Psyllid ID: psy6562


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MRHLAMLALTFNNPIVQNPGSTHSTHFLKISLGGPYSDKEIGIQAKRNPKQVKSKMNPALPDHRKKSRNSGGKIPHPWSLARPINVPSKILDKHRKWSNINLDTRYYLILKTVEERDQGLGLQINTVSKKVGGIDESTVETSGNYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGFTEGNRQSLNQSQGTHFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQIAPTPKPQSGLFVYEVKLKRNCTYQWRSVHVGRVWRPYTQIPFNIGTTFNIGS
ccccccHHHHcccccccccccccccEEEEEEcccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccHHHHHHcccccccccccEEEEEEEHHHHccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccEEEccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEcccEEEccccEEEEEcccccccHHHHHcccccccccccccEEEEEccccEEEEEEccEEEEEEEEcccccccccccEEEccccccccccccccccccEEEEEEEEcccccEEEEEEEEEEEcccccccccccccEEEccc
ccHHHHHHHHcccccEccccccccccEEEEEcccccccHHHEEEEccccHHHcccccccccccccccccccccccccccccccccccHHHHHHHccccccccccHEEEEEHcHHHHHccccccHHHHHHHHcccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccccccccccEEEEEEccccHHHHHHHHHHHHHHccccEEEEEccEEEEccccEEEEEcccccccEEEcccccHHHHHHHcccccEEEEcccEEEEEccEEEEEEEEEEccccccEEEEEEEcccccHHHccccccccccEEEEEEEEccccEEEEEEEEEccEEccccEccEccccEEEccc
MRHLAMLALTfnnpivqnpgsthsthflkislggpysdkeigiqakrnpkqvkskmnpalpdhrkksrnsggkiphpwslarpinvpskildkhrkwsninlDTRYYLILKTVEErdqglglqintvskkvggidestvetsgnyidiDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVInrawvqshprQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVvnmdripdnssALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARfiiitpdngnglkgftegnrqslnqsqgthfaglklpslsicvlpyrlTFCLrfdyntnesylipirissthpleqiaptpkpqsglfVYEVKLKrnctyqwrsvhvgrvwrpytqipfnigttfnigs
MRHLAMLALTFNNPIVQNPGSTHSTHFLKISLGGPYSDKEIgiqakrnpkqvkskmnpalpdhrkksrnsggkiphpwslarpinvpskildkhrkwsninlDTRYYLILKTVEerdqglglqintvskkvggidestvetsgnyIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGFTEGNRQSLNQSQGTHFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQIAPTPKPQSGLFVYEVKLKRNCTYQwrsvhvgrvwrpytqipfnigttfnigs
MRHLAMLALTFNNPIVQNPGSTHSTHFLKISLGGPYSDKEIGIQAKRNPKQVKSKMNPALPDHRKKSRNSGGKIPHPWSLARPINVPSKILDKHRKWSNINLDTRYYLILKTVEERDQGLGLQINTVSKKVGGIDESTVETSGNYIDIDFTLWVSWlltplfitiflpliilSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGFTEGNRQSLNQSQGTHFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQIAPTPKPQSGLFVYEVKLKRNCTYQWRSVHVGRVWRPYTQIPFNIGTTFNIGS
*****MLALTFNNPIVQ*******THFLKISLG********************************************WSLARPINVPSKILDKHRKWSNINLDTRYYLILKTVEERDQGLGLQINTVSKKVGGIDESTVETSGNYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGF*************THFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQI*******SGLFVYEVKLKRNCTYQWRSVHVGRVWRPYTQIPFNIGTTFNI**
****AMLALTFNNPIVQNPGSTHSTHFLKISLGGPYSDKE*************************************WSLARPINVPSKILDKHRKWSNINLDTRYYLILKTVEERDQGLGLQINTVSKKVGGIDESTVETSGNYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGFTEGNRQSLNQSQGTHFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQIAPTPKPQSGLFVYEVKLKRNCTYQWRSVHVGRVWRPYTQIPFNIGTTFNI**
MRHLAMLALTFNNPIVQNPGSTHSTHFLKISLGGPYSDKEIGIQAKR*************************KIPHPWSLARPINVPSKILDKHRKWSNINLDTRYYLILKTVEERDQGLGLQINTVSKKVGGIDESTVETSGNYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGFTEGNRQSLNQSQGTHFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQIAPTPKPQSGLFVYEVKLKRNCTYQWRSVHVGRVWRPYTQIPFNIGTTFNIGS
*RHLAMLALTFNNPIVQNPGSTHSTHFLKISLGGPYSDKEIGIQAKRNPKQVK**MNP**************KIPHPWSLARPINVPSKILDKHRKWSNINLDTRYYLILKTVEERDQGLGLQINTVSKKVGGIDESTVETSGNYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGFTEGNRQSLNQSQGTHFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQIAPTPKPQSGLFVYEVKLKRNCTYQWRSVHVGRVWRPYTQIPFNIGTTFNIG*
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MRHLAMLALTFNNPIVQNPGSTHSTHFLKISLGGPYSDKEIGIQAKRNPKQVKSKMNPALPDHRKKSRNSGGKIPHPWSLARPINVPSKILDKHRKWSNINLDTRYYLILKTVEERDQGLGLQINTVSKKVGGIDESTVETSGNYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWVQSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFIIITPDNGNGLKGFTEGNRQSLNQSQGTHFAGLKLPSLSICVLPYRLTFCLRFDYNTNESYLIPIRISSTHPLEQIAPTPKPQSGLFVYEVKLKRNCTYQWRSVHVGRVWRPYTQIPFNIGTTFNIGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query429 2.2.26 [Sep-21-2011]
Q96MH6324 Transmembrane protein 68 yes N/A 0.321 0.425 0.365 9e-26
Q0VCR6334 Transmembrane protein 68 yes N/A 0.303 0.389 0.369 1e-25
Q9D850329 Transmembrane protein 68 yes N/A 0.319 0.416 0.365 3e-24
Q5ZJD8332 Transmembrane protein 68 yes N/A 0.331 0.427 0.325 3e-19
>sp|Q96MH6|TMM68_HUMAN Transmembrane protein 68 OS=Homo sapiens GN=TMEM68 PE=2 SV=2 Back     alignment and function desciption
 Score =  118 bits (295), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 29/167 (17%)

Query: 139 VETSGNYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVI 198
           VE   +Y++  F  ++ W+ TPL + I LP   + ++YL+ I L++Y+            
Sbjct: 31  VEQLEDYLN--FANYLLWVFTPLILLI-LPYFTIFLLYLTIIFLHIYK------------ 75

Query: 199 NRAWVQSHPRQRLKEILTEEFT--FWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSS 256
                        K +L E ++   W  AR  +AT+WD H  VWHGYEV  M++IP++  
Sbjct: 76  ------------RKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEDGP 123

Query: 257 ALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPAARFII 303
           ALII+YHGA+P+D YYF++K+F+ K R    VAD+F+F+IP    ++
Sbjct: 124 ALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLL 170





Homo sapiens (taxid: 9606)
>sp|Q0VCR6|TMM68_BOVIN Transmembrane protein 68 OS=Bos taurus GN=TMEM68 PE=2 SV=1 Back     alignment and function description
>sp|Q9D850|TMM68_MOUSE Transmembrane protein 68 OS=Mus musculus GN=Tmem68 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZJD8|TMM68_CHICK Transmembrane protein 68 OS=Gallus gallus GN=TMEM68 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
328792903318 PREDICTED: transmembrane protein 68-like 0.312 0.421 0.477 2e-36
157132405329 hypothetical protein AaeL_AAEL012417 [Ae 0.424 0.553 0.369 2e-33
347965906329 AGAP001441-PA [Anopheles gambiae str. PE 0.340 0.443 0.404 1e-32
307186518318 Transmembrane protein 68 [Camponotus flo 0.331 0.446 0.460 3e-31
380011361318 PREDICTED: transmembrane protein 68-like 0.312 0.421 0.477 1e-30
195130587331 GI15521 [Drosophila mojavensis] gi|19390 0.314 0.407 0.389 9e-30
194769788323 GF21763 [Drosophila ananassae] gi|190622 0.317 0.421 0.367 5e-29
195049331331 GH24072 [Drosophila grimshawi] gi|193893 0.317 0.410 0.361 9e-29
195173837326 GL22433 [Drosophila persimilis] gi|19846 0.340 0.447 0.345 9e-29
195566183323 GD17011 [Drosophila simulans] gi|1942040 0.317 0.421 0.361 1e-28
>gi|328792903|ref|XP_003251799.1| PREDICTED: transmembrane protein 68-like [Apis mellifera] Back     alignment and taxonomy information
 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 21/155 (13%)

Query: 144 NYIDIDFTLWVSWLLTPLFITIFLPLIILSMVYLSAIMLYMYRFGQWCMGTCLVINRAWV 203
            YID+DFTLW+SWLL PL IT  LPL+I++++YL+A++LY+Y+                 
Sbjct: 18  EYIDVDFTLWLSWLLMPLLITFLLPLVIVALLYLTALILYVYKLH--------------- 62

Query: 204 QSHPRQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYH 263
               R RL+     E  + + AR V+A +WDAHGW+W+GYEV+ ++ IP N   L +YYH
Sbjct: 63  ----RVRLRN--AYETDWRNAARNVVAAVWDAHGWIWYGYEVIGIENIPQNEPVLFVYYH 116

Query: 264 GALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIPA 298
           GA+P+D+YYF+SKV L+ +RL+HTVAD FLF+ P 
Sbjct: 117 GAIPIDIYYFISKVLLLNSRLIHTVADRFLFKCPG 151




Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157132405|ref|XP_001656028.1| hypothetical protein AaeL_AAEL012417 [Aedes aegypti] gi|108871186|gb|EAT35411.1| AAEL012417-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|347965906|ref|XP_321690.5| AGAP001441-PA [Anopheles gambiae str. PEST] gi|333470300|gb|EAA01748.5| AGAP001441-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|307186518|gb|EFN72078.1| Transmembrane protein 68 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|380011361|ref|XP_003689776.1| PREDICTED: transmembrane protein 68-like [Apis florea] Back     alignment and taxonomy information
>gi|195130587|ref|XP_002009733.1| GI15521 [Drosophila mojavensis] gi|193908183|gb|EDW07050.1| GI15521 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|194769788|ref|XP_001966983.1| GF21763 [Drosophila ananassae] gi|190622778|gb|EDV38302.1| GF21763 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|195049331|ref|XP_001992699.1| GH24072 [Drosophila grimshawi] gi|193893540|gb|EDV92406.1| GH24072 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|195173837|ref|XP_002027691.1| GL22433 [Drosophila persimilis] gi|198467239|ref|XP_001354318.2| GA11177 [Drosophila pseudoobscura pseudoobscura] gi|194114637|gb|EDW36680.1| GL22433 [Drosophila persimilis] gi|198149405|gb|EAL31371.2| GA11177 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195566183|ref|XP_002106669.1| GD17011 [Drosophila simulans] gi|194204052|gb|EDX17628.1| GD17011 [Drosophila simulans] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
FB|FBgn0085377323 CG34348 [Drosophila melanogast 0.209 0.278 0.422 6.7e-26
ZFIN|ZDB-GENE-040426-1267331 tmem68 "transmembrane protein 0.226 0.293 0.49 7.6e-25
UNIPROTKB|E5RJI9243 TMEM68 "Transmembrane protein 0.214 0.378 0.478 1.5e-23
UNIPROTKB|Q96MH6324 TMEM68 "Transmembrane protein 0.214 0.283 0.478 1.5e-23
UNIPROTKB|Q0VCR6334 TMEM68 "Transmembrane protein 0.214 0.275 0.478 1.9e-23
UNIPROTKB|E2RG69330 TMEM68 "Uncharacterized protei 0.214 0.278 0.478 1.9e-23
UNIPROTKB|F1RT51330 LOC100156514 "Uncharacterized 0.214 0.278 0.468 4.3e-23
MGI|MGI:1919348329 Tmem68 "transmembrane protein 0.212 0.276 0.478 9.7e-23
WB|WBGene00021394387 Y38C1AA.1 [Caenorhabditis eleg 0.270 0.299 0.385 1.2e-20
UNIPROTKB|E1C0A2311 LOC421125 "Uncharacterized pro 0.219 0.302 0.395 9.5e-19
FB|FBgn0085377 CG34348 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 252 (93.8 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
 Identities = 38/90 (42%), Positives = 62/90 (68%)

Query:   208 RQRLKEILTEEFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALP 267
             RQ +   +  +  FW   R ++A +WDAH  ++HGYEV+ ++ +P    ALI+YYHGA+P
Sbjct:    62 RQVIMRAVQGDRNFWRVGRKIVAAIWDAHARIYHGYEVIGLENVPQEGPALIVYYHGAIP 121

Query:   268 VDLYYFLSKVFLVKNRLMHTVADNFLFRIP 297
             +D+YY  S++ L + RL++T+ D FLF++P
Sbjct:   122 IDMYYLNSRMLLQRERLIYTIGDRFLFKLP 151


GO:0008152 "metabolic process" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA
ZFIN|ZDB-GENE-040426-1267 tmem68 "transmembrane protein 68" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E5RJI9 TMEM68 "Transmembrane protein 68" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q96MH6 TMEM68 "Transmembrane protein 68" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCR6 TMEM68 "Transmembrane protein 68" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RG69 TMEM68 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RT51 LOC100156514 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1919348 Tmem68 "transmembrane protein 68" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
WB|WBGene00021394 Y38C1AA.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0A2 LOC421125 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
cd07987212 cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltra 1e-13
>gnl|CDD|153249 cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like Back     alignment and domain information
 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 236 HGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSK-VFLVKNRLMHTVADNFLF 294
           H   +  YEV  ++ IPD   AL+++ HG LP+D     +  + L   RL   +AD+FLF
Sbjct: 1   HRKYFRVYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLF 60

Query: 295 RIPAAR 300
            +P  R
Sbjct: 61  PLPGLR 66


Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. Length = 212

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 429
KOG4321|consensus279 99.96
cd07987212 LPLAT_MGAT-like Lysophospholipid Acyltransferases 99.76
PLN02783315 diacylglycerol O-acyltransferase 99.72
cd07986210 LPLAT_ACT14924-like Lysophospholipid Acyltransfera 99.46
COG0204255 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas 99.44
PRK15018245 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr 99.26
PLN02901214 1-acyl-sn-glycerol-3-phosphate acyltransferase 99.23
PF01553132 Acyltransferase: Acyltransferase; InterPro: IPR002 99.22
TIGR00530130 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra 99.16
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 99.11
PF03982297 DAGAT: Diacylglycerol acyltransferase ; InterPro: 99.04
cd07992203 LPLAT_AAK14816-like Lysophospholipid Acyltransfera 99.04
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.02
cd07988163 LPLAT_ABO13168-like Lysophospholipid Acyltransfera 99.01
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.98
cd06551187 LPLAT Lysophospholipid acyltransferases (LPLATs) o 98.91
cd07991211 LPLAT_LPCAT1-like Lysophospholipid Acyltransferase 98.89
PTZ00261355 acyltransferase; Provisional 98.7
PRK14014301 putative acyltransferase; Provisional 98.69
KOG2848|consensus276 98.5
cd07983189 LPLAT_DUF374-like Lysophospholipid Acyltransferase 98.43
PLN02833376 glycerol acyltransferase family protein 98.43
PLN02499498 glycerol-3-phosphate acyltransferase 98.39
PLN02177497 glycerol-3-phosphate acyltransferase 98.39
TIGR03703 799 plsB glycerol-3-phosphate O-acyltransferase. Membe 98.22
cd07989184 LPLAT_AGPAT-like Lysophospholipid Acyltransferases 98.19
smart00563118 PlsC Phosphate acyltransferases. Function in phosp 98.11
cd07985235 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA 97.99
PRK04974 818 glycerol-3-phosphate acyltransferase; Validated 97.95
PLN02510374 probable 1-acyl-sn-glycerol-3-phosphate acyltransf 97.9
cd07993205 LPLAT_DHAPAT-like Lysophospholipid Acyltransferase 97.89
PRK03355 783 glycerol-3-phosphate acyltransferase; Validated 97.53
KOG0831|consensus334 97.51
PLN02588525 glycerol-3-phosphate acyltransferase 97.45
cd07990193 LPLAT_LCLAT1-like Lysophospholipid Acyltransferase 97.32
PTZ00374 1108 dihydroxyacetone phosphate acyltransferase; Provis 97.29
cd07984192 LPLAT_LABLAT-like Lysophospholipid Acyltransferase 97.11
PRK11915 621 glycerol-3-phosphate acyltransferase; Reviewed 96.46
PRK08419298 lipid A biosynthesis lauroyl acyltransferase; Revi 95.95
PLN02380 376 1-acyl-sn-glycerol-3-phosphate acyltransferase 95.0
PF03279295 Lip_A_acyltrans: Bacterial lipid A biosynthesis ac 93.85
COG1560308 HtrB Lauroyl/myristoyl acyltransferase [Cell envel 86.93
>KOG4321|consensus Back     alignment and domain information
Probab=99.96  E-value=1.2e-30  Score=243.69  Aligned_cols=153  Identities=33%  Similarity=0.618  Sum_probs=133.3

Q ss_pred             CCchhHHHHHHHHHHHHHHhhheeeeEEeecccCCCCCCeEEEEecCCCchhHHHHHHHHHhhCCCchhhhhhhhhccCc
Q psy6562         218 EFTFWHRARTVIATMWDAHGWVWHGYEVVNMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVKNRLMHTVADNFLFRIP  297 (429)
Q Consensus       218 G~DpW~~Ar~~VA~lWd~ha~iWfRyEV~GLENIP~eGPaLLVgNHG~LPID~~yl~aal~l~~gRlLR~LADrFlFklP  297 (429)
                      +.++|...|+.+|++||+|+++||+|||.|+||+|++||+|+|+|||++|+|++|+.+++.+.+.|++.+++|+|+|++|
T Consensus         7 drnfwrvgrkivaaiwdahariyhgyeviglenvpqegpalivyyhgaipidmyylnsrmllqrerliytigdrflfklp   86 (279)
T KOG4321|consen    7 DRNFWRVGRKIVAAIWDAHARIYHGYEVIGLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFKLP   86 (279)
T ss_pred             chhHHHHhHHHHHHHHhhhhhhccceeEeecccCCCcCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEeCC
Confidence            45899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhccC----C------------------CCCcccceecCce-eeeecCCceeeeec----CCCeeeeeecCcceee
Q psy6562         298 AARFIIITP----D------------------NGNGLKGFTEGNR-QSLNQSQGTHFAGL----KLPSLSICVLPYRLTF  350 (429)
Q Consensus       298 G~g~Ll~~~----G------------------~GGaLEgf~egeR-YkL~w~gR~GFVRL----GvPIVPVAiVGaEEay  350 (429)
                      ||+.+....    |                  +||..|+- +|+. |.|.|+.|-||+++    ++||+||-.-.-+|-|
T Consensus        87 gwgtiseafhvspgtvqscvsilrdgnllaispggvyeaq-fgdhyyellwrnrvgfakvaieakapiipcftqnlregf  165 (279)
T KOG4321|consen   87 GWGTISEAFHVSPGTVQSCVSILRDGNLLAISPGGVYEAQ-FGDHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLREGF  165 (279)
T ss_pred             CccchhhhhccCCccHHHHHHhhccCcEEEEcCCceeeec-cchHHHHHHHhccccceeeeeecCCCccchhHHHHHHHH
Confidence            999875432    3                  34444443 4455 46999999999998    9999999999999887


Q ss_pred             ----e----ccccccccCCcccccccCCC
Q psy6562         351 ----C----LRFDYNTNESYLIPIRISST  371 (429)
Q Consensus       351 ----~----lRlLak~LR~p~~Pi~~s~p  371 (429)
                          +    ..-++++.|.|+.|+.-++|
T Consensus       166 rqvgifrtffmrlynkvripvypiyggfp  194 (279)
T KOG4321|consen  166 RQVGIFRTFFMRLYNKVRIPVYPIYGGFP  194 (279)
T ss_pred             HHhhHHHHHHHHHhhcccceeeeccCCcc
Confidence                2    22237999999999998874



>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like Back     alignment and domain information
>PLN02783 diacylglycerol O-acyltransferase Back     alignment and domain information
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 Back     alignment and domain information
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional Back     alignment and domain information
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] Back     alignment and domain information
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] Back     alignment and domain information
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis Back     alignment and domain information
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information
>PTZ00261 acyltransferase; Provisional Back     alignment and domain information
>PRK14014 putative acyltransferase; Provisional Back     alignment and domain information
>KOG2848|consensus Back     alignment and domain information
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 Back     alignment and domain information
>PLN02833 glycerol acyltransferase family protein Back     alignment and domain information
>PLN02499 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PLN02177 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase Back     alignment and domain information
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
>smart00563 PlsC Phosphate acyltransferases Back     alignment and domain information
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT Back     alignment and domain information
>PRK04974 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like Back     alignment and domain information
>PRK03355 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>KOG0831|consensus Back     alignment and domain information
>PLN02588 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like Back     alignment and domain information
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional Back     alignment and domain information
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like Back     alignment and domain information
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed Back     alignment and domain information
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed Back     alignment and domain information
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria Back     alignment and domain information
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
1iuq_A367 Glycerol-3-phosphate acyltransferase; open twisted 97.57
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A Back     alignment and structure
Probab=97.57  E-value=1e-05  Score=80.95  Aligned_cols=75  Identities=15%  Similarity=0.107  Sum_probs=51.7

Q ss_pred             CchhHHHHHHHHHHHHHHhhheeeeEEee-------cccCCCCCCeEEEEecCCCchhHHHHHHHHHhh---CCCchhhh
Q psy6562         219 FTFWHRARTVIATMWDAHGWVWHGYEVVN-------MDRIPDNSSALIIYYHGALPVDLYYFLSKVFLV---KNRLMHTV  288 (429)
Q Consensus       219 ~DpW~~Ar~~VA~lWd~ha~iWfRyEV~G-------LENIP~eGPaLLVgNHG~LPID~~yl~aal~l~---~gRlLR~L  288 (429)
                      +|.+..++..+..+.+.     .+..|.|       .||||+++++++++||-+. +|...+...+-..   -.+.+..+
T Consensus        92 ~d~y~~~~~~ir~li~~-----~~s~V~G~e~~~~~~E~l~~~~~vIfisNHQS~-~D~~vi~~~l~~~~~~l~~~~~fV  165 (367)
T 1iuq_A           92 FDYYIFGQNYIRPLIDF-----GNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFV  165 (367)
T ss_dssp             SCHHHHHHHHHGGGBCG-----GGCEEECHHHHHHHHHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEE
T ss_pred             hhHHHHHHHHHHHHHhh-----cCCEeecchhhhhHHhhccCCCcEEEEECCccc-hhHHHHHHHHhhcccccccceEEE
Confidence            56677777776665552     3667999       8888889999999999554 5998776665210   02345666


Q ss_pred             hhhhhccCcch
Q psy6562         289 ADNFLFRIPAA  299 (429)
Q Consensus       289 ADrFlFklPG~  299 (429)
                      |-+=+++.|..
T Consensus       166 Ak~eL~~~Pl~  176 (367)
T 1iuq_A          166 AGDRVLADPLC  176 (367)
T ss_dssp             ECTHHHHCTTT
T ss_pred             eehhhhcCccc
Confidence            76667766666




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
d1iuqa_367 Glycerol-3-phosphate (1)-acyltransferase {Cushaw s 97.66
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=97.66  E-value=2.1e-06  Score=83.17  Aligned_cols=131  Identities=13%  Similarity=0.136  Sum_probs=88.4

Q ss_pred             CCchhHHHHHHHHHHHHHHhhheeeeEEe--ecccCCCCCCeEEEEecCCCchhHHHHHHHHHhhC---CCchhhhhhhh
Q psy6562         218 EFTFWHRARTVIATMWDAHGWVWHGYEVV--NMDRIPDNSSALIIYYHGALPVDLYYFLSKVFLVK---NRLMHTVADNF  292 (429)
Q Consensus       218 G~DpW~~Ar~~VA~lWd~ha~iWfRyEV~--GLENIP~eGPaLLVgNHG~LPID~~yl~aal~l~~---gRlLR~LADrF  292 (429)
                      .+|.++...+.+..+.|.=..+-.+.|..  ..|++|+.+++++|+||-+. +|..++...+....   .|.++.||.+-
T Consensus        91 ~~~~~~~~~~~~~~li~~~~s~v~~~~~l~~~~Ekl~~g~nVIlvSNHqS~-~D~~il~~ll~~~~~~l~r~i~f~Ak~~  169 (367)
T d1iuqa_          91 PFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDR  169 (367)
T ss_dssp             SSCHHHHHHHHHGGGBCGGGCEEECHHHHHHHHHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTH
T ss_pred             CCCHHHHHHHHHHHHhcCCCCEEecHHHHHHHHHHhcCCCCEEEEECCccc-ccHHHHHHHHhccccccccceEEEeehh
Confidence            46777777777776666444443333333  24889999999999999555 69876655542221   35577889888


Q ss_pred             hccCcchhhhhccCC------------------------------------CCCc-ccceecCceee-------ee----
Q psy6562         293 LFRIPAARFIIITPD------------------------------------NGNG-LKGFTEGNRQS-------LN----  324 (429)
Q Consensus       293 lFklPG~g~Ll~~~G------------------------------------~GGa-LEgf~egeRYk-------L~----  324 (429)
                      +|+.|+++.++...|                                    .||. +-.||||.|.+       +.    
T Consensus       170 l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~~F  249 (367)
T d1iuqa_         170 VLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPF  249 (367)
T ss_dssp             HHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCC
T ss_pred             hhccHHHHHHHHhCCEEEEeccccccccccccchhhhhhhHHHHHHHHHhhcCCeEEEEeccCcccCccccccccccccc
Confidence            899999998754433                                    3544 45778888863       11    


Q ss_pred             -cCCceeeeec----CCC--eeeeeecCccee
Q psy6562         325 -QSQGTHFAGL----KLP--SLSICVLPYRLT  349 (429)
Q Consensus       325 -w~gR~GFVRL----GvP--IVPVAiVGaEEa  349 (429)
                       .++.+|+.+|    |+|  |+|+|+.|.+..
T Consensus       250 ~~~~~~~~~~LA~~sgvP~hV~Pvai~~~d~~  281 (367)
T d1iuqa_         250 DASSVDNMRRLIQHSDVPGHLFPLALLCHDIM  281 (367)
T ss_dssp             CHHHHHHHHHHHHTSSSCEEEEEEEEECGGGS
T ss_pred             CccchHHHHHHHhcCCCCceEechhhhccccc
Confidence             1333445556    999  999999998864