+| ++.+|+||+.||+|++||+                             .|         +.+.+
T Consensus       104 ~~h~~-~v~~~~~~~-~~~~l~s~s~D~~i~vwd~-----------------------------~~---------~~~~~  143 (319)
T 3frx_A          104 VGHKS-DVMSVDIDK-KASMIISGSRDKTIKVWTI-----------------------------KG---------QCLAT  143 (319)
T ss_dssp             ECCSS-CEEEEEECT-TSCEEEEEETTSCEEEEET-----------------------------TS---------CEEEE
T ss_pred             ccCCC-cEEEEEEcC-CCCEEEEEeCCCeEEEEEC-----------------------------CC---------CeEEE
Confidence            68999 999999999 5679999999999999999                             21         24677


Q ss_pred             eeccccceeeeeeCCCC
Q psy6415         155 ATLSSQPINSLDWSADK  171 (174)
Q Consensus       155 ~~~h~~~V~~l~~spd~  171 (174)
                      +.+|..+|.++.|+|+.
T Consensus       144 ~~~h~~~v~~~~~~~~~  160 (319)
T 3frx_A          144 LLGHNDWVSQVRVVPNE  160 (319)
T ss_dssp             ECCCSSCEEEEEECCC-
T ss_pred             EeccCCcEEEEEEccCC
Confidence            88999999999999964

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.88  E-value=4.1e-23  Score=178.03  Aligned_cols=162  Identities=11%  Similarity=0.027  Sum_probs=104.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecC--CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLK--NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~--~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||||+.|++|||||++++++.... .+.  ..|.+|+|+|++   +.|++++.|++|+|||+++..+.     .++.+|
T Consensus       325 ~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~---~~l~s~~~d~tv~lwd~~~~~~~-----~~l~gH  396 (524)
T 2j04_B          325 VVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI---YSYIYSDGASSLRAVPSRAAFAV-----HPLVSR  396 (524)
T ss_dssp             EEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT---TEEEEECSSSEEEEEETTCTTCC-----EEEEEC
T ss_pred             EEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc---CeEEEeCCCCcEEEEECcccccc-----eeeecC
Confidence            4799999999999999987654332 232  248899999974   78999999999999999986543     345689


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc-cc----ccceeeeecCC-CCCCcccCCCCCcccc-ccccc
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD-TN----LCSIFRYSSNY-PTQRTKPDIDDIPMGV-PGSLT  150 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~-~~----~~~~~~~~~~~-~~~~~~~~~dg~~~~~-~~~~~  150 (174)
                      .. .|++|+|||+ +.+||||+.||+|+|||+....-.. +.    ....+.+..++ |++....-.++-.+.. ..+++
T Consensus       397 ~~-~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~  474 (524)
T 2j04_B          397 ET-TITAIGVSRL-HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDV  474 (524)
T ss_dssp             SS-CEEEEECCSS-CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC------
T ss_pred             CC-ceEEEEeCCC-CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCc
Confidence            99 9999999995 5688999999999999983311110 00    01112334455 4332111111100000 01345


Q ss_pred             eeeeeeccccceeeeeeCCCCC
Q psy6415         151 LLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       151 ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      ++.++.+|..+|++++|||+++
T Consensus       475 ~~~~l~gh~~~V~~Vafsp~~~  496 (524)
T 2j04_B          475 SKAKIDAHGINITCTKWNETSA  496 (524)
T ss_dssp             -------CCCSCCCEEECCSTT
T ss_pred             ceeeecCCCceEEEEECCCCCC
Confidence            7889999999999999999975

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.88  E-value=3.2e-22  Score=164.18  Aligned_cols=136  Identities=18%  Similarity=0.202  Sum_probs=96.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCC--------------------------------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDI--------------------------------------   41 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~--------------------------------------   41 (174)
                      +||||+.||+|+|||+.+++..... .|...|.+++|+|++.                                      
T Consensus        80 ~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~  159 (380)
T 3iz6_a           80 WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGY  159 (380)
T ss_dssp             CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSC
T ss_pred             EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcc
Confidence            4899999999999999888765543 3445566666666430                                      


Q ss_pred             ---------CCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccc
Q psy6415          42 ---------PMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSA  112 (174)
Q Consensus        42 ---------~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~  112 (174)
                               ....|++|+.|++|+|||+++.++...+......+|.. .|.+++|+|.++.+|+||+.||+|++||+   
T Consensus       160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~sgs~D~~v~~wd~---  235 (380)
T 3iz6_a          160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA-DVLSLSINSLNANMFISGSCDTTVRLWDL---  235 (380)
T ss_dssp             CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS-CEEEEEECSSSCCEEEEEETTSCEEEEET---
T ss_pred             eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc-CeEEEEeecCCCCEEEEEECCCeEEEEEC---
Confidence                     02346666666666666666554332111111247888 99999999877889999999999999999   


Q ss_pred             ccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         113 LRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                       |                        .        ..+.+.++.+|..+|++++|+||++-
T Consensus       236 -~------------------------~--------~~~~~~~~~~h~~~v~~v~~~p~~~~  263 (380)
T 3iz6_a          236 -R------------------------I--------TSRAVRTYHGHEGDINSVKFFPDGQR  263 (380)
T ss_dssp             -T------------------------T--------TCCCCEEECCCSSCCCEEEECTTSSE
T ss_pred             -C------------------------C--------CCcceEEECCcCCCeEEEEEecCCCe
Confidence             1                        0        01357788999999999999999863

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.88  E-value=4.1e-21  Score=152.33  Aligned_cols=164  Identities=13%  Similarity=0.132  Sum_probs=114.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||++++++..... |...|.+++|+|++   +.|++++.|+.|++||+++.++...+    ...|..
T Consensus       121 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~----~~~~~~  193 (312)
T 4ery_A          121 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG---SLIVSSSYDGLCRIWDTASGQCLKTL----IDDDNP  193 (312)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEEE----CCSSCC
T ss_pred             EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCceeeEE----eccCCC
Confidence            47999999999999999998776654 66789999999974   89999999999999999986543221    234556


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc---ccccceeee--ecCCCCCCcc--cCCCCCcc-ccccccce
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD---TNLCSIFRY--SSNYPTQRTK--PDIDDIPM-GVPGSLTL  151 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~---~~~~~~~~~--~~~~~~~~~~--~~~dg~~~-~~~~~~~l  151 (174)
                       .+..++|+| ++.+|++++.||.|++||+.+.....   .........  ....+.+..+  ...||... -...+.++
T Consensus       194 -~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~  271 (312)
T 4ery_A          194 -PVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI  271 (312)
T ss_dssp             -CEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE
T ss_pred             -ceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh
Confidence             899999999 56789999999999999994311100   000000000  0000111111  22344211 11355678


Q ss_pred             eeeeeccccceeeeeeCCCCCC
Q psy6415         152 LQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       152 l~~~~~h~~~V~~l~~spd~~~  173 (174)
                      +.++.+|..+|.+++|+|+++.
T Consensus       272 ~~~~~~h~~~v~~~~~~p~~~~  293 (312)
T 4ery_A          272 VQKLQGHTDVVISTACHPTENI  293 (312)
T ss_dssp             EEEECCCSSCEEEEEECSSSSE
T ss_pred             hhhhhccCCcEEEEeecCcCCc
Confidence            9999999999999999999863

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.88  E-value=5.8e-22  Score=162.87  Aligned_cols=130  Identities=15%  Similarity=0.128  Sum_probs=94.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-c---CCCEEEEEecCCCCCCCEE------------EEEeCCCcEEEEECCCcc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-L---KNGVCGVDFDRRDIPMNKL------------VATTLEAKLFVFDLKTLH   64 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~---~~~V~sv~f~~~~~~~~~l------------~s~s~Dg~I~iWD~~~~~   64 (174)
                      +||||+.|++|||||+++++++..+. +   ...|++++|+|++   ..+            ++|+.|++||+||.++..
T Consensus       195 ~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG---~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk  271 (356)
T 2w18_A          195 ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG---LLFIVLSHPCAKESESLRSPVFQLIVINPKTTL  271 (356)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT---EEEEEEC------------CCEEEEEEETTTTE
T ss_pred             eEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC---CEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence            38899999999999999999887664 2   2468888999974   544            678999999999999876


Q ss_pred             cccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccc
Q psy6415          65 REKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMG  144 (174)
Q Consensus        65 ~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~  144 (174)
                      ....+......+|.. .+.+..++   +.++|+|+.||+|+|||++                                  
T Consensus       272 ~l~v~~~~~p~Gh~~-~~lsg~~s---g~~lASgS~DgTIkIWDl~----------------------------------  313 (356)
T 2w18_A          272 SVGVMLYCLPPGQAG-RFLEGDVK---DHCAAAILTSGTIAIWDLL----------------------------------  313 (356)
T ss_dssp             EEEEEEECCCTTCCC-CEEEEEEE---TTEEEEEETTSCEEEEETT----------------------------------
T ss_pred             EEEEEEeeccCCCcc-eeEccccC---CCEEEEEcCCCcEEEEECC----------------------------------
Confidence            443221111246766 66665554   4689999999999999991                                  


Q ss_pred             cccccceeeeeecccccee-eeeeCCCCCCC
Q psy6415         145 VPGSLTLLQEATLSSQPIN-SLDWSADKLGL  174 (174)
Q Consensus       145 ~~~~~~ll~~~~~h~~~V~-~l~~spd~~~~  174 (174)
                         ++++++++.+|...|. +++|||||+-|
T Consensus       314 ---tGk~l~tL~gH~~~vvs~vafSPDG~~L  341 (356)
T 2w18_A          314 ---LGQCTALLPPVSDQHWSFVKWSGTDSHL  341 (356)
T ss_dssp             ---TCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred             ---CCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence               2468999999998766 48999999743

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.87  E-value=1.5e-21  Score=171.34  Aligned_cols=162  Identities=12%  Similarity=0.119  Sum_probs=113.9

Q ss_pred             CEEEEecCCcEEEEECCCCC-----eEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-----LKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-----~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +|+||+.||+|+|||+++..     ... ...|...|.+|+|+|++   +.|++|+.|++|+|||+++..+     ...+
T Consensus       397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g---~~l~sgs~Dg~v~vwd~~~~~~-----~~~~  468 (694)
T 3dm0_A          397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG---QFALSGSWDGELRLWDLAAGVS-----TRRF  468 (694)
T ss_dssp             EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEE-----EEEE
T ss_pred             EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC---CEEEEEeCCCcEEEEECCCCcc-----eeEE
Confidence            48999999999999997643     222 24577889999999974   8999999999999999998653     3345


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc----ccccccceeeeecCC-CCCC--cc--cCCCCCcccc
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR----ADTNLCSIFRYSSNY-PTQR--TK--PDIDDIPMGV  145 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~----~~~~~~~~~~~~~~~-~~~~--~~--~~~dg~~~~~  145 (174)
                      .+|.. .|++++|+|+ +..|+|||.|++|++||+.....    .....+........+ |...  .+  .+.||. +.+
T Consensus       469 ~~h~~-~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~-v~v  545 (694)
T 3dm0_A          469 VGHTK-DVLSVAFSLD-NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT-VKV  545 (694)
T ss_dssp             ECCSS-CEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC-EEE
T ss_pred             eCCCC-CEEEEEEeCC-CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe-EEE
Confidence            68999 9999999995 56889999999999999832111    000111111222222 2221  11  113432 111


Q ss_pred             --ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         146 --PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       146 --~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                        ....+++.++.+|..+|++++||||++-
T Consensus       546 wd~~~~~~~~~~~~h~~~v~~v~~spdg~~  575 (694)
T 3dm0_A          546 WNLSNCKLRSTLAGHTGYVSTVAVSPDGSL  575 (694)
T ss_dssp             EETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred             EECCCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence              2345678899999999999999999863

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.87  E-value=2.5e-21  Score=161.18  Aligned_cols=143  Identities=17%  Similarity=0.270  Sum_probs=109.5

Q ss_pred             CEEEEecCCcEEEEECCCC---CeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTM---SLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~---~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|++|+.||.|++||++++   ..... ..|...|++|+|+|++  ...|++|+.||+|+|||+++...    .+..+..
T Consensus       246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~--~~~l~tg~~dg~v~vwd~~~~~~----~~~~~~~  319 (430)
T 2xyi_A          246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS--EFILATGSADKTVALWDLRNLKL----KLHSFES  319 (430)
T ss_dssp             EEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC--TTEEEEEETTSEEEEEETTCTTS----CSEEEEC
T ss_pred             EEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC--CCEEEEEeCCCeEEEEeCCCCCC----CeEEeec
Confidence            4789999999999999987   33333 3577889999999974  34789999999999999997431    2345568


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT  156 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~  156 (174)
                      |.. .|++++|+|++..+||+++.||+|+|||+....+.                ......++|       ..++++.+.
T Consensus       320 h~~-~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~----------------~~~~~~~~~-------~~~~~~~~~  375 (430)
T 2xyi_A          320 HKD-EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE----------------QSTEDAEDG-------PPELLFIHG  375 (430)
T ss_dssp             CSS-CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC----------------CCHHHHHHC-------CTTEEEECC
T ss_pred             CCC-CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc----------------cCccccccC-------CcceEEEcC
Confidence            988 99999999987789999999999999999210000                000000112       236899999


Q ss_pred             ccccceeeeeeCCCCCC
Q psy6415         157 LSSQPINSLDWSADKLG  173 (174)
Q Consensus       157 ~h~~~V~~l~~spd~~~  173 (174)
                      +|..+|++|+|+|++++
T Consensus       376 ~h~~~v~~~~~~p~~~~  392 (430)
T 2xyi_A          376 GHTAKISDFSWNPNEPW  392 (430)
T ss_dssp             CCSSCEEEEEECSSSTT
T ss_pred             CCCCCceEEEECCCCCC
Confidence            99999999999999874

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.87  E-value=2.9e-21  Score=156.12  Aligned_cols=125  Identities=19%  Similarity=0.239  Sum_probs=104.2

Q ss_pred             CEEEEecCCcEEEEECCCCC----eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS----LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~----~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      +||+|+.|+.|++||+++..    .... ..|...|.++.|+++    +.|++++.|++|++||+++.++     ..++.
T Consensus       111 ~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~l~s~s~d~~i~~wd~~~~~~-----~~~~~  181 (340)
T 1got_B          111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD----NQIVTSSGDTTCALWDIETGQQ-----TTTFT  181 (340)
T ss_dssp             EEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET----TEEEEEETTSCEEEEETTTTEE-----EEEEC
T ss_pred             EEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC----CcEEEEECCCcEEEEECCCCcE-----EEEEc
Confidence            37999999999999998764    2222 346788999999985    6799999999999999998653     34556


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA  155 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~  155 (174)
                      +|.. .|++++|+| ++.+|++|+.||+|++||+.                            .         ++.+.++
T Consensus       182 ~h~~-~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~----------------------------~---------~~~~~~~  222 (340)
T 1got_B          182 GHTG-DVMSLSLAP-DTRLFVSGACDASAKLWDVR----------------------------E---------GMCRQTF  222 (340)
T ss_dssp             CCSS-CEEEEEECT-TSSEEEEEETTSCEEEEETT----------------------------T---------CSEEEEE
T ss_pred             CCCC-ceEEEEECC-CCCEEEEEeCCCcEEEEECC----------------------------C---------CeeEEEE
Confidence            8999 999999999 56799999999999999991                            1         2467888


Q ss_pred             eccccceeeeeeCCCCCC
Q psy6415         156 TLSSQPINSLDWSADKLG  173 (174)
Q Consensus       156 ~~h~~~V~~l~~spd~~~  173 (174)
                      .+|..+|++++|+|++..
T Consensus       223 ~~h~~~v~~v~~~p~~~~  240 (340)
T 1got_B          223 TGHESDINAICFFPNGNA  240 (340)
T ss_dssp             CCCSSCEEEEEECTTSSE
T ss_pred             cCCcCCEEEEEEcCCCCE
Confidence            999999999999999863

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.87  E-value=7.2e-22  Score=164.54  Aligned_cols=129  Identities=15%  Similarity=0.176  Sum_probs=102.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec---CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL---KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~---~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|+||+.||+|+|||++++.+.....+   ...+++++|+|++   +.|++|+.||+|++||++...      +.++.+|
T Consensus       179 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~g~~dg~i~~wd~~~~~------~~~~~~h  249 (435)
T 4e54_B          179 QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS---RMVVTGDNVGNVILLNMDGKE------LWNLRMH  249 (435)
T ss_dssp             EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT---TEEEEECSSSBEEEEESSSCB------CCCSBCC
T ss_pred             EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC---CEEEEEeCCCcEeeeccCcce------eEEEecc
Confidence            489999999999999998765443322   3457899999974   899999999999999998642      3345689


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|++++|+|++..+||+|+.||+|+|||+.+    .                      .+        ...+....+
T Consensus       250 ~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~----~----------------------~~--------~~~~~~~~~  294 (435)
T 4e54_B          250 KK-KVTHVALNPCCDWFLATASVDQTVKIWDLRQ----V----------------------RG--------KASFLYSLP  294 (435)
T ss_dssp             SS-CEEEEEECTTCSSEEEEEETTSBCCEEETTT----C----------------------CS--------SSCCSBCCB
T ss_pred             cc-eEEeeeecCCCceEEEEecCcceeeEEeccc----c----------------------cc--------cceEEEeee
Confidence            99 9999999998778999999999999999911    0                      00        012334468


Q ss_pred             cccceeeeeeCCCCCC
Q psy6415         158 SSQPINSLDWSADKLG  173 (174)
Q Consensus       158 h~~~V~~l~~spd~~~  173 (174)
                      |..+|++++|||||+-
T Consensus       295 h~~~v~~~~~spdg~~  310 (435)
T 4e54_B          295 HRHPVNAACFSPDGAR  310 (435)
T ss_dssp             CSSCEEECCBCTTSSE
T ss_pred             ccccccceeECCCCCe
Confidence            9999999999999864

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.87  E-value=3.7e-21  Score=167.12  Aligned_cols=129  Identities=11%  Similarity=0.200  Sum_probs=103.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe--------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce---
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET--------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF---   69 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~--------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~---   69 (174)
                      +||||+.|++|+|||++++++...+        .|...|.+|+|+|++   ++|++++.|++|+|||+++.++...+   
T Consensus       204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg---~~l~s~s~D~~v~lWd~~~~~~~~~~~~~  280 (611)
T 1nr0_A          204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG---TKIASASADKTIKIWNVATLKVEKTIPVG  280 (611)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC---CEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence            4899999999999999999877654        477889999999974   89999999999999999876543221   


Q ss_pred             -----------------------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccc
Q psy6415          70 -----------------------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALR  114 (174)
Q Consensus        70 -----------------------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~  114 (174)
                                                         ....+.+|.. .|++++|+| ++.+||||+.||+|++||++    
T Consensus       281 ~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~-~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~----  354 (611)
T 1nr0_A          281 TRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK-AITALSSSA-DGKTLFSADAEGHINSWDIS----  354 (611)
T ss_dssp             SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS-CEEEEEECT-TSSEEEEEETTSCEEEEETT----
T ss_pred             CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC-CEEEEEEeC-CCCEEEEEeCCCcEEEEECC----
Confidence                                               1123458988 999999999 56799999999999999991    


Q ss_pred             ccccccceeeeecCCCCCCcccCCCCCccccccccceeeee-eccccceeeeeeCCCC
Q psy6415         115 ADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA-TLSSQPINSLDWSADK  171 (174)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~-~~h~~~V~~l~~spd~  171 (174)
                                              .|         +.+..+ .+|...|.+++|+|++
T Consensus       355 ------------------------~~---------~~~~~~~~~h~~~v~~~~~s~~~  379 (611)
T 1nr0_A          355 ------------------------TG---------ISNRVFPDVHATMITGIKTTSKG  379 (611)
T ss_dssp             ------------------------TC---------CEEECSSCSCSSCEEEEEECTTS
T ss_pred             ------------------------CC---------ceeeecccCCcceEEEEEECCCC
Confidence                                    11         122233 5788999999999875

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.87  E-value=8.7e-22  Score=162.56  Aligned_cols=170  Identities=12%  Similarity=0.108  Sum_probs=108.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee---------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA---------   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~---------   70 (174)
                      +||||+.|++|||||++++.... ...+...|.+|+|+|++  .++|++|+.|++|+|||+++........         
T Consensus       158 ~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~--~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~  235 (393)
T 4gq1_A          158 VIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSN--PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW  235 (393)
T ss_dssp             EEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTE--EEEEEEEETTSEEEEEETTCCC----------CSCCC
T ss_pred             EEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCC--CceEEecCCCCEEEEEECCCCcccccccccCCcccce
Confidence            48999999999999998776544 45688899999999974  3579999999999999999864321110         


Q ss_pred             -----------eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccce----------eeee--
Q psy6415          71 -----------YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCSI----------FRYS--  126 (174)
Q Consensus        71 -----------~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~~----------~~~~--  126 (174)
                                 .....+|.. .|.+++|++.++..|++++.|++|++||+.+.....+ .....          .+..  
T Consensus       236 ~~s~~~~~~~~~~~~~~~~~-~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  314 (393)
T 4gq1_A          236 LLTLNTLPLVNTCHSSGIAS-SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL  314 (393)
T ss_dssp             SEEEESGGGC------CCSS-SCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred             EEecccccceeeeecccccc-cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence                       001235777 8999999855778999999999999999954211100 00000          0000  


Q ss_pred             cCC-------C--CCCcc--cCCCCCcccc--ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         127 SNY-------P--TQRTK--PDIDDIPMGV--PGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       127 ~~~-------~--~~~~~--~~~dg~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      ..+       |  +...+  ...||. +.+  ..+++.+..+.+|..+|++|+|||||+-|
T Consensus       315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~-V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~L  374 (393)
T 4gq1_A          315 FPSLLGACPHPRYMDYFATAHSQHGL-IQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHL  374 (393)
T ss_dssp             SCCSSCCEECSSCTTEEEEEETTTTE-EEEEETTCTTCCEEEEECSSCEEEEEECTTSSEE
T ss_pred             cCcceeEEEccCCCCEEEEEECCCCE-EEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEE
Confidence            000       0  00000  112331 111  23446677788899999999999999753

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.87  E-value=1.3e-21  Score=156.83  Aligned_cols=132  Identities=13%  Similarity=0.205  Sum_probs=102.9

Q ss_pred             CEEEEecCCcEEEEECCCCCe--EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL--KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~--~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||||+.|++|+|||++++..  ... ..|...|++|+|+|.. +++.|++|+.|++|+|||+++.+..   ....+.+|
T Consensus        27 ~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~-~~~~l~s~s~D~~v~iWd~~~~~~~---~~~~~~~h  102 (316)
T 3bg1_A           27 RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM-YGNILASCSYDRKVIIWREENGTWE---KSHEHAGH  102 (316)
T ss_dssp             EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGG-GSSCEEEEETTSCEEEECCSSSCCC---EEEEECCC
T ss_pred             EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCC-CCCEEEEEECCCEEEEEECCCCcce---EEEEccCC
Confidence            489999999999999987753  233 3578899999998631 1478999999999999999875321   23355689


Q ss_pred             CcCcEEEEEEcCCC-CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415          78 KATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT  156 (174)
Q Consensus        78 ~~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~  156 (174)
                      .. .|++++|+|++ +.+||+|+.||+|++||+.                            .+      ...+++..+.
T Consensus       103 ~~-~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~----------------------------~~------~~~~~~~~~~  147 (316)
T 3bg1_A          103 DS-SVNSVCWAPHDYGLILACGSSDGAISLLTYT----------------------------GE------GQWEVKKINN  147 (316)
T ss_dssp             SS-CCCEEEECCTTTCSCEEEECSSSCEEEEEEC----------------------------SS------SCEEECCBTT
T ss_pred             CC-ceEEEEECCCCCCcEEEEEcCCCCEEEEecC----------------------------CC------CCcceeeeec
Confidence            99 99999999963 5789999999999999991                            00      0112356678


Q ss_pred             ccccceeeeeeCCCC
Q psy6415         157 LSSQPINSLDWSADK  171 (174)
Q Consensus       157 ~h~~~V~~l~~spd~  171 (174)
                      +|..+|++++|+|+.
T Consensus       148 ~h~~~v~~~~~~~~~  162 (316)
T 3bg1_A          148 AHTIGCNAVSWAPAV  162 (316)
T ss_dssp             SSSSCBCCCEECCCC
T ss_pred             cccCCcceEEEcccc
Confidence            899999999999984

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.87  E-value=6.6e-21  Score=162.15  Aligned_cols=125  Identities=17%  Similarity=0.302  Sum_probs=105.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +||+|+.|++|++||.....+.....|...|.+++|+|++   +.|++++.|++|++||+...      ....+.+|.. 
T Consensus       399 ~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~---~~l~~~~~d~~v~~w~~~~~------~~~~~~~~~~-  468 (577)
T 2ymu_A          399 TIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDD---QTIASASDDKTVKLWNRNGQ------LLQTLTGHSS-  468 (577)
T ss_dssp             CEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTSC------EEEEEECCSS-
T ss_pred             EEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCC---CEEEEEcCCCEEEEEECCCC------EEEEEcCCCC-
Confidence            4899999999999997544333345678899999999974   89999999999999997542      2345668999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|++++|+| ++.+||+++.|++|++||.                             +|         +++.++.+|..
T Consensus       469 ~v~~~~~sp-d~~~las~~~d~~i~iw~~-----------------------------~~---------~~~~~~~~h~~  509 (577)
T 2ymu_A          469 SVRGVAFSP-DGQTIASASDDKTVKLWNR-----------------------------NG---------QLLQTLTGHSS  509 (577)
T ss_dssp             CEEEEEECT-TSCEEEEEETTSEEEEEET-----------------------------TS---------CEEEEEECCSS
T ss_pred             CEEEEEEcC-CCCEEEEEeCCCEEEEEcC-----------------------------CC---------CEEEEEeCCCC
Confidence            999999999 5679999999999999999                             32         46889999999


Q ss_pred             ceeeeeeCCCCCCC
Q psy6415         161 PINSLDWSADKLGL  174 (174)
Q Consensus       161 ~V~~l~~spd~~~~  174 (174)
                      +|++|+||||++-|
T Consensus       510 ~v~~l~~s~dg~~l  523 (577)
T 2ymu_A          510 SVRGVAFSPDGQTI  523 (577)
T ss_dssp             CEEEEEECTTSSCE
T ss_pred             CEEEEEEcCCCCEE
Confidence            99999999999753

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.87  E-value=7.9e-22  Score=158.09  Aligned_cols=133  Identities=14%  Similarity=0.143  Sum_probs=104.0

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||||+.|++|+|||++++.  .... ..|...|++|+|+|+. .+..|++|+.|++|+|||++.....  .....+.+|
T Consensus        73 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~g~~lasgs~D~~i~lwd~~~~~~~--~~~~~~~~h  149 (316)
T 3bg1_A           73 ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHD-YGLILACGSSDGAISLLTYTGEGQW--EVKKINNAH  149 (316)
T ss_dssp             CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTT-TCSCEEEECSSSCEEEEEECSSSCE--EECCBTTSS
T ss_pred             EEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCC-CCcEEEEEcCCCCEEEEecCCCCCc--ceeeeeccc
Confidence            58999999999999999874  3333 3477889999999962 2478999999999999999875311  012244688


Q ss_pred             CcCcEEEEEEcCCC----------------CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCC
Q psy6415          78 KATTVWAAKHLPQN----------------RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDI  141 (174)
Q Consensus        78 ~~~~i~~v~fsP~~----------------~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~  141 (174)
                      .. .|.+++|+|+.                +.+||+|+.|++|+|||++                            .+ 
T Consensus       150 ~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~----------------------------~~-  199 (316)
T 3bg1_A          150 TI-GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEE----------------------------ED-  199 (316)
T ss_dssp             SS-CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEEC----------------------------TT-
T ss_pred             cC-CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeC----------------------------CC-
Confidence            88 99999999952                3589999999999999991                            00 


Q ss_pred             ccccccccceeeeeeccccceeeeeeCCCC
Q psy6415         142 PMGVPGSLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       142 ~~~~~~~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                           ++.+++.++.+|..+|++++|||++
T Consensus       200 -----~~~~~~~~l~~h~~~V~~v~~sp~~  224 (316)
T 3bg1_A          200 -----GQWKEEQKLEAHSDWVRDVAWAPSI  224 (316)
T ss_dssp             -----SCEEEEECCBCCSSCEEEEECCCCS
T ss_pred             -----CccceeeecccCCCceEEEEecCCC
Confidence                 0123577889999999999999986

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.87  E-value=4.9e-21  Score=152.80  Aligned_cols=61  Identities=13%  Similarity=0.152  Sum_probs=54.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEe--cCCCCCCCEEEEEeCCCcEEEEECCCcc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDF--DRRDIPMNKLVATTLEAKLFVFDLKTLH   64 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f--~~~~~~~~~l~s~s~Dg~I~iWD~~~~~   64 (174)
                      +|++|+.||+|++||++++++.....|...|.+++|  +|+   ++.|++++.|++|++||+++.+
T Consensus       100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~  162 (368)
T 3mmy_A          100 KVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPN---YSCVMTGSWDKTLKFWDTRSSN  162 (368)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSS---CEEEEEEETTSEEEEECSSCSS
T ss_pred             EEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCC---CCEEEEccCCCcEEEEECCCCc
Confidence            489999999999999999998877778899999999  775   3789999999999999998764

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.87  E-value=6.6e-21  Score=156.93  Aligned_cols=128  Identities=16%  Similarity=0.216  Sum_probs=101.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe--------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET--------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE------   66 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~--------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~------   66 (174)
                      +||+|+.||+|++||++++.+....        .|...|.+++|+|++   +.|++|+.|++|+|||+++....      
T Consensus       221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g---~~l~s~s~d~~v~~wd~~~~~~~~~~~~~  297 (393)
T 1erj_A          221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG---QSVVSGSLDRSVKLWNLQNANNKSDSKTP  297 (393)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS---SEEEEEETTSEEEEEEC------------
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC---CEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence            4899999999999999998876543        356789999999974   89999999999999999864321      


Q ss_pred             -cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          67 -KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        67 -~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                       ......++.+|.. .|.+++|+| ++.+|+||+.||+|++||++                            .      
T Consensus       298 ~~~~~~~~~~~h~~-~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~----------------------------~------  341 (393)
T 1erj_A          298 NSGTCEVTYIGHKD-FVLSVATTQ-NDEYILSGSKDRGVLFWDKK----------------------------S------  341 (393)
T ss_dssp             ---CEEEEEECCSS-CEEEEEECG-GGCEEEEEETTSEEEEEETT----------------------------T------
T ss_pred             CCCcceEEEecccC-cEEEEEECC-CCCEEEEEeCCCeEEEEECC----------------------------C------
Confidence             0112335568998 999999999 56789999999999999991                            2      


Q ss_pred             ccccceeeeeeccccceeeeeeCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSAD  170 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd  170 (174)
                         ++.+.++.+|..+|.+++|+|+
T Consensus       342 ---~~~~~~l~~h~~~v~~v~~~~~  363 (393)
T 1erj_A          342 ---GNPLLMLQGHRNSVISVAVANG  363 (393)
T ss_dssp             ---CCEEEEEECCSSCEEEEEECSS
T ss_pred             ---CeEEEEECCCCCCEEEEEecCC
Confidence               2467888999999999999874

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.87  E-value=2.1e-21  Score=157.18  Aligned_cols=146  Identities=10%  Similarity=0.025  Sum_probs=99.3

Q ss_pred             CEEEEecCCcEEEEECCCCC---eE-EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS---LK-WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~---~~-~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +||+|+.||+|++||++++.   .. ....|...|.+++|+|++   +.|++++.|++|++||+++.+...  ....+..
T Consensus        69 ~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~  143 (377)
T 3dwl_C           69 RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE---DKFAVGSGARVISVCYFEQENDWW--VSKHLKR  143 (377)
T ss_dssp             CEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS---SCCEEEESSSCEEECCC-----CC--CCEEECS
T ss_pred             EEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC---CEEEEEecCCeEEEEEECCcccce--eeeEeec
Confidence            58999999999999999876   22 234577889999999974   899999999999999999865211  1233445


Q ss_pred             -cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415          77 -HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA  155 (174)
Q Consensus        77 -h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~  155 (174)
                       |.. .|++++|+| ++.+||+|+.||+|++||+++..-..+            +    .....|..   ...++++.++
T Consensus       144 ~h~~-~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~------------~----~~~~~~~~---~~~~~~~~~~  202 (377)
T 3dwl_C          144 PLRS-TILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAK------------P----EASVWGSR---LPFNTVCAEY  202 (377)
T ss_dssp             SCCS-CEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-C------------C----CSCSSCSC---CCEEEEEECC
T ss_pred             ccCC-CeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCC------------c----cccccccc---cchhhhhhcc
Confidence             888 999999999 567999999999999999921000000            0    00001100   1234678888


Q ss_pred             eccccceeeeeeCCCCCC
Q psy6415         156 TLSSQPINSLDWSADKLG  173 (174)
Q Consensus       156 ~~h~~~V~~l~~spd~~~  173 (174)
                       +|..+|++++||||++-
T Consensus       203 -~~~~~v~~~~~sp~~~~  219 (377)
T 3dwl_C          203 -PSGGWVHAVGFSPSGNA  219 (377)
T ss_dssp             -CCSSSEEEEEECTTSSC
T ss_pred             -cCCceEEEEEECCCCCE
Confidence             99999999999999874

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.86  E-value=1.4e-21  Score=158.09  Aligned_cols=134  Identities=14%  Similarity=0.133  Sum_probs=99.6

Q ss_pred             CEEEEecCCcEEEEECCCCCe---EEEe-e-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc---------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL---KWET-N-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE---------   66 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~---~~~~-~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~---------   66 (174)
                      +|++|+.|++|++||+++++.   .... . |...|++++|+|++   +.|++++.|++|++||++..+..         
T Consensus       114 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  190 (377)
T 3dwl_C          114 KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN---VLLAAGCADRKAYVLSAYVRDVDAKPEASVWG  190 (377)
T ss_dssp             CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS---SEEEEEESSSCEEEEEECCSSCC-CCCSCSSC
T ss_pred             EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC---CEEEEEeCCCEEEEEEEEecccCCCccccccc
Confidence            478999999999999998762   3333 3 77889999999974   89999999999999999643210         


Q ss_pred             ----cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415          67 ----KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP  142 (174)
Q Consensus        67 ----~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~  142 (174)
                          .......+ .|.. .|++++|+| ++.+||+++.||+|++||++                            .+..
T Consensus       191 ~~~~~~~~~~~~-~~~~-~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~----------------------------~~~~  239 (377)
T 3dwl_C          191 SRLPFNTVCAEY-PSGG-WVHAVGFSP-SGNALAYAGHDSSVTIAYPS----------------------------APEQ  239 (377)
T ss_dssp             SCCCEEEEEECC-CCSS-SEEEEEECT-TSSCEEEEETTTEEC-CEEC----------------------------STTS
T ss_pred             cccchhhhhhcc-cCCc-eEEEEEECC-CCCEEEEEeCCCcEEEEECC----------------------------CCCC
Confidence                01123344 8888 999999999 45689999999999999991                            1110


Q ss_pred             cccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         143 MGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       143 ~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                           ..+++.++.+|..+|++++|+||++-
T Consensus       240 -----~~~~~~~~~~~~~~v~~~~~s~~~~~  265 (377)
T 3dwl_C          240 -----PPRALITVKLSQLPLRSLLWANESAI  265 (377)
T ss_dssp             -----CEEECCCEECSSSCEEEEEEEETTEE
T ss_pred             -----cceeeEeecCCCCceEEEEEcCCCCE
Confidence                 01247888999999999999999853

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.86  E-value=8.4e-21  Score=153.18  Aligned_cols=126  Identities=7%  Similarity=0.004  Sum_probs=97.8

Q ss_pred             EEEEecCCcEEEEECC---------CCCeEEEe--ecCCCEEEEEecC--CCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415           2 VVAGYDNGDLKMFDLK---------TMSLKWET--NLKNGVCGVDFDR--RDIPMNKLVATTLEAKLFVFDLKTLHREKG   68 (174)
Q Consensus         2 lasgs~Dg~iklWDl~---------~~~~~~~~--~~~~~V~sv~f~~--~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~   68 (174)
                      |++|+.|++|++|+.+         ++++....  .+...|.+++|+|  ++   +.|++++.|++|+|||+++.++...
T Consensus        88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~  164 (343)
T 3lrv_A           88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT---EYFIWADNRGTIGFQSYEDDSQYIV  164 (343)
T ss_dssp             EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C---CEEEEEETTCCEEEEESSSSCEEEE
T ss_pred             eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC---CEEEEEeCCCcEEEEECCCCcEEEE
Confidence            6899999999999765         44433332  3457799999999  64   8999999999999999998764211


Q ss_pred             eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccc
Q psy6415          69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGS  148 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~  148 (174)
                          ....|.. .|.+++|+| ++.+||+|+.||+|++||++                            .+        
T Consensus       165 ----~~~~~~~-~i~~~~~~p-dg~~lasg~~dg~i~iwd~~----------------------------~~--------  202 (343)
T 3lrv_A          165 ----HSAKSDV-EYSSGVLHK-DSLLLALYSPDGILDVYNLS----------------------------SP--------  202 (343)
T ss_dssp             ----ECCCSSC-CCCEEEECT-TSCEEEEECTTSCEEEEESS----------------------------CT--------
T ss_pred             ----EecCCCC-ceEEEEECC-CCCEEEEEcCCCEEEEEECC----------------------------CC--------
Confidence                1124555 799999999 56799999999999999991                            11        


Q ss_pred             ccee-eeeec-cccceeeeeeCCCCCC
Q psy6415         149 LTLL-QEATL-SSQPINSLDWSADKLG  173 (174)
Q Consensus       149 ~~ll-~~~~~-h~~~V~~l~~spd~~~  173 (174)
                       +.+ .++.+ |..+|++|+||||+.-
T Consensus       203 -~~~~~~~~~~h~~~v~~l~fs~~g~~  228 (343)
T 3lrv_A          203 -DQASSRFPVDEEAKIKEVKFADNGYW  228 (343)
T ss_dssp             -TSCCEECCCCTTSCEEEEEECTTSSE
T ss_pred             -CCCccEEeccCCCCEEEEEEeCCCCE
Confidence             233 66777 9999999999999864

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.86  E-value=4.4e-21  Score=157.07  Aligned_cols=99  Identities=16%  Similarity=0.250  Sum_probs=87.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||.|++||++++++.... .|...|++++|+|++   +.|++|+.|++|+|||+++.+..     ..+.+|..
T Consensus       111 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~d~~i~iwd~~~~~~~-----~~~~~h~~  182 (420)
T 3vl1_A          111 RFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG---EALISSSQDMQLKIWSVKDGSNP-----RTLIGHRA  182 (420)
T ss_dssp             EEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCCC-----EEEECCSS
T ss_pred             EEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCC---CEEEEEeCCCeEEEEeCCCCcCc-----eEEcCCCC
Confidence            4899999999999999988877664 578899999999974   89999999999999999986643     34568999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .|++++|+| ++..|++|+.||+|++||+
T Consensus       183 -~v~~~~~~~-~~~~l~s~~~d~~v~iwd~  210 (420)
T 3vl1_A          183 -TVTDIAIID-RGRNVLSASLDGTIRLWEC  210 (420)
T ss_dssp             -CEEEEEEET-TTTEEEEEETTSCEEEEET
T ss_pred             -cEEEEEEcC-CCCEEEEEcCCCcEEEeEC
Confidence             999999999 5678999999999999999

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.86  E-value=1.4e-21  Score=161.29  Aligned_cols=104  Identities=10%  Similarity=0.166  Sum_probs=85.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE------eecCCCEEEEEecCCC-----CCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE------TNLKNGVCGVDFDRRD-----IPMNKLVATTLEAKLFVFDLKTLHREKGF   69 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~------~~~~~~V~sv~f~~~~-----~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~   69 (174)
                      +||+|+.|++|+|||++++.+...      ..|.+.|++|+|+|..     .++++|||||.|++|||||+++..+.   
T Consensus       103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~---  179 (393)
T 4gq1_A          103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI---  179 (393)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE---
T ss_pred             EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee---
Confidence            489999999999999998876432      2467889999998721     02478999999999999999875432   


Q ss_pred             eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                        ..+..|.. +|.+|+|+|+++.+|++|+.||+|++||+.
T Consensus       180 --~~~~~~~~-~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~  217 (393)
T 4gq1_A          180 --LAGYPLSS-PGISVQFRPSNPNQLIVGERNGNIRIFDWT  217 (393)
T ss_dssp             --EEEEECSS-CEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred             --eeecCCCC-CcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence              23447888 999999999777789999999999999993

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.86  E-value=6e-21  Score=154.04  Aligned_cols=99  Identities=11%  Similarity=0.035  Sum_probs=82.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc-c
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA-H   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~-h   77 (174)
                      +|++|+.||+|++||++++++....  .+...|++++|+|++   ..|++|+.|++|+|||+++.+..    ...+.. |
T Consensus       141 ~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg---~~lasg~~dg~i~iwd~~~~~~~----~~~~~~~h  213 (343)
T 3lrv_A          141 YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS---LLLALYSPDGILDVYNLSSPDQA----SSRFPVDE  213 (343)
T ss_dssp             EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS---CEEEEECTTSCEEEEESSCTTSC----CEECCCCT
T ss_pred             EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC---CEEEEEcCCCEEEEEECCCCCCC----ccEEeccC
Confidence            3789999999999999999886543  244579999999974   89999999999999999987643    123445 8


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .. +|++++|+| ++.+||+++ |++|++||+
T Consensus       214 ~~-~v~~l~fs~-~g~~l~s~~-~~~v~iwd~  242 (343)
T 3lrv_A          214 EA-KIKEVKFAD-NGYWMVVEC-DQTVVCFDL  242 (343)
T ss_dssp             TS-CEEEEEECT-TSSEEEEEE-SSBEEEEET
T ss_pred             CC-CEEEEEEeC-CCCEEEEEe-CCeEEEEEc
Confidence            88 999999999 567899999 569999999

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.85  E-value=3.6e-21  Score=174.88  Aligned_cols=133  Identities=15%  Similarity=0.201  Sum_probs=101.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeE----EEe--------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc-
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK----WET--------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK-   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~----~~~--------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~-   67 (174)
                      +||||+.||+||+||+.++.+.    ...        .|...|.+|+|+|++   ..||+|+.||+|+|||+.+.+... 
T Consensus       449 ~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg---~~LAsgs~DgtV~lwd~~~~~~~~~  525 (902)
T 2oaj_A          449 AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET---LELAVSIETGDVVLFKYEVNQFYSV  525 (902)
T ss_dssp             EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT---TEEEEEETTSCEEEEEEEECCC---
T ss_pred             EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC---CeEEEEecCcEEEEEEecCccccCc
Confidence            4899999999999999887532    111        456789999999974   899999999999999998652100 


Q ss_pred             --------------------------------------c-eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          68 --------------------------------------G-FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        68 --------------------------------------~-~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                                                            + ..+.++.+|.+ +|++|+||| ++ +||+|+.||+|+|||
T Consensus       526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~-~V~svafSp-dG-~lAsgs~D~tv~lwd  602 (902)
T 2oaj_A          526 ENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG-KTSAINNSN-IG-FVGIAYAAGSLMLID  602 (902)
T ss_dssp             ------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC-SEEEEEECB-TS-EEEEEETTSEEEEEE
T ss_pred             cccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC-cEEEEEecC-Cc-EEEEEeCCCcEEEEE
Confidence                                                  0 11345678999 999999999 55 999999999999999


Q ss_pred             ccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee-ccccceeeeeeC-----CCC
Q psy6415         109 LVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT-LSSQPINSLDWS-----ADK  171 (174)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~-~h~~~V~~l~~s-----pd~  171 (174)
                      +                             ++..+  ..+.+ +..+. +|+..|++|+||     |||
T Consensus       603 ~-----------------------------~~~~~--~~~~~-~~~~~~gh~~~V~sv~Fs~~~~~~Dg  639 (902)
T 2oaj_A          603 R-----------------------------RGPAI--IYMEN-IREISGAQSACVTCIEFVIMEYGDDG  639 (902)
T ss_dssp             T-----------------------------TTTEE--EEEEE-GGGTCSSCCCCEEEEEEEEEECTTSS
T ss_pred             C-----------------------------CCCeE--EEEee-hhHhccccccceEEEEEEEEecCCCC
Confidence            9                             21110  00011 24565 999999999999     986

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.85  E-value=1.1e-20  Score=154.00  Aligned_cols=128  Identities=12%  Similarity=0.224  Sum_probs=106.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec-------CCCEEEEEecCCCCCCCEEEEEeCCC---cEEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL-------KNGVCGVDFDRRDIPMNKLVATTLEA---KLFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~-------~~~V~sv~f~~~~~~~~~l~s~s~Dg---~I~iWD~~~~~~~~~~~   70 (174)
                      +|++|+.||.|++||+++++.......       ...|.+++|+|++  ...|++++.|+   .|++||+++...    .
T Consensus       180 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~~~~i~~~d~~~~~~----~  253 (416)
T 2pm9_A          180 VFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN--STRVATATGSDNDPSILIWDLRNANT----P  253 (416)
T ss_dssp             EEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC--TTEEEEEECCSSSCCCCEEETTSTTS----C
T ss_pred             EEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC--CCEEEEEECCCCCceEEEEeCCCCCC----C
Confidence            378999999999999999887766543       5679999999974  36899999999   999999998531    1


Q ss_pred             eeeec-ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccc
Q psy6415          71 YLSEK-AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSL  149 (174)
Q Consensus        71 ~~~~~-~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~  149 (174)
                      ...+. +|.. .|++++|+|.++.+|++++.||+|++||++                            .         +
T Consensus       254 ~~~~~~~~~~-~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~----------------------------~---------~  295 (416)
T 2pm9_A          254 LQTLNQGHQK-GILSLDWCHQDEHLLLSSGRDNTVLLWNPE----------------------------S---------A  295 (416)
T ss_dssp             SBCCCSCCSS-CEEEEEECSSCSSCEEEEESSSEEEEECSS----------------------------S---------C
T ss_pred             cEEeecCccC-ceeEEEeCCCCCCeEEEEeCCCCEEEeeCC----------------------------C---------C
Confidence            23445 7888 999999999667799999999999999991                            1         2


Q ss_pred             ceeeeeeccccceeeeeeCCCCC
Q psy6415         150 TLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       150 ~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      +.+.++.+|..+|++++|+||++
T Consensus       296 ~~~~~~~~~~~~v~~~~~s~~~~  318 (416)
T 2pm9_A          296 EQLSQFPARGNWCFKTKFAPEAP  318 (416)
T ss_dssp             CEEEEEECSSSCCCCEEECTTCT
T ss_pred             ccceeecCCCCceEEEEECCCCC
Confidence            46888899999999999999983

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.85  E-value=1.8e-20  Score=152.32  Aligned_cols=127  Identities=14%  Similarity=0.211  Sum_probs=103.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||+|+.||+|+|||+++++.....   .|...|.+++|+|++  ++.|++++.|++|++||+++.. ...  ......|
T Consensus        88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~-~~~--~~~~~~~  162 (383)
T 3ei3_B           88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN--TNQLFVSSIRGATTLRDFSGSV-IQV--FAKTDSW  162 (383)
T ss_dssp             EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE--EEEEEEEETTTEEEEEETTSCE-EEE--EECCCCS
T ss_pred             EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC--CCEEEEEeCCCEEEEEECCCCc-eEE--EeccCCC
Confidence            4899999999999999988776554   377889999999942  3789999999999999999632 111  1122344


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|++++|+| ++.+||+|+.||+|++||+                             ++         +.+.++.+
T Consensus       163 ~~-~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-----------------------------~~---------~~~~~~~~  202 (383)
T 3ei3_B          163 DY-WYCCVDVSV-SRQMLATGDSTGRLLLLGL-----------------------------DG---------HEIFKEKL  202 (383)
T ss_dssp             SC-CEEEEEEET-TTTEEEEEETTSEEEEEET-----------------------------TS---------CEEEEEEC
T ss_pred             CC-CeEEEEECC-CCCEEEEECCCCCEEEEEC-----------------------------CC---------CEEEEecc
Confidence            56 899999999 5679999999999999999                             22         35788889


Q ss_pred             cccceeeeeeCCCCC
Q psy6415         158 SSQPINSLDWSADKL  172 (174)
Q Consensus       158 h~~~V~~l~~spd~~  172 (174)
                      |..+|++++|+|+++
T Consensus       203 h~~~v~~~~~~~~~~  217 (383)
T 3ei3_B          203 HKAKVTHAEFNPRCD  217 (383)
T ss_dssp             SSSCEEEEEECSSCT
T ss_pred             CCCcEEEEEECCCCC
Confidence            999999999999986

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.85  E-value=7.9e-21  Score=156.01  Aligned_cols=132  Identities=12%  Similarity=0.195  Sum_probs=103.4

Q ss_pred             EEEEecCCcEEEEECCCCCe----E-EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc--eeeeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSL----K-WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG--FAYLSE   74 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~----~-~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~--~~~~~~   74 (174)
                      +++|+.||.|+|||++....    . ....|...|++++|+|++  ++.|++|+.|++|+|||+++......  .....+
T Consensus        50 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~  127 (402)
T 2aq5_A           50 ICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHN--DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL  127 (402)
T ss_dssp             EBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTC--TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE
T ss_pred             EEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCC--CCEEEEEeCCCeEEEEEccCCCCccccCCceEEe
Confidence            45688999999999965421    1 123477889999999932  48999999999999999998632110  123456


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                      .+|.. .|++++|+|+++.+|++|+.||+|++||++                            .         ++.+.+
T Consensus       128 ~~h~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~----------------------------~---------~~~~~~  169 (402)
T 2aq5_A          128 EGHTK-RVGIVAWHPTAQNVLLSAGCDNVILVWDVG----------------------------T---------GAAVLT  169 (402)
T ss_dssp             ECCSS-CEEEEEECSSBTTEEEEEETTSCEEEEETT----------------------------T---------TEEEEE
T ss_pred             cCCCC-eEEEEEECcCCCCEEEEEcCCCEEEEEECC----------------------------C---------CCccEE
Confidence            68999 999999999766799999999999999991                            1         245677


Q ss_pred             e--eccccceeeeeeCCCCCC
Q psy6415         155 A--TLSSQPINSLDWSADKLG  173 (174)
Q Consensus       155 ~--~~h~~~V~~l~~spd~~~  173 (174)
                      +  .+|..+|.+++|+||+.-
T Consensus       170 ~~~~~~~~~v~~~~~~~~~~~  190 (402)
T 2aq5_A          170 LGPDVHPDTIYSVDWSRDGAL  190 (402)
T ss_dssp             ECTTTCCSCEEEEEECTTSSC
T ss_pred             EecCCCCCceEEEEECCCCCE
Confidence            7  789999999999999864

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.85  E-value=5e-20  Score=144.95  Aligned_cols=109  Identities=13%  Similarity=0.213  Sum_probs=85.5

Q ss_pred             CEEEEecCCcEEEEECCCCC----eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc----ceee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS----LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK----GFAY   71 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~----~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~----~~~~   71 (174)
                      +||+|+.||+|++||++++.    +... ..|...|.+++|+|.. +++.|++++.|++|+|||+++.+...    ....
T Consensus        25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~  103 (351)
T 3f3f_A           25 HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPE-YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKL  103 (351)
T ss_dssp             EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGG-GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEE
T ss_pred             EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCC-CCCEEEEEcCCCeEEEEecCCCcccccccCccee
Confidence            48999999999999998764    2222 3477889999999830 13899999999999999998753210    0123


Q ss_pred             eeecccCcCcEEEEEEcCCC-CCEEEEEcCCCcEEEEeccc
Q psy6415          72 LSEKAHKATTVWAAKHLPQN-RDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~-~~~las~s~Dg~V~lWd~~~  111 (174)
                      ..+..|.. .|++++|+|+. +.+|++++.||+|++||+.+
T Consensus       104 ~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~  143 (351)
T 3f3f_A          104 CTLNDSKG-SLYSVKFAPAHLGLKLACLGNDGILRLYDALE  143 (351)
T ss_dssp             EEECCCSS-CEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred             eeecccCC-ceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence            45668888 99999999952 67899999999999999943

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.85  E-value=4e-20  Score=150.29  Aligned_cols=129  Identities=19%  Similarity=0.256  Sum_probs=101.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec---CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL---KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~---~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|++|+.||+|++||+++........+   ...|.+++|+|++   +.|++|+.|+.|++||++..      ....+.+|
T Consensus       133 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~------~~~~~~~h  203 (383)
T 3ei3_B          133 QLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSR---QMLATGDSTGRLLLLGLDGH------EIFKEKLH  203 (383)
T ss_dssp             EEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTT---TEEEEEETTSEEEEEETTSC------EEEEEECS
T ss_pred             EEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCC---CEEEEECCCCCEEEEECCCC------EEEEeccC
Confidence            479999999999999997544433332   3679999999974   89999999999999999542      23455689


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|.+++|+|++..+|++|+.||+|++||+.+    .                      .       ...+++..+ +
T Consensus       204 ~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~----------------------~-------~~~~~~~~~-~  248 (383)
T 3ei3_B          204 KA-KVTHAEFNPRCDWLMATSSVDATVKLWDLRN----I----------------------K-------DKNSYIAEM-P  248 (383)
T ss_dssp             SS-CEEEEEECSSCTTEEEEEETTSEEEEEEGGG----C----------------------C-------STTCEEEEE-E
T ss_pred             CC-cEEEEEECCCCCCEEEEEeCCCEEEEEeCCC----C----------------------C-------cccceEEEe-c
Confidence            98 9999999996555999999999999999911    0                      0       012345555 7


Q ss_pred             cccceeeeeeCC-CCCC
Q psy6415         158 SSQPINSLDWSA-DKLG  173 (174)
Q Consensus       158 h~~~V~~l~~sp-d~~~  173 (174)
                      |..+|.+++|+| |++-
T Consensus       249 ~~~~v~~~~~s~~~~~~  265 (383)
T 3ei3_B          249 HEKPVNAAYFNPTDSTK  265 (383)
T ss_dssp             CSSCEEEEEECTTTSCE
T ss_pred             CCCceEEEEEcCCCCCE
Confidence            999999999999 8753

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.85  E-value=1.5e-20  Score=149.15  Aligned_cols=132  Identities=16%  Similarity=0.179  Sum_probs=96.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++|+.|++|++||++++++.... .|...|++|+|+|++   ++|++|+.|++|+|||+++.++..     .+ .+.. 
T Consensus       188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s~Dg~i~iwd~~~~~~~~-----~~-~~~~-  257 (340)
T 4aow_A          188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG---SLCASGGKDGQAMLWDLNEGKHLY-----TL-DGGD-  257 (340)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTCEEEEEETTTTEEEE-----EE-ECSS-
T ss_pred             EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCC---CEEEEEeCCCeEEEEEeccCceee-----ee-cCCc-
Confidence            689999999999999999877654 467889999999974   899999999999999999865432     33 3445 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.++.|+| ++. +++++.|++|++||+++...                            +.............+|..
T Consensus       258 ~v~~~~~~~-~~~-~~~~~~d~~i~iwd~~~~~~----------------------------~~~~~~~~~~~~~~~h~~  307 (340)
T 4aow_A          258 IINALCFSP-NRY-WLCAATGPSIKIWDLEGKII----------------------------VDELKQEVISTSSKAEPP  307 (340)
T ss_dssp             CEEEEEECS-SSS-EEEEEETTEEEEEETTTTEE----------------------------EEEECCC-------CCCC
T ss_pred             eEEeeecCC-CCc-eeeccCCCEEEEEECCCCeE----------------------------EEeccccceeeeccCCCC
Confidence            799999999 454 46677899999999921000                            000000123445678999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|++|+||||++-
T Consensus       308 ~v~~l~~s~dg~~  320 (340)
T 4aow_A          308 QCTSLAWSADGQT  320 (340)
T ss_dssp             CEEEEEECTTSSE
T ss_pred             CEEEEEECCCCCE
Confidence            9999999999864

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.85  E-value=2.7e-20  Score=149.23  Aligned_cols=132  Identities=17%  Similarity=0.210  Sum_probs=105.7

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|++|+.||+|++||+++++  .... ..|...|.+++|+|+. .++.|++++.|++|++||+++.....   ...+..|
T Consensus        71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~---~~~~~~~  146 (379)
T 3jrp_A           71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHE-YGPLLLVASSDGKVSVVEFKENGTTS---PIIIDAH  146 (379)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEECCTTSCCC---EEEEECC
T ss_pred             EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCC-CCCEEEEecCCCcEEEEecCCCCcee---eEEecCC
Confidence            48999999999999999886  3333 3467889999999961 13899999999999999999864322   2344688


Q ss_pred             CcCcEEEEEEcCC------------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          78 KATTVWAAKHLPQ------------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        78 ~~~~i~~v~fsP~------------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                      .. .|.+++|+|.            ++.+|++|+.||+|++||+.                            .+.    
T Consensus       147 ~~-~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~----------------------------~~~----  193 (379)
T 3jrp_A          147 AI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN----------------------------SDA----  193 (379)
T ss_dssp             TT-CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE----------------------------TTT----
T ss_pred             CC-ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec----------------------------CCC----
Confidence            88 9999999995            46799999999999999991                            110    


Q ss_pred             ccccceeeeeeccccceeeeeeCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSAD  170 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd  170 (174)
                       ....++..+.+|..+|++++|+|+
T Consensus       194 -~~~~~~~~~~~h~~~v~~~~~sp~  217 (379)
T 3jrp_A          194 -QTYVLESTLEGHSDWVRDVAWSPT  217 (379)
T ss_dssp             -TEEEEEEEECCCSSCEEEEEECCC
T ss_pred             -cceeeEEEEecccCcEeEEEECCC
Confidence             112467888999999999999999

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.85  E-value=2.3e-20  Score=153.22  Aligned_cols=126  Identities=12%  Similarity=0.136  Sum_probs=100.9

Q ss_pred             CEEEEecCCcEEEEECCCC-------CeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTM-------SLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~-------~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      +||+|+.||+|+|||++++       ..... ..|...|.+++|+|++  .+.|++++.|++|+|||+++.++.     .
T Consensus        96 ~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~-----~  168 (402)
T 2aq5_A           96 VIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA--QNVLLSAGCDNVILVWDVGTGAAV-----L  168 (402)
T ss_dssp             EEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB--TTEEEEEETTSCEEEEETTTTEEE-----E
T ss_pred             EEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC--CCEEEEEcCCCEEEEEECCCCCcc-----E
Confidence            4899999999999999887       33333 4577889999999974  368999999999999999986543     3


Q ss_pred             ee--cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccc
Q psy6415          73 SE--KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT  150 (174)
Q Consensus        73 ~~--~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~  150 (174)
                      .+  ..|.. .|.+++|+| ++.+|++++.||+|++||++                            .         ++
T Consensus       169 ~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~----------------------------~---------~~  209 (402)
T 2aq5_A          169 TLGPDVHPD-TIYSVDWSR-DGALICTSCRDKRVRVIEPR----------------------------K---------GT  209 (402)
T ss_dssp             EECTTTCCS-CEEEEEECT-TSSCEEEEETTSEEEEEETT----------------------------T---------TE
T ss_pred             EEecCCCCC-ceEEEEECC-CCCEEEEEecCCcEEEEeCC----------------------------C---------Cc
Confidence            44  57888 999999999 56789999999999999991                            1         23


Q ss_pred             eeeee-eccccc-eeeeeeCCCCC
Q psy6415         151 LLQEA-TLSSQP-INSLDWSADKL  172 (174)
Q Consensus       151 ll~~~-~~h~~~-V~~l~~spd~~  172 (174)
                      .+.++ .+|... +.++.|+||++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~  233 (402)
T 2aq5_A          210 VVAEKDRPHEGTRPVHAVFVSEGK  233 (402)
T ss_dssp             EEEEEECSSCSSSCCEEEECSTTE
T ss_pred             eeeeeccCCCCCcceEEEEcCCCc
Confidence            45566 677765 78888888864

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.84  E-value=5.5e-20  Score=153.07  Aligned_cols=132  Identities=17%  Similarity=0.223  Sum_probs=105.5

Q ss_pred             CEEEEecCCcEEEEECCCCCe-------EE-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-------KW-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-------~~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      +|++|+.||+|++||++++..       .. ...|...|.+++|+|.+  ++.|++++.|+.|++||+++....  ....
T Consensus       196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~~l~s~~~dg~i~i~d~~~~~~~--~~~~  271 (430)
T 2xyi_A          196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH--ESLFGSVADDQKLMIWDTRNNNTS--KPSH  271 (430)
T ss_dssp             EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC--TTEEEEEETTSEEEEEETTCSCSS--SCSE
T ss_pred             eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC--CCEEEEEeCCCeEEEEECCCCCCC--ccee
Confidence            489999999999999987432       11 23467789999999953  488999999999999999976311  1233


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccccee
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLL  152 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll  152 (174)
                      .+.+|.. .|++++|+|++..+||+|+.||+|++||+    |                        .        ..+.+
T Consensus       272 ~~~~~~~-~v~~i~~~p~~~~~l~tg~~dg~v~vwd~----~------------------------~--------~~~~~  314 (430)
T 2xyi_A          272 TVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDL----R------------------------N--------LKLKL  314 (430)
T ss_dssp             EEECCSS-CEEEEEECSSCTTEEEEEETTSEEEEEET----T------------------------C--------TTSCS
T ss_pred             EeecCCC-CeEEEEeCCCCCCEEEEEeCCCeEEEEeC----C------------------------C--------CCCCe
Confidence            4568888 99999999987779999999999999999    1                        1        01357


Q ss_pred             eeeeccccceeeeeeCCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~~  173 (174)
                      .++.+|..+|.+++|+|+++.
T Consensus       315 ~~~~~h~~~v~~i~~sp~~~~  335 (430)
T 2xyi_A          315 HSFESHKDEIFQVQWSPHNET  335 (430)
T ss_dssp             EEEECCSSCEEEEEECSSCTT
T ss_pred             EEeecCCCCEEEEEECCCCCC
Confidence            888899999999999999864

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.84  E-value=7.3e-20  Score=146.76  Aligned_cols=139  Identities=11%  Similarity=0.117  Sum_probs=104.7

Q ss_pred             CEEEEecCCcEEEEECCCCCe---EEEeecCCCEEEEEecCCCC----------CCCEEEEEeCCCcEEEEECCCccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL---KWETNLKNGVCGVDFDRRDI----------PMNKLVATTLEAKLFVFDLKTLHREK   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~---~~~~~~~~~V~sv~f~~~~~----------~~~~l~s~s~Dg~I~iWD~~~~~~~~   67 (174)
                      +|++|+.||+|++||++++..   .....+...|++++|+|...          +++.|++++.|+.|+|||+++.....
T Consensus       117 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  196 (379)
T 3jrp_A          117 LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY  196 (379)
T ss_dssp             EEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEE
T ss_pred             EEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcce
Confidence            389999999999999988743   22345678899999999300          14899999999999999998764321


Q ss_pred             ceeeeeecccCcCcEEEEEEcCCC--CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          68 GFAYLSEKAHKATTVWAAKHLPQN--RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        68 ~~~~~~~~~h~~~~i~~v~fsP~~--~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                       .....+.+|.. .|.+++|+|++  +.+||+++.||+|++||+.+                            +..   
T Consensus       197 -~~~~~~~~h~~-~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~----------------------------~~~---  243 (379)
T 3jrp_A          197 -VLESTLEGHSD-WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN----------------------------EQG---  243 (379)
T ss_dssp             -EEEEEECCCSS-CEEEEEECCCCSSSEEEEEEETTSCEEEEEESS----------------------------TTS---
T ss_pred             -eeEEEEecccC-cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC----------------------------CCc---
Confidence             12345678998 99999999953  67999999999999999911                            000   


Q ss_pred             ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                       .....+.....|..+|.+++|+||++-
T Consensus       244 -~~~~~~~~~~~~~~~v~~~~~s~~g~~  270 (379)
T 3jrp_A          244 -PWKKTLLKEEKFPDVLWRASWSLSGNV  270 (379)
T ss_dssp             -CCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred             -cceeeeeccccCCCcEEEEEEcCCCCE
Confidence             001234444568899999999999874

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.84  E-value=6.8e-20  Score=149.28  Aligned_cols=133  Identities=16%  Similarity=0.170  Sum_probs=99.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCC--------------CC------------------CEEEE-
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDI--------------PM------------------NKLVA-   48 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~--------------~~------------------~~l~s-   48 (174)
                      +++|+.|++|+|||+++++++....+...|.+++|+++..              .+                  +.++. 
T Consensus        74 ~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~  153 (355)
T 3vu4_A           74 AFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYS  153 (355)
T ss_dssp             EEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEE
T ss_pred             EEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEe
Confidence            3578889999999999999887777788899999987410              01                  23443 


Q ss_pred             -EeCCCcEEEEECCCccccc----c------ee-eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-EEEEeccccccc
Q psy6415          49 -TTLEAKLFVFDLKTLHREK----G------FA-YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS-LNLWQLVSALRA  115 (174)
Q Consensus        49 -~s~Dg~I~iWD~~~~~~~~----~------~~-~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~-V~lWd~~~~~~~  115 (174)
                       |+.||+|+|||+++.....    .      .+ ...+.+|.. +|++++|+| ++.+||||+.||+ |+|||++     
T Consensus       154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~-~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~-----  226 (355)
T 3vu4_A          154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN-PIKMVRLNR-KSDMVATCSQDGTIIRVFKTE-----  226 (355)
T ss_dssp             ESSCTTCEEEEECCC------------------CCEEECCCSS-CEEEEEECT-TSSEEEEEETTCSEEEEEETT-----
T ss_pred             CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC-ceEEEEECC-CCCEEEEEeCCCCEEEEEECC-----
Confidence             4677888888887643100    0      01 345679999 999999999 5679999999999 9999991     


Q ss_pred             cccccceeeeecCCCCCCcccCCCCCccccccccceeeeee-c-cccceeeeeeCCCCCC
Q psy6415         116 DTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT-L-SSQPINSLDWSADKLG  173 (174)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~-~-h~~~V~~l~~spd~~~  173 (174)
                                             +         ++++.++. + |..+|++++||||++-
T Consensus       227 -----------------------~---------~~~~~~~~~g~h~~~v~~~~~s~~~~~  254 (355)
T 3vu4_A          227 -----------------------D---------GVLVREFRRGLDRADVVDMKWSTDGSK  254 (355)
T ss_dssp             -----------------------T---------CCEEEEEECTTCCSCEEEEEECTTSCE
T ss_pred             -----------------------C---------CcEEEEEEcCCCCCcEEEEEECCCCCE
Confidence                                   2         34678887 6 9999999999999864

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.84  E-value=5.9e-20  Score=149.09  Aligned_cols=99  Identities=17%  Similarity=0.350  Sum_probs=85.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee----c---CCCEEEEEecCCCCCCCEEEEEeCC---CcEEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN----L---KNGVCGVDFDRRDIPMNKLVATTLE---AKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~----~---~~~V~sv~f~~~~~~~~~l~s~s~D---g~I~iWD~~~~~~~~~~~   70 (174)
                      +|++|+.||.|++||+++++......    |   ...|.+++|+|++   +.|++++.|   +.|++||+++.++.    
T Consensus       199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~---~~l~~~~~d~~~g~i~i~d~~~~~~~----  271 (397)
T 1sq9_A          199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG---SLLAIAHDSNSFGCITLYETEFGERI----  271 (397)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST---TEEEEEEEETTEEEEEEEETTTCCEE----
T ss_pred             eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC---CEEEEEecCCCCceEEEEECCCCccc----
Confidence            47899999999999999988776654    4   7889999999974   899999999   99999999986543    


Q ss_pred             eeeecc-------------cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          71 YLSEKA-------------HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        71 ~~~~~~-------------h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       ..+..             |.. .|.+++|+| ++.+||+++.||+|++||+
T Consensus       272 -~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~dg~i~iwd~  320 (397)
T 1sq9_A          272 -GSLSVPTHSSQASLGEFAHSS-WVMSLSFND-SGETLCSAGWDGKLRFWDV  320 (397)
T ss_dssp             -EEECBC--------CCBSBSS-CEEEEEECS-SSSEEEEEETTSEEEEEET
T ss_pred             -ceeccCcccccccccccccCC-cEEEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence             33445             888 999999999 5679999999999999999

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.84  E-value=3.9e-20  Score=147.66  Aligned_cols=128  Identities=12%  Similarity=0.125  Sum_probs=101.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee------cCCCEEEEEecCCCCC-CCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN------LKNGVCGVDFDRRDIP-MNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~------~~~~V~sv~f~~~~~~-~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +++++.++.|++||+++++......      +...|++++|+|+... ++.|++|+.|++|+|||+++.+.     ...+
T Consensus        37 ~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-----~~~~  111 (366)
T 3k26_A           37 VFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC-----IKHY  111 (366)
T ss_dssp             EEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE-----EEEE
T ss_pred             EEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE-----eeee
Confidence            5667777899999999776543322      4577999999997321 35899999999999999998654     3345


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                      .+|.. .|.+++|+|.++.+||+|+.||+|++||++                            .         ++.+..
T Consensus       112 ~~~~~-~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~----------------------------~---------~~~~~~  153 (366)
T 3k26_A          112 VGHGN-AINELKFHPRDPNLLLSVSKDHALRLWNIQ----------------------------T---------DTLVAI  153 (366)
T ss_dssp             ESCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETT----------------------------T---------TEEEEE
T ss_pred             cCCCC-cEEEEEECCCCCCEEEEEeCCCeEEEEEee----------------------------c---------CeEEEE
Confidence            68998 999999999667899999999999999991                            1         123444


Q ss_pred             e---eccccceeeeeeCCCCC
Q psy6415         155 A---TLSSQPINSLDWSADKL  172 (174)
Q Consensus       155 ~---~~h~~~V~~l~~spd~~  172 (174)
                      +   .+|..+|.+++|+|+++
T Consensus       154 ~~~~~~~~~~v~~~~~~~~~~  174 (366)
T 3k26_A          154 FGGVEGHRDEVLSADYDLLGE  174 (366)
T ss_dssp             ECSTTSCSSCEEEEEECTTSS
T ss_pred             ecccccccCceeEEEECCCCC
Confidence            4   78999999999999975

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.84  E-value=1.9e-20  Score=170.18  Aligned_cols=103  Identities=11%  Similarity=0.134  Sum_probs=88.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee-------ee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY-------LS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~-------~~   73 (174)
                      +||+|+.|++|+|||++++++.....+...|++++|+|++   ++|++|+.||+|++||+++.... .+..       ..
T Consensus        71 ~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g---~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~  146 (902)
T 2oaj_A           71 YLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASL---DWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFF  146 (902)
T ss_dssp             EEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTC---SEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTC
T ss_pred             EEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCC---CEEEEEcCCCcEEEEECCCCccc-cceeccccccccc
Confidence            3899999999999999999988777777889999999974   89999999999999999986532 1111       23


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+|.. +|++++|+|++..+|++|+.||+| |||+
T Consensus       147 ~~~h~~-~V~sl~~sp~~~~~l~~g~~dg~v-lWd~  180 (902)
T 2oaj_A          147 PAARLS-PIVSIQWNPRDIGTVLISYEYVTL-TYSL  180 (902)
T ss_dssp             SSSCCC-CCCEEEEETTEEEEEEEECSSCEE-EEET
T ss_pred             cccCCC-CeEEEEEccCCCCEEEEEeCCCcE-EEEC
Confidence            467888 999999999766789999999999 9999

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.84  E-value=1.2e-19  Score=149.18  Aligned_cols=125  Identities=11%  Similarity=0.216  Sum_probs=105.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||.|++||+++++..... .|...|.+++|++     +.|++++.|+.|++||++....    ....+.+|..
T Consensus       148 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~  218 (401)
T 4aez_A          148 FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR-----HVLSSGSRSGAIHHHDVRIANH----QIGTLQGHSS  218 (401)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET-----TEEEEEETTSEEEEEETTSSSC----EEEEEECCSS
T ss_pred             EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC-----CEEEEEcCCCCEEEEecccCcc----eeeEEcCCCC
Confidence            4799999999999999998877665 4678899999975     7899999999999999995331    2345568999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.+++|+| ++.+||+|+.||+|++||+.                            .         .+.+.++.+|.
T Consensus       219 -~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~----------------------------~---------~~~~~~~~~~~  259 (401)
T 4aez_A          219 -EVCGLAWRS-DGLQLASGGNDNVVQIWDAR----------------------------S---------SIPKFTKTNHN  259 (401)
T ss_dssp             -CEEEEEECT-TSSEEEEEETTSCEEEEETT----------------------------C---------SSEEEEECCCS
T ss_pred             -CeeEEEEcC-CCCEEEEEeCCCeEEEccCC----------------------------C---------CCccEEecCCc
Confidence             999999999 56799999999999999991                            1         23577888999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|.+++|+|++..
T Consensus       260 ~~v~~~~~~p~~~~  273 (401)
T 4aez_A          260 AAVKAVAWCPWQSN  273 (401)
T ss_dssp             SCCCEEEECTTSTT
T ss_pred             ceEEEEEECCCCCC
Confidence            99999999998764

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.84  E-value=9.7e-20  Score=149.81  Aligned_cols=163  Identities=17%  Similarity=0.214  Sum_probs=112.6

Q ss_pred             CEEEEecCCcEEEEECCC-CCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKT-MSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~-~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|++|+.||.|++||++. +..... ..|...|++++|+|++   +.|++|+.|+.|++||+++.++     ...+..|.
T Consensus       188 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~~~~-----~~~~~~~~  259 (401)
T 4aez_A          188 VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDG---LQLASGGNDNVVQIWDARSSIP-----KFTKTNHN  259 (401)
T ss_dssp             EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTCSSE-----EEEECCCS
T ss_pred             EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCC---CEEEEEeCCCeEEEccCCCCCc-----cEEecCCc
Confidence            478999999999999984 443333 4577889999999964   8999999999999999998653     33456788


Q ss_pred             cCcEEEEEEcCCCCCEEEEEc--CCCcEEEEeccccccccccccceeeeecCC-CCCCcccC----CCCCcccc--ccc-
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCG--GSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKPD----IDDIPMGV--PGS-  148 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s--~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~dg~~~~~--~~~-  148 (174)
                      . .|.+++|+|++..++++|+  .||.|++||+.+......-..........+ |++..++.    .||. +.+  ... 
T Consensus       260 ~-~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~  337 (401)
T 4aez_A          260 A-AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSS  337 (401)
T ss_dssp             S-CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETT
T ss_pred             c-eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCc
Confidence            8 9999999998888999976  799999999944111000000001112222 33332221    2331 111  122 


Q ss_pred             -cceeeeeeccccceeeeeeCCCCCC
Q psy6415         149 -LTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       149 -~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                       ...+..+.+|..+|.+++||||++-
T Consensus       338 ~~~~~~~~~~h~~~v~~~~~s~dg~~  363 (401)
T 4aez_A          338 GLTKQVDIPAHDTRVLYSALSPDGRI  363 (401)
T ss_dssp             EEEEEEEEECCSSCCCEEEECTTSSE
T ss_pred             cceeEEEecCCCCCEEEEEECCCCCE
Confidence             2345567899999999999999863

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.84  E-value=1.8e-20  Score=154.85  Aligned_cols=100  Identities=16%  Similarity=0.180  Sum_probs=84.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-c
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-A   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~   76 (174)
                      +|++|+.||+|++||++++++.....   |...|++++|+|++   +.|++|+.||+|+|||+++.++..     ++. .
T Consensus       184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~  255 (437)
T 3gre_A          184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC---CVLILGTTRGIIDIWDIRFNVLIR-----SWSFG  255 (437)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS---CEEEEEETTSCEEEEETTTTEEEE-----EEBCT
T ss_pred             EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC---CEEEEEcCCCeEEEEEcCCccEEE-----EEecC
Confidence            47999999999999999998876654   56889999999974   899999999999999999865432     332 6


Q ss_pred             cCcCcEEEEEEcCC---CCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQ---NRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~---~~~~las~s~Dg~V~lWd~  109 (174)
                      |.. .|.+++|+|.   ++.+||+|+.||+|++||+
T Consensus       256 ~~~-~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~  290 (437)
T 3gre_A          256 DHA-PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF  290 (437)
T ss_dssp             TCE-EEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred             CCC-ceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence            777 8999977662   4569999999999999999

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.84  E-value=9.9e-20  Score=151.45  Aligned_cols=163  Identities=15%  Similarity=0.179  Sum_probs=114.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||++++++..... |...|.+++|+|+    +.|++|+.|++|++||+++.++     ...+.+|..
T Consensus       134 ~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~----~~l~s~s~dg~i~vwd~~~~~~-----~~~~~~h~~  204 (464)
T 3v7d_B          134 YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG----GILVSGSTDRTVRVWDIKKGCC-----THVFEGHNS  204 (464)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST----TEEEEEETTSCEEEEETTTTEE-----EEEECCCSS
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC----CEEEEEeCCCCEEEEECCCCcE-----EEEECCCCC
Confidence            48999999999999999998876654 7789999999985    5899999999999999998653     345568999


Q ss_pred             CcEEEEEEcCC-CCCEEEEEcCCCcEEEEeccccccccccc------------------cceeeeecCC-----CCCCcc
Q psy6415          80 TTVWAAKHLPQ-NRDLFVTCGGSGSLNLWQLVSALRADTNL------------------CSIFRYSSNY-----PTQRTK  135 (174)
Q Consensus        80 ~~i~~v~fsP~-~~~~las~s~Dg~V~lWd~~~~~~~~~~~------------------~~~~~~~~~~-----~~~~~~  135 (174)
                       .|.+++|+|. ++.+|++|+.||+|++||+.+........                  ...+..+...     +.+..+
T Consensus       205 -~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  283 (464)
T 3v7d_B          205 -TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV  283 (464)
T ss_dssp             -CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEE
T ss_pred             -ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEE
Confidence             9999999952 55789999999999999995421110000                  0000000000     001111


Q ss_pred             --cCCCCCcc-ccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         136 --PDIDDIPM-GVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       136 --~~~dg~~~-~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                        ...||... -...+++.+.++.+|..+|.+++|+|+++-
T Consensus       284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  324 (464)
T 3v7d_B          284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKR  324 (464)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTE
T ss_pred             EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCE
Confidence              11333211 012455788999999999999999999763

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.84  E-value=2.1e-20  Score=153.00  Aligned_cols=126  Identities=11%  Similarity=0.086  Sum_probs=100.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|++|+.||+|++||+.+++..........+....|+|+   ++.|++|+.|+.|+|||+++.+.     ...+.+|.. 
T Consensus        70 ~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~h~~-  140 (420)
T 3vl1_A           70 HLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQ---MRRFILGTTEGDIKVLDSNFNLQ-----REIDQAHVS-  140 (420)
T ss_dssp             TEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSS---SCEEEEEETTSCEEEECTTSCEE-----EEETTSSSS-
T ss_pred             eEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecC---CCEEEEEECCCCEEEEeCCCcce-----eeecccccC-
Confidence            489999999999999987655433333333445567876   48999999999999999987643     334468999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+++|+| ++.+||+|+.||+|++||++                            +         ++.+.++.+|..
T Consensus       141 ~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~----------------------------~---------~~~~~~~~~h~~  182 (420)
T 3vl1_A          141 EITKLKFFP-SGEALISSSQDMQLKIWSVK----------------------------D---------GSNPRTLIGHRA  182 (420)
T ss_dssp             CEEEEEECT-TSSEEEEEETTSEEEEEETT----------------------------T---------CCCCEEEECCSS
T ss_pred             ccEEEEECC-CCCEEEEEeCCCeEEEEeCC----------------------------C---------CcCceEEcCCCC
Confidence            999999999 56799999999999999991                            1         235778889999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|.+++|+||++-
T Consensus       183 ~v~~~~~~~~~~~  195 (420)
T 3vl1_A          183 TVTDIAIIDRGRN  195 (420)
T ss_dssp             CEEEEEEETTTTE
T ss_pred             cEEEEEEcCCCCE
Confidence            9999999999863

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.83  E-value=2.5e-19  Score=141.50  Aligned_cols=162  Identities=14%  Similarity=0.087  Sum_probs=109.2

Q ss_pred             CEEEEecCCcEEEEECCCCCe--EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL--KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~--~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|++|+.||.|++||+++++.  ... ..+...|.+++|+|++   +.|++++.|+.|++||+++.+.     ...+..|
T Consensus       111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~v~~~d~~~~~~-----~~~~~~~  182 (337)
T 1gxr_A          111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQTL-----VRQFQGH  182 (337)
T ss_dssp             EEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECCC
T ss_pred             EEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC---CEEEEEeCCCcEEEEeCCCCce-----eeeeecc
Confidence            378999999999999998873  333 3456789999999964   8999999999999999998653     3345678


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCCccc--CCCCCcccc-ccccceee
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKP--DIDDIPMGV-PGSLTLLQ  153 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~dg~~~~~-~~~~~ll~  153 (174)
                      .. .|.+++|+| ++..|++++.||.|++||+++.................+ |++..+.  ..+|...-- .... .+.
T Consensus       183 ~~-~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~-~~~  259 (337)
T 1gxr_A          183 TD-GASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP-DKY  259 (337)
T ss_dssp             SS-CEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS-CEE
T ss_pred             cC-ceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-CeE
Confidence            88 999999999 567899999999999999944111000000000111222 3332221  123321100 1122 244


Q ss_pred             eeeccccceeeeeeCCCCCC
Q psy6415         154 EATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       154 ~~~~h~~~V~~l~~spd~~~  173 (174)
                      .+.+|..+|.+++|+||++-
T Consensus       260 ~~~~~~~~v~~~~~~~~~~~  279 (337)
T 1gxr_A          260 QLHLHESCVLSLKFAYCGKW  279 (337)
T ss_dssp             EECCCSSCEEEEEECTTSSE
T ss_pred             EEcCCccceeEEEECCCCCE
Confidence            67889999999999999863

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.83  E-value=2.3e-20  Score=153.73  Aligned_cols=103  Identities=9%  Similarity=0.198  Sum_probs=80.5

Q ss_pred             EEEEecCCcEEEEECCCCCeE-----------------------------------------EEeecCCCEEEEEecCCC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLK-----------------------------------------WETNLKNGVCGVDFDRRD   40 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~-----------------------------------------~~~~~~~~V~sv~f~~~~   40 (174)
                      |++|+.||+|++||++++...                                         ....|...|.+++|+|++
T Consensus       110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  189 (447)
T 3dw8_B          110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY  189 (447)
T ss_dssp             EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS
T ss_pred             EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC
Confidence            789999999999999764431                                         112467889999999974


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCcc-cccce--eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          41 IPMNKLVATTLEAKLFVFDLKTLH-REKGF--AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        41 ~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~~--~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                         +.|++| .|++|+|||+++.. +...+  ....+.+|.. .|++++|+|+++.+||+|+.||+|++||+
T Consensus       190 ---~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~  256 (447)
T 3dw8_B          190 ---ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE-VITAAEFHPNSCNTFVYSSSKGTIRLCDM  256 (447)
T ss_dssp             ---SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC-CEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred             ---CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc-ceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence               889998 89999999999432 11100  0013568888 99999999965589999999999999999

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.83  E-value=4.4e-20  Score=157.24  Aligned_cols=127  Identities=16%  Similarity=0.295  Sum_probs=105.3

Q ss_pred             CEEEEec-CCcEEEEECCCCCeE-EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc-
Q psy6415           1 MVVAGYD-NGDLKMFDLKTMSLK-WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA-   76 (174)
Q Consensus         1 ~lasgs~-Dg~iklWDl~~~~~~-~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~-   76 (174)
                      +|++|+. ||.|++||+.++... .. ..|...|.+++|+|++   +.|++++.|+.|+|||+++.+..     ..+.+ 
T Consensus       458 ~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g---~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~  529 (615)
T 1pgu_A          458 YVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE---TYIAAGDVMGKILLYDLQSREVK-----TSRWAF  529 (615)
T ss_dssp             EEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEE-----ECCSCC
T ss_pred             EEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCC---CEEEEcCCCCeEEEeeCCCCcce-----eEeecC
Confidence            3788999 999999999987664 22 3467889999999974   89999999999999999986543     33445 


Q ss_pred             cCcCcEEEEEEcCC---------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415          77 HKATTVWAAKHLPQ---------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG  147 (174)
Q Consensus        77 h~~~~i~~v~fsP~---------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~  147 (174)
                      |.. .|++++|+|.         ++.+||+|+.||+|++||++                            ++       
T Consensus       530 h~~-~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~----------------------------~~-------  573 (615)
T 1pgu_A          530 RTS-KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK----------------------------RP-------  573 (615)
T ss_dssp             CSS-CEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS----------------------------CT-------
T ss_pred             CCC-ceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC----------------------------CC-------
Confidence            888 9999999992         35699999999999999991                            11       


Q ss_pred             ccceeeeeeccccceeeeeeCCCCC
Q psy6415         148 SLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       148 ~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                       .+++..+.+|..+|++++|+||++
T Consensus       574 -~~~~~~~~~h~~~v~~l~~s~~~~  597 (615)
T 1pgu_A          574 -MKIIKALNAHKDGVNNLLWETPST  597 (615)
T ss_dssp             -TCCEEETTSSTTCEEEEEEEETTE
T ss_pred             -ceechhhhcCccceEEEEEcCCCC
Confidence             146788899999999999999986

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.83  E-value=2.7e-19  Score=144.75  Aligned_cols=146  Identities=16%  Similarity=0.207  Sum_probs=111.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|++|+.||.|++||+++++......+...+.+++|+|...++..+++++.|+.|++||+++.+..     ..+..|.. 
T Consensus       114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-----~~~~~~~~-  187 (408)
T 4a11_B          114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS-----HILQGHRQ-  187 (408)
T ss_dssp             CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC-----EEECCCCS-
T ss_pred             EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee-----eeecCCCC-
Confidence            489999999999999999988877778889999999997544568999999999999999986543     34568888 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+++|+|++..+||+|+.||.|++||+.+    ...  ....+..          .++.     ....+...+.+|..
T Consensus       188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~----~~~--~~~~~~~----------~~~~-----~~~~~~~~~~~~~~  246 (408)
T 4a11_B          188 EILAVSWSPRYDYILATASADSRVKLWDVRR----ASG--CLITLDQ----------HNGK-----KSQAVESANTAHNG  246 (408)
T ss_dssp             CEEEEEECSSCTTEEEEEETTSCEEEEETTC----SSC--CSEECCT----------TTTC-----SCCCTTTSSCSCSS
T ss_pred             cEEEEEECCCCCcEEEEEcCCCcEEEEECCC----CCc--ccccccc----------cccc-----cceeeccccccccC
Confidence            9999999997666899999999999999921    100  0000000          0110     01124556678999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|++++|+||++-
T Consensus       247 ~v~~~~~~~~~~~  259 (408)
T 4a11_B          247 KVNGLCFTSDGLH  259 (408)
T ss_dssp             CEEEEEECTTSSE
T ss_pred             ceeEEEEcCCCCE
Confidence            9999999999863

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.83  E-value=3e-19  Score=144.45  Aligned_cols=168  Identities=13%  Similarity=0.126  Sum_probs=111.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc-cce---------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE-KGF---------   69 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~-~~~---------   69 (174)
                      +|++|+.||.|++||+++++...... |...|.+++|+|++  ...|++++.|+.|++||+++.... ..+         
T Consensus       158 ~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~  235 (408)
T 4a11_B          158 LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY--DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQ  235 (408)
T ss_dssp             EEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC--TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCC
T ss_pred             EEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC--CcEEEEEcCCCcEEEEECCCCCcccccccccccccce
Confidence            37899999999999999888766554 67889999999974  236899999999999999875411 100         


Q ss_pred             -eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccccc---------ccceeeeecCCCCCCcccCCC
Q psy6415          70 -AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTN---------LCSIFRYSSNYPTQRTKPDID  139 (174)
Q Consensus        70 -~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~d  139 (174)
                       .......|.. .|.+++|+| ++..|++++.||.|++||+.+..+....         ....+...............+
T Consensus       236 ~~~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (408)
T 4a11_B          236 AVESANTAHNG-KVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG  313 (408)
T ss_dssp             CTTTSSCSCSS-CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred             eeccccccccC-ceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence             0111246888 999999999 5678999999999999999441110000         000000000000000000112


Q ss_pred             CCcccc--ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         140 DIPMGV--PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       140 g~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      | .+.+  ..+++++.++.+|..+|.+++|+||++-
T Consensus       314 ~-~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~  348 (408)
T 4a11_B          314 S-TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE  348 (408)
T ss_dssp             T-EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred             C-EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence            2 1111  2445788999999999999999999863

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.83  E-value=1.3e-19  Score=145.50  Aligned_cols=130  Identities=9%  Similarity=0.037  Sum_probs=103.3

Q ss_pred             CEEEEecCCcEEEEECCCCCe---EEE--eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc----------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL---KWE--TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR----------   65 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~---~~~--~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~----------   65 (174)
                      +|++|+.||.|++||++++..   ...  ..|...|.+++|+|++   +.|++++.|+.|++||++....          
T Consensus       110 ~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~  186 (372)
T 1k8k_C          110 KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS---VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG  186 (372)
T ss_dssp             EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS---SEEEEEETTSCEEEEECCCTTTSCCCCCBTTB
T ss_pred             EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC---CEEEEEcCCCCEEEEEcccccccccccccccc
Confidence            478999999999999988762   222  2356789999999964   8999999999999999753210          


Q ss_pred             ---ccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415          66 ---EKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP  142 (174)
Q Consensus        66 ---~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~  142 (174)
                         ........+..|.. .|.+++|+| ++.+|++++.||+|++||++                                
T Consensus       187 ~~~~~~~~~~~~~~~~~-~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~--------------------------------  232 (372)
T 1k8k_C          187 SKMPFGELMFESSSSCG-WVHGVCFSA-NGSRVAWVSHDSTVCLADAD--------------------------------  232 (372)
T ss_dssp             SCCCTTCEEEECCCCSS-CEEEEEECS-SSSEEEEEETTTEEEEEEGG--------------------------------
T ss_pred             cccchhhheEecCCCCC-eEEEEEECC-CCCEEEEEeCCCEEEEEECC--------------------------------
Confidence               01123445568888 999999999 56799999999999999991                                


Q ss_pred             cccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         143 MGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       143 ~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                           +++++.++.+|..+|++++|+|+++
T Consensus       233 -----~~~~~~~~~~~~~~v~~~~~~~~~~  257 (372)
T 1k8k_C          233 -----KKMAVATLASETLPLLAVTFITESS  257 (372)
T ss_dssp             -----GTTEEEEEECSSCCEEEEEEEETTE
T ss_pred             -----CCceeEEEccCCCCeEEEEEecCCC
Confidence                 1246788899999999999999975

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.83  E-value=2e-19  Score=165.78  Aligned_cols=126  Identities=17%  Similarity=0.173  Sum_probs=108.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|++||+.+++..... .|...|.+++|+|++   +.||+++.|++|+|||++++++     ..++.+|..
T Consensus       629 ~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~d~~v~vwd~~~~~~-----~~~~~~~~~  700 (1249)
T 3sfz_A          629 RIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD---SYIATCSADKKVKIWDSATGKL-----VHTYDEHSE  700 (1249)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCE-----EEEEECCSS
T ss_pred             EEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCC---CEEEEEeCCCeEEEEECCCCce-----EEEEcCCCC
Confidence            4799999999999999999887665 477889999999974   8999999999999999998754     345568999


Q ss_pred             CcEEEEEEcCC-CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          80 TTVWAAKHLPQ-NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        80 ~~i~~v~fsP~-~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                       .|++++|+|+ +..++++|+.||+|++||++                            .         ++.+.++.+|
T Consensus       701 -~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~----------------------------~---------~~~~~~~~~h  742 (1249)
T 3sfz_A          701 -QVNCCHFTNKSNHLLLATGSNDFFLKLWDLN----------------------------Q---------KECRNTMFGH  742 (1249)
T ss_dssp             -CEEEEEECSSSSCCEEEEEETTSCEEEEETT----------------------------S---------SSEEEEECCC
T ss_pred             -cEEEEEEecCCCceEEEEEeCCCeEEEEECC----------------------------C---------cchhheecCC
Confidence             9999999995 34589999999999999991                            1         2467888999


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      ..+|++++|+||++
T Consensus       743 ~~~v~~~~~sp~~~  756 (1249)
T 3sfz_A          743 TNSVNHCRFSPDDE  756 (1249)
T ss_dssp             SSCEEEEEECSSTT
T ss_pred             CCCEEEEEEecCCC
Confidence            99999999999986

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.82  E-value=1.6e-19  Score=144.05  Aligned_cols=153  Identities=18%  Similarity=0.283  Sum_probs=106.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||+++++...... |...|.+++|+|.+  ++.|++++.|++|+|||+++.+....+  ..+.+|..
T Consensus        87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~  162 (366)
T 3k26_A           87 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRD--PNLLLSVSKDHALRLWNIQTDTLVAIF--GGVEGHRD  162 (366)
T ss_dssp             EEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSC--TTEEEEEETTSCEEEEETTTTEEEEEE--CSTTSCSS
T ss_pred             EEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCC--CCEEEEEeCCCeEEEEEeecCeEEEEe--cccccccC
Confidence            38999999999999999998876654 77889999999932  489999999999999999986543211  11257888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCC-CCCCcccCCCCCccccccccceeeeeecc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNY-PTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                       .|.+++|+| ++..|++++.||+|++||+++....     ..+.....+ |+........     .......+....+|
T Consensus       163 -~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  230 (366)
T 3k26_A          163 -EVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMM-----NAIKESYDYNPNKTNRPFIS-----QKIHFPDFSTRDIH  230 (366)
T ss_dssp             -CEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHH-----HHHHHHHTCCGGGCSSCCCC-----EEECCCSEEECSSC
T ss_pred             -ceeEEEECC-CCCEEEEecCCCCEEEEECCCCccc-----cccceeEEecCCCCcccccc-----eeeccCccccccCC
Confidence             999999999 5678999999999999999331000     001111111 1111000000     00111245666789


Q ss_pred             ccceeeeeeCC
Q psy6415         159 SQPINSLDWSA  169 (174)
Q Consensus       159 ~~~V~~l~~sp  169 (174)
                      ..+|.+++|++
T Consensus       231 ~~~v~~~~~~~  241 (366)
T 3k26_A          231 RNYVDCVRWLG  241 (366)
T ss_dssp             SSCCCEEEEET
T ss_pred             cceEEEEEEcC
Confidence            99999999983

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.82  E-value=1.5e-19  Score=147.28  Aligned_cols=95  Identities=12%  Similarity=0.169  Sum_probs=80.0

Q ss_pred             EecCCcEEEEECCCCC-----------------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc-EEEEECCCcccc
Q psy6415           5 GYDNGDLKMFDLKTMS-----------------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK-LFVFDLKTLHRE   66 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~-----------------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~-I~iWD~~~~~~~   66 (174)
                      |+.||+|++||++++.                 ......|...|++++|+|++   ++||+|+.|++ |+|||+++.++.
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g---~~l~s~s~d~~~v~iwd~~~~~~~  231 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS---DMVATCSQDGTIIRVFKTEDGVLV  231 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS---SEEEEEETTCSEEEEEETTTCCEE
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC---CEEEEEeCCCCEEEEEECCCCcEE
Confidence            6899999999999865                 33334578899999999974   89999999998 999999987643


Q ss_pred             cceeeeeec-c-cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          67 KGFAYLSEK-A-HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        67 ~~~~~~~~~-~-h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                           .++. + |.. .|++++|+| ++.+||+|+.|++|++||+
T Consensus       232 -----~~~~~g~h~~-~v~~~~~s~-~~~~l~s~s~d~~v~iw~~  269 (355)
T 3vu4_A          232 -----REFRRGLDRA-DVVDMKWST-DGSKLAVVSDKWTLHVFEI  269 (355)
T ss_dssp             -----EEEECTTCCS-CEEEEEECT-TSCEEEEEETTCEEEEEES
T ss_pred             -----EEEEcCCCCC-cEEEEEECC-CCCEEEEEECCCEEEEEEc
Confidence                 3444 4 888 999999999 5679999999999999999

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.82  E-value=8.2e-19  Score=139.11  Aligned_cols=163  Identities=12%  Similarity=0.082  Sum_probs=109.1

Q ss_pred             CEEEEecCCcEEEEECCCCCe-----EEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-----KWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-----~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +||||+.||+|+|||+++.+.     ... ..|...|.+++|+|++   +.|++++.|+.|++|+.......     ...
T Consensus        53 ~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg---~~l~s~~~d~~i~~~~~~~~~~~-----~~~  124 (340)
T 4aow_A           53 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG---QFALSGSWDGTLRLWDLTTGTTT-----RRF  124 (340)
T ss_dssp             EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEE-----EEE
T ss_pred             EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC---CEEEEEcccccceEEeeccccee-----eee
Confidence            489999999999999987542     222 3467889999999974   89999999999999999875432     233


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccc----cccccceeeeecCC-CCCCcc--cCCCCCcc-ccc
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRA----DTNLCSIFRYSSNY-PTQRTK--PDIDDIPM-GVP  146 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~----~~~~~~~~~~~~~~-~~~~~~--~~~dg~~~-~~~  146 (174)
                      ..+.. .+..+.++|. +..|++|+.||.+++||+....+.    ......+..+.... +.....  ...|+... ...
T Consensus       125 ~~~~~-~~~~~~~~~~-~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~  202 (340)
T 4aow_A          125 VGHTK-DVLSVAFSSD-NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL  202 (340)
T ss_dssp             ECCSS-CEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred             cCCCC-ceeEEEEeec-CccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEEC
Confidence            45666 7889999995 568899999999999998431110    00000111111010 111111  11233110 112


Q ss_pred             cccceeeeeeccccceeeeeeCCCCCC
Q psy6415         147 GSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       147 ~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      .+.+++.++.+|..+|++|+|+||++-
T Consensus       203 ~~~~~~~~~~~h~~~v~~~~~s~~~~~  229 (340)
T 4aow_A          203 ANCKLKTNHIGHTGYLNTVTVSPDGSL  229 (340)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             CCCceeeEecCCCCcEEEEEECCCCCE
Confidence            445688899999999999999999863

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.82  E-value=6.2e-19  Score=139.21  Aligned_cols=124  Identities=15%  Similarity=0.185  Sum_probs=103.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .|++|+.||.|++||+++++......+...+.+++|+|++   +.|++++.|+.|++||+++.+.      ..+..|.. 
T Consensus       197 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~-  266 (337)
T 1gxr_A          197 KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG---EWLAVGMESSNVEVLHVNKPDK------YQLHLHES-  266 (337)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTS---SEEEEEETTSCEEEEETTSSCE------EEECCCSS-
T ss_pred             EEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCC---CEEEEEcCCCcEEEEECCCCCe------EEEcCCcc-
Confidence            3789999999999999999888777788899999999974   8999999999999999998642      23458888 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+++|+| ++.+|++++.||.|++||++                            .|         +.+.. ..|..
T Consensus       267 ~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~----------------------------~~---------~~~~~-~~~~~  307 (337)
T 1gxr_A          267 CVLSLKFAY-CGKWFVSTGKDNLLNAWRTP----------------------------YG---------ASIFQ-SKESS  307 (337)
T ss_dssp             CEEEEEECT-TSSEEEEEETTSEEEEEETT----------------------------TC---------CEEEE-EECSS
T ss_pred             ceeEEEECC-CCCEEEEecCCCcEEEEECC----------------------------CC---------eEEEE-ecCCC
Confidence            999999999 56789999999999999991                            11         22322 35789


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|.+++|+||++-
T Consensus       308 ~v~~~~~s~~~~~  320 (337)
T 1gxr_A          308 SVLSCDISVDDKY  320 (337)
T ss_dssp             CEEEEEECTTSCE
T ss_pred             cEEEEEECCCCCE
Confidence            9999999999863

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.82  E-value=2e-19  Score=140.95  Aligned_cols=123  Identities=16%  Similarity=0.240  Sum_probs=99.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +|++|+.||.|++||.+.........+...|.+++|+|+    ..|++++.|+.|++||+++.++.     ..+.+|.. 
T Consensus       157 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~-  226 (313)
T 3odt_A          157 KFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDD----GHFISCSNDGLIKLVDMHTGDVL-----RTYEGHES-  226 (313)
T ss_dssp             EEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEET----TEEEEEETTSEEEEEETTTCCEE-----EEEECCSS-
T ss_pred             EEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCC----CeEEEccCCCeEEEEECCchhhh-----hhhhcCCc-
Confidence            378999999999999443222222236788999999996    34999999999999999986543     34568888 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+++|+|++  .|++++.||+|++||++                            +         ++++..+..|..
T Consensus       227 ~i~~~~~~~~~--~l~~~~~dg~v~iwd~~----------------------------~---------~~~~~~~~~~~~  267 (313)
T 3odt_A          227 FVYCIKLLPNG--DIVSCGEDRTVRIWSKE----------------------------N---------GSLKQVITLPAI  267 (313)
T ss_dssp             CEEEEEECTTS--CEEEEETTSEEEEECTT----------------------------T---------CCEEEEEECSSS
T ss_pred             eEEEEEEecCC--CEEEEecCCEEEEEECC----------------------------C---------CceeEEEeccCc
Confidence            99999999954  47899999999999991                            2         246788899999


Q ss_pred             ceeeeeeCCCCC
Q psy6415         161 PINSLDWSADKL  172 (174)
Q Consensus       161 ~V~~l~~spd~~  172 (174)
                      +|.+++|+||++
T Consensus       268 ~i~~~~~~~~~~  279 (313)
T 3odt_A          268 SIWSVDCMSNGD  279 (313)
T ss_dssp             CEEEEEECTTSC
T ss_pred             eEEEEEEccCCC
Confidence            999999999986

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.82  E-value=2.7e-19  Score=142.64  Aligned_cols=100  Identities=17%  Similarity=0.225  Sum_probs=83.9

Q ss_pred             CEEEEecCCcEEEEECCC-CCeE-E-EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKT-MSLK-W-ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~-~~~~-~-~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||+|+.||.|+|||+++ +... . ...|...|++++|+|++   +.|++++.|++|+|||+++.+..      ....|
T Consensus        56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~------~~~~~  126 (368)
T 3mmy_A           56 FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG---SKVFTASCDKTAKMWDLSSNQAI------QIAQH  126 (368)
T ss_dssp             EEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEE------EEEEC
T ss_pred             EEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC---CEEEEEcCCCcEEEEEcCCCCce------eeccc
Confidence            489999999999999987 5443 2 24578899999999964   89999999999999999986532      23478


Q ss_pred             CcCcEEEEEE--cCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          78 KATTVWAAKH--LPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        78 ~~~~i~~v~f--sP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .. .|++++|  +| ++.+|++|+.||+|++||+++
T Consensus       127 ~~-~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~  160 (368)
T 3mmy_A          127 DA-PVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRS  160 (368)
T ss_dssp             SS-CEEEEEEEECS-SCEEEEEEETTSEEEEECSSC
T ss_pred             cC-ceEEEEEEeCC-CCCEEEEccCCCcEEEEECCC
Confidence            88 9999999  78 566899999999999999954

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.82  E-value=1.5e-19  Score=147.41  Aligned_cols=106  Identities=17%  Similarity=0.324  Sum_probs=85.2

Q ss_pred             CEEEEecCCcEEEEECCC----CCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc----cceee
Q psy6415           1 MVVAGYDNGDLKMFDLKT----MSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE----KGFAY   71 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~----~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~----~~~~~   71 (174)
                      +||+|+.||.|++||+++    ...... ..|...|++++|+|++  ++.|++++.|++|+|||+++.+..    ..+..
T Consensus        81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  158 (416)
T 2pm9_A           81 IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ--DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP  158 (416)
T ss_dssp             CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS--TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC
T ss_pred             eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC--CCEEEEEcCCCeEEEEECCCCcccccccccccc
Confidence            589999999999999987    334443 3477889999999973  489999999999999999986510    01112


Q ss_pred             eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .....|.. .|++++|+|+++.+|++++.||+|++||+
T Consensus       159 ~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~v~iwd~  195 (416)
T 2pm9_A          159 GQSMSSVD-EVISLAWNQSLAHVFASAGSSNFASIWDL  195 (416)
T ss_dssp             CCSCCSSC-CCCEEEECSSCTTEEEEESSSSCEEEEET
T ss_pred             ccccCCCC-CeeEEEeCCCCCcEEEEEcCCCCEEEEEC
Confidence            23357888 99999999976789999999999999999

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.82  E-value=3.1e-19  Score=143.21  Aligned_cols=147  Identities=12%  Similarity=0.053  Sum_probs=107.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|++|+.||+|++||+++++....   ..+...|.+++|+|++   +.|++++.|+.|++||++....... .......|
T Consensus        66 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~i~d~~~~~~~~~-~~~~~~~~  141 (372)
T 1k8k_C           66 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE---KKFAVGSGSRVISICYFEQENDWWV-CKHIKKPI  141 (372)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS---SEEEEEETTSSEEEEEEETTTTEEE-EEEECTTC
T ss_pred             EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC---CEEEEEeCCCEEEEEEecCCCccee-eeeeeccc
Confidence            478999999999999988875433   3467889999999974   8999999999999999998652110 11222477


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|.+++|+| ++.+|++|+.||.|++||++.......            +....+.. .      ...++++..+.+
T Consensus       142 ~~-~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~------------~~~~~~~~-~------~~~~~~~~~~~~  200 (372)
T 1k8k_C          142 RS-TVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEER------------PAPTPWGS-K------MPFGELMFESSS  200 (372)
T ss_dssp             CS-CEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCC------------CCCBTTBS-C------CCTTCEEEECCC
T ss_pred             CC-CeeEEEEcC-CCCEEEEEcCCCCEEEEEccccccccc------------cccccccc-c------cchhhheEecCC
Confidence            88 999999999 567999999999999999821000000            00000000 0      123457888999


Q ss_pred             cccceeeeeeCCCCC
Q psy6415         158 SSQPINSLDWSADKL  172 (174)
Q Consensus       158 h~~~V~~l~~spd~~  172 (174)
                      |..+|.+++|+|+++
T Consensus       201 ~~~~v~~~~~~~~~~  215 (372)
T 1k8k_C          201 SCGWVHGVCFSANGS  215 (372)
T ss_dssp             CSSCEEEEEECSSSS
T ss_pred             CCCeEEEEEECCCCC
Confidence            999999999999985

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.82  E-value=3.3e-19  Score=144.74  Aligned_cols=145  Identities=14%  Similarity=0.195  Sum_probs=107.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||.|++||+++++...... +...|.+++|+|+   + .|++++.|+.|++||+++.+.     ...+..|..
T Consensus       261 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~---~-~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~  331 (425)
T 1r5m_A          261 LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD---D-KVISCSMDGSVRLWSLKQNTL-----LALSIVDGV  331 (425)
T ss_dssp             EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETT---T-EEEEEETTSEEEEEETTTTEE-----EEEEECTTC
T ss_pred             EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCC---C-EEEEEeCCCcEEEEECCCCcE-----eEecccCCc
Confidence            47899999999999999888766553 6788999999995   3 899999999999999998653     334457888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.+++|+| ++.+||+++.||.|++||+.+.....   ..  .+          ...++..  .....+++..+.+|.
T Consensus       332 -~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~---~~--~~----------~~~~~~~--~~~~~~~~~~~~~~~  392 (425)
T 1r5m_A          332 -PIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKS---RS--LY----------GNRDGIL--NPLPIPLYASYQSSQ  392 (425)
T ss_dssp             -CEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC-------------------------------CEECCEEEEECCTT
T ss_pred             -cEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccce---ee--ee----------ccccccc--CcccchhhhhhcCcc
Confidence             999999999 56799999999999999993210000   00  00          0001100  011124789999997


Q ss_pred             c--ceeeeeeCCCCCC
Q psy6415         160 Q--PINSLDWSADKLG  173 (174)
Q Consensus       160 ~--~V~~l~~spd~~~  173 (174)
                      .  +|++++|+||++-
T Consensus       393 ~~~~v~~~~~s~~~~~  408 (425)
T 1r5m_A          393 DNDYIFDLSWNCAGNK  408 (425)
T ss_dssp             CCCCEEEEEECTTSSE
T ss_pred             cCCceEEEEccCCCce
Confidence            7  9999999999863

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.82  E-value=4e-19  Score=155.93  Aligned_cols=126  Identities=17%  Similarity=0.234  Sum_probs=98.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe----ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET----NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~----~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|+||+.|++|+|||++........    .|...|.+++|+|++ ....|++++.|++|+|||+++.++     ..++.+
T Consensus       486 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~s~d~~v~vwd~~~~~~-----~~~~~~  559 (694)
T 3dm0_A          486 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT-LQPTIVSASWDKTVKVWNLSNCKL-----RSTLAG  559 (694)
T ss_dssp             CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS-SSCEEEEEETTSCEEEEETTTCCE-----EEEECC
T ss_pred             EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC-CcceEEEEeCCCeEEEEECCCCcE-----EEEEcC
Confidence            4899999999999998765433221    356779999999964 235799999999999999998653     345578


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT  156 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~  156 (174)
                      |.. .|++++|+| ++.+||||+.||+|+|||+.                            .         ++.+.++.
T Consensus       560 h~~-~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~----------------------------~---------~~~~~~~~  600 (694)
T 3dm0_A          560 HTG-YVSTVAVSP-DGSLCASGGKDGVVLLWDLA----------------------------E---------GKKLYSLE  600 (694)
T ss_dssp             CSS-CEEEEEECT-TSSEEEEEETTSBCEEEETT----------------------------T---------TEEEECCB
T ss_pred             CCC-CEEEEEEeC-CCCEEEEEeCCCeEEEEECC----------------------------C---------CceEEEec
Confidence            999 999999999 56799999999999999991                            1         23455554


Q ss_pred             ccccceeeeeeCCCCC
Q psy6415         157 LSSQPINSLDWSADKL  172 (174)
Q Consensus       157 ~h~~~V~~l~~spd~~  172 (174)
                      . ...|++++|||++.
T Consensus       601 ~-~~~v~~~~~sp~~~  615 (694)
T 3dm0_A          601 A-NSVIHALCFSPNRY  615 (694)
T ss_dssp             C-SSCEEEEEECSSSS
T ss_pred             C-CCcEEEEEEcCCCc
Confidence            4 45789999999875

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.81  E-value=1.1e-18  Score=144.53  Aligned_cols=142  Identities=13%  Similarity=0.123  Sum_probs=95.4

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEE--cCCCcE
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTC--GGSGSL  104 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~--s~Dg~V  104 (174)
                      |...++.+.|+|++   +.+++++.|+.|+|||+++.+.... .......|.. .|.+++|+|.+..+++++  +.|++|
T Consensus       229 h~~~~~~~~~~~~g---~~l~s~~~D~~v~i~~~~~~~~~~~-~~~~~~~~~~-~V~~~~~~p~~~~~la~~~gs~D~~I  303 (420)
T 4gga_A          229 HSQEVCGLRWAPDG---RHLASGGNDNLVNVWPSAPGEGGWV-PLQTFTQHQG-AVKAVAWCPWQSNVLATGGGTSDRHI  303 (420)
T ss_dssp             CSSCEEEEEECTTS---SEEEEEETTSCEEEEESSCCSSCSC-CSEEECCCSS-CEEEEEECTTCTTEEEEEECTTTCEE
T ss_pred             cccceeeeeecCCC---CeeeeeeccccceEEeeccccccce-eeeeecccCC-ceeeeeeCCCcccEEEEEeecCCCEE
Confidence            55678899999974   8999999999999999987653321 2334567888 999999999988888764  579999


Q ss_pred             EEEeccccccccccccceeeeecCC-CCCCccc----CCCCCcccc--ccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         105 NLWQLVSALRADTNLCSIFRYSSNY-PTQRTKP----DIDDIPMGV--PGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       105 ~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~dg~~~~~--~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      ++||+.+.............+...+ |....+.    ..||. +.+  ..+++++.++.||+.+|++|+|||||+-|
T Consensus       304 ~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l  379 (420)
T 4gga_A          304 RIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATV  379 (420)
T ss_dssp             EEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred             EEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence            9999944111000000001111111 2222221    12332 111  35567899999999999999999998743

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.81  E-value=7.7e-19  Score=140.05  Aligned_cols=162  Identities=9%  Similarity=0.073  Sum_probs=113.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||.|++||+.+++...... |...|.+++|+|++   +.|++++.|++|++||+++.++..     .+ .|..
T Consensus        46 ~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~-----~~-~~~~  116 (369)
T 3zwl_B           46 LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT---KYCVTGSADYSIKLWDVSNGQCVA-----TW-KSPV  116 (369)
T ss_dssp             EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS---SEEEEEETTTEEEEEETTTCCEEE-----EE-ECSS
T ss_pred             EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC---CEEEEEeCCCeEEEEECCCCcEEE-----Ee-ecCC
Confidence            48999999999999999998876654 77889999999964   899999999999999999876432     23 3667


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCC-----CcEEEEeccccccccc------cccce--------eeeecCC-CCCCccc--C
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGS-----GSLNLWQLVSALRADT------NLCSI--------FRYSSNY-PTQRTKP--D  137 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~D-----g~V~lWd~~~~~~~~~------~~~~~--------~~~~~~~-~~~~~~~--~  137 (174)
                       .|.+++|+| ++..|++++.+     |.|++||++.......      .....        ......+ |++..++  .
T Consensus       117 -~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  194 (369)
T 3zwl_B          117 -PVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH  194 (369)
T ss_dssp             -CEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred             -CeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence             899999999 56788999998     9999999944111000      00000        0011111 2222111  1


Q ss_pred             CCCCcc-ccccc-cceeeeeeccccceeeeeeCCCCCC
Q psy6415         138 IDDIPM-GVPGS-LTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       138 ~dg~~~-~~~~~-~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      .||... ....+ .+.+..+.+|..+|.+++|+||++-
T Consensus       195 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  232 (369)
T 3zwl_B          195 KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTY  232 (369)
T ss_dssp             TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred             CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCE
Confidence            333111 01222 4678899999999999999999863

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.81  E-value=2.1e-18  Score=135.58  Aligned_cols=102  Identities=13%  Similarity=0.225  Sum_probs=81.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce---------
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF---------   69 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~---------   69 (174)
                      ||+| .|++|+|||+.++++.....   |...|++|+|+|++   +.||+|+.|++|+|||+++.++...+         
T Consensus        39 lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~---~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~  114 (318)
T 4ggc_A           39 LAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS  114 (318)
T ss_dssp             EEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             EEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC---CEEEEEECCCcEEEeecCCceeEEEecCccceEEE
Confidence            5555 58999999999999876543   45679999999974   89999999999999999986532211         


Q ss_pred             ---------------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          70 ---------------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ---------------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                                                 ....+.+|.. .+..++|+| ++.+|++++.||+|++||+
T Consensus       115 ~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~s~~~d~~i~iwd~  179 (318)
T 4ggc_A          115 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAP-DGRHLASGGNDNLVNVWPS  179 (318)
T ss_dssp             EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECT-TSSEEEEEETTSCEEEEES
T ss_pred             eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC-ceEEEEEcC-CCCEEEEEecCcceeEEEC
Confidence                                       1123446777 889999999 4578999999999999999

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.81  E-value=3.5e-19  Score=157.11  Aligned_cols=125  Identities=14%  Similarity=0.217  Sum_probs=105.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||+|+|||++++....... |...|.+++|+|++   +.|++++.|+.|+|||+++.+.     ...+.+|..
T Consensus        27 ~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~vw~~~~~~~-----~~~~~~~~~   98 (814)
T 3mkq_A           27 WVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK---NWIIVGSDDFRIRVFNYNTGEK-----VVDFEAHPD   98 (814)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG---TEEEEEETTSEEEEEETTTCCE-----EEEEECCSS
T ss_pred             EEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC---CEEEEEeCCCeEEEEECCCCcE-----EEEEecCCC
Confidence            48999999999999999998776654 67889999999974   8999999999999999998654     334568998


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++|+|+ +..|++|+.||+|++||++                            .+        ..+...+.+|.
T Consensus        99 -~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~----------------------------~~--------~~~~~~~~~~~  140 (814)
T 3mkq_A           99 -YIRSIAVHPT-KPYVLSGSDDLTVKLWNWE----------------------------NN--------WALEQTFEGHE  140 (814)
T ss_dssp             -CEEEEEECSS-SSEEEEEETTSEEEEEEGG----------------------------GT--------SEEEEEEECCS
T ss_pred             -CEEEEEEeCC-CCEEEEEcCCCEEEEEECC----------------------------CC--------ceEEEEEcCCC
Confidence             9999999994 5689999999999999991                            11        13577888999


Q ss_pred             cceeeeeeCC-CC
Q psy6415         160 QPINSLDWSA-DK  171 (174)
Q Consensus       160 ~~V~~l~~sp-d~  171 (174)
                      .+|.+++|+| ++
T Consensus       141 ~~v~~~~~~p~~~  153 (814)
T 3mkq_A          141 HFVMCVAFNPKDP  153 (814)
T ss_dssp             SCEEEEEEETTEE
T ss_pred             CcEEEEEEEcCCC
Confidence            9999999999 55

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.80  E-value=4.1e-19  Score=145.43  Aligned_cols=99  Identities=17%  Similarity=0.224  Sum_probs=82.2

Q ss_pred             EEEEecCC----cEEEEECCCCCeEE-----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           2 VVAGYDNG----DLKMFDLKTMSLKW-----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         2 lasgs~Dg----~iklWDl~~~~~~~-----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      |++++.|+    ++++||++......     ...+...|++++|+|++   ++||+|+.|++|+|||+++.+++..    
T Consensus       234 l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg---~~lasgs~D~~V~iwd~~~~~~~~~----  306 (365)
T 4h5i_A          234 LIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG---ELAVLASNDNSIALVKLKDLSMSKI----  306 (365)
T ss_dssp             EEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS---CEEEEEETTSCEEEEETTTTEEEEE----
T ss_pred             EEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC---CceEEEcCCCEEEEEECCCCcEEEE----
Confidence            67888887    68899987765422     23456789999999974   8999999999999999998764322    


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.+|.. .|++|+||| ++.+|||||.|++|+|||+
T Consensus       307 ~~~gH~~-~V~~v~fSp-dg~~laS~S~D~tvrvw~i  341 (365)
T 4h5i_A          307 FKQAHSF-AITEVTISP-DSTYVASVSAANTIHIIKL  341 (365)
T ss_dssp             ETTSSSS-CEEEEEECT-TSCEEEEEETTSEEEEEEC
T ss_pred             ecCcccC-CEEEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence            2368999 999999999 5679999999999999999

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.80  E-value=1.1e-18  Score=137.26  Aligned_cols=128  Identities=13%  Similarity=0.110  Sum_probs=97.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeE-----EEeecCCCEEEEEecCCCCCCCEE--EEEeCCCcEEEEECCCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK-----WETNLKNGVCGVDFDRRDIPMNKL--VATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~-----~~~~~~~~V~sv~f~~~~~~~~~l--~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +|++|+.||+|++||+++++..     ....+...|.+++++|.+  .+.+  ++++.+++|+|||.+......      
T Consensus       164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~i~lwd~~~~~~~~------  235 (318)
T 4ggc_A          164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ--SNVLATGGGTSDRHIRIWNVCSGACLS------  235 (318)
T ss_dssp             EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTS--TTEEEEEECTTTCEEEEEETTTCCEEE------
T ss_pred             EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCC--CcEEEEEecCCCCEEEEEecccccccc------
Confidence            3789999999999999887532     223456789999999975  3444  467899999999998865321      


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEE-EEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccccee
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFV-TCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLL  152 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~la-s~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll  152 (174)
                      ...+.. .+..+.|+|.+..+++ +|+.||+|+|||++                            .         ++++
T Consensus       236 ~~~~~~-~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~----------------------------~---------~~~~  277 (318)
T 4ggc_A          236 AVDAHS-QVCSILWSPHYKELISGHGFAQNQLVIWKYP----------------------------T---------MAKV  277 (318)
T ss_dssp             EEECSS-CEEEEEEETTTTEEEEEECTTTCCEEEEETT----------------------------T---------CCEE
T ss_pred             ccccee-eeeeeeecccccceEEEEEcCCCEEEEEECC----------------------------C---------CcEE
Confidence            124556 8999999997654433 34589999999991                            2         3578


Q ss_pred             eeeeccccceeeeeeCCCCCCC
Q psy6415         153 QEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       153 ~~~~~h~~~V~~l~~spd~~~~  174 (174)
                      .++.+|+.+|++|+||||++-|
T Consensus       278 ~~l~gH~~~V~~l~~spdg~~l  299 (318)
T 4ggc_A          278 AELKGHTSRVLSLTMSPDGATV  299 (318)
T ss_dssp             EEECCCSSCEEEEEECTTSSCE
T ss_pred             EEEcCCCCCEEEEEEcCCCCEE
Confidence            9999999999999999998743

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.80  E-value=6.3e-19  Score=140.12  Aligned_cols=97  Identities=10%  Similarity=0.163  Sum_probs=84.1

Q ss_pred             CEEEEecCCcEEEEECCCCC----eEEEeecCCCEEEEEecCCCCCCC-EEEEEeCCCcEEEEEC-CCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS----LKWETNLKNGVCGVDFDRRDIPMN-KLVATTLEAKLFVFDL-KTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~----~~~~~~~~~~V~sv~f~~~~~~~~-~l~s~s~Dg~I~iWD~-~~~~~~~~~~~~~~   74 (174)
                      +|++|+.||+|+|||++++.    ......|...|.+++|+|++   + .|++|+.|+.|++||+ ++.+.      ..+
T Consensus        25 ~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~~wd~~~~~~~------~~~   95 (342)
T 1yfq_A           25 LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT---DLQIYVGTVQGEILKVDLIGSPSF------QAL   95 (342)
T ss_dssp             EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS---SEEEEEEETTSCEEEECSSSSSSE------EEC
T ss_pred             EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC---CcEEEEEcCCCeEEEEEeccCCce------Eec
Confidence            47999999999999998887    55556678899999999974   8 8999999999999999 77542      344


Q ss_pred             cc--cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 KA--HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ~~--h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+  |.. .|++++|+|  +..|++++.||+|++||+
T Consensus        96 ~~~~~~~-~v~~l~~~~--~~~l~s~~~d~~i~iwd~  129 (342)
T 1yfq_A           96 TNNEANL-GICRICKYG--DDKLIAASWDGLIEVIDP  129 (342)
T ss_dssp             BSCCCCS-CEEEEEEET--TTEEEEEETTSEEEEECH
T ss_pred             cccCCCC-ceEEEEeCC--CCEEEEEcCCCeEEEEcc
Confidence            57  988 999999999  568999999999999999

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.80  E-value=2e-18  Score=137.67  Aligned_cols=125  Identities=14%  Similarity=0.232  Sum_probs=101.6

Q ss_pred             CEEEEecCCcEEEEECCC-CCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKT-MSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~-~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|++|+.||.|++||+++ +...... .+...|.+++|+|++   +.|++++.|+.|++||+++.+...     .+ .+.
T Consensus       189 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~-----~~-~~~  259 (369)
T 3zwl_B          189 YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL---TYFITSSRDTNSFLVDVSTLQVLK-----KY-ETD  259 (369)
T ss_dssp             EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTCCEEE-----EE-ECS
T ss_pred             EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC---CEEEEecCCceEEEEECCCCceee-----ee-cCC
Confidence            378999999999999998 5555444 467889999999974   899999999999999999876432     22 356


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCC--------------cEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSG--------------SLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMG  144 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg--------------~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~  144 (174)
                      . .+.+++|+|+ +..+++++.++              .|++||+                                   
T Consensus       260 ~-~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~-----------------------------------  302 (369)
T 3zwl_B          260 C-PLNTAVITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHK-----------------------------------  302 (369)
T ss_dssp             S-CEEEEEECSS-SSEEEEEECCC-------------CEEEEEET-----------------------------------
T ss_pred             C-CceeEEecCC-CceEEEeecCCCceEEEEecCCCcceeEEEec-----------------------------------
Confidence            6 8999999995 56888899888              6777777                                   


Q ss_pred             cccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         145 VPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       145 ~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                        .+.+.+..+.+|..+|++++|+||++-
T Consensus       303 --~~~~~~~~~~~~~~~v~~~~~s~~~~~  329 (369)
T 3zwl_B          303 --IFEEEIGRVQGHFGPLNTVAISPQGTS  329 (369)
T ss_dssp             --TTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred             --CCCcchhheecccCcEEEEEECCCCCE
Confidence              123467888999999999999999864

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.80  E-value=2.2e-18  Score=152.02  Aligned_cols=161  Identities=9%  Similarity=0.099  Sum_probs=115.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||.|++||+++++...... |...|.+++|+|++   +.|++++.|++|++||+++...    ....+.+|..
T Consensus        69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~vw~~~~~~~----~~~~~~~~~~  141 (814)
T 3mkq_A           69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWA----LEQTFEGHEH  141 (814)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS---SEEEEEETTSEEEEEEGGGTSE----EEEEEECCSS
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC---CEEEEEcCCCEEEEEECCCCce----EEEEEcCCCC
Confidence            38999999999999999998876654 77889999999974   8999999999999999987521    2334568888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEecccccccc---ccc-cceeeeecCC-C--CCCcc--cCCCCCcccc--ccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRAD---TNL-CSIFRYSSNY-P--TQRTK--PDIDDIPMGV--PGS  148 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~---~~~-~~~~~~~~~~-~--~~~~~--~~~dg~~~~~--~~~  148 (174)
                       .|.+++|+|.++..|++++.||+|++||+.+.....   ... ..+  ....+ |  ++..+  ...||. +.+  ..+
T Consensus       142 -~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~  217 (814)
T 3mkq_A          142 -FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV--NYVDYYPLPDKPYMITASDDLT-IKIWDYQT  217 (814)
T ss_dssp             -CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC--CEEEECCSTTCCEEEEECTTSE-EEEEETTT
T ss_pred             -cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE--EEEEEEECCCCCEEEEEeCCCE-EEEEECCC
Confidence             999999999667799999999999999994311100   000 000  01111 1  22222  112331 111  244


Q ss_pred             cceeeeeeccccceeeeeeCCCCC
Q psy6415         149 LTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       149 ~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      .+.+.++.+|..+|.+++|+|+++
T Consensus       218 ~~~~~~~~~~~~~v~~~~~~~~~~  241 (814)
T 3mkq_A          218 KSCVATLEGHMSNVSFAVFHPTLP  241 (814)
T ss_dssp             TEEEEEEECCSSCEEEEEECSSSS
T ss_pred             CcEEEEEcCCCCCEEEEEEcCCCC
Confidence            567888999999999999999985

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.80  E-value=2.9e-18  Score=141.97  Aligned_cols=122  Identities=14%  Similarity=0.167  Sum_probs=100.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ||+| .|++|+|||+.++++.....   |...|++|+|+|++   ++||+|+.|++|+|||+++.++     +..+.+|.
T Consensus       119 lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg---~~lasgs~Dg~v~iWd~~~~~~-----~~~~~~h~  189 (420)
T 4gga_A          119 LAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGTSSAEVQLWDVQQQKR-----LRNMTSHS  189 (420)
T ss_dssp             EEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEE-----EEEECCCS
T ss_pred             EEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC---CEEEEEECCCeEEEEEcCCCcE-----EEEEeCCC
Confidence            5555 58999999999998876543   45679999999974   8999999999999999998654     34556899


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      . .+.++++++   .+|++|+.|++|++||...                                    ....+.++.+|
T Consensus       190 ~-~v~~~s~~~---~~l~sgs~d~~i~~~d~~~------------------------------------~~~~~~~~~~h  229 (420)
T 4gga_A          190 A-RVGSLSWNS---YILSSGSRSGHIHHHDVRV------------------------------------AEHHVATLSGH  229 (420)
T ss_dssp             S-CEEEEEEET---TEEEEEETTSEEEEEETTS------------------------------------SSCEEEEEECC
T ss_pred             C-ceEEEeeCC---CEEEEEeCCCceeEeeecc------------------------------------cceeeEEeccc
Confidence            9 999998875   5899999999999999910                                    01356778899


Q ss_pred             ccceeeeeeCCCCC
Q psy6415         159 SQPINSLDWSADKL  172 (174)
Q Consensus       159 ~~~V~~l~~spd~~  172 (174)
                      ...|..+.|+|+++
T Consensus       230 ~~~~~~~~~~~~g~  243 (420)
T 4gga_A          230 SQEVCGLRWAPDGR  243 (420)
T ss_dssp             SSCEEEEEECTTSS
T ss_pred             ccceeeeeecCCCC
Confidence            99999999999875

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.80  E-value=1.4e-18  Score=140.97  Aligned_cols=124  Identities=16%  Similarity=0.242  Sum_probs=105.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++|+.||.|++||+++++..... .+...|.+++|+|++   +.|++++.|+.|++||+++.+..     ..+..|.. 
T Consensus       220 ~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~-  290 (425)
T 1r5m_A          220 FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN---KLLLSASDDGTLRIWHGGNGNSQ-----NCFYGHSQ-  290 (425)
T ss_dssp             EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT---TEEEEEETTSCEEEECSSSBSCS-----EEECCCSS-
T ss_pred             EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC---CEEEEEcCCCEEEEEECCCCccc-----eEecCCCc-
Confidence            688999999999999998776554 467889999999974   79999999999999999986543     34457888 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+++|+|+ + +|++++.||.|++||+                             .        +++++..+.+|..
T Consensus       291 ~i~~~~~~~~-~-~l~~~~~d~~i~i~d~-----------------------------~--------~~~~~~~~~~~~~  331 (425)
T 1r5m_A          291 SIVSASWVGD-D-KVISCSMDGSVRLWSL-----------------------------K--------QNTLLALSIVDGV  331 (425)
T ss_dssp             CEEEEEEETT-T-EEEEEETTSEEEEEET-----------------------------T--------TTEEEEEEECTTC
T ss_pred             cEEEEEECCC-C-EEEEEeCCCcEEEEEC-----------------------------C--------CCcEeEecccCCc
Confidence            9999999995 4 8999999999999999                             1        1246788889999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|.+++|+||++-
T Consensus       332 ~i~~~~~s~~~~~  344 (425)
T 1r5m_A          332 PIFAGRISQDGQK  344 (425)
T ss_dssp             CEEEEEECTTSSE
T ss_pred             cEEEEEEcCCCCE
Confidence            9999999999863

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.80  E-value=6.7e-19  Score=145.37  Aligned_cols=131  Identities=12%  Similarity=0.144  Sum_probs=97.2

Q ss_pred             CEEEEecCCcEEEEECCC---CC---eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC---Cccccccee-
Q psy6415           1 MVVAGYDNGDLKMFDLKT---MS---LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK---TLHREKGFA-   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~---~~---~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~---~~~~~~~~~-   70 (174)
                      +||+|+.||+|+|||+++   +.   ......|...|.+|+|+|++   +.|++|+.|++|+|||++   +.+...... 
T Consensus        78 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~  154 (437)
T 3gre_A           78 YLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF---DAFAVSSKDGQIIVLKVNHYQQESEVKFLNC  154 (437)
T ss_dssp             EEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS---SEEEEEETTSEEEEEEEEEEEETTEEEEEEE
T ss_pred             EEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC---CEEEEEeCCCEEEEEEeccccCCceeecccc
Confidence            489999999999999976   43   23444678899999999964   899999999999999995   332211111 


Q ss_pred             --eeee--cc--cCcCcEEEEE--EcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415          71 --YLSE--KA--HKATTVWAAK--HLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP  142 (174)
Q Consensus        71 --~~~~--~~--h~~~~i~~v~--fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~  142 (174)
                        +..+  ..  +.. .+.++.  ++| ++.+|++|+.||+|++||++                            .   
T Consensus       155 ~~i~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~----------------------------~---  201 (437)
T 3gre_A          155 ECIRKINLKNFGKNE-YAVRMRAFVNE-EKSLLVALTNLSRVIIFDIR----------------------------T---  201 (437)
T ss_dssp             EEEEEEEGGGGSSCC-CEEEEEEEECS-SCEEEEEEETTSEEEEEETT----------------------------T---
T ss_pred             ceeEEEEccCccccc-CceEEEEEEcC-CCCEEEEEeCCCeEEEEeCC----------------------------C---
Confidence              1111  11  444 666666  556 56799999999999999991                            1   


Q ss_pred             cccccccceeeeeec--cccceeeeeeCCCCCC
Q psy6415         143 MGVPGSLTLLQEATL--SSQPINSLDWSADKLG  173 (174)
Q Consensus       143 ~~~~~~~~ll~~~~~--h~~~V~~l~~spd~~~  173 (174)
                            .+.+.++.+  |..+|++++|+|+++-
T Consensus       202 ------~~~~~~~~~~~h~~~v~~~~~s~~~~~  228 (437)
T 3gre_A          202 ------LERLQIIENSPRHGAVSSICIDEECCV  228 (437)
T ss_dssp             ------CCEEEEEECCGGGCCEEEEEECTTSCE
T ss_pred             ------CeeeEEEccCCCCCceEEEEECCCCCE
Confidence                  246777887  8999999999999753

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.79  E-value=7.1e-19  Score=144.78  Aligned_cols=138  Identities=9%  Similarity=0.202  Sum_probs=96.4

Q ss_pred             CEEEEecCCcEEEEECCCCC-----------eEEE-eecC------------CCEEEEEecCCCCCCCEEEEEeCCCcEE
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-----------LKWE-TNLK------------NGVCGVDFDRRDIPMNKLVATTLEAKLF   56 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-----------~~~~-~~~~------------~~V~sv~f~~~~~~~~~l~s~s~Dg~I~   56 (174)
                      +||+|+.||.|+|||+.++.           +... ..|.            ..|++|+|+|++ +...|++++.|++|+
T Consensus        42 ~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~-~~~~l~s~s~d~~i~  120 (447)
T 3dw8_B           42 LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK-NAAQFLLSTNDKTIK  120 (447)
T ss_dssp             EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC-SSSEEEEEECSSCEE
T ss_pred             EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC-CcceEEEeCCCCeEE
Confidence            48999999999999998776           2323 3455            779999999963 125899999999999


Q ss_pred             EEECCCcccccc-------------------e---------------ee-eeecccCcCcEEEEEEcCCCCCEEEEEcCC
Q psy6415          57 VFDLKTLHREKG-------------------F---------------AY-LSEKAHKATTVWAAKHLPQNRDLFVTCGGS  101 (174)
Q Consensus        57 iWD~~~~~~~~~-------------------~---------------~~-~~~~~h~~~~i~~v~fsP~~~~~las~s~D  101 (174)
                      |||+++......                   +               .. ....+|.. .|++++|+| ++.+||+| .|
T Consensus       121 iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~-~~~~l~s~-~d  197 (447)
T 3dw8_B          121 LWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY-HINSISINS-DYETYLSA-DD  197 (447)
T ss_dssp             EEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS-CCCEEEECT-TSSEEEEE-CS
T ss_pred             EEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc-ceEEEEEcC-CCCEEEEe-CC
Confidence            999986432100                   0               00 11257888 999999999 56789998 79


Q ss_pred             CcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCC
Q psy6415         102 GSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       102 g~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                      |+|++||+++    ..   ..+....                      ....++.+|..+|++++|+|++
T Consensus       198 ~~i~iwd~~~----~~---~~~~~~~----------------------~~~~~~~~~~~~v~~~~~~p~~  238 (447)
T 3dw8_B          198 LRINLWHLEI----TD---RSFNIVD----------------------IKPANMEELTEVITAAEFHPNS  238 (447)
T ss_dssp             SEEEEEETTE----EE---EEEEEEE----------------------CCCSSGGGCCCCEEEEEECSSC
T ss_pred             CeEEEEECCC----CC---ceeeeee----------------------cccccccccCcceEEEEECCCC
Confidence            9999999911    00   0000000                      0012567999999999999997

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.79  E-value=1.4e-18  Score=145.06  Aligned_cols=129  Identities=8%  Similarity=0.120  Sum_probs=102.9

Q ss_pred             EEEEecCCcEEEEECC--CCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLK--TMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~--~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|+|+.||+|+|||++  ++.+....   .+...|++++|+|++   +.|++|+.|+.|++||+.+...... ....+.+
T Consensus       118 ~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~l~~~~~~g~v~~~~~~~~~~~~~-~~~~~~~  193 (450)
T 2vdu_B          118 IACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD---TTVIIADKFGDVYSIDINSIPEEKF-TQEPILG  193 (450)
T ss_dssp             EEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS---SEEEEEETTSEEEEEETTSCCCSSC-CCCCSEE
T ss_pred             EEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC---CEEEEEeCCCcEEEEecCCcccccc-cceeeec
Confidence            4899999999999998  77766554   456889999999974   8999999999999999987654320 1224458


Q ss_pred             cCcCcEEEEEEcCC--CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          77 HKATTVWAAKHLPQ--NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        77 h~~~~i~~v~fsP~--~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                      |.. .|++++|+|+  ++.+|++|+.|++|++||+.                            .         ++.+..
T Consensus       194 h~~-~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~----------------------------~---------~~~~~~  235 (450)
T 2vdu_B          194 HVS-MLTDVHLIKDSDGHQFIITSDRDEHIKISHYP----------------------------Q---------CFIVDK  235 (450)
T ss_dssp             CSS-CEEEEEEEECTTSCEEEEEEETTSCEEEEEES----------------------------C---------TTCEEE
T ss_pred             ccC-ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC----------------------------C---------Cceeee
Confidence            888 9999999994  16689999999999999991                            1         124444


Q ss_pred             -eeccccceeeeeeCCCCCC
Q psy6415         155 -ATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       155 -~~~h~~~V~~l~~spd~~~  173 (174)
                       +.+|..+|++++|| |++-
T Consensus       236 ~~~~h~~~v~~~~~s-d~~~  254 (450)
T 2vdu_B          236 WLFGHKHFVSSICCG-KDYL  254 (450)
T ss_dssp             ECCCCSSCEEEEEEC-STTE
T ss_pred             eecCCCCceEEEEEC-CCCE
Confidence             56899999999999 8753

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.79  E-value=1.3e-18  Score=154.91  Aligned_cols=132  Identities=17%  Similarity=0.210  Sum_probs=105.6

Q ss_pred             CEEEEecCCcEEEEECCCCC--eEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS--LKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~--~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +|++|+.||+|++||++++.  .... ..|...|.+++|+|+. .++.|++|+.||+|++||+++.....   ...+.+|
T Consensus        69 ~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~~l~sgs~dg~I~vwdl~~~~~~~---~~~~~~~  144 (753)
T 3jro_A           69 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHE-YGPLLLVASSDGKVSVVEFKENGTTS---PIIIDAH  144 (753)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTSEEEEEECCSSSCCC---CEEEECC
T ss_pred             EEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCC-CCCEEEEEeCCCcEEEEEeecCCCcc---eeEeecC
Confidence            38999999999999999886  3333 3467889999999961 13899999999999999999864332   2244588


Q ss_pred             CcCcEEEEEEcCC------------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          78 KATTVWAAKHLPQ------------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        78 ~~~~i~~v~fsP~------------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                      .. .|.+++|+|.            ++.+|++|+.||+|++||+.                            .+.    
T Consensus       145 ~~-~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~----------------------------~~~----  191 (753)
T 3jro_A          145 AI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN----------------------------SDA----  191 (753)
T ss_dssp             SS-CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE----------------------------TTT----
T ss_pred             CC-ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc----------------------------CCc----
Confidence            88 9999999995            46789999999999999991                            110    


Q ss_pred             ccccceeeeeeccccceeeeeeCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSAD  170 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd  170 (174)
                       ...+++.++.+|..+|++++|+|+
T Consensus       192 -~~~~~~~~~~~h~~~V~~l~~sp~  215 (753)
T 3jro_A          192 -QTYVLESTLEGHSDWVRDVAWSPT  215 (753)
T ss_dssp             -TEEEEEEEECCCSSCEEEEEECCC
T ss_pred             -ccceeeeeecCCCCcEEEEEeccC
Confidence             122467888999999999999999

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.79  E-value=1.6e-18  Score=140.70  Aligned_cols=130  Identities=17%  Similarity=0.143  Sum_probs=99.9

Q ss_pred             CEEEEecCCcEEEEECCCCCe-----EEEe-ec-----CCCEEEEEec----CCCCCCCE-EEEEeCCCcEEEEECCC--
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL-----KWET-NL-----KNGVCGVDFD----RRDIPMNK-LVATTLEAKLFVFDLKT--   62 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~-----~~~~-~~-----~~~V~sv~f~----~~~~~~~~-l~s~s~Dg~I~iWD~~~--   62 (174)
                      +|++|+.||+|++||+++++.     .... .+     ...|.+++|+    |++   +. |++++.|+.|++||+++  
T Consensus        83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~  159 (397)
T 1sq9_A           83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL---SHRLVATDVKGTTYIWKFHPFA  159 (397)
T ss_dssp             EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-------CEEEEEEETTSCEEEEEEESSS
T ss_pred             EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC---ceEEEEEeCCCcEEEEeCCccc
Confidence            479999999999999988874     4443 34     3889999999    864   88 99999999999999998  


Q ss_pred             ----cccccceeeeee-------cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCC
Q psy6415          63 ----LHREKGFAYLSE-------KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPT  131 (174)
Q Consensus        63 ----~~~~~~~~~~~~-------~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~  131 (174)
                          .+...-.....+       ..|.. .|++++|+|+ + +|++++.||.|++||++                     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~-~-~l~~~~~dg~i~i~d~~---------------------  215 (397)
T 1sq9_A          160 DESNSLTLNWSPTLELQGTVESPMTPSQ-FATSVDISER-G-LIATGFNNGTVQISELS---------------------  215 (397)
T ss_dssp             SHHHHTTTCCCCEEEEEEEECCSSSSCC-CCCEEEECTT-S-EEEEECTTSEEEEEETT---------------------
T ss_pred             cccccceeeccCcceeeeeeccccCCCC-CceEEEECCC-c-eEEEEeCCCcEEEEECC---------------------
Confidence                554331011123       34777 9999999995 5 99999999999999991                     


Q ss_pred             CCcccCCCCCccccccccceeeeeec---c---ccceeeeeeCCCCCC
Q psy6415         132 QRTKPDIDDIPMGVPGSLTLLQEATL---S---SQPINSLDWSADKLG  173 (174)
Q Consensus       132 ~~~~~~~dg~~~~~~~~~~ll~~~~~---h---~~~V~~l~~spd~~~  173 (174)
                             .         .+.+..+.+   |   ..+|.+++|+|+++-
T Consensus       216 -------~---------~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~  247 (397)
T 1sq9_A          216 -------T---------LRPLYNFESQHSMINNSNSIRSVKFSPQGSL  247 (397)
T ss_dssp             -------T---------TEEEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred             -------C---------CceeEEEeccccccccCCccceEEECCCCCE
Confidence                   1         246777778   9   999999999999863

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.79  E-value=2e-18  Score=137.50  Aligned_cols=130  Identities=13%  Similarity=0.188  Sum_probs=97.5

Q ss_pred             CEEEEecCCcEEEEECCCCC-eEEEee-c----CCCEEEEE----ecCCCCCCCEEEEEeCCCcEEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-LKWETN-L----KNGVCGVD----FDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-~~~~~~-~----~~~V~sv~----f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~   70 (174)
                      +|++|+.||+|++||++++. ...... +    ...|.+++    |+|+   ++.|++++.|+.|++||+++.+..    
T Consensus       131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~----  203 (357)
T 3i2n_A          131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE---ERVVCAGYDNGDIKLFDLRNMALR----  203 (357)
T ss_dssp             EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C---CCEEEEEETTSEEEEEETTTTEEE----
T ss_pred             EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC---CCEEEEEccCCeEEEEECccCcee----
Confidence            37999999999999999876 444332 2    23789998    6775   489999999999999999986532    


Q ss_pred             eeeecccCcCcEEEEEEcCC--CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccc
Q psy6415          71 YLSEKAHKATTVWAAKHLPQ--NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGS  148 (174)
Q Consensus        71 ~~~~~~h~~~~i~~v~fsP~--~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~  148 (174)
                        ....|.. .|.+++|+|.  ++..|++|+.||.|++||+++                            +.+.   ..
T Consensus       204 --~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~----------------------------~~~~---~~  249 (357)
T 3i2n_A          204 --WETNIKN-GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT----------------------------QHPT---KG  249 (357)
T ss_dssp             --EEEECSS-CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE----------------------------EETT---TE
T ss_pred             --eecCCCC-ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC----------------------------CCcc---cc
Confidence              2246778 9999999994  456899999999999999911                            0000   00


Q ss_pred             cceeeeeeccccceeeeeeCCCCC
Q psy6415         149 LTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       149 ~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                       -....+.+|..+|++++|+|+++
T Consensus       250 -~~~~~~~~~~~~v~~~~~~~~~~  272 (357)
T 3i2n_A          250 -FASVSEKAHKSTVWQVRHLPQNR  272 (357)
T ss_dssp             -EEEEEEECCSSCEEEEEEETTEE
T ss_pred             -eeeeccCCCcCCEEEEEECCCCC
Confidence             01235569999999999999975

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.78  E-value=2.4e-18  Score=149.31  Aligned_cols=102  Identities=12%  Similarity=0.117  Sum_probs=79.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCC-----CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccc-c-eeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN-----GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREK-G-FAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~-----~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~-~-~~~~~   73 (174)
                      +||+++.||+|+|||.++  +.....+..     .|.+++|||++   +.||+|+.||+|+|||++++.... . ..+.+
T Consensus        99 ~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG---~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~t  173 (588)
T 2j04_A           99 WMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIE---SSIVVGNEDGELQFFSIRKNSENTPEFYFESS  173 (588)
T ss_dssp             CEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSS---SCEEEEETTSEEEEEECCCCTTTCCCCEEEEE
T ss_pred             EEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCC---CEEEEEcCCCEEEEEECCCCccccccceeeee
Confidence            489999999999999654  433333332     59999999975   999999999999999999864200 0 11234


Q ss_pred             e----cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          74 E----KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        74 ~----~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      +    .+|.. .|.+|+|+|+ +  +|+++.|++|++||+..
T Consensus       174 i~~~~~gh~~-~V~sVawSPd-g--Laass~D~tVrlWd~~~  211 (588)
T 2j04_A          174 IRLSDAGSKD-WVTHIVWYED-V--LVAALSNNSVFSMTVSA  211 (588)
T ss_dssp             EECSCTTCCC-CEEEEEEETT-E--EEEEETTCCEEEECCCS
T ss_pred             eecccccccc-cEEEEEEcCC-c--EEEEeCCCeEEEEECCC
Confidence            3    57888 9999999995 4  78899999999999944

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.78  E-value=1.1e-17  Score=138.98  Aligned_cols=97  Identities=16%  Similarity=0.264  Sum_probs=79.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeE------------------------EEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEE
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK------------------------WETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLF   56 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~------------------------~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~   56 (174)
                      +|++|+.||+|++||++++...                        ....|...|.+++.+.     +.|++|+.|++|+
T Consensus       219 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d~~i~  293 (464)
T 3v7d_B          219 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG-----NIVVSGSYDNTLI  293 (464)
T ss_dssp             EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEET-----TEEEEEETTSCEE
T ss_pred             EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCC-----CEEEEEeCCCeEE
Confidence            3899999999999999877532                        1233566788876543     8999999999999


Q ss_pred             EEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          57 VFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        57 iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +||+++.++     ...+.+|.. .|++++|+| ++..|++|+.||+|++||+
T Consensus       294 vwd~~~~~~-----~~~~~~~~~-~v~~~~~~~-~~~~l~sg~~dg~i~vwd~  339 (464)
T 3v7d_B          294 VWDVAQMKC-----LYILSGHTD-RIYSTIYDH-ERKRCISASMDTTIRIWDL  339 (464)
T ss_dssp             EEETTTTEE-----EEEECCCSS-CEEEEEEET-TTTEEEEEETTSCEEEEET
T ss_pred             EEECCCCcE-----EEEecCCCC-CEEEEEEcC-CCCEEEEEeCCCcEEEEEC
Confidence            999998654     344568988 999999999 5678999999999999999

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.78  E-value=3.6e-18  Score=152.00  Aligned_cols=139  Identities=11%  Similarity=0.125  Sum_probs=105.0

Q ss_pred             CEEEEecCCcEEEEECCCCCe---EEEeecCCCEEEEEecCCCC----------CCCEEEEEeCCCcEEEEECCCccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSL---KWETNLKNGVCGVDFDRRDI----------PMNKLVATTLEAKLFVFDLKTLHREK   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~---~~~~~~~~~V~sv~f~~~~~----------~~~~l~s~s~Dg~I~iWD~~~~~~~~   67 (174)
                      +|++|+.||+|++||++++..   .....+...|.+++|+|...          +++.|++|+.||+|++||+++.....
T Consensus       115 ~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~  194 (753)
T 3jro_A          115 LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY  194 (753)
T ss_dssp             EEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE
T ss_pred             EEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc
Confidence            379999999999999988732   23345778899999999400          14789999999999999999764321


Q ss_pred             ceeeeeecccCcCcEEEEEEcCCC--CCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          68 GFAYLSEKAHKATTVWAAKHLPQN--RDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        68 ~~~~~~~~~h~~~~i~~v~fsP~~--~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                       .....+.+|.. .|++++|+|++  +.+|++|+.||+|++||+.+    .                      .+.    
T Consensus       195 -~~~~~~~~h~~-~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~----~----------------------~~~----  242 (753)
T 3jro_A          195 -VLESTLEGHSD-WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN----E----------------------QGP----  242 (753)
T ss_dssp             -EEEEEECCCSS-CEEEEEECCCCSSSEEEEEEESSSCEEEEEESS----S----------------------SSC----
T ss_pred             -eeeeeecCCCC-cEEEEEeccCCCCCCEEEEEecCCEEEEecCCC----C----------------------CCc----
Confidence             12345678999 99999999963  77999999999999999911    0                      000    


Q ss_pred             ccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                        ....+....+|..+|++++|+||++-
T Consensus       243 --~~~~~~~~~~~~~~v~~l~~spdg~~  268 (753)
T 3jro_A          243 --WKKTLLKEEKFPDVLWRASWSLSGNV  268 (753)
T ss_dssp             --CBCCBSSSSCCSSCCCCEEECTTTCC
T ss_pred             --ceeEEeccCCCCCceEEEEEcCCCCE
Confidence              01134455678899999999999864

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.77  E-value=1e-18  Score=161.14  Aligned_cols=98  Identities=14%  Similarity=0.250  Sum_probs=83.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++++.||+|++||+.++++..... |...|.+++|+|++   +.|++++.|++|++||+++.++.     ..+.+|.. 
T Consensus      1058 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~---~~l~s~s~d~~v~iwd~~~~~~~-----~~l~~h~~- 1128 (1249)
T 3sfz_A         1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDA---TKFSSTSADKTAKIWSFDLLSPL-----HELKGHNG- 1128 (1249)
T ss_dssp             EEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSS---SSCEEECCSSCCCEECSSSSSCS-----BCCCCCSS-
T ss_pred             EEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCC---CEEEEEcCCCcEEEEECCCccee-----eeeccCCC-
Confidence            5778888888888888887665543 67789999999974   88999999999999999987644     34468998 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|++++|+| ++.+||+|+.||+|++||+
T Consensus      1129 ~v~~~~~s~-dg~~lat~~~dg~i~vwd~ 1156 (1249)
T 3sfz_A         1129 CVRCSAFSL-DGILLATGDDNGEIRIWNV 1156 (1249)
T ss_dssp             CEEEEEECS-SSSEEEEEETTSCCCEEES
T ss_pred             cEEEEEECC-CCCEEEEEeCCCEEEEEEC
Confidence            999999999 5679999999999999999

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.77  E-value=7.2e-18  Score=133.97  Aligned_cols=123  Identities=14%  Similarity=0.247  Sum_probs=98.4

Q ss_pred             EEEEecCCcEEEEECCC-CCeE---EEeecCCCEEEEEecC-CCCCCCEEEEEeCCCcEEEEECCCc------cccccee
Q psy6415           2 VVAGYDNGDLKMFDLKT-MSLK---WETNLKNGVCGVDFDR-RDIPMNKLVATTLEAKLFVFDLKTL------HREKGFA   70 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~-~~~~---~~~~~~~~V~sv~f~~-~~~~~~~l~s~s~Dg~I~iWD~~~~------~~~~~~~   70 (174)
                      |++|+.||.|++||+++ +...   ....+...|.+++|+| ++   +.|++++.||.|+|||++..      +..    
T Consensus       163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~---~~l~~~~~dg~i~i~~~~~~~~~~~~~~~----  235 (342)
T 1yfq_A          163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ---EGYACSSIDGRVAVEFFDDQGDDYNSSKR----  235 (342)
T ss_dssp             EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG---CEEEEEETTSEEEEEECCTTCCSTTCTTC----
T ss_pred             EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC---CEEEEEecCCcEEEEEEcCCCcccccccc----
Confidence            68999999999999998 5432   2334677899999999 74   89999999999999999875      322    


Q ss_pred             eeeeccc---------CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCC
Q psy6415          71 YLSEKAH---------KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDI  141 (174)
Q Consensus        71 ~~~~~~h---------~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~  141 (174)
                       ..+..|         .. .|++++|+|+ +.+||+|+.||+|++||++                            +  
T Consensus       236 -~~~~~~~~~~~~~~~~~-~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~----------------------------~--  282 (342)
T 1yfq_A          236 -FAFRCHRLNLKDTNLAY-PVNSIEFSPR-HKFLYTAGSDGIISCWNLQ----------------------------T--  282 (342)
T ss_dssp             -EEEECCCCCTTCCSSCC-CEEEEEECTT-TCCEEEEETTSCEEEEETT----------------------------T--
T ss_pred             -eeeecccccccccccce-eEEEEEEcCC-CCEEEEecCCceEEEEcCc----------------------------c--
Confidence             223333         55 8999999994 5688999999999999991                            1  


Q ss_pred             ccccccccceeeeeecc-ccceeeeeeCCCCCC
Q psy6415         142 PMGVPGSLTLLQEATLS-SQPINSLDWSADKLG  173 (174)
Q Consensus       142 ~~~~~~~~~ll~~~~~h-~~~V~~l~~spd~~~  173 (174)
                             ++++.++.+| ..+|++++  ||++-
T Consensus       283 -------~~~~~~~~~~h~~~v~~~~--~~~~~  306 (342)
T 1yfq_A          283 -------RKKIKNFAKFNEDSVVKIA--CSDNI  306 (342)
T ss_dssp             -------TEEEEECCCCSSSEEEEEE--ECSSE
T ss_pred             -------HhHhhhhhcccCCCceEec--CCCCe
Confidence                   3567888898 99999999  88753

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.77  E-value=1.2e-17  Score=138.65  Aligned_cols=126  Identities=17%  Similarity=0.307  Sum_probs=99.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||++++++..... |...|.+++|++     +.|++|+.|++|++||+++.++     ..++.+|..
T Consensus       268 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~h~~  337 (435)
T 1p22_A          268 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD-----RLVVSGSSDNTIRLWDIECGAC-----LRVLEGHEE  337 (435)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET-----TEEEEEETTSCEEEEETTTCCE-----EEEECCCSS
T ss_pred             EEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC-----CEEEEEeCCCeEEEEECCCCCE-----EEEEeCCcC
Confidence            37899999999999999998876654 678899999974     7899999999999999998654     345568998


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.+++|.   +..|++|+.||+|++||+.+...               +        .     .......+.++.+|.
T Consensus       338 -~v~~~~~~---~~~l~sg~~dg~i~vwd~~~~~~---------------~--------~-----~~~~~~~~~~~~~h~  385 (435)
T 1p22_A          338 -LVRCIRFD---NKRIVSGAYDGKIKVWDLVAALD---------------P--------R-----APAGTLCLRTLVEHS  385 (435)
T ss_dssp             -CEEEEECC---SSEEEEEETTSCEEEEEHHHHTS---------------T--------T-----SCTTTTEEEEECCCS
T ss_pred             -cEEEEEec---CCEEEEEeCCCcEEEEECCCCCC---------------c--------c-----ccccchheeeccCCC
Confidence             99999993   46899999999999999921000               0        0     000112578889999


Q ss_pred             cceeeeeeC
Q psy6415         160 QPINSLDWS  168 (174)
Q Consensus       160 ~~V~~l~~s  168 (174)
                      .+|.+++|+
T Consensus       386 ~~v~~l~~~  394 (435)
T 1p22_A          386 GRVFRLQFD  394 (435)
T ss_dssp             SCCCCEEEC
T ss_pred             CCeEEEEeC
Confidence            999999994

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.77  E-value=1.2e-17  Score=130.79  Aligned_cols=123  Identities=10%  Similarity=0.088  Sum_probs=99.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||+|+.||.|++||++++..... ..+...|.+++|+|++   +.|++++.|+.|++||+.......  ....+.+|..
T Consensus        31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~~~~~~~~~~~--~~~~~~~~~~  105 (313)
T 3odt_A           31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK---ELLLFGGKDTMINGVPLFATSGED--PLYTLIGHQG  105 (313)
T ss_dssp             EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTT---TEEEEEETTSCEEEEETTCCTTSC--C-CEECCCSS
T ss_pred             EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCC---CEEEEecCCCeEEEEEeeecCCCC--cccchhhccc
Confidence            389999999999999988876654 3467889999999974   899999999999999998753221  2345568998


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|.+++|.   +..|++++.||+|++||.                                       .+.+..+.+|.
T Consensus       106 -~i~~~~~~---~~~l~~~~~d~~i~~~d~---------------------------------------~~~~~~~~~~~  142 (313)
T 3odt_A          106 -NVCSLSFQ---DGVVISGSWDKTAKVWKE---------------------------------------GSLVYNLQAHN  142 (313)
T ss_dssp             -CEEEEEEE---TTEEEEEETTSEEEEEET---------------------------------------TEEEEEEECCS
T ss_pred             -CEEEEEec---CCEEEEEeCCCCEEEEcC---------------------------------------CcEEEecccCC
Confidence             99999994   358999999999999997                                       13466777888


Q ss_pred             cceeeeeeCC-CC
Q psy6415         160 QPINSLDWSA-DK  171 (174)
Q Consensus       160 ~~V~~l~~sp-d~  171 (174)
                      .+|.++.|+| ++
T Consensus       143 ~~v~~~~~~~~~~  155 (313)
T 3odt_A          143 ASVWDAKVVSFSE  155 (313)
T ss_dssp             SCEEEEEEEETTT
T ss_pred             CceeEEEEccCCC
Confidence            8888888887 44

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.76  E-value=1.7e-17  Score=137.72  Aligned_cols=124  Identities=19%  Similarity=0.305  Sum_probs=97.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .|++|+.||+|++||++++++.... .+...+.++++++     +.|++|+.||.|++||+++.++...+.  ....|..
T Consensus       291 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~  363 (445)
T 2ovr_B          291 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-----NILVSGNADSTVKIWDIKTGQCLQTLQ--GPNKHQS  363 (445)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-----TEEEEEETTSCEEEEETTTCCEEEEEC--STTSCSS
T ss_pred             EEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC-----CEEEEEeCCCeEEEEECCCCcEEEEEc--cCCCCCC
Confidence            3789999999999999999887654 3567788888874     789999999999999998876432221  1123778


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee----
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA----  155 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~----  155 (174)
                       .|.+++|+|   .+|++|+.||+|++||++                            +|         +++.++    
T Consensus       364 -~v~~~~~~~---~~l~s~~~dg~v~iwd~~----------------------------~~---------~~~~~~~~~~  402 (445)
T 2ovr_B          364 -AVTCLQFNK---NFVITSSDDGTVKLWDLK----------------------------TG---------EFIRNLVTLE  402 (445)
T ss_dssp             -CEEEEEECS---SEEEEEETTSEEEEEETT----------------------------TC---------CEEEEEEECT
T ss_pred             -CEEEEEECC---CEEEEEeCCCeEEEEECC----------------------------CC---------ceeeeeeccc
Confidence             999999975   589999999999999991                            22         234444    


Q ss_pred             -eccccceeeeeeCCCCC
Q psy6415         156 -TLSSQPINSLDWSADKL  172 (174)
Q Consensus       156 -~~h~~~V~~l~~spd~~  172 (174)
                       .+|..+|++++|||++.
T Consensus       403 ~~~~~~~v~~~~~s~~~~  420 (445)
T 2ovr_B          403 SGGSGGVVWRIRASNTKL  420 (445)
T ss_dssp             TGGGTCEEEEEEECSSEE
T ss_pred             cCCCCceEEEEEecCCEE
Confidence             57889999999999864

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.76  E-value=2.4e-17  Score=136.87  Aligned_cols=156  Identities=17%  Similarity=0.165  Sum_probs=109.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||++++++.... .|...|.+++|++     +.|++|+.|++|++||+++.++     ..++.+|..
T Consensus       131 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-----~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~h~~  200 (445)
T 2ovr_B          131 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-----NIIISGSTDRTLKVWNAETGEC-----IHTLYGHTS  200 (445)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET-----TEEEEEETTSCEEEEETTTTEE-----EEEECCCSS
T ss_pred             EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC-----CEEEEEeCCCeEEEEECCcCcE-----EEEECCCCC
Confidence            3799999999999999999887664 4778899999985     7899999999999999998654     345568999


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccceeeeecCC-CCCCcccCCCCCcc-ccccccceeeeee
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCSIFRYSSNY-PTQRTKPDIDDIPM-GVPGSLTLLQEAT  156 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dg~~~-~~~~~~~ll~~~~  156 (174)
                       .|.+++|++   ..|++|+.||+|++||+++...... ..+........+ +........||... -...+.+.+.++.
T Consensus       201 -~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  276 (445)
T 2ovr_B          201 -TVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ  276 (445)
T ss_dssp             -CEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred             -cEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEec
Confidence             999999975   4799999999999999943111000 000000011111 11111122344221 1135668899999


Q ss_pred             ccccceeeeeeCCCCC
Q psy6415         157 LSSQPINSLDWSADKL  172 (174)
Q Consensus       157 ~h~~~V~~l~~spd~~  172 (174)
                      +|..+|.+++|  |+.
T Consensus       277 ~~~~~v~~~~~--~~~  290 (445)
T 2ovr_B          277 GHTNRVYSLQF--DGI  290 (445)
T ss_dssp             CCSSCEEEEEE--CSS
T ss_pred             CCCCceEEEEE--CCC
Confidence            99999999998  654

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.76  E-value=3.4e-17  Score=135.92  Aligned_cols=157  Identities=12%  Similarity=0.136  Sum_probs=108.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||++++++.... .|...|.+++|++     +.|++|+.|++|++||+++.....  ....+.+|..
T Consensus       185 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~vwd~~~~~~~~--~~~~~~~~~~  257 (435)
T 1p22_A          185 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-----GMMVTCSKDRSIAVWDMASPTDIT--LRRVLVGHRA  257 (435)
T ss_dssp             EEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT-----TEEEEEETTSCEEEEECSSSSCCE--EEEEECCCSS
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC-----CEEEEeeCCCcEEEEeCCCCCCce--eeeEecCCCC
Confidence            4789999999999999999877654 4667899999985     689999999999999998865431  1234568988


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-cccceeeeecCC-CCCCcccCCCCCcc-ccccccceeeeee
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLCSIFRYSSNY-PTQRTKPDIDDIPM-GVPGSLTLLQEAT  156 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dg~~~-~~~~~~~ll~~~~  156 (174)
                       .|.+++|.   +..|++|+.||+|++||+++...... ..+........+ +........||... -...+++.+.++.
T Consensus       258 -~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  333 (435)
T 1p22_A          258 -AVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE  333 (435)
T ss_dssp             -CEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             -cEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEe
Confidence             99999993   46899999999999999944111000 000000001111 10011122444221 1146678999999


Q ss_pred             ccccceeeeeeC
Q psy6415         157 LSSQPINSLDWS  168 (174)
Q Consensus       157 ~h~~~V~~l~~s  168 (174)
                      +|..+|.+++|+
T Consensus       334 ~h~~~v~~~~~~  345 (435)
T 1p22_A          334 GHEELVRCIRFD  345 (435)
T ss_dssp             CCSSCEEEEECC
T ss_pred             CCcCcEEEEEec
Confidence            999999999994

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.76  E-value=9.1e-18  Score=140.09  Aligned_cols=102  Identities=12%  Similarity=0.104  Sum_probs=83.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE-----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW-----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~-----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      +|++|+.||.|++||+.++....     ...|...|++|+|+|+...+++|++|+.|++|+|||+++.++...    .+.
T Consensus       163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~----~~~  238 (450)
T 2vdu_B          163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK----WLF  238 (450)
T ss_dssp             EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE----ECC
T ss_pred             EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee----eec
Confidence            37899999999999998776432     234678899999999600137899999999999999998654322    134


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|.. .|++++|+  ++.+|++|+.|++|++||+
T Consensus       239 ~h~~-~v~~~~~s--d~~~l~s~~~d~~v~vwd~  269 (450)
T 2vdu_B          239 GHKH-FVSSICCG--KDYLLLSAGGDDKIFAWDW  269 (450)
T ss_dssp             CCSS-CEEEEEEC--STTEEEEEESSSEEEEEET
T ss_pred             CCCC-ceEEEEEC--CCCEEEEEeCCCeEEEEEC
Confidence            8988 99999999  5679999999999999999

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.75  E-value=1.2e-18  Score=146.50  Aligned_cols=97  Identities=8%  Similarity=0.070  Sum_probs=78.4

Q ss_pred             EEecCCcEEEEECCCC--------CeE---EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee
Q psy6415           4 AGYDNGDLKMFDLKTM--------SLK---WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY   71 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~--------~~~---~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~   71 (174)
                      +|+.|++|+|||++++        +..   .. ..|...|.+|+|+|+.  ++.|++++.||+|+|||+++....     
T Consensus       113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~--~~~las~s~Dg~v~iwD~~~~~~~-----  185 (434)
T 2oit_A          113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV--PSMVAVCLADGSIAVLQVTETVKV-----  185 (434)
T ss_dssp             ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC--TTEEEEEETTSCEEEEEESSSEEE-----
T ss_pred             ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC--CCEEEEEECCCeEEEEEcCCCcce-----
Confidence            7889999999998754        111   11 2367789999999963  488999999999999999986422     


Q ss_pred             eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ....+|.. .|++++|+|+ +.+||+|+.||+|++||+
T Consensus       186 ~~~~~~~~-~v~~v~wspd-g~~lasgs~dg~v~iwd~  221 (434)
T 2oit_A          186 CATLPSTV-AVTSVCWSPK-GKQLAVGKQNGTVVQYLP  221 (434)
T ss_dssp             EEEECGGG-CEEEEEECTT-SSCEEEEETTSCEEEECT
T ss_pred             eeccCCCC-ceeEEEEcCC-CCEEEEEcCCCcEEEEcc
Confidence            22346888 9999999995 678999999999999999

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.75  E-value=8.9e-18  Score=142.98  Aligned_cols=124  Identities=14%  Similarity=0.191  Sum_probs=101.5

Q ss_pred             CEEEEecCCcEEEEECCCC--------CeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCC----CcEEEEECCCccccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTM--------SLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLE----AKLFVFDLKTLHREK   67 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~--------~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~D----g~I~iWD~~~~~~~~   67 (174)
                      +||+|+.||+|++||+.++        .+.... .+...|.+++|+|++   +.|++++.|    +.|++||...     
T Consensus        80 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~~~~~~~~v~~~d~~~-----  151 (615)
T 1pgu_A           80 YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG---RRLCVVGEGRDNFGVFISWDSGN-----  151 (615)
T ss_dssp             EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS---SEEEEEECCSSCSEEEEETTTCC-----
T ss_pred             EEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCC---CEEEEeccCCCCccEEEEEECCC-----
Confidence            4899999999999999755        333333 367889999999974   899999988    7999999432     


Q ss_pred             ceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415          68 GFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG  147 (174)
Q Consensus        68 ~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~  147 (174)
                        ....+.+|.. .|++++|+|++..+|++++.||+|++||+                             .        
T Consensus       152 --~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~v~vwd~-----------------------------~--------  191 (615)
T 1pgu_A          152 --SLGEVSGHSQ-RINACHLKQSRPMRSMTVGDDGSVVFYQG-----------------------------P--------  191 (615)
T ss_dssp             --EEEECCSCSS-CEEEEEECSSSSCEEEEEETTTEEEEEET-----------------------------T--------
T ss_pred             --cceeeecCCc-cEEEEEECCCCCcEEEEEeCCCcEEEEeC-----------------------------C--------
Confidence              2345568999 99999999976558999999999999999                             1        


Q ss_pred             ccceeeeeecccc---ceeeeeeCCC-CC
Q psy6415         148 SLTLLQEATLSSQ---PINSLDWSAD-KL  172 (174)
Q Consensus       148 ~~~ll~~~~~h~~---~V~~l~~spd-~~  172 (174)
                      +.+++.++.+|..   +|++++|+|+ ++
T Consensus       192 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  220 (615)
T 1pgu_A          192 PFKFSASDRTHHKQGSFVRDVEFSPDSGE  220 (615)
T ss_dssp             TBEEEEEECSSSCTTCCEEEEEECSTTCC
T ss_pred             CcceeeeecccCCCCceEEEEEECCCCCC
Confidence            1356888899999   9999999999 75

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.75  E-value=2.6e-17  Score=133.64  Aligned_cols=99  Identities=13%  Similarity=0.183  Sum_probs=81.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      ++++++.|++|++||++++++.....++..+.+++|+|++   +.| ++++.|++|++||+++.+...     .+ .+..
T Consensus         4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~d~~i~v~d~~~~~~~~-----~~-~~~~   74 (391)
T 1l0q_A            4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDG---TKVYVANAHSNDVSIIDTATNNVIA-----TV-PAGS   74 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS---SEEEEEEGGGTEEEEEETTTTEEEE-----EE-ECSS
T ss_pred             EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCC---CEEEEECCCCCeEEEEECCCCeEEE-----EE-ECCC
Confidence            4789999999999999999888777777789999999974   665 678899999999998865432     23 2334


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       .+.+++|+|++..++++++.|++|++||+
T Consensus        75 -~v~~~~~spdg~~l~~~~~~~~~v~v~d~  103 (391)
T 1l0q_A           75 -SPQGVAVSPDGKQVYVTNMASSTLSVIDT  103 (391)
T ss_dssp             -SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             -CccceEECCCCCEEEEEECCCCEEEEEEC
Confidence             79999999976656678888899999999

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.74  E-value=3.8e-18  Score=147.98  Aligned_cols=101  Identities=12%  Similarity=0.073  Sum_probs=76.2

Q ss_pred             cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc----CcEEEEEEcCCCCCEEEEEcCCC
Q psy6415          27 LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA----TTVWAAKHLPQNRDLFVTCGGSG  102 (174)
Q Consensus        27 ~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~----~~i~~v~fsP~~~~~las~s~Dg  102 (174)
                      +...|.+++|+|++   ..||+++.||+|+|||.++       .+..+. |..    ..|.+++||| ++++||+|+.||
T Consensus        84 ~~~~V~~vawSPdG---~~LAs~s~dg~V~iwd~~~-------~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DG  151 (588)
T 2j04_A           84 PVCYPRVCKPSPID---DWMAVLSNNGNVSVFKDNK-------MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDG  151 (588)
T ss_dssp             CSCCEEEEEECSSS---SCEEEEETTSCEEEEETTE-------EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTS
T ss_pred             CCCcEEEEEECCCC---CEEEEEeCCCcEEEEeCCc-------eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCC
Confidence            34669999999975   8999999999999999654       123334 443    1499999999 567899999999


Q ss_pred             cEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccc--eeeee----eccccceeeeeeCCCC
Q psy6415         103 SLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLT--LLQEA----TLSSQPINSLDWSADK  171 (174)
Q Consensus       103 ~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~--ll~~~----~~h~~~V~~l~~spd~  171 (174)
                      +|+|||++                            +|..    ...+  ++.++    .||..+|.+++|||||
T Consensus       152 tVkIWd~~----------------------------~~~l----~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg  194 (588)
T 2j04_A          152 ELQFFSIR----------------------------KNSE----NTPEFYFESSIRLSDAGSKDWVTHIVWYEDV  194 (588)
T ss_dssp             EEEEEECC----------------------------CCTT----TCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred             EEEEEECC----------------------------CCcc----ccccceeeeeeecccccccccEEEEEEcCCc
Confidence            99999991                            1100    0000  35665    7788999999999997

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.74  E-value=8.8e-18  Score=141.18  Aligned_cols=131  Identities=19%  Similarity=0.250  Sum_probs=96.0

Q ss_pred             EEEEecCCcEEEEECCCC-----------CeE-----EEeecCCCEEEEEecCCCCCCCEEE----EEeCCCcEEEEECC
Q psy6415           2 VVAGYDNGDLKMFDLKTM-----------SLK-----WETNLKNGVCGVDFDRRDIPMNKLV----ATTLEAKLFVFDLK   61 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~-----------~~~-----~~~~~~~~V~sv~f~~~~~~~~~l~----s~s~Dg~I~iWD~~   61 (174)
                      |++|+.|+ |++|+....           ...     ....+...|++++|+|++   ++|+    +|+.|++|+|||++
T Consensus        51 l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg---~~lav~~~sgs~d~~v~iwd~~  126 (434)
T 2oit_A           51 VFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN---LTLSACMMSSEYGSIIAFFDVR  126 (434)
T ss_dssp             EEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS---CEEEEEEEETTTEEEEEEEEHH
T ss_pred             EEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC---CEEEEEEeccCCCceEEEEEcc
Confidence            67788887 999875311           111     122345679999999974   8888    78899999999997


Q ss_pred             Cc-----ccc-cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcc
Q psy6415          62 TL-----HRE-KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTK  135 (174)
Q Consensus        62 ~~-----~~~-~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (174)
                      +.     ... .......+.+|.. .|++++|+|+++.+||+|+.||+|++||++                         
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~~p~~~~~las~s~Dg~v~iwD~~-------------------------  180 (434)
T 2oit_A          127 TFSNEAKQQKRPFAYHKLLKDAGG-MVIDMKWNPTVPSMVAVCLADGSIAVLQVT-------------------------  180 (434)
T ss_dssp             HHHCTTCSSCCCSEEEECCCSGGG-SEEEEEECSSCTTEEEEEETTSCEEEEEES-------------------------
T ss_pred             ccccCCcCCcceeeeeeccCCCCC-ceEEEEECCCCCCEEEEEECCCeEEEEEcC-------------------------
Confidence            64     110 0011334567888 999999999767899999999999999991                         


Q ss_pred             cCCCCCccccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         136 PDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       136 ~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                         .         .+.+....+|...|++++|||||+-|
T Consensus       181 ---~---------~~~~~~~~~~~~~v~~v~wspdg~~l  207 (434)
T 2oit_A          181 ---E---------TVKVCATLPSTVAVTSVCWSPKGKQL  207 (434)
T ss_dssp             ---S---------SEEEEEEECGGGCEEEEEECTTSSCE
T ss_pred             ---C---------CcceeeccCCCCceeEEEEcCCCCEE
Confidence               1         12344556799999999999998643

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.74  E-value=1.2e-17  Score=137.19  Aligned_cols=96  Identities=10%  Similarity=-0.012  Sum_probs=70.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      ++||+.|++||+||+++++++...      .|...+.+.+++     +..+|+++.|++|||||+++++++     .++.
T Consensus       253 laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s-----g~~lASgS~DgTIkIWDl~tGk~l-----~tL~  322 (356)
T 2w18_A          253 ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK-----DHCAAAILTSGTIAIWDLLLGQCT-----ALLP  322 (356)
T ss_dssp             -----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE-----TTEEEEEETTSCEEEEETTTCSEE-----EEEC
T ss_pred             eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC-----CCEEEEEcCCCcEEEEECCCCcEE-----EEec
Confidence            589999999999999999876432      223334444444     267999999999999999997654     4556


Q ss_pred             ccCcCcEE-EEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVW-AAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~-~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|.. .++ +++||| ++.+||||+.|++|||||+
T Consensus       323 gH~~-~vvs~vafSP-DG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          323 PVSD-QHWSFVKWSG-TDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             CC---CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred             CCCC-CeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence            8887 666 589999 5679999999999999997

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.69  E-value=4.8e-16  Score=126.09  Aligned_cols=98  Identities=17%  Similarity=0.197  Sum_probs=79.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++++.|++|++||++++++.........+.+++|+|++   +.| ++++.|++|++||+++.+..     ..+. +.. 
T Consensus        47 ~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~~~~~~v~v~d~~~~~~~-----~~~~-~~~-  116 (391)
T 1l0q_A           47 YVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG---KQVYVTNMASSTLSVIDTTSNTVA-----GTVK-TGK-  116 (391)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS---SEEEEEETTTTEEEEEETTTTEEE-----EEEE-CSS-
T ss_pred             EEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCC---CEEEEEECCCCEEEEEECCCCeEE-----EEEe-CCC-
Confidence            477889999999999999988777767799999999974   666 45667899999999986543     2222 334 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.+++|+|++..++++++.|+.|++||+
T Consensus       117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~  145 (391)
T 1l0q_A          117 SPLGLALSPDGKKLYVTNNGDKTVSVINT  145 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             CcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence            68999999966556689999999999999

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.65  E-value=9.5e-16  Score=125.93  Aligned_cols=100  Identities=12%  Similarity=0.077  Sum_probs=81.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      ++++++.|++|++||+++++.....      .|...|.+++|+|++   ..+++++.|+.|++||+++.+..     ..+
T Consensus       136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~s~~~d~~v~~~d~~~~~~~-----~~~  207 (433)
T 3bws_A          136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN---ELWVSQMQANAVHVFDLKTLAYK-----ATV  207 (433)
T ss_dssp             EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT---EEEEEEGGGTEEEEEETTTCCEE-----EEE
T ss_pred             EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC---EEEEEECCCCEEEEEECCCceEE-----EEE
Confidence            3677888999999999999876532      345679999998863   78899999999999999886543     334


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..|.. .+.+++|+|++..++++++.|++|++||+
T Consensus       208 ~~~~~-~~~~~~~~~~~~~l~~~~~~~~~i~~~d~  241 (433)
T 3bws_A          208 DLTGK-WSKILLYDPIRDLVYCSNWISEDISVIDR  241 (433)
T ss_dssp             ECSSS-SEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             cCCCC-CeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence            47777 89999999976666678889999999999

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.65  E-value=5.2e-15  Score=123.14  Aligned_cols=117  Identities=15%  Similarity=0.144  Sum_probs=89.4

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC---cEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA---KLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg---~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ++|++||++++.......+...|.+++|+|++   +.|++++.|+   .|++||++++++.      .+..|.. .+.++
T Consensus       159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg---~~la~~s~~~~~~~i~~~d~~tg~~~------~l~~~~~-~~~~~  228 (415)
T 2hqs_A          159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG---SKLAYVTFESGRSALVIQTLANGAVR------QVASFPR-HNGAP  228 (415)
T ss_dssp             EEEEEEETTSCSCEEEEEESSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCEE------EEECCSS-CEEEE
T ss_pred             ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC---CEEEEEEecCCCcEEEEEECCCCcEE------EeecCCC-cccCE
Confidence            79999999876665555677889999999974   8999999885   9999999986532      2346777 89999


Q ss_pred             EEcCCCCCEEEEEcCCCc--EEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccccee
Q psy6415          86 KHLPQNRDLFVTCGGSGS--LNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPIN  163 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~--V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~  163 (174)
                      +|+|++..++++++.||.  |++||++                            .|         + +..+..|...+.
T Consensus       229 ~~spdg~~la~~~~~~g~~~i~~~d~~----------------------------~~---------~-~~~l~~~~~~~~  270 (415)
T 2hqs_A          229 AFSPDGSKLAFALSKTGSLNLYVMDLA----------------------------SG---------Q-IRQVTDGRSNNT  270 (415)
T ss_dssp             EECTTSSEEEEEECTTSSCEEEEEETT----------------------------TC---------C-EEECCCCSSCEE
T ss_pred             EEcCCCCEEEEEEecCCCceEEEEECC----------------------------CC---------C-EEeCcCCCCccc
Confidence            999965444447877776  8888981                            11         1 245567778888


Q ss_pred             eeeeCCCCCC
Q psy6415         164 SLDWSADKLG  173 (174)
Q Consensus       164 ~l~~spd~~~  173 (174)
                      +++|||||+.
T Consensus       271 ~~~~spdg~~  280 (415)
T 2hqs_A          271 EPTWFPDSQN  280 (415)
T ss_dssp             EEEECTTSSE
T ss_pred             ceEECCCCCE
Confidence            8899998863

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.65  E-value=1.9e-15  Score=124.17  Aligned_cols=124  Identities=10%  Similarity=0.079  Sum_probs=96.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe--------CCCcEEEEECCCcccccceeeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT--------LEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s--------~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +++++.|++|++||+++++..........+.+++|+|++   +.|++++        .|+.|++||+++.+...     .
T Consensus       227 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g---~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~-----~  298 (433)
T 3bws_A          227 YCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDG---KELYIAQFSASNQESGGGRLGIYSMDKEKLID-----T  298 (433)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTS---SEEEEEEEESCTTCSCCEEEEEEETTTTEEEE-----E
T ss_pred             EEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCC---CEEEEEECCCCccccCCCeEEEEECCCCcEEe-----e
Confidence            356778999999999999887766666679999999974   7888877        58999999999865322     1


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceee
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQ  153 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~  153 (174)
                       ..|.. .+.+++|+|++..++++++.|++|++||++                            .         ++++.
T Consensus       299 -~~~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~----------------------------~---------~~~~~  339 (433)
T 3bws_A          299 -IGPPG-NKRHIVSGNTENKIYVSDMCCSKIEVYDLK----------------------------E---------KKVQK  339 (433)
T ss_dssp             -EEEEE-CEEEEEECSSTTEEEEEETTTTEEEEEETT----------------------------T---------TEEEE
T ss_pred             -ccCCC-CcceEEECCCCCEEEEEecCCCEEEEEECC----------------------------C---------CcEEE
Confidence             25556 789999999766788999999999999991                            1         13344


Q ss_pred             eeeccccceeeeeeCCCCCC
Q psy6415         154 EATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       154 ~~~~h~~~V~~l~~spd~~~  173 (174)
                      .+. |...+.+++|+||++.
T Consensus       340 ~~~-~~~~~~~~~~s~dg~~  358 (433)
T 3bws_A          340 SIP-VFDKPNTIALSPDGKY  358 (433)
T ss_dssp             EEE-CSSSEEEEEECTTSSE
T ss_pred             Eec-CCCCCCeEEEcCCCCE
Confidence            443 5677889999998863

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.58  E-value=8.4e-14  Score=115.80  Aligned_cols=97  Identities=12%  Similarity=0.114  Sum_probs=73.9

Q ss_pred             EEEEecCC---cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCCc--EEEEECCCcccccceeeeeec
Q psy6415           2 VVAGYDNG---DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEAK--LFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         2 lasgs~Dg---~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~--I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      ||+++.|+   +|++||++++++.....+...+.+++|+|++   +.|+ +++.|+.  |++||+++.+.      ..+.
T Consensus       193 la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg---~~la~~~~~~g~~~i~~~d~~~~~~------~~l~  263 (415)
T 2hqs_A          193 LAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG---SKLAFALSKTGSLNLYVMDLASGQI------RQVT  263 (415)
T ss_dssp             EEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCE------EECC
T ss_pred             EEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCC---CEEEEEEecCCCceEEEEECCCCCE------EeCc
Confidence            77888875   9999999999887656667789999999974   7777 6776665  99999988643      2345


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcC-CC--cEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGG-SG--SLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~-Dg--~V~lWd~  109 (174)
                      .|.. .+.+++|+|+ +..|+.++. ++  .|.+||+
T Consensus       264 ~~~~-~~~~~~~spd-g~~l~~~s~~~g~~~i~~~d~  298 (415)
T 2hqs_A          264 DGRS-NNTEPTWFPD-SQNLAFTSDQAGRPQVYKVNI  298 (415)
T ss_dssp             CCSS-CEEEEEECTT-SSEEEEEECTTSSCEEEEEET
T ss_pred             CCCC-cccceEECCC-CCEEEEEECCCCCcEEEEEEC
Confidence            7777 8999999995 455666654 56  4555566

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.52  E-value=2.9e-13  Score=116.77  Aligned_cols=98  Identities=12%  Similarity=0.084  Sum_probs=78.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEEC--CCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDL--KTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~--~~~~~~~~~~~~~~~~h~   78 (174)
                      ++++++.|++|.+||..+++++........+.+++|+|++   ++|++++.|++|++||+  ++.++.     .++. +.
T Consensus       151 ~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg---~~l~v~~~d~~V~v~D~~~~t~~~~-----~~i~-~g  221 (543)
T 1nir_A          151 FSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASG---RYLLVIGRDARIDMIDLWAKEPTKV-----AEIK-IG  221 (543)
T ss_dssp             EEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTS---CEEEEEETTSEEEEEETTSSSCEEE-----EEEE-CC
T ss_pred             EEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCC---CEEEEECCCCeEEEEECcCCCCcEE-----EEEe-cC
Confidence            3688999999999999999988776644459999999974   89999999999999999  665432     3333 33


Q ss_pred             cCcEEEEEEcC----CCCCEEEEEc-CCCcEEEEec
Q psy6415          79 ATTVWAAKHLP----QNRDLFVTCG-GSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP----~~~~~las~s-~Dg~V~lWd~  109 (174)
                      . ..+.++|+|    ++. ++++++ .+++|.+||.
T Consensus       222 ~-~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~  255 (543)
T 1nir_A          222 I-EARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDG  255 (543)
T ss_dssp             S-EEEEEEECCSTTCTTT-EEEEEEEESSEEEEEET
T ss_pred             C-CcceEEeCCCcCCCCC-EEEEEEccCCeEEEEec
Confidence            4 679999999    765 455555 6999999999

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.48  E-value=4.6e-13  Score=102.95  Aligned_cols=127  Identities=12%  Similarity=0.127  Sum_probs=91.7

Q ss_pred             EEEecCCcEEEEEC--CCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           3 VAGYDNGDLKMFDL--KTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         3 asgs~Dg~iklWDl--~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      ++++.|+.++||++  .++.......+...+.+++|+|++   +.|+.++ .|+.++||+++....    ....+..|..
T Consensus       145 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~  217 (297)
T 2ojh_A          145 YCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDG---RWIYFNSSRTGQMQIWRVRVDGS----SVERITDSAY  217 (297)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTSS----CEEECCCCSE
T ss_pred             EEECCCCceEEEEEECCCCcceEcccCCCccccceECCCC---CEEEEEecCCCCccEEEECCCCC----CcEEEecCCc
Confidence            47888999999995  455554444556789999999974   7777655 699999999873211    1234456777


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCC-----------CcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGS-----------GSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGS  148 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~D-----------g~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~  148 (174)
                       .+.+++|+|+ +..|++++.+           +.|++||++                            .|       .
T Consensus       218 -~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~----------------------------~~-------~  260 (297)
T 2ojh_A          218 -GDWFPHPSPS-GDKVVFVSYDADVFDHPRDLDVRVQLMDMD----------------------------GG-------N  260 (297)
T ss_dssp             -EEEEEEECTT-SSEEEEEEEETTCCSCCSSEEEEEEEEETT----------------------------SC-------S
T ss_pred             -ccCCeEECCC-CCEEEEEEcCCCCCcccccCceEEEEEecC----------------------------CC-------C
Confidence             8999999995 5667777665           569999991                            11       1


Q ss_pred             cceeeeeeccccceeeeeeCCCCCC
Q psy6415         149 LTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       149 ~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      .+.+..+.+|...|.+++||||++-
T Consensus       261 ~~~~~~~~~~~~~~~~~~~spdg~~  285 (297)
T 2ojh_A          261 VETLFDLFGGQGTMNSPNWSPDGDE  285 (297)
T ss_dssp             CEEEEEEEESTTTSCSCCBCTTSSE
T ss_pred             ceeeeccCCCCcccccceECCCCCE
Confidence            1245666788999999999999874

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.47  E-value=3.4e-13  Score=106.24  Aligned_cols=105  Identities=10%  Similarity=0.074  Sum_probs=75.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCC---CEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN---GVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~---~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|++++.|++|++||+.+++.........   .+..++|+|++   +.+ ++++.++.|.+||+.+.+....+.......
T Consensus         3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~   79 (337)
T 1pby_B            3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGG---RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE   79 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTS---SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred             EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCC---CEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence            47899999999999999998876665444   58899999974   555 566778999999998866432221100000


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEc------------CCCcEEEEecc
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCG------------GSGSLNLWQLV  110 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s------------~Dg~V~lWd~~  110 (174)
                      |.. .+..++|+|+ +..+++++            .++.|.+||++
T Consensus        80 ~~~-~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~  123 (337)
T 1pby_B           80 RVK-SLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAE  123 (337)
T ss_dssp             EEE-CTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETT
T ss_pred             ccc-cccceEECCC-CCEEEEEecccccccccccccCceEEEEECC
Confidence            223 4568999995 44556664            57999999993

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.47  E-value=3.7e-13  Score=103.48  Aligned_cols=95  Identities=14%  Similarity=0.199  Sum_probs=73.5

Q ss_pred             EEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC-cccccceeeeeecccC-cCc
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT-LHREKGFAYLSEKAHK-ATT   81 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~-~~~~~~~~~~~~~~h~-~~~   81 (174)
                      +++.|++|++||+++++......+...|.+++|+|++   +.|++++ ++.|++||+++ .+...     ....|. . .
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~-~~~i~~~d~~~~~~~~~-----~~~~~~~~-~   86 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDG---KYLLLNS-EGLLYRLSLAGDPSPEK-----VDTGFATI-C   86 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTS---SEEEEEE-TTEEEEEESSSCCSCEE-----CCCTTCCC-B
T ss_pred             CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCC---CEEEEEc-CCeEEEEeCCCCCCceE-----eccccccc-c
Confidence            3467899999999999887666778889999999974   7888876 88999999988 65321     122443 4 7


Q ss_pred             EEEEEEcCCCCCEEEEEc--CCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCG--GSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s--~Dg~V~lWd~  109 (174)
                      +.+++|+|+ +..|++++  .++.++||.+
T Consensus        87 ~~~~~~spd-g~~l~~~~~~~~~~~~l~~~  115 (297)
T 2ojh_A           87 NNDHGISPD-GALYAISDKVEFGKSAIYLL  115 (297)
T ss_dssp             CSCCEECTT-SSEEEEEECTTTSSCEEEEE
T ss_pred             ccceEECCC-CCEEEEEEeCCCCcceEEEE
Confidence            889999995 56778887  5567888877

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.45  E-value=1.5e-13  Score=120.35  Aligned_cols=95  Identities=8%  Similarity=0.055  Sum_probs=71.7

Q ss_pred             EEEecCCcEEEEECCCCCeEEEeecCC----CEEEEEecCCCCCCCEEEEEeC---------CCcEEEEECCCcccccce
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWETNLKN----GVCGVDFDRRDIPMNKLVATTL---------EAKLFVFDLKTLHREKGF   69 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~~~~~----~V~sv~f~~~~~~~~~l~s~s~---------Dg~I~iWD~~~~~~~~~~   69 (174)
                      +..+.|++|++||+.+++......+..    .|.+++|||++   +.||+++.         |++|++||+.+++.... 
T Consensus        30 ~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg---~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-  105 (719)
T 1z68_A           30 LHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR---QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-  105 (719)
T ss_dssp             EEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS---SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-
T ss_pred             EEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC---CeEEEEecCceeEEeecceEEEEEECCCCccccc-
Confidence            344569999999999998776554332    48999999974   88988876         79999999998754210 


Q ss_pred             eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                        ..+   .. .+.+++|||+ +..||.++ |++|++||+
T Consensus       106 --~~l---~~-~~~~~~~SPD-G~~la~~~-~~~i~~~~~  137 (719)
T 1z68_A          106 --NEL---PR-PIQYLCWSPV-GSKLAYVY-QNNIYLKQR  137 (719)
T ss_dssp             --SCC---CS-SBCCEEECSS-TTCEEEEE-TTEEEEESS
T ss_pred             --eec---Cc-ccccceECCC-CCEEEEEE-CCeEEEEeC
Confidence              111   24 6889999995 55677765 889999999

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.44  E-value=1.2e-13  Score=120.69  Aligned_cols=95  Identities=6%  Similarity=0.004  Sum_probs=72.1

Q ss_pred             ecCCcEEEEECCCCCeEEEeecCC----CEEEEEecCCCCCCCEEEEEeCC---------CcEEEEECCCcccccceeee
Q psy6415           6 YDNGDLKMFDLKTMSLKWETNLKN----GVCGVDFDRRDIPMNKLVATTLE---------AKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~~~~----~V~sv~f~~~~~~~~~l~s~s~D---------g~I~iWD~~~~~~~~~~~~~   72 (174)
                      +.||+|++||+.++++......+.    .|.+++|+|++   ++||+++.+         +.|++||+++++..   .+.
T Consensus        34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg---~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~l~  107 (723)
T 1xfd_A           34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR---EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ---SLD  107 (723)
T ss_dssp             CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS---SEEEEEESCCCCSSSCCCSEEEEEESSSCCCE---ECC
T ss_pred             eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCC---CEEEEEecCccceeecceeeEEEEECCCCceE---ecc
Confidence            679999999999998766554433    48999999974   889998775         78889999986531   122


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ....|.. .+..++|||+ +..||.++. +.|++||+
T Consensus       108 ~~~~~~~-~~~~~~~SPd-G~~la~~~~-~~i~~~~~  141 (723)
T 1xfd_A          108 PPEVSNA-KLQYAGWGPK-GQQLIFIFE-NNIYYCAH  141 (723)
T ss_dssp             CTTCCSC-CCSBCCBCSS-TTCEEEEET-TEEEEESS
T ss_pred             CCccccc-cccccEECCC-CCEEEEEEC-CeEEEEEC
Confidence            2234555 5889999995 556787775 79999999

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.44  E-value=2.3e-12  Score=111.20  Aligned_cols=106  Identities=16%  Similarity=0.148  Sum_probs=83.3

Q ss_pred             CEEEEecCCcEEEEEC--CCCCeEEEeecCCCEEEEEecC----CCCCCCEEEEEe-CCCcEEEEECCCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDL--KTMSLKWETNLKNGVCGVDFDR----RDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl--~~~~~~~~~~~~~~V~sv~f~~----~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +|++++.|++|++||+  .+++++........+.+|+|+|    ++   ++|++++ .+++|+|||..+.++++.+....
T Consensus       192 ~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg---~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g  268 (543)
T 1nir_A          192 YLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED---RYTIAGAYWPPQFAIMDGETLEPKQIVSTRG  268 (543)
T ss_dssp             EEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTT---TEEEEEEEESSEEEEEETTTCCEEEEEECCE
T ss_pred             EEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCC---CEEEEEEccCCeEEEEeccccccceeecccC
Confidence            3788899999999999  7888777666667799999999    75   7888777 58999999999877654332111


Q ss_pred             e-----cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          74 E-----KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~-----~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .     .-|....+.++.|+|+++.++++...+++|.+||+
T Consensus       269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~  309 (543)
T 1nir_A          269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY  309 (543)
T ss_dssp             ECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred             cccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence            0     01322268899999988889999999999999999

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.44  E-value=4.2e-12  Score=100.50  Aligned_cols=98  Identities=12%  Similarity=0.173  Sum_probs=71.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEE-eCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVAT-TLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~-s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +++++.+++|++||+.++++...... ...+ +++|+|++   +.|+++ ..++.|.+||+++.+..    ...+..+..
T Consensus        13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg---~~l~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~   84 (331)
T 3u4y_A           13 IVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDC---SNVVVTSDFCQTLVQIETQLEPPK----VVAIQEGQS   84 (331)
T ss_dssp             EEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSS---CEEEEEESTTCEEEEEECSSSSCE----EEEEEECSS
T ss_pred             EEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCC---CEEEEEeCCCCeEEEEECCCCcee----EEecccCCC
Confidence            67889999999999999988765543 3445 99999974   666555 45899999999886531    223334555


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCC---cEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSG---SLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg---~V~lWd~  109 (174)
                       +..+++|+|+ +..++++..++   .|++||+
T Consensus        85 -~~~~~~~s~d-g~~l~~~~~~~~~~~i~v~d~  115 (331)
T 3u4y_A           85 -SMADVDITPD-DQFAVTVTGLNHPFNMQSYSF  115 (331)
T ss_dssp             -CCCCEEECTT-SSEEEECCCSSSSCEEEEEET
T ss_pred             -CccceEECCC-CCEEEEecCCCCcccEEEEEC
Confidence             5555999995 45666555553   8999999

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.42  E-value=2e-12  Score=113.44  Aligned_cols=95  Identities=17%  Similarity=0.191  Sum_probs=74.2

Q ss_pred             EEEEec-CC-----cEEEEECCCCCeEEEeecC-------------------------CCEEEEEecCCCCCCCEEEEEe
Q psy6415           2 VVAGYD-NG-----DLKMFDLKTMSLKWETNLK-------------------------NGVCGVDFDRRDIPMNKLVATT   50 (174)
Q Consensus         2 lasgs~-Dg-----~iklWDl~~~~~~~~~~~~-------------------------~~V~sv~f~~~~~~~~~l~s~s   50 (174)
                      ||+++. |+     +|++||+.+++........                         ..|.+++|+|++   +.|++++
T Consensus        51 la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg---~~l~~~~  127 (741)
T 2ecf_A           51 VTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA---QRLLFPL  127 (741)
T ss_dssp             EEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS---SEEEEEE
T ss_pred             EEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC---CEEEEEe
Confidence            778887 88     9999999999876554321                         237889999974   8898888


Q ss_pred             CCCcEEEEECCCc---ccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          51 LEAKLFVFDLKTL---HREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        51 ~Dg~I~iWD~~~~---~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . +.|++||+.+.   ...      .+..|.. .+..++|||+ +..||.++ ++.|++||+
T Consensus       128 ~-~~i~~~d~~~~~~~~~~------~l~~~~~-~~~~~~~SPD-G~~la~~~-~~~i~~~d~  179 (741)
T 2ecf_A          128 G-GELYLYDLKQEGKAAVR------QLTHGEG-FATDAKLSPK-GGFVSFIR-GRNLWVIDL  179 (741)
T ss_dssp             T-TEEEEEESSSCSTTSCC------BCCCSSS-CEEEEEECTT-SSEEEEEE-TTEEEEEET
T ss_pred             C-CcEEEEECCCCCcceEE------EcccCCc-ccccccCCCC-CCEEEEEe-CCcEEEEec
Confidence            6 99999999886   321      2346667 8999999995 56778776 569999999

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.41  E-value=1.4e-12  Score=103.39  Aligned_cols=100  Identities=9%  Similarity=0.094  Sum_probs=74.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCC--CEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKN--GVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~--~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      ++++++.|++|++||+.+++.........  .+..++|+|++   +.+ +++..++.|.+||+++.+....+.   . .+
T Consensus        13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~~~v~~~~~~~i~~~d~~t~~~~~~~~---~-~~   85 (349)
T 1jmx_B           13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN---RTAYVLNNHYGDIYGIDLDTCKNTFHAN---L-SS   85 (349)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS---SEEEEEETTTTEEEEEETTTTEEEEEEE---S-CC
T ss_pred             EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCC---CEEEEEeCCCCcEEEEeCCCCcEEEEEE---c-cc
Confidence            36889999999999999998776655444  68899999974   655 566789999999998865432111   1 12


Q ss_pred             -----CcCcEEEEEEcCCCCCEEEEEcCC------------CcEEEEec
Q psy6415          78 -----KATTVWAAKHLPQNRDLFVTCGGS------------GSLNLWQL  109 (174)
Q Consensus        78 -----~~~~i~~v~fsP~~~~~las~s~D------------g~V~lWd~  109 (174)
                           .. .+..++|+|+ +..|++++.+            +.|.+||+
T Consensus        86 ~~~~~~~-~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~  132 (349)
T 1jmx_B           86 VPGEVGR-SMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFST  132 (349)
T ss_dssp             STTEEEE-CSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred             ccccccc-cccceEECCC-CCEEEEEcccccccccccccCCCeEEEEEC
Confidence                 12 3778999995 5566767655            89999999

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.41  E-value=2.5e-12  Score=117.85  Aligned_cols=98  Identities=14%  Similarity=0.180  Sum_probs=77.7

Q ss_pred             EEEEecCCcEE-EEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLK-MFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~ik-lWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |+.+++++.|. +||+.+++......+...+.+++|+|++   +.|++++.++.|++||+++++..     .....|.. 
T Consensus       351 l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG---~~la~~~~~~~v~~~d~~tg~~~-----~~~~~~~~-  421 (1045)
T 1k32_A          351 FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG---KFAVVANDRFEIMTVDLETGKPT-----VIERSREA-  421 (1045)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTS---SEEEEEETTSEEEEEETTTCCEE-----EEEECSSS-
T ss_pred             EEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCC---CEEEEECCCCeEEEEECCCCceE-----EeccCCCC-
Confidence            56777788888 9999888765444455779999999974   89999999999999999886532     12336777 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCC----------cEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSG----------SLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg----------~V~lWd~  109 (174)
                      .+.+++|||+ +..||+++.++          .|++||+
T Consensus       422 ~v~~~~~SpD-G~~la~~~~~~~~~~~~~~~~~i~l~d~  459 (1045)
T 1k32_A          422 MITDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDM  459 (1045)
T ss_dssp             CCCCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred             CccceEECCC-CCeEEEEecCccccccCCCCCeEEEEEC
Confidence            8999999995 56777776654          9999999

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.40  E-value=9.8e-12  Score=98.38  Aligned_cols=103  Identities=10%  Similarity=0.048  Sum_probs=73.2

Q ss_pred             EEEEecCC---cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCc-EEEEECCCcccccceeeeeecc
Q psy6415           2 VVAGYDNG---DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAK-LFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg---~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~-I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      |+++..++   .|++||+++++............+++|+|++   +.| ++...++. |++||+.............+ .
T Consensus        98 l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~  173 (331)
T 3u4y_A           98 AVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNG---NGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-S  173 (331)
T ss_dssp             EEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTS---SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-C
T ss_pred             EEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCC---CEEEEEecCCCceEEEEEECCCCcEeecCCccc-c
Confidence            44444443   8999999999887766666778999999975   544 55667788 99999985332111101111 2


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ... ....++|+|++..+++++..+++|++||+
T Consensus       174 ~~~-~~~~~~~spdg~~l~v~~~~~~~v~v~d~  205 (331)
T 3u4y_A          174 GGT-RPFNITFTPDGNFAFVANLIGNSIGILET  205 (331)
T ss_dssp             SSS-SEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             CCC-CccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence            334 67899999966557788888999999999

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.40  E-value=2e-12  Score=102.07  Aligned_cols=100  Identities=10%  Similarity=0.098  Sum_probs=71.2

Q ss_pred             EEEEecCCcEEEEECC-CCCe--EEEeecCCCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECC--Ccccccceeeeeec
Q psy6415           2 VVAGYDNGDLKMFDLK-TMSL--KWETNLKNGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLK--TLHREKGFAYLSEK   75 (174)
Q Consensus         2 lasgs~Dg~iklWDl~-~~~~--~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~--~~~~~~~~~~~~~~   75 (174)
                      +++++.|+.|++||+. ++..  .....+...+.+++|+|++   +.|++++.+ +.|++||+.  +.+..   ....+.
T Consensus         8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~v~~~~~~~~~~~~~---~~~~~~   81 (343)
T 1ri6_A            8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDK---RYLYVGVRPEFRVLAYRIAPDDGALT---FAAESA   81 (343)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTS---SEEEEEETTTTEEEEEEECTTTCCEE---EEEEEE
T ss_pred             EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCC---CEEEEeecCCCeEEEEEecCCCCcee---eccccc
Confidence            4566889999999995 3433  3334566778899999974   778887776 999999997  33311   112222


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . .. .+..++|+|++..+++++..++.|++||+
T Consensus        82 ~-~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~  113 (343)
T 1ri6_A           82 L-PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL  113 (343)
T ss_dssp             C-SS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             c-CC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence            2 23 57899999966556666667999999999

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.40  E-value=1.4e-11  Score=97.09  Aligned_cols=104  Identities=13%  Similarity=0.082  Sum_probs=69.6

Q ss_pred             EEEEe-cCCcEEEEECCC-CCeEEE------eecCCCEEEEEecCCCCCCCEEE-EEeCCCcEEEEECCC--ccccccee
Q psy6415           2 VVAGY-DNGDLKMFDLKT-MSLKWE------TNLKNGVCGVDFDRRDIPMNKLV-ATTLEAKLFVFDLKT--LHREKGFA   70 (174)
Q Consensus         2 lasgs-~Dg~iklWDl~~-~~~~~~------~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~I~iWD~~~--~~~~~~~~   70 (174)
                      |++++ .|+.|++||+++ ++....      ......+..++|+|++   +.|+ ++..++.|++||++.  .+......
T Consensus       143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg---~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~  219 (343)
T 1ri6_A          143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE---QYAYCVNELNSSVDVWELKDPHGNIECVQT  219 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS---SEEEEEETTTTEEEEEESSCTTSCCEEEEE
T ss_pred             EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCcEEEEee
Confidence            44455 899999999987 655321      1223578899999974   6564 555899999999964  22110001


Q ss_pred             eeeec-cc--CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          71 YLSEK-AH--KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        71 ~~~~~-~h--~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...+. .+  .. .+..++|+|++..++++++.|+.|++||+
T Consensus       220 ~~~~~~~~~~~~-~~~~i~~s~dg~~l~v~~~~~~~i~v~d~  260 (343)
T 1ri6_A          220 LDMMPENFSDTR-WAADIHITPDGRHLYACDRTASLITVFSV  260 (343)
T ss_dssp             EECSCTTCCSCC-CEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             ccccCccccccC-CccceEECCCCCEEEEEecCCCEEEEEEE
Confidence            11111 11  23 56789999976667778889999999999

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.39  E-value=1.2e-12  Score=112.28  Aligned_cols=94  Identities=13%  Similarity=0.076  Sum_probs=72.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC----CcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE----AKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D----g~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +++++.|+ +.|||+.++++.....+..  .+++|+|++   +.|++++.|    ..|++||+++++.      ..+..|
T Consensus       126 ~~s~~~~~-~~l~d~~~g~~~~l~~~~~--~~~~~spDG---~~la~~~~~~~~~~~i~~~d~~~g~~------~~l~~~  193 (582)
T 3o4h_A          126 FTGATEDR-VALYALDGGGLRELARLPG--FGFVSDIRG---DLIAGLGFFGGGRVSLFTSNLSSGGL------RVFDSG  193 (582)
T ss_dssp             EEEECSSC-EEEEEEETTEEEEEEEESS--CEEEEEEET---TEEEEEEEEETTEEEEEEEETTTCCC------EEECCS
T ss_pred             EEecCCCC-ceEEEccCCcEEEeecCCC--ceEEECCCC---CEEEEEEEcCCCCeEEEEEcCCCCCc------eEeecC
Confidence            44555555 4599999987765544443  789999974   899988877    7899999988653      234577


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCC--cEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSG--SLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg--~V~lWd~  109 (174)
                      .. .+.+++|||+ +..||+++.||  +|++||+
T Consensus       194 ~~-~~~~~~~SpD-G~~l~~~~~~~~~~i~~~d~  225 (582)
T 3o4h_A          194 EG-SFSSASISPG-MKVTAGLETAREARLVTVDP  225 (582)
T ss_dssp             SC-EEEEEEECTT-SCEEEEEECSSCEEEEEECT
T ss_pred             CC-ccccceECCC-CCEEEEccCCCeeEEEEEcC
Confidence            77 8999999995 56778888899  8999999

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.38  E-value=1.5e-11  Score=99.06  Aligned_cols=104  Identities=6%  Similarity=0.127  Sum_probs=69.2

Q ss_pred             EEEEecCCcEEEEECCCCC-------eE-------EEeecCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMS-------LK-------WETNLKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHRE   66 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~-------~~-------~~~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~   66 (174)
                      ++++..++.|++|++....       +.       ........+..++|+|++   +.|++++ .++.|++||+++....
T Consensus       170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~v~~~~~~~v~v~~~~~g~~~  246 (361)
T 3scy_A          170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG---KFAYLINEIGGTVIAFRYADGMLD  246 (361)
T ss_dssp             EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTCEEEEEEEETTEEE
T ss_pred             EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCC---CEEEEEcCCCCeEEEEEecCCceE
Confidence            3555568999999887433       21       122335678999999974   7776665 7999999999865321


Q ss_pred             cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEec
Q psy6415          67 KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQL  109 (174)
Q Consensus        67 ~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~  109 (174)
                      ..........+.. ....++|+|++..++++... +++|.+|++
T Consensus       247 ~~~~~~~~~~~~~-~~~~i~~spdg~~l~v~~~~~~~~i~v~~~  289 (361)
T 3scy_A          247 EIQTVAADTVNAQ-GSGDIHLSPDGKYLYASNRLKADGVAIFKV  289 (361)
T ss_dssp             EEEEEESCSSCCC-CEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred             EeEEEecCCCCCC-CcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence            1111112223334 57899999965545566666 699999999

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.34  E-value=5.2e-12  Score=111.87  Aligned_cols=94  Identities=6%  Similarity=-0.028  Sum_probs=70.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecC-C-----CEEEEEecCCCCCCCEEEEEeCC---------CcEEEEECCCcccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLK-N-----GVCGVDFDRRDIPMNKLVATTLE---------AKLFVFDLKTLHRE   66 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~-~-----~V~sv~f~~~~~~~~~l~s~s~D---------g~I~iWD~~~~~~~   66 (174)
                      |+++  ||+|++||+.++++......+ .     ...+++|||++   +.|+.++.+         +.+.|||+.+++..
T Consensus        31 ~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg---~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~  105 (740)
T 4a5s_A           31 LYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG---QFILLEYNYVKQWRHSYTASYDIYDLNKRQLI  105 (740)
T ss_dssp             EEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS---SEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred             EEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC---CEEEEEECCeeeEEEccceEEEEEECCCCcEE
Confidence            5554  999999999999876554322 1     23458899974   889998877         55679999987532


Q ss_pred             cceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          67 KGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        67 ~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                            .+..|.. .+..++|||++ ..||.+ .|+.|++|++
T Consensus       106 ------~l~~~~~-~~~~~~~SPdG-~~la~~-~~~~i~~~~~  139 (740)
T 4a5s_A          106 ------TEERIPN-NTQWVTWSPVG-HKLAYV-WNNDIYVKIE  139 (740)
T ss_dssp             ------CSSCCCT-TEEEEEECSST-TCEEEE-ETTEEEEESS
T ss_pred             ------EcccCCC-cceeeEECCCC-CEEEEE-ECCeEEEEEC
Confidence                  2346667 89999999954 566776 4789999999

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.33  E-value=3e-11  Score=96.57  Aligned_cols=130  Identities=15%  Similarity=0.153  Sum_probs=86.3

Q ss_pred             EEEEecCCcEEEEECC-CCCeEEEe--e--cCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCC--cccccceeeee
Q psy6415           2 VVAGYDNGDLKMFDLK-TMSLKWET--N--LKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKT--LHREKGFAYLS   73 (174)
Q Consensus         2 lasgs~Dg~iklWDl~-~~~~~~~~--~--~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~--~~~~~~~~~~~   73 (174)
                      ++++..++.|++||++ ++++....  .  ....+..++|+|++   +.| +++..++.|++||++.  .+..   ....
T Consensus       155 ~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg---~~l~v~~~~~~~v~v~~~~~~~g~~~---~~~~  228 (347)
T 3hfq_A          155 AVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG---QYAFLAGELSSQIASLKYDTQTGAFT---QLGI  228 (347)
T ss_dssp             EEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEEETTTTEEE---EEEE
T ss_pred             EEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCceE---Eeee
Confidence            5677778999999998 56543321  1  23468899999974   655 4567889999999885  2211   0111


Q ss_pred             ecccC------cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccc
Q psy6415          74 EKAHK------ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPG  147 (174)
Q Consensus        74 ~~~h~------~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~  147 (174)
                      +....      . .+..++|+|++..+++++..+++|.+|+++.                           +|       
T Consensus       229 ~~~~~~~~~~~~-~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~---------------------------~g-------  273 (347)
T 3hfq_A          229 VKTIPADYTAHN-GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA---------------------------DG-------  273 (347)
T ss_dssp             EESSCTTCCSCC-EEEEEEECTTSCEEEEEEETTTEEEEEEECG---------------------------GG-------
T ss_pred             eeecCCCCCCCC-cceeEEECCCCCEEEEEeCCCCEEEEEEECC---------------------------CC-------
Confidence            11111      3 5889999996655668888899999999910                           11       


Q ss_pred             ccceeeeeeccccceeeeeeCCCCC
Q psy6415         148 SLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       148 ~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      +.+++..+..|...+++|+|||||+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~spdg~  298 (347)
T 3hfq_A          274 HLTLIQQISTEGDFPRDFDLDPTEA  298 (347)
T ss_dssp             CEEEEEEEECSSSCCCEEEECTTSS
T ss_pred             cEEEeEEEecCCCCcCeEEECCCCC
Confidence            1234555666666677788888775

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.31  E-value=2.6e-12  Score=112.53  Aligned_cols=98  Identities=9%  Similarity=0.081  Sum_probs=65.7

Q ss_pred             EEEEec---------CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           2 VVAGYD---------NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         2 lasgs~---------Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      ||+++.         |++|++||+.+++..........+.+++|+|++   +.||+++ |+.|++||+.+++..+   + 
T Consensus        74 la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG---~~la~~~-~~~i~~~~~~~g~~~~---l-  145 (719)
T 1z68_A           74 VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVG---SKLAYVY-QNNIYLKQRPGDPPFQ---I-  145 (719)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSST---TCEEEEE-TTEEEEESSTTSCCEE---C-
T ss_pred             EEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCC---CEEEEEE-CCeEEEEeCCCCCcEE---E-
Confidence            566665         799999999998762111223568899999975   8888886 7899999998765321   1 


Q ss_pred             eecccCcCcE-----------------EEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415          73 SEKAHKATTV-----------------WAAKHLPQNRDLFVTCGGS-GSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i-----------------~~v~fsP~~~~~las~s~D-g~V~lWd~  109 (174)
                      +..++.. .|                 .+++|||+ +..||+++.| +.+.+|.+
T Consensus       146 ~~~~~~~-~v~~g~~~~v~~ee~~~~~~~~~wSPD-G~~la~~~~d~~~~~~~~~  198 (719)
T 1z68_A          146 TFNGREN-KIFNGIPDWVYEEEMLATKYALWWSPN-GKFLAYAEFNDTDIPVIAY  198 (719)
T ss_dssp             CCCCBTT-TEEESSCCHHHHHHTTCSSCCEEECTT-SSEEEEEEEECTTSCEEEE
T ss_pred             ecCCCcC-CeEcccccceeeeecccCcccEEECCC-CCEEEEEEECCCCCceEEe
Confidence            1112222 22                 48999995 5678888765 44444433

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.31  E-value=3e-11  Score=95.89  Aligned_cols=94  Identities=10%  Similarity=0.069  Sum_probs=69.5

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCE-EEEEeCCCcEEEEECCCcccccceeeeeecccCcC------
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNK-LVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT------   80 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~-l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~------   80 (174)
                      +++|.+||+.+++..........+.+++|+|++   +. ++++..++.|.+||+++.+....+     ..+...      
T Consensus        68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~v~~~~~~~v~~~d~~~~~~~~~~-----~~~~~~~~~~~~  139 (353)
T 3vgz_A           68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTT---QTLWFGNTVNSAVTAIDAKTGEVKGRL-----VLDDRKRTEEVR  139 (353)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSEEEETTT---TEEEEEETTTTEEEEEETTTCCEEEEE-----ESCCCCCCSSCC
T ss_pred             CccEEEEcCCCCeEEEEEecCCCcceEEECCCC---CEEEEEecCCCEEEEEeCCCCeeEEEE-----ecCCCccccccC
Confidence            678999999999887776656668889999974   64 456677899999999987643222     222110      


Q ss_pred             --cEEEEEEcCCCCCEEEEE-cCCCcEEEEec
Q psy6415          81 --TVWAAKHLPQNRDLFVTC-GGSGSLNLWQL  109 (174)
Q Consensus        81 --~i~~v~fsP~~~~~las~-s~Dg~V~lWd~  109 (174)
                        .+..++|+|++..+++++ +.++.|.+||.
T Consensus       140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~  171 (353)
T 3vgz_A          140 PLQPRELVADDATNTVYISGIGKESVIWVVDG  171 (353)
T ss_dssp             CCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred             CCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence              268899999766566655 46899999999

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.31  E-value=2.9e-11  Score=95.97  Aligned_cols=99  Identities=11%  Similarity=0.072  Sum_probs=75.8

Q ss_pred             ecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           6 YDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +.++.|.+||+++++...... ....+.+++|+|++   +.|++++.++.|.+||+++.+....+.. ...++.. .+..
T Consensus       161 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~-~~~~  235 (353)
T 3vgz_A          161 GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG---KRLYTTNADGELITIDTADNKILSRKKL-LDDGKEH-FFIN  235 (353)
T ss_dssp             SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT---TEEEEECTTSEEEEEETTTTEEEEEEEC-CCSSSCC-CEEE
T ss_pred             CCCceEEEEcCCCCceEEEecCCCCccceEEECCCC---CEEEEEcCCCeEEEEECCCCeEEEEEEc-CCCCCCc-ccce
Confidence            358999999999998877665 44558889999974   8899999999999999998754322211 0112445 6889


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++|+|++..++++...++.|.+||.
T Consensus       236 ~~~s~dg~~l~~~~~~~~~v~~~d~  260 (353)
T 3vgz_A          236 ISLDTARQRAFITDSKAAEVLVVDT  260 (353)
T ss_dssp             EEEETTTTEEEEEESSSSEEEEEET
T ss_pred             EEECCCCCEEEEEeCCCCEEEEEEC
Confidence            9999976667777777899999999

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.30  E-value=2.5e-11  Score=111.20  Aligned_cols=122  Identities=11%  Similarity=-0.015  Sum_probs=95.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCC-CEEEEEecCCCCCCCEEEEEeCCCcEE-EEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKN-GVCGVDFDRRDIPMNKLVATTLEAKLF-VFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~-~V~sv~f~~~~~~~~~l~s~s~Dg~I~-iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      ||+++ ++.|.+||+.++.......+.. .+..++|+ ++   ..|++++.++.|. +||+.+.+.      ..+..|..
T Consensus       311 la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg---~~l~~~s~~~~l~~~~d~~~~~~------~~l~~~~~  379 (1045)
T 1k32_A          311 IAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TK---VAFIHGTREGDFLGIYDYRTGKA------EKFEENLG  379 (1045)
T ss_dssp             EEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SE---EEEEEEETTEEEEEEEETTTCCE------EECCCCCC
T ss_pred             EEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CC---CeEEEEECCCceEEEEECCCCCc------eEecCCcc
Confidence            56666 7899999999887655444555 78999999 64   7899999888898 999987542      12236667


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .+..++|+| ++..||+++.|+.|++||++                            .         +++...+.+|.
T Consensus       380 -~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~----------------------------t---------g~~~~~~~~~~  420 (1045)
T 1k32_A          380 -NVFAMGVDR-NGKFAVVANDRFEIMTVDLE----------------------------T---------GKPTVIERSRE  420 (1045)
T ss_dssp             -SEEEEEECT-TSSEEEEEETTSEEEEEETT----------------------------T---------CCEEEEEECSS
T ss_pred             -ceeeeEECC-CCCEEEEECCCCeEEEEECC----------------------------C---------CceEEeccCCC
Confidence             899999999 56788999999999999991                            2         23445556889


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      .+|.+++|||||+-
T Consensus       421 ~~v~~~~~SpDG~~  434 (1045)
T 1k32_A          421 AMITDFTISDNSRF  434 (1045)
T ss_dssp             SCCCCEEECTTSCE
T ss_pred             CCccceEECCCCCe
Confidence            99999999999974

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.29  E-value=1e-11  Score=108.37  Aligned_cols=83  Identities=10%  Similarity=0.093  Sum_probs=60.0

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC-----cccccceeeeeecccCc--
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT-----LHREKGFAYLSEKAHKA--   79 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~-----~~~~~~~~~~~~~~h~~--   79 (174)
                      .|++|++||+.+++......+...+.+++|+|++   +.|+++ .|+.|++||+.+     .+..+.    + ..+..  
T Consensus        99 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG---~~la~~-~~~~i~v~~~~~~~~~~g~~~~~----~-~~~~~~~  169 (706)
T 2z3z_A           99 TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVG---DRVAYV-RNHNLYIARGGKLGEGMSRAIAV----T-IDGTETL  169 (706)
T ss_dssp             ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTS---SEEEEE-ETTEEEEEECBCTTSCCCCCEES----C-SCCBTTE
T ss_pred             ECCEEEEEECCCCceEEccCCcccccCCcCCCCC---CEEEEE-ECCeEEEEecCcccccCCCcEEe----c-cCCCCCe
Confidence            4699999999998876655566678889999974   788884 689999999987     543211    1 11212  


Q ss_pred             -----------CcEEEEEEcCCCCCEEEEEc
Q psy6415          80 -----------TTVWAAKHLPQNRDLFVTCG   99 (174)
Q Consensus        80 -----------~~i~~v~fsP~~~~~las~s   99 (174)
                                 ..+.+++|||+ +..||+++
T Consensus       170 ~~g~~~~~ee~~~~~~~~~SpD-g~~la~~~  199 (706)
T 2z3z_A          170 VYGQAVHQREFGIEKGTFWSPK-GSCLAFYR  199 (706)
T ss_dssp             EESSCCGGGCTTCCCSEEECTT-SSEEEEEE
T ss_pred             EcccchhhhhcCCCceEEECCC-CCEEEEEE
Confidence                       01478999995 56778776

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.29  E-value=7.5e-11  Score=94.26  Aligned_cols=95  Identities=12%  Similarity=0.094  Sum_probs=68.0

Q ss_pred             CCcEEEEECCCCCeEEE---eecCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecc-------
Q psy6415           8 NGDLKMFDLKTMSLKWE---TNLKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKA-------   76 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~---~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~-------   76 (174)
                      ++.|++||+.++.....   ..+...+..|+|+|++   +.|++++ .+++|++||+.......  .+..+..       
T Consensus        62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg---~~l~~~~~~~~~v~v~~~~~~g~~~--~~~~~~~~~~~p~~  136 (347)
T 3hfq_A           62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR---QLVYSANYHKGTAEVMKIAADGALT--LTDTVQHSGHGPRP  136 (347)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT---TEEEEEETTTTEEEEEEECTTSCEE--EEEEEECCCCCSST
T ss_pred             CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC---CEEEEEeCCCCEEEEEEeCCCCCee--ecceeecCCCCCCc
Confidence            68999999987764322   2345678899999974   7787777 78999999996321111  1111111       


Q ss_pred             --cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 --HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 --h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                        +.. .+.+++|+|++. +++++..+++|++|++
T Consensus       137 ~~~~~-~~~~~~~spdg~-l~v~~~~~~~v~~~~~  169 (347)
T 3hfq_A          137 EQDGS-HIHYTDLTPDNR-LAVIDLGSDKVYVYNV  169 (347)
T ss_dssp             TCSSC-CEEEEEECTTSC-EEEEETTTTEEEEEEE
T ss_pred             cccCC-CceEEEECCCCc-EEEEeCCCCEEEEEEE
Confidence              122 488999999665 9999999999999999

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.28  E-value=1.3e-11  Score=107.85  Aligned_cols=97  Identities=7%  Similarity=0.004  Sum_probs=66.4

Q ss_pred             EEEEecC---------CcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415           2 VVAGYDN---------GDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF   69 (174)
Q Consensus         2 lasgs~D---------g~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~   69 (174)
                      ||+++.+         +.|.+||+.+++......   +...+.+++|+|++   +.||+++. +.|++||+.+++..+. 
T Consensus        75 l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG---~~la~~~~-~~i~~~~~~~g~~~~~-  149 (723)
T 1xfd_A           75 ALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG---QQLIFIFE-NNIYYCAHVGKQAIRV-  149 (723)
T ss_dssp             EEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST---TCEEEEET-TEEEEESSSSSCCEEE-
T ss_pred             EEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC---CEEEEEEC-CeEEEEECCCCceEEE-
Confidence            6677664         788899999987633222   22348889999974   88998886 7999999988654211 


Q ss_pred             eeeeecccCcCc------------------EEEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415          70 AYLSEKAHKATT------------------VWAAKHLPQNRDLFVTCGGS-GSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~~h~~~~------------------i~~v~fsP~~~~~las~s~D-g~V~lWd~  109 (174)
                          ...+.. .                  +.+++|||+ +..||+++.| +.+++|++
T Consensus       150 ----~~~~~~-~~~~~g~~~~v~~ee~~~~~~~~~~SpD-g~~la~~~~~~~~~~~~~~  202 (723)
T 1xfd_A          150 ----VSTGKE-GVIYNGLSDWLYEEEILKTHIAHWWSPD-GTRLAYAAINDSRVPIMEL  202 (723)
T ss_dssp             ----ECCCBT-TTEEEEECCHHHHHTTSSSSEEEEECTT-SSEEEEEEEECTTSCEEEE
T ss_pred             ----ecCCCC-CceECcccceeEEEEeccCcceEEECCC-CCEEEEEEECCCccceEEe
Confidence                112222 2                  278999995 5667777654 46777776

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.24  E-value=2.2e-11  Score=104.39  Aligned_cols=97  Identities=11%  Similarity=0.002  Sum_probs=78.6

Q ss_pred             EEEEecC----CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC--cEEEEECCCcccccceeeeeec
Q psy6415           2 VVAGYDN----GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA--KLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         2 lasgs~D----g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      ||+++.|    +.|++||+.+++......+...+.+++|+|++   +.|++++.++  .|++||+.+++..      .+.
T Consensus       164 la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~i~~~d~~~~~~~------~~~  234 (582)
T 3o4h_A          164 IAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGM---KVTAGLETAREARLVTVDPRDGSVE------DLE  234 (582)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTS---CEEEEEECSSCEEEEEECTTTCCEE------ECC
T ss_pred             EEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCC---CEEEEccCCCeeEEEEEcCCCCcEE------Ecc
Confidence            6767776    78999999998876555566778999999975   8899888899  8999999886532      234


Q ss_pred             ccCcCcEEEEE--------EcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAK--------HLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~--------fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|.. .+..++        |+|++ .++++++.||+++||++
T Consensus       235 ~~~~-~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          235 LPSK-DFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID  274 (582)
T ss_dssp             CSCS-HHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred             CCCc-ChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence            5655 666666        99966 89999999999999998

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.24  E-value=4.8e-11  Score=104.15  Aligned_cols=96  Identities=14%  Similarity=0.201  Sum_probs=68.4

Q ss_pred             cCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCC-----cEEEEECCCcccccceeeeeecccC
Q psy6415           7 DNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEA-----KLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg-----~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      .+.+|++||+++++.....   .+...+.+++|+|++   +.|++++.|+     .|++||+++++.....  .. ..+.
T Consensus       233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~-~~~~  306 (706)
T 2z3z_A          233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE---NILYVAEVNRAQNECKVNAYDAETGRFVRTL--FV-ETDK  306 (706)
T ss_dssp             CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS---SEEEEEEECTTSCEEEEEEEETTTCCEEEEE--EE-EECS
T ss_pred             CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC---CEEEEEEeCCCCCeeEEEEEECCCCceeeEE--EE-ccCC
Confidence            4578999999998765433   234568999999974   8888887775     9999999986322111  11 1122


Q ss_pred             c--CcEEEEEEcC--CCCCEEEEEcCCCcEEEEec
Q psy6415          79 A--TTVWAAKHLP--QNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~--~~i~~v~fsP--~~~~~las~s~Dg~V~lWd~  109 (174)
                      .  ..+.+++|+|  ++ .++++++.||.++||++
T Consensus       307 ~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~  340 (706)
T 2z3z_A          307 HYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLY  340 (706)
T ss_dssp             SCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEE
T ss_pred             CeECccCCceeecCCCC-EEEEEEccCCccEEEEE
Confidence            1  0246789999  65 48899999999999998

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.23  E-value=1e-10  Score=91.95  Aligned_cols=95  Identities=16%  Similarity=0.149  Sum_probs=69.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCC------CEEEEEecCCCCCCCEEEEEe------------CCCcEEEEECCCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKN------GVCGVDFDRRDIPMNKLVATT------------LEAKLFVFDLKTL   63 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~------~V~sv~f~~~~~~~~~l~s~s------------~Dg~I~iWD~~~~   63 (174)
                      +++++.++.|.+||+.+++.........      .+.+++|+|++   +.|++++            .++.|++||+.+.
T Consensus        49 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~  125 (337)
T 1pby_B           49 YATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG---KTLAIYESPVRLELTHFEVQPTRVALYDAETL  125 (337)
T ss_dssp             EEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS---SEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred             EEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC---CEEEEEecccccccccccccCceEEEEECCCC
Confidence            4667778999999999998765544322      57789999974   7888775            6899999999876


Q ss_pred             ccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          64 HREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        64 ~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +...     .+.. .. .+..++|+|++..+ +++  ++.|++||+
T Consensus       126 ~~~~-----~~~~-~~-~~~~~~~s~dg~~l-~~~--~~~i~~~d~  161 (337)
T 1pby_B          126 SRRK-----AFEA-PR-QITMLAWARDGSKL-YGL--GRDLHVMDP  161 (337)
T ss_dssp             EEEE-----EEEC-CS-SCCCEEECTTSSCE-EEE--SSSEEEEET
T ss_pred             cEEE-----EEeC-CC-CcceeEECCCCCEE-EEe--CCeEEEEEC
Confidence            5332     2222 33 57789999965544 445  689999999

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.19  E-value=8.1e-11  Score=103.15  Aligned_cols=89  Identities=13%  Similarity=0.093  Sum_probs=62.7

Q ss_pred             EEEEecCCcEEEEECCCC---CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTM---SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~---~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      |++++. ++|++||+.++   .......+...+..++|+|++   +.|++++. +.|++||+.+.+....     ...+.
T Consensus       123 l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG---~~la~~~~-~~i~~~d~~~g~~~~~-----~~~~~  192 (741)
T 2ecf_A          123 LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG---GFVSFIRG-RNLWVIDLASGRQMQL-----TADGS  192 (741)
T ss_dssp             EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS---SEEEEEET-TEEEEEETTTTEEEEC-----CCCCC
T ss_pred             EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC---CEEEEEeC-CcEEEEecCCCCEEEe-----ccCCc
Confidence            566665 99999999988   654444456779999999974   88888874 6999999988643211     11222


Q ss_pred             cCc----------------EEEEEEcCCCCCEEEEEcCCC
Q psy6415          79 ATT----------------VWAAKHLPQNRDLFVTCGGSG  102 (174)
Q Consensus        79 ~~~----------------i~~v~fsP~~~~~las~s~Dg  102 (174)
                      . .                +.+++|||+ +..||+++.|+
T Consensus       193 ~-~~~~g~~~~v~~~~~~~~~~~~~SpD-g~~l~~~~~d~  230 (741)
T 2ecf_A          193 T-TIGNGIAEFVADEEMDRHTGYWWAPD-DSAIAYARIDE  230 (741)
T ss_dssp             S-SEEESCCCHHHHHHSCCCCSEEECTT-SSCEEEEEEEC
T ss_pred             c-ceeccccceeeeeccccccceEECCC-CCEEEEEEEcC
Confidence            1 1                477999995 45667776665

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.16  E-value=7e-10  Score=89.16  Aligned_cols=103  Identities=11%  Similarity=0.070  Sum_probs=65.6

Q ss_pred             EEEEecCCcEEEEECCCCCeE----EEeec-----------CCCEEEEEecCCCCCCCEEEE-EeCCCcEEEEECCCccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLK----WETNL-----------KNGVCGVDFDRRDIPMNKLVA-TTLEAKLFVFDLKTLHR   65 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~----~~~~~-----------~~~V~sv~f~~~~~~~~~l~s-~s~Dg~I~iWD~~~~~~   65 (174)
                      +++...+++|.+||+......    ....+           ...+.+++|+|++   +.|++ ...++.|++|++.....
T Consensus       113 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~v~v~~~~~~~~  189 (361)
T 3scy_A          113 VTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG---KYLLADDLGTDQIHKFNINPNAN  189 (361)
T ss_dssp             EEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTCC
T ss_pred             EEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC---CEEEEEeCCCCEEEEEEEcCCCC
Confidence            344557899999999754321    11111           1235889999974   65654 45689999999876431


Q ss_pred             ------ccce---eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          66 ------EKGF---AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        66 ------~~~~---~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                            ....   ..... .+.. ....++|+|++..+++++..+++|.+||+
T Consensus       190 ~~~~~~l~~~~~~~~~~~-~~~~-~~~~~~~spdg~~l~v~~~~~~~v~v~~~  240 (361)
T 3scy_A          190 ADNKEKFLTKGTPEAFKV-APGS-GPRHLIFNSDGKFAYLINEIGGTVIAFRY  240 (361)
T ss_dssp             TTTCCCCEEEEEEEEEEC-CTTC-CEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred             cccccceeecccccceec-CCCC-CCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence                  1000   01111 2334 67899999965545566667999999999

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.14  E-value=1.9e-09  Score=87.41  Aligned_cols=96  Identities=16%  Similarity=0.134  Sum_probs=66.1

Q ss_pred             cCCcEEEEECC-CCCeEEEee-----cCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECC-Ccccccceeeeeec--c
Q psy6415           7 DNGDLKMFDLK-TMSLKWETN-----LKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLK-TLHREKGFAYLSEK--A   76 (174)
Q Consensus         7 ~Dg~iklWDl~-~~~~~~~~~-----~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~-~~~~~~~~~~~~~~--~   76 (174)
                      .+|++++|+++ .+++.....     +...+.+++|+|++   +.|+++. .++.|++||+. +++..   ....+.  .
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG---~~l~~~~~~~~~v~~~~~~~~g~~~---~~~~~~~~~  190 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE---TYLYSADLTANKLWTHRKLASGEVE---LVGSVDAPD  190 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTSCEE---EEEEEECSS
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC---CEEEEEcCCCCEEEEEEECCCCCEE---EeeeEecCC
Confidence            68999999997 465543222     34579999999974   7777665 47899999998 54321   111222  2


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |.. .+..++|+|++..++++...+++|.+|++
T Consensus       191 ~g~-~p~~~~~spdg~~l~v~~~~~~~v~v~~~  222 (365)
T 1jof_A          191 PGD-HPRWVAMHPTGNYLYALMEAGNRICEYVI  222 (365)
T ss_dssp             TTC-CEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CCC-CCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence            345 68999999965444444455889999998

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.12  E-value=3.1e-10  Score=92.07  Aligned_cols=101  Identities=14%  Similarity=0.086  Sum_probs=65.9

Q ss_pred             EEEEecCCcEEEEECC-CCCeEEEeec--CCCEEEEEecCCCCCCCE--EEEEe-------------CCCcEEEEECCC-
Q psy6415           2 VVAGYDNGDLKMFDLK-TMSLKWETNL--KNGVCGVDFDRRDIPMNK--LVATT-------------LEAKLFVFDLKT-   62 (174)
Q Consensus         2 lasgs~Dg~iklWDl~-~~~~~~~~~~--~~~V~sv~f~~~~~~~~~--l~s~s-------------~Dg~I~iWD~~~-   62 (174)
                      |++++.+ +|.+||+. ++++.....+  ...++.++|+|++   +.  +++++             .++++++|++.. 
T Consensus        54 l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg---~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~  129 (365)
T 1jof_A           54 IYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNT---RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET  129 (365)
T ss_dssp             EEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCC---EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT
T ss_pred             EEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCC---CEEEEEEecCCcceeccceeecCCceEEEEccCCC
Confidence            6677777 99999997 7766433222  1335668999974   63  44553             699999999974 


Q ss_pred             cccccceeeeeec-ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          63 LHREKGFAYLSEK-AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        63 ~~~~~~~~~~~~~-~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++....  +..+. .+.. .+.+++|+|++..++++...+++|++||+
T Consensus       130 g~~~~~--~~~~~~~~~~-~~~~~~~spdG~~l~~~~~~~~~v~~~~~  174 (365)
T 1jof_A          130 GKLEKN--VQNYEYQENT-GIHGMVFDPTETYLYSADLTANKLWTHRK  174 (365)
T ss_dssp             CCEEEE--EEEEECCTTC-CEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CcCcce--EeeEEeCCCC-cceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence            332111  11111 2344 78999999965445444556789999999

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.07  E-value=1.7e-09  Score=89.97  Aligned_cols=89  Identities=18%  Similarity=0.134  Sum_probs=69.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |+++ .++.|++||+++...... ..+...|.++.+.+     ..+++++.||+|.+||+.+....         .+.. 
T Consensus       100 L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~-----p~~av~~~dG~L~v~dl~~~~~~---------~~~~-  163 (388)
T 1xip_A          100 VLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVN-----NTLVILNSVNDLSALDLRTKSTK---------QLAQ-  163 (388)
T ss_dssp             EEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECS-----SEEEEEETTSEEEEEETTTCCEE---------EEEE-
T ss_pred             EEEE-cCCcEEEEEchhhhccCccceeecceeeEEecC-----CCEEEEECCCCEEEEEccCCccc---------cccC-
Confidence            5666 889999999987654332 34567788888776     34999999999999999875421         1334 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|.+++|||++   ++.|..||+|++|+.
T Consensus       164 ~Vs~v~WSpkG---~~vg~~dg~i~~~~~  189 (388)
T 1xip_A          164 NVTSFDVTNSQ---LAVLLKDRSFQSFAW  189 (388)
T ss_dssp             SEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred             CceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence            79999999954   577999999999988

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.04  E-value=1.5e-09  Score=85.80  Aligned_cols=99  Identities=18%  Similarity=0.212  Sum_probs=69.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCC-------CEEEEEecCCCCCCCEEEEEeCC------------CcEEEEECCC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKN-------GVCGVDFDRRDIPMNKLVATTLE------------AKLFVFDLKT   62 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~-------~V~sv~f~~~~~~~~~l~s~s~D------------g~I~iWD~~~   62 (174)
                      ++++..++.|.+||+++++.........       .+..++|+|++   +.|++++.+            +.|.+||+++
T Consensus        58 ~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~  134 (349)
T 1jmx_B           58 YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG---KEVYATVNPTQRLNDHYVVKPPRLEVFSTAD  134 (349)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS---SEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred             EEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC---CEEEEEcccccccccccccCCCeEEEEECCC
Confidence            3566778999999999988765544322       27789999974   788888765            9999999987


Q ss_pred             cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .+....  .... .+.. .+.+++|+|++. +++ ++.  .|++||+++
T Consensus       135 ~~~~~~--~~~~-~~~~-~~~~~~~s~dg~-l~~-~~~--~i~~~d~~~  175 (349)
T 1jmx_B          135 GLEAKP--VRTF-PMPR-QVYLMRAADDGS-LYV-AGP--DIYKMDVKT  175 (349)
T ss_dssp             GGGBCC--SEEE-ECCS-SCCCEEECTTSC-EEE-ESS--SEEEECTTT
T ss_pred             ccccce--eeec-cCCC-cccceeECCCCc-EEE-ccC--cEEEEeCCC
Confidence            543221  1122 2334 688999999655 666 444  499999943

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.01  E-value=1.4e-09  Score=94.22  Aligned_cols=97  Identities=11%  Similarity=-0.108  Sum_probs=65.6

Q ss_pred             EEEEec-CCcEEEEECC--C-CCeEEEee-----cCCCEEEEEecCCCCCCCEEEEEeCC----------CcEEEEECCC
Q psy6415           2 VVAGYD-NGDLKMFDLK--T-MSLKWETN-----LKNGVCGVDFDRRDIPMNKLVATTLE----------AKLFVFDLKT   62 (174)
Q Consensus         2 lasgs~-Dg~iklWDl~--~-~~~~~~~~-----~~~~V~sv~f~~~~~~~~~l~s~s~D----------g~I~iWD~~~   62 (174)
                      ||..+. +..|.+||+.  + +.......     +...+.+++|+|++   +.|++++.|          ..|++||+.+
T Consensus        94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg---~~l~~~~~~~~~~~~~~~~~~i~~~~~~~  170 (662)
T 3azo_A           94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPER---GEVWCMAEEFTGEGPSDVRRFLAAVPLDG  170 (662)
T ss_dssp             EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTT---TEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred             EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCC---CEEEEEEecccCCCCCCceeEEEEEECCC
Confidence            444433 5667777776  3 54433222     33458899999975   889988877          6899999987


Q ss_pred             ------cccccceeeeeec-ccCcCcEEEEEEcCCCCCEEEEEcCC--------CcEEEEec
Q psy6415          63 ------LHREKGFAYLSEK-AHKATTVWAAKHLPQNRDLFVTCGGS--------GSLNLWQL  109 (174)
Q Consensus        63 ------~~~~~~~~~~~~~-~h~~~~i~~v~fsP~~~~~las~s~D--------g~V~lWd~  109 (174)
                            .+.      ..+. .+.. .+..++|||+ +..||.++.+        ..|++||+
T Consensus       171 ~~~~~~~~~------~~l~~~~~~-~~~~~~~SpD-G~~la~~~~~~~~~~~~~~~i~~~d~  224 (662)
T 3azo_A          171 SAAADRSAV------RELSDDAHR-FVTGPRLSPD-GRQAVWLAWDHPRMPWEGTELKTARV  224 (662)
T ss_dssp             TTTTCGGGS------EESSCSCSS-EECCCEECTT-SSEEEEEEECTTCCTTTCEEEEEEEE
T ss_pred             CccccCCce------eEEEecCCC-cccCceECCC-CCEEEEEECCCCCCCCCCcEEEEEEE
Confidence                  432      1223 4445 7888999995 5667766655        37999999

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=98.99  E-value=2.2e-09  Score=94.96  Aligned_cols=98  Identities=14%  Similarity=0.174  Sum_probs=68.9

Q ss_pred             EEEEecC---------CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           2 VVAGYDN---------GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         2 lasgs~D---------g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      |+.++.+         +.+.+||+.++++.....+...+..++|||++   +.||.++ |+.|++||+.+++..+    .
T Consensus        76 l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG---~~la~~~-~~~i~~~~~~~~~~~~----l  147 (740)
T 4a5s_A           76 ILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVG---HKLAYVW-NNDIYVKIEPNLPSYR----I  147 (740)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSST---TCEEEEE-TTEEEEESSTTSCCEE----C
T ss_pred             EEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCC---CEEEEEE-CCeEEEEECCCCceEE----E
Confidence            5666665         56679999999876544456779999999985   8888885 6899999998765321    1


Q ss_pred             eecccCcCcE-----------------EEEEEcCCCCCEEEEEcCCCc-EEEEec
Q psy6415          73 SEKAHKATTV-----------------WAAKHLPQNRDLFVTCGGSGS-LNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i-----------------~~v~fsP~~~~~las~s~Dg~-V~lWd~  109 (174)
                      +..++.. .+                 ..++|||+ +..||.++.|.+ |++|++
T Consensus       148 t~~g~~~-~~~~g~~~~v~~ee~~~~~~~~~wSpD-g~~la~~~~d~~~v~~~~~  200 (740)
T 4a5s_A          148 TWTGKED-IIYNGITDWVYEEEVFSAYSALWWSPN-GTFLAYAQFNDTEVPLIEY  200 (740)
T ss_dssp             CSCCBTT-TEEESBCCHHHHHHTSSSSBCEEECTT-SSEEEEEEEECTTCCEEEE
T ss_pred             cCCCCcc-ceecCcccccccchhcCCCcceEECCC-CCEEEEEEEcccCCceEEE
Confidence            1122222 22                 24899995 567788776655 999988

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.96  E-value=3.1e-09  Score=88.42  Aligned_cols=92  Identities=20%  Similarity=0.335  Sum_probs=66.5

Q ss_pred             CEEEEecCCcEEEEECCCCC-----------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415           1 MVVAGYDNGDLKMFDLKTMS-----------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF   69 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~-----------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~   69 (174)
                      ++++|+.| .+++|+++...           ......+.. |+.|+|  +   ++.|+++ .++.|++||+++....   
T Consensus        51 ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d---~~~L~v~-~~~~l~v~dv~sl~~~---  119 (388)
T 1xip_A           51 LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--H---GDQVLVS-TRNALYSLDLEELSEF---  119 (388)
T ss_dssp             EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--E---TTEEEEE-ESSEEEEEESSSTTCE---
T ss_pred             EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--C---CCEEEEE-cCCcEEEEEchhhhcc---
Confidence            36777776 56679865332           112334456 999999  4   3888888 8899999999886522   


Q ss_pred             eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                        .....|+. .+.++.+.+.  . ||.++.||+|.+||+
T Consensus       120 --~~~~~~~~-~v~~i~~~~p--~-~av~~~dG~L~v~dl  153 (388)
T 1xip_A          120 --RTVTSFEK-PVFQLKNVNN--T-LVILNSVNDLSALDL  153 (388)
T ss_dssp             --EEEEECSS-CEEEEEECSS--E-EEEEETTSEEEEEET
T ss_pred             --Cccceeec-ceeeEEecCC--C-EEEEECCCCEEEEEc
Confidence              12346667 8889888763  2 888999999999999

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.92  E-value=6e-09  Score=90.23  Aligned_cols=101  Identities=14%  Similarity=0.084  Sum_probs=70.1

Q ss_pred             EEEEecC----------CcEEEEECCC------CCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCC--------CcEE
Q psy6415           2 VVAGYDN----------GDLKMFDLKT------MSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLE--------AKLF   56 (174)
Q Consensus         2 lasgs~D----------g~iklWDl~~------~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~D--------g~I~   56 (174)
                      |++++.|          .+|++||+.+      +...... .+...+.+++|+|++   +.|+.++.+        ..|+
T Consensus       144 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG---~~la~~~~~~~~~~~~~~~i~  220 (662)
T 3azo_A          144 VWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDG---RQAVWLAWDHPRMPWEGTELK  220 (662)
T ss_dssp             EEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTS---SEEEEEEECTTCCTTTCEEEE
T ss_pred             EEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCC---CEEEEEECCCCCCCCCCcEEE
Confidence            5666666          5899999988      6654444 445567889999974   889877754        4799


Q ss_pred             EEECC-CcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          57 VFDLK-TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        57 iWD~~-~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +||+. ++....  .......|.. .+.+++|+|++. ++++++.||..+||.+
T Consensus       221 ~~d~~~~g~~~~--~~~l~~~~~~-~~~~~~~spdg~-l~~~~~~~~~~~l~~~  270 (662)
T 3azo_A          221 TARVTEDGRFAD--TRTLLGGPEE-AIAQAEWAPDGS-LIVATDRTGWWNLHRV  270 (662)
T ss_dssp             EEEECTTSCEEE--EEEEEEETTB-CEEEEEECTTSC-EEEEECTTSSCEEEEE
T ss_pred             EEEECCCCcccc--cEEeCCCCCc-eEcceEECCCCe-EEEEECCCCCeEEEEE
Confidence            99998 441000  0111224456 899999999655 8889999996566555

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=98.91  E-value=1.9e-08  Score=79.36  Aligned_cols=96  Identities=15%  Similarity=0.183  Sum_probs=72.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecC--CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc-
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLK--NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH-   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~--~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h-   77 (174)
                      +|++++.|+.|.+||.++|+.++.....  ..++++++.|++   +.|+  +.++.|+.||. +++.+     ..+..+ 
T Consensus         7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG---~ilv--s~~~~V~~~d~-~G~~~-----W~~~~~~   75 (276)
T 3no2_A            7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG---EILF--SYSKGAKMITR-DGREL-----WNIAAPA   75 (276)
T ss_dssp             EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS---CEEE--ECBSEEEEECT-TSCEE-----EEEECCT
T ss_pred             EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC---CEEE--eCCCCEEEECC-CCCEE-----EEEcCCC
Confidence            4789999999999999999998887644  368999999974   7777  46888999998 55432     233333 


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~  109 (174)
                      .. .+.++++.|+ +.++++.+. +++|..+|.
T Consensus        76 ~~-~~~~~~~~~d-G~~lv~~~~~~~~v~~vd~  106 (276)
T 3no2_A           76 GC-EMQTARILPD-GNALVAWCGHPSTILEVNM  106 (276)
T ss_dssp             TC-EEEEEEECTT-SCEEEEEESTTEEEEEECT
T ss_pred             Cc-cccccEECCC-CCEEEEecCCCCEEEEEeC
Confidence            34 7899999994 567777766 777766665

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=98.89  E-value=6e-08  Score=75.29  Aligned_cols=96  Identities=8%  Similarity=0.059  Sum_probs=68.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee---cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec--c
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN---LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK--A   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~---~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~--~   76 (174)
                      +++...++.|.+||.. ++......   ....+++|+++|++   +.+++.+.++.|++||.....      +..+.  +
T Consensus       135 ~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~g~~------~~~~~~~g  204 (286)
T 1q7f_A          135 IVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQ---EIFISDNRAHCVKVFNYEGQY------LRQIGGEG  204 (286)
T ss_dssp             EEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSS---EEEEEEGGGTEEEEEETTCCE------EEEESCTT
T ss_pred             EEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCC---CEEEEECCCCEEEEEcCCCCE------EEEEccCC
Confidence            4566678899999975 44443332   23468999999964   677777889999999985421      11222  2


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCC-cEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSG-SLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg-~V~lWd~  109 (174)
                      +.. ....++++|+ +.++++...++ .|++||.
T Consensus       205 ~~~-~p~~i~~d~~-G~l~v~~~~~~~~i~~~~~  236 (286)
T 1q7f_A          205 ITN-YPIGVGINSN-GEILIADNHNNFNLTIFTQ  236 (286)
T ss_dssp             TSC-SEEEEEECTT-CCEEEEECSSSCEEEEECT
T ss_pred             ccC-CCcEEEECCC-CCEEEEeCCCCEEEEEECC
Confidence            234 6889999995 57889888886 9999998

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=98.84  E-value=2e-07  Score=74.46  Aligned_cols=97  Identities=14%  Similarity=0.129  Sum_probs=69.8

Q ss_pred             CcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-cccceeee----eecccCcCc
Q psy6415           9 GDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REKGFAYL----SEKAHKATT   81 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~~~~~~----~~~~h~~~~   81 (174)
                      ++|.+||..++++.....  .-.....|+++|++   +.+++.+.++.|++||..... .+..+...    .-..+-. .
T Consensus        69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g---~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~-~  144 (329)
T 3fvz_A           69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG---NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC-Q  144 (329)
T ss_dssp             CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS---CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS-S
T ss_pred             CcEEEEECCCCeEEeccCCCccCCceEEEECCCC---CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccC-C
Confidence            589999999888765543  22468999999974   788888899999999987542 11111000    0023334 5


Q ss_pred             EEEEEEcCCCCCEEEEEc-CCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCG-GSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s-~Dg~V~lWd~  109 (174)
                      .+.|+|+|+++.++++.+ .+++|++||.
T Consensus       145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~~  173 (329)
T 3fvz_A          145 PTDVAVEPSTGAVFVSDGYCNSRIVQFSP  173 (329)
T ss_dssp             EEEEEECTTTCCEEEEECSSCCEEEEECT
T ss_pred             CcEEEEeCCCCeEEEEeCCCCCeEEEEcC
Confidence            789999996678889887 7999999997

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.79  E-value=8.5e-08  Score=75.02  Aligned_cols=89  Identities=9%  Similarity=-0.040  Sum_probs=61.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc-CcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH-KAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h-~~~   80 (174)
                      ++++..++.|..||..++ ..........+.+++++|++   +.+++...++.|.+||.++++... + ....... .. 
T Consensus        43 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg---~l~v~~~~~~~i~~~d~~~g~~~~-~-~~~~~~~~~~-  115 (296)
T 3e5z_A           43 IFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQG---HLIACSHGLRRLERQREPGGEWES-I-ADSFEGKKLN-  115 (296)
T ss_dssp             EEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTC---CEEEEETTTTEEEEECSTTCCEEE-E-ECEETTEECC-
T ss_pred             EEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCC---cEEEEecCCCeEEEEcCCCCcEEE-E-eeccCCCCCC-
Confidence            678888999999999988 43333345668999999974   777777778999999997654321 1 0011111 12 


Q ss_pred             cEEEEEEcCCCCCEEEEE
Q psy6415          81 TVWAAKHLPQNRDLFVTC   98 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~   98 (174)
                      .++.+++.|+ +.+++|.
T Consensus       116 ~~~~i~~d~~-G~l~vtd  132 (296)
T 3e5z_A          116 SPNDVCLAPD-GSLWFSD  132 (296)
T ss_dssp             CCCCEEECTT-SCEEEEE
T ss_pred             CCCCEEECCC-CCEEEEC
Confidence            4678999994 5688874

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.79  E-value=2.7e-07  Score=73.00  Aligned_cols=91  Identities=8%  Similarity=0.034  Sum_probs=64.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCC----CcEEEEECCCcccccceeeeeecc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLE----AKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~D----g~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      ++++..++.|.+||+++++..... .....+.+++++|++   +.++++..+    +.|.+||.++..... + . ....
T Consensus        59 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg---~l~v~~~~~~~~~~~i~~~d~~~~~~~~-~-~-~~~~  132 (333)
T 2dg1_A           59 FLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATENGDNLQD-I-I-EDLS  132 (333)
T ss_dssp             EEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS---CEEEEECTTSSSCCEEEEECTTSCSCEE-E-E-CSSS
T ss_pred             EEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC---cEEEEeCCCCCCCceEEEEeCCCCEEEE-E-E-ccCc
Confidence            456778899999999988865443 345679999999974   677777666    689999998754221 1 0 1012


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcC
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGG  100 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~  100 (174)
                      +.. .++.++++|+ +.++++...
T Consensus       133 ~~~-~~~~i~~d~~-g~l~v~~~~  154 (333)
T 2dg1_A          133 TAY-CIDDMVFDSK-GGFYFTDFR  154 (333)
T ss_dssp             SCC-CEEEEEECTT-SCEEEEECC
T ss_pred             cCC-cccceEECCC-CCEEEEecc
Confidence            334 7899999995 567776654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.78  E-value=3.1e-08  Score=79.77  Aligned_cols=85  Identities=19%  Similarity=0.124  Sum_probs=56.2

Q ss_pred             EEEEec-CCc--EEEEECCCCCeEEEeecC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYD-NGD--LKMFDLKTMSLKWETNLK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~-Dg~--iklWDl~~~~~~~~~~~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      ||.++. +|.  |.+||+.+++........ ..+.+++|+|++   +.|+.++.++.|++||+.+.+...   +  ...+
T Consensus        50 l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg---~~l~~~~~~~~l~~~d~~~g~~~~---~--~~~~  121 (388)
T 3pe7_A           50 LLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD---DALFYVKDGRNLMRVDLATLEENV---V--YQVP  121 (388)
T ss_dssp             EEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS---SEEEEEETTTEEEEEETTTCCEEE---E--EECC
T ss_pred             EEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC---CEEEEEeCCCeEEEEECCCCccee---e--eech
Confidence            566666 674  888899988876544333 334467899974   899999999999999999875432   1  1233


Q ss_pred             CcCcEEEE--EEcCCCCCEEE
Q psy6415          78 KATTVWAA--KHLPQNRDLFV   96 (174)
Q Consensus        78 ~~~~i~~v--~fsP~~~~~la   96 (174)
                      .. .+...  .++|+ +..++
T Consensus       122 ~~-~~~~~~~~~~~d-g~~l~  140 (388)
T 3pe7_A          122 AE-WVGYGTWVANSD-CTKLV  140 (388)
T ss_dssp             TT-EEEEEEEEECTT-SSEEE
T ss_pred             hh-cccccceeECCC-CCeec
Confidence            33 44333  34884 45665

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=98.78  E-value=3.9e-07  Score=70.62  Aligned_cols=92  Identities=10%  Similarity=0.183  Sum_probs=66.5

Q ss_pred             CCcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      ++.|++|| .+++......  ....+.+|+++|++   +.+++.+.++.|++||..... ...+   ....+.. .++.+
T Consensus        99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~g~~-~~~~---~~~~~~~-~p~~i  169 (286)
T 1q7f_A           99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKG---RIIVVECKVMRVIIFDQNGNV-LHKF---GCSKHLE-FPNGV  169 (286)
T ss_dssp             GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTS---CEEEEETTTTEEEEECTTSCE-EEEE---ECTTTCS-SEEEE
T ss_pred             CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCC---CEEEEECCCCEEEEEcCCCCE-EEEe---CCCCccC-CcEEE
Confidence            89999999 4555554443  23568999999964   777888889999999975421 1111   1113334 68999


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +++|+ +.++++.+.++.|++||.
T Consensus       170 ~~~~~-g~l~v~~~~~~~i~~~~~  192 (286)
T 1q7f_A          170 VVNDK-QEIFISDNRAHCVKVFNY  192 (286)
T ss_dssp             EECSS-SEEEEEEGGGTEEEEEET
T ss_pred             EECCC-CCEEEEECCCCEEEEEcC
Confidence            99994 568898888999999998

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.76  E-value=2.1e-07  Score=74.77  Aligned_cols=97  Identities=18%  Similarity=0.072  Sum_probs=63.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCC-EEEEE--ecCCCCCCCEEEEE----------------------eCCCcEE
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNG-VCGVD--FDRRDIPMNKLVAT----------------------TLEAKLF   56 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~-V~sv~--f~~~~~~~~~l~s~----------------------s~Dg~I~   56 (174)
                      |+.++.++.|++||+.+++.......... +....  ++|++   ..++..                      +.+..|.
T Consensus        95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  171 (388)
T 3pe7_A           95 LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC---TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM  171 (388)
T ss_dssp             EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS---SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred             EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCC---CeeccccccCcccccccccchhhhhhccCCcceEE
Confidence            67888889999999999987654443333 33333  47763   666532                      3457899


Q ss_pred             EEECCCcccccceeeeeecccCcCcEEEEEEcC-CCCCEEEEEcCC------CcEEEEec
Q psy6415          57 VFDLKTLHREKGFAYLSEKAHKATTVWAAKHLP-QNRDLFVTCGGS------GSLNLWQL  109 (174)
Q Consensus        57 iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP-~~~~~las~s~D------g~V~lWd~  109 (174)
                      +||+.+++..      .+..+.. .+..++|+| ++ ..||.++.+      ..|.++|.
T Consensus       172 ~~d~~~g~~~------~l~~~~~-~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~  223 (388)
T 3pe7_A          172 RVDLKTGEST------VILQENQ-WLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINE  223 (388)
T ss_dssp             EEETTTCCEE------EEEEESS-CEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEET
T ss_pred             EEECCCCceE------EeecCCc-cccccEECCCCC-CEEEEEEecCCCCCcceEEEEeC
Confidence            9999986522      2234555 789999999 65 455555543      36666666

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.76  E-value=3.1e-07  Score=79.71  Aligned_cols=98  Identities=12%  Similarity=0.005  Sum_probs=77.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC--CcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK--TLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~--~~~~~~~~~~~~~~~h~~   79 (174)
                      +++...+++|.++|..+++++........+..+.|+|++   +++.+++.|+.|.+||+.  +.+..     .++.... 
T Consensus       170 ~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG---r~lyv~~~dg~V~viD~~~~t~~~v-----~~i~~G~-  240 (567)
T 1qks_A          170 SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG---RYLFVIGRDGKVNMIDLWMKEPTTV-----AEIKIGS-  240 (567)
T ss_dssp             EEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS---CEEEEEETTSEEEEEETTSSSCCEE-----EEEECCS-
T ss_pred             EEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCC---CEEEEEcCCCeEEEEECCCCCCcEe-----EEEecCC-
Confidence            567788999999999999988777666678899999974   888889999999999996  44322     2333322 


Q ss_pred             CcEEEEEEc----CCCCCEEEEEcCCCcEEEEec
Q psy6415          80 TTVWAAKHL----PQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fs----P~~~~~las~s~Dg~V~lWd~  109 (174)
                       .-..++|+    |++..++++.-.+++|.++|.
T Consensus       241 -~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~  273 (567)
T 1qks_A          241 -EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG  273 (567)
T ss_dssp             -EEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred             -CCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence             35789999    677667777777899999998

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.75  E-value=2e-07  Score=75.89  Aligned_cols=121  Identities=17%  Similarity=0.191  Sum_probs=77.4

Q ss_pred             EEecCCcEEEEECCCCCeEEE--eec-----------CCCEEEEEecCCCCCCCEEEEE-e----------CCCcEEEEE
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWE--TNL-----------KNGVCGVDFDRRDIPMNKLVAT-T----------LEAKLFVFD   59 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~--~~~-----------~~~V~sv~f~~~~~~~~~l~s~-s----------~Dg~I~iWD   59 (174)
                      ..+.+++|.++|+........  ...           ..+...++|+|++   +.+..+ +          ..++|.+||
T Consensus       216 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg---~~lyv~~~~~~~~~~~~~~~~~v~viD  292 (361)
T 2oiz_A          216 FVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS---GRMYVFMHPDGKEGTHKFPAAEIWVMD  292 (361)
T ss_dssp             EEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT---TEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred             EEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC---CeEEEEEccCCCcccccCCCceEEEEE
Confidence            345678899999876543211  100           1122237899974   555443 3          135899999


Q ss_pred             CCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCC
Q psy6415          60 LKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDID  139 (174)
Q Consensus        60 ~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  139 (174)
                      +++.+.+     .++..+.   .++++|+|++. .|++++. ++|.+||.+                            .
T Consensus       293 ~~t~~~v-----~~i~~~~---p~~ia~spdg~-~l~v~n~-~~v~v~D~~----------------------------t  334 (361)
T 2oiz_A          293 TKTKQRV-----ARIPGRD---ALSMTIDQQRN-LMLTLDG-GNVNVYDIS----------------------------Q  334 (361)
T ss_dssp             TTTTEEE-----EEEECTT---CCEEEEETTTT-EEEEECS-SCEEEEECS----------------------------S
T ss_pred             CCCCcEE-----EEEecCC---eeEEEECCCCC-EEEEeCC-CeEEEEECC----------------------------C
Confidence            9987543     2333432   78999999654 6666666 999999991                            1


Q ss_pred             CCccccccccceeeeeeccccceeeeeeCCCCC
Q psy6415         140 DIPMGVPGSLTLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       140 g~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      |       ..+++.++..+...-+.|.|+|||.
T Consensus       335 ~-------~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          335 P-------EPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             S-------SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             C-------cceeeEEeccCCCCcEEEEecCCCC
Confidence            1       1156777655555568899999985

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=98.73  E-value=4.1e-07  Score=72.67  Aligned_cols=99  Identities=12%  Similarity=0.027  Sum_probs=66.3

Q ss_pred             EEEEe-cCCcEEEEECCCCCeEEEeec-C----------CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce
Q psy6415           2 VVAGY-DNGDLKMFDLKTMSLKWETNL-K----------NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF   69 (174)
Q Consensus         2 lasgs-~Dg~iklWDl~~~~~~~~~~~-~----------~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~   69 (174)
                      +++.+ .++.|++||. .+........ .          ....+|+++|+.  ++.+++...++.|++||..+++.+..+
T Consensus       158 yv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~--g~l~v~d~~~~~I~~~~~~~G~~~~~~  234 (329)
T 3fvz_A          158 FVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHL--DQLCVADRENGRIQCFKTDTKEFVREI  234 (329)
T ss_dssp             EEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTT--TEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCC--CEEEEEECCCCEEEEEECCCCcEEEEE
Confidence            45554 6899999995 4555444321 1          238899999963  367788889999999999865533221


Q ss_pred             eeeeecccCcCcEEEEEEcCCCCCEEEEE-------cCCCcEEEEec
Q psy6415          70 AYLSEKAHKATTVWAAKHLPQNRDLFVTC-------GGSGSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~-------s~Dg~V~lWd~  109 (174)
                         ....+.. .+++++|+|  +.++++.       +.+.+|++||+
T Consensus       235 ---~~~~~~~-~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~  275 (329)
T 3fvz_A          235 ---KHASFGR-NVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNF  275 (329)
T ss_dssp             ---CCTTTTT-CEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEET
T ss_pred             ---eccccCC-CcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEc
Confidence               1124555 789999999  3344443       34458999998

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.70  E-value=1.3e-07  Score=75.13  Aligned_cols=76  Identities=13%  Similarity=0.182  Sum_probs=52.0

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---C--cEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---A--KLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g--~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      ++.|.+||+.+++....    ..+.+++|+|++   +.||.++.+   +  .|.+||+.+++...      +..+ . .+
T Consensus        42 ~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg---~~la~~~~~~~~~~~~l~~~~~~~g~~~~------l~~~-~-~~  106 (347)
T 2gop_A           42 ENTIVIENLKNNARRFI----ENATMPRISPDG---KKIAFMRANEEKKVSEIWVADLETLSSKK------ILEA-K-NI  106 (347)
T ss_dssp             EEEEEEEETTTCCEEEE----ESCEEEEECTTS---SEEEEEEEETTTTEEEEEEEETTTTEEEE------EEEE-S-EE
T ss_pred             cceEEEEeCCCCceEEc----ccCCCeEECCCC---CEEEEEEeccCCCcceEEEEECCCCceEE------EEcC-C-Cc
Confidence            67899999998875433    457889999975   888877654   3  47888887754321      1122 2 27


Q ss_pred             EEEEEcCCCCCEEEEEc
Q psy6415          83 WAAKHLPQNRDLFVTCG   99 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s   99 (174)
                      ..++|+|++ ..||.++
T Consensus       107 ~~~~wspdg-~~l~~~~  122 (347)
T 2gop_A          107 RSLEWNEDS-RKLLIVG  122 (347)
T ss_dssp             EEEEECTTS-SEEEEEE
T ss_pred             cceeECCCC-CEEEEEE
Confidence            899999954 5556555

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.70  E-value=9.4e-08  Score=83.94  Aligned_cols=102  Identities=18%  Similarity=0.061  Sum_probs=68.4

Q ss_pred             CEEEEEecCCCCCCCEEE-----EEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415          30 GVCGVDFDRRDIPMNKLV-----ATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS-  103 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~-----s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~-  103 (174)
                      .+.+++|||++   ++||     .|+++.+|++||+.+++...   ...+..  . ...+++|+|+ +..|+.++.|.. 
T Consensus       122 ~~~~~~~SPDG---~~la~~~~~~G~~~~~i~v~dl~tg~~~~---~~~~~~--~-~~~~~~wspD-g~~l~~~~~d~~~  191 (695)
T 2bkl_A          122 SLGTWAVSWDG---KKVAFAQKPNAADEAVLHVIDVDSGEWSK---VDVIEG--G-KYATPKWTPD-SKGFYYEWLPTDP  191 (695)
T ss_dssp             EEEEEEECTTS---SEEEEEEEETTCSCCEEEEEETTTCCBCS---SCCBSC--C-TTCCCEECTT-SSEEEEEECCCCT
T ss_pred             EEEEEEECCCC---CEEEEEECCCCCceEEEEEEECCCCCCcC---CcccCc--c-cccceEEecC-CCEEEEEEecCCC
Confidence            48899999975   8887     34456789999999876431   001111  1 1267899995 567788888776 


Q ss_pred             ------------EEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCC
Q psy6415         104 ------------LNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADK  171 (174)
Q Consensus       104 ------------V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~  171 (174)
                                  |++|++.+                            |.     ...+++.....|...+.++.|||||
T Consensus       192 ~~~~~~~~~~~~v~~~~l~t----------------------------~~-----~~~~lv~~~~~~~~~~~~~~~SpDG  238 (695)
T 2bkl_A          192 SIKVDERPGYTTIRYHTLGT----------------------------EP-----SKDTVVHERTGDPTTFLQSDLSRDG  238 (695)
T ss_dssp             TSCGGGGGGGCEEEEEETTS----------------------------CG-----GGCEEEECCCCCTTCEEEEEECTTS
T ss_pred             CCccccCCCCCEEEEEECCC----------------------------Cc-----hhceEEEecCCCCEEEEEEEECCCC
Confidence                        99999911                            00     0113566666677778888899988


Q ss_pred             CCC
Q psy6415         172 LGL  174 (174)
Q Consensus       172 ~~~  174 (174)
                      +-|
T Consensus       239 ~~l  241 (695)
T 2bkl_A          239 KYL  241 (695)
T ss_dssp             CCE
T ss_pred             CEE
Confidence            643

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.68  E-value=1.8e-07  Score=82.30  Aligned_cols=94  Identities=10%  Similarity=0.021  Sum_probs=65.0

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc----------------EEEEECCCcccccceeeee
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK----------------LFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~----------------I~iWD~~~~~~~~~~~~~~   73 (174)
                      +|++||+.+++..........+.+++|+|++   +.|+.++.|+.                |++|++.+..... ..+..
T Consensus       152 ~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg---~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~~v~~  227 (710)
T 2xdw_A          152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDG---KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-ILCAE  227 (710)
T ss_dssp             EEEEEETTTTEEEEEEEEEECSCCEEECTTS---SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-EEEEC
T ss_pred             EEEEEECCCCCCCcccccCcccceEEEEeCC---CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-eEEec
Confidence            8999999999876432222236679999974   88998888776                9999998764221 11222


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcC-----CCcEEEEec
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGG-----SGSLNLWQL  109 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~-----Dg~V~lWd~  109 (174)
                      ...|.. .+.+++|+|++. .|+.++.     +..|.+||+
T Consensus       228 ~~~~~~-~~~~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~  266 (710)
T 2xdw_A          228 FPDEPK-WMGGAELSDDGR-YVLLSIREGCDPVNRLWYCDL  266 (710)
T ss_dssp             CTTCTT-CEEEEEECTTSC-EEEEEEECSSSSCCEEEEEEG
T ss_pred             cCCCCe-EEEEEEEcCCCC-EEEEEEEccCCCccEEEEEEC
Confidence            223455 688999999654 5554443     678999999

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.62  E-value=4.2e-07  Score=72.85  Aligned_cols=102  Identities=9%  Similarity=0.026  Sum_probs=68.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      .++...+++|.+||.++++.+...........|+++++   +..+++...++.|.+||+++.+....+......++.. .
T Consensus        57 yv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~---g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~-~  132 (328)
T 3dsm_A           57 WIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSD---EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG-S  132 (328)
T ss_dssp             EEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEET---TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC-B
T ss_pred             EEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCC---CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC-C
Confidence            35566789999999999998776655567899999875   2444555589999999999865332211100000111 2


Q ss_pred             EEEEEEcCCCCCEEEEEc-CCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCG-GSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s-~Dg~V~lWd~  109 (174)
                      ...+++ . ++.++++.. .+++|.+||.
T Consensus       133 p~~i~~-~-~~~lyv~~~~~~~~v~viD~  159 (328)
T 3dsm_A          133 TEQMVQ-Y-GKYVYVNCWSYQNRILKIDT  159 (328)
T ss_dssp             CCCEEE-E-TTEEEEEECTTCCEEEEEET
T ss_pred             cceEEE-E-CCEEEEEcCCCCCEEEEEEC
Confidence            345666 3 566777765 4899999999

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.60  E-value=1.1e-07  Score=83.42  Aligned_cols=99  Identities=9%  Similarity=0.031  Sum_probs=65.4

Q ss_pred             EEecCCcEEEEECCCCCeEEEeecCCCE--EEEEecCCCCCCCEEEEEeCCCc-------------EEEEECCCcccccc
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNLKNGV--CGVDFDRRDIPMNKLVATTLEAK-------------LFVFDLKTLHREKG   68 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V--~sv~f~~~~~~~~~l~s~s~Dg~-------------I~iWD~~~~~~~~~   68 (174)
                      +|+++.+|++||+.+++... ..+...+  .+++|+|++   ..|+.++.|..             |++|++.+..... 
T Consensus       142 ~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg---~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~-  216 (695)
T 2bkl_A          142 NAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDS---KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD-  216 (695)
T ss_dssp             TTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTS---SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-
T ss_pred             CCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCC---CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc-
Confidence            35556789999999987641 1111222  678999975   88999988876             9999998765321 


Q ss_pred             eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC----cEEEEec
Q psy6415          69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG----SLNLWQL  109 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg----~V~lWd~  109 (174)
                      ..+.....|.. .+.+++|||++.. |+.++.++    .|.+|+.
T Consensus       217 ~lv~~~~~~~~-~~~~~~~SpDG~~-l~~~~~~~~~~~~l~~~~~  259 (695)
T 2bkl_A          217 TVVHERTGDPT-TFLQSDLSRDGKY-LFVYILRGWSENDVYWKRP  259 (695)
T ss_dssp             EEEECCCCCTT-CEEEEEECTTSCC-EEEEEEETTTEEEEEEECT
T ss_pred             eEEEecCCCCE-EEEEEEECCCCCE-EEEEEeCCCCceEEEEEcC
Confidence            12223334556 7899999996654 45555444    5555554

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=98.52  E-value=5.2e-07  Score=73.45  Aligned_cols=97  Identities=10%  Similarity=0.069  Sum_probs=65.4

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeeeecc
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      .|++|.+||..++++.........- .++|+|++   +.|.+++          .+++|.+||+.+.+.......  ...
T Consensus        29 ~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg---~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~--~~~  102 (361)
T 2oiz_A           29 TESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDG---KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISL--PPK  102 (361)
T ss_dssp             GGCEEEEEETTTCCEEEEEECCEEE-EEEECTTS---SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEE--CTT
T ss_pred             ccCeEEEEECCCCeEEEEecCCCCC-ceEECCCC---CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEc--Ccc
Confidence            4789999999999877654433233 89999974   7777765          377899999987654332211  101


Q ss_pred             ---cCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEecc
Q psy6415          77 ---HKATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQLV  110 (174)
Q Consensus        77 ---h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~~  110 (174)
                         +.. ....++|+|+++.++++... +++|.+||++
T Consensus       103 ~~~~g~-~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~  139 (361)
T 2oiz_A          103 RVQGLN-YDGLFRQTTDGKFIVLQNASPATSIGIVDVA  139 (361)
T ss_dssp             BCCBCC-CGGGEEECTTSSEEEEEEESSSEEEEEEETT
T ss_pred             ccccCC-CcceEEECCCCCEEEEECCCCCCeEEEEECC
Confidence               122 45678999965544444433 7899999994

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=98.51  E-value=2.5e-06  Score=66.54  Aligned_cols=91  Identities=10%  Similarity=-0.032  Sum_probs=58.8

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC-CcccccceeeeeecccCcCcEEEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK-TLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~-~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      +.|..+|.. ++...........+.++|+|++   +.|++.+.++.|++||+. ++.....  ...+..+.. .+..+++
T Consensus       153 ~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg---~~lv~~~~~~~i~~~~~~~~g~~~~~--~~~~~~~~~-~p~~i~~  225 (296)
T 3e5z_A          153 RWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSG---NLLVSDTGDNATHRYCLNARGETEYQ--GVHFTVEPG-KTDGLRV  225 (296)
T ss_dssp             CEEEEECTT-SCEEEEECCCSSEEEEEECTTS---CEEEEETTTTEEEEEEECSSSCEEEE--EEEECCSSS-CCCSEEE
T ss_pred             cEEEEECCC-CCEEEeecCCCCCccEEECCCC---CEEEEeCCCCeEEEEEECCCCcCcCC--CeEeeCCCC-CCCeEEE
Confidence            345555554 4444333344567899999974   777778889999999997 3221000  011123344 5678999


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .|+ +.+++++  ++.|.+||.
T Consensus       226 d~~-G~l~v~~--~~~v~~~~~  244 (296)
T 3e5z_A          226 DAG-GLIWASA--GDGVHVLTP  244 (296)
T ss_dssp             BTT-SCEEEEE--TTEEEEECT
T ss_pred             CCC-CCEEEEc--CCeEEEECC
Confidence            995 5677766  788999998

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.50  E-value=1.1e-06  Score=70.42  Aligned_cols=88  Identities=8%  Similarity=0.001  Sum_probs=56.7

Q ss_pred             CcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCC-----CcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           9 GDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLE-----AKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~D-----g~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      ..|.+||+.++.......+  ...+..++|+|++   +.|+.++.+     +.|++||+++++...   +   ....  .
T Consensus       216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---l---~~~~--~  284 (396)
T 3c5m_A          216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG---SAMAYVSYFKGQTDRVIYKANPETLENEE---V---MVMP--P  284 (396)
T ss_dssp             CCCEEEETTSCCCEESSCCCTTEEEEEEEECTTS---SCEEEEEEETTTCCEEEEEECTTTCCEEE---E---EECC--S
T ss_pred             ceEEEEECCCCceeEeeccCCCccccceEECCCC---CEEEEEecCCCCccceEEEEECCCCCeEE---e---eeCC--C
Confidence            4688899887664433222  1247889999974   777766544     459999998764321   1   1111  2


Q ss_pred             EEEEEEcC-CCCCEEEEEc----------------CCCcEEEEec
Q psy6415          82 VWAAKHLP-QNRDLFVTCG----------------GSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP-~~~~~las~s----------------~Dg~V~lWd~  109 (174)
                      .. +.|+| ++. ++++++                .++.|.+||+
T Consensus       285 ~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~  327 (396)
T 3c5m_A          285 CS-HLMSNFDGS-LMVGDGCDAPVDVADADSYNIENDPFLYVLNT  327 (396)
T ss_dssp             EE-EEEECSSSS-EEEEEECCC----------CCCCCCEEEEEET
T ss_pred             CC-CCccCCCCc-eEEEecCCcceeeccccccccCCCCcEEEEec
Confidence            33 88999 655 666654                3578999998

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.49  E-value=7.5e-07  Score=78.31  Aligned_cols=69  Identities=6%  Similarity=-0.023  Sum_probs=48.9

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCCC-----cEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLEA-----KLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS-  103 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~Dg-----~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~-  103 (174)
                      .+.+++|+|++   ++||.++.++     +|++||+.+++....    ++  ... .+.+++|+|+ +..|+.++.|+. 
T Consensus       126 ~~~~~~~SPDg---~~la~~~~~~G~~~~~i~v~d~~tg~~~~~----~~--~~~-~~~~~~wspD-g~~l~~~~~~~~~  194 (710)
T 2xdw_A          126 ALRGYAFSEDG---EYFAYGLSASGSDWVTIKFMKVDGAKELPD----VL--ERV-KFSCMAWTHD-GKGMFYNAYPQQD  194 (710)
T ss_dssp             EEEEEEECTTS---SEEEEEEEETTCSCEEEEEEETTTTEEEEE----EE--EEE-CSCCEEECTT-SSEEEEEECCCCS
T ss_pred             EEEEEEECCCC---CEEEEEEcCCCCceEEEEEEECCCCCCCcc----cc--cCc-ccceEEEEeC-CCEEEEEEECCcc
Confidence            47889999975   8888765443     899999998764321    11  112 3567899995 556777777766 


Q ss_pred             ---------------EEEEec
Q psy6415         104 ---------------LNLWQL  109 (174)
Q Consensus       104 ---------------V~lWd~  109 (174)
                                     |++|++
T Consensus       195 ~~~~~~~~~~~~~~~v~~~~l  215 (710)
T 2xdw_A          195 GKSDGTETSTNLHQKLYYHVL  215 (710)
T ss_dssp             SCCSSSCCCCCCCCEEEEEET
T ss_pred             ccccccccccCCCCEEEEEEC
Confidence                           999998

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=98.49  E-value=1.2e-06  Score=69.29  Aligned_cols=91  Identities=21%  Similarity=0.247  Sum_probs=63.9

Q ss_pred             ecCCcEEEEECCCCCeEEE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           6 YDNGDLKMFDLKTMSLKWE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +.++.++.|.   +..... ..+...+.+++|+|++   +.+++++.++.|.+||.++.+...     ....+.. .+.+
T Consensus        24 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g---~l~~~~~~~~~i~~~d~~~~~~~~-----~~~~~~~-~~~~   91 (333)
T 2dg1_A           24 ISESELQTIT---AEPWLEISKKGLQLEGLNFDRQG---QLFLLDVFEGNIFKINPETKEIKR-----PFVSHKA-NPAA   91 (333)
T ss_dssp             CCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEEE-----EEECSSS-SEEE
T ss_pred             eecccCcccc---cceeEEEeccCccccCcEECCCC---CEEEEECCCCEEEEEeCCCCcEEE-----EeeCCCC-Ccce
Confidence            5567788882   222222 2344568899999864   777788899999999998754321     1113445 7999


Q ss_pred             EEEcCCCCCEEEEEcCC----CcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGS----GSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~D----g~V~lWd~  109 (174)
                      ++|+|+ +.+++++..+    +.|.+||.
T Consensus        92 i~~~~d-g~l~v~~~~~~~~~~~i~~~d~  119 (333)
T 2dg1_A           92 IKIHKD-GRLFVCYLGDFKSTGGIFAATE  119 (333)
T ss_dssp             EEECTT-SCEEEEECTTSSSCCEEEEECT
T ss_pred             EEECCC-CcEEEEeCCCCCCCceEEEEeC
Confidence            999995 5688877776    68999998

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.47  E-value=3.9e-06  Score=65.37  Aligned_cols=95  Identities=18%  Similarity=0.169  Sum_probs=61.0

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEec----CCCCCCCEE-EEEeCCCcEEEEECC-CcccccceeeeeecccC-cCc
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFD----RRDIPMNKL-VATTLEAKLFVFDLK-TLHREKGFAYLSEKAHK-ATT   81 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~----~~~~~~~~l-~s~s~Dg~I~iWD~~-~~~~~~~~~~~~~~~h~-~~~   81 (174)
                      +.|..||.. ++...........+.++|+    |++   +.| ++.+.++.|.+||++ +...........+..+. . .
T Consensus       153 ~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg---~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~-~  227 (314)
T 1pjx_A          153 GSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRP---YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG-G  227 (314)
T ss_dssp             EEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCE---EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC-E
T ss_pred             CeEEEECCC-CCEEEeccCCCCcceEEEecccCCCC---CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC-C
Confidence            467777766 5544333333456889999    863   444 555678999999986 32211000112233343 4 6


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...+++.|+ +.++++...++.|.+||.
T Consensus       228 p~~i~~d~~-G~l~v~~~~~~~i~~~d~  254 (314)
T 1pjx_A          228 ADGMDFDED-NNLLVANWGSSHIEVFGP  254 (314)
T ss_dssp             EEEEEEBTT-CCEEEEEETTTEEEEECT
T ss_pred             CCceEECCC-CCEEEEEcCCCEEEEEcC
Confidence            788999994 578888878899999998

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.41  E-value=2.1e-06  Score=68.73  Aligned_cols=92  Identities=10%  Similarity=-0.008  Sum_probs=62.1

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecC-CCCCCCEEEEEeCC------CcEEEEECCCcccccceeeeeeccc--
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDR-RDIPMNKLVATTLE------AKLFVFDLKTLHREKGFAYLSEKAH--   77 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~-~~~~~~~l~s~s~D------g~I~iWD~~~~~~~~~~~~~~~~~h--   77 (174)
                      .+..|.+||+.+++......+...+..++|+| ++   ..|+..+.+      ..|.+||+.+.+..      .+..+  
T Consensus       166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~~~------~l~~~~~  236 (396)
T 3c5m_A          166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDD---STVGFCHEGPHDLVDARMWLVNEDGSNVR------KIKEHAE  236 (396)
T ss_dssp             CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE---EEEEEEECSCSSSCSCCCEEEETTSCCCE------ESSCCCT
T ss_pred             CcceEEEEECCCCcEEeeccCCcccccceECCCCC---CEEEEEecCCCCCCCceEEEEECCCCcee------EeeccCC
Confidence            45689999999988765555667799999999 53   667766544      46888898764321      11122  


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCC-----CcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGS-----GSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~D-----g~V~lWd~  109 (174)
                      .. .+..++|+|++.. |+.++.+     +.|++||+
T Consensus       237 ~~-~~~~~~~spdg~~-l~~~~~~~~~~~~~l~~~d~  271 (396)
T 3c5m_A          237 GE-SCTHEFWIPDGSA-MAYVSYFKGQTDRVIYKANP  271 (396)
T ss_dssp             TE-EEEEEEECTTSSC-EEEEEEETTTCCEEEEEECT
T ss_pred             Cc-cccceEECCCCCE-EEEEecCCCCccceEEEEEC
Confidence            22 5788999996544 4444333     45999999

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.35  E-value=1.3e-05  Score=63.97  Aligned_cols=92  Identities=10%  Similarity=0.113  Sum_probs=68.0

Q ss_pred             CcEEEEECCCCCeEEEeec--CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNL--KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~--~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      +.|.++|.+++++......  ....+.++|+|++   +.|..+..  .|.+||..+.+.... .  .+..+.. ..+.++
T Consensus       203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~---~~lyv~~~--~v~~~d~~t~~~~~~-~--~~~~~~~-~p~gi~  273 (328)
T 3dsm_A          203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR---DTLYWINN--DIWRMPVEADRVPVR-P--FLEFRDT-KYYGLT  273 (328)
T ss_dssp             CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS---CEEEEESS--SEEEEETTCSSCCSS-C--SBCCCSS-CEEEEE
T ss_pred             ceEEEEECCCCeEEEEEecCCCCCceeEEEecCC---CEEEEEcc--EEEEEECCCCceeee-e--eecCCCC-ceEEEE
Confidence            7899999999887655443  2468999999974   66666544  899999987653211 0  1111134 678999


Q ss_pred             EcCCCCCEEEEE----cCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTC----GGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~----s~Dg~V~lWd~  109 (174)
                      ++|+++.++++.    ..+++|.+||.
T Consensus       274 vdp~~g~lyva~~~~y~~~~~V~v~d~  300 (328)
T 3dsm_A          274 VNPNNGEVYVADAIDYQQQGIVYRYSP  300 (328)
T ss_dssp             ECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred             EcCCCCeEEEEcccccccCCEEEEECC
Confidence            999888899998    78999999999

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.32  E-value=1.6e-05  Score=60.60  Aligned_cols=98  Identities=13%  Similarity=0.074  Sum_probs=67.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .++...++.|.+||..+....... .....+++|+++|++   +.+++...++.|.+||..+.....     ....+-. 
T Consensus       122 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~~~~~~~-----~~~~~~~-  192 (270)
T 1rwi_B          122 YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG---NVYVTDTDNNRVVKLEAESNNQVV-----LPFTDIT-  192 (270)
T ss_dssp             EEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTC---CEEEEEGGGTEEEEECTTTCCEEE-----CCCSSCC-
T ss_pred             EEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCC---CEEEEECCCCEEEEEecCCCceEe-----ecccCCC-
Confidence            345556788999987655443221 122457789999864   777777788999999988643211     1112224 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..+++.|+ +.++++...++.|.+||.
T Consensus       193 ~p~~i~~d~~-g~l~v~~~~~~~v~~~~~  220 (270)
T 1rwi_B          193 APWGIAVDEA-GTVYVTEHNTNQVVKLLA  220 (270)
T ss_dssp             SEEEEEECTT-CCEEEEETTTSCEEEECT
T ss_pred             CceEEEECCC-CCEEEEECCCCcEEEEcC
Confidence            6889999995 478898888999999998

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.31  E-value=7.1e-06  Score=64.88  Aligned_cols=86  Identities=14%  Similarity=0.225  Sum_probs=58.8

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeC---------------------------CCcEEEEECCC
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTL---------------------------EAKLFVFDLKT   62 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~---------------------------Dg~I~iWD~~~   62 (174)
                      .|.+||+.+++......... +.+++|+|++   +.|+.++.                           ...|.+||+.+
T Consensus        86 ~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg---~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~  161 (347)
T 2gop_A           86 EIWVADLETLSSKKILEAKN-IRSLEWNEDS---RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES  161 (347)
T ss_dssp             EEEEEETTTTEEEEEEEESE-EEEEEECTTS---SEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred             eEEEEECCCCceEEEEcCCC-ccceeECCCC---CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence            38888998887655444444 9999999974   78887763                           25799999987


Q ss_pred             cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC-------cEEEEec
Q psy6415          63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG-------SLNLWQL  109 (174)
Q Consensus        63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg-------~V~lWd~  109 (174)
                      ++...     .+..  . .+..++|+|+ + ++++++.++       ...||.+
T Consensus       162 ~~~~~-----~l~~--~-~~~~~~~spd-g-~~~~~~~~~~~~~~~~~~~l~~~  205 (347)
T 2gop_A          162 EEVIE-----EFEK--P-RFSSGIWHRD-K-IVVNVPHREIIPQYFKFWDIYIW  205 (347)
T ss_dssp             TEEEE-----EEEE--E-TTCEEEEETT-E-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred             CeEEe-----eecC--C-CcccccCCCC-e-EEEEEecccccccccccccEEEe
Confidence            65311     1112  2 4678899995 4 777776552       5677776

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.27  E-value=3.4e-05  Score=66.88  Aligned_cols=105  Identities=16%  Similarity=0.136  Sum_probs=75.4

Q ss_pred             EEEEecCCcEEEEECC--CCCeEEEeecCCCEEEEEec----CCCCCCCEEEE-EeCCCcEEEEECCCcccccceeeeee
Q psy6415           2 VVAGYDNGDLKMFDLK--TMSLKWETNLKNGVCGVDFD----RRDIPMNKLVA-TTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         2 lasgs~Dg~iklWDl~--~~~~~~~~~~~~~V~sv~f~----~~~~~~~~l~s-~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      |.+++.|+.|.+||+.  +++.+...........++|+    |++   .++++ ...+++|.|+|..+.+.++.......
T Consensus       211 lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDG---k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~  287 (567)
T 1qks_A          211 LFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWED---KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGM  287 (567)
T ss_dssp             EEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTT---TEEEEEEEETTEEEEEETTTCCEEEEEECCEE
T ss_pred             EEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCC---CEEEEEEccCCeEEEEECCCCcEEEEEecccc
Confidence            5667889999999996  77776655545567899999    564   66655 55679999999988775543322111


Q ss_pred             -----cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 -----KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 -----~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                           ..|....+..+.++|+++..+++-..+|.|.++|+
T Consensus       288 ~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~  327 (567)
T 1qks_A          288 TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDY  327 (567)
T ss_dssp             CTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred             ccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEec
Confidence                 01222147788899977777888888999999998

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.26  E-value=3.4e-05  Score=60.48  Aligned_cols=86  Identities=14%  Similarity=0.138  Sum_probs=56.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-c-cCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-A-HKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~-h~~   79 (174)
                      +++...++.|..||..++... .......+.+++++|++   + |+.+. ++.|.+||.++.+...   +.... . ...
T Consensus        28 ~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~dG---~-l~v~~-~~~l~~~d~~~g~~~~---~~~~~~~~~~~   98 (297)
T 3g4e_A           28 LFVDIPAKKVCRWDSFTKQVQ-RVTMDAPVSSVALRQSG---G-YVATI-GTKFCALNWKEQSAVV---LATVDNDKKNN   98 (297)
T ss_dssp             EEEETTTTEEEEEETTTCCEE-EEECSSCEEEEEEBTTS---S-EEEEE-TTEEEEEETTTTEEEE---EEECCTTCSSE
T ss_pred             EEEECCCCEEEEEECCCCcEE-EEeCCCceEEEEECCCC---C-EEEEE-CCeEEEEECCCCcEEE---EEecCCCCCCC
Confidence            455667889999999887763 23345779999999974   5 44444 5689999998754211   11111 1 123


Q ss_pred             CcEEEEEEcCCCCCEEEEE
Q psy6415          80 TTVWAAKHLPQNRDLFVTC   98 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~   98 (174)
                       .++.+++.|+ +.++++.
T Consensus        99 -~~~di~~d~d-G~l~~~~  115 (297)
T 3g4e_A           99 -RFNDGKVDPA-GRYFAGT  115 (297)
T ss_dssp             -EEEEEEECTT-SCEEEEE
T ss_pred             -CCCCEEECCC-CCEEEec
Confidence             5789999995 4566654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.19  E-value=2.6e-05  Score=59.34  Aligned_cols=98  Identities=11%  Similarity=0.028  Sum_probs=71.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .++...++.|.+||..+........ ....+.+|++++++   +.+++...++.|.+||..+....     .....+-. 
T Consensus       164 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g---~l~v~~~~~~~v~~~~~~~~~~~-----~~~~~~~~-  234 (270)
T 1rwi_B          164 YVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG---TVYVTEHNTNQVVKLLAGSTTST-----VLPFTGLN-  234 (270)
T ss_dssp             EEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC---CEEEEETTTSCEEEECTTCSCCE-----ECCCCSCS-
T ss_pred             EEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC---CEEEEECCCCcEEEEcCCCCcce-----eeccCCCC-
Confidence            3455567899999998776543322 22568899999863   77777778999999998764321     11112224 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++++.|+ +.++++...+++|+++++
T Consensus       235 ~p~~i~~~~~-g~l~v~~~~~~~v~~~~~  262 (270)
T 1rwi_B          235 TPLAVAVDSD-RTVYVADRGNDRVVKLTS  262 (270)
T ss_dssp             CEEEEEECTT-CCEEEEEGGGTEEEEECC
T ss_pred             CceeEEECCC-CCEEEEECCCCEEEEEcC
Confidence            6899999995 569999999999999999

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.19  E-value=0.00016  Score=55.29  Aligned_cols=96  Identities=8%  Similarity=0.022  Sum_probs=66.8

Q ss_pred             EEEecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++...++.|..||.. +......  .....+.+|++++++   +.+++...++.|..||... +    +....+..... 
T Consensus        30 v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~g-~----~~~~~~~~~~~-   99 (299)
T 2z2n_A           30 ITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDG---EVWFTENAANKIGRITKKG-I----IKEYTLPNPDS-   99 (299)
T ss_dssp             EEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECTTS-C----EEEEECSSTTC-
T ss_pred             EEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCC---CEEEeCCCCCeEEEECCCC-c----EEEEeCCCcCC-
Confidence            333447889999988 6554322  134679999999863   6677777789999999863 2    11112222344 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..+++.| ++.++++...++.|..||.
T Consensus       100 ~~~~i~~~~-~g~l~v~~~~~~~i~~~d~  127 (299)
T 2z2n_A          100 APYGITEGP-NGDIWFTEMNGNRIGRITD  127 (299)
T ss_dssp             CEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred             CceeeEECC-CCCEEEEecCCceEEEECC
Confidence            689999999 4578888888899999987

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.19  E-value=8.2e-06  Score=72.14  Aligned_cols=68  Identities=7%  Similarity=-0.045  Sum_probs=46.0

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCC-----CcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLE-----AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS-  103 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~D-----g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~-  103 (174)
                      .+.+++|+|++   ++||.++.+     .+|++||+.+++....    .  .+.. .+.+++|+|+  ..|+.++.|+. 
T Consensus       164 ~~~~~~~SPDG---~~la~~~~~~G~e~~~i~v~dl~tg~~~~~----~--~~~~-~~~~~~wspD--~~l~~~~~~~~~  231 (741)
T 1yr2_A          164 ALDAWAASDDG---RLLAYSVQDGGSDWRTVKFVGVADGKPLAD----E--LKWV-KFSGLAWLGN--DALLYSRFAEPK  231 (741)
T ss_dssp             EEEEEEECTTS---SEEEEEEEETTCSEEEEEEEETTTCCEEEE----E--EEEE-ESCCCEESTT--SEEEEEECCCC-
T ss_pred             EEEeEEECCCC---CEEEEEEcCCCCceEEEEEEECCCCCCCCc----c--CCCc-eeccEEEECC--CEEEEEEecCcc
Confidence            47889999975   888876543     4699999998764311    1  1111 2357899995  56666666654 


Q ss_pred             -------------EEEEec
Q psy6415         104 -------------LNLWQL  109 (174)
Q Consensus       104 -------------V~lWd~  109 (174)
                                   |++|++
T Consensus       232 ~~~~~~~~~~~~~v~~~~l  250 (741)
T 1yr2_A          232 EGQAFQALNYNQTVWLHRL  250 (741)
T ss_dssp             -------CCCCCEEEEEET
T ss_pred             cccccccCCCCCEEEEEEC
Confidence                         888888

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=98.17  E-value=2.9e-05  Score=60.92  Aligned_cols=97  Identities=10%  Similarity=-0.007  Sum_probs=67.7

Q ss_pred             ecCCcEEEEECCCCCeEEEeecC--CCEEEEEecCCCCCCCEEEEEeC-CCcEEEEECCCcccccceeeee-ecccCcCc
Q psy6415           6 YDNGDLKMFDLKTMSLKWETNLK--NGVCGVDFDRRDIPMNKLVATTL-EAKLFVFDLKTLHREKGFAYLS-EKAHKATT   81 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~~~--~~V~sv~f~~~~~~~~~l~s~s~-Dg~I~iWD~~~~~~~~~~~~~~-~~~h~~~~   81 (174)
                      +.++.|..||. +++.++.....  ..+.++++.|++   +.+++.+. ++.|..+|.. ++.+..+.... ...+.. .
T Consensus        53 s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG---~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~-~  126 (276)
T 3no2_A           53 SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDG---NALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHA-Q  126 (276)
T ss_dssp             ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTS---CEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGG-S
T ss_pred             eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCC---CEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccc-c
Confidence            45788999999 78888776543  468899999874   88888777 7788888864 33222221111 012223 4


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.+++.| ++.++++...++.|..||.
T Consensus       127 ~~~v~~~~-~G~~lv~~~~~~~v~~~d~  153 (276)
T 3no2_A          127 FRQINKNK-KGNYLVPLFATSEVREIAP  153 (276)
T ss_dssp             CSCCEECT-TSCEEEEETTTTEEEEECT
T ss_pred             ccCceECC-CCCEEEEecCCCEEEEECC
Confidence            55667888 5678999999999999999

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.17  E-value=2.8e-05  Score=61.03  Aligned_cols=76  Identities=13%  Similarity=0.094  Sum_probs=51.2

Q ss_pred             CCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECC--CcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEE
Q psy6415          29 NGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLK--TLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLN  105 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~--~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~  105 (174)
                      ...+.++|+|++   +.| ++.+.++.|.+||+.  ++..........+..+.. ....+++.|+ +.+.++....+.|.
T Consensus       149 ~~pngi~~spdg---~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-~p~g~~~d~~-G~lwva~~~~~~v~  223 (297)
T 3g4e_A          149 DISNGLDWSLDH---KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-IPDGMCIDAE-GKLWVACYNGGRVI  223 (297)
T ss_dssp             SBEEEEEECTTS---CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-EEEEEEEBTT-SCEEEEEETTTEEE
T ss_pred             ccccceEEcCCC---CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-CCCeeEECCC-CCEEEEEcCCCEEE
Confidence            446889999974   555 667788999999974  332110011112223334 6788999995 57888888888999


Q ss_pred             EEec
Q psy6415         106 LWQL  109 (174)
Q Consensus       106 lWd~  109 (174)
                      .||.
T Consensus       224 ~~d~  227 (297)
T 3g4e_A          224 RLDP  227 (297)
T ss_dssp             EECT
T ss_pred             EEcC
Confidence            9998

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.16  E-value=1.4e-05  Score=70.75  Aligned_cols=94  Identities=7%  Similarity=0.053  Sum_probs=60.2

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc--------------EEEEECCCcccccceeeeee
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK--------------LFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~--------------I~iWD~~~~~~~~~~~~~~~   74 (174)
                      .+|++||+.+++..........+.+++|+|+    +.|+.++.|+.              |++|++.+..... ..+...
T Consensus       189 ~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD----~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~lv~~~  263 (741)
T 1yr2_A          189 RTVKFVGVADGKPLADELKWVKFSGLAWLGN----DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-QPVFAT  263 (741)
T ss_dssp             EEEEEEETTTCCEEEEEEEEEESCCCEESTT----SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-EEEECC
T ss_pred             EEEEEEECCCCCCCCccCCCceeccEEEECC----CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-EEEecc
Confidence            3599999999987543211111356889984    67877776654              8999997654221 112222


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCC-----CcEEEEec
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGS-----GSLNLWQL  109 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~D-----g~V~lWd~  109 (174)
                      ..+.. .+.++.|||++ ..|+..+.+     ..|++||+
T Consensus       264 ~~~~~-~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~  301 (741)
T 1yr2_A          264 PELPK-RGHGASVSSDG-RWVVITSSEGTDPVNTVHVARV  301 (741)
T ss_dssp             TTCTT-CEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEE
T ss_pred             CCCCe-EEEEEEECCCC-CEEEEEEEccCCCcceEEEEEC
Confidence            33444 58899999955 455555544     38999998

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.13  E-value=0.00011  Score=58.56  Aligned_cols=93  Identities=10%  Similarity=0.018  Sum_probs=56.3

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECC--Cc-ccccceeeeeecccCcCcEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLK--TL-HREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~--~~-~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      .|..+|  +++...........+.++|+|++   +.| ++.+.++.|.+||+.  ++ ..........+..... ....+
T Consensus       162 ~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg---~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~-~p~gi  235 (326)
T 2ghs_A          162 SIYHVA--KGKVTKLFADISIPNSICFSPDG---TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG-GMDGS  235 (326)
T ss_dssp             EEEEEE--TTEEEEEEEEESSEEEEEECTTS---CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS-EEEEE
T ss_pred             EEEEEe--CCcEEEeeCCCcccCCeEEcCCC---CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC-CCCee
Confidence            344444  45443322223457899999974   655 555678999999986  43 2111011112222334 56789


Q ss_pred             EEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          86 KHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        86 ~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++.++ +.++++...++.|..||.
T Consensus       236 ~~d~~-G~lwva~~~~~~v~~~d~  258 (326)
T 2ghs_A          236 VCDAE-GHIWNARWGEGAVDRYDT  258 (326)
T ss_dssp             EECTT-SCEEEEEETTTEEEEECT
T ss_pred             EECCC-CCEEEEEeCCCEEEEECC
Confidence            99985 567777767788999988

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.07  E-value=6e-05  Score=59.24  Aligned_cols=87  Identities=6%  Similarity=-0.123  Sum_probs=55.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc-CcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH-KAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h-~~~   80 (174)
                      ++++..++.|..||. ++...........++++++++++   +.+++...++.|.+||.. ++.. .+ .....+. .. 
T Consensus        60 ~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG---~l~v~~~~~~~v~~~~~~-g~~~-~~-~~~~~~~~~~-  131 (305)
T 3dr2_A           60 VWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQ---RLVHCEHGRRAITRSDAD-GQAH-LL-VGRYAGKRLN-  131 (305)
T ss_dssp             EEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTS---CEEEEETTTTEEEEECTT-SCEE-EE-ECEETTEECS-
T ss_pred             EEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCC---CEEEEECCCCEEEEECCC-CCEE-EE-EeccCCCccC-
Confidence            567778899999998 45543333345678999999964   656655667899999986 3211 11 1111111 12 


Q ss_pred             cEEEEEEcCCCCCEEEE
Q psy6415          81 TVWAAKHLPQNRDLFVT   97 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las   97 (174)
                      .++.+++.|+ +.+++|
T Consensus       132 ~~~~i~~d~d-G~l~~t  147 (305)
T 3dr2_A          132 SPNDLIVARD-GAIWFT  147 (305)
T ss_dssp             CCCCEEECTT-SCEEEE
T ss_pred             CCCCEEECCC-CCEEEe
Confidence            4678999994 567776

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.04  E-value=3.9e-07  Score=74.55  Aligned_cols=100  Identities=13%  Similarity=0.135  Sum_probs=57.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .|++|+.||.|..||.++|++++.... ..+.+..+.++   +..+++++.|+.|+.||.++++.+..+     ..+...
T Consensus        11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~---g~~~v~~s~dg~l~a~d~~tG~~~w~~-----~~~~~~   81 (369)
T 2hz6_A           11 LLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVE---EPAFLPDPNDGSLYTLGSKNNEGLTKL-----PFTIPE   81 (369)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC--------CCEEECTTTCCEEEC-----CCSEEC-----SCCHHH
T ss_pred             EEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcC---CCEEEEeCCCCEEEEEECCCCceeeee-----eccCcc
Confidence            378899999999999999999887665 55554444443   356777899999999999876542111     111100


Q ss_pred             cEEE-EEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          81 TVWA-AKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        81 ~i~~-v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .+.+ ..+. .+ ..+++|+.||.|+.||.++
T Consensus        82 ~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~t  111 (369)
T 2hz6_A           82 LVQASPCRS-SD-GILYMGKKQDIWYVIDLLT  111 (369)
T ss_dssp             HHTTCSCC-------CCCCEEEEEEEEECCC-
T ss_pred             ccccCceEe-cC-CEEEEEeCCCEEEEEECCC
Confidence            1100 0011 13 3567788899999999943

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.03  E-value=8.3e-05  Score=57.70  Aligned_cols=98  Identities=21%  Similarity=0.237  Sum_probs=68.4

Q ss_pred             EEEecCCcEEEEECC-CCCeEE-----Eee-cC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           3 VAGYDNGDLKMFDLK-TMSLKW-----ETN-LK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         3 asgs~Dg~iklWDl~-~~~~~~-----~~~-~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      ++...++.|.+||++ ++....     ... +. ..+..+++++++   +.+++...++.|.+||.++.+...     .+
T Consensus       192 v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G---~l~v~~~~~~~i~~~d~~~g~~~~-----~~  263 (314)
T 1pjx_A          192 VAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN---NLLVANWGSSHIEVFGPDGGQPKM-----RI  263 (314)
T ss_dssp             EEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC---CEEEEEETTTEEEEECTTCBSCSE-----EE
T ss_pred             EEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC---CEEEEEcCCCEEEEEcCCCCcEeE-----EE
Confidence            444567899999986 444211     111 11 457889999864   777888789999999998544322     22


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+.. .+.+++|+|++..++++...++.|..|++
T Consensus       264 ~~~~~-~~~~i~~~~dg~~l~v~~~~~~~l~~~~~  297 (314)
T 1pjx_A          264 RCPFE-KPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             ECSSS-CEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             eCCCC-CceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence            23445 78999999965447888888899999998

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.02  E-value=4.4e-05  Score=63.22  Aligned_cols=100  Identities=6%  Similarity=0.044  Sum_probs=67.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC--cEEEEECCCcccccceeeeeecc-cC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA--KLFVFDLKTLHREKGFAYLSEKA-HK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~~-h~   78 (174)
                      +++...++.|+.||+.++.+........... ++|+|++   +.|+++..++  .|.+||.........  ...... ..
T Consensus       145 yv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g---~~l~~~d~~~~~~I~~~d~~~~~~~~~--~g~~~~~~~  218 (409)
T 3hrp_A          145 LAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDK---QRVYSIGWEGTHTVYVYMKASGWAPTR--IGQLGSTFS  218 (409)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTS---SEEEEEBSSTTCEEEEEEGGGTTCEEE--EEECCTTSC
T ss_pred             EEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCC---CcEEEEecCCCceEEEEEcCCCceeEE--eeeccchhc
Confidence            4555667899999999887655443333344 8999974   7888887766  788888765432111  101112 33


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . ..++++++|+++.+++ +..+++|+.||.
T Consensus       219 ~-~p~~iav~p~~g~lyv-~d~~~~I~~~d~  247 (409)
T 3hrp_A          219 G-KIGAVALDETEEWLYF-VDSNKNFGRFNV  247 (409)
T ss_dssp             S-CCCBCEECTTSSEEEE-ECTTCEEEEEET
T ss_pred             C-CcEEEEEeCCCCeEEE-EECCCcEEEEEC
Confidence            4 6789999997666666 677899999998

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.00  E-value=0.00046  Score=52.71  Aligned_cols=96  Identities=5%  Similarity=-0.111  Sum_probs=65.3

Q ss_pred             EEEecCCcEEEEECCCCCeEE-Eee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKW-ETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~-~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++...++.|..||.+ ++... ... ....+.+++++|++   +.+++...++.|.+||. +.+..    ......+.. 
T Consensus        72 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~d~-~g~~~----~~~~~~~~~-  141 (299)
T 2z2n_A           72 FTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG---DIWFTEMNGNRIGRITD-DGKIR----EYELPNKGS-  141 (299)
T ss_dssp             EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECT-TCCEE----EEECSSTTC-
T ss_pred             EeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC---CEEEEecCCceEEEECC-CCCEE----EecCCCCCC-
Confidence            344457889999986 44322 211 34568999999863   67777778899999998 43211    111222334 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..+++.|+ +.++++...++.|..||.
T Consensus       142 ~~~~i~~~~~-g~l~v~~~~~~~i~~~~~  169 (299)
T 2z2n_A          142 YPSFITLGSD-NALWFTENQNNAIGRITE  169 (299)
T ss_dssp             CEEEEEECTT-SCEEEEETTTTEEEEECT
T ss_pred             CCceEEEcCC-CCEEEEeCCCCEEEEEcC
Confidence            6899999995 578888888889999988

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.99  E-value=7.5e-06  Score=66.83  Aligned_cols=93  Identities=14%  Similarity=0.050  Sum_probs=49.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      |++|+.|+.|+.||.++|+.++.......   +.++|.   ++.+++++.|+.|+.||.++++.+-.+...   .     
T Consensus        95 v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~---~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~---~-----  160 (369)
T 2hz6_A           95 LYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPS---TSLLYLGRTEYTITMYDTKTRELRWNATYF---D-----  160 (369)
T ss_dssp             CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE---E-----
T ss_pred             EEEEeCCCEEEEEECCCCcEEEEecCCCc---cccccc---CCEEEEEecCCEEEEEECCCCCEEEeEecc---c-----
Confidence            45678899999999999998876543332   344554   378889999999999999987643222110   1     


Q ss_pred             EEEEEEcCC---CCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQ---NRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~---~~~~las~s~Dg~V~lWd~  109 (174)
                      .....+.++   ++. +..++.||.|..||.
T Consensus       161 ~~~~~~~~~~~~~~~-v~~~~~dg~v~a~d~  190 (369)
T 2hz6_A          161 YAASLPEDDVDYKMS-HFVSNGDGLVVTVDS  190 (369)
T ss_dssp             ECCBCCCCCTTCCCC-EEEEETSCEEEEECT
T ss_pred             ccCccccCCccccce-EEEECCCCEEEEEEC
Confidence            111222331   133 455788999999999

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=97.99  E-value=2.7e-05  Score=62.48  Aligned_cols=77  Identities=12%  Similarity=0.001  Sum_probs=51.8

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeC-----CCcEEEEECCCcccccceeee-eecccCcCcEEEEEEcCCCCCEEEEEc---
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTL-----EAKLFVFDLKTLHREKGFAYL-SEKAHKATTVWAAKHLPQNRDLFVTCG---   99 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~-----Dg~I~iWD~~~~~~~~~~~~~-~~~~h~~~~i~~v~fsP~~~~~las~s---   99 (174)
                      ..+.+|+|++++   +.+++-+.     +..|.+||+++.+..+.+... ....+.. .++.+++.|+++.++++-.   
T Consensus        67 ~~p~gv~~d~~g---~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~-~~~~v~vd~~~g~~yvtd~~~~  142 (343)
T 2qe8_A           67 DTVLGIKSDGNG---IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNS-FVNDLAVDLIHNFVYISDPAPD  142 (343)
T ss_dssp             SCEEEEEECSSS---EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTC-CCCEEEEETTTTEEEEEECCSG
T ss_pred             eEeeEEEEcCCC---cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhccccc-ccceEEEecCCCEEEEEcCccC
Confidence            568999999863   44454433     689999999876533222110 0011223 5689999986667778877   


Q ss_pred             CCCcEEEEec
Q psy6415         100 GSGSLNLWQL  109 (174)
Q Consensus       100 ~Dg~V~lWd~  109 (174)
                      .++.|.+||+
T Consensus       143 ~~~~i~v~d~  152 (343)
T 2qe8_A          143 DKAALIRVDL  152 (343)
T ss_dssp             GGCEEEEEET
T ss_pred             CCCeEEEEEC
Confidence            7899999999

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=97.99  E-value=0.00011  Score=60.83  Aligned_cols=103  Identities=11%  Similarity=-0.025  Sum_probs=66.8

Q ss_pred             EEEEecCC--cEEEEECCCCCeEEEe----e-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           2 VVAGYDNG--DLKMFDLKTMSLKWET----N-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         2 lasgs~Dg--~iklWDl~~~~~~~~~----~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      |+.+..++  .|.+||..++......    . ....+++++++|++   ..|..+..++.|+.||..+.... .+.....
T Consensus       185 l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~---g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~  260 (409)
T 3hrp_A          185 VYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETE---EWLYFVDSNKNFGRFNVKTQEVT-LIKQLEL  260 (409)
T ss_dssp             EEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTS---SEEEEECTTCEEEEEETTTCCEE-EEEECCC
T ss_pred             EEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCC---CeEEEEECCCcEEEEECCCCCEE-EEecccc
Confidence            44555545  7888888766543222    2 23557889999953   45555778899999999875421 1100001


Q ss_pred             cccCcCcE--EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 KAHKATTV--WAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ~~h~~~~i--~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .++.. .-  ..++|+|.++.++++-..+++|+.|+.
T Consensus       261 ~g~~~-~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~  296 (409)
T 3hrp_A          261 SGSLG-TNPGPYLIYYFVDSNFYMSDQNLSSVYKITP  296 (409)
T ss_dssp             CSCCC-CSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred             cCCCC-CCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence            12222 22  389999977889999999999999998

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=97.93  E-value=0.00021  Score=56.93  Aligned_cols=97  Identities=12%  Similarity=0.052  Sum_probs=61.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-cc-Cc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-AH-KA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~h-~~   79 (174)
                      ++++..++.|..||.++++... ......+.+++|+|++   +.++ ++.+ .|.+||.++.+...   +.... .. ..
T Consensus        64 ~~~d~~~~~i~~~d~~~~~~~~-~~~~~~v~~i~~~~dg---~l~v-~~~~-gl~~~d~~~g~~~~---~~~~~~~~~~~  134 (326)
T 2ghs_A           64 WWFNILERELHELHLASGRKTV-HALPFMGSALAKISDS---KQLI-ASDD-GLFLRDTATGVLTL---HAELESDLPGN  134 (326)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEE-EECSSCEEEEEEEETT---EEEE-EETT-EEEEEETTTCCEEE---EECSSTTCTTE
T ss_pred             EEEECCCCEEEEEECCCCcEEE-EECCCcceEEEEeCCC---eEEE-EECC-CEEEEECCCCcEEE---EeeCCCCCCCC
Confidence            4566678899999998876543 2345679999999863   5555 4444 49999988754221   11111 11 23


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCC----CcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGS----GSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~D----g~V~lWd~  109 (174)
                       .++.++++|++ .++++...+    +...||.+
T Consensus       135 -~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~  166 (326)
T 2ghs_A          135 -RSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHV  166 (326)
T ss_dssp             -EEEEEEECTTS-CEEEEEEETTCCTTCEEEEEE
T ss_pred             -CCCCEEECCCC-CEEEEeCCCcCCCCceEEEEE
Confidence             58999999954 566655322    34566666

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.93  E-value=3.1e-05  Score=68.14  Aligned_cols=99  Identities=11%  Similarity=0.174  Sum_probs=63.9

Q ss_pred             EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCc-------------EEEEECCCcccccceee
Q psy6415           5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAK-------------LFVFDLKTLHREKGFAY   71 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~-------------I~iWD~~~~~~~~~~~~   71 (174)
                      |+++.+|++||+.+++.+..........+++|+ ++   +.|+.++.|..             |++|++.+..... ..+
T Consensus       151 G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg---~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~~v  225 (693)
T 3iuj_A          151 GSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GN---EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDD-RLV  225 (693)
T ss_dssp             SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TT---TEEEEEESSCCC-------CCCCEEEEEETTSCGGGC-EEE
T ss_pred             CCceEEEEEEECCCCCCCccccCCceeccEEEe-CC---CEEEEEEecCcccccccccCCCcEEEEEECCCCcccc-eEE
Confidence            444568999999999865431111112467898 74   78888887744             9999998754321 122


Q ss_pred             eeecc-cCcCcEEEEEEcCCCCCEEEEEcC---CCcEEEEec
Q psy6415          72 LSEKA-HKATTVWAAKHLPQNRDLFVTCGG---SGSLNLWQL  109 (174)
Q Consensus        72 ~~~~~-h~~~~i~~v~fsP~~~~~las~s~---Dg~V~lWd~  109 (174)
                      ..... |.. .+.++.|+|++..++++.+.   +..|.+||+
T Consensus       226 ~~~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~  266 (693)
T 3iuj_A          226 FGAIPAQHH-RYVGATVTEDDRFLLISAANSTSGNRLYVKDL  266 (693)
T ss_dssp             ESCSGGGCC-SEEEEEECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred             EecCCCCCe-EEEEEEEcCCCCEEEEEEccCCCCcEEEEEEC
Confidence            23333 444 57899999976656555543   358999998

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=97.85  E-value=0.0017  Score=49.53  Aligned_cols=96  Identities=8%  Similarity=-0.065  Sum_probs=66.1

Q ss_pred             EEEecCCcEEEEECCCCCeEEE-ee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWE-TN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~-~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++...++.|.+||.. ++.... .. ....+.+|++++++   +.+++...++.|..||.. .+..    ......... 
T Consensus        35 v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~v~~~d~~-g~~~----~~~~~~~~~-  104 (300)
T 2qc5_A           35 FTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG---DIWFTENGANKIGKLSKK-GGFT----EYPLPQPDS-  104 (300)
T ss_dssp             EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECTT-SCEE----EEECSSTTC-
T ss_pred             EEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC---CEEEEecCCCeEEEECCC-CCeE----EecCCCCCC-
Confidence            344457889999988 655432 11 23568999999863   666776678899999987 3321    112222334 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..+++.| ++.++++...++.|..||.
T Consensus       105 ~~~~i~~~~-~g~l~v~~~~~~~i~~~~~  132 (300)
T 2qc5_A          105 GPYGITEGL-NGDIWFTQLNGDRIGKLTA  132 (300)
T ss_dssp             CEEEEEECS-TTCEEEEETTTTEEEEECT
T ss_pred             CCccceECC-CCCEEEEccCCCeEEEECC
Confidence            689999999 4578888887889999988

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.85  E-value=8.3e-05  Score=65.73  Aligned_cols=50  Identities=10%  Similarity=0.071  Sum_probs=32.9

Q ss_pred             CCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          52 EAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        52 Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +|+|+.||+++++.+     .....+ . +++...+... +.+++.|+.||.|+.||.
T Consensus       454 ~g~l~A~D~~tG~~~-----W~~~~~-~-~~~~g~~~ta-gglvf~gt~dg~l~a~D~  503 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAA-----WEVPYV-T-IFNGGTLSTA-GNLVFEGSADGRVIAYAA  503 (689)
T ss_dssp             EEEEEEEETTTTEEE-----EEEEES-S-SCCCCEEEET-TTEEEEECTTSEEEEEET
T ss_pred             ceeEEEEECCCCCeE-----eEccCC-C-CccCccceEC-CCEEEEECCCCcEEEEEC
Confidence            478999999887532     122122 2 3444445553 457777999999999999

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=97.82  E-value=0.00011  Score=60.86  Aligned_cols=99  Identities=10%  Similarity=-0.023  Sum_probs=65.6

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeee-ecc
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLS-EKA   76 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~-~~~   76 (174)
                      +++|.+.|..+++.+........-. ++++|++   ..|..++          .+++|.+||..+.+......+.. -+.
T Consensus        58 ~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG---~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~  133 (386)
T 3sjl_D           58 VTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDG---SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRF  133 (386)
T ss_dssp             SEEEEEEETTTTEEEEEEEECSSCE-EEECTTS---SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC
T ss_pred             CCEEEEEECCCCeEEEEEECCCCCc-EEECCCC---CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccc
Confidence            6899999999998876654333334 9999975   6665443          47889999999876443221100 000


Q ss_pred             -cCcCcEEEEEEcCCCCCEEEEEc-CCCcEEEEeccc
Q psy6415          77 -HKATTVWAAKHLPQNRDLFVTCG-GSGSLNLWQLVS  111 (174)
Q Consensus        77 -h~~~~i~~v~fsP~~~~~las~s-~Dg~V~lWd~~~  111 (174)
                       ... .-+.++|+|++..++++.. .+++|.++|+++
T Consensus       134 ~~g~-~P~~~a~spDGk~lyVan~~~~~~VsVID~~t  169 (386)
T 3sjl_D          134 LVGT-YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG  169 (386)
T ss_dssp             CBSC-CGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred             ccCC-CCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence             001 2357899997766666654 378999999954

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.81  E-value=5.3e-05  Score=66.86  Aligned_cols=97  Identities=11%  Similarity=0.126  Sum_probs=65.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCC------------CE------------------------EEEEecCCCCCCCE
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKN------------GV------------------------CGVDFDRRDIPMNK   45 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~------------~V------------------------~sv~f~~~~~~~~~   45 (174)
                      |+.++.+|.|.++|.++|+++.......            .+                        .+++|+|+.   ..
T Consensus       330 l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~---~~  406 (677)
T 1kb0_A          330 ILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT---GL  406 (677)
T ss_dssp             EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT---TE
T ss_pred             EEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC---CE
Confidence            6778899999999999999876543210            01                        146788863   55


Q ss_pred             EEEEeC-------------------------------------------CCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415          46 LVATTL-------------------------------------------EAKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus        46 l~s~s~-------------------------------------------Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      +.+.+.                                           .+.|..||+++++.+     ... .+.. ++
T Consensus       407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~-----W~~-~~~~-~~  479 (677)
T 1kb0_A          407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA-----WSV-EHVS-PW  479 (677)
T ss_dssp             EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE-----EEE-EESS-SC
T ss_pred             EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE-----eec-CCCC-CC
Confidence            555432                                           278999999887532     121 1223 45


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +...+.+.+ .+++.++.||.|++||.
T Consensus       480 ~~g~~~~~g-~~v~~g~~dg~l~a~D~  505 (677)
T 1kb0_A          480 NGGTLTTAG-NVVFQGTADGRLVAYHA  505 (677)
T ss_dssp             CCCEEEETT-TEEEEECTTSEEEEEET
T ss_pred             cCcceEeCC-CEEEEECCCCcEEEEEC
Confidence            555566644 46666899999999999

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=97.78  E-value=0.0025  Score=48.52  Aligned_cols=96  Identities=4%  Similarity=-0.125  Sum_probs=65.1

Q ss_pred             EEEecCCcEEEEECCCCCeEEE-ee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWE-TN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~-~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      ++...++.|..+|.. ++.... .. ....++++++++++   +..++...++.|..+|. +.+..    ......+.. 
T Consensus       119 v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g---~l~v~~~~~~~i~~~~~-~g~~~----~~~~~~~~~-  188 (300)
T 2qc5_A          119 FTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDN---ALWFTENQNNSIGRITN-TGKLE----EYPLPTNAA-  188 (300)
T ss_dssp             EEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS---SEEEEETTTTEEEEECT-TCCEE----EEECSSTTC-
T ss_pred             EEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCC---CEEEEecCCCeEEEECC-CCcEE----EeeCCCCCC-
Confidence            344447788889887 555422 22 23568999999864   66666667889999998 33321    111223334 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..+++.| ++.++++....+.|..||.
T Consensus       189 ~~~~i~~d~-~g~l~v~~~~~~~i~~~~~  216 (300)
T 2qc5_A          189 APVGITSGN-DGALWFVEIMGNKIGRITT  216 (300)
T ss_dssp             CEEEEEECT-TSSEEEEETTTTEEEEECT
T ss_pred             CcceEEECC-CCCEEEEccCCCEEEEEcC
Confidence            688999999 4578888877888999987

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=97.75  E-value=0.00025  Score=55.65  Aligned_cols=91  Identities=9%  Similarity=0.033  Sum_probs=53.6

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC------CcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE------AKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D------g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      +.|..||.++++..... .....+.++|+|++   +.|..+...      +.|.+||+.... ....... ...... ..
T Consensus       169 ~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg---~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~-~~~~~~-~p  241 (305)
T 3dr2_A          169 HSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDE---QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHF-ASVPDG-LP  241 (305)
T ss_dssp             EEEEEECSSSCCCEEEE-EESSEEEEEECTTS---SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEE-ECCSSS-CC
T ss_pred             CeEEEEcCCCCcEEEEe-cCCCCcceEEcCCC---CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEE-EECCCC-CC
Confidence            45677777666654333 33457889999974   666665544      789999987542 1100000 011122 34


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+++.++ +.+.+++ .+| |.+|+.
T Consensus       242 dgi~~d~~-G~lwv~~-~~g-v~~~~~  265 (305)
T 3dr2_A          242 DGFCVDRG-GWLWSSS-GTG-VCVFDS  265 (305)
T ss_dssp             CSEEECTT-SCEEECC-SSE-EEEECT
T ss_pred             CeEEECCC-CCEEEec-CCc-EEEECC
Confidence            56788885 4565544 454 888887

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.71  E-value=5.9e-05  Score=66.30  Aligned_cols=68  Identities=13%  Similarity=0.122  Sum_probs=44.1

Q ss_pred             CEEEEEecCCCCCCCEEEEE-----eCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc-
Q psy6415          30 GVCGVDFDRRDIPMNKLVAT-----TLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS-  103 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~-----s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~-  103 (174)
                      .+.+++|||++   ++||.+     +++.+|++||+.+++.+..    .+...   ...+++|+ ++. .|+.++.|.. 
T Consensus       130 ~l~~~~~SpDg---~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~----~~~~~---k~~~~~Ws-Dg~-~l~y~~~~~~~  197 (693)
T 3iuj_A          130 ALDQLSFSRDG---RILAYSLSLAGSDWREIHLMDVESKQPLET----PLKDV---KFSGISWL-GNE-GFFYSSYDKPD  197 (693)
T ss_dssp             EEEEEEECTTS---SEEEEEEECSSCCEEEEEEEETTTCSEEEE----EEEEE---ESCCCEEE-TTT-EEEEEESSCCC
T ss_pred             EEEEEEECCCC---CEEEEEEecCCCceEEEEEEECCCCCCCcc----ccCCc---eeccEEEe-CCC-EEEEEEecCcc
Confidence            47888999974   788743     3446899999998764311    11111   12467899 654 5566666643 


Q ss_pred             ------------EEEEec
Q psy6415         104 ------------LNLWQL  109 (174)
Q Consensus       104 ------------V~lWd~  109 (174)
                                  |++|++
T Consensus       198 ~~~~~~~~~~~~v~~~~l  215 (693)
T 3iuj_A          198 GSELSARTDQHKVYFHRL  215 (693)
T ss_dssp             -------CCCCEEEEEET
T ss_pred             cccccccCCCcEEEEEEC
Confidence                        889988

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=97.71  E-value=0.00036  Score=57.83  Aligned_cols=96  Identities=17%  Similarity=0.171  Sum_probs=63.3

Q ss_pred             EEecCCcEEEEECCCCCeEEE--ee-----------cCCCEEEEEecCCCCCCCEEEEEeC----------CCcEEEEEC
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWE--TN-----------LKNGVCGVDFDRRDIPMNKLVATTL----------EAKLFVFDL   60 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~--~~-----------~~~~V~sv~f~~~~~~~~~l~s~s~----------Dg~I~iWD~   60 (174)
                      -.+.+|+|.+.|+.+......  ..           ...+..-++++|++   +.|..+..          .+.|-+.|+
T Consensus       242 ~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~---~~lyV~~~~~~~~~hk~~~~~V~viD~  318 (386)
T 3sjl_D          242 WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL---DRIYLLVDQRDEWRHKTASRFVVVLDA  318 (386)
T ss_dssp             EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT---TEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred             EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC---CeEEEEeccccccccCCCCCEEEEEEC
Confidence            355678999999977653211  11           02233457778864   66554421          367999999


Q ss_pred             CCcccccceeeeeecccCcCcEEEEEEcCCCC-CEEEEEcCCCcEEEEec
Q psy6415          61 KTLHREKGFAYLSEKAHKATTVWAAKHLPQNR-DLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        61 ~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~-~~las~s~Dg~V~lWd~  109 (174)
                      ++.+.++.+.+    +  . .+|+++|+|++. .++++...+++|.++|.
T Consensus       319 ~t~kv~~~i~v----g--~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~  361 (386)
T 3sjl_D          319 KTGERLAKFEM----G--H-EIDSINVSQDEKPLLYALSTGDKTLYIHDA  361 (386)
T ss_dssp             TTCCEEEEEEE----E--E-EECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred             CCCeEEEEEEC----C--C-CcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence            99775543321    2  3 689999999765 35666777999999999

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.61  E-value=0.00083  Score=56.80  Aligned_cols=98  Identities=10%  Similarity=0.099  Sum_probs=63.6

Q ss_pred             cCCcEEEEECCCCCeEEEeecC---CCEEEEEe--cCCCCCCCEE-EEEe-----CCCcEEEEECCCcccccceeeeeec
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLK---NGVCGVDF--DRRDIPMNKL-VATT-----LEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~---~~V~sv~f--~~~~~~~~~l-~s~s-----~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      .+.+|.+||+.+++........   .....|.|  +|++   ..+ +++-     .+++|-+|....+.... .....+.
T Consensus       226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg---~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~vIdi~  301 (462)
T 2ece_A          226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTK---LMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EKVIEIP  301 (462)
T ss_dssp             SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTC---CEEEEEEEEETTTCCEEEEEEEEETTEEEE-EEEEEEC
T ss_pred             cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCC---CEEEEEEeeeccCCCceEEEEEecCCceeE-EEEEeCC
Confidence            3789999999988776665442   23444545  9874   554 4555     78899877665422100 0000000


Q ss_pred             cc----------------CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AH----------------KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h----------------~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..                .. ....|.+||+++.+++|.-..+.|.++|+
T Consensus       302 ~~~v~~~lp~~~~~f~~~~~-~pa~I~lS~DGrfLYVSnrg~d~VavfdV  350 (462)
T 2ece_A          302 AEPLEGNLPEILKPFKAVPP-LVTDIDISLDDKFLYLSLWGIGEVRQYDI  350 (462)
T ss_dssp             CEECCSSCCGGGGGGTEECC-CCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred             CccccccccccccccccCCC-ceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence            00                12 45788999998889999999999999999

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=97.46  E-value=0.0015  Score=52.20  Aligned_cols=97  Identities=13%  Similarity=0.105  Sum_probs=60.8

Q ss_pred             cCCcEEEEECCCCCeEEEeec------------------------------CCCEEEEEecCCCCCCCEEEEEeCCCcEE
Q psy6415           7 DNGDLKMFDLKTMSLKWETNL------------------------------KNGVCGVDFDRRDIPMNKLVATTLEAKLF   56 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~------------------------------~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~   56 (174)
                      .++.|.+||+.+++.......                              ...++.|+|+|++   +.|..+..++. +
T Consensus       143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg---~~ly~~~~~~~-~  218 (343)
T 2qe8_A          143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN---EWLYLSPMHST-S  218 (343)
T ss_dssp             GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS---CEEEEEESSCS-E
T ss_pred             CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCC---CEEEEEeCCCC-e
Confidence            678999999988765443211                              1246899999974   77877766664 5


Q ss_pred             EEECCCccc----c--cc-eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          57 VFDLKTLHR----E--KG-FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        57 iWD~~~~~~----~--~~-~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ||.+.....    .  .. +......++.. ....+++.|+ +.++++...++.|.+||.
T Consensus       219 l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g-~pdgia~d~~-G~l~va~~~~~~V~~~d~  276 (343)
T 2qe8_A          219 MYRIKSADLSNLQLTDAELGSKIERYSEKP-ICDGISIDKD-HNIYVGDLAHSAIGVITS  276 (343)
T ss_dssp             EEEEEHHHHTCTTCCHHHHHTTCEEEEECC-SCSCEEECTT-CCEEEEEGGGTEEEEEET
T ss_pred             EEEEEHHHhcCCCCChhhhhcceEecccCC-CCceEEECCC-CCEEEEccCCCeEEEEEC
Confidence            555432100    0  00 00001112333 4457889994 689999999999999998

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=97.44  E-value=0.00087  Score=56.17  Aligned_cols=98  Identities=12%  Similarity=-0.002  Sum_probs=64.4

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeeeecc--
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLSEKA--   76 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~~~~--   76 (174)
                      ++|.+.|+.+++.+........- .|+++|++   +.|..+.          .++.|.++|..+.+......+.....  
T Consensus        99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDg---k~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~  174 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDG---SFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL  174 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEECSSC-EEEECTTS---SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred             CeEEEEECCCCEEEEEEECCCCC-ceEECCCC---CEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc
Confidence            79999999999987765533333 89999975   6665543          47899999999876443221100000  


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEeccc
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQLVS  111 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~~~  111 (174)
                      ... .-..++|+|+++.++++.-. +++|.+.|+++
T Consensus       175 ~g~-~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t  209 (426)
T 3c75_H          175 VGT-YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG  209 (426)
T ss_dssp             BSC-CGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred             cCC-CcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence            011 23467899976666665443 68999999943

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=97.37  E-value=0.002  Score=52.67  Aligned_cols=96  Identities=14%  Similarity=0.039  Sum_probs=61.6

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeee-eecc-c
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYL-SEKA-H   77 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~-~~~~-h   77 (174)
                      +|.++|..+++.+........- .++|+|++   +.|..+.          .++.|.+||..+.+......+. .... +
T Consensus        48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg---~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~  123 (373)
T 2mad_H           48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSG---SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV  123 (373)
T ss_pred             EEEEEECCCCeEEEEecCCCCC-CeEECCCC---CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence            8899999999877555433333 89999975   7776654          4788999999876543222110 0000 0


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcC-CCcEEEEeccc
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGG-SGSLNLWQLVS  111 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~-Dg~V~lWd~~~  111 (174)
                      .. .-..++|+|+++.++++... +++|.++| ++
T Consensus       124 g~-~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t  156 (373)
T 2mad_H          124 GP-YSWMNANTPNNADLLFFQFAAGPAVGLVV-QG  156 (373)
T ss_pred             CC-CccceEECCCCCEEEEEecCCCCeEEEEE-CC
Confidence            11 23578999976655554433 58899999 76

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.29  E-value=0.00088  Score=58.36  Aligned_cols=97  Identities=13%  Similarity=0.165  Sum_probs=65.7

Q ss_pred             CcEEEEECCC--CCe-EEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccc-------cceeeeeeccc
Q psy6415           9 GDLKMFDLKT--MSL-KWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHRE-------KGFAYLSEKAH   77 (174)
Q Consensus         9 g~iklWDl~~--~~~-~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~-------~~~~~~~~~~h   77 (174)
                      +.|.+.|.++  ++. +..........++.++|++   .++ +++-.+.+|.++|+++.+..       ..........-
T Consensus       254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDG---k~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG  330 (595)
T 1fwx_A          254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDK---KHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG  330 (595)
T ss_dssp             TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTS---SEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC
T ss_pred             CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCC---CEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC
Confidence            4599999988  544 3344334456678999985   654 56668999999999964210       00001111111


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                       . .-+.++|+|++ ..+.+.-.|++|..||+++
T Consensus       331 -~-gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          331 -L-GPLHTAFDGRG-NAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             -S-CEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred             -C-CcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence             2 46899999966 7888999999999999944

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=97.27  E-value=0.0027  Score=53.67  Aligned_cols=94  Identities=15%  Similarity=0.195  Sum_probs=63.1

Q ss_pred             CcEEEEECCCCCeEEEeecC---CC-EEEEEecCCCCCCCEEEEEe-------------------CCCcEEEEECCCccc
Q psy6415           9 GDLKMFDLKTMSLKWETNLK---NG-VCGVDFDRRDIPMNKLVATT-------------------LEAKLFVFDLKTLHR   65 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~---~~-V~sv~f~~~~~~~~~l~s~s-------------------~Dg~I~iWD~~~~~~   65 (174)
                      |.|-+.|.++.+++......   .. -+.+.|+|+.   +.++++.                   .+.+|.+||+.+.+.
T Consensus       164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~---~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~  240 (462)
T 2ece_A          164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN---EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR  240 (462)
T ss_dssp             CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT---TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred             CeEEEEECCCCeEEEEEccCCCCccccceEEECCCC---CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE
Confidence            78999999999987665321   11 2346779974   7777774                   478999999987543


Q ss_pred             ccceeeeeecccCcCcEEEEEE--cCCCCCEEEEEc-----CCCcEEEEec
Q psy6415          66 EKGFAYLSEKAHKATTVWAAKH--LPQNRDLFVTCG-----GSGSLNLWQL  109 (174)
Q Consensus        66 ~~~~~~~~~~~h~~~~i~~v~f--sP~~~~~las~s-----~Dg~V~lWd~  109 (174)
                      .+.+.   . +..+..-..++|  +|++...++++-     .+++|.+|..
T Consensus       241 ~~tI~---v-g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~  287 (462)
T 2ece_A          241 IHSLT---L-GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY  287 (462)
T ss_dssp             EEEEE---S-CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred             eeEEe---c-CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence            32211   1 111103345656  997777777777     8889998887

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.20  E-value=0.011  Score=46.42  Aligned_cols=97  Identities=10%  Similarity=-0.007  Sum_probs=63.0

Q ss_pred             EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      .-.++.+.++|.++.+.+..+.....=..++++     +..|..+..+++|.++|.++.+......+.. .+..-..++.
T Consensus       112 tw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~D-----g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-~g~~v~~lNe  185 (268)
T 3nok_A          112 TWTEGLLFTWSGMPPQRERTTRYSGEGWGLCYW-----NGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-RGQPVELINE  185 (268)
T ss_dssp             ESSSCEEEEEETTTTEEEEEEECSSCCCCEEEE-----TTEEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEE
T ss_pred             EccCCEEEEEECCcCcEEEEEeCCCceeEEecC-----CCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-CCcccccccc
Confidence            446889999999999887766543322345544     2677776679999999999876543322211 0101013567


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.|.  ++.++|..-.+..|.+-|.
T Consensus       186 Le~~--dG~lyanvw~s~~I~vIDp  208 (268)
T 3nok_A          186 LECA--NGVIYANIWHSSDVLEIDP  208 (268)
T ss_dssp             EEEE--TTEEEEEETTCSEEEEECT
T ss_pred             cEEe--CCEEEEEECCCCeEEEEeC
Confidence            7776  4568887777778888777

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.19  E-value=0.00044  Score=61.09  Aligned_cols=85  Identities=12%  Similarity=0.103  Sum_probs=55.9

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      +|+|+.||+++++.++.......+.+-.+...   +..+++|+.|+.|+.||.++++.+-.+..    .+.. ...-+.|
T Consensus       454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta---gglvf~gt~dg~l~a~D~~tG~~lw~~~~----~~~~-~~~p~ty  525 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTA---GNLVFEGSADGRVIAYAADTGEKLWEQPA----ASGV-MAAPVTY  525 (689)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEET---TTEEEEECTTSEEEEEETTTCCEEEEEEC----SSCC-CSCCEEE
T ss_pred             ceeEEEEECCCCCeEeEccCCCCccCccceEC---CCEEEEECCCCcEEEEECCCCccceeeeC----CCCc-ccCceEE
Confidence            58899999999999887665443333233332   37889999999999999999875432211    1111 1234567


Q ss_pred             cCCCCCEEEEEcC
Q psy6415          88 LPQNRDLFVTCGG  100 (174)
Q Consensus        88 sP~~~~~las~s~  100 (174)
                      .+++.++++..+.
T Consensus       526 ~~~G~qyv~~~~G  538 (689)
T 1yiq_A          526 SVDGEQYVTFMAG  538 (689)
T ss_dssp             EETTEEEEEEEEC
T ss_pred             EECCEEEEEEEec
Confidence            7766666666554

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.16  E-value=0.0098  Score=46.14  Aligned_cols=97  Identities=12%  Similarity=0.083  Sum_probs=61.8

Q ss_pred             EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      .-.++.+.++|.++.+.+.++.....=..++.+     +..|..+..++.|.++|.++.+..+...+.. .+..-..++.
T Consensus        81 tw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~d-----g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~~~lNe  154 (243)
T 3mbr_X           81 TWRNHEGFVYDLATLTPRARFRYPGEGWALTSD-----DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPLDNLNE  154 (243)
T ss_dssp             ESSSSEEEEEETTTTEEEEEEECSSCCCEEEEC-----SSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEE
T ss_pred             EeeCCEEEEEECCcCcEEEEEeCCCCceEEeeC-----CCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCccccccee
Confidence            445889999999999887766543322455543     2556666678999999999876443322211 1111013566


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+.  ++.++|..-.+..|.+-|.
T Consensus       155 Le~~--~G~lyanvw~s~~I~vIDp  177 (243)
T 3mbr_X          155 LEWV--NGELLANVWLTSRIARIDP  177 (243)
T ss_dssp             EEEE--TTEEEEEETTTTEEEEECT
T ss_pred             eEEe--CCEEEEEECCCCeEEEEEC
Confidence            6665  4568887766778888887

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.14  E-value=0.029  Score=42.64  Aligned_cols=98  Identities=8%  Similarity=-0.016  Sum_probs=61.8

Q ss_pred             EEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      +-..++.|..+|+.++........ ......|+++|.+  +..+++-...+.|.++|+...... .  +  ....-. .-
T Consensus        53 ~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~--~~lyv~d~~~~~I~~~~~~g~~~~-~--~--~~~~~~-~P  124 (267)
T 1npe_A           53 TDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLG--RTIFWTDSQLDRIEVAKMDGTQRR-V--L--FDTGLV-NP  124 (267)
T ss_dssp             EETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCSCE-E--E--ECSSCS-SE
T ss_pred             EECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecC--CeEEEEECCCCEEEEEEcCCCCEE-E--E--EECCCC-Cc
Confidence            344567788888876554322222 2467899999853  244566667889999998753211 1  1  111112 45


Q ss_pred             EEEEEcCCCCCEEEEEcC--CCcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGG--SGSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~--Dg~V~lWd~  109 (174)
                      +.++++|+++.++++...  .+.|..+++
T Consensus       125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~  153 (267)
T 1npe_A          125 RGIVTDPVRGNLYWTDWNRDNPKIETSHM  153 (267)
T ss_dssp             EEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred             cEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence            899999976777777654  478888887

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=97.14  E-value=0.011  Score=46.51  Aligned_cols=98  Identities=11%  Similarity=0.064  Sum_probs=63.1

Q ss_pred             EEecCCcEEEEECCCCCeEEEeecC-CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNLK-NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~~-~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      +.-.++.|.++|..+.+.+..+... ..=..++.  ++   ..|..+..+++|.++|.++.+......+.. .+..-..+
T Consensus        81 ~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~--Dg---~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~-~~~p~~~~  154 (266)
T 2iwa_A           81 VVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLAT--DG---KILYGSDGTSILYEIDPHTFKLIKKHNVKY-NGHRVIRL  154 (266)
T ss_dssp             EETTCSEEEEEETTTTEEEEEEECCSSSCCEEEE--CS---SSEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCE
T ss_pred             EEecCCEEEEEECCCCcEEEEEECCCCCeEEEEE--CC---CEEEEECCCCeEEEEECCCCcEEEEEEECC-CCcccccc
Confidence            3446889999999998877665432 11133444  32   556666678999999998866443322211 01111036


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+.|.  ++.++|+...++.|.+-|.
T Consensus       155 nele~~--dg~lyvn~~~~~~V~vID~  179 (266)
T 2iwa_A          155 NELEYI--NGEVWANIWQTDCIARISA  179 (266)
T ss_dssp             EEEEEE--TTEEEEEETTSSEEEEEET
T ss_pred             eeEEEE--CCEEEEecCCCCeEEEEEC
Confidence            788888  3578888878889999888

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=97.13  E-value=0.011  Score=46.44  Aligned_cols=97  Identities=9%  Similarity=0.129  Sum_probs=62.3

Q ss_pred             EecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           5 GYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         5 gs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      .-.++.+.++|.++.+.+..+.....=..++++     +..|+.+..+++|.++|.++.+......+.. .+..-..++.
T Consensus       103 tw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~d-----g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~-~g~~~~~lNE  176 (262)
T 3nol_A          103 TWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHN-----DQYLIMSDGTPVLRFLDPESLTPVRTITVTA-HGEELPELNE  176 (262)
T ss_dssp             ESSSSEEEEEETTTCCEEEEEECSSCCCCEEEC-----SSCEEECCSSSEEEEECTTTCSEEEEEECEE-TTEECCCEEE
T ss_pred             EeeCCEEEEEECccCcEEEEEECCCCceEEecC-----CCEEEEECCCCeEEEEcCCCCeEEEEEEecc-CCccccccce
Confidence            345889999999999887766543222344443     2556666668899999999876443322211 1111114567


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.|.  ++.++|..-.+..|.+-|.
T Consensus       177 Le~~--~G~lyan~w~~~~I~vIDp  199 (262)
T 3nol_A          177 LEWV--DGEIFANVWQTNKIVRIDP  199 (262)
T ss_dssp             EEEE--TTEEEEEETTSSEEEEECT
T ss_pred             eEEE--CCEEEEEEccCCeEEEEEC
Confidence            7776  4578888777888888888

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=96.99  E-value=0.0068  Score=49.68  Aligned_cols=66  Identities=6%  Similarity=-0.049  Sum_probs=46.6

Q ss_pred             EEecCCCCCCCEEEEE-e---C-----CCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEc-CCCc
Q psy6415          34 VDFDRRDIPMNKLVAT-T---L-----EAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCG-GSGS  103 (174)
Q Consensus        34 v~f~~~~~~~~~l~s~-s---~-----Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s-~Dg~  103 (174)
                      ++|+|++   +.+..+ .   .     ++.+.++|+.+.+.+..+     ... . ..+.++|+|++..+|+++. .+++
T Consensus       269 v~~s~dg---~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i-----~vg-~-~p~gi~~s~Dg~~l~va~~~~~~~  338 (368)
T 1mda_H          269 VAKLKNT---DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI-----SNG-H-DSDAIIAAQDGASDNYANSAGTEV  338 (368)
T ss_dssp             EEEETTT---TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECC-----EEE-E-EECEEEECCSSSCEEEEEETTTTE
T ss_pred             eEEcCCC---CEEEEEeccccCcccccCCCEEEEECCCCeEEEEE-----ECC-C-CcceEEECCCCCEEEEEccCCCCe
Confidence            6788874   555543 3   2     235669999987644332     222 2 4689999997766888888 6999


Q ss_pred             EEEEec
Q psy6415         104 LNLWQL  109 (174)
Q Consensus       104 V~lWd~  109 (174)
                      |.++|+
T Consensus       339 VsVID~  344 (368)
T 1mda_H          339 LDIYDA  344 (368)
T ss_dssp             EEEEES
T ss_pred             EEEEEC
Confidence            999999

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=96.97  E-value=0.0035  Score=51.40  Aligned_cols=96  Identities=9%  Similarity=-0.135  Sum_probs=62.8

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe----------CCCcEEEEECCCcccccceeeeeeccc--
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT----------LEAKLFVFDLKTLHREKGFAYLSEKAH--   77 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s----------~Dg~I~iWD~~~~~~~~~~~~~~~~~h--   77 (174)
                      +|.+.|..+++.+........- .++|+|++   ..+..+.          .+++|.+||+.+.+......+.. ..+  
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg---~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~-~~~~~  121 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSG---SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD-APRFS  121 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC-EEEECTTS---SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT-SCSCC
T ss_pred             eEEEEECCCCeEEEEEeCCCCC-ceEECCCC---CEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCC-ccccc
Confidence            7889999999987765432222 79999975   6665554          47899999999976543321100 000  


Q ss_pred             -CcCcEEEEEEcCCCCCEEEEEcC-CCcEEE--Eeccc
Q psy6415          78 -KATTVWAAKHLPQNRDLFVTCGG-SGSLNL--WQLVS  111 (174)
Q Consensus        78 -~~~~i~~v~fsP~~~~~las~s~-Dg~V~l--Wd~~~  111 (174)
                       .. .-..++|+|+++.++++... +..|.+  +|.++
T Consensus       122 ~g~-~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          122 VGP-RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             BSC-CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             cCC-CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence             01 23478899977666665433 467888  99855

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=96.96  E-value=0.011  Score=48.17  Aligned_cols=89  Identities=10%  Similarity=-0.011  Sum_probs=61.6

Q ss_pred             cCCcEEEEECCCCCeEEEeecC--------CCEEEEEecCCCCCCCEEEEEeC--CCcEEEEECCCcccccceeeee-ec
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLK--------NGVCGVDFDRRDIPMNKLVATTL--EAKLFVFDLKTLHREKGFAYLS-EK   75 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~--------~~V~sv~f~~~~~~~~~l~s~s~--Dg~I~iWD~~~~~~~~~~~~~~-~~   75 (174)
                      .+++|.+||+.+.+.+......        ..-..++|+|++   ++|+.+..  ++.|.++| .+.+...     + + 
T Consensus        95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG---~~l~v~n~~~~~~v~viD-~t~~~~~-----~~i-  164 (373)
T 2mad_H           95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN---ADLLFFQFAAGPAVGLVV-QGGSSDD-----QLL-  164 (373)
T ss_pred             CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC---CEEEEEecCCCCeEEEEE-CCCCEEe-----EEc-
Confidence            4788999999988776544321        224578999975   78877763  58899999 8865322     2 1 


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .-..    ++.+.|.++..+++.+.||++.++|.
T Consensus       165 ~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~  194 (373)
T 2mad_H          165 SSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH  194 (373)
T ss_pred             CCCc----eEEEEeCCCceEEEEcCCCCEEEEEC
Confidence            1112    24566766677888889999888887

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=96.92  E-value=0.0078  Score=47.39  Aligned_cols=95  Identities=18%  Similarity=0.203  Sum_probs=63.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      .++.+.+|.|+..|+++++..... ......  .+++..+    ...++.-.++.+.++|.++.+.+..+.     . ..
T Consensus        68 y~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~----~Ly~ltw~~~~v~V~D~~Tl~~~~ti~-----~-~~  136 (268)
T 3nok_A           68 FESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGE----RLYQLTWTEGLLFTWSGMPPQRERTTR-----Y-SG  136 (268)
T ss_dssp             EEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSS----CEEEEESSSCEEEEEETTTTEEEEEEE-----C-SS
T ss_pred             EEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCC----EEEEEEccCCEEEEEECCcCcEEEEEe-----C-CC
Confidence            467788899999999999987665 444433  3666542    555667789999999999876544332     1 12


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                       .=|.++  ++++.+++| ..+++|.++|.++
T Consensus       137 -eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T  164 (268)
T 3nok_A          137 -EGWGLC--YWNGKLVRS-DGGTMLTFHEPDG  164 (268)
T ss_dssp             -CCCCEE--EETTEEEEE-CSSSEEEEECTTT
T ss_pred             -ceeEEe--cCCCEEEEE-CCCCEEEEEcCCC
Confidence             225555  334445554 5688999999843

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=96.91  E-value=0.0032  Score=54.57  Aligned_cols=25  Identities=16%  Similarity=0.038  Sum_probs=21.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN   26 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~   26 (174)
                      |+.++.+|.+.++|.++|+++....
T Consensus       339 v~~~~~~G~l~~lD~~tG~~lw~~~  363 (582)
T 1flg_A          339 TAHADRNGFFYVVDRSNGKLQNAFP  363 (582)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEECCCceEEEEECCCCCEecccc
Confidence            5678899999999999999876543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=96.91  E-value=0.0019  Score=56.90  Aligned_cols=93  Identities=13%  Similarity=0.156  Sum_probs=62.4

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEc
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHL   88 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fs   88 (174)
                      |.|..||+++++.++...+...+.+..+...   +..++.++.|+.+++||.++++.+..+.+    .+.. ...-+.|.
T Consensus       457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~---g~~v~~g~~dg~l~a~D~~tG~~lw~~~~----~~~~-~~~p~~y~  528 (677)
T 1kb0_A          457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA---GNVVFQGTADGRLVAYHAATGEKLWEAPT----GTGV-VAAPSTYM  528 (677)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEET---TTEEEEECTTSEEEEEETTTCCEEEEEEC----SSCC-CSCCEEEE
T ss_pred             cEEEEEeCCCCcEEeecCCCCCCcCcceEeC---CCEEEEECCCCcEEEEECCCCceeeeeeC----CCCc-ccCCEEEE
Confidence            8899999999999888765544444444443   36888899999999999999876543321    2211 22345566


Q ss_pred             CCCCCEEEEEcC----------------CCcEEEEec
Q psy6415          89 PQNRDLFVTCGG----------------SGSLNLWQL  109 (174)
Q Consensus        89 P~~~~~las~s~----------------Dg~V~lWd~  109 (174)
                      +++..+++..+.                .+.+..|.+
T Consensus       529 ~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l  565 (677)
T 1kb0_A          529 VDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVV  565 (677)
T ss_dssp             ETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEE
T ss_pred             eCCEEEEEEeccCCccccccccccccCCCCeEEEEec
Confidence            655556565433                467888887

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=96.74  E-value=0.0062  Score=52.58  Aligned_cols=25  Identities=16%  Similarity=0.021  Sum_probs=20.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN   26 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~   26 (174)
                      |+.+..+|.+.+.|.++|+.+....
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w~~~  343 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIVAEK  343 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEeCCCcEEEEEECCCCCEEeeec
Confidence            4568889999999999999876643

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=96.68  E-value=0.014  Score=48.75  Aligned_cols=94  Identities=12%  Similarity=0.182  Sum_probs=57.7

Q ss_pred             ecCCcEEEEECCCCCeEEEe--e-----------cCCCEEEEEecCCCCCCCEEEEE-e---------CCCcEEEEECCC
Q psy6415           6 YDNGDLKMFDLKTMSLKWET--N-----------LKNGVCGVDFDRRDIPMNKLVAT-T---------LEAKLFVFDLKT   62 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~--~-----------~~~~V~sv~f~~~~~~~~~l~s~-s---------~Dg~I~iWD~~~   62 (174)
                      +..++|.+.|+.++......  .           ...+...++|+|++   +.+..+ .         .++.|.+.|+++
T Consensus       283 s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg---~rlyVa~~~~~~gthk~~s~~VsVID~~T  359 (426)
T 3c75_H          283 TYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS---DRIYLLVDQRDEWKHKAASRFVVVLNAET  359 (426)
T ss_dssp             BTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG---TEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred             eCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC---CEEEEEecccccccccCCCCEEEEEECCC
Confidence            34677888888655432110  0           01222236888864   555443 2         245799999998


Q ss_pred             cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEc-CCCcEEEEec
Q psy6415          63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCG-GSGSLNLWQL  109 (174)
Q Consensus        63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s-~Dg~V~lWd~  109 (174)
                      .+.+..+.+    +  . ..+.++|+|++..++.++. .+++|.++|+
T Consensus       360 ~kvv~~I~v----g--~-~P~gia~spDg~~~lyv~n~~s~~VsVID~  400 (426)
T 3c75_H          360 GERINKIEL----G--H-EIDSINVSQDAEPLLYALSAGTQTLHIYDA  400 (426)
T ss_dssp             CCEEEEEEE----E--E-EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred             CeEEEEEEC----C--C-CcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence            765433221    1  2 4689999997652444554 7999999999

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.67  E-value=0.074  Score=44.06  Aligned_cols=92  Identities=9%  Similarity=0.087  Sum_probs=56.6

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeC-CC----cEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTL-EA----KLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~-Dg----~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      +.|+.+|+.++.+..........+.|+|++++   +.|..+.. ++    .+.+.+. .......   ..+.. -. ..+
T Consensus       159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G---~~lyvad~~~~~~~~~v~~~~~-~g~~~~~---~~l~~-~~-~p~  229 (430)
T 3tc9_A          159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEA---DSMIITNDQNNNDRPNNYILTR-ESGFKVI---TELTK-GQ-NCN  229 (430)
T ss_dssp             EEEEEEETTTTEEEEEECCCSCEEEEEECTTS---SEEEEEECCSCTTSEEEEEEEG-GGTSCSE---EEEEE-CS-SCC
T ss_pred             CcEEEEECCCCEEEEEecCCCCcceEEEeCCC---CEEEEEeCCCCcccceEEEEeC-CCceeee---eeecc-CC-Cce
Confidence            77888898877655444334568899999974   64544433 22    2333443 2221100   11111 12 346


Q ss_pred             EEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          84 AAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .++++|+++.++++-..++.|..++.
T Consensus       230 giavdp~~g~lyv~d~~~~~V~~~~~  255 (430)
T 3tc9_A          230 GAETHPINGELYFNSWNAGQVFRYDF  255 (430)
T ss_dssp             CEEECTTTCCEEEEETTTTEEEEEET
T ss_pred             EEEEeCCCCEEEEEECCCCEEEEEEC
Confidence            78899977788888888899999998

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=96.64  E-value=0.02  Score=44.89  Aligned_cols=95  Identities=15%  Similarity=0.201  Sum_probs=60.9

Q ss_pred             EEEEecCC--cEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYDNG--DLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~Dg--~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      ..|.+.+|  .|+..|+++++............  .+++..+    ...++.-.++.+.++|.++.+.+..+.     . 
T Consensus        56 yestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~----~ly~ltw~~~~v~v~D~~t~~~~~ti~-----~-  125 (262)
T 3nol_A           56 YESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD----KIVGLTWKNGLGFVWNIRNLRQVRSFN-----Y-  125 (262)
T ss_dssp             EEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT----EEEEEESSSSEEEEEETTTCCEEEEEE-----C-
T ss_pred             EEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC----EEEEEEeeCCEEEEEECccCcEEEEEE-----C-
Confidence            34566666  99999999999887665444443  3555431    344556679999999999876544332     1 


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      .. .=|.++  ++++.+++|- .+++|.++|.+
T Consensus       126 ~~-eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~  154 (262)
T 3nol_A          126 DG-EGWGLT--HNDQYLIMSD-GTPVLRFLDPE  154 (262)
T ss_dssp             SS-CCCCEE--ECSSCEEECC-SSSEEEEECTT
T ss_pred             CC-CceEEe--cCCCEEEEEC-CCCeEEEEcCC
Confidence            11 224444  4455566654 47889999984

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=96.55  E-value=0.026  Score=43.65  Aligned_cols=92  Identities=11%  Similarity=0.060  Sum_probs=58.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |..|+.++.|..+|.+ ++..+.... ...+.++...++    ..|..++.++.|..+|.. ++...     ....... 
T Consensus       110 l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~----g~l~vgt~~~~l~~~d~~-g~~~~-----~~~~~~~-  177 (330)
T 3hxj_A          110 LYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSED----GTIYVGSNDNYLYAINPD-GTEKW-----RFKTNDA-  177 (330)
T ss_dssp             EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTT----SCEEEECTTSEEEEECTT-SCEEE-----EEECSSC-
T ss_pred             EEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCC----CEEEEEcCCCEEEEECCC-CCEeE-----EEecCCC-
Confidence            4567788999999998 776655443 233555666654    457778889999999988 44221     1112223 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++.+.+ ++.++++ +  +.|..+|.
T Consensus       178 ~~~~~~~d~-~g~l~v~-t--~~l~~~d~  202 (330)
T 3hxj_A          178 ITSAASIGK-DGTIYFG-S--DKVYAINP  202 (330)
T ss_dssp             CCSCCEECT-TCCEEEE-S--SSEEEECT
T ss_pred             ceeeeEEcC-CCEEEEE-e--CEEEEECC
Confidence            455666666 4456554 3  77888884

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=96.51  E-value=0.058  Score=40.94  Aligned_cols=93  Identities=13%  Similarity=0.050  Sum_probs=62.1

Q ss_pred             CcEEEEECCCCCeE-----EEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcE
Q psy6415           9 GDLKMFDLKTMSLK-----WETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTV   82 (174)
Q Consensus         9 g~iklWDl~~~~~~-----~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i   82 (174)
                      +.|+.+|+.+....     .... ....+..+++++.+  +..+++-...+.|..+|+......     ........ ..
T Consensus        10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~--~~ly~~d~~~~~I~~~~~~g~~~~-----~~~~~~~~-~p   81 (267)
T 1npe_A           10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVD--KVVYWTDISEPSIGRASLHGGEPT-----TIIRQDLG-SP   81 (267)
T ss_dssp             EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTT--TEEEEEETTTTEEEEEESSSCCCE-----EEECTTCC-CE
T ss_pred             CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCC--CEEEEEECCCCEEEEEecCCCCcE-----EEEECCCC-Cc
Confidence            57999998765421     1111 12346789999853  244556667889999999764321     11111113 56


Q ss_pred             EEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          83 WAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        83 ~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+++.|.++.++++-...++|.++++
T Consensus        82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~  108 (267)
T 1npe_A           82 EGIALDHLGRTIFWTDSQLDRIEVAKM  108 (267)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             cEEEEEecCCeEEEEECCCCEEEEEEc
Confidence            899999977778888888999999998

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=96.37  E-value=0.054  Score=41.92  Aligned_cols=95  Identities=18%  Similarity=0.219  Sum_probs=61.5

Q ss_pred             EEEecC--CcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           3 VAGYDN--GDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         3 asgs~D--g~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      .|.+.+  ..|+..|+++++............  .+++..    ....+..-.++.+.++|.++.+.+..+.     . .
T Consensus        35 estG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~----~~ly~ltw~~~~v~v~D~~tl~~~~ti~-----~-~  104 (243)
T 3mbr_X           35 ESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR----DRLIQLTWRNHEGFVYDLATLTPRARFR-----Y-P  104 (243)
T ss_dssp             EEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET----TEEEEEESSSSEEEEEETTTTEEEEEEE-----C-S
T ss_pred             EECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC----CEEEEEEeeCCEEEEEECCcCcEEEEEe-----C-C
Confidence            445554  489999999999887665444432  344443    1445566789999999999876544332     1 1


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      . .=|.++  ++++.+++|- .+++|.++|.++
T Consensus       105 ~-~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t  133 (243)
T 3mbr_X          105 G-EGWALT--SDDSHLYMSD-GTAVIRKLDPDT  133 (243)
T ss_dssp             S-CCCEEE--ECSSCEEEEC-SSSEEEEECTTT
T ss_pred             C-CceEEe--eCCCEEEEEC-CCCeEEEEeCCC
Confidence            2 225655  4455666665 588999999843

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=96.30  E-value=0.042  Score=43.04  Aligned_cols=101  Identities=13%  Similarity=-0.021  Sum_probs=70.5

Q ss_pred             EEecCCcEEEEECCCCCeEEEeecC------CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec--
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNLK------NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK--   75 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~~------~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~--   75 (174)
                      .+..+++|.+.|..+.+........      ..++.+.|. +   +...+....++.|.+-|.++.+....+....+.  
T Consensus       121 vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d---g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~  196 (266)
T 2iwa_A          121 GSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N---GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKK  196 (266)
T ss_dssp             EECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T---TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHH
T ss_pred             EECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C---CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccc
Confidence            3446789999999998876554321      247788887 3   244555567899999999998754433221110  


Q ss_pred             ----ccC--cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          76 ----AHK--ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        76 ----~h~--~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                          .+.  . ..+.|+|+|++..+|+|+...++|..-++
T Consensus       197 ~~~~~~~~~~-v~nGIa~~~~~~~lfVTgk~~~~v~~i~l  235 (266)
T 2iwa_A          197 LIDEGFRDID-VLNGIAWDQENKRIFVTGKLWPKLFEIKL  235 (266)
T ss_dssp             HHHTTCTTCC-CEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred             cccccccccC-ceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence                011  2 46899999988889999999999988888

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=96.28  E-value=0.19  Score=39.84  Aligned_cols=93  Identities=17%  Similarity=0.219  Sum_probs=61.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-ccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-AHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~h~~~   80 (174)
                      |..++.+|.|..+|.++++.++.... ....++....     +.|..++.++.|..+|.++++..-     ... .... 
T Consensus       242 v~~~~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~-----~~l~~~~~~g~l~~~d~~tG~~~w-----~~~~~~~~-  309 (376)
T 3q7m_A          242 VFALAYNGNLTALDLRSGQIMWKREL-GSVNDFIVDG-----NRIYLVDQNDRVMALTIDGGVTLW-----TQSDLLHR-  309 (376)
T ss_dssp             EEEECTTSCEEEEETTTCCEEEEECC-CCEEEEEEET-----TEEEEEETTCCEEEEETTTCCEEE-----EECTTTTS-
T ss_pred             EEEEecCcEEEEEECCCCcEEeeccC-CCCCCceEEC-----CEEEEEcCCCeEEEEECCCCcEEE-----eecccCCC-
Confidence            45677899999999999998876543 3345555542     678888899999999998875321     111 0111 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.+....  ++ .+..++.+|.|..+|.
T Consensus       310 ~~~~~~~~--~~-~l~v~~~~g~l~~~d~  335 (376)
T 3q7m_A          310 LLTSPVLY--NG-NLVVGDSEGYLHWINV  335 (376)
T ss_dssp             CCCCCEEE--TT-EEEEECTTSEEEEEET
T ss_pred             cccCCEEE--CC-EEEEEeCCCeEEEEEC
Confidence            11122222  33 5666888999999998

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=96.12  E-value=0.0042  Score=54.10  Aligned_cols=58  Identities=21%  Similarity=0.314  Sum_probs=43.9

Q ss_pred             EEEEecCCcEEEEECCCCC------------eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           2 VVAGYDNGDLKMFDLKTMS------------LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~------------~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      ++++-.+.+|.++|+.+.+            .........+-..++|+|+   ++..++.-.|++|.+||+.+
T Consensus       292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~d---G~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGR---GNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTT---SEEEEEETTTTEEEEEEHHH
T ss_pred             EEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCC---CeEEEEEecCCcEEEEEhhH
Confidence            5677778999999998652            2223334567889999997   35567788999999999976

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=96.09  E-value=0.36  Score=37.57  Aligned_cols=91  Identities=11%  Similarity=0.034  Sum_probs=53.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee--------------------cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN--------------------LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK   61 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~--------------------~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~   61 (174)
                      +.++..++.|..||.+++.......                    .......|++++.+   ..|..+...+.|..+|..
T Consensus        33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~---g~l~v~d~~~~i~~~d~~  109 (322)
T 2fp8_A           33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN---NQLYIVDCYYHLSVVGSE  109 (322)
T ss_dssp             EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT---TEEEEEETTTEEEEECTT
T ss_pred             EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCC---CcEEEEECCCCEEEEeCC
Confidence            5677788999999988765542211                    01357889999732   456666555668889977


Q ss_pred             Ccccccceeeeeeccc-CcCcEEEEEEcC-CCCCEEEEEc
Q psy6415          62 TLHREKGFAYLSEKAH-KATTVWAAKHLP-QNRDLFVTCG   99 (174)
Q Consensus        62 ~~~~~~~~~~~~~~~h-~~~~i~~v~fsP-~~~~~las~s   99 (174)
                      +.... .+ .....+. -. ..+.+++.| ++ .++++-.
T Consensus       110 ~g~~~-~~-~~~~~~~~~~-~p~~i~~d~~~G-~l~v~d~  145 (322)
T 2fp8_A          110 GGHAT-QL-ATSVDGVPFK-WLYAVTVDQRTG-IVYFTDV  145 (322)
T ss_dssp             CEECE-EE-ESEETTEECS-CEEEEEECTTTC-CEEEEES
T ss_pred             CCEEE-Ee-cccCCCCccc-ccceEEEecCCC-EEEEECC
Confidence            54211 11 0011111 12 467899998 65 5666543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=95.89  E-value=0.17  Score=40.17  Aligned_cols=96  Identities=13%  Similarity=0.104  Sum_probs=61.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec----------CCCE-EEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL----------KNGV-CGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~----------~~~V-~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~   70 (174)
                      |..++.++.|..+|.++++.++....          ...+ ..+...     +..+..++.++.|..+|.++++.+-.+.
T Consensus        56 v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~v~~~~g~l~a~d~~tG~~~W~~~  130 (376)
T 3q7m_A           56 VYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS-----GGHVYIGSEKAQVYALNTSDGTVAWQTK  130 (376)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE-----TTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             EEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe-----CCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence            56677889999999999998876554          2233 233333     2678889999999999999876431111


Q ss_pred             eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          71 YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        71 ~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                           .... ........  ++ .+..++.+|.|..+|.++
T Consensus       131 -----~~~~-~~~~p~~~--~~-~v~v~~~~g~l~~~d~~t  162 (376)
T 3q7m_A          131 -----VAGE-ALSRPVVS--DG-LVLIHTSNGQLQALNEAD  162 (376)
T ss_dssp             -----CSSC-CCSCCEEE--TT-EEEEECTTSEEEEEETTT
T ss_pred             -----CCCc-eEcCCEEE--CC-EEEEEcCCCeEEEEECCC
Confidence                 1111 00011111  33 556678899999999844

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.80  E-value=0.37  Score=38.50  Aligned_cols=94  Identities=12%  Similarity=0.025  Sum_probs=56.5

Q ss_pred             CCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .+.|..+++.++....... .......|++++.+  ++.+++-...+.|.+.|+......  .   .+...-. .-+.++
T Consensus        94 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~--g~ly~~d~~~~~I~~~~~dG~~~~--~---l~~~~l~-~P~~ia  165 (349)
T 3v64_C           94 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVH--DKLYWTDSGTSRIEVANLDGAHRK--V---LLWQSLE-KPRAIA  165 (349)
T ss_dssp             TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT--TEEEEEETTTTEEEEEETTSCSCE--E---EECTTCS-CEEEEE
T ss_pred             CCceEEEecCCCCceEEEeCCCCCccEEEEecCC--CeEEEEcCCCCeEEEEcCCCCceE--E---EEeCCCC-CcceEE
Confidence            3444555554443222111 11334678888643  355567677889999998764311  1   1112223 468999


Q ss_pred             EcCCCCCEEEEEcCC-CcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGS-GSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~D-g~V~lWd~  109 (174)
                      +.|.++.++.|-... +.|...++
T Consensus       166 vdp~~g~ly~td~~~~~~I~r~~~  189 (349)
T 3v64_C          166 LHPMEGTIYWTDWGNTPRIEASSM  189 (349)
T ss_dssp             EETTTTEEEEEECSSSCEEEEEET
T ss_pred             EecCcCeEEEeccCCCCEEEEEeC
Confidence            999878888887777 88888887

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=95.79  E-value=0.31  Score=37.92  Aligned_cols=92  Identities=11%  Similarity=-0.035  Sum_probs=55.3

Q ss_pred             CCcEEEEECCCCCeEEEee-----cCCCEEEEEecC-CCCCCCEEEEEeC-----------------CCcEEEEECCCcc
Q psy6415           8 NGDLKMFDLKTMSLKWETN-----LKNGVCGVDFDR-RDIPMNKLVATTL-----------------EAKLFVFDLKTLH   64 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~-----~~~~V~sv~f~~-~~~~~~~l~s~s~-----------------Dg~I~iWD~~~~~   64 (174)
                      .+.|..+|.+++.......     .....+.|+++| ++   +..++...                 ++.|..||..+.+
T Consensus       100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G---~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~  176 (322)
T 2fp8_A          100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG---IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE  176 (322)
T ss_dssp             TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC---CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred             CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC---EEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence            3447777776554322111     113478899998 64   66665432                 3678888876543


Q ss_pred             cccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          65 REKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        65 ~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ... + .    ..-. .-+.++|+|++..++++-+..+.|..|++
T Consensus       177 ~~~-~-~----~~~~-~p~gia~~~dg~~lyv~d~~~~~I~~~~~  214 (322)
T 2fp8_A          177 TTL-L-L----KELH-VPGGAEVSADSSFVLVAEFLSHQIVKYWL  214 (322)
T ss_dssp             EEE-E-E----EEES-CCCEEEECTTSSEEEEEEGGGTEEEEEES
T ss_pred             EEE-e-c----cCCc-cCcceEECCCCCEEEEEeCCCCeEEEEEC
Confidence            210 0 0    1111 34678999965557777778899999998

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=95.64  E-value=0.15  Score=39.25  Aligned_cols=92  Identities=12%  Similarity=0.110  Sum_probs=57.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      |..|+.++.|..+|.+ ++..+.... ...+.++.++++    ..|..++  +.|..+| ++.+..     ........ 
T Consensus       150 l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~----g~l~v~t--~~l~~~d-~~g~~~-----~~~~~~~~-  215 (330)
T 3hxj_A          150 IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKD----GTIYFGS--DKVYAIN-PDGTEK-----WNFYAGYW-  215 (330)
T ss_dssp             EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTT----CCEEEES--SSEEEEC-TTSCEE-----EEECCSSC-
T ss_pred             EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCC----CEEEEEe--CEEEEEC-CCCcEE-----EEEccCCc-
Confidence            5567788999999998 776655443 344566667654    3455555  8899999 554321     12222334 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++...++ +.+++ ++.++.|..+|.
T Consensus       216 ~~~~~~~~~~-g~l~v-~t~~~gl~~~~~  242 (330)
T 3hxj_A          216 TVTRPAISED-GTIYV-TSLDGHLYAINP  242 (330)
T ss_dssp             CCSCCEECTT-SCEEE-EETTTEEEEECT
T ss_pred             ceeceEECCC-CeEEE-EcCCCeEEEECC
Confidence            5777778774 45555 556777777765

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=95.54  E-value=0.059  Score=47.23  Aligned_cols=51  Identities=8%  Similarity=0.085  Sum_probs=31.7

Q ss_pred             CCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          51 LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        51 ~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+|.|.-||+++++.+     ..... .. +.+...+.. .+.+++.++.||.|+.||.
T Consensus       436 ~~g~l~A~D~~tG~~~-----W~~~~-~~-~~~~~~~~t-~gg~vf~g~~dg~l~a~d~  486 (668)
T 1kv9_A          436 VSGALLAWDPVKQKAA-----WKVPY-PT-HWNGGTLST-AGNLVFQGTAAGQMHAYSA  486 (668)
T ss_dssp             CEEEEEEEETTTTEEE-----EEEEE-SS-SCCCCEEEE-TTTEEEEECTTSEEEEEET
T ss_pred             ccceEEEEeCCCCcEE-----EEccC-CC-CCcCceeEe-CCCEEEEECCcccchhhhh
Confidence            3488999999887532     11111 12 233333344 3346677899999999999

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.49  E-value=0.47  Score=38.44  Aligned_cols=95  Identities=12%  Similarity=0.049  Sum_probs=63.5

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      ....|+..|+.+...............|+|++..  +..+.+-...+.|..+++.......     .+..... ....++
T Consensus        94 ~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~--~~ly~~D~~~~~I~r~~~~g~~~~~-----~~~~~~~-~p~gla  165 (386)
T 3v65_B           94 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRR--ELVFWSDVTLDRILRANLNGSNVEE-----VVSTGLE-SPGGLA  165 (386)
T ss_dssp             CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCCEEE-----EECSSCS-CCCCEE
T ss_pred             cCccceeeccCCCcEEEEecCCCccEEEEEecCC--CeEEEEeCCCCcEEEEecCCCCcEE-----EEeCCCC-CccEEE
Confidence            3467888888776654444444568899999753  2444566678899999988643111     1111112 345788


Q ss_pred             EcCCCCCEEEEEcCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.|.++.++.+-...+.|.+.++
T Consensus       166 vd~~~g~lY~~d~~~~~I~~~~~  188 (386)
T 3v65_B          166 VDWVHDKLYWTDSGTSRIEVANL  188 (386)
T ss_dssp             EETTTTEEEEEETTTTEEEECBT
T ss_pred             EEeCCCeEEEEcCCCCeEEEEeC
Confidence            88877788888888889998888

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=95.48  E-value=0.61  Score=36.54  Aligned_cols=95  Identities=15%  Similarity=0.033  Sum_probs=54.9

Q ss_pred             cCCcEEEEECCC----CCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           7 DNGDLKMFDLKT----MSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         7 ~Dg~iklWDl~~----~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      .++.|..+|+.+    ........ .-.....|++++.+  ++.+++-...+.|.+.|+...... .  +  ....-. .
T Consensus        50 ~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~--~~ly~~d~~~~~I~~~~~~g~~~~-~--~--~~~~~~-~  121 (316)
T 1ijq_A           50 SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH--SNIYWTDSVLGTVSVADTKGVKRK-T--L--FRENGS-K  121 (316)
T ss_dssp             TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT--TEEEEEETTTTEEEEEETTSSSEE-E--E--EECTTC-C
T ss_pred             CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC--CeEEEEECCCCEEEEEeCCCCceE-E--E--EECCCC-C
Confidence            346666666654    11111111 11345678887643  345566678889999998764311 1  1  111223 5


Q ss_pred             EEEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGS-GSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~D-g~V~lWd~  109 (174)
                      -+.+++.|.++.++.+.... +.|...++
T Consensus       122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~  150 (316)
T 1ijq_A          122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGL  150 (316)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred             cceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence            68999999777787776554 78888777

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.43  E-value=0.29  Score=39.70  Aligned_cols=94  Identities=12%  Similarity=0.025  Sum_probs=55.6

Q ss_pred             CCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .+.|..+++.++....... .......|++++.+  ++.+++-...+.|.+.|+......  .   .+...-. .-+.++
T Consensus       137 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~--g~lY~~d~~~~~I~~~~~dg~~~~--~---l~~~~l~-~P~gia  208 (386)
T 3v65_B          137 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVH--DKLYWTDSGTSRIEVANLDGAHRK--V---LLWQSLE-KPRAIA  208 (386)
T ss_dssp             TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTT--TEEEEEETTTTEEEECBTTSCSCE--E---EECSSCS-CEEEEE
T ss_pred             CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCC--CeEEEEcCCCCeEEEEeCCCCceE--E---eecCCCC-CCcEEE
Confidence            4455555555443322211 11234567777643  345566677788998888753211  0   1112223 468999


Q ss_pred             EcCCCCCEEEEEcCC-CcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGS-GSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~D-g~V~lWd~  109 (174)
                      +.|.++.++.+-... +.|...++
T Consensus       209 vdp~~g~ly~td~~~~~~I~r~~~  232 (386)
T 3v65_B          209 LHPMEGTIYWTDWGNTPRIEASSM  232 (386)
T ss_dssp             EETTTTEEEEEECSSSCEEEEEET
T ss_pred             EEcCCCeEEEeccCCCCEEEEEeC
Confidence            999878788887766 78888887

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.34  E-value=0.68  Score=36.96  Aligned_cols=94  Identities=12%  Similarity=0.041  Sum_probs=62.5

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      ...|+..++.+...............|+|++..  +..+.+-...+.|..+++.......     .....-. ....+++
T Consensus        52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~--~~ly~~D~~~~~I~r~~~~g~~~~~-----~~~~~~~-~p~glav  123 (349)
T 3v64_C           52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRR--ELVFWSDVTLDRILRANLNGSNVEE-----VVSTGLE-SPGGLAV  123 (349)
T ss_dssp             BSCEEEECTTSCCEEEEECSCSCEEEEEEETTT--TEEEEEETTTTEEEEEETTSCSCEE-----EECSSCS-CCCEEEE
T ss_pred             ccceEEEeCCCCeeEEeecCCCceEEEEEeccc--cEEEEEeccCCceEEEecCCCCceE-----EEeCCCC-CccEEEE
Confidence            456777788766554444334568899999753  2344565678899999988643211     1111112 3467888


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++.++.+-...+.|.+.++
T Consensus       124 d~~~g~ly~~d~~~~~I~~~~~  145 (349)
T 3v64_C          124 DWVHDKLYWTDSGTSRIEVANL  145 (349)
T ss_dssp             ETTTTEEEEEETTTTEEEEEET
T ss_pred             ecCCCeEEEEcCCCCeEEEEcC
Confidence            8877788888888899999998

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=95.33  E-value=0.71  Score=36.17  Aligned_cols=98  Identities=7%  Similarity=-0.033  Sum_probs=62.3

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      ...|+..|+.+..............+++|++..  +..+.+-...+.|..+|+.+....... ...+...-. ....+++
T Consensus         9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~--~~ly~~D~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~-~p~glav   84 (316)
T 1ijq_A            9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS--NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLAV   84 (316)
T ss_dssp             BSSEEEEETTSCCCEEEECSCSSEEEEEEETTT--TEEEEEETTTTEEEEEEC--------C-EEEECSSCS-CCCEEEE
T ss_pred             CCeEEEEECCCcceEehhcCCCceEEEEEEeCC--CEEEEEECCCCcEEEEECCCCCCCccc-EEEEeCCCC-CcCEEEE
Confidence            367999999887665444444568899999853  234556667899999998762100000 001111112 3468888


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++.++++-...++|.+.++
T Consensus        85 d~~~~~ly~~d~~~~~I~~~~~  106 (316)
T 1ijq_A           85 DWIHSNIYWTDSVLGTVSVADT  106 (316)
T ss_dssp             ETTTTEEEEEETTTTEEEEEET
T ss_pred             eecCCeEEEEECCCCEEEEEeC
Confidence            8767778888888999999998

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=95.25  E-value=0.099  Score=45.47  Aligned_cols=25  Identities=16%  Similarity=0.062  Sum_probs=20.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN   26 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~   26 (174)
                      |+.++.+|.+.+.|.++|+++....
T Consensus       326 v~~~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          326 LTHPDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEECCCcEEEEEECCCCCEeeccc
Confidence            5668899999999999999876543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=94.82  E-value=0.1  Score=46.24  Aligned_cols=68  Identities=9%  Similarity=0.004  Sum_probs=41.0

Q ss_pred             CEEEEEec-CCCCCCCEEEEE-eCC----CcEEEEECCCc-ccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCC-
Q psy6415          30 GVCGVDFD-RRDIPMNKLVAT-TLE----AKLFVFDLKTL-HREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGS-  101 (174)
Q Consensus        30 ~V~sv~f~-~~~~~~~~l~s~-s~D----g~I~iWD~~~~-~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~D-  101 (174)
                      .+.+.+|| |++   +.||.+ +.+    .+|+++|+.++ +.+..    .+.   . ...+++|+|++..++.+ +.| 
T Consensus       175 ~~~~~~~S~PDG---~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~----~~~---~-~~~~~~WspDg~~l~y~-~~d~  242 (751)
T 2xe4_A          175 DVMEVKPAPPEH---DLVAFSVDMSGNEVYTIEFKRISDPSQTIAD----KVS---G-TNGEIVWGPDHTSLFYV-TKDE  242 (751)
T ss_dssp             EEEEEEECTTTT---CEEEEEEESSSSSCEEEEEEETTCTTCCCCC----CEE---E-ECSCCEECSSTTEEEEE-EECT
T ss_pred             EEeeeEecCCCC---CEEEEEEeCCCCceEEEEEEECCCCCEeCCc----ccc---C-ceeeEEEecCCCEEEEE-EECC
Confidence            46788999 974   777754 333    35999999986 52211    111   1 22367899966555444 444 


Q ss_pred             ----CcEEEEec
Q psy6415         102 ----GSLNLWQL  109 (174)
Q Consensus       102 ----g~V~lWd~  109 (174)
                          ..|.++++
T Consensus       243 ~~~~~~v~~~~l  254 (751)
T 2xe4_A          243 TLRENKVWRHVM  254 (751)
T ss_dssp             TCCEEEEEEEET
T ss_pred             CCCCCEEEEEEC
Confidence                25666776

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=94.81  E-value=0.04  Score=47.45  Aligned_cols=57  Identities=25%  Similarity=0.257  Sum_probs=41.4

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      .+|.|..||+++++.++.......+.+..+...   +..+..++.|+.|+.||.++++.+
T Consensus       442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~---gg~v~~g~~dg~l~a~D~~tG~~l  498 (571)
T 2ad6_A          442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTK---GGLVWYATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSCCCSBCEEET---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCCeEEEEECCCCCEEEEecCCCCccceeEEEC---CCEEEEEcCCCeEEEEECCCCCEE
Confidence            468999999999999887654433332222211   267888999999999999998754

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=94.66  E-value=0.045  Score=47.95  Aligned_cols=57  Identities=12%  Similarity=0.140  Sum_probs=41.7

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      .+|.|..||+++++.++.......+....+...   ++.+++++.|+.|+.||.++++.+
T Consensus       436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~---gg~vf~g~~dg~l~a~d~~tG~~l  492 (668)
T 1kv9_A          436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTA---GNLVFQGTAAGQMHAYSADKGEAL  492 (668)
T ss_dssp             CEEEEEEEETTTTEEEEEEEESSSCCCCEEEET---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccceEEEEeCCCCcEEEEccCCCCCcCceeEeC---CCEEEEECCcccchhhhhhcChhh
Confidence            458899999999999887654433322222222   378889999999999999987654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=94.34  E-value=1.9  Score=36.60  Aligned_cols=98  Identities=16%  Similarity=0.190  Sum_probs=59.5

Q ss_pred             CCcEEEEECCCCCeEEEeecC----CCEEEEEe-------cCCCCCCCEEEEEeCCC-------cEEEEECCC-cccccc
Q psy6415           8 NGDLKMFDLKTMSLKWETNLK----NGVCGVDF-------DRRDIPMNKLVATTLEA-------KLFVFDLKT-LHREKG   68 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~----~~V~sv~f-------~~~~~~~~~l~s~s~Dg-------~I~iWD~~~-~~~~~~   68 (174)
                      .+.|++.|++++.+.......    ...+.|+|       ++++   +.|..+...+       .|.+.+.+. +.....
T Consensus       161 ~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G---~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~  237 (496)
T 3kya_A          161 HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA---EYMIVAIDYDGKGDESPSVYIIKRNADGTFDDR  237 (496)
T ss_dssp             EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT---CEEEEEECCCTTGGGEEEEEEEECCTTSCCSTT
T ss_pred             CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC---CEEEEEeCCCCCcccCceEEEEecCCCCceeec
Confidence            367888898887765443221    24789999       9864   6565554443       266776333 111100


Q ss_pred             eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          69 FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        69 ~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      .....+....  ..+.++++|.++.++++-..++.|..+|++
T Consensus       238 ~~~~~v~~~~--~p~giavdp~~g~LYvtd~~~g~V~r~d~~  277 (496)
T 3kya_A          238 SDIQLIAAYK--QCNGATIHPINGELYFNSYEKGQVFRLDLV  277 (496)
T ss_dssp             SCEEEEEEES--CCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred             ccceeeccCC--CceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence            0001111111  235778999888899999999999999993

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=94.13  E-value=0.067  Score=46.22  Aligned_cols=55  Identities=18%  Similarity=0.185  Sum_probs=40.3

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEE--EEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCG--VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~s--v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      .+|.|..||+++++.++.......+.+  +...     +..++.++.|+.++.||.++++.+
T Consensus       464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta-----gglvf~g~~dg~l~A~D~~tG~~l  520 (582)
T 1flg_A          464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATA-----GNLVFTGTGDGYFKAFDAKSGKEL  520 (582)
T ss_dssp             CSEEEEEECTTTCCEEEEEEESSCCCSCCEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CcceEEEEECCCCCEEEEecCCCCCcccceEeC-----CCEEEEECCCCcEEEEECCCCCEE
Confidence            368999999999999877654322221  1111     367888999999999999998754

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=94.04  E-value=0.78  Score=37.91  Aligned_cols=92  Identities=13%  Similarity=0.172  Sum_probs=53.7

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC---Cc-EEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE---AK-LFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D---g~-I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +.|+.+|+.++............+.|+|++++   +.+++-...   .. +...+... .....   ..+ +.-. .-+.
T Consensus       162 ~~I~~id~~~g~v~~~~~~~~~P~giavd~dG---~lyVad~~~~~~~~gv~~~~~~~-~~~~~---~~~-~~~~-~P~g  232 (433)
T 4hw6_A          162 DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNG---DMVVVDDQSSDTNTGIYLFTRAS-GFTER---LSL-CNAR-GAKT  232 (433)
T ss_dssp             SCEEEEETTTTEEEEECCCCSCEEEEEECTTC---CEEEEECCSCTTSEEEEEECGGG-TTCCE---EEE-EECS-SBCC
T ss_pred             CCEEEEECCCCEEEEeecCCCCccEEEECCCC---CEEEEcCCCCcccceEEEEECCC-Ceecc---ccc-cccC-CCCE
Confidence            67888888777665443334558899999974   644444321   11 22233221 11000   011 1112 3457


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++++|.++.++++-..++.|+.+|.
T Consensus       233 iavd~~~G~lyv~d~~~~~V~~~d~  257 (433)
T 4hw6_A          233 CAVHPQNGKIYYTRYHHAMISSYDP  257 (433)
T ss_dssp             CEECTTTCCEEECBTTCSEEEEECT
T ss_pred             EEEeCCCCeEEEEECCCCEEEEEEC
Confidence            8899966778888788888988888

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.92  E-value=2.5  Score=35.50  Aligned_cols=98  Identities=12%  Similarity=0.188  Sum_probs=60.6

Q ss_pred             cCCcEEEEECCCCCeEEEeecC-----CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcc-ccc-----------ce
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLK-----NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLH-REK-----------GF   69 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~-----~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~-~~~-----------~~   69 (174)
                      .++.||.-++.....-......     ..|..+..||++   +.||.. .+.+|.|-.+.... ...           .|
T Consensus        39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG---~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty  114 (452)
T 3pbp_A           39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG---DLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHY  114 (452)
T ss_dssp             ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS---SEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEE
T ss_pred             ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC---CEEEEe-cCCeEEEEEecCccccCcccccccccceeEE
Confidence            4577887787633211111111     257778999974   666665 45689999987321 111           11


Q ss_pred             eeeeec-ccCcCcEEEEEEcCCCC--CEEEEEcCCCcEEEEec
Q psy6415          70 AYLSEK-AHKATTVWAAKHLPQNR--DLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~-~h~~~~i~~v~fsP~~~--~~las~s~Dg~V~lWd~  109 (174)
                      .+.... .... +|..|.|||.+.  ..|++=..|++|++||+
T Consensus       115 ~l~~~~~~~~s-~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl  156 (452)
T 3pbp_A          115 SIDEEEVGPKS-SIKKVLFHPKSYRDSCIVVLKEDDTITMFDI  156 (452)
T ss_dssp             EGGGCC--CCC-CEEEEEECTTBGGGCEEEEEETTSCEEEEET
T ss_pred             EcCCcccCCCC-ceeEEEeccccCCCCeEEEEecCCEEEEEEc
Confidence            111110 1245 799999999743  37788899999999999

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=93.36  E-value=2.6  Score=34.09  Aligned_cols=90  Identities=14%  Similarity=0.138  Sum_probs=47.1

Q ss_pred             cCCcEEEEECCC--CCeEE-Ee-e--c---CCCEEEEEecCCCCCCC--EEEEEeC--CCcEEEEECCCcccccceeeee
Q psy6415           7 DNGDLKMFDLKT--MSLKW-ET-N--L---KNGVCGVDFDRRDIPMN--KLVATTL--EAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         7 ~Dg~iklWDl~~--~~~~~-~~-~--~---~~~V~sv~f~~~~~~~~--~l~s~s~--Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      .+|.|.++|+++  .+... .. .  .   .-....+++.++. ++.  .+++-..  +.+|.||++........ .+.+
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~-dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~-~~~~  158 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDD-DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLL-HLKT  158 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECT-TCCEEEEEEECSTTCCEEEEEEEETTTTEEE-EEEE
T ss_pred             CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECC-CCcEEEEEEECCCCCCeEEEEEEECCCCEEE-EEec
Confidence            689999999974  33221 11 1  0   1235666665431 122  3344333  67899998876432111 1223


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEc
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCG   99 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s   99 (174)
                      +.+..-...+.+.+.|+ +.++++..
T Consensus       159 ~~g~~~~~pND~~v~~~-G~fyvt~~  183 (355)
T 3sre_A          159 IRHKLLPSVNDIVAVGP-EHFYATND  183 (355)
T ss_dssp             ECCTTCSSEEEEEEEET-TEEEEEES
T ss_pred             cccCCCCCCceEEEeCC-CCEEecCC
Confidence            33322225788989884 55666654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=93.29  E-value=0.99  Score=36.06  Aligned_cols=73  Identities=5%  Similarity=0.033  Sum_probs=44.5

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee-eeeecccCcCcEEEEEEcCC---CCCEEEEEcCC---
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA-YLSEKAHKATTVWAAKHLPQ---NRDLFVTCGGS---  101 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~-~~~~~~h~~~~i~~v~fsP~---~~~~las~s~D---  101 (174)
                      ..-..|+|.|++   . |..+..++.|++++ . .+. ..+. +........ ....|+|+|+   ++.++++-..+   
T Consensus        31 ~~P~~ia~~pdG---~-l~V~e~~g~I~~i~-~-g~~-~~~~~~~v~~~g~~-~p~gia~~pdf~~~g~lYv~~~~~~~~  102 (352)
T 2ism_A           31 EVPWALAFLPDG---G-MLIAERPGRIRLFR-E-GRL-STYAELSVYHRGES-GLLGLALHPRFPQEPYVYAYRTVAEGG  102 (352)
T ss_dssp             SCEEEEEECTTS---C-EEEEETTTEEEEEE-T-TEE-EEEEECCCCCSTTC-SEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred             CCceEEEEcCCC---e-EEEEeCCCeEEEEE-C-CCc-cEeecceEeecCCC-CceeEEECCCCCCCCEEEEEEecCCCC
Confidence            456789999974   5 55556779999998 3 221 1110 001111223 5789999996   56677766543   


Q ss_pred             --CcEEEEec
Q psy6415         102 --GSLNLWQL  109 (174)
Q Consensus       102 --g~V~lWd~  109 (174)
                        +.|..|+.
T Consensus       103 ~~~~v~r~~~  112 (352)
T 2ism_A          103 LRNQVVRLRH  112 (352)
T ss_dssp             SEEEEEEEEE
T ss_pred             CccEEEEEEe
Confidence              56777776

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=93.18  E-value=2.9  Score=33.96  Aligned_cols=73  Identities=16%  Similarity=0.079  Sum_probs=47.8

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-CCcEEEE
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG-SGSLNLW  107 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~-Dg~V~lW  107 (174)
                      .....|++++..  ++..++-...+.|.+.|+...... .    .+...-. ....|++.|.++.++.|-.. .+.|...
T Consensus       159 ~~p~glavD~~~--~~lY~~d~~~~~I~~~~~~g~~~~-~----l~~~~~~-~P~~iavdp~~g~ly~td~~~~~~I~~~  230 (400)
T 3p5b_L          159 QAPDGLAVDWIH--SNIYWTDSVLGTVSVADTKGVKRK-T----LFRENGS-KPRAIVVDPVHGFMYWTDWGTPAKIKKG  230 (400)
T ss_dssp             SCEEEEEEETTT--TEEEEEETTTTEEEEECTTTCSEE-E----EEECSSC-CEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred             CCcccEEEEecC--CceEEEECCCCeEEEEeCCCCceE-E----EEeCCCC-CcceEEEecccCeEEEEeCCCCCEEEEE
Confidence            346788888742  355566677889999998764321 0    1111222 46899999977777777644 4788888


Q ss_pred             ec
Q psy6415         108 QL  109 (174)
Q Consensus       108 d~  109 (174)
                      ++
T Consensus       231 ~~  232 (400)
T 3p5b_L          231 GL  232 (400)
T ss_dssp             ET
T ss_pred             eC
Confidence            87

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=93.17  E-value=2.1  Score=34.53  Aligned_cols=99  Identities=10%  Similarity=0.079  Sum_probs=58.3

Q ss_pred             EEEecCCcEEEEECCCCCeEEE-eec-----C--CCEEEEEe---cCCCCCCCEEEEEe-------------CCCcEEEE
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWE-TNL-----K--NGVCGVDF---DRRDIPMNKLVATT-------------LEAKLFVF   58 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~-~~~-----~--~~V~sv~f---~~~~~~~~~l~s~s-------------~Dg~I~iW   58 (174)
                      ++--..|+|..||..++..... ...     .  ..+..|.+   +|+   +..+++..             .++.|..+
T Consensus        29 vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~---grL~vv~~~~~af~~~g~~~~g~~~v~~~  105 (334)
T 2p9w_A           29 QSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS---KRLFAVMKNAKSFNFADQSSHGASSFHSF  105 (334)
T ss_dssp             EEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC---CEEEEEEEETTTTCTTSCCSSSCCEEEEE
T ss_pred             EEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC---CcEEEEEcccccccccccccCCCCEEEEE
Confidence            3444689999999986654332 111     0  12578999   674   24444332             26889999


Q ss_pred             ECC---Ccccccceeeeeeccc----------C-cCcEEEEEEcCCCCCEEEEEcCC-CcEEEEec
Q psy6415          59 DLK---TLHREKGFAYLSEKAH----------K-ATTVWAAKHLPQNRDLFVTCGGS-GSLNLWQL  109 (174)
Q Consensus        59 D~~---~~~~~~~~~~~~~~~h----------~-~~~i~~v~fsP~~~~~las~s~D-g~V~lWd~  109 (174)
                      |+.   +.+.+...   .+...          . . ..+.++.-| +++..++++.- +.|...+-
T Consensus       106 Dl~~~~tg~~~~~~---dL~~~~~~~~~~~g~~~~-~~nDvavD~-~GnaYVt~s~~~~~I~rV~p  166 (334)
T 2p9w_A          106 NLPLSENSKPVWSV---NFEKVQDEFEKKAGKRPF-GVVQSAQDR-DGNSYVAFALGMPAIARVSA  166 (334)
T ss_dssp             ESSCCTTCCCSEEE---ESHHHHHHHHHHHSSCCE-EEEEEEECT-TSCEEEEEEESSCEEEEECT
T ss_pred             cCCcCCCCCEEEEe---cCcccccccccccccccc-CCceeEECC-CCCEEEeCCCCCCeEEEEeC
Confidence            998   55432111   11111          1 2 478999999 56788888876 65444433

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=93.14  E-value=0.38  Score=42.57  Aligned_cols=95  Identities=9%  Similarity=0.085  Sum_probs=54.6

Q ss_pred             cEEEEECCCC-CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC-----CcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415          10 DLKMFDLKTM-SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE-----AKLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus        10 ~iklWDl~~~-~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-----g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      +|+++|+.++ +.+.. .......+++|+|++   +.|+..+.|     ..|.++++.+...... .+... .+.. ...
T Consensus       202 ~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg---~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~-lv~~~-~~~~-~~~  274 (751)
T 2xe4_A          202 TIEFKRISDPSQTIAD-KVSGTNGEIVWGPDH---TSLFYVTKDETLRENKVWRHVMGKLQSEDV-CLYEE-HNPL-FSA  274 (751)
T ss_dssp             EEEEEETTCTTCCCCC-CEEEECSCCEECSST---TEEEEEEECTTCCEEEEEEEETTSCGGGCE-EEEEC-CCTT-CEE
T ss_pred             EEEEEECCCCCEeCCc-cccCceeeEEEecCC---CEEEEEEECCCCCCCEEEEEECCCCchhcE-EEEec-CCCc-eEE
Confidence            5999999988 63211 001113467899974   677766655     3688888876532211 11111 2223 456


Q ss_pred             EEEEcCCCCCEEEEEcC--CCcEEEEeccc
Q psy6415          84 AAKHLPQNRDLFVTCGG--SGSLNLWQLVS  111 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~--Dg~V~lWd~~~  111 (174)
                      ++.|||++..++.+...  ...|.++|+++
T Consensus       275 ~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~  304 (751)
T 2xe4_A          275 FMYKAADTNTLCIGSQSPETAEVHLLDLRK  304 (751)
T ss_dssp             EEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred             EEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence            88999966545444432  34677778743

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=92.88  E-value=2.8  Score=32.98  Aligned_cols=72  Identities=11%  Similarity=-0.064  Sum_probs=45.7

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEc-CCCcEEEEe
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCG-GSGSLNLWQ  108 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s-~Dg~V~lWd  108 (174)
                      ....+++++.+  ++.+++-...+.|.++|+...... .  +  ....-. .-+.+++.|.++.++.+-. ..+.|...+
T Consensus        80 ~p~glavd~~~--g~ly~~d~~~~~I~~~~~dG~~~~-~--l--~~~~~~-~P~giavdp~~g~ly~td~~~~~~I~r~~  151 (318)
T 3sov_A           80 SPDGLACDWLG--EKLYWTDSETNRIEVSNLDGSLRK-V--L--FWQELD-QPRAIALDPSSGFMYWTDWGEVPKIERAG  151 (318)
T ss_dssp             CCCEEEEETTT--TEEEEEETTTTEEEEEETTSCSCE-E--E--ECSSCS-SEEEEEEEGGGTEEEEEECSSSCEEEEEE
T ss_pred             CccEEEEEcCC--CeEEEEECCCCEEEEEECCCCcEE-E--E--EeCCCC-CccEEEEeCCCCEEEEEecCCCCEEEEEE
Confidence            34567887643  355566677889999998764211 0  1  112222 4689999997777777663 357788777


Q ss_pred             c
Q psy6415         109 L  109 (174)
Q Consensus       109 ~  109 (174)
                      +
T Consensus       152 ~  152 (318)
T 3sov_A          152 M  152 (318)
T ss_dssp             T
T ss_pred             c
Confidence            7

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=92.77  E-value=3.2  Score=37.24  Aligned_cols=72  Identities=17%  Similarity=0.091  Sum_probs=47.8

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCC-CcEEEEe
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGS-GSLNLWQ  108 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~D-g~V~lWd  108 (174)
                      ....|++++.+  ++++++-+..+.|.+.|+...... .  +  +...-. ....|++.|..+.++.|-..+ +.|...+
T Consensus       472 ~P~GLAvD~~~--~~LY~tD~~~~~I~v~~ldG~~~~-~--l--~~~~l~-~P~gIaVDp~~g~LYwtD~g~~~~I~~~~  543 (791)
T 3m0c_C          472 APDGLAVDWIH--SNIYWTDSVLGTVSVADTKGVKRK-T--L--FRENGS-KPRAIVVDPVHGFMYWTDWGTPAKIKKGG  543 (791)
T ss_dssp             CCCEEEEETTT--TEEEEEETTTTEEEEEETTSSSEE-E--E--EECTTC-CEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred             CcceeeeeecC--CcEEEEecCCCeEEEEeCCCCeEE-E--E--EeCCCC-CcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence            45678888753  355667778889999999864311 1  1  111223 568999999777788776444 7888888


Q ss_pred             c
Q psy6415         109 L  109 (174)
Q Consensus       109 ~  109 (174)
                      +
T Consensus       544 ~  544 (791)
T 3m0c_C          544 L  544 (791)
T ss_dssp             T
T ss_pred             c
Confidence            7

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=92.60  E-value=0.96  Score=36.52  Aligned_cols=97  Identities=20%  Similarity=0.299  Sum_probs=61.9

Q ss_pred             CCcEEEEECC---CCCeEEEeecC--------------CCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECCCcccccce
Q psy6415           8 NGDLKMFDLK---TMSLKWETNLK--------------NGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLKTLHREKGF   69 (174)
Q Consensus         8 Dg~iklWDl~---~~~~~~~~~~~--------------~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~~~~~~~~~   69 (174)
                      +..|..+|+.   +++..+.....              ...+.++.++++   +..++++.- +.|...|...... ..+
T Consensus        99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G---naYVt~s~~~~~I~rV~pdG~~~-~~~  174 (334)
T 2p9w_A           99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG---NSYVAFALGMPAIARVSADGKTV-STF  174 (334)
T ss_dssp             CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS---CEEEEEEESSCEEEEECTTSCCE-EEE
T ss_pred             CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC---CEEEeCCCCCCeEEEEeCCCCEE-eee
Confidence            6779999999   78776554321              248899999974   889988877 7777766654321 111


Q ss_pred             eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          70 AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        70 ~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .............+.++++|++ .+|+.....|.+.-+|+
T Consensus       175 ~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~  213 (334)
T 2p9w_A          175 AWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDV  213 (334)
T ss_dssp             EECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEEC
T ss_pred             eecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcC
Confidence            0000001111136789999965 45555555999999998

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=92.52  E-value=1  Score=36.17  Aligned_cols=73  Identities=10%  Similarity=0.004  Sum_probs=44.4

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee-eeecccCcCcEEEEEEcCC---CCCEEEEEcC---C
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY-LSEKAHKATTVWAAKHLPQ---NRDLFVTCGG---S  101 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~-~~~~~h~~~~i~~v~fsP~---~~~~las~s~---D  101 (174)
                      ..-..|+|.|++    .|..+..++.|+++|... .  ..+.. ........ ....|+|+|+   ++.++++-+.   +
T Consensus        29 ~~P~~ia~~pdG----~l~V~e~~g~I~~~d~~G-~--~~~~~~~v~~~g~~-g~~gia~~pdf~~~g~lyv~~~~~~~~  100 (354)
T 3a9g_A           29 EVPWSIAPLGGG----RYLVTERPGRLVLISPSG-K--KLVASFDVANVGEA-GLLGLALHPEFPKKSWVYLYASYFAEG  100 (354)
T ss_dssp             SCEEEEEEEETT----EEEEEETTTEEEEECSSC-E--EEEEECCCCCSTTC-SEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred             CCCeEEEEcCCC----eEEEEeCCCEEEEEeCCC-c--eEeeccceeecCCC-ceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence            456789999963    466667779999998432 2  11110 00111223 5789999996   5667776543   3


Q ss_pred             ----CcEEEEec
Q psy6415         102 ----GSLNLWQL  109 (174)
Q Consensus       102 ----g~V~lWd~  109 (174)
                          ..|..|+.
T Consensus       101 ~~~~~~v~r~~~  112 (354)
T 3a9g_A          101 GHIRNRVIRGRL  112 (354)
T ss_dssp             GCEEEEEEEEEE
T ss_pred             CCcceEEEEEEE
Confidence                55666666

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=92.46  E-value=3.7  Score=33.32  Aligned_cols=99  Identities=7%  Similarity=-0.026  Sum_probs=63.1

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      ....|+..|+.+............+..|+|++..  +..+.+-...+.|+.+++......... .......-. ....++
T Consensus        90 ~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~--~~lywsD~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~-~p~gla  165 (400)
T 3p5b_L           90 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS--NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLA  165 (400)
T ss_dssp             ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTT--TEEEEEETTTTEEEEEEC------CCC-EEEECSSCS-CEEEEE
T ss_pred             ccceeEEEccCCcceeEeccccCcceEEeeeecc--CceEEEecCCCeEEEEEcccCCCCCcc-eEEEeCCCC-CcccEE
Confidence            3477888888877655444445678899999853  234455567789999998752200000 011111222 567889


Q ss_pred             EcCCCCCEEEEEcCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+.++.++.+-...+.|.+.++
T Consensus       166 vD~~~~~lY~~d~~~~~I~~~~~  188 (400)
T 3p5b_L          166 VDWIHSNIYWTDSVLGTVSVADT  188 (400)
T ss_dssp             EETTTTEEEEEETTTTEEEEECT
T ss_pred             EEecCCceEEEECCCCeEEEEeC
Confidence            98877788888888999999888

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=92.26  E-value=0.2  Score=43.46  Aligned_cols=55  Identities=24%  Similarity=0.210  Sum_probs=40.2

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEE-E-EEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVC-G-VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~-s-v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      .+|.|..||+++++.++.......+. + ++..     +..+..++.|+.++.||.++++.+
T Consensus       451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~ta-----gg~vf~gt~dg~l~A~D~~tG~~l  507 (599)
T 1w6s_A          451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATA-----GDLVFYGTLDGYLKARDSDTGDLL  507 (599)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSCCCSBCEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CcCeEEEEECCCCCEEeEecCCCCccCcceEec-----CCEEEEECCCCeEEEEECCCCCEE
Confidence            45899999999999988765332221 1 2211     367888999999999999998754

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=92.13  E-value=5  Score=35.96  Aligned_cols=98  Identities=7%  Similarity=-0.033  Sum_probs=60.6

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      ...|+..++..............+..|+|++..  +.++++-...+.|+.+++......... ...+...-. ....|++
T Consensus       403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~--~~lY~sD~~~~~I~~~~l~g~~~~~~~-~~vi~~~l~-~P~GLAv  478 (791)
T 3m0c_C          403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS--NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLAV  478 (791)
T ss_dssp             BSSEEEECTTSCCCEEEECSCSSEEEEEEETTT--TEEEEEETTTTEEEEEEC--------C-EEEECSSCS-CCCEEEE
T ss_pred             ccceeEeeccCCcceeeecCCCceEEEeecccC--CeeEEeeccceeEEEEeccCCCCCcce-eEEEecCCC-Ccceeee
Confidence            356777777665544444344567899999853  244556667788999998753210000 011111122 4567889


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++.++++-...++|.+.++
T Consensus       479 D~~~~~LY~tD~~~~~I~v~~l  500 (791)
T 3m0c_C          479 DWIHSNIYWTDSVLGTVSVADT  500 (791)
T ss_dssp             ETTTTEEEEEETTTTEEEEEET
T ss_pred             eecCCcEEEEecCCCeEEEEeC
Confidence            8877789999999999999998

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=92.10  E-value=1.2  Score=38.53  Aligned_cols=93  Identities=14%  Similarity=0.029  Sum_probs=54.3

Q ss_pred             cEEEEECCCCCeEE--Eee--cCCCEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415          10 DLKMFDLKTMSLKW--ETN--LKNGVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus        10 ~iklWDl~~~~~~~--~~~--~~~~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      .+.+||+.+++...  ...  ...-..++++.++   +..++.|+ .+..+.+||..+.+-...   ..+.. .. .-.+
T Consensus       220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~---g~lyv~GG~~~~~v~~yd~~t~~W~~~---~~~~~-~R-~~~s  291 (656)
T 1k3i_A          220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN---GQIVVTGGNDAKKTSLYDSSSDSWIPG---PDMQV-AR-GYQS  291 (656)
T ss_dssp             EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT---SCEEEECSSSTTCEEEEEGGGTEEEEC---CCCSS-CC-SSCE
T ss_pred             EEEEEeCCCCcEEeCcccCCCCCCccccccCCCC---CCEEEeCCCCCCceEEecCcCCceeEC---CCCCc-cc-cccc
Confidence            58899998876322  111  1122334566554   37788887 456899999987542211   01111 11 1124


Q ss_pred             EEEcCCCCCEEEEEc-CC-----CcEEEEeccc
Q psy6415          85 AKHLPQNRDLFVTCG-GS-----GSLNLWQLVS  111 (174)
Q Consensus        85 v~fsP~~~~~las~s-~D-----g~V~lWd~~~  111 (174)
                      +...| ++.+++.|| .+     ..+.+||.++
T Consensus       292 ~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t  323 (656)
T 1k3i_A          292 SATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSS  323 (656)
T ss_dssp             EEECT-TSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred             eEEec-CCeEEEEeCcccCCcccccceEeCCCC
Confidence            45666 567889888 45     5799999854

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=92.10  E-value=1.2  Score=35.62  Aligned_cols=67  Identities=9%  Similarity=0.074  Sum_probs=39.7

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccc--ccceeeeeecccCcCcEEEEEEcCC---CCCEEEEEcC
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHR--EKGFAYLSEKAHKATTVWAAKHLPQ---NRDLFVTCGG  100 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~--~~~~~~~~~~~h~~~~i~~v~fsP~---~~~~las~s~  100 (174)
                      ..-..|+|.|++   +.|..+...|.|+++|......  ..... ........ ....++|+|+   ++.++++-+.
T Consensus        18 ~~P~~i~~~pdG---~~l~V~e~~G~i~~~~~~g~~~~~~~~~~-~v~~~g~~-g~~gia~~pdf~~~g~lYv~~~~   89 (353)
T 2g8s_A           18 DHPWALAFLPDN---HGMLITLRGGELRHWQAGKGLSAPLSGVP-DVWAHGQG-GLLDVVLAPDFAQSRRIWLSYSE   89 (353)
T ss_dssp             SSEEEEEECSTT---CCEEEEETTTEEEEEETTTEECCCCBSCC-CCCCSTTC-SEEEEEECTTHHHHCEEEEEEEE
T ss_pred             CCcEEEEEcCCC---CEEEEEeCCceEEEEeCCCceeeEecCCc-ccccCCCC-CceeEEECCCCCCCCEEEEEEeC
Confidence            446789999974   5255666789999998543211  11000 00111233 5789999996   5667776443

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=92.09  E-value=1  Score=37.79  Aligned_cols=77  Identities=10%  Similarity=0.085  Sum_probs=50.6

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc-e----eeeeecccCcCcEEEEEEcCCCCCEEEE--EcC
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG-F----AYLSEKAHKATTVWAAKHLPQNRDLFVT--CGG  100 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~-~----~~~~~~~h~~~~i~~v~fsP~~~~~las--~s~  100 (174)
                      ...|..+-|||-+..+..|++-..|++||+||+........ +    ....+..+.. .|.+++|.+ ++-.|-.  .+.
T Consensus       124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~-ev~S~~Fg~-~~lTLYvl~~t~  201 (452)
T 3pbp_A          124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVN-DITDLEFSK-DGLTLYCLNTTE  201 (452)
T ss_dssp             CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCC-CEEEEEECT-TSSCEEEEECTT
T ss_pred             CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccc-eEEEEEEcC-CCcEEEEEecCC
Confidence            46699999999876667899999999999999986221100 0    0001112224 788999998 4443333  457


Q ss_pred             CCcEEE
Q psy6415         101 SGSLNL  106 (174)
Q Consensus       101 Dg~V~l  106 (174)
                      .|.|+-
T Consensus       202 ~GDIYA  207 (452)
T 3pbp_A          202 GGDIFA  207 (452)
T ss_dssp             SCEEEE
T ss_pred             CCCEEE
Confidence            777754

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=90.70  E-value=3  Score=33.64  Aligned_cols=76  Identities=13%  Similarity=0.090  Sum_probs=44.4

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee-e-eeecccCcCcEEEEEEcCC---CCCEEEEE--cCC
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA-Y-LSEKAHKATTVWAAKHLPQ---NRDLFVTC--GGS  101 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~-~-~~~~~h~~~~i~~v~fsP~---~~~~las~--s~D  101 (174)
                      ..-..|+|.|++   ..+++--..|.|++++..+.... .+. + ........ ....|+|+|+   ++.++++=  ..+
T Consensus        32 ~~P~~ia~~pdG---~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~-GllGia~~Pdf~~~g~lYv~yt~~~~  106 (347)
T 3das_A           32 NSPWGLAPLPGG---DLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEG-GLLGIALSPDYASDHMVYAYFTSASD  106 (347)
T ss_dssp             SSEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTB-SEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred             CCceEEEEcCCC---cEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCC-CceeeEeccccccCCEEEEEEecCCC
Confidence            456899999974   55555444899999986543321 010 0 01112234 6889999995   46566642  244


Q ss_pred             CcEEEEec
Q psy6415         102 GSLNLWQL  109 (174)
Q Consensus       102 g~V~lWd~  109 (174)
                      +.|.-|.+
T Consensus       107 ~~v~R~~~  114 (347)
T 3das_A          107 NRIVRMLY  114 (347)
T ss_dssp             EEEEEEEB
T ss_pred             CEEEEEEe
Confidence            55555555

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=90.40  E-value=1.2  Score=40.71  Aligned_cols=36  Identities=31%  Similarity=0.277  Sum_probs=27.7

Q ss_pred             CEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc
Q psy6415          30 GVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG   68 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~   68 (174)
                      .+.+++..++   ...++|-+.|+++|||++.+++++..
T Consensus       237 ~~~~~~~~~~---~~~lftl~~D~~LRiWsl~t~~~v~t  272 (950)
T 4gq2_M          237 TIISMIFLST---YNVLVMLSLDYKLKVLDLSTNQCVET  272 (950)
T ss_dssp             CEEEEEEETT---TTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred             eEEEEeecCC---CcEEEEEECCCEEEEEECCCCCeEee
Confidence            4566666654   36788999999999999999876543

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=90.04  E-value=4  Score=31.32  Aligned_cols=70  Identities=7%  Similarity=-0.030  Sum_probs=44.5

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCC--cEE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSG--SLN  105 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg--~V~  105 (174)
                      ......++|++++   +.+++-..++.|..||..... .   .  .. .-.. ....+++.|++ .++++.....  .|.
T Consensus        31 ~~~pegia~~~~g---~lyv~d~~~~~I~~~d~~g~~-~---~--~~-~~~~-~p~gia~~~dG-~l~vad~~~~~~~v~   98 (306)
T 2p4o_A           31 NTFLENLASAPDG---TIFVTNHEVGEIVSITPDGNQ-Q---I--HA-TVEG-KVSGLAFTSNG-DLVATGWNADSIPVV   98 (306)
T ss_dssp             TCCEEEEEECTTS---CEEEEETTTTEEEEECTTCCE-E---E--EE-ECSS-EEEEEEECTTS-CEEEEEECTTSCEEE
T ss_pred             CCCcceEEECCCC---CEEEEeCCCCeEEEECCCCce-E---E--EE-eCCC-CceeEEEcCCC-cEEEEeccCCcceEE
Confidence            3557889999863   666776788999999987631 1   1  11 1123 67889999954 5666554332  355


Q ss_pred             EEec
Q psy6415         106 LWQL  109 (174)
Q Consensus       106 lWd~  109 (174)
                      .+|.
T Consensus        99 ~~d~  102 (306)
T 2p4o_A           99 SLVK  102 (306)
T ss_dssp             EEEC
T ss_pred             EEcC
Confidence            5554

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=90.02  E-value=2.6  Score=35.10  Aligned_cols=63  Identities=6%  Similarity=0.083  Sum_probs=38.1

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECCCcccccceeeeeec------ccCcCcEEEEEEcCC---CCCEEEEE
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLKTLHREKGFAYLSEK------AHKATTVWAAKHLPQ---NRDLFVTC   98 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~~~~~~~~~~~~~~~------~h~~~~i~~v~fsP~---~~~~las~   98 (174)
                      ..-.+|+|.|++   ..+++ ... +.|++++..+.... .  +..+.      ..+. .+..|+|+|+   ++.++++-
T Consensus        27 ~~P~~~a~~pdG---~l~V~-e~~gg~I~~~~~~~g~~~-~--~~~~~~~~~~~~g~~-Gllgia~~Pdf~~~g~lYv~~   98 (454)
T 1cru_A           27 NKPHALLWGPDN---QIWLT-ERATGKILRVNPESGSVK-T--VFQVPEIVNDADGQN-GLLGFAFHPDFKNNPYIYISG   98 (454)
T ss_dssp             SSEEEEEECTTS---CEEEE-ETTTCEEEEECTTTCCEE-E--EEECTTCCCCTTSSC-SEEEEEECTTTTTSCEEEEEE
T ss_pred             CCceEEEEcCCC---cEEEE-EcCCCEEEEEECCCCcEe-E--EecCCccccccCCCC-ceeEEEECCCcCcCCEEEEEE
Confidence            456799999974   55554 455 47888876543211 1  11111      1234 6889999996   66666665


Q ss_pred             c
Q psy6415          99 G   99 (174)
Q Consensus        99 s   99 (174)
                      +
T Consensus        99 s   99 (454)
T 1cru_A           99 T   99 (454)
T ss_dssp             E
T ss_pred             e
Confidence            4

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=89.97  E-value=9.5  Score=33.46  Aligned_cols=100  Identities=17%  Similarity=0.162  Sum_probs=62.7

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee---------cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN---------LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL   72 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~---------~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~   72 (174)
                      |-.|..++-|..||.+++.......         ....|.++..+++   ++.|-.|+.++-|.+||.++.+..+ +...
T Consensus       370 lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~---g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~  445 (795)
T 4a2l_A          370 LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK---KSLVYIGTHAGGLSILHRNSGQVEN-FNQR  445 (795)
T ss_dssp             EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT---TTEEEEEETTTEEEEEETTTCCEEE-ECTT
T ss_pred             EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC---CCEEEEEeCcCceeEEeCCCCcEEE-eecC
Confidence            3456777788999988876543321         1356899988775   2437778888889999988754211 1000


Q ss_pred             eecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          73 SEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 ~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...-... .|+++...++ +.+.+.+. + -|.+||.
T Consensus       446 ~~~l~~~-~v~~i~~d~~-g~lwigt~-~-Gl~~~~~  478 (795)
T 4a2l_A          446 NSQLVNE-NVYAILPDGE-GNLWLGTL-S-ALVRFNP  478 (795)
T ss_dssp             TSCCSCS-CEEEEEECSS-SCEEEEES-S-CEEEEET
T ss_pred             CCCcCCC-eeEEEEECCC-CCEEEEec-C-ceeEEeC
Confidence            0001234 7999988884 45555443 4 4888887

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=89.79  E-value=0.6  Score=41.12  Aligned_cols=96  Identities=8%  Similarity=0.016  Sum_probs=55.6

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEE-EEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEE
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLV-ATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKH   87 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~-s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~f   87 (174)
                      +.|+..|+.+............+..|+|++..   +.|. +-...+.|+.+|+.+....... ...+...-. ....|++
T Consensus       386 ~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~---~~Ly~sD~~~~~I~~~~~~g~~~~~~~-~~~i~~~~~-~P~glav  460 (699)
T 1n7d_A          386 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVAS---NRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQ-APDGLAV  460 (699)
T ss_dssp             TC-CEECTTSCCEECCSCCCTTCCCCEEETTT---TEEEECCTTTTSBEEEESCCCCC-CCC-CCBCCSCC---CCCEEC
T ss_pred             cceEEEeCCCCcceeeeccCcceEEEcccccc---CeEEEEecCCCeEEEEecCCCCCCcce-EEEEeCCCC-CcceEEE
Confidence            56777777766544333223456678998753   4554 4456789999998751100000 000111111 2346788


Q ss_pred             cCCCCCEEEEEcCCCcEEEEec
Q psy6415          88 LPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        88 sP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+.++.++++-...++|.+.++
T Consensus       461 D~~~g~LY~tD~~~~~I~v~d~  482 (699)
T 1n7d_A          461 DWIHSNIYWTDSVLGTVSVADT  482 (699)
T ss_dssp             CCSSSBCEECCTTTSCEEEEBS
T ss_pred             EeeCCcEEEEeccCCeEEEEec
Confidence            8667778888778899999988

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=89.49  E-value=9.8  Score=32.96  Aligned_cols=94  Identities=16%  Similarity=0.071  Sum_probs=54.2

Q ss_pred             CCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415           8 NGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      ++.|..+++.+......... ......|++++.+  ++..++-...+.|.+.|+......  . +  ....-. .-+.|+
T Consensus        58 ~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~--~~LY~tD~~~~~I~v~~~dG~~~~--~-l--~~~~l~-~P~~ia  129 (628)
T 4a0p_A           58 LKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG--KNLYWADTGTNRIEVSKLDGQHRQ--V-L--VWKDLD-SPRALA  129 (628)
T ss_dssp             TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT--TEEEEEETTTTEEEEEETTSTTCE--E-E--ECSSCC-CEEEEE
T ss_pred             CCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCC--CEEEEEECCCCEEEEEecCCCcEE--E-E--EeCCCC-CcccEE
Confidence            45555555544332222211 1345677887643  355566677889999998764311  1 1  111112 458999


Q ss_pred             EcCCCCCEEEEE-cCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTC-GGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~-s~Dg~V~lWd~  109 (174)
                      +.|..+.++.|- +..+.|...++
T Consensus       130 vdp~~G~lY~tD~g~~~~I~r~~~  153 (628)
T 4a0p_A          130 LDPAEGFMYWTEWGGKPKIDRAAM  153 (628)
T ss_dssp             EETTTTEEEEEECSSSCEEEEEET
T ss_pred             EccCCCeEEEeCCCCCCEEEEEeC
Confidence            999777777775 33567777776

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=89.23  E-value=6.6  Score=30.62  Aligned_cols=67  Identities=12%  Similarity=0.170  Sum_probs=39.3

Q ss_pred             CCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec--ccCcCcEEEEEEcCCCCCEEEEEcCCCcE
Q psy6415          28 KNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK--AHKATTVWAAKHLPQNRDLFVTCGGSGSL  104 (174)
Q Consensus        28 ~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~--~h~~~~i~~v~fsP~~~~~las~s~Dg~V  104 (174)
                      ...+..++++++    ..+..++.+|.+++.+......   .......  .+.. .+.+++|.| ++.++|.+ .+|.|
T Consensus       204 ~~~~~~~~~~~~----g~~~~~~~~G~~~~s~~D~G~t---W~~~~~~~~~~~~-~~~~v~~~~-~~~~~~~g-~~g~i  272 (327)
T 2xbg_A          204 SRRLHNMGFTPD----GRLWMIVNGGKIAFSDPDNSEN---WGELLSPLRRNSV-GFLDLAYRT-PNEVWLAG-GAGAL  272 (327)
T ss_dssp             SSCEEEEEECTT----SCEEEEETTTEEEEEETTEEEE---ECCCBCTTSSCCS-CEEEEEESS-SSCEEEEE-STTCE
T ss_pred             CCccceeEECCC----CCEEEEeCCceEEEecCCCCCe---eEeccCCcccCCc-ceEEEEecC-CCEEEEEe-CCCeE
Confidence            456888999875    3455667788888874221110   1000000  1223 589999998 45676654 47777

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=89.11  E-value=5.6  Score=32.28  Aligned_cols=103  Identities=12%  Similarity=0.152  Sum_probs=57.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCC-CCCE--EEEE-eC---CCcEEEEECC--Ccccccceeee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDI-PMNK--LVAT-TL---EAKLFVFDLK--TLHREKGFAYL   72 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~-~~~~--l~s~-s~---Dg~I~iWD~~--~~~~~~~~~~~   72 (174)
                      +++-...+-+.++|+ +|+.+..... ..++.|+.=|.-. .+..  |+.+ ..   +++|++|++.  +.+ +....-.
T Consensus        43 ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~  119 (355)
T 3amr_A           43 LITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP  119 (355)
T ss_dssp             EEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred             EEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence            344455678999999 6666655533 4566666544100 0111  4333 33   5899999774  322 1111000


Q ss_pred             --eecccC-cCcEEEEEE--cCCCCC-EEEEEcCCCcEEEEec
Q psy6415          73 --SEKAHK-ATTVWAAKH--LPQNRD-LFVTCGGSGSLNLWQL  109 (174)
Q Consensus        73 --~~~~h~-~~~i~~v~f--sP~~~~-~las~s~Dg~V~lWd~  109 (174)
                        .. ... . .++.+++  +|..+. ++.....+|.+..|++
T Consensus       120 ~~pv-~t~~~-~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l  160 (355)
T 3amr_A          120 DHPI-ATAIN-EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYEL  160 (355)
T ss_dssp             TSCE-ECCCS-SCCCEEEEECTTTCCEEEEEECSSSEEEEEEE
T ss_pred             ccCc-CCCCC-CeeEEEEEecCCCCcEEEEEECCCCeEEEEEE
Confidence              00 011 3 5677777  775553 3455677899999999

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=88.94  E-value=6.4  Score=30.11  Aligned_cols=97  Identities=10%  Similarity=0.107  Sum_probs=54.3

Q ss_pred             EEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC-C-cEEEEECCCcccccceeeeeecccCcCc
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE-A-KLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-g-~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +-..++.|..||..+. .............|++++++   +.+++.... + .|..+|..+.+...   +..+ .... .
T Consensus        48 ~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG---~l~vad~~~~~~~v~~~d~~~g~~~~---~~~~-~~~~-~  118 (306)
T 2p4o_A           48 TNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNG---DLVATGWNADSIPVVSLVKSDGTVET---LLTL-PDAI-F  118 (306)
T ss_dssp             EETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTS---CEEEEEECTTSCEEEEEECTTSCEEE---EEEC-TTCS-C
T ss_pred             EeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCC---cEEEEeccCCcceEEEEcCCCCeEEE---EEeC-CCcc-c
Confidence            3345677777777653 22223334568899999874   655554433 2 46666766644211   1111 1112 3


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      ...++..+ ++.++++-..+|.|..+|..
T Consensus       119 ~~g~~~~~-~~~~~v~d~~~g~i~~~d~~  146 (306)
T 2p4o_A          119 LNGITPLS-DTQYLTADSYRGAIWLIDVV  146 (306)
T ss_dssp             EEEEEESS-SSEEEEEETTTTEEEEEETT
T ss_pred             cCcccccC-CCcEEEEECCCCeEEEEeCC
Confidence            34555555 45567777778888888873

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=87.97  E-value=8.6  Score=32.10  Aligned_cols=67  Identities=10%  Similarity=0.105  Sum_probs=38.9

Q ss_pred             CCEEEEEecCCCCCCC-EEEEEeCCCcEEEEECCCccccccee-ee-eec-----ccCcCcEEEEEEcCC---CCCEEEE
Q psy6415          29 NGVCGVDFDRRDIPMN-KLVATTLEAKLFVFDLKTLHREKGFA-YL-SEK-----AHKATTVWAAKHLPQ---NRDLFVT   97 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~-~l~s~s~Dg~I~iWD~~~~~~~~~~~-~~-~~~-----~h~~~~i~~v~fsP~---~~~~las   97 (174)
                      ..-.+|+|.|++   . .|+.+...|.|++++.........+. +. ...     ..+. .+..|+|+|+   ++.++++
T Consensus        14 ~~P~~~a~~pdG---~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~-Gllgia~~P~f~~n~~lYv~   89 (463)
T 2wg3_C           14 RQPVGALHSGDG---SQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDER-GLLSLAFHPNYKKNGKLYVS   89 (463)
T ss_dssp             SSEEEEECCSSS---SCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCC-SEEEEEECTTHHHHCEEEEE
T ss_pred             CCceEEEECCCC---CeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCC-cceeeEeCCCCcCCCEEEEE
Confidence            345789999974   3 57777889999999754321000111 00 010     1134 6889999995   3455555


Q ss_pred             Ec
Q psy6415          98 CG   99 (174)
Q Consensus        98 ~s   99 (174)
                      -+
T Consensus        90 yt   91 (463)
T 2wg3_C           90 YT   91 (463)
T ss_dssp             EE
T ss_pred             Ee
Confidence            43

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=87.88  E-value=1.5  Score=38.58  Aligned_cols=97  Identities=10%  Similarity=-0.139  Sum_probs=58.6

Q ss_pred             ecCCcEEEEECCCCCeEEEeec-CCCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415           6 YDNGDLKMFDLKTMSLKWETNL-KNGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~~-~~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      ...+.|.+.|+.+......... ......|+++|.+  +.++++-... +.|...++...... .+ .   ...-. .-+
T Consensus       472 ~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~--g~ly~td~~~~~~I~~~~~dG~~~~-~l-~---~~~l~-~Pn  543 (699)
T 1n7d_A          472 SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVH--GFMYWTDWGTPAKIKKGGLNGVDIY-SL-V---TENIQ-WPN  543 (699)
T ss_dssp             TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSS--SCCEECCCSSSCCEEBCCSSSCCCC-EE-S---CSSCS-SCC
T ss_pred             ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCC--CcEEEcccCCCCeEEEEeCCCCCee-EE-E---eCCCC-Ccc
Confidence            3456777777765544332221 2345678888853  3444443333 78888887653211 00 0   01111 346


Q ss_pred             EEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          84 AAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      .|+|+|.++.++++-+..++|..++++
T Consensus       544 Glavd~~~~~LY~aD~~~~~I~~~d~d  570 (699)
T 1n7d_A          544 GITLDLLSGRLYWVDSKLHSISSIDVN  570 (699)
T ss_dssp             CEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred             EEEEeccCCEEEEEecCCCeEEEEccC
Confidence            799999888898988889999999984

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=86.89  E-value=5.2  Score=32.80  Aligned_cols=73  Identities=7%  Similarity=0.068  Sum_probs=48.9

Q ss_pred             EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      ...++++|++  +..+++-..++.|..+|..+....   .+..... .. .-+.++|+|++..++++-...++|..++.+
T Consensus       228 p~giavdp~~--g~lyv~d~~~~~V~~~~~~~~~~~---~~~~~~~-~~-~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          228 CNGAETHPIN--GELYFNSWNAGQVFRYDFTTQETT---PLFTIQD-SG-WEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             CCCEEECTTT--CCEEEEETTTTEEEEEETTTTEEE---EEEECSS-SS-CCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             ceEEEEeCCC--CEEEEEECCCCEEEEEECCCCcEE---EEEEcCC-CC-cceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            4567888842  366667667889999998864321   1111111 12 357899999654488888889999998873

>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*

Probab=86.63  E-value=15  Score=31.81  Aligned_cols=26  Identities=12%  Similarity=0.078  Sum_probs=19.5

Q ss_pred             cceeeee-eccccceeeeeeCCCCCCC
Q psy6415         149 LTLLQEA-TLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       149 ~~ll~~~-~~h~~~V~~l~~spd~~~~  174 (174)
                      +++|.+. -+|-..+.--+|.|+.+||
T Consensus       352 G~~L~st~~gHGDa~hv~dldP~r~Gl  378 (591)
T 2zux_A          352 GKGMYSTGLGHGDALHTGDLDPGRPGL  378 (591)
T ss_dssp             SCEEEECSCCCCSCEEEECCCTTSSSC
T ss_pred             CCEeeeCCCCCCCeeEEeecCCCCCCc
Confidence            3455544 4788888888999998886

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=85.00  E-value=14  Score=29.93  Aligned_cols=105  Identities=11%  Similarity=0.194  Sum_probs=63.8

Q ss_pred             EEEEecCCcEEEEECC---CC----CeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           2 VVAGYDNGDLKMFDLK---TM----SLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         2 lasgs~Dg~iklWDl~---~~----~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +.....+|.+..|++.   .+    +++..+.....+-.++.++.   ...|..+-+|..|..+|.+.........+...
T Consensus       146 afV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~---~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~  222 (355)
T 3amr_A          146 AMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDE---YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA  222 (355)
T ss_dssp             EEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETT---TTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred             EEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCC---CCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence            3445567888888882   33    33444555677888888875   37899999997776666553211111111111


Q ss_pred             c-cc-CcCcEEEEEEc--CCCC-CEEEEEcCCCcEEEEecc
Q psy6415          75 K-AH-KATTVWAAKHL--PQNR-DLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        75 ~-~h-~~~~i~~v~fs--P~~~-~~las~s~Dg~V~lWd~~  110 (174)
                      . ++ .. .+-.+++-  +++. .+|||+-.+.+..+||.+
T Consensus       223 ~~g~l~a-DvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          223 DGRHLTR-DIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             SSSSBCS-CEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             cCCcccc-CcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence            1 11 12 56667663  4333 478888789999999993

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=84.99  E-value=13  Score=29.44  Aligned_cols=90  Identities=14%  Similarity=0.071  Sum_probs=45.7

Q ss_pred             EEecCCcEEEEECCCCCeEEE--ee----cCCCEEEEEecCCCCC-CCEEEEEeCC-----CcEEEEECCCccccc-cee
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWE--TN----LKNGVCGVDFDRRDIP-MNKLVATTLE-----AKLFVFDLKTLHREK-GFA   70 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~--~~----~~~~V~sv~f~~~~~~-~~~l~s~s~D-----g~I~iWD~~~~~~~~-~~~   70 (174)
                      .+..+|.|++++  .+.....  ..    .......|+|+|+-.. +...++-+..     +.|..|+........ ...
T Consensus        46 V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l  123 (352)
T 2ism_A           46 IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVV  123 (352)
T ss_dssp             EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEE
T ss_pred             EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEE
Confidence            344557788777  3332211  11    1356889999995111 1334444432     678888876431100 001


Q ss_pred             eeeec-----ccCcCcEEEEEEcCCCCCEEEEEc
Q psy6415          71 YLSEK-----AHKATTVWAAKHLPQNRDLFVTCG   99 (174)
Q Consensus        71 ~~~~~-----~h~~~~i~~v~fsP~~~~~las~s   99 (174)
                      ...+.     .|.   -..++|.|+ +.++++-+
T Consensus       124 ~~~~p~~~~~~h~---~~~l~~~pd-G~Lyv~~G  153 (352)
T 2ism_A          124 LDGIPARPHGLHS---GGRIAFGPD-GMLYVTTG  153 (352)
T ss_dssp             EEEECCCTTCCCC---CCCEEECTT-SCEEEECC
T ss_pred             EEeCCCCCCCCcC---CceEEECCC-CCEEEEEC
Confidence            11122     232   258899995 46777654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=84.72  E-value=12  Score=28.74  Aligned_cols=99  Identities=16%  Similarity=0.144  Sum_probs=59.1

Q ss_pred             cCCcEEEEECCCCCe---EEEe-------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee--
Q psy6415           7 DNGDLKMFDLKTMSL---KWET-------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE--   74 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~---~~~~-------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~--   74 (174)
                      .++.+.++++.....   ....       ....+.-.|+|+|.+   +.|.++.+.....||.++.......+.+...  
T Consensus        89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~---~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~  165 (255)
T 3qqz_A           89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD---HTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA  165 (255)
T ss_dssp             TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT---TEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred             CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC---CEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence            456777777654331   1111       123457899999964   6777776655556666542100001111000  


Q ss_pred             ---cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 ---KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ---~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                         ..+-. .+.+++|+|..+.+++.....+.+-..|.
T Consensus       166 ~~~~~~~~-d~S~l~~dp~tg~lliLS~~s~~L~~~d~  202 (255)
T 3qqz_A          166 LQRQFTLD-DVSGAEFNQQKNTLLVLSHESRALQEVTL  202 (255)
T ss_dssp             HHHTCCSS-CCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred             hccccccC-CceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence               01222 56799999988889999999999999988

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=83.79  E-value=20  Score=30.86  Aligned_cols=96  Identities=10%  Similarity=-0.022  Sum_probs=58.1

Q ss_pred             cCCcEEEEECCCCC--eEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           7 DNGDLKMFDLKTMS--LKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         7 ~Dg~iklWDl~~~~--~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      ....|+.-|+.+..  .......-.....|+|++.+  +..+.+=...+.|+.+++.......    ..+...-. ....
T Consensus        16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~--~~ly~sD~~~~~I~r~~~~g~~~~~----~v~~~~~~-~P~G   88 (619)
T 3s94_A           16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSH--GLIYWSDVSEEAIKRTEFNKTESVQ----NVVVSGLL-SPDG   88 (619)
T ss_dssp             CSSBEEEECCC---------CBCCSCEEEEEEETTT--TEEEEEETTTTEEEEEEC-----CE----EEECSSCS-CEEE
T ss_pred             ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCC--CEEEEEECCCCeEEEEEccCCCceE----EEEeCCCC-CcCe
Confidence            34678888887653  22222233557899999863  2334455567889999987642100    01111113 5678


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +++.+.++.++.+-...+.|.+.++
T Consensus        89 lAvD~~~~~ly~~d~~~~~I~v~~~  113 (619)
T 3s94_A           89 LACDWLGEKLYWTDSETNRIEVSNL  113 (619)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEEEecCCEEEEEeCCCCEEEEEEC
Confidence            9999977888898889999999998

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=83.21  E-value=16  Score=29.05  Aligned_cols=92  Identities=11%  Similarity=-0.009  Sum_probs=45.7

Q ss_pred             EEecCCcEEEEECCCCCe-EEEe----ecCCCEEEEEecCCCCC-CCEEEEEeC---C----CcEEEEECCCcc--cc-c
Q psy6415           4 AGYDNGDLKMFDLKTMSL-KWET----NLKNGVCGVDFDRRDIP-MNKLVATTL---E----AKLFVFDLKTLH--RE-K   67 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~-~~~~----~~~~~V~sv~f~~~~~~-~~~l~s~s~---D----g~I~iWD~~~~~--~~-~   67 (174)
                      .+..+|.|+++|. .+.. ....    ....+...|+|+|+-.. +...++-+.   +    +.|..|+.....  .. .
T Consensus        44 V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~  122 (354)
T 3a9g_A           44 VTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEV  122 (354)
T ss_dssp             EEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEE
T ss_pred             EEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCcc
Confidence            3445688888873 3431 1111    11356899999995111 233444332   3    567777766431  10 0


Q ss_pred             ceeeeeec---ccCcCcEEEEEEcCCCCCEEEEEcC
Q psy6415          68 GFAYLSEK---AHKATTVWAAKHLPQNRDLFVTCGG  100 (174)
Q Consensus        68 ~~~~~~~~---~h~~~~i~~v~fsP~~~~~las~s~  100 (174)
                      ...+..+.   .|.   -..++|.|+ +.++++-+.
T Consensus       123 ~~l~~~~~~~~~h~---~~~l~~~pD-G~Lyvt~G~  154 (354)
T 3a9g_A          123 KTLIDGIPGAYIHN---GGRIRFGPD-GMLYITTGD  154 (354)
T ss_dssp             EEEEEEEECCSSCC---CCCEEECTT-SCEEEECCC
T ss_pred             EEEEEcCCCCCCcC---CceEEECCC-CcEEEEECC
Confidence            00011111   232   357899995 567776543

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=82.77  E-value=24  Score=30.87  Aligned_cols=98  Identities=14%  Similarity=0.153  Sum_probs=59.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-----cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeee--ee
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-----LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYL--SE   74 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-----~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~--~~   74 (174)
                      |-.|..++-|.+||.++++......     ....|.++..++++   + |-.|+. +.|.+||.++.+... +...  ..
T Consensus       420 lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g---~-lwigt~-~Gl~~~~~~~~~~~~-~~~~~~~~  493 (795)
T 4a2l_A          420 VYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG---N-LWLGTL-SALVRFNPEQRSFTT-IEKEKDGT  493 (795)
T ss_dssp             EEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS---C-EEEEES-SCEEEEETTTTEEEE-CCBCTTCC
T ss_pred             EEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC---C-EEEEec-CceeEEeCCCCeEEE-cccccccc
Confidence            4567776778999998887654321     13568999888752   4 545555 458889987653211 1000  00


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .-... .|+++...++ +.+.+.+. . -|..||.
T Consensus       494 ~~~~~-~i~~i~~d~~-g~lWigt~-~-Gl~~~~~  524 (795)
T 4a2l_A          494 PVVSK-QITTLFRDSH-KRLWIGGE-E-GLSVFKQ  524 (795)
T ss_dssp             BCCCC-CEEEEEECTT-CCEEEEES-S-CEEEEEE
T ss_pred             ccCCc-eEEEEEECCC-CCEEEEeC-C-ceEEEeC
Confidence            01224 7899988885 44555443 4 4888887

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=81.91  E-value=16  Score=28.42  Aligned_cols=95  Identities=8%  Similarity=-0.098  Sum_probs=58.3

Q ss_pred             cCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEe--CCCcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415           7 DNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATT--LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s--~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      ..+.|.+.++.+....... ......+.|+++|..   ..|..+.  ..+.|...|+...... .  +  ....-. .-+
T Consensus        99 ~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~---g~ly~td~~~~~~I~r~~~dG~~~~-~--~--~~~~l~-~Pn  169 (318)
T 3sov_A           99 ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS---GFMYWTDWGEVPKIERAGMDGSSRF-I--I--INSEIY-WPN  169 (318)
T ss_dssp             TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG---TEEEEEECSSSCEEEEEETTSCSCE-E--E--ECSSCS-CEE
T ss_pred             CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC---CEEEEEecCCCCEEEEEEcCCCCeE-E--E--EECCCC-Ccc
Confidence            3456667776654332222 223456889999853   3444333  3578888888753211 0  1  011112 457


Q ss_pred             EEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          84 AAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                      .++|+|+++.++.+=+..+.|..+|++
T Consensus       170 glavd~~~~~lY~aD~~~~~I~~~d~d  196 (318)
T 3sov_A          170 GLTLDYEEQKLYWADAKLNFIHKSNLD  196 (318)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EEEEeccCCEEEEEECCCCEEEEEcCC
Confidence            899999878888888888999999984

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=81.42  E-value=9.1  Score=32.93  Aligned_cols=73  Identities=14%  Similarity=0.049  Sum_probs=44.0

Q ss_pred             EEEecCCCCCCCEEEEEeCCC-----------cEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcC-
Q psy6415          33 GVDFDRRDIPMNKLVATTLEA-----------KLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGG-  100 (174)
Q Consensus        33 sv~f~~~~~~~~~l~s~s~Dg-----------~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~-  100 (174)
                      ++++.|.+  +..++.|+.+.           .+.+||+.+.+......  ....+.. ...++++.+ ++.+++.||. 
T Consensus       190 ~~av~~~~--g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~--~~~~~~~-~~~~~~~~~-~g~lyv~GG~~  263 (656)
T 1k3i_A          190 AAAIEPTS--GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV--TVTKHDM-FCPGISMDG-NGQIVVTGGND  263 (656)
T ss_dssp             EEEEETTT--TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE--EECSCCC-SSCEEEECT-TSCEEEECSSS
T ss_pred             eEEEEecC--CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc--cCCCCCC-ccccccCCC-CCCEEEeCCCC
Confidence            44555521  36777887543           58899998865332111  1112222 333567777 5678898884 


Q ss_pred             CCcEEEEeccc
Q psy6415         101 SGSLNLWQLVS  111 (174)
Q Consensus       101 Dg~V~lWd~~~  111 (174)
                      +..|.+||.++
T Consensus       264 ~~~v~~yd~~t  274 (656)
T 1k3i_A          264 AKKTSLYDSSS  274 (656)
T ss_dssp             TTCEEEEEGGG
T ss_pred             CCceEEecCcC
Confidence            56899999854

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=80.34  E-value=29  Score=30.25  Aligned_cols=95  Identities=14%  Similarity=0.118  Sum_probs=57.2

Q ss_pred             EEEecCCcEEEEECCCCCeEEEe----ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee-ccc
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWET----NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE-KAH   77 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~----~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~-~~h   77 (174)
                      -.|..++-|..||.+++......    .....|.++..+++    ..|-.|+.++.|..+|.++.+..+ +   .. ...
T Consensus       377 Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~----g~lWigt~~~Gl~~~~~~~~~~~~-~---~~~~~~  448 (781)
T 3v9f_A          377 WIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSE----GNLWFGTYLGNISYYNTRLKKFQI-I---ELEKNE  448 (781)
T ss_dssp             EEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTT----SCEEEEETTEEEEEECSSSCEEEE-C---CSTTTC
T ss_pred             EEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCC----CCEEEEeccCCEEEEcCCCCcEEE-e---ccCCCC
Confidence            34565666888888765432211    12356889988765    346668887789999987653211 1   10 112


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .. .|+++...++ +.+.+. +.. -|..+|.
T Consensus       449 ~~-~v~~i~~d~~-g~lwig-t~~-Gl~~~~~  476 (781)
T 3v9f_A          449 LL-DVRVFYEDKN-KKIWIG-THA-GVFVIDL  476 (781)
T ss_dssp             CC-CEEEEEECTT-SEEEEE-ETT-EEEEEES
T ss_pred             CC-eEEEEEECCC-CCEEEE-ECC-ceEEEeC
Confidence            34 7999988874 445553 334 4888887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	174
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.92
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.9
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.87
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.86
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.86
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.85
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.84
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.84
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.84
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.84
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.84
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.83
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.82
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.81
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.81
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.81
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.79
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.79
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.77
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.77
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.76
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.75
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.75
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.75
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.74
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.74
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.74
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.73
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.7
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.62
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.58
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.58
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.56
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.56
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.5
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.37
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.29
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.29
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.25
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.22
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.13
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.11
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.0
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	98.95
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.92
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.59
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	98.57
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.53
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	98.45
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.31
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.08
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.02
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.61
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	97.56
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.48
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.45
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.43
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.39
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	96.76
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	96.61
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	96.56
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	96.53
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	96.35
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	96.15
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.06
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	96.04
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	95.59
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	95.42
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	95.14
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	94.57
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	94.08
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	91.45
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	90.49
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	89.75
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	89.51
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	89.18
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	89.02
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	88.75
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	88.53
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	81.71
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	81.45

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.2e-24  Score=176.70  Aligned_cols=130  Identities=17%  Similarity=0.298  Sum_probs=104.4

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-------ecCCCEEEEEecCCCCCCCEEEEEeCCCc---EEEEECCCccccccee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-------NLKNGVCGVDFDRRDIPMNKLVATTLEAK---LFVFDLKTLHREKGFA   70 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~---I~iWD~~~~~~~~~~~   70 (174)
                      +||+|+.||+|+|||+++++.....       .|...|++|+|+|++   +.|++|+.|++   |+|||+++.++...+.
T Consensus       197 ~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg---~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~  273 (393)
T d1sq9a_         197 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG---SLLAIAHDSNSFGCITLYETEFGERIGSLS  273 (393)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST---TEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred             EEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccccc---ceeeeecCCCCcceeeecccccceeeeeec
Confidence            3789999999999999998865432       356789999999974   89999999975   9999999876433221


Q ss_pred             --------eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415          71 --------YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP  142 (174)
Q Consensus        71 --------~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~  142 (174)
                              ...+.+|.. .|++|+|+| ++.+|||||.|++|+|||++                                
T Consensus       274 ~~~~~~~~~~~~~gH~~-~V~~l~fsp-d~~~l~S~s~D~~v~vWd~~--------------------------------  319 (393)
T d1sq9a_         274 VPTHSSQASLGEFAHSS-WVMSLSFND-SGETLCSAGWDGKLRFWDVK--------------------------------  319 (393)
T ss_dssp             BC--------CCBSBSS-CEEEEEECS-SSSEEEEEETTSEEEEEETT--------------------------------
T ss_pred             cccccccceeeeecccC-ceeeeccCC-CCCeeEEECCCCEEEEEECC--------------------------------
Confidence                    112358999 999999999 56799999999999999991                                


Q ss_pred             cccccccceeeeeecccccee----eeeeCCCCC
Q psy6415         143 MGVPGSLTLLQEATLSSQPIN----SLDWSADKL  172 (174)
Q Consensus       143 ~~~~~~~~ll~~~~~h~~~V~----~l~~spd~~  172 (174)
                           +++++.++.||..+|.    .+.|+|++.
T Consensus       320 -----~g~~~~~l~gH~~~v~~~~~~~~~~~~~~  348 (393)
T d1sq9a_         320 -----TKERITTLNMHCDDIEIEEDILAVDEHGD  348 (393)
T ss_dssp             -----TTEEEEEEECCGGGCSSGGGCCCBCTTSC
T ss_pred             -----CCCEEEEECCcCCcccCCccEEEECCCCC
Confidence                 2467888999988886    477888774

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=8e-23  Score=158.79  Aligned_cols=127  Identities=13%  Similarity=0.144  Sum_probs=107.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++|+.|+.|++||++++++.... .|...|++|+|+|++   +.|++|+.|++|++||++.......   .....|.. 
T Consensus       199 ~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~---~~l~s~s~d~~i~~~~~~~~~~~~~---~~~~~~~~-  271 (340)
T d1tbga_         199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG---NAFATGSDDATCRLFDLRADQELMT---YSHDNIIC-  271 (340)
T ss_dssp             EEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEE---ECCTTCCS-
T ss_pred             eEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCC---CEEEEEeCCCeEEEEeecccccccc---cccccccC-
Confidence            689999999999999999887664 467889999999974   8999999999999999998654321   22345666 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .|.+++|+| ++.+|++|+.||+|++||+.                            .         ++++.++.+|..
T Consensus       272 ~i~~~~~s~-~~~~l~~g~~dg~i~iwd~~----------------------------~---------~~~~~~~~~H~~  313 (340)
T d1tbga_         272 GITSVSFSK-SGRLLLAGYDDFNCNVWDAL----------------------------K---------ADRAGVLAGHDN  313 (340)
T ss_dssp             CEEEEEECS-SSCEEEEEETTSCEEEEETT----------------------------T---------CCEEEEECCCSS
T ss_pred             ceEEEEECC-CCCEEEEEECCCEEEEEECC----------------------------C---------CcEEEEEcCCCC
Confidence            899999999 56799999999999999991                            1         357899999999


Q ss_pred             ceeeeeeCCCCCC
Q psy6415         161 PINSLDWSADKLG  173 (174)
Q Consensus       161 ~V~~l~~spd~~~  173 (174)
                      +|++|+||||++-
T Consensus       314 ~V~~l~~s~d~~~  326 (340)
T d1tbga_         314 RVSCLGVTDDGMA  326 (340)
T ss_dssp             CEEEEEECTTSSC
T ss_pred             CEEEEEEeCCCCE
Confidence            9999999999864

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=3.2e-21  Score=147.06  Aligned_cols=130  Identities=12%  Similarity=0.217  Sum_probs=108.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCC-----------------CCCEEEEEeCCCcEEEEECCC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDI-----------------PMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~-----------------~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      +|++|+.||.|++||++++...... .+...+.+++|+|+..                 .+..+++++.|+.|++||+++
T Consensus       157 ~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~  236 (317)
T d1vyhc1         157 LIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST  236 (317)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred             EEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCC
Confidence            4789999999999999998877654 4567799999987642                 235789999999999999998


Q ss_pred             cccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCc
Q psy6415          63 LHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIP  142 (174)
Q Consensus        63 ~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~  142 (174)
                      .++     +.++.+|.. .|.+++|+| ++.+||+|+.||+|+|||++                            +   
T Consensus       237 ~~~-----~~~~~~~~~-~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~----------------------------~---  278 (317)
T d1vyhc1         237 GMC-----LMTLVGHDN-WVRGVLFHS-GGKFILSCADDKTLRVWDYK----------------------------N---  278 (317)
T ss_dssp             TEE-----EEEEECCSS-CEEEEEECS-SSSCEEEEETTTEEEEECCT----------------------------T---
T ss_pred             CcE-----EEEEeCCCC-CEEEEEECC-CCCEEEEEECCCeEEEEECC----------------------------C---
Confidence            654     345568999 999999999 46788999999999999991                            2   


Q ss_pred             cccccccceeeeeeccccceeeeeeCCCCCCC
Q psy6415         143 MGVPGSLTLLQEATLSSQPINSLDWSADKLGL  174 (174)
Q Consensus       143 ~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~~  174 (174)
                            ++++.++.+|+.+|++|+||||++-|
T Consensus       279 ------~~~~~~~~~h~~~V~~~~~s~~~~~l  304 (317)
T d1vyhc1         279 ------KRCMKTLNAHEHFVTSLDFHKTAPYV  304 (317)
T ss_dssp             ------SCCCEEEECCSSCEEEEEECSSSSCE
T ss_pred             ------CcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence                  35788999999999999999998743

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.9e-21  Score=150.48  Aligned_cols=123  Identities=15%  Similarity=0.182  Sum_probs=104.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +++|+.||.|++||+++++......+...|.+++|+|++   +.|++++.|+.|++||+++.+..      ....|.. .
T Consensus       198 ~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~------~~~~~~~-~  267 (337)
T d1gxra_         198 LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG---EWLAVGMESSNVEVLHVNKPDKY------QLHLHES-C  267 (337)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTS---SEEEEEETTSCEEEEETTSSCEE------EECCCSS-C
T ss_pred             cccccccccccccccccceeecccccccceEEEEEcccc---cccceeccccccccccccccccc------ccccccc-c
Confidence            788999999999999999988778888999999999974   89999999999999999986532      3357888 9


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccc
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQP  161 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~  161 (174)
                      |.+++|+| ++.+||||+.||+|++||++                            +|         +.+..+ +|..+
T Consensus       268 i~~v~~s~-~g~~l~s~s~Dg~i~iwd~~----------------------------~~---------~~~~~~-~~~~~  308 (337)
T d1gxra_         268 VLSLKFAY-CGKWFVSTGKDNLLNAWRTP----------------------------YG---------ASIFQS-KESSS  308 (337)
T ss_dssp             EEEEEECT-TSSEEEEEETTSEEEEEETT----------------------------TC---------CEEEEE-ECSSC
T ss_pred             cceEEECC-CCCEEEEEeCCCeEEEEECC----------------------------CC---------CEEEEc-cCCCC
Confidence            99999999 55799999999999999991                            22         344444 57899


Q ss_pred             eeeeeeCCCCCC
Q psy6415         162 INSLDWSADKLG  173 (174)
Q Consensus       162 V~~l~~spd~~~  173 (174)
                      |++++||||++-
T Consensus       309 v~~~~~s~d~~~  320 (337)
T d1gxra_         309 VLSCDISVDDKY  320 (337)
T ss_dssp             EEEEEECTTSCE
T ss_pred             EEEEEEeCCCCE
Confidence            999999999864

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.86  E-value=9.3e-21  Score=149.91  Aligned_cols=127  Identities=10%  Similarity=0.137  Sum_probs=105.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE--E-eecCCCEEEEEecCCCCCCCEEEEEeC--CCcEEEEECCCcccccceeeeeec
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW--E-TNLKNGVCGVDFDRRDIPMNKLVATTL--EAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~--~-~~~~~~V~sv~f~~~~~~~~~l~s~s~--Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      +||+|+.||+|+|||++++....  . ..|...|.+|+|+|++   +.|++++.  +..++|||+++.+..     .++.
T Consensus        72 ~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~---~~l~~~~~~~~~~~~v~~~~~~~~~-----~~l~  143 (311)
T d1nr0a1          72 YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES---KRIAAVGEGRERFGHVFLFDTGTSN-----GNLT  143 (311)
T ss_dssp             EEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS---CEEEEEECCSSCSEEEEETTTCCBC-----BCCC
T ss_pred             eEeccccCceEeeeeeeccccccccccccccCccccccccccc---ccccccccccccccccccccccccc-----cccc
Confidence            48999999999999998876432  2 3467889999999974   78888875  567999999986543     3456


Q ss_pred             ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee
Q psy6415          76 AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA  155 (174)
Q Consensus        76 ~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~  155 (174)
                      +|.. .|++++|+|+++.+||||+.||+|++||+                             .        +.+++..+
T Consensus       144 ~h~~-~v~~v~~~~~~~~~l~sgs~d~~i~i~d~-----------------------------~--------~~~~~~~~  185 (311)
T d1nr0a1         144 GQAR-AMNSVDFKPSRPFRIISGSDDNTVAIFEG-----------------------------P--------PFKFKSTF  185 (311)
T ss_dssp             CCSS-CEEEEEECSSSSCEEEEEETTSCEEEEET-----------------------------T--------TBEEEEEE
T ss_pred             cccc-ccccccccccceeeecccccccccccccc-----------------------------c--------cccccccc
Confidence            8988 99999999977778999999999999999                             1        13567888


Q ss_pred             eccccceeeeeeCCCCCC
Q psy6415         156 TLSSQPINSLDWSADKLG  173 (174)
Q Consensus       156 ~~h~~~V~~l~~spd~~~  173 (174)
                      .+|+.+|+++.|+||++-
T Consensus       186 ~~~~~~i~~v~~~p~~~~  203 (311)
T d1nr0a1         186 GEHTKFVHSVRYNPDGSL  203 (311)
T ss_dssp             CCCSSCEEEEEECTTSSE
T ss_pred             ccccccccccccCccccc
Confidence            999999999999999863

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.85  E-value=7.2e-21  Score=152.98  Aligned_cols=131  Identities=16%  Similarity=0.257  Sum_probs=102.8

Q ss_pred             CEEEEecCCcEEEEECCCCCeE--EE-eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK--WE-TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~--~~-~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||+|+.||.|+|||+++++..  .. ..|...|++|+|+|++   ++|++|+.|++|+|||+++....   ....+..|
T Consensus        21 ~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~---~~l~s~s~D~~i~vWd~~~~~~~---~~~~~~~~   94 (371)
T d1k8kc_          21 QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS---NRIVTCGTDRNAYVWTLKGRTWK---PTLVILRI   94 (371)
T ss_dssp             EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT---TEEEEEETTSCEEEEEEETTEEE---EEEECCCC
T ss_pred             EEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCC---CEEEEEECCCeEEEEeecccccc---cccccccc
Confidence            4789999999999999887643  33 3477899999999974   89999999999999999875432   12344578


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|.+++|+| ++..|++|+.|++|++|+++.    .                      .       ....+.....+
T Consensus        95 ~~-~v~~i~~~p-~~~~l~~~s~d~~i~i~~~~~----~----------------------~-------~~~~~~~~~~~  139 (371)
T d1k8kc_          95 NR-AARCVRWAP-NEKKFAVGSGSRVISICYFEQ----E----------------------N-------DWWVCKHIKKP  139 (371)
T ss_dssp             SS-CEEEEEECT-TSSEEEEEETTSSEEEEEEET----T----------------------T-------TEEEEEEECTT
T ss_pred             cc-ccccccccc-ccccceeecccCcceeeeeec----c----------------------c-------ccccccccccc
Confidence            88 999999999 467899999999999999911    0                      0       01123455678


Q ss_pred             cccceeeeeeCCCCC
Q psy6415         158 SSQPINSLDWSADKL  172 (174)
Q Consensus       158 h~~~V~~l~~spd~~  172 (174)
                      |...|.+++||||++
T Consensus       140 ~~~~v~~v~~~p~~~  154 (371)
T d1k8kc_         140 IRSTVLSLDWHPNSV  154 (371)
T ss_dssp             CCSCEEEEEECTTSS
T ss_pred             ccccccccccccccc
Confidence            899999999999986

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.9e-20  Score=148.90  Aligned_cols=130  Identities=15%  Similarity=0.190  Sum_probs=100.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe--------ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc----
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET--------NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG----   68 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~--------~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~----   68 (174)
                      +|++|+.||.|++||++++......        .|...|++++|+|++   +.|++++.|+.|++||+++......    
T Consensus       219 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~  295 (388)
T d1erja_         219 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG---QSVVSGSLDRSVKLWNLQNANNKSDSKTP  295 (388)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS---SEEEEEETTSEEEEEEC------------
T ss_pred             eEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCC---CEEEEEECCCcEEEEeccCCccccccccc
Confidence            4789999999999999988765432        246789999999974   8999999999999999987542211    


Q ss_pred             ---eeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccc
Q psy6415          69 ---FAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGV  145 (174)
Q Consensus        69 ---~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~  145 (174)
                         ........|.. .|.+++|+| ++.+|++|+.||+|++||++                            +      
T Consensus       296 ~~~~~~~~~~~~~~-~v~~~~~s~-~~~~l~sg~~dg~i~vwd~~----------------------------~------  339 (388)
T d1erja_         296 NSGTCEVTYIGHKD-FVLSVATTQ-NDEYILSGSKDRGVLFWDKK----------------------------S------  339 (388)
T ss_dssp             ---CEEEEEECCSS-CEEEEEECG-GGCEEEEEETTSEEEEEETT----------------------------T------
T ss_pred             cccceeeecccccc-eEEEEEECC-CCCEEEEEeCCCEEEEEECC----------------------------C------
Confidence               11223457888 999999999 56789999999999999991                            2      


Q ss_pred             ccccceeeeeeccccceeeeee------CCCCC
Q psy6415         146 PGSLTLLQEATLSSQPINSLDW------SADKL  172 (174)
Q Consensus       146 ~~~~~ll~~~~~h~~~V~~l~~------spd~~  172 (174)
                         ++++.++.+|+.+|.+++|      |||++
T Consensus       340 ---~~~~~~l~~H~~~V~~~~~~~~~~~spd~~  369 (388)
T d1erja_         340 ---GNPLLMLQGHRNSVISVAVANGSSLGPEYN  369 (388)
T ss_dssp             ---CCEEEEEECCSSCEEEEEECSSCTTCTTCE
T ss_pred             ---CcEEEEEeCCCCCEEEEEEecCcccCCCCC
Confidence               3578899999999999874      56654

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.84  E-value=3.5e-20  Score=146.53  Aligned_cols=103  Identities=14%  Similarity=0.305  Sum_probs=86.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceee--eeecccC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAY--LSEKAHK   78 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~--~~~~~h~   78 (174)
                      |++|+.||+|++||++++++.... .|...|++++|+|++   +.|++++.|+.|++||+++......+..  ....+|+
T Consensus       162 l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~---~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~  238 (311)
T d1nr0a1         162 IISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG---SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS  238 (311)
T ss_dssp             EEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred             ecccccccccccccccccccccccccccccccccccCccc---ccccccccccccccccccccccccccccccccccccc
Confidence            789999999999999998877654 467889999999974   8999999999999999998654332211  1234788


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . .|++++|+| ++.+||||+.||+|+|||+
T Consensus       239 ~-~V~~~~~s~-~~~~l~tgs~Dg~v~iwd~  267 (311)
T d1nr0a1         239 G-SVFGLTWSP-DGTKIASASADKTIKIWNV  267 (311)
T ss_dssp             S-CEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred             c-cccccccCC-CCCEEEEEeCCCeEEEEEC
Confidence            8 999999999 5679999999999999999

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.84  E-value=4.3e-20  Score=148.35  Aligned_cols=148  Identities=12%  Similarity=0.046  Sum_probs=108.0

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||+|+.|++|+|||++++......   .+...|.+++|+|++   +.|++++.|++|++|++........ .......|
T Consensus        65 ~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~---~~l~~~s~d~~i~i~~~~~~~~~~~-~~~~~~~~  140 (371)
T d1k8kc_          65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE---KKFAVGSGSRVISICYFEQENDWWV-CKHIKKPI  140 (371)
T ss_dssp             EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS---SEEEEEETTSSEEEEEEETTTTEEE-EEEECTTC
T ss_pred             EEEEEECCCeEEEEeeccccccccccccccccccccccccccc---ccceeecccCcceeeeeeccccccc-cccccccc
Confidence            4899999999999999887654332   356789999999974   8999999999999999887543211 12344578


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATL  157 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~  157 (174)
                      .. .|.+++|+| ++.+||+|+.||+|++||+........            +....+. ..      ....+++.+..+
T Consensus       141 ~~-~v~~v~~~p-~~~~l~s~s~D~~v~v~~~~~~~~~~~------------~~~~~~~-~~------~~~~~~~~~~~~  199 (371)
T d1k8kc_         141 RS-TVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEER------------PAPTPWG-SK------MPFGELMFESSS  199 (371)
T ss_dssp             CS-CEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCC------------CCCBTTB-SC------CCTTCEEEECCC
T ss_pred             cc-ccccccccc-cccceeccccCcEEEEEeeccCccccc------------ccccccc-cc------ccceeeeeeccC
Confidence            88 999999999 567999999999999999922100000            0000000 00      122357888899


Q ss_pred             cccceeeeeeCCCCCC
Q psy6415         158 SSQPINSLDWSADKLG  173 (174)
Q Consensus       158 h~~~V~~l~~spd~~~  173 (174)
                      |...|++++||||++-
T Consensus       200 ~~~~v~~~~~s~~g~~  215 (371)
T d1k8kc_         200 SCGWVHGVCFSANGSR  215 (371)
T ss_dssp             CSSCEEEEEECSSSSE
T ss_pred             ccCcEEEEEeeccccc
Confidence            9999999999999863

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=4.8e-21  Score=155.08  Aligned_cols=142  Identities=18%  Similarity=0.141  Sum_probs=96.1

Q ss_pred             EEEEecCCcEEEEECCCCC-------------e--EEEe----ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCC
Q psy6415           2 VVAGYDNGDLKMFDLKTMS-------------L--KWET----NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKT   62 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~-------------~--~~~~----~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~   62 (174)
                      +++++.||+|++||+....             .  ....    .+...+++|+|+|+    ..||+|+.|++|+|||+++
T Consensus       139 ~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d----g~lasgs~Dg~i~iwd~~~  214 (393)
T d1sq9a_         139 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER----GLIATGFNNGTVQISELST  214 (393)
T ss_dssp             EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT----SEEEEECTTSEEEEEETTT
T ss_pred             EEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCC----CEEEEEeCCCcEEEEeecc
Confidence            6889999999999985321             0  0111    12344889999996    5899999999999999998


Q ss_pred             ccccccee-eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCc---EEEEeccccccccccccceeeeecCCCCCCcccCC
Q psy6415          63 LHREKGFA-YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGS---LNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDI  138 (174)
Q Consensus        63 ~~~~~~~~-~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~---V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (174)
                      .++...+. ...+.+|.. +|++|+|+| ++.+||+|+.|++   |+|||+++...       +..+...          
T Consensus       215 ~~~~~~~~~~~~l~~h~~-~V~~l~~sp-dg~~l~sgs~D~t~~~i~lwd~~~g~~-------~~~l~~~----------  275 (393)
T d1sq9a_         215 LRPLYNFESQHSMINNSN-SIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGER-------IGSLSVP----------  275 (393)
T ss_dssp             TEEEEEEECCC---CCCC-CEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCE-------EEEECBC----------
T ss_pred             cccccccccccccccccc-eEEEccccc-ccceeeeecCCCCcceeeeccccccee-------eeeeccc----------
Confidence            76543322 234568999 999999999 5679999999975   99999932100       0001000          


Q ss_pred             CCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         139 DDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       139 dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                             ....+....+.||+.+|++|+||||++-
T Consensus       276 -------~~~~~~~~~~~gH~~~V~~l~fspd~~~  303 (393)
T d1sq9a_         276 -------THSSQASLGEFAHSSWVMSLSFNDSGET  303 (393)
T ss_dssp             ---------------CCBSBSSCEEEEEECSSSSE
T ss_pred             -------cccccceeeeecccCceeeeccCCCCCe
Confidence                   0112356677899999999999999864

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.3e-20  Score=142.41  Aligned_cols=124  Identities=19%  Similarity=0.296  Sum_probs=97.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +|++|+.||+|++||++.++++... .|...|.++++++     ++|++++.|++|+|||++..+....  ......|..
T Consensus       189 ~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~s~s~d~~i~iwd~~~~~~~~~--~~~~~~~~~  261 (342)
T d2ovrb2         189 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-----NILVSGNADSTVKIWDIKTGQCLQT--LQGPNKHQS  261 (342)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-----TEEEEEETTSCEEEEETTTCCEEEE--ECSTTSCSS
T ss_pred             EEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC-----CEEEEEcCCCEEEEEeccccccccc--ccccceeee
Confidence            3789999999999999999887654 4567799999886     7899999999999999988654321  222345667


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeee----
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEA----  155 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~----  155 (174)
                       .+.+++|+|   .+|++|+.||+|++||++                            .|         ++++++    
T Consensus       262 -~~~~~~~~~---~~~~s~s~Dg~i~iwd~~----------------------------tg---------~~i~~~~~~~  300 (342)
T d2ovrb2         262 -AVTCLQFNK---NFVITSSDDGTVKLWDLK----------------------------TG---------EFIRNLVTLE  300 (342)
T ss_dssp             -CEEEEEECS---SEEEEEETTSEEEEEETT----------------------------TC---------CEEEEEEECT
T ss_pred             -ceeecccCC---CeeEEEcCCCEEEEEECC----------------------------CC---------CEEEEEeccc
Confidence             888888876   489999999999999991                            22         234443    


Q ss_pred             -eccccceeeeeeCCCCC
Q psy6415         156 -TLSSQPINSLDWSADKL  172 (174)
Q Consensus       156 -~~h~~~V~~l~~spd~~  172 (174)
                       .+|..+|++++||||+.
T Consensus       301 ~~~~~~~v~~v~~s~~~~  318 (342)
T d2ovrb2         301 SGGSGGVVWRIRASNTKL  318 (342)
T ss_dssp             TGGGTCEEEEEEECSSEE
T ss_pred             CCCCCCCEEEEEECCCCC
Confidence             47889999999999864

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=8.8e-20  Score=144.36  Aligned_cols=126  Identities=18%  Similarity=0.268  Sum_probs=99.9

Q ss_pred             CEEEEecCCcEEEEECCCCCeE---EE---eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLK---WE---TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~---~~---~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      +||||+ ||+|+|||++++...   ..   ..|...|.+|+|+|++   +.|++|+.|++|+|||+......   ....+
T Consensus        65 ~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg---~~l~s~~~dg~i~iwd~~~~~~~---~~~~~  137 (337)
T d1gxra_          65 HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG---CTLIVGGEASTLSIWDLAAPTPR---IKAEL  137 (337)
T ss_dssp             EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS---SEEEEEESSSEEEEEECCCC--E---EEEEE
T ss_pred             EEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCC---CEEEEeecccccccccccccccc---ccccc
Confidence            478887 799999999765421   11   2456779999999974   89999999999999999865432   23345


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeee
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQE  154 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~  154 (174)
                      ..|.. .|..++|+| ++.+|++++.|+.|++|+++                            .         .++...
T Consensus       138 ~~~~~-~v~~~~~~~-~~~~l~s~~~d~~i~~~~~~----------------------------~---------~~~~~~  178 (337)
T d1gxra_         138 TSSAP-ACYALAISP-DSKVCFSCCSDGNIAVWDLH----------------------------N---------QTLVRQ  178 (337)
T ss_dssp             ECSSS-CEEEEEECT-TSSEEEEEETTSCEEEEETT----------------------------T---------TEEEEE
T ss_pred             ccccc-ccccccccc-cccccccccccccccccccc----------------------------c---------cccccc
Confidence            67888 999999999 56789999999999999991                            1         245677


Q ss_pred             eeccccceeeeeeCCCCC
Q psy6415         155 ATLSSQPINSLDWSADKL  172 (174)
Q Consensus       155 ~~~h~~~V~~l~~spd~~  172 (174)
                      ..+|..+|++++|+|++.
T Consensus       179 ~~~~~~~v~~l~~s~~~~  196 (337)
T d1gxra_         179 FQGHTDGASCIDISNDGT  196 (337)
T ss_dssp             ECCCSSCEEEEEECTTSS
T ss_pred             cccccccccccccccccc
Confidence            788999999999999875

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=6.1e-20  Score=139.87  Aligned_cols=97  Identities=21%  Similarity=0.241  Sum_probs=85.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++|+.||.|++||+++++++... .|...|.+++|+|++   +.|++|+.||+|+|||+++.+++     .++.+|.. 
T Consensus       220 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~h~~-  290 (317)
T d1vyhc1         220 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG---KFILSCADDKTLRVWDYKNKRCM-----KTLNAHEH-  290 (317)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS---SCEEEEETTTEEEEECCTTSCCC-----EEEECCSS-
T ss_pred             eEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCC---CEEEEEECCCeEEEEECCCCcEE-----EEEcCCCC-
Confidence            689999999999999999887664 467889999999974   88999999999999999987643     45568999 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      +|++++|+|+ +.+||||+.||+|+|||
T Consensus       291 ~V~~~~~s~~-~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         291 FVTSLDFHKT-APYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             CEEEEEECSS-SSCEEEEETTSEEEEEC
T ss_pred             CEEEEEEcCC-CCEEEEEeCCCeEEEeC
Confidence            9999999994 56889999999999997

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.81  E-value=2.2e-19  Score=138.57  Aligned_cols=129  Identities=13%  Similarity=0.194  Sum_probs=91.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECC-----------------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLK-----------------   61 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~-----------------   61 (174)
                      +||||+.||+|++||++++++....  .|...|.+++|+|++    .+++++.|++|++|++.                 
T Consensus        26 ~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g----~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~  101 (299)
T d1nr0a2          26 TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG----DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQ  101 (299)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS----CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSC
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccc----eeecccceeeEEEeccCCcccccccccccccccc
Confidence            4789999999999999988876553  355678888888763    34455555666666543                 


Q ss_pred             -----------------------------------------------------------------Ccccccceeeeeecc
Q psy6415          62 -----------------------------------------------------------------TLHREKGFAYLSEKA   76 (174)
Q Consensus        62 -----------------------------------------------------------------~~~~~~~~~~~~~~~   76 (174)
                                                                                       +.+..    ......
T Consensus       102 ~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~----~~~~~~  177 (299)
T d1nr0a2         102 PLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVS----EVKTIV  177 (299)
T ss_dssp             EEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEE----EEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccc
Confidence                                                                             22110    001125


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeee
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEAT  156 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~  156 (174)
                      |.. .|.+++|+| ++..|++++.||.|++||+++                            +.      ....+..+.
T Consensus       178 ~~~-~i~~~~~~~-~~~~l~~~~~d~~i~~~~~~~----------------------------~~------~~~~~~~~~  221 (299)
T d1nr0a2         178 HPA-EITSVAFSN-NGAFLVATDQSRKVIPYSVAN----------------------------NF------ELAHTNSWT  221 (299)
T ss_dssp             CSS-CEEEEEECT-TSSEEEEEETTSCEEEEEGGG----------------------------TT------EESCCCCCC
T ss_pred             ccc-ccccccccc-ccccccccccccccccccccc----------------------------cc------ccccccccc
Confidence            677 899999999 567899999999999999911                            10      112356678


Q ss_pred             ccccceeeeeeCCCCCC
Q psy6415         157 LSSQPINSLDWSADKLG  173 (174)
Q Consensus       157 ~h~~~V~~l~~spd~~~  173 (174)
                      +|..+|++++|+|+++-
T Consensus       222 ~h~~~v~~l~~s~~~~~  238 (299)
T d1nr0a2         222 FHTAKVACVSWSPDNVR  238 (299)
T ss_dssp             CCSSCEEEEEECTTSSE
T ss_pred             ccccccccccccccccc
Confidence            89999999999999863

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.81  E-value=1.9e-19  Score=139.45  Aligned_cols=98  Identities=19%  Similarity=0.219  Sum_probs=84.3

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEe---ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWET---NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~---~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +||+|+.||+|++||++........   .+...|.+++|+|++   +.|++|+.||+|+|||+++.++     +.++.+|
T Consensus       240 ~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~H  311 (340)
T d1tbga_         240 AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG---RLLLAGYDDFNCNVWDALKADR-----AGVLAGH  311 (340)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSS---CEEEEEETTSCEEEEETTTCCE-----EEEECCC
T ss_pred             EEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCC---CEEEEEECCCEEEEEECCCCcE-----EEEEcCC
Confidence            4789999999999999988776544   245679999999974   8999999999999999998654     3456799


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      .. +|++++|+| ++.+|||||.||+|+|||
T Consensus       312 ~~-~V~~l~~s~-d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         312 DN-RVSCLGVTD-DGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SS-CEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred             CC-CEEEEEEeC-CCCEEEEEccCCEEEEeC
Confidence            99 999999999 566889999999999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=2.6e-19  Score=137.69  Aligned_cols=127  Identities=13%  Similarity=0.294  Sum_probs=99.7

Q ss_pred             EEEEecC-CcEEEEECCCCCeEEEe--ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           2 VVAGYDN-GDLKMFDLKTMSLKWET--NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         2 lasgs~D-g~iklWDl~~~~~~~~~--~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      ++.|+.| +.|++|+++........  .+...|.+++|+|++   .+|++|+.||.|++||+++.+..    ...+.+|.
T Consensus       133 ~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~g~~dg~i~i~d~~~~~~~----~~~~~~h~  205 (287)
T d1pgua2         133 VAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE---TYIAAGDVMGKILLYDLQSREVK----TSRWAFRT  205 (287)
T ss_dssp             EEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEE----ECCSCCCS
T ss_pred             eeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCc---cccccccccccccceeecccccc----cccccccc
Confidence            4455555 57999999876655443  245679999999974   89999999999999999886532    12345888


Q ss_pred             cCcEEEEEEcCC---------CCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCcccccccc
Q psy6415          79 ATTVWAAKHLPQ---------NRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSL  149 (174)
Q Consensus        79 ~~~i~~v~fsP~---------~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~  149 (174)
                      . .|.+++|+|.         +..+||||+.|++|++||++                            .+        .
T Consensus       206 ~-~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~----------------------------~~--------~  248 (287)
T d1pgua2         206 S-KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK----------------------------RP--------M  248 (287)
T ss_dssp             S-CEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS----------------------------CT--------T
T ss_pred             c-ccceeeecccccccccccCCCCeeEeecCCCeEEEEECC----------------------------CC--------C
Confidence            8 9999999984         34689999999999999991                            10        2


Q ss_pred             ceeeeeeccccceeeeeeCCCCC
Q psy6415         150 TLLQEATLSSQPINSLDWSADKL  172 (174)
Q Consensus       150 ~ll~~~~~h~~~V~~l~~spd~~  172 (174)
                      +++..+.+|..+|++++|+|++.
T Consensus       249 ~~~~~~~~h~~~V~~v~~~~~~~  271 (287)
T d1pgua2         249 KIIKALNAHKDGVNNLLWETPST  271 (287)
T ss_dssp             CCEEETTSSTTCEEEEEEEETTE
T ss_pred             eEEEEeCCCCCCeEEEEECCCCE
Confidence            46778889999999999999864

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=2.8e-19  Score=138.45  Aligned_cols=118  Identities=14%  Similarity=0.233  Sum_probs=92.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++++.||+|++||++++.+.... .|...|.+++|++     +.|++|+.||+|++||+++...       .+..|.. 
T Consensus       216 ~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~-----~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~-  282 (355)
T d1nexb2         216 CISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-----KFLVSAAADGSIRGWDANDYSR-------KFSYHHT-  282 (355)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECS-----SEEEEECTTSEEEEEETTTCCE-------EEEEECT-
T ss_pred             eecccccceEEeeecccccccccccccccccccccccc-----ceeeeeecccccccccccccce-------ecccccC-
Confidence            788999999999999999887665 4677899999986     7899999999999999987542       2235666 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceee-eeeccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQ-EATLSS  159 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~-~~~~h~  159 (174)
                      .+.++.+.|.++.+|++| .||+|+|||++                            +|         +++. .+.+|.
T Consensus       283 ~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~----------------------------tg---------~~~~~~~~~~~  324 (355)
T d1nexb2         283 NLSAITTFYVSDNILVSG-SENQFNIYNLR----------------------------SG---------KLVHANILKDA  324 (355)
T ss_dssp             TCCCCCEEEECSSEEEEE-ETTEEEEEETT----------------------------TC---------CBCCSCTTTTC
T ss_pred             CceEEEEEcCCCCEEEEE-eCCEEEEEECC----------------------------CC---------CEEEEEecCCC
Confidence            677665444366776665 59999999991                            22         3443 567899


Q ss_pred             cceeeeeeCCC
Q psy6415         160 QPINSLDWSAD  170 (174)
Q Consensus       160 ~~V~~l~~spd  170 (174)
                      .+|++++|+|+
T Consensus       325 ~~V~~v~~~~~  335 (355)
T d1nexb2         325 DQIWSVNFKGK  335 (355)
T ss_dssp             SEEEEEEEETT
T ss_pred             CCEEEEEEcCC
Confidence            99999999986

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.79  E-value=1.6e-18  Score=133.76  Aligned_cols=102  Identities=19%  Similarity=0.215  Sum_probs=85.7

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE--EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW--ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~--~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +|++|+.||.|++||++++++..  ...|...|++++|+|++   +.|++++.|+.|++||+++.....  ....+.+|.
T Consensus       150 ~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~~~~~~~~~~~~--~~~~~~~h~  224 (299)
T d1nr0a2         150 FVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG---AFLVATDQSRKVIPYSVANNFELA--HTNSWTFHT  224 (299)
T ss_dssp             EEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTS---SEEEEEETTSCEEEEEGGGTTEES--CCCCCCCCS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccc--ccccccccc
Confidence            37899999999999998887543  34577889999999974   899999999999999998765332  123456788


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      . .|++++|+| ++.+||+|+.||+|++||+
T Consensus       225 ~-~v~~l~~s~-~~~~l~sgs~dg~i~iwd~  253 (299)
T d1nr0a2         225 A-KVACVSWSP-DNVRLATGSLDNSVIVWNM  253 (299)
T ss_dssp             S-CEEEEEECT-TSSEEEEEETTSCEEEEET
T ss_pred             c-ccccccccc-cccceEEEcCCCEEEEEEC
Confidence            8 999999999 5679999999999999999

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=8e-19  Score=143.74  Aligned_cols=104  Identities=11%  Similarity=-0.019  Sum_probs=87.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      ++++++||+|+|||+.+++++..+.....+.+|+|+|++   ++|++++.|++|++||+.+.++.....+....+|.+ .
T Consensus        35 ~V~~~~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDG---k~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~-~  110 (426)
T d1hzua2          35 SVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASG---RYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARS-V  110 (426)
T ss_dssp             EEEETTTTEEEEEETTTCSEEEEEECCSSEEEEEECTTS---CEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEE-E
T ss_pred             EEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCC---CEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcc-e
Confidence            588999999999999999998887777789999999975   899999999999999999876543333333446777 7


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +.+++|+|++..+++++..+++|++||.
T Consensus       111 ~~s~~~spDG~~l~v~~~~~~~v~i~d~  138 (426)
T d1hzua2         111 ESSKFKGYEDRYTIAGAYWPPQFAIMDG  138 (426)
T ss_dssp             EECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred             EEeeeecCCCCEEEEeecCCCeEEEEcC
Confidence            8899999976666788889999999999

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.5e-18  Score=131.52  Aligned_cols=102  Identities=18%  Similarity=0.317  Sum_probs=84.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee----cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN----LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~----~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|++|+.||+|++||++..+......    +...+.++++++     +.+++|+.||+|+|||+++++.++.+......+
T Consensus       229 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~  303 (342)
T d2ovrb2         229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-----NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG  303 (342)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-----SEEEEEETTSEEEEEETTTCCEEEEEEECTTGG
T ss_pred             EEEEEcCCCEEEEEecccccccccccccceeeeceeecccCC-----CeeEEEcCCCEEEEEECCCCCEEEEEecccCCC
Confidence            48999999999999999887665432    456788898886     789999999999999999987655443333346


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEcCCCc----EEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCGGSGS----LNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s~Dg~----V~lWd~  109 (174)
                      |.. .|++++|+| ++.+||+|+.||+    |++||+
T Consensus       304 ~~~-~v~~v~~s~-~~~~la~g~~dGt~~~~l~~~Df  338 (342)
T d2ovrb2         304 SGG-VVWRIRASN-TKLVCAVGSRNGTEETKLLVLDF  338 (342)
T ss_dssp             GTC-EEEEEEECS-SEEEEEEECSSSSSCCEEEEEEC
T ss_pred             CCC-CEEEEEECC-CCCEEEEEeCCCCCeeEEEEEeC
Confidence            778 999999999 5679999999996    999999

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=6.4e-18  Score=129.73  Aligned_cols=102  Identities=17%  Similarity=0.337  Sum_probs=83.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEE--eecCCCEEEEEecCCC-------CCCCEEEEEeCCCcEEEEECCCcccccceee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWE--TNLKNGVCGVDFDRRD-------IPMNKLVATTLEAKLFVFDLKTLHREKGFAY   71 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~--~~~~~~V~sv~f~~~~-------~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~   71 (174)
                      +||+|+.||.|++||++++.....  ..|...|.+++|+|..       .+.++|++|+.|++|+|||+++...    ..
T Consensus       176 ~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~----~~  251 (287)
T d1pgua2         176 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK----II  251 (287)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC----CE
T ss_pred             ccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCe----EE
Confidence            489999999999999998876543  3467889999999854       1356899999999999999987432    23


Q ss_pred             eeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          72 LSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        72 ~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ..+.+|.. .|++++|+|+ + .|+|+|.||+|++|++
T Consensus       252 ~~~~~h~~-~V~~v~~~~~-~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         252 KALNAHKD-GVNNLLWETP-S-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EETTSSTT-CEEEEEEEET-T-EEEEEETTSCEEEEEE
T ss_pred             EEeCCCCC-CeEEEEECCC-C-EEEEEECCCeEEEEEE
Confidence            45568999 9999999994 4 5899999999999997

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.75  E-value=2.6e-18  Score=142.03  Aligned_cols=104  Identities=11%  Similarity=-0.033  Sum_probs=87.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +++.++||+|.|||.++++++..+.....+..++|+|++   ++|++++.|++|++||+++.+......+.....|.+ .
T Consensus        35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG---~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~-~  110 (432)
T d1qksa2          35 SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG---RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS-I  110 (432)
T ss_dssp             EEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS---CEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE-E
T ss_pred             EEEEcCCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCC---CEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCC-e
Confidence            589999999999999999998887766789999999975   999999999999999998876432222333345666 7


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      +++++|+|++..++|+++.+++|+|||.
T Consensus       111 ~~s~~~SpDG~~l~vs~~~~~~v~i~d~  138 (432)
T d1qksa2         111 ETSKMEGWEDKYAIAGAYWPPQYVIMDG  138 (432)
T ss_dssp             EECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred             EEecccCCCCCEEEEEcCCCCeEEEEeC
Confidence            8888999976667799999999999999

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=1.1e-17  Score=132.03  Aligned_cols=99  Identities=14%  Similarity=0.193  Sum_probs=77.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe----ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET----NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~----~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +++|+.||.|++||++..+.....    .+...|.+++|+|+.  +..|++++.|+.|+|||+++.+..     .++.+|
T Consensus       175 ~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~--~~~l~s~~~d~~i~iwd~~~~~~~-----~~l~~~  247 (325)
T d1pgua1         175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS--GEFVITVGSDRKISCFDGKSGEFL-----KYIEDD  247 (325)
T ss_dssp             EEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT--CCEEEEEETTCCEEEEETTTCCEE-----EECCBT
T ss_pred             EEEeecccccccccccccccceecccccCCCCccEEeeecccc--ceeccccccccceeeeeecccccc-----cccccc
Confidence            678999999999999887765443    245669999999964  478999999999999999987643     345566


Q ss_pred             CcCcEEEEEEc---CCCCCEEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHL---PQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fs---P~~~~~las~s~Dg~V~lWd~  109 (174)
                      .. ++.++.|+   | ++.+|++++.||+|+|||+
T Consensus       248 ~~-~v~~~~~s~~~~-dg~~l~s~s~D~~i~iwd~  280 (325)
T d1pgua1         248 QE-PVQGGIFALSWL-DSQKFATVGADATIRVWDV  280 (325)
T ss_dssp             TB-CCCSCEEEEEES-SSSEEEEEETTSEEEEEET
T ss_pred             cc-ccccceeeeecc-CCCEEEEEeCCCeEEEEEC
Confidence            66 55444443   4 4568999999999999999

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=2.8e-17  Score=126.93  Aligned_cols=102  Identities=18%  Similarity=0.302  Sum_probs=81.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +||||+.||+|+|||+++++++..+. |...|++|+|+|+    +.|++|+.|++|++||+...++....   ....+..
T Consensus        25 ~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~----~~l~s~s~D~~i~iw~~~~~~~~~~~---~~~~~~~   97 (355)
T d1nexb2          25 YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG----GILVSGSTDRTVRVWDIKKGCCTHVF---EGHNSTV   97 (355)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT----TEEEEEETTCCEEEEETTTTEEEEEE---CCCSSCE
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC----CEEEEEeccccccccccccccccccc---ccccccc
Confidence            48999999999999999998877654 7789999999984    78999999999999999986543211   1122333


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                       .+....++| +...+++++.|++|++||+++
T Consensus        98 -~~~~~~~~~-~~~~~~~~~~d~~i~iw~~~~  127 (355)
T d1nexb2          98 -RCLDIVEYK-NIKYIVTGSRDNTLHVWKLPK  127 (355)
T ss_dssp             -EEEEEEEET-TEEEEEEEETTSEEEEEECCC
T ss_pred             -ccccccccc-ccceeeeecCCCcEEEEEccC
Confidence             456677888 567899999999999999944

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.74  E-value=2.8e-17  Score=130.29  Aligned_cols=143  Identities=20%  Similarity=0.217  Sum_probs=103.9

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCccccccee--eeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFA--YLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~--~~~~~~h~~   79 (174)
                      +++|+.++.|++||+++........+......+.+++.+  ++.|++|+.|+.|++||+++......+.  .....+|..
T Consensus       178 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~  255 (388)
T d1erja_         178 LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD--GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD  255 (388)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT--CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS
T ss_pred             ccccccceeeeeeeccccccccccccccccccccccCCC--CCeEEEEcCCCeEEEeecccCccceeeccccccccCCCC
Confidence            678999999999999998887766666777777777753  5889999999999999999865432221  112347888


Q ss_pred             CcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccc
Q psy6415          80 TTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSS  159 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~  159 (174)
                       .|++++|+| ++.+||+|+.||+|++||+.+.....                 ..   .     .......+.....|.
T Consensus       256 -~v~~l~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~-----------------~~---~-----~~~~~~~~~~~~~~~  308 (388)
T d1erja_         256 -SVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKS-----------------DS---K-----TPNSGTCEVTYIGHK  308 (388)
T ss_dssp             -CEEEEEECT-TSSEEEEEETTSEEEEEEC----------------------------------------CEEEEEECCS
T ss_pred             -CEEEEEECC-CCCEEEEEECCCcEEEEeccCCcccc-----------------cc---c-----cccccceeeeccccc
Confidence             999999999 56799999999999999992100000                 00   0     011224567788999


Q ss_pred             cceeeeeeCCCCCC
Q psy6415         160 QPINSLDWSADKLG  173 (174)
Q Consensus       160 ~~V~~l~~spd~~~  173 (174)
                      ..|.+++|+|+++-
T Consensus       309 ~~v~~~~~s~~~~~  322 (388)
T d1erja_         309 DFVLSVATTQNDEY  322 (388)
T ss_dssp             SCEEEEEECGGGCE
T ss_pred             ceEEEEEECCCCCE
Confidence            99999999999863

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.74  E-value=2e-17  Score=130.62  Aligned_cols=99  Identities=5%  Similarity=0.048  Sum_probs=80.8

Q ss_pred             ecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEE
Q psy6415           6 YDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWA   84 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~   84 (174)
                      +.|+.+++|+++++++..... |...|++++|+|++  ...+++++.|+.|++||++..+...  .......|.. .|++
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~--~~~~~~~~~~-~v~~  210 (325)
T d1pgua1         136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR--PMRSMTVGDDGSVVFYQGPPFKFSA--SDRTHHKQGS-FVRD  210 (325)
T ss_dssp             CSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSS--SCEEEEEETTTEEEEEETTTBEEEE--EECSSSCTTC-CEEE
T ss_pred             cccceEEEEeecccccceeeeecccccccccccccc--cceEEEeecccccccccccccccce--ecccccCCCC-ccEE
Confidence            457889999999998876654 67889999999974  3457899999999999998754322  1223457777 8999


Q ss_pred             EEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          85 AKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        85 v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++|+|+.+.+||+|+.||+|++||+
T Consensus       211 v~~~pd~~~~l~s~~~d~~i~iwd~  235 (325)
T d1pgua1         211 VEFSPDSGEFVITVGSDRKISCFDG  235 (325)
T ss_dssp             EEECSTTCCEEEEEETTCCEEEEET
T ss_pred             eeeccccceeccccccccceeeeee
Confidence            9999987889999999999999999

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-16  Score=120.43  Aligned_cols=159  Identities=14%  Similarity=0.144  Sum_probs=99.6

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccce----------
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGF----------   69 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~----------   69 (174)
                      +||||+.||+|+|||+++++++..+. |...|.+|+|++     +.|++|+.|++|++||++........          
T Consensus        27 ~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~-----~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~  101 (293)
T d1p22a2          27 KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE-----RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL  101 (293)
T ss_dssp             EEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCS-----SEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEE
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeeccc-----ceeecccccccccccccccccccccccccccccccc
Confidence            48999999999999999999887654 778899999875     78999999999999999875311000          


Q ss_pred             ----------------------------eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccc-ccc
Q psy6415          70 ----------------------------AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADT-NLC  120 (174)
Q Consensus        70 ----------------------------~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~-~~~  120 (174)
                                                  ....+..|.. .|..+.+.+   ..+++++.|++|++||+.+...... .+.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~---~~~~~~s~d~~i~~~d~~~~~~~~~~~~~  177 (293)
T d1p22a2         102 RFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVVDFDD---KYIVSASGDRTIKVWNTSTCEFVRTLNGH  177 (293)
T ss_dssp             ECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS-CEEEEEEET---TEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             cccccceeecccccceeEeecccccccccccccccccc-ccccceecc---cccccccCCCceeeecCCCCcEEEEEccc
Confidence                                        0111234555 677777765   4678899999999999933110000 000


Q ss_pred             ceeeeecCC-CCCCcccCCCCCcc-ccccccceeeeeeccccceeeeeeC
Q psy6415         121 SIFRYSSNY-PTQRTKPDIDDIPM-GVPGSLTLLQEATLSSQPINSLDWS  168 (174)
Q Consensus       121 ~~~~~~~~~-~~~~~~~~~dg~~~-~~~~~~~ll~~~~~h~~~V~~l~~s  168 (174)
                      ........+ +........||... ....+.+.+..+.+|...|..+.+.
T Consensus       178 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  227 (293)
T d1p22a2         178 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD  227 (293)
T ss_dssp             SSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECC
T ss_pred             ccccccccCCCCeEEEecCCCEEEEEecccceeeeeecccceeeeecccc
Confidence            000000011 10011112444221 1135567788888888888765543

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.73  E-value=5.6e-17  Score=126.66  Aligned_cols=123  Identities=11%  Similarity=-0.054  Sum_probs=98.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC--cEEEEECCCcccccceeeeeecccC
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA--KLFVFDLKTLHREKGFAYLSEKAHK   78 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg--~I~iWD~~~~~~~~~~~~~~~~~h~   78 (174)
                      +||+++ +|.|++||++++..+. ..|...|.+++|+|++   +.|++++.|.  .|++||+++++.      ..+..|.
T Consensus        17 ~~a~~~-~g~v~v~d~~~~~~~~-~~~~~~v~~~~~spDg---~~l~~~~~~~g~~v~v~d~~~~~~------~~~~~~~   85 (360)
T d1k32a3          17 LIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGDT---KVAFIHGTREGDFLGIYDYRTGKA------EKFEENL   85 (360)
T ss_dssp             CEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSSS---EEEEEEEETTEEEEEEEETTTCCE------EECCCCC
T ss_pred             EEEEEE-CCeEEEEECCCCcEEE-ccCCCCEEEEEECCCC---CEEEEEEcCCCCEEEEEECCCCcE------EEeeCCC
Confidence            356665 5899999999887765 4678889999999974   7888766543  799999998653      2345788


Q ss_pred             cCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecc
Q psy6415          79 ATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLS  158 (174)
Q Consensus        79 ~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h  158 (174)
                      . .|++++|+| ++..|++++.++.+++|++                             ++        .+....+..|
T Consensus        86 ~-~v~~~~~sp-dg~~l~~~~~~~~~~~~~~-----------------------------~~--------~~~~~~~~~~  126 (360)
T d1k32a3          86 G-NVFAMGVDR-NGKFAVVANDRFEIMTVDL-----------------------------ET--------GKPTVIERSR  126 (360)
T ss_dssp             C-SEEEEEECT-TSSEEEEEETTSEEEEEET-----------------------------TT--------CCEEEEEECS
T ss_pred             c-eEEeeeecc-cccccceeccccccccccc-----------------------------cc--------cceeeeeecc
Confidence            8 999999999 5678999999999999999                             11        2345667788


Q ss_pred             ccceeeeeeCCCCCC
Q psy6415         159 SQPINSLDWSADKLG  173 (174)
Q Consensus       159 ~~~V~~l~~spd~~~  173 (174)
                      ...+.+++|||||+.
T Consensus       127 ~~~~~~~~~spdg~~  141 (360)
T d1k32a3         127 EAMITDFTISDNSRF  141 (360)
T ss_dssp             SSCCCCEEECTTSCE
T ss_pred             cccccchhhccceee
Confidence            899999999999864

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.6e-16  Score=118.31  Aligned_cols=127  Identities=16%  Similarity=0.230  Sum_probs=96.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee-cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN-LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~-~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      +++++.|++|++||++++++..... +...|..+.+++     ..|++++.|++|+|||+++....     ....+|.. 
T Consensus       151 ~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~-  219 (293)
T d1p22a2         151 IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD-----RLVVSGSSDNTIRLWDIECGACL-----RVLEGHEE-  219 (293)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET-----TEEEEEETTSCEEEEETTTCCEE-----EEECCCSS-
T ss_pred             cccccCCCceeeecCCCCcEEEEEcccccccccccCCC-----CeEEEecCCCEEEEEecccceee-----eeecccce-
Confidence            5788999999999999998876543 567788888875     78999999999999999986543     34457777 


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .+..+  ++ +...|++|+.||+|++||+.+....                    ....        ....+.++.+|+.
T Consensus       220 ~v~~~--~~-~~~~l~sg~~dg~i~iwd~~~~~~~--------------------~~~~--------~~~~~~~~~~H~~  268 (293)
T d1p22a2         220 LVRCI--RF-DNKRIVSGAYDGKIKVWDLVAALDP--------------------RAPA--------GTLCLRTLVEHSG  268 (293)
T ss_dssp             CEEEE--EC-CSSEEEEEETTSCEEEEEHHHHTST--------------------TSCT--------TTTEEEEECCCSS
T ss_pred             eeeec--cc-cceEEEEEcCCCEEEEEECCCCccc--------------------cccC--------CceeeEEecCCCC
Confidence            77654  44 4568999999999999999210000                    0001        1246889999999


Q ss_pred             ceeeeeeCCC
Q psy6415         161 PINSLDWSAD  170 (174)
Q Consensus       161 ~V~~l~~spd  170 (174)
                      +|++|+|+|.
T Consensus       269 ~V~~v~~d~~  278 (293)
T d1p22a2         269 RVFRLQFDEF  278 (293)
T ss_dssp             CCCCEEECSS
T ss_pred             CEEEEEEcCC
Confidence            9999999763

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=6.4e-15  Score=112.41  Aligned_cols=106  Identities=18%  Similarity=0.327  Sum_probs=76.3

Q ss_pred             EEEEecCCcEEEEECCCCCeEE----EeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccc----ee---
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKW----ETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKG----FA---   70 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~----~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~----~~---   70 (174)
                      +++|+.||.|++||+++.....    .......+.++.+.+..  +..+++++.||.+++|++........    ..   
T Consensus       163 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~  240 (342)
T d1yfqa_         163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE--QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC  240 (342)
T ss_dssp             EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG--GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred             eeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCC--CCEEEeecCCCeEEEEEecCCcceeeccccceeee
Confidence            6889999999999998765432    22234556666666643  47899999999999999876432100    00   


Q ss_pred             ---eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          71 ---YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        71 ---~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                         ......|.. .|++|+|+|+ +.+||||+.||+|++||+++
T Consensus       241 ~~~~~~~~~~~~-~v~~l~~sp~-~~~lasg~~Dg~v~vWD~~~  282 (342)
T d1yfqa_         241 HRLNLKDTNLAY-PVNSIEFSPR-HKFLYTAGSDGIISCWNLQT  282 (342)
T ss_dssp             CCCCTTCCSSCC-CEEEEEECTT-TCCEEEEETTSCEEEEETTT
T ss_pred             eeeccCCCcccc-cceeEEecCC-ccEEEEECCCCEEEEEECCC
Confidence               011235666 8999999995 56899999999999999943

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.58  E-value=1.2e-14  Score=113.14  Aligned_cols=98  Identities=12%  Similarity=0.092  Sum_probs=78.2

Q ss_pred             EEEEecC--CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDN--GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~D--g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      |++++.|  ..|++||+++++......+...|.+++|+|++   ++|++++.++.+++||+.+.+..     ..+..|..
T Consensus        57 l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  128 (360)
T d1k32a3          57 AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG---KFAVVANDRFEIMTVDLETGKPT-----VIERSREA  128 (360)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTS---SEEEEEETTSEEEEEETTTCCEE-----EEEECSSS
T ss_pred             EEEEEcCCCCEEEEEECCCCcEEEeeCCCceEEeeeecccc---cccceecccccccccccccccee-----eeeecccc
Confidence            4554444  37999999999888777788899999999975   89999999999999999886532     23456777


Q ss_pred             CcEEEEEEcCCCCCEEEE----------EcCCCcEEEEec
Q psy6415          80 TTVWAAKHLPQNRDLFVT----------CGGSGSLNLWQL  109 (174)
Q Consensus        80 ~~i~~v~fsP~~~~~las----------~s~Dg~V~lWd~  109 (174)
                       .+.+++|+|+ +.+||.          +..++.+++||+
T Consensus       129 -~~~~~~~spd-g~~la~~~~~~~~~~~~~~~~~~~v~d~  166 (360)
T d1k32a3         129 -MITDFTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDM  166 (360)
T ss_dssp             -CCCCEEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred             -cccchhhccc-eeeeeeeccccccceeeccccceeeecc
Confidence             8999999995 567774          345667999999

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=4.2e-15  Score=113.43  Aligned_cols=79  Identities=11%  Similarity=0.117  Sum_probs=66.0

Q ss_pred             eecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcE
Q psy6415          25 TNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSL  104 (174)
Q Consensus        25 ~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V  104 (174)
                      ..|.+.|++|+|+|++   ++||+||.||+|||||+++.....  ......+|.. +|.+++|+|.++.+|+||+.||+|
T Consensus         8 ~~h~d~I~~l~fsp~~---~~L~s~s~Dg~v~iwd~~~~~~~~--~~~~~~~h~~-~V~~v~f~~~~~~~l~sg~~d~~v   81 (342)
T d1yfqa_           8 QAPKDYISDIKIIPSK---SLLLITSWDGSLTVYKFDIQAKNV--DLLQSLRYKH-PLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             SCCSSCEEEEEEEGGG---TEEEEEETTSEEEEEEEETTTTEE--EEEEEEECSS-CEEEEEEEESSSEEEEEEETTSCE
T ss_pred             CCCCCCEEEEEEeCCC---CEEEEEECCCeEEEEEccCCCcce--EEEEecCCCC-CEEEEEEeCCCCCEEEEcccccce
Confidence            3577889999999974   899999999999999998754321  1223337888 999999999777799999999999


Q ss_pred             EEEec
Q psy6415         105 NLWQL  109 (174)
Q Consensus       105 ~lWd~  109 (174)
                      ++|++
T Consensus        82 ~~w~~   86 (342)
T d1yfqa_          82 LKVDL   86 (342)
T ss_dssp             EEECS
T ss_pred             eeeec
Confidence            99999

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.56  E-value=1.5e-14  Score=111.47  Aligned_cols=104  Identities=11%  Similarity=0.073  Sum_probs=74.2

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEeec---CCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETNL---KNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~~---~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~   76 (174)
                      +|++++.|++|++||+++++++.....   ...+.+++|+|++   +++ ++++.++.|++||+++.+............
T Consensus         3 ~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg---~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~   79 (337)
T d1pbyb_           3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGG---RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE   79 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTS---SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred             EEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCC---CEEEEEECCCCeEEEEECCCCcEEEEEecCCCcc
Confidence            478999999999999999998776542   3457899999974   666 677899999999999976543322211112


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEEc------------CCCcEEEEec
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTCG------------GSGSLNLWQL  109 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~s------------~Dg~V~lWd~  109 (174)
                      +.. .++.++|+|++ ..+++++            .+..+.+||.
T Consensus        80 ~~~-~~~~v~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~d~  122 (337)
T d1pbyb_          80 RVK-SLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDA  122 (337)
T ss_dssp             EEE-CTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEET
T ss_pred             ccc-ceeeEEEcCCC-cEEEEeecCCcceeeeccccccceeeccc
Confidence            223 45689999955 4555555            4567777777

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.56  E-value=5.3e-14  Score=106.98  Aligned_cols=98  Identities=14%  Similarity=0.188  Sum_probs=81.2

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeecccCcC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAHKAT   80 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~   80 (174)
                      .++++.|++|++||+.+++++........+..|+|+|++   ++| ++++.++.|++||+.+.+..     .++..|.  
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~~g~~p~~va~spdG---~~l~v~~~~~~~i~v~d~~t~~~~-----~~~~~~~--   74 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDG---TKVYVANAHSNDVSIIDTATNNVI-----ATVPAGS--   74 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS---SEEEEEEGGGTEEEEEETTTTEEE-----EEEECSS--
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEECCCCceEEEEeCCC---CEEEEEECCCCEEEEEECCCCcee-----eeeeccc--
Confidence            367889999999999999988877777788999999975   766 67789999999999987643     3334554  


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+..++|+|++..+++++..++.+.+|+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (301)
T d1l0qa2          75 SPQGVAVSPDGKQVYVTNMASSTLSVIDT  103 (301)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             cccccccccccccccccccccceeeeccc
Confidence            46899999987778888999999999999

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=9.7e-14  Score=107.14  Aligned_cols=102  Identities=15%  Similarity=0.188  Sum_probs=72.7

Q ss_pred             EEEEecCCcEEEEECCCCC---eEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeeeccc
Q psy6415           2 VVAGYDNGDLKMFDLKTMS---LKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSEKAH   77 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~---~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h   77 (174)
                      +++++.|++|++||+.+..   ++....+...+.+|+|+|++   ++| +++..|+.|++|++........+  .....+
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG---~~L~v~~~~d~~i~~~~i~~~~~~~~~--~~~~~~   81 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDK---RYLYVGVRPEFRVLAYRIAPDDGALTF--AAESAL   81 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTS---SEEEEEETTTTEEEEEEECTTTCCEEE--EEEEEC
T ss_pred             EEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCC---CEEEEEECCCCeEEEEEEeCCCCcEEE--eeeccc
Confidence            5788999999999996543   23345677889999999975   777 45567999999999865432111  111123


Q ss_pred             CcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          78 KATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        78 ~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .. .+..++|+|++..+++++..+++|.+|+.
T Consensus        82 ~~-~p~~l~~spDg~~l~v~~~~~~~v~~~~~  112 (333)
T d1ri6a_          82 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL  112 (333)
T ss_dssp             SS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             CC-CceEEEEcCCCCEEeecccCCCceeeecc
Confidence            33 56789999966555555556889999998

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.37  E-value=2.3e-12  Score=105.81  Aligned_cols=105  Identities=14%  Similarity=0.045  Sum_probs=76.5

Q ss_pred             CEEEEecCCcEEEEECCCCCeEE--Ee----ecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeee
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKW--ET----NLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~--~~----~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +|++++.||+|++||+.+++...  ..    .+...+.+++|+|++   ++| ++++.+++|+|||.++.++...+....
T Consensus        75 ~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG---~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~  151 (432)
T d1qksa2          75 YLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWED---KYAIAGAYWPPQYVIMDGETLEPKKIQSTRG  151 (432)
T ss_dssp             EEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTT---TEEEEEEEETTEEEEEETTTCCEEEEEECCE
T ss_pred             EEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCC---CEEEEEcCCCCeEEEEeCccccceeeeccCC
Confidence            37889999999999999876432  22    223446677788875   765 788999999999999877543322111


Q ss_pred             e------cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          74 E------KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~------~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .      ..+.. ....|.++|++..++++.+.++.|.+||.
T Consensus       152 ~~~~~~~~~~~~-~~~~v~~s~dg~~~~vs~~~~~~i~~~d~  192 (432)
T d1qksa2         152 MTYDEQEYHPEP-RVAAILASHYRPEFIVNVKETGKILLVDY  192 (432)
T ss_dssp             ECTTTCCEESCC-CEEEEEECSSSSEEEEEETTTTEEEEEET
T ss_pred             ccccceeccCCC-ceeEEEECCCCCEEEEEEccCCeEEEEEc
Confidence            0      12334 67789999987777888999999999998

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.29  E-value=1.2e-11  Score=95.10  Aligned_cols=107  Identities=11%  Similarity=0.111  Sum_probs=75.1

Q ss_pred             CEEEEecCCcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeee-cc
Q psy6415           1 MVVAGYDNGDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSE-KA   76 (174)
Q Consensus         1 ~lasgs~Dg~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~-~~   76 (174)
                      +|++++.|++|.+||+++++++....  +...+.+|+|+|++   ..+ ++++.++.|++||+.+.+....+..... ..
T Consensus        10 ~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG---~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~   86 (346)
T d1jmxb_          10 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN---RTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE   86 (346)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS---SEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred             EEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCC---CEEEEEECCCCcEEEEeCccCeeeeeecccccccc
Confidence            48999999999999999999877654  34568899999975   665 6777899999999998764432211100 11


Q ss_pred             cCcCcEEEEEEcCCCCCEEEEE-----------cCCCcEEEEeccc
Q psy6415          77 HKATTVWAAKHLPQNRDLFVTC-----------GGSGSLNLWQLVS  111 (174)
Q Consensus        77 h~~~~i~~v~fsP~~~~~las~-----------s~Dg~V~lWd~~~  111 (174)
                      +.. .+..++|+|++..++++.           ..++.+.+|+.++
T Consensus        87 ~~~-~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~  131 (346)
T d1jmxb_          87 VGR-SMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD  131 (346)
T ss_dssp             EEE-CSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred             cCC-ceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccc
Confidence            112 356899999655444432           2578899999843

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.29  E-value=4.2e-11  Score=90.53  Aligned_cols=99  Identities=16%  Similarity=0.161  Sum_probs=79.1

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +++++.+++|++||+.+++++........+..++|++++  ...++++..++.+++||..+.+..     ..+ .+.. .
T Consensus        47 ~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~-~  117 (301)
T d1l0qa2          47 YVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG--KQVYVTNMASSTLSVIDTTSNTVA-----GTV-KTGK-S  117 (301)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEE-----EEE-ECSS-S
T ss_pred             EEEECCCCEEEEEECCCCceeeeeecccccccccccccc--ccccccccccceeeecccccceee-----eec-cccc-c
Confidence            467888999999999999988777666778999999975  234567788899999999886533     222 2334 6


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...+.|+|++..+++++..++.+.+|+.
T Consensus       118 ~~~~~~~~dg~~~~~~~~~~~~~~~~~~  145 (301)
T d1l0qa2         118 PLGLALSPDGKKLYVTNNGDKTVSVINT  145 (301)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             ceEEEeecCCCeeeeeeccccceeeeec
Confidence            7899999987777888899999999999

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.25  E-value=7.2e-12  Score=101.71  Aligned_cols=89  Identities=8%  Similarity=-0.016  Sum_probs=65.2

Q ss_pred             EEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceee
Q psy6415          45 KLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFR  124 (174)
Q Consensus        45 ~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~  124 (174)
                      .+++.+.||+|+|||+++.+.+     .++..| . .+..++||| |+..|++++.||+|++||+++             
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~-----~~l~~g-~-~~~~vafSP-DGk~l~~~~~d~~v~vwd~~t-------------   92 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIV-----KVIDTG-Y-AVHISRMSA-SGRYLLVIGRDARIDMIDLWA-------------   92 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEE-----EEEECC-S-SEEEEEECT-TSCEEEEEETTSEEEEEETTS-------------
T ss_pred             EEEEEcCCCEEEEEECCCCcEE-----EEEeCC-C-CeeEEEECC-CCCEEEEEeCCCCEEEEEccC-------------
Confidence            3578899999999999997654     344455 4 689999999 556889999999999999921             


Q ss_pred             eecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         125 YSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       125 ~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                                     |+..    ....+....+|...+.+++|||||+-
T Consensus        93 ---------------~~~~----~~~~i~~~~~~~~~~~s~~~spDG~~  122 (426)
T d1hzua2          93 ---------------KEPT----KVAEIKIGIEARSVESSKFKGYEDRY  122 (426)
T ss_dssp             ---------------SSCE----EEEEEECCSEEEEEEECCSTTCTTTE
T ss_pred             ---------------Ccee----EEEEEeCCCCCcceEEeeeecCCCCE
Confidence                           1100    00124455678888888889998864

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.22  E-value=1.3e-11  Score=94.76  Aligned_cols=67  Identities=21%  Similarity=0.166  Sum_probs=53.8

Q ss_pred             EEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeec-ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          34 VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEK-AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        34 v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~-~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++|++++   ++|++++.|++|.|||+++.+.++     ++. .|.. ...+++|+|++..++++++.+++|++||+
T Consensus         2 ~a~~~~~---~~l~~~~~~~~v~v~D~~t~~~~~-----t~~~~~~~-~p~~l~~spDG~~l~v~~~~~~~v~~~d~   69 (346)
T d1jmxb_           2 PALKAGH---EYMIVTNYPNNLHVVDVASDTVYK-----SCVMPDKF-GPGTAMMAPDNRTAYVLNNHYGDIYGIDL   69 (346)
T ss_dssp             CCCCTTC---EEEEEEETTTEEEEEETTTTEEEE-----EEECSSCC-SSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             ccCCCCC---cEEEEEcCCCEEEEEECCCCCEEE-----EEEcCCCC-CcceEEECCCCCEEEEEECCCCcEEEEeC
Confidence            4678763   889999999999999999976443     222 3444 67899999976667788999999999999

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.13  E-value=5.6e-11  Score=90.89  Aligned_cols=62  Identities=23%  Similarity=0.195  Sum_probs=48.1

Q ss_pred             CEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          44 NKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        44 ~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ++|++++.|++|+|||+++.+.++.+.   ...+.. .+.+++|+|++..++++++.|++|.+||+
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~---~~~~~~-~~~~i~~spDg~~l~v~~~~~~~v~v~D~   63 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVIT---IADAGP-TPMVPMVAPGGRIAYATVNKSESLVKIDL   63 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEE---CTTCTT-CCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEE---CCCCCC-CccEEEECCCCCEEEEEECCCCeEEEEEC
Confidence            579999999999999999876543221   122334 57899999966556688899999999999

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.11  E-value=2.1e-10  Score=93.63  Aligned_cols=92  Identities=7%  Similarity=0.023  Sum_probs=70.8

Q ss_pred             ecCCcEEEEECCCCCeEEEee------cCCCEEEEEecCCCCCCCEEEEEeC---------CCcEEEEECCCccccccee
Q psy6415           6 YDNGDLKMFDLKTMSLKWETN------LKNGVCGVDFDRRDIPMNKLVATTL---------EAKLFVFDLKTLHREKGFA   70 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~------~~~~V~sv~f~~~~~~~~~l~s~s~---------Dg~I~iWD~~~~~~~~~~~   70 (174)
                      ..|+.|.+||+.+++....+.      +...|.+++|+|++   +.||.++.         ++.+.|||+.+++.     
T Consensus        33 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg---~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-----  104 (470)
T d2bgra1          33 KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG---QFILLEYNYVKQWRHSYTASYDIYDLNKRQL-----  104 (470)
T ss_dssp             ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTS---SEEEEEEEEEECSSSCEEEEEEEEETTTTEE-----
T ss_pred             EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCC---CEEEEEECCcceeeeccCceEEEEECCCCcc-----
Confidence            358899999999998764432      23579999999974   88888753         57889999998652     


Q ss_pred             eeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          71 YLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        71 ~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                       ..+..|.. .+..++|||+ +..+|.. .|+.+.+|+.
T Consensus       105 -~~l~~~~~-~~~~~~~SPD-G~~ia~~-~~~~l~~~~~  139 (470)
T d2bgra1         105 -ITEERIPN-NTQWVTWSPV-GHKLAYV-WNNDIYVKIE  139 (470)
T ss_dssp             -CCSSCCCT-TEEEEEECSS-TTCEEEE-ETTEEEEESS
T ss_pred             -cccccCCc-cccccccccC-cceeeEe-ecccceEEEC
Confidence             23457777 8999999995 5566764 5778999998

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.00  E-value=1.8e-09  Score=83.53  Aligned_cols=98  Identities=17%  Similarity=0.181  Sum_probs=67.8

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEe--e-c----------CCCEEEEEecCCCCCCCEEEEEeCC----------CcEEEE
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWET--N-L----------KNGVCGVDFDRRDIPMNKLVATTLE----------AKLFVF   58 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~--~-~----------~~~V~sv~f~~~~~~~~~l~s~s~D----------g~I~iW   58 (174)
                      ++.++.++.+++||+.++......  . +          ..+...++++|++   ..++..+.+          ..|++|
T Consensus       209 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~---~~~~~~~~~~~~~~~~~~~~~v~v~  285 (355)
T d2bbkh_         209 LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL---DRIYLLVDQRDEWRHKTASRFVVVL  285 (355)
T ss_dssp             EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT---TEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred             EEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCC---CeEEEEeccCCceeecCCCCeEEEE
Confidence            567889999999999987653211  0 0          1233457888864   555544322          479999


Q ss_pred             ECCCcccccceeeeeecccCcCcEEEEEEcCCCCC-EEEEEcCCCcEEEEec
Q psy6415          59 DLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRD-LFVTCGGSGSLNLWQL  109 (174)
Q Consensus        59 D~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~-~las~s~Dg~V~lWd~  109 (174)
                      |+++.+...     ++ .+.. .+++++|+|++.. ++++++.|++|++||+
T Consensus       286 d~~t~~~~~-----~~-~~~~-~~~~~a~spDG~~~l~v~~~~d~~i~v~D~  330 (355)
T d2bbkh_         286 DAKTGERLA-----KF-EMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDA  330 (355)
T ss_dssp             ETTTCCEEE-----EE-EEEE-EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred             eCCCCcEEE-----Ee-cCCC-CEEEEEEcCCCCeEEEEEECCCCEEEEEEC
Confidence            999875432     22 2334 6889999997654 6788899999999999

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=98.95  E-value=1.1e-09  Score=83.88  Aligned_cols=61  Identities=13%  Similarity=0.103  Sum_probs=46.5

Q ss_pred             EEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          45 KLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        45 ~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+++++.|++|+|||+.....+.  .+.. ..|.+ .+..++|||++..++++++.|++|++|++
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~--~~~~-~~~~~-~v~~la~spDG~~L~v~~~~d~~i~~~~i   66 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALT--LTQV-VDVPG-QVQPMVVSPDKRYLYVGVRPEFRVLAYRI   66 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEE--EEEE-EECSS-CCCCEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EEEECCCCCcEEEEEEcCCCCeE--EEEE-EcCCC-CEeEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence            46788999999999997643221  1122 25667 89999999976656688888999999999

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.92  E-value=2.3e-08  Score=77.93  Aligned_cols=101  Identities=11%  Similarity=0.057  Sum_probs=67.5

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEee---c----------CCCEEEEEecCCCC-------CCCEEEEEeCCCcEEEEECC
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETN---L----------KNGVCGVDFDRRDI-------PMNKLVATTLEAKLFVFDLK   61 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~---~----------~~~V~sv~f~~~~~-------~~~~l~s~s~Dg~I~iWD~~   61 (174)
                      ++..+.++++.+|+..++.......   .          ......++++|++.       .+..+++...++.|.+||+.
T Consensus       227 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~  306 (373)
T d2madh_         227 IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL  306 (373)
T ss_pred             EEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECC
Confidence            3456778999999988775432111   0          11223344444321       12455667788899999999


Q ss_pred             CcccccceeeeeecccCcCcEEEEEEcCCCCC-EEEEEcCCCcEEEEec
Q psy6415          62 TLHREKGFAYLSEKAHKATTVWAAKHLPQNRD-LFVTCGGSGSLNLWQL  109 (174)
Q Consensus        62 ~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~-~las~s~Dg~V~lWd~  109 (174)
                      +++...     .+ .+.. .++.++|+|++.. ++++++.|++|++||+
T Consensus       307 t~~~~~-----~~-~~~~-~~~~~a~spDG~~~l~vt~~~d~~v~v~D~  348 (373)
T d2madh_         307 VGQTSS-----QI-SLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDA  348 (373)
T ss_pred             CCcEEE-----Ee-cCCC-CeeEEEECCCCCEEEEEEeCCCCeEEEEEC
Confidence            876432     22 3455 7899999996554 5689999999999999

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.59  E-value=4.4e-08  Score=79.48  Aligned_cols=96  Identities=9%  Similarity=0.079  Sum_probs=67.0

Q ss_pred             EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEc---------CCCc
Q psy6415          33 GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCG---------GSGS  103 (174)
Q Consensus        33 sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s---------~Dg~  103 (174)
                      ++.|.++    ..++. ..|+.|.+||+++++....+...++..|.. .|.+++|||+ +..||.++         .++.
T Consensus        21 ~~~W~~d----~~~~~-~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~-~i~~~~~SpD-g~~i~~~~~~~~~~r~s~~~~   93 (470)
T d2bgra1          21 SLRWISD----HEYLY-KQENNILVFNAEYGNSSVFLENSTFDEFGH-SINDYSISPD-GQFILLEYNYVKQWRHSYTAS   93 (470)
T ss_dssp             CCEECSS----SEEEE-ESSSCEEEEETTTCCEEEEECTTTTTTSSS-CCCEEEECTT-SSEEEEEEEEEECSSSCEEEE
T ss_pred             CCEeCCC----CEEEE-EcCCcEEEEECCCCCEEEEEchhhhhhccC-ccceeEECCC-CCEEEEEECCcceeeeccCce
Confidence            4677775    33444 458899999999876432222234456667 8999999995 56666664         3567


Q ss_pred             EEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeeccccceeeeeeCCCCCC
Q psy6415         104 LNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQPINSLDWSADKLG  173 (174)
Q Consensus       104 V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~~V~~l~~spd~~~  173 (174)
                      +.|||++                            .          ..+..+..|...+....|||||+-
T Consensus        94 ~~l~d~~----------------------------~----------~~~~~l~~~~~~~~~~~~SPDG~~  125 (470)
T d2bgra1          94 YDIYDLN----------------------------K----------RQLITEERIPNNTQWVTWSPVGHK  125 (470)
T ss_dssp             EEEEETT----------------------------T----------TEECCSSCCCTTEEEEEECSSTTC
T ss_pred             EEEEECC----------------------------C----------CcccccccCCccccccccccCcce
Confidence            8888881                            1          125567788888999999999975

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.57  E-value=8.7e-08  Score=73.74  Aligned_cols=100  Identities=10%  Similarity=0.008  Sum_probs=63.8

Q ss_pred             ecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEE----------eCCCcEEEEECCCcccccceeeeeec
Q psy6415           6 YDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVAT----------TLEAKLFVFDLKTLHREKGFAYLSEK   75 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~----------s~Dg~I~iWD~~~~~~~~~~~~~~~~   75 (174)
                      +.+++|.+||..+++++..... .....++|+|++   +.|+++          +.|+.|++||+++.+...........
T Consensus        25 ~~~~~v~v~D~~tg~~~~~~~~-g~~~~~a~SpDg---~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~  100 (355)
T d2bbkh_          25 AAVTQQFVIDGEAGRVIGMIDG-GFLPNPVVADDG---SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP  100 (355)
T ss_dssp             CSSEEEEEEETTTTEEEEEEEE-CSSCEEEECTTS---SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred             CCcCeEEEEECCCCcEEEEEEC-CCCCceEEcCCC---CEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcc
Confidence            3466799999999988765532 233479999985   666543          45899999999987654322111000


Q ss_pred             --ccCcCcEEEEEEcCCCCCEEE-EEcCCCcEEEEecc
Q psy6415          76 --AHKATTVWAAKHLPQNRDLFV-TCGGSGSLNLWQLV  110 (174)
Q Consensus        76 --~h~~~~i~~v~fsP~~~~~la-s~s~Dg~V~lWd~~  110 (174)
                        .... ....++|+|++..+++ ..+.+..+.+|+.+
T Consensus       101 ~~~~~~-~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~  137 (355)
T d2bbkh_         101 RFLVGT-YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE  137 (355)
T ss_dssp             CCCBSC-CGGGEEECTTSSEEEEEECSSSCEEEEEETT
T ss_pred             eeecCC-CCceEEEecCCCeeEEecCCCCceeeeeecC
Confidence              0111 2346889996554333 23567789999993

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.53  E-value=2.2e-07  Score=72.91  Aligned_cols=101  Identities=10%  Similarity=-0.087  Sum_probs=64.2

Q ss_pred             ecCCc--EEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEE----------eCCCcEEEEECCCcccccceeeee
Q psy6415           6 YDNGD--LKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVAT----------TLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         6 s~Dg~--iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~----------s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      +.+|+  |.+||..+++++....... ...++|+|++   ..|+.+          +.|++|++||..+.+.........
T Consensus        41 ~~~g~~~~~~~d~~~~~~~~~~~~~~-~~~~a~spDg---~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~  116 (368)
T d1mdah_          41 YFAGTTENWVSCAGCGVTLGHSLGAF-LSLAVAGHSG---SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD  116 (368)
T ss_dssp             TTCSSEEEEEEETTTTEEEEEEEECT-TCEEEECTTS---SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred             cCCCcceEEEEeCCCCcEEEEEeCCC-CCcceECCCC---CEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCc
Confidence            44555  5566999998766543222 2358899975   667654          358889999999876443221100


Q ss_pred             e-c-ccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          74 E-K-AHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        74 ~-~-~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      . . .... .-+.++|+|+++.++++...+++|.+||+++
T Consensus       117 ~~~~~~g~-~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~  155 (368)
T d1mdah_         117 APRFSVGP-RVHIIGNCASSACLLFFLFGSSAAAGLSVPG  155 (368)
T ss_dssp             SCSCCBSC-CTTSEEECTTSSCEEEEECSSSCEEEEEETT
T ss_pred             cceecccC-CccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence            0 0 0111 2346899997766666666789999999943

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=98.45  E-value=8.5e-07  Score=68.69  Aligned_cols=78  Identities=6%  Similarity=-0.037  Sum_probs=59.6

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCE--EEEEeCCCcEEEEECCCcccccceeeeeecccCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNK--LVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKA   79 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~--l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~   79 (174)
                      +++...++.|.+||+.+++.+....+...+.+++|+|++   +.  +++++.|++|+|||+++++.+     .++..+..
T Consensus       291 ~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG---~~~l~vt~~~d~~v~v~D~~tg~~~-----~~~~~~g~  362 (373)
T d2madh_         291 WKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDG---GPDLYALSAGTEVLHIYDAGAGDQD-----QSTVELGS  362 (373)
T ss_pred             EEeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCC---CEEEEEEeCCCCeEEEEECCCCCEE-----EEECCCCC
Confidence            356677889999999999988877777889999999975   53  468899999999999997643     34444544


Q ss_pred             CcEEEEEEc
Q psy6415          80 TTVWAAKHL   88 (174)
Q Consensus        80 ~~i~~v~fs   88 (174)
                       .-..+++.
T Consensus       363 -~P~~l~~~  370 (373)
T d2madh_         363 -GPQVLSVM  370 (373)
T ss_pred             -CCcEEEEe
Confidence             44555554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.31  E-value=2.1e-07  Score=76.52  Aligned_cols=142  Identities=9%  Similarity=-0.038  Sum_probs=87.6

Q ss_pred             cCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccc-ccee--eeeecccCc--C
Q psy6415           7 DNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHRE-KGFA--YLSEKAHKA--T   80 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~-~~~~--~~~~~~h~~--~   80 (174)
                      .++.+.|++..................++++|++   .++ +++..|++|.|||+++.... ....  ...+.++..  -
T Consensus       236 ~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDG---kyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~gl  312 (441)
T d1qnia2         236 DSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDG---KYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGL  312 (441)
T ss_dssp             TCCCCEEECSSSCSSEEEECCBSSCCCEEECTTS---CEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCS
T ss_pred             CCCcEEEEcccCCceEEEEeCCCCccCceECCCC---CEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeeccccc
Confidence            4677788877766665555444556778999985   654 67889999999999864311 0000  001111111  0


Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEeccccccccccccceeeeecCCCCCCcccCCCCCccccccccceeeeeecccc
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQLVSALRADTNLCSIFRYSSNYPTQRTKPDIDDIPMGVPGSLTLLQEATLSSQ  160 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ll~~~~~h~~  160 (174)
                      .....+|.| ++..+.|..-|.+|..|+++.+.+.-.                   .++..++  . ..--++...||..
T Consensus       313 gplh~~fd~-~g~~yts~~~ds~v~kw~~~~~~~~~~-------------------~~~~~~v--~-~~~~v~y~~GH~~  369 (441)
T d1qnia2         313 GPLHTTFDG-RGNAYTTLFIDSQVCKWNIADAIKHYN-------------------GDRVNYI--R-QKLDVQYQPGHNH  369 (441)
T ss_dssp             CEEEEEECS-SSEEEEEETTTTEEEEEEHHHHHHHHT-------------------TCCCCCE--E-EEEECSSCEEEEE
T ss_pred             CcccceecC-CceEEEcccccceEEEeccchhhhhhc-------------------cCCCcee--E-eccccccCCCCCc
Confidence            235678999 467889999999999999932222100                   0011010  0 0012445589999


Q ss_pred             ceeeeeeCCCCCCC
Q psy6415         161 PINSLDWSADKLGL  174 (174)
Q Consensus       161 ~V~~l~~spd~~~~  174 (174)
                      .+.+.+|+|||+.|
T Consensus       370 ~~~~~t~~pdGk~l  383 (441)
T d1qnia2         370 ASLTESRDADGKWL  383 (441)
T ss_dssp             ETTTTSTTCCCCEE
T ss_pred             cccccccCCCCcEE
Confidence            99999999999864

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.08  E-value=1.6e-05  Score=61.80  Aligned_cols=94  Identities=6%  Similarity=0.006  Sum_probs=59.6

Q ss_pred             ecCCcEEEEECCCCCeEEEeec-------------CCCEEEEEecCCCCCCCEEEEE-eCC--------CcEEEEECCCc
Q psy6415           6 YDNGDLKMFDLKTMSLKWETNL-------------KNGVCGVDFDRRDIPMNKLVAT-TLE--------AKLFVFDLKTL   63 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~~-------------~~~V~sv~f~~~~~~~~~l~s~-s~D--------g~I~iWD~~~~   63 (174)
                      ..++.+.++|+..+........             ..+...++++|++   ..+... ..+        ..|.+||..+.
T Consensus       228 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~---~~~~v~~~~~~~~~~~~~~~v~v~D~~t~  304 (368)
T d1mdah_         228 AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT---DGIMILTVEHSRSCLAAAENTSSVTASVG  304 (368)
T ss_dssp             CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT---TEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred             ecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCC---CEEEEEecCCCceeecCCceEEEEECCCC
Confidence            3456677777766554332110             1222346777764   554433 222        35999999987


Q ss_pred             ccccceeeeeecccCcCcEEEEEEcCCCCC-EEEEEcCCCcEEEEec
Q psy6415          64 HREKGFAYLSEKAHKATTVWAAKHLPQNRD-LFVTCGGSGSLNLWQL  109 (174)
Q Consensus        64 ~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~-~las~s~Dg~V~lWd~  109 (174)
                      +....     + .+.. .+++++|+|++.. ++++++.|++|++||.
T Consensus       305 ~~~~~-----~-~~~~-~~~~~a~spDG~~~ly~s~~~~~~v~v~D~  344 (368)
T d1mdah_         305 QTSGP-----I-SNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDA  344 (368)
T ss_dssp             CEEEC-----C-EEEE-EECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred             cEeEE-----e-cCCC-ceeEEEECCCCCEEEEEEeCCCCeEEEEEC
Confidence            64432     2 2334 7889999997654 6789999999999999

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.02  E-value=1.2e-05  Score=65.91  Aligned_cols=97  Identities=9%  Similarity=0.147  Sum_probs=64.4

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeec-------------------------------CCCEEEEEecCCCCCCCEE-EEE
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNL-------------------------------KNGVCGVDFDRRDIPMNKL-VAT   49 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~-------------------------------~~~V~sv~f~~~~~~~~~l-~s~   49 (174)
                      ++||+.+|+|.+||+.+++.+.....                               +-......++|++   .+| ++.
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDG---r~lfV~d   90 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDG---KYLFIND   90 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEE---EEEEEEE
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCC---CEEEEEc
Confidence            57899999999999998887654310                               1113334456653   666 556


Q ss_pred             eCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEE
Q psy6415          50 TLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNL  106 (174)
Q Consensus        50 s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~l  106 (174)
                      ..++.|.++|+++.++.+   +..+ .+.. ....++|+|++...++++..+..+.+
T Consensus        91 ~~~~rVavIDl~t~k~~~---ii~i-P~g~-gphgi~~spdg~t~YV~~~~~~~v~~  142 (441)
T d1qnia2          91 KANTRVARIRLDIMKTDK---ITHI-PNVQ-AIHGLRLQKVPKTNYVFCNAEFVIPQ  142 (441)
T ss_dssp             TTTTEEEEEETTTTEEEE---EEEC-TTCC-CEEEEEECCSSBCCEEEEEECSCEES
T ss_pred             CCCCEEEEEECCCCcEee---EEec-CCCC-CccceEEeccCCEEEEEeccCCcccc
Confidence            789999999999876432   1122 3344 78999999976655566655555543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.61  E-value=0.00084  Score=52.49  Aligned_cols=100  Identities=7%  Similarity=-0.035  Sum_probs=58.8

Q ss_pred             ecCCcEEEEECCC-CCeEEE--e---ecCCCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccccceeeeee----
Q psy6415           6 YDNGDLKMFDLKT-MSLKWE--T---NLKNGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHREKGFAYLSE----   74 (174)
Q Consensus         6 s~Dg~iklWDl~~-~~~~~~--~---~~~~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~~~~~~~~~----   74 (174)
                      .....|.+|+... +.+...  .   ....+.+.++|+|++   +++ ++...+++|.+||+..............    
T Consensus       164 ~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg---~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~  240 (365)
T d1jofa_         164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG---NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP  240 (365)
T ss_dssp             TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred             CCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCC---ceEEEeccCCCEEEEEEecCCCceEEEEeeeecccc
Confidence            3355777777543 333221  1   124678999999975   655 6677899999999976542111111110    


Q ss_pred             ----------cccCcCcEEEEEEcCCCCCEEEEEcCCCc-----EEEEec
Q psy6415          75 ----------KAHKATTVWAAKHLPQNRDLFVTCGGSGS-----LNLWQL  109 (174)
Q Consensus        75 ----------~~h~~~~i~~v~fsP~~~~~las~s~Dg~-----V~lWd~  109 (174)
                                ..+.. ....+.++|++..++++...+..     |..|++
T Consensus       241 ~~~~~~~~~~~~~~~-~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~  289 (365)
T d1jofa_         241 PGIPDRDPETGKGLY-RADVCALTFSGKYMFASSRANKFELQGYIAGFKL  289 (365)
T ss_dssp             TTCCCBCTTTSSBSE-EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred             ccccccccccccccC-CccceEECCCCCEEEEEcccCCCccceEEEEEEe
Confidence                      01122 34578999976666666554444     666666

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.0011  Score=48.28  Aligned_cols=90  Identities=9%  Similarity=-0.034  Sum_probs=47.7

Q ss_pred             EEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEE-eCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcC
Q psy6415          11 LKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVAT-TLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLP   89 (174)
Q Consensus        11 iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~-s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP   89 (174)
                      |.+.++.++................|+|++   ..++.. ...+...+|.........     ....+.. .....+|||
T Consensus       153 i~~~~~~~~~~~~~~~~~~~~~~~~~spdg---~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~-~~~~p~~SP  223 (269)
T d2hqsa1         153 VYKVNINGGAPQRITWEGSQNQDADVSSDG---KFMVMVSSNGGQQHIAKQDLATGGV-----QVLSSTF-LDETPSLAP  223 (269)
T ss_dssp             EEEEETTSSCCEECCCSSSEEEEEEECTTS---SEEEEEEECSSCEEEEEEETTTCCE-----EECCCSS-SCEEEEECT
T ss_pred             Eeeeecccccceeeeccccccccccccccc---ceeEEEeecCCceeeeEeecccccc-----eEeecCc-cccceEECC
Confidence            334455554433333333446677899975   666655 445555555544322111     1113344 567889999


Q ss_pred             CCCCEEEEE--cCCCcEEEEec
Q psy6415          90 QNRDLFVTC--GGSGSLNLWQL  109 (174)
Q Consensus        90 ~~~~~las~--s~Dg~V~lWd~  109 (174)
                      ++..++.++  +....|.+|++
T Consensus       224 DG~~i~f~s~~~~~~~l~~~~~  245 (269)
T d2hqsa1         224 NGTMVIYSSSQGMGSVLNLVST  245 (269)
T ss_dssp             TSSEEEEEEEETTEEEEEEEET
T ss_pred             CCCEEEEEEcCCCCcEEEEEEC
Confidence            655443333  33446777777

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.0002  Score=58.38  Aligned_cols=94  Identities=5%  Similarity=0.037  Sum_probs=59.1

Q ss_pred             cCCcEEEEECCCCCeEEEeec----CCCEEEEEecCCCCCCCEEEEE---------eCCCcEEEEECCCcccccceeeee
Q psy6415           7 DNGDLKMFDLKTMSLKWETNL----KNGVCGVDFDRRDIPMNKLVAT---------TLEAKLFVFDLKTLHREKGFAYLS   73 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~~~----~~~V~sv~f~~~~~~~~~l~s~---------s~Dg~I~iWD~~~~~~~~~~~~~~   73 (174)
                      .||.|.+||+.+++.......    ...+.+..|+|++   +.++.+         |..+.+.|+|+.+++..   .+..
T Consensus        35 ~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~---~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~---~l~~  108 (465)
T d1xfda1          35 QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR---EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ---SLDP  108 (465)
T ss_dssp             SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS---SEEEEEESCCCCSSSCCCSEEEEEESSSCCCE---ECCC
T ss_pred             CCCcEEEEECCCCCEEEEEcCccccccccceeEECCCC---CeEEEEEcccceeEeeccccEEEEEccCCcee---eccC
Confidence            578999999988875433221    2356677899974   776665         34678899999886532   1111


Q ss_pred             ecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          74 EKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        74 ~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...... .+....|||++.. +|=.. ++.|.+.+.
T Consensus       109 ~~~~~~-~l~~~~wSPDG~~-iafv~-~~nl~~~~~  141 (465)
T d1xfda1         109 PEVSNA-KLQYAGWGPKGQQ-LIFIF-ENNIYYCAH  141 (465)
T ss_dssp             TTCCSC-CCSBCCBCSSTTC-EEEEE-TTEEEEESS
T ss_pred             ccCCcc-ccceeeeccCCce-EEEEe-cceEEEEec
Confidence            122233 4556789997655 44433 566777776

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.45  E-value=0.0016  Score=49.25  Aligned_cols=102  Identities=12%  Similarity=0.142  Sum_probs=70.0

Q ss_pred             EEEEecCCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           2 VVAGYDNGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         2 lasgs~Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      +++...+++|..||..+ ...........+++++|+|++   +.+++...++.+.+|+......... .+.. ..... .
T Consensus        42 ~vt~~~~~~I~~i~p~g-~~~~~~~~~~~~~gla~~~dG---~l~v~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-~  114 (302)
T d2p4oa1          42 FVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNG---DLVATGWNADSIPVVSLVKSDGTVE-TLLT-LPDAI-F  114 (302)
T ss_dssp             EEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTS---CEEEEEECTTSCEEEEEECTTSCEE-EEEE-CTTCS-C
T ss_pred             EEEeCCCCEEEEEeCCC-CEEEEEcCCCCcceEEEcCCC---CeEEEecCCceEEEEEeccccccee-eccc-cCCcc-c
Confidence            55666777777777654 333334456779999999974   8888888899999998765432111 1111 12334 6


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEeccc
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQLVS  111 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~~~  111 (174)
                      .+.+++.| ++.++++.+.++.|..++...
T Consensus       115 ~n~i~~~~-~g~~~v~~~~~~~i~~~~~~~  143 (302)
T d2p4oa1         115 LNGITPLS-DTQYLTADSYRGAIWLIDVVQ  143 (302)
T ss_dssp             EEEEEESS-SSEEEEEETTTTEEEEEETTT
T ss_pred             cceeEEcc-CCCEEeeccccccceeeeccC
Confidence            88999999 567889889888888887643

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.43  E-value=0.00089  Score=52.36  Aligned_cols=76  Identities=12%  Similarity=0.135  Sum_probs=50.7

Q ss_pred             CEEEEEecCCCCCCCEEEEEe-CCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          30 GVCGVDFDRRDIPMNKLVATT-LEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        30 ~V~sv~f~~~~~~~~~l~s~s-~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      .+.+++|+|++   ++++++. ....|.+|+......+............. ....++|+|+++.++++.-.+++|.+|+
T Consensus       146 h~h~v~~sPdG---~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~-gPr~i~f~pdg~~~yv~~e~~~~V~v~~  221 (365)
T d1jofa_         146 GIHGMVFDPTE---TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD-HPRWVAMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             CEEEEEECTTS---SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC-CEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             cceEEEECCCC---CEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCC-ceEEEEECCCCceEEEeccCCCEEEEEE
Confidence            47899999975   7776654 45578888865432111000001112223 5789999998777778888999999999


Q ss_pred             c
Q psy6415         109 L  109 (174)
Q Consensus       109 ~  109 (174)
                      +
T Consensus       222 ~  222 (365)
T d1jofa_         222 I  222 (365)
T ss_dssp             E
T ss_pred             e
Confidence            9

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.39  E-value=0.0018  Score=48.89  Aligned_cols=69  Identities=10%  Similarity=0.006  Sum_probs=53.4

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      ..+..++++|++   +++++...+++|..||.....       ..+..... .++.++|.|+ +.++++...++.+..|+
T Consensus        28 ~~~e~iAv~pdG---~l~vt~~~~~~I~~i~p~g~~-------~~~~~~~~-~~~gla~~~d-G~l~v~~~~~~~~~~~~   95 (302)
T d2p4oa1          28 TFLENLASAPDG---TIFVTNHEVGEIVSITPDGNQ-------QIHATVEG-KVSGLAFTSN-GDLVATGWNADSIPVVS   95 (302)
T ss_dssp             CCEEEEEECTTS---CEEEEETTTTEEEEECTTCCE-------EEEEECSS-EEEEEEECTT-SCEEEEEECTTSCEEEE
T ss_pred             CCcCCEEECCCC---CEEEEeCCCCEEEEEeCCCCE-------EEEEcCCC-CcceEEEcCC-CCeEEEecCCceEEEEE
Confidence            457889999974   888999999999999866532       11223445 7899999995 56889888888998888


Q ss_pred             c
Q psy6415         109 L  109 (174)
Q Consensus       109 ~  109 (174)
                      .
T Consensus        96 ~   96 (302)
T d2p4oa1          96 L   96 (302)
T ss_dssp             E
T ss_pred             e
Confidence            7

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.047  Score=39.07  Aligned_cols=90  Identities=18%  Similarity=0.167  Sum_probs=59.3

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCC---cEEEEECCCcccccceeeeeecccCcCcEEEEE
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEA---KLFVFDLKTLHREKGFAYLSEKAHKATTVWAAK   86 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg---~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~   86 (174)
                      .|.|-|...............+.+-+|||++   +.||-.+...   .+.+.+..+...      ..+..+.. ......
T Consensus        20 ~l~i~d~dG~~~~~l~~~~~~~~sP~wSPDG---k~IAf~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~   89 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG---SKLAYVTFESGRSALVIQTLANGAV------RQVASFPR-HNGAPA   89 (269)
T ss_dssp             EEEEEETTSCSCEEEEEESSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCE------EEEECCSS-CEEEEE
T ss_pred             EEEEEcCCCCCcEEEecCCCceeeeEECCCC---CEEEEEEeeccCcceeeeecccCce------eEEeeeec-ccccce
Confidence            4777788877766656667889999999985   8888654333   355556555432      12234555 788899


Q ss_pred             EcCCCCCEEEEEcCCCcEEEEec
Q psy6415          87 HLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        87 fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      |+|++..++.....++...++..
T Consensus        90 ~spdg~~i~~~~~~~~~~~~~~~  112 (269)
T d2hqsa1          90 FSPDGSKLAFALSKTGSLNLYVM  112 (269)
T ss_dssp             ECTTSSEEEEEECTTSSCEEEEE
T ss_pred             ecCCCCeeeEeeecCCccceeec
Confidence            99976655555555666555555

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=96.61  E-value=0.019  Score=43.60  Aligned_cols=70  Identities=21%  Similarity=0.204  Sum_probs=52.0

Q ss_pred             EEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          31 VCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        31 V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      ...++++++   ++..++....+.|.+||.++.....     .+..... ...+++|.|+...+++|.+.+|+|.-.++
T Consensus       228 pdGiavD~~---GnlyVa~~~~g~I~~~dp~~g~~~~-----~i~~p~~-~~t~~afg~d~~~lyVt~~~~g~i~~~~~  297 (314)
T d1pjxa_         228 ADGMDFDED---NNLLVANWGSSHIEVFGPDGGQPKM-----RIRCPFE-KPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             EEEEEEBTT---CCEEEEEETTTEEEEECTTCBSCSE-----EEECSSS-CEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             ceeeEEecC---CcEEEEEcCCCEEEEEeCCCCEEEE-----EEECCCC-CEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence            457888876   4888888888999999988754321     2223334 57899999966568999999998877777

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.56  E-value=0.051  Score=40.02  Aligned_cols=70  Identities=7%  Similarity=0.048  Sum_probs=48.4

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee--cccCcCcEEEEEEcCCCCCEEEEEc-CCCcEE
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE--KAHKATTVWAAKHLPQNRDLFVTCG-GSGSLN  105 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~--~~h~~~~i~~v~fsP~~~~~las~s-~Dg~V~  105 (174)
                      .....++++++   ++.+++....+.|++||.....      +.++  .++-. ....|++.|++ +++++-+ .++.|.
T Consensus       157 ~~~~~i~~d~~---g~i~v~d~~~~~V~~~d~~G~~------~~~~g~~g~~~-~P~giavD~~G-~i~Vad~~~~~~v~  225 (279)
T d1q7fa_         157 EFPNGVVVNDK---QEIFISDNRAHCVKVFNYEGQY------LRQIGGEGITN-YPIGVGINSNG-EILIADNHNNFNLT  225 (279)
T ss_dssp             SSEEEEEECSS---SEEEEEEGGGTEEEEEETTCCE------EEEESCTTTSC-SEEEEEECTTC-CEEEEECSSSCEEE
T ss_pred             cccceeeeccc---eeEEeeeccccceeeeecCCce------eeeeccccccc-CCcccccccCC-eEEEEECCCCcEEE
Confidence            45678888876   3778888889999999976531      1122  23333 56789999954 6777654 456799


Q ss_pred             EEec
Q psy6415         106 LWQL  109 (174)
Q Consensus       106 lWd~  109 (174)
                      +|+.
T Consensus       226 ~f~~  229 (279)
T d1q7fa_         226 IFTQ  229 (279)
T ss_dssp             EECT
T ss_pred             EECC
Confidence            9887

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.53  E-value=0.053  Score=39.90  Aligned_cols=94  Identities=10%  Similarity=0.144  Sum_probs=59.8

Q ss_pred             ecCCcEEEEECCCCCeEEEee--cCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEE
Q psy6415           6 YDNGDLKMFDLKTMSLKWETN--LKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVW   83 (174)
Q Consensus         6 s~Dg~iklWDl~~~~~~~~~~--~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~   83 (174)
                      +.++.|..++.. +.......  .......++++++   ++.+++....+.+.++|.... .+..+   ....+.. ..+
T Consensus        90 ~~~~~i~~~~~~-g~~~~~~~~~~~~~p~~~avd~~---G~i~v~~~~~~~~~~~~~~g~-~~~~~---g~~~~~~-~~~  160 (279)
T d1q7fa_          90 SPTHQIQIYNQY-GQFVRKFGATILQHPRGVTVDNK---GRIIVVECKVMRVIIFDQNGN-VLHKF---GCSKHLE-FPN  160 (279)
T ss_dssp             GGGCEEEEECTT-SCEEEEECTTTCSCEEEEEECTT---SCEEEEETTTTEEEEECTTSC-EEEEE---ECTTTCS-SEE
T ss_pred             CCcccccccccc-ccceeecCCCcccccceeccccC---CcEEEEeeccceeeEeccCCc-eeecc---ccccccc-ccc
Confidence            344566666654 33332322  2345678888875   367777777777888886542 11111   1123445 678


Q ss_pred             EEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          84 AAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        84 ~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .+++.+ ++.++++....+.|++||.
T Consensus       161 ~i~~d~-~g~i~v~d~~~~~V~~~d~  185 (279)
T d1q7fa_         161 GVVVND-KQEIFISDNRAHCVKVFNY  185 (279)
T ss_dssp             EEEECS-SSEEEEEEGGGTEEEEEET
T ss_pred             eeeecc-ceeEEeeeccccceeeeec
Confidence            899998 4578899999999999998

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=96.35  E-value=0.046  Score=41.32  Aligned_cols=78  Identities=17%  Similarity=0.162  Sum_probs=46.5

Q ss_pred             CEEEEEecCCCCC-C-CEEEEEeCCCcEEEEECCCccccccee-eeeecc-cCcCcEEEEEEcCCCCCEEEEEcCCCcEE
Q psy6415          30 GVCGVDFDRRDIP-M-NKLVATTLEAKLFVFDLKTLHREKGFA-YLSEKA-HKATTVWAAKHLPQNRDLFVTCGGSGSLN  105 (174)
Q Consensus        30 ~V~sv~f~~~~~~-~-~~l~s~s~Dg~I~iWD~~~~~~~~~~~-~~~~~~-h~~~~i~~v~fsP~~~~~las~s~Dg~V~  105 (174)
                      .-+.|+|+|++.. . ..+++-+..+.|..||+.....+.... ...+.+ +.. ..-.+++-+ +++++++....+.|.
T Consensus       173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~pdGiavD~-~GnlyVa~~~~g~I~  250 (314)
T d1pjxa_         173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG-GADGMDFDE-DNNLLVANWGSSHIE  250 (314)
T ss_dssp             SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC-EEEEEEEBT-TCCEEEEEETTTEEE
T ss_pred             eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccc-cceeeEEec-CCcEEEEEcCCCEEE
Confidence            3467889875310 0 134556788899999986532221111 111111 122 345788888 467888887888999


Q ss_pred             EEec
Q psy6415         106 LWQL  109 (174)
Q Consensus       106 lWd~  109 (174)
                      .||-
T Consensus       251 ~~dp  254 (314)
T d1pjxa_         251 VFGP  254 (314)
T ss_dssp             EECT
T ss_pred             EEeC
Confidence            9987

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.15  E-value=0.043  Score=39.98  Aligned_cols=72  Identities=11%  Similarity=0.013  Sum_probs=48.1

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEe
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQ  108 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd  108 (174)
                      ...++|++++++   +.+++-.....+..++.......    .....+ -. ....+++.|+ +.++++...++.|..+|
T Consensus        98 ~~p~~iavd~~g---~i~v~d~~~~~~~~~~~~~~~~~----~~~~~~-~~-~p~~i~~~~~-g~~~v~~~~~~~i~~~d  167 (260)
T d1rwia_          98 NYPEGLAVDTQG---AVYVADRGNNRVVKLAAGSKTQT----VLPFTG-LN-DPDGVAVDNS-GNVYVTDTDNNRVVKLE  167 (260)
T ss_dssp             CSEEEEEECTTC---CEEEEEGGGTEEEEECTTCSSCE----ECCCCS-CC-SCCEEEECTT-CCEEEEEGGGTEEEEEC
T ss_pred             eecccccccccc---eeEeeccccccccccccccceee----eeeecc-cC-CcceeeecCC-CCEeeeccccccccccc
Confidence            457889998863   67776666777777776553211    111111 12 3468899994 56888888899999999


Q ss_pred             cc
Q psy6415         109 LV  110 (174)
Q Consensus       109 ~~  110 (174)
                      .+
T Consensus       168 ~~  169 (260)
T d1rwia_         168 AE  169 (260)
T ss_dssp             TT
T ss_pred             cc
Confidence            83

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.06  E-value=0.014  Score=42.11  Aligned_cols=45  Identities=13%  Similarity=0.209  Sum_probs=29.1

Q ss_pred             CCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEE
Q psy6415          43 MNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFV   96 (174)
Q Consensus        43 ~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~la   96 (174)
                      ++.+|-.+. +.|.+.|+.+.+..      .+..+.. .+...+|||++ ..||
T Consensus        12 G~~v~f~~~-~dl~~~d~~~g~~~------~Lt~~~~-~~~~p~~SPDG-~~ia   56 (281)
T d1k32a2          12 GDRIIFVCC-DDLWEHDLKSGSTR------KIVSNLG-VINNARFFPDG-RKIA   56 (281)
T ss_dssp             TTEEEEEET-TEEEEEETTTCCEE------EEECSSS-EEEEEEECTTS-SEEE
T ss_pred             CCEEEEEeC-CcEEEEECCCCCEE------EEecCCC-cccCEEECCCC-CEEE
Confidence            367775543 45777799876532      2234555 78889999965 4455

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=96.04  E-value=0.1  Score=39.18  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=47.8

Q ss_pred             CCEEEEEecCCCCCCCEE-EEEeCCCcEEEEECCCcccc-cce--eeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcE
Q psy6415          29 NGVCGVDFDRRDIPMNKL-VATTLEAKLFVFDLKTLHRE-KGF--AYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSL  104 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l-~s~s~Dg~I~iWD~~~~~~~-~~~--~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V  104 (174)
                      ..-+.|+|+|++   +.| ++-+..+.|..||+...... ...  .......... .--.+++.+ +++++++....+.|
T Consensus       177 ~~pnGia~s~dg---~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~-~PdGl~vD~-~G~l~Va~~~~g~V  251 (319)
T d2dg1a1         177 SVANGIALSTDE---KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHE-GPDSCCIDS-DDNLYVAMYGQGRV  251 (319)
T ss_dssp             SSEEEEEECTTS---SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSS-EEEEEEEBT-TCCEEEEEETTTEE
T ss_pred             ceeeeeeecccc---ceEEEecccCCceEEEEEcCCCceeccccceeeeccCCcc-ceeeeeEcC-CCCEEEEEcCCCEE
Confidence            345789999974   655 66678899999998753211 000  0000001111 234688888 46788888889999


Q ss_pred             EEEec
Q psy6415         105 NLWQL  109 (174)
Q Consensus       105 ~lWd~  109 (174)
                      ..+|-
T Consensus       252 ~~~~p  256 (319)
T d2dg1a1         252 LVFNK  256 (319)
T ss_dssp             EEECT
T ss_pred             EEECC
Confidence            99887

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.59  E-value=0.052  Score=38.82  Aligned_cols=85  Identities=14%  Similarity=0.075  Sum_probs=49.9

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEe-CCC-----cEEEEECCCcccccce-eeeeecccCcC
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATT-LEA-----KLFVFDLKTLHREKGF-AYLSEKAHKAT   80 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s-~Dg-----~I~iWD~~~~~~~~~~-~~~~~~~h~~~   80 (174)
                      +|.|.+.|+.+++..........+...+|||++   +.||..+ .++     .|.+.+..+.+..+-. .......... 
T Consensus        20 ~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG---~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~-   95 (281)
T d1k32a2          20 CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDG---RKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRM-   95 (281)
T ss_dssp             TTEEEEEETTTCCEEEEECSSSEEEEEEECTTS---SEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEE-
T ss_pred             CCcEEEEECCCCCEEEEecCCCcccCEEECCCC---CEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccc-
Confidence            466777799998876555556678889999975   8887543 222     3667777665421100 0000001112 


Q ss_pred             cEEEEEEcCCCCCEEEE
Q psy6415          81 TVWAAKHLPQNRDLFVT   97 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las   97 (174)
                      .....+|+|++ ..++.
T Consensus        96 ~~~~~~~spdg-~~l~~  111 (281)
T d1k32a2          96 FTDVAGFDPDG-NLIIS  111 (281)
T ss_dssp             CSEEEEECTTC-CEEEE
T ss_pred             cccccccCCCC-CEEEE
Confidence            45678899965 44444

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=95.42  E-value=0.34  Score=36.18  Aligned_cols=85  Identities=8%  Similarity=0.055  Sum_probs=42.3

Q ss_pred             cCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCC--Cc--EEEEECCCcccccceeeeeecccCcCc
Q psy6415           7 DNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLE--AK--LFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         7 ~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~D--g~--I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      .++.|.-||..++...... ........|+|++++   +.+++...+  ..  |...|..+.....   ......-.. .
T Consensus        59 ~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG---~l~va~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~-~  131 (319)
T d2dg1a1          59 FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATENGDNLQD---IIEDLSTAY-C  131 (319)
T ss_dssp             TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS---CEEEEECTTSSSCCEEEEECTTSCSCEE---EECSSSSCC-C
T ss_pred             CCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCC---CEEEEecCCCccceeEEEEcCCCceeee---eccCCCccc-C
Confidence            3455555555554433222 234567889999864   666665332  23  4444444322110   000001112 4


Q ss_pred             EEEEEEcCCCCCEEEEEc
Q psy6415          82 VWAAKHLPQNRDLFVTCG   99 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s   99 (174)
                      .+.+++.|+ +.++++..
T Consensus       132 ~nd~~~d~~-G~l~vtd~  148 (319)
T d2dg1a1         132 IDDMVFDSK-GGFYFTDF  148 (319)
T ss_dssp             EEEEEECTT-SCEEEEEC
T ss_pred             CcceeEEec-cceeeccc
Confidence            788899995 56767643

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.14  E-value=0.2  Score=36.19  Aligned_cols=97  Identities=12%  Similarity=0.058  Sum_probs=62.5

Q ss_pred             EEEecCCcEEEEECCCCCeEEEe-ecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCc
Q psy6415           3 VAGYDNGDLKMFDLKTMSLKWET-NLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATT   81 (174)
Q Consensus         3 asgs~Dg~iklWDl~~~~~~~~~-~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~   81 (174)
                      ++...++.|..+|.++....... ..-.....|++++++   +.+++....+.|..++.......    ... ...-. .
T Consensus       155 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g---~l~vsd~~~~~i~~~~~~~~~~~----~~~-~~~~~-~  225 (260)
T d1rwia_         155 VTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG---TVYVTEHNTNQVVKLLAGSTTST----VLP-FTGLN-T  225 (260)
T ss_dssp             EEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC---CEEEEETTTTEEEEECTTCSCCE----ECC-CCSCC-C
T ss_pred             eeccccccccccccccceeeeeeccccCCCccceeeeee---eeeeeecCCCEEEEEeCCCCeEE----EEc-cCCCC-C
Confidence            44556677888887765443322 223457889999864   77778888888888887653211    111 11112 3


Q ss_pred             EEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          82 VWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        82 i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      -..+++.++ +.++++-..+++|+..+.
T Consensus       226 P~~i~~d~~-g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         226 PLAVAVDSD-RTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             EEEEEECTT-CCEEEEEGGGTEEEEECC
T ss_pred             eEEEEEeCC-CCEEEEECCCCEEEEEeC
Confidence            578999995 578888888887776655

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.017  Score=46.39  Aligned_cols=68  Identities=6%  Similarity=0.021  Sum_probs=39.2

Q ss_pred             EecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEE--------cCCCcEEE
Q psy6415          35 DFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTC--------GGSGSLNL  106 (174)
Q Consensus        35 ~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~--------s~Dg~V~l  106 (174)
                      .|.++    ..++.-..||.|.+||+.+++...-+...++  ..- .+.+..|||++..++...        +..+.+.+
T Consensus        23 ~W~~~----~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~--~~~-~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i   95 (465)
T d1xfda1          23 KWISD----TEFIYREQKGTVRLWNVETNTSTVLIEGKKI--ESL-RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL   95 (465)
T ss_dssp             CBSSS----SCBCCCCSSSCEEEBCGGGCCCEEEECTTTT--TTT-TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             EEeCC----CcEEEEeCCCcEEEEECCCCCEEEEEcCccc--ccc-ccceeEECCCCCeEEEEEcccceeEeeccccEEE
Confidence            46654    2344556788999999987653210100111  122 456778999665544433        34567778


Q ss_pred             Eec
Q psy6415         107 WQL  109 (174)
Q Consensus       107 Wd~  109 (174)
                      +|+
T Consensus        96 ~d~   98 (465)
T d1xfda1          96 SKI   98 (465)
T ss_dssp             EES
T ss_pred             EEc
Confidence            888

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.08  E-value=0.75  Score=33.86  Aligned_cols=95  Identities=13%  Similarity=-0.012  Sum_probs=59.8

Q ss_pred             EEecCCcEEEEECCCCCeEEEeec-----CCCEEEEEecCCCCCCCEEEEEeC----CCcEEEEECCCcccccceeeeee
Q psy6415           4 AGYDNGDLKMFDLKTMSLKWETNL-----KNGVCGVDFDRRDIPMNKLVATTL----EAKLFVFDLKTLHREKGFAYLSE   74 (174)
Q Consensus         4 sgs~Dg~iklWDl~~~~~~~~~~~-----~~~V~sv~f~~~~~~~~~l~s~s~----Dg~I~iWD~~~~~~~~~~~~~~~   74 (174)
                      .|+.+ -|.++|..+++.......     ...++.+.++|++   +..++...    .+.-.+|.+...+...     ..
T Consensus        74 va~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G---~iw~~~~~~~~~~~~g~l~~~~~g~~~~-----~~  144 (295)
T d2ghsa1          74 IASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG---ALWIGTMGRKAETGAGSIYHVAKGKVTK-----LF  144 (295)
T ss_dssp             EEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS---CEEEEEEETTCCTTCEEEEEEETTEEEE-----EE
T ss_pred             EEEeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCC---CEEEEeccccccccceeEeeecCCcEEE-----Ee
Confidence            34554 488899998886543321     1247888999864   65555432    2344566665543211     11


Q ss_pred             cccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          75 KAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        75 ~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .. -. .-+.++|+|++..++++-+..+.|..+++
T Consensus       145 ~~-~~-~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~  177 (295)
T d2ghsa1         145 AD-IS-IPNSICFSPDGTTGYFVDTKVNRLMRVPL  177 (295)
T ss_dssp             EE-ES-SEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred             ec-cC-CcceeeecCCCceEEEeecccceeeEeee
Confidence            11 12 45789999977778888899999999988

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.45  E-value=1.9  Score=31.56  Aligned_cols=92  Identities=9%  Similarity=0.055  Sum_probs=52.5

Q ss_pred             EEECCCCCeEEEeecCCCEEEEEecCCCCCCC-EEEEEeCCCcEEEEECCCcccc---cceeeeeecccCcCcEEEEEEc
Q psy6415          13 MFDLKTMSLKWETNLKNGVCGVDFDRRDIPMN-KLVATTLEAKLFVFDLKTLHRE---KGFAYLSEKAHKATTVWAAKHL   88 (174)
Q Consensus        13 lWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~-~l~s~s~Dg~I~iWD~~~~~~~---~~~~~~~~~~h~~~~i~~v~fs   88 (174)
                      +|.+..++..........-+.++|++++   + .+++-+..+.|..+|+......   .......+.+-.. ....+++-
T Consensus       132 l~~~~~g~~~~~~~~~~~~Ng~~~s~d~---~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g-~pdG~~vD  207 (295)
T d2ghsa1         132 IYHVAKGKVTKLFADISIPNSICFSPDG---TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG-GMDGSVCD  207 (295)
T ss_dssp             EEEEETTEEEEEEEEESSEEEEEECTTS---CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS-EEEEEEEC
T ss_pred             EeeecCCcEEEEeeccCCcceeeecCCC---ceEEEeecccceeeEeeecccccccccceEEEeccCcccc-cccceEEc
Confidence            4444444433222222345788999874   4 4567788899999987542211   0111111222233 45677887


Q ss_pred             CCCCCEEEEEcCCCcEEEEec
Q psy6415          89 PQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        89 P~~~~~las~s~Dg~V~lWd~  109 (174)
                      + ++++.++.-..|.|..||-
T Consensus       208 ~-~GnlWva~~~~g~V~~~dp  227 (295)
T d2ghsa1         208 A-EGHIWNARWGEGAVDRYDT  227 (295)
T ss_dssp             T-TSCEEEEEETTTEEEEECT
T ss_pred             C-CCCEEeeeeCCCceEEecC
Confidence            7 4567776666778888887

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.49  E-value=0.17  Score=41.47  Aligned_cols=54  Identities=19%  Similarity=0.186  Sum_probs=40.2

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEEE--EEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVCG--VDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~s--v~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      .|.|.-+|+.+|++++.......+.+  ++-.     +..+.+|+.||.++-+|.++++.+
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~lsta-----gglVF~Gt~dg~l~A~Da~TGe~L  520 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATA-----GNLVFTGTGDGYFKAFDAKSGKEL  520 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCeEEEEcCCCCcEEeecCCCCCCccceeEEc-----CCeEEEeCCCCeEEEEECCCCcEe
Confidence            47899999999999887654333221  2221     367888999999999999998765

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=89.75  E-value=0.54  Score=38.17  Aligned_cols=54  Identities=11%  Similarity=0.126  Sum_probs=39.3

Q ss_pred             CCcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           8 NGDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         8 Dg~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      .|.|.-||+.++++++.........  .|+-.     +.++.+|+.||.++-+|.++++.+
T Consensus       437 ~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~Ta-----gglVF~G~~dg~l~A~Da~tGe~L  492 (560)
T d1kv9a2         437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTA-----GNLVFQGTAAGQMHAYSADKGEAL  492 (560)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccceEEEeCCCCeEeeeccCCCCCCCceeEEC-----CCEEEEECCCCcEEEEECCCCcEe
Confidence            3678899999999988765432221  12222     367888999999999999998754

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.51  E-value=0.24  Score=40.56  Aligned_cols=53  Identities=25%  Similarity=0.218  Sum_probs=38.7

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      |.|.-+|+++|+.++.........  .|+-.     +..+++|+.|+.++-+|.++++.+
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~Ta-----gglVf~G~~dg~l~A~Da~tGe~l  498 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTK-----GGLVWYATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccEEEeccCCCceeeEcCCCCCCCcceeEec-----CCEEEEECCCCeEEEEECCCCcEE
Confidence            679999999999988765432211  12211     368888999999999999998754

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=89.18  E-value=0.26  Score=40.62  Aligned_cols=55  Identities=24%  Similarity=0.218  Sum_probs=39.0

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      |.|.-||+.++++++.......+.+=...-.   +..+.+|+.||.++-+|.++++.+
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTa---gglVF~G~~Dg~l~A~Da~TGe~L  507 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWGGTMATA---GDLVFYGTLDGYLKARDSDTGDLL  507 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEET---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ceEEEEeCCCCceecccCCCCCCccceeEec---CCEEEEECCCCeEEEEECCCCcEe
Confidence            6799999999999887554332221111111   367788999999999999998754

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=89.02  E-value=0.62  Score=37.87  Aligned_cols=53  Identities=15%  Similarity=0.176  Sum_probs=39.3

Q ss_pred             CcEEEEECCCCCeEEEeecCCCEE--EEEecCCCCCCCEEEEEeCCCcEEEEECCCcccc
Q psy6415           9 GDLKMFDLKTMSLKWETNLKNGVC--GVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHRE   66 (174)
Q Consensus         9 g~iklWDl~~~~~~~~~~~~~~V~--sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~   66 (174)
                      |+|.-||+.+++.++.........  .++-.     +..+.+|+.|+.++.+|.++++.+
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lsta-----gglVF~G~~dg~l~A~Da~TGe~L  511 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTA-----GNVVFQGTADGRLVAYHAATGEKL  511 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEET-----TTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCCceEEEc-----CCEEEEECCCCeEEEEECCCCcEe
Confidence            578899999999988765432211  23322     368888999999999999998755

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=88.75  E-value=1.7  Score=34.51  Aligned_cols=94  Identities=13%  Similarity=0.130  Sum_probs=60.1

Q ss_pred             cEEEEECCCCCeEEEeecCCCEEEEEecCCCCCCCEEEEEeCC-------------------------------------
Q psy6415          10 DLKMFDLKTMSLKWETNLKNGVCGVDFDRRDIPMNKLVATTLE-------------------------------------   52 (174)
Q Consensus        10 ~iklWDl~~~~~~~~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-------------------------------------   52 (174)
                      .+...|..+.+..+..........+++++++   .++++.+.+                                     
T Consensus       174 ~~t~ID~~tm~V~~QV~V~g~ld~~~~s~dG---K~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~e  250 (459)
T d1fwxa2         174 VFTAVDADKWEVAWQVLVSGNLDNCDADYEG---KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE  250 (459)
T ss_dssp             EEEEEETTTTEEEEEEEESSCCCCEEECSSS---SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred             EEEEEecCCceEEEEeeeCCChhccccCCCC---CEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEE
Confidence            4667899888887766555566678899874   777766543                                     


Q ss_pred             -CcEEEEECCCcccccceeeeeecccCcCcEEEEEEcCCCCCEEEEEcCCCcEEEEecc
Q psy6415          53 -AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAAKHLPQNRDLFVTCGGSGSLNLWQLV  110 (174)
Q Consensus        53 -g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v~fsP~~~~~las~s~Dg~V~lWd~~  110 (174)
                       +.+++-|.+..... .+ +..+...+  .-+.|.++|++..+++++..+.+|.+.|++
T Consensus       251 ingV~VVD~~~~~~~-~v-~~yIPVpK--sPHGV~vSPDGKyi~VaGKLs~tVSViD~~  305 (459)
T d1fwxa2         251 LNGVKVVDGRKEASS-LF-TRYIPIAN--NPHGCNMAPDKKHLCVAGKLSPTVTVLDVT  305 (459)
T ss_dssp             ETTEEEEECSGG--C-SS-EEEEEEES--SCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred             eCCceeecccccCCc-ce-eEEEecCC--CCCceEECCCCCEEEEeCCcCCcEEEEEeh
Confidence             22344444432110 00 11111111  235788999888899999999999999994

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=88.53  E-value=3  Score=30.63  Aligned_cols=92  Identities=12%  Similarity=0.025  Sum_probs=52.2

Q ss_pred             EEEEECCCCCeEE----EeecCCCEEEEEecCCCCCCCEEEEEeCC-CcEEEEECCCcccccceeeeeecccCcCcEEEE
Q psy6415          11 LKMFDLKTMSLKW----ETNLKNGVCGVDFDRRDIPMNKLVATTLE-AKLFVFDLKTLHREKGFAYLSEKAHKATTVWAA   85 (174)
Q Consensus        11 iklWDl~~~~~~~----~~~~~~~V~sv~f~~~~~~~~~l~s~s~D-g~I~iWD~~~~~~~~~~~~~~~~~h~~~~i~~v   85 (174)
                      +.+||+.+++-..    ...+..-..+.++.++   +..++.|+.+ ..+.+||..+..-..   ...+... . .-.++
T Consensus        54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~---g~i~v~Gg~~~~~~~~yd~~~~~w~~---~~~~~~~-r-~~~~~  125 (387)
T d1k3ia3          54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN---GQIVVTGGNDAKKTSLYDSSSDSWIP---GPDMQVA-R-GYQSS  125 (387)
T ss_dssp             EEEECTTTCCBCCCEEEECSCCCSSCEEEECTT---SCEEEECSSSTTCEEEEEGGGTEEEE---CCCCSSC-C-SSCEE
T ss_pred             EEEEECCCCcEeecCCCCCCcccceeEEEEecC---CcEEEeecCCCcceeEecCccCcccc---ccccccc-c-cccce
Confidence            6689998775321    1111122234566665   3777777654 689999998754321   0111111 1 12345


Q ss_pred             EEcCCCCCEEEEEcCC------CcEEEEeccc
Q psy6415          86 KHLPQNRDLFVTCGGS------GSLNLWQLVS  111 (174)
Q Consensus        86 ~fsP~~~~~las~s~D------g~V~lWd~~~  111 (174)
                      +..+ ++.+++.|+.+      ..+.+||..+
T Consensus       126 ~~~~-dG~v~v~GG~~~~~~~~~~v~~yd~~~  156 (387)
T d1k3ia3         126 ATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSS  156 (387)
T ss_dssp             EECT-TSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred             eeec-CCceeeeccccccccccceeeeecCCC
Confidence            5667 56788888753      3688999844

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=81.71  E-value=2.3  Score=33.25  Aligned_cols=28  Identities=14%  Similarity=0.120  Sum_probs=23.4

Q ss_pred             cEEEEEEcCCCCCEEEEEcCCCcEEEEec
Q psy6415          81 TVWAAKHLPQNRDLFVTCGGSGSLNLWQL  109 (174)
Q Consensus        81 ~i~~v~fsP~~~~~las~s~Dg~V~lWd~  109 (174)
                      .-|+++|.|+ +.+|++--..|+|++++.
T Consensus        28 ~P~~la~~pd-g~llVter~~G~i~~v~~   55 (450)
T d1crua_          28 KPHALLWGPD-NQIWLTERATGKILRVNP   55 (450)
T ss_dssp             SEEEEEECTT-SCEEEEETTTCEEEEECT
T ss_pred             CceEEEEeCC-CeEEEEEecCCEEEEEEC
Confidence            5689999994 678888777899999887

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=81.45  E-value=6.2  Score=30.65  Aligned_cols=55  Identities=5%  Similarity=0.050  Sum_probs=35.3

Q ss_pred             CCEEEEEecCCCCCCCEEEEEeCCCcEEEEECCCcccccceeeeee------cccCcCcEEEEEEcCC
Q psy6415          29 NGVCGVDFDRRDIPMNKLVATTLEAKLFVFDLKTLHREKGFAYLSE------KAHKATTVWAAKHLPQ   90 (174)
Q Consensus        29 ~~V~sv~f~~~~~~~~~l~s~s~Dg~I~iWD~~~~~~~~~~~~~~~------~~h~~~~i~~v~fsP~   90 (174)
                      ..-++|+|.|++   +.|++--..|.|++++..+.....   +..+      ..-+. ....|+|+|+
T Consensus        27 ~~P~~la~~pdg---~llVter~~G~i~~v~~~~g~~~~---i~~~~~~~~~~~ge~-GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDN---QIWLTERATGKILRVNPESGSVKT---VFQVPEIVNDADGQN-GLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEEE---EEECTTCCCCTTSSC-SEEEEEECTT
T ss_pred             CCceEEEEeCCC---eEEEEEecCCEEEEEECCCCcEee---cccCCccccccCCCC-ceeeEEeCCC
Confidence            456799999974   555554457999999887754221   1111      11133 6889999994