Psyllid ID: psy6866
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 961 | 2.2.26 [Sep-21-2011] | |||||||
| P13607 | 1041 | Sodium/potassium-transpor | yes | N/A | 0.902 | 0.832 | 0.505 | 0.0 | |
| P24797 | 1017 | Sodium/potassium-transpor | yes | N/A | 0.895 | 0.846 | 0.510 | 0.0 | |
| P18907 | 1021 | Sodium/potassium-transpor | yes | N/A | 0.887 | 0.835 | 0.503 | 0.0 | |
| Q8VDN2 | 1023 | Sodium/potassium-transpor | yes | N/A | 0.886 | 0.832 | 0.505 | 0.0 | |
| P06685 | 1023 | Sodium/potassium-transpor | yes | N/A | 0.886 | 0.832 | 0.505 | 0.0 | |
| P04074 | 1021 | Sodium/potassium-transpor | N/A | N/A | 0.887 | 0.835 | 0.504 | 0.0 | |
| Q08DA1 | 1021 | Sodium/potassium-transpor | yes | N/A | 0.887 | 0.835 | 0.504 | 0.0 | |
| Q5RDR3 | 1023 | Sodium/potassium-transpor | yes | N/A | 0.883 | 0.829 | 0.502 | 0.0 | |
| P28774 | 1004 | Sodium/potassium-transpor | N/A | N/A | 0.899 | 0.860 | 0.505 | 0.0 | |
| P05023 | 1023 | Sodium/potassium-transpor | yes | N/A | 0.883 | 0.829 | 0.502 | 0.0 |
| >sp|P13607|ATNA_DROME Sodium/potassium-transporting ATPase subunit alpha OS=Drosophila melanogaster GN=Atpalpha PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/900 (50%), Positives = 603/900 (67%), Gaps = 33/900 (3%)
Query: 85 SKKSILRFIHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRL 144
S++ + ++K++ +D DLK E+DID H I EELY THP+ GLS + K L
Sbjct: 36 SRRKMPAKVNKKENLD-----DLKQELDIDFHKISPEELYQRFQTHPENGLSHAKAKENL 90
Query: 145 EKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWL 204
E+DGPN+L + +F GF+ LLW GA+L F+AY ++A T+EE DNL+L
Sbjct: 91 ERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQASTSEEPADDNLYL 150
Query: 205 GIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVL 264
GI+L+ IVTG+FS+YQE KSS I ESF M+P ATVIR G + + LV GD+V
Sbjct: 151 GIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVE 210
Query: 265 LKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSG 324
+K GD++PADIR+IE ++ K +NSSLTGE EP + T+ +E++NL FFSTN V G
Sbjct: 211 VKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEG 270
Query: 325 SGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALY 384
+ KGVVI G +TVMG+IAGL + L+ TPI +E+ HF+ LI+ A+ LG F++A
Sbjct: 271 TAKGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFI 330
Query: 385 IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRT 444
+GY+WL+A +++IGIIVANVPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS T
Sbjct: 331 LGYHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTST 390
Query: 445 ICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAE 503
IC+DKTGTLTQN+MTV H+ F+ +I D +Q T+ +K L R A LC++AE
Sbjct: 391 ICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAE 450
Query: 504 FEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTV 563
F+ QD +P+ +++ SGDA+E +L ++ + + ++R K+ EVPFNS NK+ +++
Sbjct: 451 FKGGQDGVPILKKEVSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSI 510
Query: 564 HFSPLN---KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGER 620
H + +Y L+MKGAPE I+ERC+T+ KE L E K + GER
Sbjct: 511 HETEDTNDPRYLLVMKGAPERILERCSTIFING-KEKVLDEEMKEAFNNAYMELGGLGER 569
Query: 621 VLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGI 680
VL F D L + +P FKF+TD +NFP R +GL+S+ DPPR AVPDA+ C AGI
Sbjct: 570 VLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGI 629
Query: 681 RVIMVTGDHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLR 719
+VIMVTGDHP TAKAIA I+SE + + V G +LR
Sbjct: 630 KVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVVHGAELR 689
Query: 720 KITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG 779
++ ++L +IL + E+VFARTSP QKL IVE Q + IVAVTGDGVND+PALKKADIG
Sbjct: 690 DVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIG 749
Query: 780 IAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFL 839
+AMGI GS+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL
Sbjct: 750 VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFL 809
Query: 840 FYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVT 899
+I IPLP+ TVT+LCIDLGTDM PA+SLAYE E++IM R PR+P D LV +L++
Sbjct: 810 AFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFNDKLVNSRLIS 869
Query: 900 YAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
AY +G+++ AGF YF +M + G+ P L IRK W+S N+L DSY + WT +R
Sbjct: 870 MAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDR 929
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Drosophila melanogaster (taxid: 7227) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 9 |
| >sp|P24797|AT1A2_CHICK Sodium/potassium-transporting ATPase subunit alpha-2 OS=Gallus gallus GN=ATP1A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/893 (51%), Positives = 597/893 (66%), Gaps = 32/893 (3%)
Query: 91 RFIHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPN 150
R KEKE+D +LK EV++D+H + L+EL RGLS L +DGPN
Sbjct: 19 RRKQKEKELD-----ELKKEVNLDDHKLSLDELGRKYQVDLSRGLSNARAAEVLAQDGPN 73
Query: 151 SLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILAL 210
+L +F GFS LLW GA+L FLAY ++A +E DNL+LG++LA
Sbjct: 74 ALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQAAMEDEPSNDNLYLGVVLAA 133
Query: 211 TCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDK 270
IVTG FS+YQE KSS I +SF M+P +A VIR G +I++ +V GD+V +K GD+
Sbjct: 134 VVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREGEKIQINAENVVVGDLVEVKGGDR 193
Query: 271 VPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVV 330
VPAD+R+I K +NSSLTGE EP T + T+ +E+RN+ FFSTN V G+ +G+V
Sbjct: 194 VPADMRIISSHGCKVDNSSLTGESEPQTRSPEFTHENPLETRNICFFSTNCVEGTARGIV 253
Query: 331 ILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWL 390
I TG TVMG+IA L + LE TPI E++HF+RLI+ A+ LG F+L+L +GY WL
Sbjct: 254 ISTGDRTVMGRIASLASGLEVGRTPIAMEIEHFIRLITGVAVFLGLSFFILSLILGYTWL 313
Query: 391 NACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKT 450
A +++IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKT
Sbjct: 314 EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKT 373
Query: 451 GTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNT-TYKTLVRAACLCSKAEFEPNQD 509
GTLTQN+MTV H+ F+ +I+ D F+ + T+ L R A LC++A F+P Q+
Sbjct: 374 GTLTQNRMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWAALSRIAGLCNRAVFKPGQE 433
Query: 510 NIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN 569
NI + +R +GDA+E +L IQ S++ +R+ PKVTE+PFNS NK+ L++H +
Sbjct: 434 NISISKRDTAGDASESALLKCIQLSCGSVKKMRDKNPKVTEIPFNSTNKYQLSIHEREED 493
Query: 570 --KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADL 627
+ L+MKGAPE I+ERC+ ++ + +E L E K ++ GERVL F L
Sbjct: 494 PQGHILVMKGAPERILERCSRILLQG-QEVPLDEEMKEAFQNAYLELGGLGERVLGFCHL 552
Query: 628 HLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTG 687
+L + FP F+F D +NFP+S +GL+S+ DPPR AVPDA+ C AGI+VIMVTG
Sbjct: 553 YLPPDKFPRGFRFDADEVNFPTSDLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTG 612
Query: 688 DHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEEL 726
DHP TAKAIA I+SE + + V G+DL+ +T E+L
Sbjct: 613 DHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPREAKACVVHGSDLKDMTAEQL 672
Query: 727 KDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG 786
+IL + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIGIAMGI G
Sbjct: 673 DEILRNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAG 732
Query: 787 SEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGI 846
S+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I I
Sbjct: 733 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIIANI 792
Query: 847 PLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLG 906
PLP+ TVT+LCIDLGTDM PA+SLAYE ES+IM R+PRNPRTD LV +L++ AY +G
Sbjct: 793 PLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRTDKLVNERLISMAYGQIG 852
Query: 907 ILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWE--SNNNLEDSYHKMWTRTER 957
+++ L GF TYF ++ + G+ P LL +R +W+ S N+LEDSY + WT +R
Sbjct: 853 MIQALGGFFTYFVILAENGFLPARLLGVRLAWDDRSTNDLEDSYGQEWTYEQR 905
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|P18907|AT1A1_HORSE Sodium/potassium-transporting ATPase subunit alpha-1 OS=Equus caballus GN=ATP1A1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/894 (50%), Positives = 601/894 (67%), Gaps = 41/894 (4%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
KE++MD +LK EV +D+H + L+EL T RGL+ L +DGPN+L
Sbjct: 26 KERDMD-----ELKKEVSMDDHKLSLDELQRKYGTDLSRGLTTARAAEILARDGPNALTP 80
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 81 PPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAATEEEPQNDNLYLGVVLSAVVII 140
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A V+RNG I++ +V GD+V +K GD++PAD
Sbjct: 141 TGCFSYYQEAKSSKIMESFKNMVPQQALVVRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 200
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 201 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 260
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 261 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVTFFILSLILEYTWLEAVI 320
Query: 395 YVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 321 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 380
Query: 455 QNKMTVLHLSFNREIYHV-----KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQD 509
QN+MTV H+ F+ +I+ ++GV D +T+ T+ +L R A LC++A F+ NQ+
Sbjct: 381 QNRMTVAHMWFDNQIHEADTTENQSGVSFD----KTSATWLSLSRIAGLCNRAVFQANQE 436
Query: 510 NIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN 569
NIP+ +R +GDA+E +L I+ S++++R+ +PK+ E+PFNS NK+ L++H +P
Sbjct: 437 NIPILKRAVAGDASESALLKCIELCCGSVKEMRDRYPKIVEIPFNSTNKYQLSIHKNPNT 496
Query: 570 ---KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFAD 626
++ L+MKGAPE I++RC++++ KE L E K ++ GERVL F
Sbjct: 497 SEPQHLLVMKGAPERILDRCSSILLNG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCH 555
Query: 627 LHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVT 686
L L FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVT
Sbjct: 556 LFLPDEQFPEGFQFDTDDVNFPLENLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 615
Query: 687 GDHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEE 725
GDHP TAKAIA I+SE + + V G+DL+ +T E+
Sbjct: 616 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTPEQ 675
Query: 726 LKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGIT 785
L DIL + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI
Sbjct: 676 LDDILRHHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIA 735
Query: 786 GSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLG 845
GS+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I
Sbjct: 736 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN 795
Query: 846 IPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHL 905
IPLP+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +
Sbjct: 796 IPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPQTDKLVNERLISMAYGQI 855
Query: 906 GILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
G+++ L GF TYF ++ + G+ P+ LL +R W+ N++EDSY + WT +R
Sbjct: 856 GMIQALGGFFTYFVILAENGFLPIHLLGLRVDWDDRWVNDVEDSYGQQWTYEQR 909
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Equus caballus (taxid: 9796) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|Q8VDN2|AT1A1_MOUSE Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus GN=Atp1a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/893 (50%), Positives = 599/893 (67%), Gaps = 41/893 (4%)
Query: 96 EKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQK 155
E++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 29 ERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTPARAAEILARDGPNALTPP 83
Query: 156 YRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVT 215
+F GFS LLW GA+L FLAY + + T EE P D+L+LG++L+ I+T
Sbjct: 84 PTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIRSATEEEPPNDDLYLGVVLSAVVIIT 143
Query: 216 GMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADI 275
G FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD+
Sbjct: 144 GCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEDVVVGDLVEVKGGDRIPADL 203
Query: 276 RLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGS 335
R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 204 RIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGD 263
Query: 336 NTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVY 395
TVMG+IA L + LE TPI +E++HF+ LI+ A+ LG F+L+L + Y WL A ++
Sbjct: 264 RTVMGRIATLASGLEGGQTPIAEEIEHFIHLITGVAVFLGVSFFILSLILEYTWLEAVIF 323
Query: 396 VIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQ 455
+IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLTQ
Sbjct: 324 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 383
Query: 456 NKMTVLHLSFNREIYHV-----KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDN 510
N+MTV H+ F+ +I+ ++GV D +T+ T+ L R A LC++A F+ NQ+N
Sbjct: 384 NRMTVAHMWFDNQIHEADTTENQSGVSFD----KTSATWFALSRIAGLCNRAVFQANQEN 439
Query: 511 IPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP--- 567
+P+ +R +GDA+E +L I+ S+ ++R + K+ E+PFNS NK+ L++H +P
Sbjct: 440 LPILKRAVAGDASESALLKCIEVCCGSVMEMREKYSKIVEIPFNSTNKYQLSIHKNPNAS 499
Query: 568 LNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADL 627
K+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L
Sbjct: 500 EPKHLLVMKGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHL 558
Query: 628 HLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTG 687
L FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTG
Sbjct: 559 LLPDEQFPEGFQFDTDDVNFPVDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTG 618
Query: 688 DHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEEL 726
DHP TAKAIA I+SE + + V G+DL+ +T EEL
Sbjct: 619 DHPITAKAIAKGVGIISEGNETVEDIAARLNIPVNQVNPRDAKACVVHGSDLKDMTSEEL 678
Query: 727 KDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG 786
DIL + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI G
Sbjct: 679 DDILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVG 738
Query: 787 SEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGI 846
S+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I I
Sbjct: 739 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI 798
Query: 847 PLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLG 906
PLP+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +G
Sbjct: 799 PLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIG 858
Query: 907 ILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+++ L GF TYF ++ + G+ P LL IR++W+ N++EDSY + WT +R
Sbjct: 859 MIQALGGFFTYFVILAENGFLPFHLLGIRETWDDRWVNDVEDSYGQQWTYEQR 911
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|P06685|AT1A1_RAT Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus GN=Atp1a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/893 (50%), Positives = 599/893 (67%), Gaps = 41/893 (4%)
Query: 96 EKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQK 155
E++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 29 ERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTPARAAEILARDGPNALTPP 83
Query: 156 YRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVT 215
+F GFS LLW GA+L FLAY + + T EE P D+L+LG++L+ I+T
Sbjct: 84 PTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIRSATEEEPPNDDLYLGVVLSAVVIIT 143
Query: 216 GMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADI 275
G FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD+
Sbjct: 144 GCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEDVVVGDLVEVKGGDRIPADL 203
Query: 276 RLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGS 335
R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 204 RIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGD 263
Query: 336 NTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVY 395
TVMG+IA L + LE TPI +E++HF+ LI+ A+ LG F+L+L + Y WL A ++
Sbjct: 264 RTVMGRIATLASGLEGGQTPIAEEIEHFIHLITGVAVFLGVSFFILSLILEYTWLEAVIF 323
Query: 396 VIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQ 455
+IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLTQ
Sbjct: 324 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 383
Query: 456 NKMTVLHLSFNREIYHV-----KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDN 510
N+MTV H+ F+ +I+ ++GV D +T+ T+ L R A LC++A F+ NQ+N
Sbjct: 384 NRMTVAHMWFDNQIHEADTTENQSGVSFD----KTSATWFALSRIAGLCNRAVFQANQEN 439
Query: 511 IPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP--- 567
+P+ +R +GDA+E +L I+ S+ ++R + K+ E+PFNS NK+ L++H +P
Sbjct: 440 LPILKRAVAGDASESALLKCIEVCCGSVMEMREKYTKIVEIPFNSTNKYQLSIHKNPNAS 499
Query: 568 LNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADL 627
K+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L
Sbjct: 500 EPKHLLVMKGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHL 558
Query: 628 HLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTG 687
L FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTG
Sbjct: 559 LLPDEQFPEGFQFDTDEVNFPVDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTG 618
Query: 688 DHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEEL 726
DHP TAKAIA I+SE + + V G+DL+ +T EEL
Sbjct: 619 DHPITAKAIAKGVGIISEGNETVEDIAARLNIPVNQVNPRDAKACVVHGSDLKDMTSEEL 678
Query: 727 KDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG 786
DIL + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI G
Sbjct: 679 DDILRYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIVG 738
Query: 787 SEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGI 846
S+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I I
Sbjct: 739 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI 798
Query: 847 PLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLG 906
PLP+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +G
Sbjct: 799 PLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIG 858
Query: 907 ILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+++ L GF TYF ++ + G+ P LL IR++W+ N++EDSY + WT +R
Sbjct: 859 MIQALGGFFTYFVILAENGFLPFHLLGIRETWDDRWINDVEDSYGQQWTYEQR 911
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|P04074|AT1A1_SHEEP Sodium/potassium-transporting ATPase subunit alpha-1 OS=Ovis aries GN=ATP1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/894 (50%), Positives = 600/894 (67%), Gaps = 41/894 (4%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
KE++MD +LK EV +D+H + L+EL+ T +RGL+ L +DGPN+L
Sbjct: 26 KERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLNRGLTTARAAEILARDGPNALTP 80
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 81 PPTTPEWVKFCRQLFGGFSMLLWIGAVLCFLAYGIQAATEEEPQNDNLYLGVVLSAVVII 140
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 141 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 200
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 201 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 260
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 261 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVI 320
Query: 395 YVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 321 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 380
Query: 455 QNKMTVLHLSFNREIYHV-----KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQD 509
QN+MTV H+ F+ +I+ ++GV D +T+ T+ L R A LC++A F+ NQD
Sbjct: 381 QNRMTVAHMWFDNQIHEADTTENQSGVSFD----KTSATWLALSRIAGLCNRAVFQANQD 436
Query: 510 NIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN 569
N+P+ +R +GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +
Sbjct: 437 NLPILKRAVAGDASESALLKCIEVCCGSVKEMRERYAKIVEIPFNSTNKYQLSIHKNANA 496
Query: 570 ---KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFAD 626
++ L+MKGAPE I++RC++++ KE L E K ++ GERVL F
Sbjct: 497 GEPRHLLVMKGAPERILDRCSSILIHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCH 555
Query: 627 LHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVT 686
L L FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVT
Sbjct: 556 LMLPDEQFPEGFQFDTDDVNFPVDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 615
Query: 687 GDHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEE 725
GDHP TAKAIA I+SE + + V G+DL+ +T E+
Sbjct: 616 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDARACVVHGSDLKDMTPEQ 675
Query: 726 LKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGIT 785
L DIL+ + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI
Sbjct: 676 LDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIA 735
Query: 786 GSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLG 845
GS+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I
Sbjct: 736 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN 795
Query: 846 IPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHL 905
IPLP+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +
Sbjct: 796 IPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPQTDKLVNERLISMAYGQI 855
Query: 906 GILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
G+++ L GF TYF +M + G+ P LL IR +W+ N++EDSY + WT +R
Sbjct: 856 GMIQALGGFFTYFVIMAENGFLPNHLLGIRVTWDDRWINDVEDSYGQQWTYEQR 909
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Ovis aries (taxid: 9940) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|Q08DA1|AT1A1_BOVIN Sodium/potassium-transporting ATPase subunit alpha-1 OS=Bos taurus GN=ATP1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/894 (50%), Positives = 599/894 (67%), Gaps = 41/894 (4%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
KE++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 26 KERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTTARAAEILARDGPNALTP 80
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 81 PPTTPEWVKFCRQLFGGFSMLLWIGAVLCFLAYGIQAATEEEPQNDNLYLGVVLSAVVII 140
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 141 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 200
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 201 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 260
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 261 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVI 320
Query: 395 YVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 321 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 380
Query: 455 QNKMTVLHLSFNREIYHV-----KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQD 509
QN+MTV H+ F+ +I+ ++GV D +T+ T+ L R A LC++A F+ NQD
Sbjct: 381 QNRMTVAHMWFDNQIHEADTTENQSGVSFD----KTSATWLALSRIAGLCNRAVFQANQD 436
Query: 510 NIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVH---FS 566
N+P+ +R +GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +
Sbjct: 437 NLPILKRAVAGDASESALLKCIEVCCGSVKEMRERYTKIVEIPFNSTNKYQLSIHKNANA 496
Query: 567 PLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFAD 626
++ L+MKGAPE I++RC++++ KE L E K ++ GERVL F
Sbjct: 497 GEPRHLLVMKGAPERILDRCSSILIHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCH 555
Query: 627 LHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVT 686
L L FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVT
Sbjct: 556 LLLPDEQFPEGFQFDTDDVNFPVDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 615
Query: 687 GDHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEE 725
GDHP TAKAIA I+SE + + V G+DL+ +T E+
Sbjct: 616 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDARACVVHGSDLKDMTPEQ 675
Query: 726 LKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGIT 785
L DIL+ + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI
Sbjct: 676 LDDILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIA 735
Query: 786 GSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLG 845
GS+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I
Sbjct: 736 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN 795
Query: 846 IPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHL 905
IPLP+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +
Sbjct: 796 IPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPQTDKLVNERLISMAYGQI 855
Query: 906 GILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
G+++ L GF TYF +M + G+ P LL IR +W+ N++EDSY + WT +R
Sbjct: 856 GMIQALGGFFTYFVIMAENGFLPNHLLGIRVTWDDRWINDVEDSYGQQWTYEQR 909
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|Q5RDR3|AT1A1_PONAB Sodium/potassium-transporting ATPase subunit alpha-1 OS=Pongo abelii GN=ATP1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/885 (50%), Positives = 595/885 (67%), Gaps = 36/885 (4%)
Query: 104 LRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYV 163
+ +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 32 MDELKKEVSMDDHKLSLDELHRKYGTDLSRGLTSARAAEILARDGPNALTPPPTTPEWIK 91
Query: 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+TG FS+YQE
Sbjct: 92 FCRQLFGGFSMLLWIGAILCFLAYSIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQE 151
Query: 224 RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283
KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD+R+I
Sbjct: 152 AKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGC 211
Query: 284 KAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG TVMG+IA
Sbjct: 212 KVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIA 271
Query: 344 GLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403
L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +++IGIIVAN
Sbjct: 272 TLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVAN 331
Query: 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHL 463
VPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV H+
Sbjct: 332 VPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 391
Query: 464 SFNREIYHV-----KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKA 518
F+ +I+ ++GV D +T+ T+ L R A LC++A F+ NQ+N+P+ +R
Sbjct: 392 WFDNQIHEAGTTENQSGVSFD----KTSATWLALSRIAGLCNRAVFQANQENLPILKRAV 447
Query: 519 SGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---KYFLLM 575
+GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +P ++ L+M
Sbjct: 448 AGDASESALLKCIELCCGSVKEMRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPRHLLVM 507
Query: 576 KGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFP 635
KGAPE I++RC++++ KE L E K ++ GERVL F L L FP
Sbjct: 508 KGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLPDEQFP 566
Query: 636 VNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA 695
F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP TAKA
Sbjct: 567 EGFQFDTDDVNFPIDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 626
Query: 696 IAIKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNK 734
IA I+SE + + V G+DL+ +T E+L DIL+ +
Sbjct: 627 IAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHT 686
Query: 735 ELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTA 794
E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI GS+VSKQ A
Sbjct: 687 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 746
Query: 795 DMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVT 854
DMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+ TVT
Sbjct: 747 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVT 806
Query: 855 VLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGF 914
+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +G+++ L GF
Sbjct: 807 ILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISTAYGQIGMIQALGGF 866
Query: 915 LTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
TYF ++ + G+ P+ LL +R W+ N++EDSY + WT +R
Sbjct: 867 FTYFVILAENGFLPLHLLGLRVDWDDRWINDVEDSYGQQWTYEQR 911
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Pongo abelii (taxid: 9601) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|P28774|AT1B_ARTSF Sodium/potassium-transporting ATPase subunit alpha-B OS=Artemia franciscana PE=2 SV=1 | Back alignment and function description |
|---|
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/893 (50%), Positives = 590/893 (66%), Gaps = 29/893 (3%)
Query: 93 IHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSL 152
+ K K+ L +LK E+DID H IP+EE Y L ++P+ GL+ + + +E+DGPN L
Sbjct: 1 MAKGKQKKGKDLNELKKELDIDFHKIPIEECYQRLGSNPETGLTNAQARSNIERDGPNCL 60
Query: 153 PQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAET-NEEKPQDNLWLGIILALT 211
+F GF+ LLW GA+L FLAY +EA + NE+ +DNL+LGI+LA
Sbjct: 61 TPPKTTPEWIKFCKNLFGGFALLLWTGAILCFLAYGIEASSGNEDMLKDNLYLGIVLATV 120
Query: 212 CIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKV 271
IVTG+FS+YQE KSS I +SF ++P A +R G + + L GDIV +K GD+V
Sbjct: 121 VIVTGIFSYYQENKSSRIMDSFKNLVPQYALALREGQRVTLKAEELTMGDIVEVKFGDRV 180
Query: 272 PADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVI 331
PAD+R++E + K +NSSLTGE EP + TN +E++NL FFSTN V G+ +G+VI
Sbjct: 181 PADLRVLEARSFKVDNSSLTGESEPQARSPEFTNDNPLETKNLAFFSTNAVEGTMRGIVI 240
Query: 332 LTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLN 391
G NTVMG+IAGL + L+ TPI +E+ HF+ +I+ A+ LG F++A +GY+WL+
Sbjct: 241 GIGDNTVMGRIAGLASGLDTGETPIAKEIAHFIHIITGVAVFLGVTFFIIAFVLGYHWLD 300
Query: 392 ACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTG 451
A V++IGIIVANVPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTG
Sbjct: 301 AVVFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTG 360
Query: 452 TLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTT-YKTLVRAACLCSKAEFEPNQDN 510
TLTQN+MTV H+ F+ I D F+ ++ +K LV+ A LCS+AEF+PNQ
Sbjct: 361 TLTQNRMTVAHMWFDGTITEADTTEDQSGAQFDKSSAGWKALVKIAALCSRAEFKPNQST 420
Query: 511 IPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS---P 567
P+ +R+ +GDA+E IL ++ + +R K+ E+PFNS NKF +++H +
Sbjct: 421 TPILKREVTGDASEAAILKCVELTTGETEAIRKRNKKICEIPFNSANKFQVSIHENEDKS 480
Query: 568 LNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADL 627
+Y L+MKGAPE I+ERC+T+ KE +T E K + GERVL F D
Sbjct: 481 DGRYLLVMKGAPERILERCSTIFMNG-KEIDMTEELKEAFNNAYMELGGLGERVLGFCDY 539
Query: 628 HLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTG 687
L + +P F F+ D NFP +G R GL+S+ DPPR AVPDA+ C AGI+VIMVTG
Sbjct: 540 LLPLDKYPHGFAFNADDANFPLTGLRFAGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTG 599
Query: 688 DHPCTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEEL 726
DHP TAKAIA I+SE + + V G +LR IT + L
Sbjct: 600 DHPITAKAIAKSVGIISEGNETVEDIAARLNIPVSEVNPRDAKAAVVHGGELRDITPDAL 659
Query: 727 KDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG 786
+IL + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI G
Sbjct: 660 DEILRHHPEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAG 719
Query: 787 SEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGI 846
S+VSKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSI Y L SNIPEI PFL +I I
Sbjct: 720 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIVYTLTSNIPEISPFLLFILFDI 779
Query: 847 PLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLG 906
PLP+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R PRNP TD LV +L++ AY +G
Sbjct: 780 PLPLGTVTILCIDLGTDMVPAISLAYEEAESDIMKRRPRNPVTDKLVNERLISLAYGQIG 839
Query: 907 ILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+++ AGF YF +M + G+ P DL +RK W+S N+L DSY + WT R
Sbjct: 840 MIQASAGFFVYFVIMAECGFLPWDLFGLRKHWDSRAVNDLTDSYGQEWTYDAR 892
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Artemia franciscana (taxid: 6661) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
| >sp|P05023|AT1A1_HUMAN Sodium/potassium-transporting ATPase subunit alpha-1 OS=Homo sapiens GN=ATP1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/885 (50%), Positives = 595/885 (67%), Gaps = 36/885 (4%)
Query: 104 LRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYV 163
+ +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 32 MDELKKEVSMDDHKLSLDELHRKYGTDLSRGLTSARAAEILARDGPNALTPPPTTPEWIK 91
Query: 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+TG FS+YQE
Sbjct: 92 FCRQLFGGFSMLLWIGAILCFLAYSIQAATEEEPQNDNLYLGVVLSAVVIITGCFSYYQE 151
Query: 224 RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283
KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD+R+I
Sbjct: 152 AKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGC 211
Query: 284 KAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG TVMG+IA
Sbjct: 212 KVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIA 271
Query: 344 GLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403
L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +++IGIIVAN
Sbjct: 272 TLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVIFLIGIIVAN 331
Query: 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHL 463
VPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV H+
Sbjct: 332 VPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 391
Query: 464 SFNREIYHV-----KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKA 518
F+ +I+ ++GV D +T+ T+ L R A LC++A F+ NQ+N+P+ +R
Sbjct: 392 WFDNQIHEADTTENQSGVSFD----KTSATWLALSRIAGLCNRAVFQANQENLPILKRAV 447
Query: 519 SGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---KYFLLM 575
+GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +P ++ L+M
Sbjct: 448 AGDASESALLKCIELCCGSVKEMRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPQHLLVM 507
Query: 576 KGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFP 635
KGAPE I++RC++++ KE L E K ++ GERVL F L L FP
Sbjct: 508 KGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLPDEQFP 566
Query: 636 VNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA 695
F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP TAKA
Sbjct: 567 EGFQFDTDDVNFPIDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 626
Query: 696 IAIKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNK 734
IA I+SE + + V G+DL+ +T E+L DIL+ +
Sbjct: 627 IAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHT 686
Query: 735 ELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTA 794
E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI GS+VSKQ A
Sbjct: 687 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 746
Query: 795 DMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVT 854
DMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+ TVT
Sbjct: 747 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTVT 806
Query: 855 VLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGF 914
+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +G+++ L GF
Sbjct: 807 ILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGF 866
Query: 915 LTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
TYF ++ + G+ P+ LL +R W+ N++EDSY + WT +R
Sbjct: 867 FTYFVILAENGFLPIHLLGLRVDWDDRWINDVEDSYGQQWTYEQR 911
|
This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 961 | ||||||
| 407731560 | 1005 | Na+,K+ ATPase alpha-subunit 2 [Aphis ner | 0.886 | 0.847 | 0.550 | 0.0 | |
| 383859883 | 1008 | PREDICTED: sodium/potassium-transporting | 0.887 | 0.846 | 0.523 | 0.0 | |
| 383859885 | 1007 | PREDICTED: sodium/potassium-transporting | 0.887 | 0.847 | 0.523 | 0.0 | |
| 407731616 | 1036 | Na+,K+ ATPase alpha-subunit 1 [Trichorde | 0.894 | 0.830 | 0.520 | 0.0 | |
| 407731562 | 1036 | Na+,K+ ATPase alpha-subunit 1 [Papilio g | 0.894 | 0.830 | 0.518 | 0.0 | |
| 307177456 | 1007 | Sodium/potassium-transporting ATPase sub | 0.887 | 0.847 | 0.522 | 0.0 | |
| 407731570 | 1043 | Na+,K+ ATPase alpha-subunit 1 [Cyrtepist | 0.889 | 0.819 | 0.519 | 0.0 | |
| 407731614 | 1006 | Na+,K+ ATPase alpha-subunit 1A, partial | 0.896 | 0.856 | 0.516 | 0.0 | |
| 322788172 | 1048 | hypothetical protein SINV_06202 [Solenop | 0.887 | 0.813 | 0.522 | 0.0 | |
| 407731586 | 1041 | Na+,K+ ATPase alpha-subunit 1 [Lophocamp | 0.894 | 0.826 | 0.518 | 0.0 |
| >gi|407731560|gb|AFU25666.1| Na+,K+ ATPase alpha-subunit 2 [Aphis nerii] | Back alignment and taxonomy information |
|---|
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/884 (55%), Positives = 615/884 (69%), Gaps = 32/884 (3%)
Query: 102 AQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNV 161
A++ DLK E+D+D+H IPL ELY+ +T P+RGL+ + KR L +DGPNSL R
Sbjct: 14 AKMSDLKKEIDLDDHRIPLPELYTRYETDPERGLTTSQAKRLLLRDGPNSLTPPKRTPAW 73
Query: 162 YVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFY 221
+L+ ++F GFS LLW GA L FLAY ++ T+EE +DNLWLG +L L C++TG+F++
Sbjct: 74 IILLKHLFEGFSILLWAGAALCFLAYGIQYSTSEEPQEDNLWLGTVLVLVCVITGVFAYS 133
Query: 222 QERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ 281
QE KSS I +SF M+P A V+R+G K I S+ LVRGDIV +K GD+VPAD+R+IE
Sbjct: 134 QEAKSSRIMDSFKNMVPQYANVVRDGERKNILSSELVRGDIVEVKFGDRVPADVRIIEAH 193
Query: 282 DLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGK 341
+ K +NSSLTGE EP + +E+ NL FFSTN V G+ K +VIL G NTVMG+
Sbjct: 194 NFKVDNSSLTGETEPQPRDSAVSKVQVLEANNLAFFSTNAVEGTAKALVILCGDNTVMGR 253
Query: 342 IAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIV 401
IAGLT RLE++ TPI E+ HFM LIS WA+ LG F++A +GY+WL+A +++IGIIV
Sbjct: 254 IAGLTTRLEQRDTPIANEIHHFMHLISAWAIFLGISFFIMAFLLGYHWLDAFMFLIGIIV 313
Query: 402 ANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVL 461
ANVPEGLLAT+TV L+LTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV
Sbjct: 314 ANVPEGLLATVTVCLSLTAKRMASKNCVVKHLEAVETLGSTSTICSDKTGTLTQNRMTVT 373
Query: 462 HLSFNREIYHVK-----NGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRER 516
HLS+N+EI V GV + +N Y++LVR CLCS+AEF QDN P+ +R
Sbjct: 374 HLSYNKEIIEVDYFKDPTGVTEEARN---TKAYQSLVRGGCLCSRAEFICGQDNTPVLKR 430
Query: 517 KASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMK 576
+ GDA+E I+ F + + + R+ KV E+PFNS +KF +++H P L+MK
Sbjct: 431 EVMGDASEAAIIKFSELAVGDVMAFRDQHKKVAEIPFNSSDKFQVSIHALPSKGQLLVMK 490
Query: 577 GAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPV 636
GAPE I+ RCT M D L + E+++ I+ S GERVL F DL L FP+
Sbjct: 491 GAPERILARCTRMRY-GDGVVELDENIRQEMDEIIEQLGSYGERVLGFCDLFLSTEQFPI 549
Query: 637 NFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAI 696
F F+TDP NFP + R +GL+S+ DPPRP VPDA+ C AGIRVIMVTGDHP TAKAI
Sbjct: 550 GFNFTTDPPNFPLTDLRFLGLMSMIDPPRPGVPDAVAKCRSAGIRVIMVTGDHPVTAKAI 609
Query: 697 AIKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNKE 735
A I++E S S V G+ LR ++ EEL+ +L TN+E
Sbjct: 610 AKAVGIITEGSETLEDIAKRRRVPVSSLDPRESTTIVIQGSLLRDMSTEELEHVLRTNRE 669
Query: 736 LVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD 795
+VFARTSP QKL IVE Q+L IVAVTGDGVND+PALKKADIGIAMGITGS+VSKQTAD
Sbjct: 670 IVFARTSPTQKLNIVEGCQNLGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQTAD 729
Query: 796 MILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTV 855
MIL+DDNFASIV G+EEGRLIFDNLKKSIAY LASN+PEI PFL +I GIPLP+ V V
Sbjct: 730 MILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLASNVPEITPFLLFILSGIPLPLGVVAV 789
Query: 856 LCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFL 915
LCIDLGTDMWPA+SLAYE+ ES+IM R PRNP TD LV KL+ AY +G++E +AGF
Sbjct: 790 LCIDLGTDMWPAISLAYERAESDIMLRHPRNPSTDKLVNGKLIFVAYGQIGVIEAVAGFF 849
Query: 916 TYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+YF +M GW P L+ IR W+S N+LEDSY + WT T R
Sbjct: 850 SYFVIMAQCGWLPRRLIGIRNEWDSKSVNDLEDSYGQEWTFTHR 893
|
Source: Aphis nerii Species: Aphis nerii Genus: Aphis Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859883|ref|XP_003705421.1| PREDICTED: sodium/potassium-transporting ATPase subunit alpha-like isoform 1 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/881 (52%), Positives = 600/881 (68%), Gaps = 28/881 (3%)
Query: 104 LRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYV 163
L DLK E+DID H I EELY THP+ GLS + K LE+DGPNSL +
Sbjct: 17 LDDLKQELDIDFHKITPEELYQRFQTHPENGLSHAKAKENLERDGPNSLTPPKQTPEWVK 76
Query: 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223
+F GF+ LLW GA+L F+AY ++A T+E+ DNL+LGI+LA IVTG+FS+YQE
Sbjct: 77 FCKNLFGGFALLLWIGAILCFIAYSIQATTSEDPNDDNLYLGIVLAAVVIVTGIFSYYQE 136
Query: 224 RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283
KSS I ESF M+P ATVIR G + + LV GD+V +K GD++PADIR+IE +
Sbjct: 137 SKSSKIMESFKNMVPQFATVIREGEKLTLRAEELVLGDVVEVKFGDRIPADIRIIESRGF 196
Query: 284 KAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
K +NSSLTGE EP + + TN +E++NL FFSTN V G+ KGVVI G TVMG+IA
Sbjct: 197 KVDNSSLTGESEPQSRSPEFTNENPLETKNLAFFSTNAVEGTAKGVVICCGDQTVMGRIA 256
Query: 344 GLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403
GL + L+ TPI +E+ HF+ LI+ A+ LG F++A +GY+WL+A +++IGIIVAN
Sbjct: 257 GLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFIIAFILGYHWLDAVIFLIGIIVAN 316
Query: 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHL 463
VPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV H+
Sbjct: 317 VPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 376
Query: 464 SFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522
F+ +I D +Q T+ +K L + A LC++AEF+P QD IP+ +R+ +GDA
Sbjct: 377 WFDNQIIEADTTEDQSGLQYDRTSPGFKALAKIATLCNRAEFKPGQDEIPILKREVNGDA 436
Query: 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-KYFLLMKGAP 579
+E +L ++ + + +R KV E+PFNS NK+ +++H S P + ++ L+MKGAP
Sbjct: 437 SEAALLKCMELALGDVMGIRKRNKKVCEIPFNSTNKYQVSIHESDNPDDPRHLLVMKGAP 496
Query: 580 EVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK 639
E I++RC+T+ KE L E K + GERVL F D L + FP+ FK
Sbjct: 497 ERILDRCSTIFI-GGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDYTLPSDKFPIGFK 555
Query: 640 FSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK 699
F+ D NFP G R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP TAKAIA
Sbjct: 556 FNCDDPNFPVDGLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKS 615
Query: 700 CHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNKELVF 738
I+SE + + V GT+LR++ ++L +IL + E+VF
Sbjct: 616 VGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVIHGTELRELNSDQLDEILRYHTEIVF 675
Query: 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMIL 798
ARTSP QKL IVE Q + IVAVTGDGVND+PALKKADIG+AMGI GS+VSKQ ADMIL
Sbjct: 676 ARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 735
Query: 799 MDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCI 858
+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+ TVT+LCI
Sbjct: 736 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCI 795
Query: 859 DLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYF 918
DLGTDM PA+SLAYE PES+IM R+PR+P D+LV R+L++ AY +G+++ AGF YF
Sbjct: 796 DLGTDMVPAISLAYEAPESDIMKRQPRDPYRDNLVNRRLISMAYGQIGMIQAAAGFFVYF 855
Query: 919 HVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+M + G+ P+ L IRK W+S N+L DSY + WT +R
Sbjct: 856 VIMAENGFLPLHLFGIRKQWDSKAINDLRDSYGQEWTYNDR 896
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859885|ref|XP_003705422.1| PREDICTED: sodium/potassium-transporting ATPase subunit alpha-like isoform 2 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/881 (52%), Positives = 600/881 (68%), Gaps = 28/881 (3%)
Query: 104 LRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYV 163
L DLK E+DID H I EELY THP+ GLS + K LE+DGPNSL +
Sbjct: 16 LDDLKQELDIDFHKITPEELYQRFQTHPENGLSHAKAKENLERDGPNSLTPPKQTPEWVK 75
Query: 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223
+F GF+ LLW GA+L F+AY ++A T+E+ DNL+LGI+LA IVTG+FS+YQE
Sbjct: 76 FCKNLFGGFALLLWIGAILCFIAYSIQATTSEDPNDDNLYLGIVLAAVVIVTGIFSYYQE 135
Query: 224 RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283
KSS I ESF M+P ATVIR G + + LV GD+V +K GD++PADIR+IE +
Sbjct: 136 SKSSKIMESFKNMVPQFATVIREGEKLTLRAEELVLGDVVEVKFGDRIPADIRIIESRGF 195
Query: 284 KAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
K +NSSLTGE EP + + TN +E++NL FFSTN V G+ KGVVI G TVMG+IA
Sbjct: 196 KVDNSSLTGESEPQSRSPEFTNENPLETKNLAFFSTNAVEGTAKGVVICCGDQTVMGRIA 255
Query: 344 GLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403
GL + L+ TPI +E+ HF+ LI+ A+ LG F++A +GY+WL+A +++IGIIVAN
Sbjct: 256 GLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFIIAFILGYHWLDAVIFLIGIIVAN 315
Query: 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHL 463
VPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV H+
Sbjct: 316 VPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 375
Query: 464 SFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522
F+ +I D +Q T+ +K L + A LC++AEF+P QD IP+ +R+ +GDA
Sbjct: 376 WFDNQIIEADTTEDQSGLQYDRTSPGFKALAKIATLCNRAEFKPGQDEIPILKREVNGDA 435
Query: 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-KYFLLMKGAP 579
+E +L ++ + + +R KV E+PFNS NK+ +++H S P + ++ L+MKGAP
Sbjct: 436 SEAALLKCMELALGDVMGIRKRNKKVCEIPFNSTNKYQVSIHESDNPDDPRHLLVMKGAP 495
Query: 580 EVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK 639
E I++RC+T+ KE L E K + GERVL F D L + FP+ FK
Sbjct: 496 ERILDRCSTIFI-GGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDYTLPSDKFPIGFK 554
Query: 640 FSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK 699
F+ D NFP G R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP TAKAIA
Sbjct: 555 FNCDDPNFPVDGLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKS 614
Query: 700 CHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNKELVF 738
I+SE + + V GT+LR++ ++L +IL + E+VF
Sbjct: 615 VGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVIHGTELRELNSDQLDEILRYHTEIVF 674
Query: 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMIL 798
ARTSP QKL IVE Q + IVAVTGDGVND+PALKKADIG+AMGI GS+VSKQ ADMIL
Sbjct: 675 ARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 734
Query: 799 MDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCI 858
+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+ TVT+LCI
Sbjct: 735 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCI 794
Query: 859 DLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYF 918
DLGTDM PA+SLAYE PES+IM R+PR+P D+LV R+L++ AY +G+++ AGF YF
Sbjct: 795 DLGTDMVPAISLAYEAPESDIMKRQPRDPYRDNLVNRRLISMAYGQIGMIQAAAGFFVYF 854
Query: 919 HVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+M + G+ P+ L IRK W+S N+L DSY + WT +R
Sbjct: 855 VIMAENGFLPLHLFGIRKQWDSKAINDLRDSYGQEWTYNDR 895
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|407731616|gb|AFU25694.1| Na+,K+ ATPase alpha-subunit 1 [Trichordestra legitima] | Back alignment and taxonomy information |
|---|
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/888 (52%), Positives = 601/888 (67%), Gaps = 28/888 (3%)
Query: 97 KEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKY 156
K+ L DLK E+DID H + EELY THP+ GLS + K LE+DGPN+L
Sbjct: 38 KKRKAGDLDDLKQELDIDFHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPK 97
Query: 157 RINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTG 216
+ +F GF+ LLW GA+L F+AY ++A T EE DNL+LGI+LA IVTG
Sbjct: 98 QTPEWVKFCKNLFGGFALLLWIGAILCFIAYGIQASTVEEPADDNLYLGIVLAAVVIVTG 157
Query: 217 MFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIR 276
+FS+YQE KSS I ESF M+P ATVIR G + + LV GDIV +K GD++PADIR
Sbjct: 158 IFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDIVEVKFGDRIPADIR 217
Query: 277 LIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSN 336
+IE + K +NSSLTGE EP + T+ +E++NL FFSTN V G+ KGVVI G N
Sbjct: 218 IIEARGFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVICCGDN 277
Query: 337 TVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYV 396
TVMG+IAGL + L+ TPI +E+ HF+ LI+ A+ LG F++A +GY+WL+A +++
Sbjct: 278 TVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFL 337
Query: 397 IGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQN 456
IGIIVANVPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN
Sbjct: 338 IGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 397
Query: 457 KMTVLHLSFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRE 515
+MTV H+ F+ +I D +Q T+ +K L + A LC++AEF+ QD +P+ +
Sbjct: 398 RMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALAKIATLCNRAEFKGGQDGVPILK 457
Query: 516 RKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-KYF 572
++ +GDA+E +L ++ + + +R KV E+PFNS NK+ ++VH S P + ++
Sbjct: 458 KEVAGDASEAALLKCMELALGDVLSIRKRNKKVCEIPFNSTNKYQVSVHESDDPSDPRHL 517
Query: 573 LLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQN 632
L+MKGAPE I+ERC+T+ KE L E K + GERVL F DL L +
Sbjct: 518 LVMKGAPERILERCSTIFI-GGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDLQLPSD 576
Query: 633 NFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCT 692
+P+ +KF+TD NFP R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP T
Sbjct: 577 KYPIGYKFNTDDPNFPLDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPIT 636
Query: 693 AKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDILE 731
AKAIA I+SE + + V GT+LR++ ++L +IL+
Sbjct: 637 AKAIAKSVGIISEGNETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSDQLDEILK 696
Query: 732 TNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSK 791
+ E+VFARTSP QKL IVE Q L IVAVTGDGVND+PALKKADIG+AMGI GS+VSK
Sbjct: 697 YHTEIVFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 756
Query: 792 QTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVS 851
Q ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+
Sbjct: 757 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLG 816
Query: 852 TVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETL 911
TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP TD LV +L++ AY +G+++
Sbjct: 817 TVTILCIDLGTDMVPAISLAYEEAESDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAA 876
Query: 912 AGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
AGF YF +M + G+ PM L IRK W+S N+L DSY + WT +R
Sbjct: 877 AGFFVYFVIMAENGFLPMHLFGIRKQWDSKAINDLTDSYGQEWTYRDR 924
|
Source: Trichordestra legitima Species: Trichordestra legitima Genus: Trichordestra Family: Noctuidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|407731562|gb|AFU25667.1| Na+,K+ ATPase alpha-subunit 1 [Papilio glaucus] | Back alignment and taxonomy information |
|---|
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/888 (51%), Positives = 601/888 (67%), Gaps = 28/888 (3%)
Query: 97 KEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKY 156
K+ L DLK E+DID H + EELY THP+ GLS + K LE+DGPN+L
Sbjct: 38 KKRKPGDLDDLKQELDIDYHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPK 97
Query: 157 RINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTG 216
+ +F GF+ LLW GA+L F+AY ++A T EE DNL+LGI+LA IVTG
Sbjct: 98 QTPEWVKFCKNLFGGFALLLWIGAILCFIAYGIQASTVEEPADDNLYLGIVLAAVVIVTG 157
Query: 217 MFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIR 276
+FS+YQE KSS I ESF M+P ATVIR G + + LV GDIV +K GD++PADIR
Sbjct: 158 IFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDIVEVKFGDRIPADIR 217
Query: 277 LIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSN 336
+IE + K +NSSLTGE EP + TN +E++NL FFSTN V G+ KG+VI G N
Sbjct: 218 IIESRGFKVDNSSLTGESEPQSRGAEFTNENPLETKNLAFFSTNAVEGTAKGIVICCGDN 277
Query: 337 TVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYV 396
TVMG+IAGL + L+ TPI +E+ HF+ LI+ A+ LG F++A +GY+WL+A +++
Sbjct: 278 TVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFL 337
Query: 397 IGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQN 456
IGIIVANVPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN
Sbjct: 338 IGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 397
Query: 457 KMTVLHLSFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRE 515
+MTV H+ F+ +I D +Q T+ +K L + A LC++AEF+ QD +P+ +
Sbjct: 398 RMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALAKIATLCNRAEFKGGQDGVPILK 457
Query: 516 RKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-KYF 572
++ +GDA+E +L ++ + + +R KV E+PFNS NK+ +++H S P + ++
Sbjct: 458 KEVAGDASEAALLKCMELALGDVMSIRKRNKKVCEIPFNSTNKYQVSIHESDDPSDPRHL 517
Query: 573 LLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQN 632
L+MKGAPE I+ERC+T+ KE L E K + GERVL F DL L +
Sbjct: 518 LVMKGAPERILERCSTIFI-GGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDLQLPSD 576
Query: 633 NFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCT 692
+P+ +KF+TD NFP R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP T
Sbjct: 577 KYPIGYKFNTDDPNFPLDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPIT 636
Query: 693 AKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDILE 731
AKAIA I+SE + + V GT+LR++ ++L +IL+
Sbjct: 637 AKAIAKSVGIISEGNETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSDQLDEILK 696
Query: 732 TNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSK 791
+ E+VFARTSP QKL IVE Q L IVAVTGDGVND+PALKKADIG+AMGI GS+VSK
Sbjct: 697 FHTEIVFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 756
Query: 792 QTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVS 851
Q ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+
Sbjct: 757 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLG 816
Query: 852 TVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETL 911
TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP TD LV +L++ AY +G+++
Sbjct: 817 TVTILCIDLGTDMVPAISLAYEEAESDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAA 876
Query: 912 AGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
AGF YF +M + G+ P+ L IRK W+S N+L DSY + WT +R
Sbjct: 877 AGFFVYFVIMAENGFLPLKLFGIRKQWDSKAINDLTDSYGQEWTYRDR 924
|
Source: Papilio glaucus Species: Papilio glaucus Genus: Papilio Family: Papilionidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307177456|gb|EFN66583.1| Sodium/potassium-transporting ATPase subunit alpha [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/881 (52%), Positives = 599/881 (67%), Gaps = 28/881 (3%)
Query: 104 LRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYV 163
L DLK E+DID H I EELY THP+ GLS + K LE+DGPN+L +
Sbjct: 16 LDDLKQELDIDFHKISPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVK 75
Query: 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223
+F GF+ LLW GA+L F+AY ++A T+E+ DNL+LGI+LA IVTG+FS+YQE
Sbjct: 76 FCKNLFGGFALLLWIGAILCFIAYSIQATTSEDPNDDNLYLGIVLAAVVIVTGIFSYYQE 135
Query: 224 RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283
KSS I ESF M+P ATVIR G + + LV GD+V +K GD++PADIR+IE +
Sbjct: 136 SKSSKIMESFKNMVPQFATVIREGEKVTLRAEDLVLGDVVDVKFGDRIPADIRIIESRGF 195
Query: 284 KAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
K +NSSLTGE EP + + TN +E++NL FFSTN V G+ KGVVI G TVMG+IA
Sbjct: 196 KVDNSSLTGESEPQSRSPEFTNENPLETKNLAFFSTNAVEGTAKGVVICCGDQTVMGRIA 255
Query: 344 GLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403
GL + L+ TPI +E+ HF+ LI+ A+ LG F++A +GY+WL+A +++IGIIVAN
Sbjct: 256 GLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGIIVAN 315
Query: 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHL 463
VPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV H+
Sbjct: 316 VPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 375
Query: 464 SFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522
F+ +I D +Q T+ +K L + A LC++AEF+P Q+ P+ +R+ +GDA
Sbjct: 376 WFDNQIIDADTTEDQSGLQYDRTSPGFKALAKIATLCNRAEFKPGQEGEPILKREVNGDA 435
Query: 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP---LNKYFLLMKGAP 579
+E +L ++ + + +R KV E+PFNS NK+ ++VH S ++Y L+MKGAP
Sbjct: 436 SEAALLKCMELALGDVMGIRKRNKKVCEIPFNSTNKYQVSVHESDDPNDSRYLLVMKGAP 495
Query: 580 EVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK 639
E I++RC+T+ KE L E K + GERVL F D L + FPV FK
Sbjct: 496 ERILDRCSTIFI-GGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDFILPSDKFPVGFK 554
Query: 640 FSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK 699
F++D NFP G R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP TAKAIA
Sbjct: 555 FNSDDANFPVEGLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKS 614
Query: 700 CHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNKELVF 738
I+SE + + V GT+LR++ ++L +IL + E+VF
Sbjct: 615 VGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVVHGTELRELNSDQLDEILRYHTEIVF 674
Query: 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMIL 798
ARTSP QKL IVE Q + IVAVTGDGVND+PALKKADIG+AMGI GS+VSKQ ADMIL
Sbjct: 675 ARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 734
Query: 799 MDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCI 858
+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+ TVT+LCI
Sbjct: 735 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCI 794
Query: 859 DLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYF 918
DLGTDM PA+SLAYE PES+IM R+PR+P D+LV R+L++ AY +G+++ AGF YF
Sbjct: 795 DLGTDMVPAISLAYEAPESDIMKRQPRDPYRDNLVNRRLISMAYGQIGMIQAAAGFFVYF 854
Query: 919 HVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+M + G+ P+ L IRK W+S N+L DSY + WT +R
Sbjct: 855 VIMAENGFLPLYLFGIRKQWDSKAINDLTDSYGQEWTYRDR 895
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|407731570|gb|AFU25671.1| Na+,K+ ATPase alpha-subunit 1 [Cyrtepistomus castaneus] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/883 (51%), Positives = 601/883 (68%), Gaps = 28/883 (3%)
Query: 102 AQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNV 161
L DLK E+DID H I EELY THP+ GLS + K LE+DGPN+L
Sbjct: 50 GDLDDLKQELDIDYHKITPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKTTPEW 109
Query: 162 YVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFY 221
+F GF+ LLW GA+L F+AY ++A T EE DNL+LG++LA IVTG+FS+Y
Sbjct: 110 VKFCKNLFGGFALLLWIGAILCFIAYGIQASTVEEPADDNLFLGVVLAAVVIVTGIFSYY 169
Query: 222 QERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ 281
QE KSS I ESF M+P ATV+R G + + LV GD+V +K GD++PAD+R+IE +
Sbjct: 170 QESKSSKIMESFKNMVPQFATVLREGEKLTLRAEDLVLGDVVEVKFGDRIPADVRIIESR 229
Query: 282 DLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGK 341
K +NSSLTGE EP + + T+ +E++NL FFSTN V G+ KGVVI G NTVMG+
Sbjct: 230 GFKVDNSSLTGESEPQSRSPEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDNTVMGR 289
Query: 342 IAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIV 401
IAGL + L+ TPI +E+ HF+ LI+ A+ LG F++A +GY+WL+A +++IGIIV
Sbjct: 290 IAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGIIV 349
Query: 402 ANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVL 461
ANVPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV
Sbjct: 350 ANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVA 409
Query: 462 HLSFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASG 520
H+ F+ +I D +Q T+ +K L R A LC++AEF+P QD++P+ +R+ +G
Sbjct: 410 HMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKPGQDSVPILKREVNG 469
Query: 521 DATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-KYFLLMKG 577
DA+E +L ++ + + +R KV EVPFNS NK+ ++VH + P + ++ L+MKG
Sbjct: 470 DASEAALLKCMELALGDVMSIRRKNKKVCEVPFNSTNKYQVSVHENEDPNDPRHILVMKG 529
Query: 578 APEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVN 637
APE I+ERC T+ KE L E K + GERVL F D L + +P+
Sbjct: 530 APERILERCNTIFI-CGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDSLLPSDKYPIG 588
Query: 638 FKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA 697
+KF++D NFP G R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP TAKAIA
Sbjct: 589 YKFNSDDPNFPLDGLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIA 648
Query: 698 IKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNKEL 736
I+SE + + V G+DLR+++ ++L +IL + E+
Sbjct: 649 KSVGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVVHGSDLRELSSDQLDEILRYHTEI 708
Query: 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM 796
VFARTSP QKL IVE Q + IVAVTGDGVND+PALKKADIG+AMGI GS+VSKQ ADM
Sbjct: 709 VFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 768
Query: 797 ILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVL 856
IL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+ TVT+L
Sbjct: 769 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTIL 828
Query: 857 CIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLT 916
CIDLGTDM PA+SLAYE PES+IM R+PR+P D+LV R+L++ AY +G+++ AGF
Sbjct: 829 CIDLGTDMVPAISLAYEAPESDIMKRQPRDPYRDNLVNRRLISMAYGQIGMIQAAAGFFV 888
Query: 917 YFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
YF +M + G+ PM L IRK W+S N+L DSY + WT +R
Sbjct: 889 YFVIMAENGFLPMKLFGIRKHWDSKAINDLSDSYGQEWTYKDR 931
|
Source: Cyrtepistomus castaneus Species: Cyrtepistomus castaneus Genus: Cyrtepistomus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|407731614|gb|AFU25693.1| Na+,K+ ATPase alpha-subunit 1A, partial [Rhyssomatus lineaticollis] | Back alignment and taxonomy information |
|---|
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/890 (51%), Positives = 601/890 (67%), Gaps = 28/890 (3%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
++K L DLK E+DID H I EELY THP+ GLS + K LE+DGPN+L
Sbjct: 6 QKKARKAGDLDDLKQELDIDYHKITPEELYQRFQTHPENGLSHAKAKENLERDGPNALTP 65
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GF+ LLW GA+L F+AY + A T EE DNL+LG++LA IV
Sbjct: 66 PKTTPEWVKFCKNLFGGFALLLWIGAILCFIAYGITASTVEEPSDDNLFLGVVLAAVVIV 125
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG+FS+YQE KSS I ESF M+P ATV+R G + + LV GD+V +K GD++PAD
Sbjct: 126 TGIFSYYQESKSSKIMESFKNMVPQFATVLREGEKLTLRAEDLVLGDVVEVKFGDRIPAD 185
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
IR+IE + K +NSSLTGE EP + + T+ +E++NL FFSTN V G+ KGVVI G
Sbjct: 186 IRIIESRGFKVDNSSLTGESEPQSRSPEFTHENPLETKNLAFFSTNAVEGTAKGVVISCG 245
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
NTVMG+IAGL + L+ TPI +E+ HF+ LI+ A+ LG FL+A +GY+WL+A +
Sbjct: 246 DNTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAMFLGVTFFLIAFILGYHWLDAVI 305
Query: 395 YVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 306 FLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLT 365
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I D +Q T+ +K L R A LC++AEF+P QDN+P+
Sbjct: 366 QNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIAALCNRAEFKPGQDNVPI 425
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-K 570
+R+ +GDA+E +L ++ + + +R K+ EVPFNS NK+ ++VH + P + +
Sbjct: 426 LKREVNGDASEAALLKCMELALGDVMSIRRKNKKICEVPFNSTNKYQVSVHENEDPNDPR 485
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I+ERC+T+ KE L E K + GERVL F D L
Sbjct: 486 HILVMKGAPERILERCSTIFI-CGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDFMLP 544
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
+ +P+ +KF++D NFP G R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 545 TDKYPIGYKFNSDDPNFPLDGLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHP 604
Query: 691 CTAKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDI 729
TAKAIA I+SE + + V G+DLR ++ ++L +I
Sbjct: 605 ITAKAIAKSVGIISEGNETVEDIGQRLNIPVSEVNPREAKAAVIHGSDLRDLSSDQLDEI 664
Query: 730 LETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEV 789
L + E+VFARTSP QKL IVE Q + IVAVTGDGVND+PALKKADIG+AMGI GS+V
Sbjct: 665 LRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 724
Query: 790 SKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLP 849
SKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP
Sbjct: 725 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLP 784
Query: 850 VSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILE 909
+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R PR+P+ D LV +L++ AY +G+++
Sbjct: 785 LGTVTILCIDLGTDMVPAISLAYEEAESDIMKRPPRDPKNDKLVNDRLISMAYGQIGMIQ 844
Query: 910 TLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
AGF YF +M + G+ PM L IRK W+S N+L DSY + WT +R
Sbjct: 845 AAAGFFVYFVIMAENGFLPMKLFGIRKQWDSKAINDLPDSYGQEWTYKDR 894
|
Source: Rhyssomatus lineaticollis Species: Rhyssomatus lineaticollis Genus: Rhyssomatus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322788172|gb|EFZ13954.1| hypothetical protein SINV_06202 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/881 (52%), Positives = 599/881 (67%), Gaps = 28/881 (3%)
Query: 104 LRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYV 163
L DLK E+DID H I EELY THP+ GLS + K LE+DGPN+L +
Sbjct: 57 LDDLKQELDIDFHKISPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVK 116
Query: 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223
+F GF+ LLW GA+L F+AY ++A T+E+ DNL+LGI+LA IVTG+FS+YQE
Sbjct: 117 FCKNLFGGFALLLWIGAILCFIAYSIQATTSEDPNDDNLYLGIVLAAVVIVTGIFSYYQE 176
Query: 224 RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283
KSS I ESF M+P ATVIR G + + LV GD+V +K GD++PADIR+IE +
Sbjct: 177 SKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARGF 236
Query: 284 KAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
K +NSSLTGE EP + + TN +E++NL FFSTN V G+ KGVVI G TVMG+IA
Sbjct: 237 KVDNSSLTGESEPQSRSPEFTNENPLETKNLAFFSTNAVEGTAKGVVICCGDQTVMGRIA 296
Query: 344 GLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403
GL + L+ TPI +E+ HF+ LI+ A+ LG F++A +GY+WL+A +++IGIIVAN
Sbjct: 297 GLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGIIVAN 356
Query: 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHL 463
VPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN+MTV H+
Sbjct: 357 VPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 416
Query: 464 SFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522
F+ +I D +Q T+ +K L + A LC++AEF+P QD P+ +R+ +GDA
Sbjct: 417 WFDNQIIDADTTEDQSGLQYDRTSPGFKALAKIATLCNRAEFKPGQDGEPILKREVNGDA 476
Query: 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-KYFLLMKGAP 579
+E +L ++ + + +R KV E+PFNS NK+ +++H S P + ++ L+MKGAP
Sbjct: 477 SEAALLKCMELALGDVMGIRKRNKKVCEIPFNSTNKYQVSIHESDDPNDPRHLLVMKGAP 536
Query: 580 EVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK 639
E I++RC+T+ KE L E K + GERVL F D L + FPV FK
Sbjct: 537 ERILDRCSTIFI-GGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDYILPSDKFPVGFK 595
Query: 640 FSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK 699
F+ D +NFP G R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP TAKAIA
Sbjct: 596 FNADDLNFPVDGLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKS 655
Query: 700 CHILSETS---------------------SDDNVFTGTDLRKITDEELKDILETNKELVF 738
I+SE + + V GT+LR++ ++L +IL + E+VF
Sbjct: 656 VGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVIHGTELRELNSDQLDEILRYHTEIVF 715
Query: 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMIL 798
ARTSP QKL IVE Q + IVAVTGDGVND+PALKKADIG+AMGI GS+VSKQ ADMIL
Sbjct: 716 ARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL 775
Query: 799 MDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCI 858
+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+ TVT+LCI
Sbjct: 776 LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCI 835
Query: 859 DLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYF 918
DLGTDM PA+SLAYE+ ES+IM R+PRNP TD LV +L++ AY +G+++ AGF YF
Sbjct: 836 DLGTDMVPAISLAYEEAESDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAAAGFFVYF 895
Query: 919 HVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
+M + G+ P+ L IRK W+S N+L DSY + WT +R
Sbjct: 896 VIMAENGFLPLYLFGIRKQWDSKAINDLTDSYGQEWTYRDR 936
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|407731586|gb|AFU25679.1| Na+,K+ ATPase alpha-subunit 1 [Lophocampa caryae] | Back alignment and taxonomy information |
|---|
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/888 (51%), Positives = 599/888 (67%), Gaps = 28/888 (3%)
Query: 97 KEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKY 156
K+ L DLK E+DID H + EELY THP+ GLS + K LE+DGPN+L
Sbjct: 43 KKRKAGDLDDLKQELDIDFHKVTPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPK 102
Query: 157 RINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTG 216
+ +F GF+ LLW GA+L F+AY + A T EE DNL+LGI+LA IVTG
Sbjct: 103 QTPEWVKFCKNLFGGFALLLWIGAILCFIAYGILASTVEEPADDNLYLGIVLAAVVIVTG 162
Query: 217 MFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIR 276
+FS+YQE KSS I ESF M+P ATVIR G + + LV GDIV +K GD++PADIR
Sbjct: 163 IFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDIVEVKFGDRIPADIR 222
Query: 277 LIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSN 336
+IE + K +NSSLTGE EP + TN +E++NL FFSTN V G+ KG+VI G N
Sbjct: 223 IIEARGFKVDNSSLTGESEPQSRGADFTNENPLETKNLAFFSTNAVEGTAKGIVICCGDN 282
Query: 337 TVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYV 396
TVMG+IAGL + L+ TPI +E+ HF+ LI+ A+ LG FL+A +GY+WL+A +++
Sbjct: 283 TVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFLIAFILGYHWLDAVIFL 342
Query: 397 IGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQN 456
IGIIVANVPEGLLAT+TV LTLTAKR+ASKNC+V+ L+ VETLGS TIC+DKTGTLTQN
Sbjct: 343 IGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 402
Query: 457 KMTVLHLSFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRE 515
+MTV H+ F+ +I D +Q T+ +K L + A LC++AEF+ QD +P+ +
Sbjct: 403 RMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALAKIATLCNRAEFKGGQDGVPILK 462
Query: 516 RKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS--PLN-KYF 572
++ +GDA+E +L ++ + + +R K E+PFNS NK+ +++H S P + ++
Sbjct: 463 KEVAGDASEAALLKCMELALGDVLSIRKRNKKACEIPFNSTNKYQISIHESDDPSDPRHL 522
Query: 573 LLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQN 632
L+MKGAPE I+ERC+T+ KE L E K + GERVL F DL L +
Sbjct: 523 LVMKGAPERILERCSTIFI-GGKEKVLDEEMKEAFNNAYLELGGLGERVLGFCDLQLPSD 581
Query: 633 NFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCT 692
+P+ +KF+TD NFP R +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP T
Sbjct: 582 KYPIGYKFNTDDPNFPLDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPIT 641
Query: 693 AKAIAIKCHILSETS---------------------SDDNVFTGTDLRKITDEELKDILE 731
AKAIA I+SE + + V GT+LR++ ++L +IL+
Sbjct: 642 AKAIAKSVGIISEGNETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSDQLDEILK 701
Query: 732 TNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSK 791
+ E+VFARTSP QKL IVE Q L IVAVTGDGVND+PALKKADIG+AMGI GS+VSK
Sbjct: 702 FHTEIVFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 761
Query: 792 QTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVS 851
Q ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP+
Sbjct: 762 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLG 821
Query: 852 TVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETL 911
TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP TD LV +L++ AY +G+++
Sbjct: 822 TVTILCIDLGTDMVPAISLAYEEAESDIMKRQPRNPFTDKLVNERLISMAYGQIGMIQAA 881
Query: 912 AGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTER 957
AGF YF +M + G+ P+ L IRK W+S N+L DSY + WT +R
Sbjct: 882 AGFFVYFVIMAENGFLPLKLFGIRKMWDSKAINDLTDSYGQEWTYRDR 929
|
Source: Lophocampa caryae Species: Lophocampa caryae Genus: Lophocampa Family: Arctiidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 961 | ||||||
| FB|FBgn0002921 | 1041 | Atpalpha "Na pump alpha subuni | 0.639 | 0.590 | 0.468 | 3.4e-226 | |
| UNIPROTKB|Q8AY58 | 1023 | ATP1A1 "Sodium/potassium ATPas | 0.633 | 0.595 | 0.452 | 9.2e-224 | |
| MGI|MGI:88105 | 1023 | Atp1a1 "ATPase, Na+/K+ transpo | 0.629 | 0.591 | 0.456 | 8.3e-223 | |
| RGD|2167 | 1023 | Atp1a1 "ATPase, Na+/K+ transpo | 0.629 | 0.591 | 0.456 | 8.3e-223 | |
| UNIPROTKB|P18907 | 1021 | ATP1A1 "Sodium/potassium-trans | 0.629 | 0.592 | 0.456 | 1.1e-222 | |
| UNIPROTKB|Q7ZYV1 | 1023 | ATP1A1 "Na+/K+ ATPase alpha 1 | 0.628 | 0.590 | 0.457 | 1.7e-222 | |
| UNIPROTKB|F1SAX3 | 1020 | ATP1A1 "Sodium/potassium-trans | 0.629 | 0.593 | 0.455 | 2.8e-222 | |
| UNIPROTKB|F5H3A1 | 1023 | ATP1A1 "Sodium/potassium-trans | 0.629 | 0.591 | 0.453 | 4.6e-222 | |
| UNIPROTKB|P05023 | 1023 | ATP1A1 "Sodium/potassium-trans | 0.629 | 0.591 | 0.453 | 4.6e-222 | |
| UNIPROTKB|Q5RDR3 | 1023 | ATP1A1 "Sodium/potassium-trans | 0.629 | 0.591 | 0.453 | 4.6e-222 |
| FB|FBgn0002921 Atpalpha "Na pump alpha subunit" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1441 (512.3 bits), Expect = 3.4e-226, Sum P(2) = 3.4e-226
Identities = 293/625 (46%), Positives = 403/625 (64%)
Query: 85 SKKSILRFIHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRL 144
S++ + ++K++ +D DLK E+DID H I EELY THP+ GLS + K L
Sbjct: 36 SRRKMPAKVNKKENLD-----DLKQELDIDFHKISPEELYQRFQTHPENGLSHAKAKENL 90
Query: 145 EKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWL 204
E+DGPN+L + +F GF+ LLW GA+L F+AY ++A T+EE DNL+L
Sbjct: 91 ERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQASTSEEPADDNLYL 150
Query: 205 GIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVL 264
GI+L+ IVTG+FS+YQE KSS I ESF M+P ATVIR G + + LV GD+V
Sbjct: 151 GIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVE 210
Query: 265 LKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSG 324
+K GD++PADIR+IE ++ K +NSSLTGE EP + T+ +E++NL FFSTN V G
Sbjct: 211 VKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEG 270
Query: 325 SGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALY 384
+ KGVVI G +TVMG+IAGL + L+ TPI +E+ HF+ LI+ A+ LG F++A
Sbjct: 271 TAKGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFI 330
Query: 385 IGYNWLNACVYVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRT 444
+GY+WL+A +++IGIIVANVPEG KR+ASKNC+V+ L+ VETLGS T
Sbjct: 331 LGYHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTST 390
Query: 445 ICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVD-IQNFETNTTYKTLVRAACLCSKAE 503
IC+DKTGTLTQN+MTV H+ F+ +I D +Q T+ +K L R A LC++AE
Sbjct: 391 ICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAE 450
Query: 504 FEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTV 563
F+ QD +P+ +++ SGDA+E +L ++ + + ++R K+ EVPFNS NK+ +++
Sbjct: 451 FKGGQDGVPILKKEVSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSI 510
Query: 564 HFSP-LN--KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGER 620
H + N +Y L+MKGAPE I+ERC+T+ KE L E K + GER
Sbjct: 511 HETEDTNDPRYLLVMKGAPERILERCSTIFING-KEKVLDEEMKEAFNNAYMELGGLGER 569
Query: 621 VLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGI 680
VL F D L + +P FKF+TD +NFP R +GL+S+ DPPR AVPDA+ C AGI
Sbjct: 570 VLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGI 629
Query: 681 RVIMVTGDHPCTAKAIAIKCHILSE 705
+VIMVTGDHP TAKAIA I+SE
Sbjct: 630 KVIMVTGDHPITAKAIAKSVGIISE 654
|
|
| UNIPROTKB|Q8AY58 ATP1A1 "Sodium/potassium ATPase alpha subunit isoform 1" [Fundulus heteroclitus (taxid:8078)] | Back alignment and assigned GO terms |
|---|
Score = 1381 (491.2 bits), Expect = 9.2e-224, Sum P(2) = 9.2e-224
Identities = 278/614 (45%), Positives = 394/614 (64%)
Query: 96 EKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQK 155
+KE + +LK EVD+D+H + L+EL+ T RGLS K L +DGPN+L
Sbjct: 24 KKEKKKMDMDELKKEVDLDDHKLTLDELHRKYGTDLSRGLSSSRAKDILARDGPNALTPP 83
Query: 156 YRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVT 215
+F GFS LLW GA+L FLAY ++A + +E DNL+LGI+L+ I+T
Sbjct: 84 PTTPEWVKFCKQLFGGFSMLLWIGAILCFLAYGIQAASEDEPANDNLYLGIVLSAVVIIT 143
Query: 216 GMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADI 275
G FS+YQE KSS I ESF ++P +A V+R+G I++ +V GD+V +K GD++PAD+
Sbjct: 144 GCFSYYQEAKSSKIMESFKNLVPQQALVVRDGEKNSINAEEVVAGDLVEVKGGDRIPADL 203
Query: 276 RLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGS 335
R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN + G+ +G+VI TG
Sbjct: 204 RIISSHGCKVDNSSLTGESEPQTRSPDFTNDNPLETRNIAFFSTNCIEGTARGIVINTGD 263
Query: 336 NTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVY 395
TVMG+IA L + L+ TPI +E++HF+ +I+ A+ LGA F+L+L +GY WL A ++
Sbjct: 264 RTVMGRIATLASSLDGGKTPIAKEIEHFIHIITGVAVFLGASFFILSLILGYGWLEAVIF 323
Query: 396 VIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQ 455
+IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLTQ
Sbjct: 324 LIGIIVANVPEGLLATVTVCLTLTAKRMAKKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 383
Query: 456 NKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPMR 514
N+MTV H+ F+ +I+ + +F+ +++T+ L R A LC++A F Q+N+P+
Sbjct: 384 NRMTVAHMWFDNQIHEADTTENQSGTSFDRSSSTWAALARVAGLCNRAVFLAEQNNVPIL 443
Query: 515 ERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPL---NKY 571
+R +GDA+E +L I+ S++D+R+ +PKV E+PFNS NK+ L++H + K+
Sbjct: 444 KRDVAGDASEAALLKCIELCCGSVKDMRDKYPKVAEIPFNSTNKYQLSIHKNATPGETKH 503
Query: 572 FLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQ 631
L+MKGAPE I++RC+T++ + KE L E K ++ GERVL F HL
Sbjct: 504 LLVMKGAPERILDRCSTIVLQG-KEQPLDDEMKDSFQNAYVELGGLGERVLGFCHFHLPD 562
Query: 632 NNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPC 691
+ FP F F D +NFP+ IGL+++ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 563 DQFPEGFAFDADEVNFPTENLCFIGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 622
Query: 692 TAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 623 TAKAIAKGVGIISE 636
|
|
| MGI|MGI:88105 Atp1a1 "ATPase, Na+/K+ transporting, alpha 1 polypeptide" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1366 (485.9 bits), Expect = 8.3e-223, Sum P(2) = 8.3e-223
Identities = 281/615 (45%), Positives = 390/615 (63%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
KE++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 28 KERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTPARAAEILARDGPNALTP 82
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY + + T EE P D+L+LG++L+ I+
Sbjct: 83 PPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIRSATEEEPPNDDLYLGVVLSAVVII 142
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 143 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEDVVVGDLVEVKGGDRIPAD 202
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 203 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 262
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI +E++HF+ LI+ A+ LG F+L+L + Y WL A +
Sbjct: 263 DRTVMGRIATLASGLEGGQTPIAEEIEHFIHLITGVAVFLGVSFFILSLILEYTWLEAVI 322
Query: 395 YVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 323 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 382
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + +F+ T+ T+ L R A LC++A F+ NQ+N+P+
Sbjct: 383 QNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWFALSRIAGLCNRAVFQANQENLPI 442
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---K 570
+R +GDA+E +L I+ S+ ++R + K+ E+PFNS NK+ L++H +P K
Sbjct: 443 LKRAVAGDASESALLKCIEVCCGSVMEMREKYSKIVEIPFNSTNKYQLSIHKNPNASEPK 502
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 503 HLLVMKGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLLLP 561
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 562 DEQFPEGFQFDTDDVNFPVDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 621
Query: 691 CTAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 622 ITAKAIAKGVGIISE 636
|
|
| RGD|2167 Atp1a1 "ATPase, Na+/K+ transporting, alpha 1 polypeptide" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1366 (485.9 bits), Expect = 8.3e-223, Sum P(2) = 8.3e-223
Identities = 281/615 (45%), Positives = 390/615 (63%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
KE++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 28 KERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTPARAAEILARDGPNALTP 82
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY + + T EE P D+L+LG++L+ I+
Sbjct: 83 PPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIRSATEEEPPNDDLYLGVVLSAVVII 142
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 143 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEDVVVGDLVEVKGGDRIPAD 202
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 203 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 262
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI +E++HF+ LI+ A+ LG F+L+L + Y WL A +
Sbjct: 263 DRTVMGRIATLASGLEGGQTPIAEEIEHFIHLITGVAVFLGVSFFILSLILEYTWLEAVI 322
Query: 395 YVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 323 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 382
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + +F+ T+ T+ L R A LC++A F+ NQ+N+P+
Sbjct: 383 QNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWFALSRIAGLCNRAVFQANQENLPI 442
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---K 570
+R +GDA+E +L I+ S+ ++R + K+ E+PFNS NK+ L++H +P K
Sbjct: 443 LKRAVAGDASESALLKCIEVCCGSVMEMREKYTKIVEIPFNSTNKYQLSIHKNPNASEPK 502
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 503 HLLVMKGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLLLP 561
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 562 DEQFPEGFQFDTDEVNFPVDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 621
Query: 691 CTAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 622 ITAKAIAKGVGIISE 636
|
|
| UNIPROTKB|P18907 ATP1A1 "Sodium/potassium-transporting ATPase subunit alpha-1" [Equus caballus (taxid:9796)] | Back alignment and assigned GO terms |
|---|
Score = 1372 (488.0 bits), Expect = 1.1e-222, Sum P(2) = 1.1e-222
Identities = 281/615 (45%), Positives = 392/615 (63%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
KE++MD +LK EV +D+H + L+EL T RGL+ L +DGPN+L
Sbjct: 26 KERDMD-----ELKKEVSMDDHKLSLDELQRKYGTDLSRGLTTARAAEILARDGPNALTP 80
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 81 PPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAATEEEPQNDNLYLGVVLSAVVII 140
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A V+RNG I++ +V GD+V +K GD++PAD
Sbjct: 141 TGCFSYYQEAKSSKIMESFKNMVPQQALVVRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 200
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 201 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 260
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 261 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVTFFILSLILEYTWLEAVI 320
Query: 395 YVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 321 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 380
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + +F+ T+ T+ +L R A LC++A F+ NQ+NIP+
Sbjct: 381 QNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLSLSRIAGLCNRAVFQANQENIPI 440
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---K 570
+R +GDA+E +L I+ S++++R+ +PK+ E+PFNS NK+ L++H +P +
Sbjct: 441 LKRAVAGDASESALLKCIELCCGSVKEMRDRYPKIVEIPFNSTNKYQLSIHKNPNTSEPQ 500
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 501 HLLVMKGAPERILDRCSSILLNG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLP 559
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 560 DEQFPEGFQFDTDDVNFPLENLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 619
Query: 691 CTAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 620 ITAKAIAKGVGIISE 634
|
|
| UNIPROTKB|Q7ZYV1 ATP1A1 "Na+/K+ ATPase alpha 1 subunit" [Anas platyrhynchos (taxid:8839)] | Back alignment and assigned GO terms |
|---|
Score = 1367 (486.3 bits), Expect = 1.7e-222, Sum P(2) = 1.7e-222
Identities = 281/614 (45%), Positives = 393/614 (64%)
Query: 96 EKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQK 155
E++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 29 ERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTTARAAEILARDGPNTLTPP 83
Query: 156 YRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVT 215
+F GFS LLW GA+L FLAY +++ EE +DNL+LGI+LA I+T
Sbjct: 84 PTTPEWVKFCRQLFGGFSLLLWIGAILCFLAYGIQSVMEEEPNKDNLYLGIVLAAVVIIT 143
Query: 216 GMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADI 275
G FS+YQE KSS I ESF M+P +A V+RNG I++ G+V GD+V +K GD++PAD+
Sbjct: 144 GCFSYYQEAKSSKIMESFKNMVPQQALVVRNGEKMSINAEGVVVGDLVEVKGGDRIPADL 203
Query: 276 RLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGS 335
R+I K +NSSLTGE EP T + +N +E+RN+ FFSTN V G+ +G+VI TG
Sbjct: 204 RIISAHGCKVDNSSLTGESEPQTRSPDFSNENPLETRNIAFFSTNCVEGTARGIVIRTGD 263
Query: 336 NTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVY 395
TVMG+IA L + LE TPI E++HF+ LI+ A+ LG F+L+L + Y WL A ++
Sbjct: 264 RTVMGRIASLASGLEGGKTPIAMEIEHFIHLITGVAVFLGVSFFILSLILEYTWLEAVIF 323
Query: 396 VIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQ 455
+IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLTQ
Sbjct: 324 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 383
Query: 456 NKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPMR 514
N+MTV H+ F+ +I+ + +F+ ++ T+ L R A LC++A F+ NQ+N+P+
Sbjct: 384 NRMTVAHMWFDNQIHEADTTENQSGASFDKSSATWTALSRVAGLCNRAVFQANQENVPIL 443
Query: 515 ERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVH--FSPL-NKY 571
+R +GDA+E +L I+ S++++R +PKV E+PFNS NK+ L++H +P ++Y
Sbjct: 444 KRAVAGDASESALLKCIELCCGSVKEMRERYPKVVEIPFNSTNKYQLSIHKNANPSESRY 503
Query: 572 FLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQ 631
L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 504 LLVMKGAPERILDRCSSILLHG-KEQPLDEEMKDAFQNAYLELGGLGERVLGFCHLALPD 562
Query: 632 NNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPC 691
+ FP F+F TD +NFP +GL+S+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 563 DQFPEGFQFDTDEVNFPVDKLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 622
Query: 692 TAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 623 TAKAIAKGVGIISE 636
|
|
| UNIPROTKB|F1SAX3 ATP1A1 "Sodium/potassium-transporting ATPase subunit alpha-1" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1364 (485.2 bits), Expect = 2.8e-222, Sum P(2) = 2.8e-222
Identities = 280/615 (45%), Positives = 390/615 (63%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
KE++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 25 KERDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTPARAAEILARDGPNALTP 79
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 80 PPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAATEEEPQNDNLYLGVVLSAVVII 139
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 140 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 199
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 200 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 259
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 260 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVI 319
Query: 395 YVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 320 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 379
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + +F+ T+ T+ L R A LC++A F+ NQ+N+P+
Sbjct: 380 QNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSRIAGLCNRAVFQANQENLPI 439
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---K 570
+R +GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +P +
Sbjct: 440 LKRAVAGDASESALLKCIELCCGSVKEMRERYTKIVEIPFNSTNKYQLSIHKNPNTAEPR 499
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 500 HLLVMKGAPERILDRCSSILIHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLP 558
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 559 DEQFPEGFQFDTDDVNFPLDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 618
Query: 691 CTAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 619 ITAKAIAKGVGIISE 633
|
|
| UNIPROTKB|F5H3A1 ATP1A1 "Sodium/potassium-transporting ATPase subunit alpha-1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1363 (484.9 bits), Expect = 4.6e-222, Sum P(2) = 4.6e-222
Identities = 279/615 (45%), Positives = 390/615 (63%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
K+++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 28 KDRDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTSARAAEILARDGPNALTP 82
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 83 PPTTPEWIKFCRQLFGGFSMLLWIGAILCFLAYSIQAATEEEPQNDNLYLGVVLSAVVII 142
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 143 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 202
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 203 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 262
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 263 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVI 322
Query: 395 YVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 323 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 382
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + +F+ T+ T+ L R A LC++A F+ NQ+N+P+
Sbjct: 383 QNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSRIAGLCNRAVFQANQENLPI 442
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---K 570
+R +GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +P +
Sbjct: 443 LKRAVAGDASESALLKCIELCCGSVKEMRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPQ 502
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 503 HLLVMKGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLP 561
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 562 DEQFPEGFQFDTDDVNFPIDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 621
Query: 691 CTAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 622 ITAKAIAKGVGIISE 636
|
|
| UNIPROTKB|P05023 ATP1A1 "Sodium/potassium-transporting ATPase subunit alpha-1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1363 (484.9 bits), Expect = 4.6e-222, Sum P(2) = 4.6e-222
Identities = 279/615 (45%), Positives = 390/615 (63%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
K+++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 28 KDRDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTSARAAEILARDGPNALTP 82
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 83 PPTTPEWIKFCRQLFGGFSMLLWIGAILCFLAYSIQAATEEEPQNDNLYLGVVLSAVVII 142
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 143 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 202
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 203 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 262
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 263 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVI 322
Query: 395 YVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 323 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 382
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + +F+ T+ T+ L R A LC++A F+ NQ+N+P+
Sbjct: 383 QNRMTVAHMWFDNQIHEADTTENQSGVSFDKTSATWLALSRIAGLCNRAVFQANQENLPI 442
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---K 570
+R +GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +P +
Sbjct: 443 LKRAVAGDASESALLKCIELCCGSVKEMRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPQ 502
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 503 HLLVMKGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLP 561
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 562 DEQFPEGFQFDTDDVNFPIDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 621
Query: 691 CTAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 622 ITAKAIAKGVGIISE 636
|
|
| UNIPROTKB|Q5RDR3 ATP1A1 "Sodium/potassium-transporting ATPase subunit alpha-1" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 1363 (484.9 bits), Expect = 4.6e-222, Sum P(2) = 4.6e-222
Identities = 279/615 (45%), Positives = 390/615 (63%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
K+++MD +LK EV +D+H + L+EL+ T RGL+ L +DGPN+L
Sbjct: 28 KDRDMD-----ELKKEVSMDDHKLSLDELHRKYGTDLSRGLTSARAAEILARDGPNALTP 82
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 83 PPTTPEWIKFCRQLFGGFSMLLWIGAILCFLAYSIQAATEEEPQNDNLYLGVVLSAVVII 142
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIRNG I++ +V GD+V +K GD++PAD
Sbjct: 143 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKMSINAEEVVVGDLVEVKGGDRIPAD 202
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + TN +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 203 LRIISANGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTNCVEGTARGIVVYTG 262
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L + Y WL A +
Sbjct: 263 DRTVMGRIATLASGLEGGQTPIAAEIEHFIHIITGVAVFLGVSFFILSLILEYTWLEAVI 322
Query: 395 YVIGIIVANVPEGXXXXXXXXXXXXXKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEG KR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 323 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 382
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + +F+ T+ T+ L R A LC++A F+ NQ+N+P+
Sbjct: 383 QNRMTVAHMWFDNQIHEAGTTENQSGVSFDKTSATWLALSRIAGLCNRAVFQANQENLPI 442
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN---K 570
+R +GDA+E +L I+ S++++R + K+ E+PFNS NK+ L++H +P +
Sbjct: 443 LKRAVAGDASESALLKCIELCCGSVKEMRERYAKIVEIPFNSTNKYQLSIHKNPNTSEPR 502
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I++RC++++ KE L E K ++ GERVL F L L
Sbjct: 503 HLLVMKGAPERILDRCSSILLHG-KEQPLDEELKDAFQNAYLELGGLGERVLGFCHLFLP 561
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 562 DEQFPEGFQFDTDDVNFPIDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 621
Query: 691 CTAKAIAIKCHILSE 705
TAKAIA I+SE
Sbjct: 622 ITAKAIAKGVGIISE 636
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P28774 | AT1B_ARTSF | 3, ., 6, ., 3, ., 9 | 0.5050 | 0.8990 | 0.8605 | N/A | N/A |
| P05023 | AT1A1_HUMAN | 3, ., 6, ., 3, ., 9 | 0.5028 | 0.8834 | 0.8299 | yes | N/A |
| P18907 | AT1A1_HORSE | 3, ., 6, ., 3, ., 9 | 0.5033 | 0.8876 | 0.8354 | yes | N/A |
| P05024 | AT1A1_PIG | 3, ., 6, ., 3, ., 9 | 0.5 | 0.8876 | 0.8354 | yes | N/A |
| D2WKD8 | AT1A2_PIG | 3, ., 6, ., 3, ., 9 | 0.5056 | 0.8876 | 0.8362 | no | N/A |
| Q64541 | AT1A4_RAT | 3, ., 6, ., 3, ., 9 | 0.5034 | 0.8865 | 0.8287 | no | N/A |
| P50993 | AT1A2_HUMAN | 3, ., 6, ., 3, ., 9 | 0.5062 | 0.8865 | 0.8352 | no | N/A |
| P04074 | AT1A1_SHEEP | 3, ., 6, ., 3, ., 9 | 0.5044 | 0.8876 | 0.8354 | N/A | N/A |
| Q92123 | AT1A1_XENLA | 3, ., 6, ., 3, ., 9 | 0.5016 | 0.8907 | 0.8351 | N/A | N/A |
| Q5RDR3 | AT1A1_PONAB | 3, ., 6, ., 3, ., 9 | 0.5028 | 0.8834 | 0.8299 | yes | N/A |
| P13637 | AT1A3_HUMAN | 3, ., 6, ., 3, ., 9 | 0.5017 | 0.8876 | 0.8420 | no | N/A |
| Q8VDN2 | AT1A1_MOUSE | 3, ., 6, ., 3, ., 9 | 0.5050 | 0.8865 | 0.8328 | yes | N/A |
| Q08DA1 | AT1A1_BOVIN | 3, ., 6, ., 3, ., 9 | 0.5044 | 0.8876 | 0.8354 | yes | N/A |
| P24797 | AT1A2_CHICK | 3, ., 6, ., 3, ., 9 | 0.5106 | 0.8959 | 0.8466 | yes | N/A |
| P13607 | ATNA_DROME | 3, ., 6, ., 3, ., 9 | 0.5055 | 0.9021 | 0.8328 | yes | N/A |
| Q6PIC6 | AT1A3_MOUSE | 3, ., 6, ., 3, ., 9 | 0.5017 | 0.8876 | 0.8420 | no | N/A |
| Q9WV27 | AT1A4_MOUSE | 3, ., 6, ., 3, ., 9 | 0.5102 | 0.8865 | 0.8255 | no | N/A |
| Q6PIE5 | AT1A2_MOUSE | 3, ., 6, ., 3, ., 9 | 0.5085 | 0.8865 | 0.8352 | no | N/A |
| Q5RCD8 | AT1A2_PONAB | 3, ., 6, ., 3, ., 9 | 0.5039 | 0.8865 | 0.8352 | no | N/A |
| Q9YH26 | AT1A1_OREMO | 3, ., 6, ., 3, ., 9 | 0.5056 | 0.8844 | 0.8308 | N/A | N/A |
| Q6RWA9 | AT1A_TAESO | 3, ., 6, ., 3, ., 9 | 0.5005 | 0.8865 | 0.8402 | N/A | N/A |
| A2VDL6 | AT1A2_BOVIN | 3, ., 6, ., 3, ., 9 | 0.5051 | 0.8865 | 0.8352 | no | N/A |
| Q92030 | AT1A1_ANGAN | 3, ., 6, ., 3, ., 9 | 0.5017 | 0.8813 | 0.8287 | N/A | N/A |
| P06686 | AT1A2_RAT | 3, ., 6, ., 3, ., 9 | 0.5085 | 0.8865 | 0.8352 | no | N/A |
| P06687 | AT1A3_RAT | 3, ., 6, ., 3, ., 9 | 0.5017 | 0.8876 | 0.8420 | no | N/A |
| Q9N0Z6 | AT1A1_RABIT | 3, ., 6, ., 3, ., 9 | 0.5055 | 0.8855 | 0.8318 | yes | N/A |
| P06685 | AT1A1_RAT | 3, ., 6, ., 3, ., 9 | 0.5050 | 0.8865 | 0.8328 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 961 | |||
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-142 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-141 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-124 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-122 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-111 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-103 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-86 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-80 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 5e-73 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-56 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 9e-42 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-34 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 8e-29 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-28 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-27 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-26 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-23 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-23 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-22 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 3e-22 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-20 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 8e-20 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-19 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-18 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-18 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-17 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 6e-16 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-15 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 2e-14 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 4e-12 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 2e-07 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 3e-07 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 1e-06 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 8e-06 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 3e-05 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 2e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.001 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 0.002 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 0.002 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 1032 bits (2669), Expect = 0.0
Identities = 447/890 (50%), Positives = 600/890 (67%), Gaps = 33/890 (3%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
K++++D +LK EV++D+H + L+EL T +GLS L +DGPN+L
Sbjct: 2 KKRDLD-----ELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTP 56
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T EE DNL+LG++L+ I+
Sbjct: 57 PPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVII 116
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I ESF M+P +A VIR+G I++ +V GD+V +K GD++PAD
Sbjct: 117 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPAD 176
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I Q K +NSSLTGE EP T + T+ +E+RN+ FFSTN V G+ +G+V+ TG
Sbjct: 177 LRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTG 236
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L +GY WL A +
Sbjct: 237 DRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVI 296
Query: 395 YVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ D +F+ ++ T+ L R A LC++A F+ Q+N+P+
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHF---SPLNK 570
+R +GDA+E +L I+ + S+ ++R PKV E+PFNS NK+ L++H +
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
+ L+MKGAPE I+ERC++++ KE L E K ++ GERVL F L+L
Sbjct: 477 HLLVMKGAPERILERCSSILIHG-KEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLP 535
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
FP F+F TD +NFP+ +GLIS+ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 536 DEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 595
Query: 691 CTAKAIAIKCHILSETS--------------SDDN-------VFTGTDLRKITDEELKDI 729
TAKAIA I+SE + S N V G+DL+ +T E+L +I
Sbjct: 596 ITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEI 655
Query: 730 LETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEV 789
L+ + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI GS+V
Sbjct: 656 LKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 715
Query: 790 SKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLP 849
SKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I IPLP
Sbjct: 716 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLP 775
Query: 850 VSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILE 909
+ T+T+LCIDLGTDM PA+SLAYEK ES+IM R+PRNP+TD LV +L++ AY +G+++
Sbjct: 776 LGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQ 835
Query: 910 TLAGFLTYFHVMYDAGWDPMDLLNIRKSWE--SNNNLEDSYHKMWTRTER 957
L GF TYF ++ + G+ P+ L+ +R W+ N+LEDSY + WT +R
Sbjct: 836 ALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQR 885
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 663 bits (1713), Expect = 0.0
Identities = 309/832 (37%), Positives = 456/832 (54%), Gaps = 45/832 (5%)
Query: 118 IPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLW 177
+ EL L T P GLSE EVKRRL+K GPN LP++ + + + + F LL
Sbjct: 28 VERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLL 87
Query: 178 FGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMI 237
ALLS + I+L + ++ + F QE ++ E+ KM
Sbjct: 88 VAALLSAFVGDWV-------DAGVDAIVILLVV--VINALLGFVQEYRAEKALEALKKMS 138
Query: 238 PTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPV 297
+A V+R+G EI ++ LV GDIVLL+ GD VPAD+RL+E DL+ + S+LTGE PV
Sbjct: 139 SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPV 198
Query: 298 T----CTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKT 353
+ ++ N++F T +VSG KG+V+ TG T GKIA L ++
Sbjct: 199 EKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVK 258
Query: 354 TPIEQEVQHFMRLISMWALTLGAICFLLALYIGYN-WLNACVYVIGIIVANVPEGLLATL 412
TP+++++ + + + AL LGA+ F++ L+ G N L + + + + VA VPEGL A +
Sbjct: 259 TPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVV 318
Query: 413 TVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHV 472
T++L L A+R+A N IVR L +ETLGS+ IC+DKTGTLTQNKMTV ++IY
Sbjct: 319 TIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTV------KKIYIN 372
Query: 473 KNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQ 532
G D+D ++ + + + AA LC+ P ++ +GD TE ++ F +
Sbjct: 373 GGGKDIDDKDLKDSPALLRFLLAAALCN--SVTPEKNGW-----YQAGDPTEGALVEFAE 425
Query: 533 --PRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMM 590
+ + +P + E+PF+S K + + KY L +KGAPEVI+ERC ++
Sbjct: 426 KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIG 485
Query: 591 AESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSS 650
LT E LE+ +K AS+G RVLA A K S
Sbjct: 486 ELEP----LTEEGLRTLEEAVKELASEGLRVLAVA-----YKKLDRAEKDDEVDE--IES 534
Query: 651 GFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDD 710
+GL + DPPR V +AI+ +AGI+V M+TGDH TA AIA +C I +E S
Sbjct: 535 DLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESA- 593
Query: 711 NVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDA 770
V G +L ++DEEL +++E VFAR SP QK RIVE Q +VA+TGDGVNDA
Sbjct: 594 LVIDGAELDALSDEELAELVEELS--VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651
Query: 771 PALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILAS 830
PALK AD+GIAMG G++ +K+ AD++L+DDNFA+IVL + EGR ++ N+KK I Y+L+
Sbjct: 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSK 711
Query: 831 NIPEILPFLFYIFLGIP-LPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRT 889
N+ E+L L Y + LP++ + +L I+L TD PA++L E PES++M R PR P
Sbjct: 712 NVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEE 771
Query: 890 DHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN 941
L RK+ +G+L + LT+ + + + L + ++
Sbjct: 772 -GLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTT 822
|
Length = 917 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 446 bits (1150), Expect = e-142
Identities = 270/813 (33%), Positives = 407/813 (50%), Gaps = 83/813 (10%)
Query: 175 LLWFGALLSF-LAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESF 233
+L A +SF LA+ E E + + +IL IV +QER + E+
Sbjct: 12 ILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIV----GVWQERNAEKAIEAL 67
Query: 234 AKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGE 293
+ A V+R+G I + LV GDIV L +GDKVPADIR++ ++ L+ + S LTGE
Sbjct: 68 KEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGE 127
Query: 294 VEPVTCTLGATNSFAVE------SRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347
V T S E +N++F T +V+G +GVV+ TG +T +GKI
Sbjct: 128 SVSVNKH---TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMR 184
Query: 348 RLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLAL------YIGYNWLNACVY----VI 397
E++ TP+++++ F L+S + + +++ + +G W+ +Y +
Sbjct: 185 AAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAV 244
Query: 398 GIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNK 457
+ VA +PEGL A +T L L +++A KN IVR+L +VETLG IC+DKTGTLT N+
Sbjct: 245 ALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 304
Query: 458 MTVLHL-----------SFNRE--IYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEF 504
M+V + F Y + GV + L A + +
Sbjct: 305 MSVCKVVALDPSSSSLNEFCVTGTTYAPEGGV-IKDDGPVAGGQDAGLEELATIAALC-- 361
Query: 505 EPNQDNIPMRERKA----SGDATEVGILHFIQ------------PRIKSIQD----VRNT 544
N ++ ERK G+ATE + ++ + + +
Sbjct: 362 --NDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDK 419
Query: 545 FPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKK 604
F K+ + F+ K ++V P L +KGAPE ++ERCT ++ + LT + K
Sbjct: 420 FKKLATLEFSRDRK-SMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMK 478
Query: 605 YELEDKIKLFAS-KGERVLAFADLHLGQNNFPVNFKFSTDPMNFPS--SGFRLIGLISLY 661
+ IK + K R LA A + P +DP NF + S IG++ +
Sbjct: 479 NTILSVIKEMGTTKALRCLALAFKDIPD---PREEDLLSDPANFEAIESDLTFIGVVGML 535
Query: 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSE-TSSDDNVFTGTDLRK 720
DPPRP V DAI+ C AGIRVIM+TGD+ TA+AI + I S FTG + +
Sbjct: 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE 595
Query: 721 ITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780
+ + + ++F+R P K +VEL Q EIVA+TGDGVNDAPALKKADIGI
Sbjct: 596 MGPAKQRAA--CRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGI 653
Query: 781 AMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLF 840
AMG +G+EV+K+ +DM+L DDNFA+IV +EEGR I++N+K+ I Y+++SNI E++
Sbjct: 654 AMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFL 712
Query: 841 YIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPR----TDHLVGRK 896
LGIP + V +L ++L TD PA +L + P+ +IM + PR P T L R
Sbjct: 713 TAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRY 772
Query: 897 LVTYAYFHLGILETLAGFLTYF---HVMYDAGW 926
LV Y L T+ GF+ ++ H
Sbjct: 773 LVVGVYV---GLATVGGFVWWYLLTHFTGCDED 802
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 443 bits (1141), Expect = e-141
Identities = 266/805 (33%), Positives = 415/805 (51%), Gaps = 78/805 (9%)
Query: 118 IPLEELYSILDTHPDRGLSEL-EVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSA-- 174
+ +EE S L T GL+ E R G N + + L F
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDES----LWKKFLSQFVKNP 62
Query: 175 --LLWFG-ALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITE 231
LL A++S ++ + I LA+ +VT F QE +S E
Sbjct: 63 LILLLIASAVISVFMGNIDDA-----------VSITLAILIVVT--VGFVQEYRSEKSLE 109
Query: 232 SFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLT 291
+ K++P +IR G ++ + ++ LV GD+V L +GD+VPAD+R++E DL + S+LT
Sbjct: 110 ALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLT 169
Query: 292 GEVEPVTCTL----GATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347
GE PV+ ATN E N+ F T + G GKG+V+ TGSNT G + +
Sbjct: 170 GETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQ 229
Query: 348 RLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEG 407
+EK TP+++ + + +S+ + + + L+ + G +WL + + VA +PEG
Sbjct: 230 AIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEG 289
Query: 408 LLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHL---- 463
L +TV+L L R++ K IVR+L +VETLGS+ IC+DKTGTLT+N MTV +
Sbjct: 290 LPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSD 349
Query: 464 ---------SFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMR 514
S N + V DV + F T + L A LC+ A+F D +
Sbjct: 350 GLHTMLNAVSLN-QFGEVIVDGDV-LHGFYTVAVSRIL-EAGNLCNNAKFRNEADTL--- 403
Query: 515 ERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN-KYFL 573
G+ T+V ++ + D+R T+ +V EVPF+S K+ +
Sbjct: 404 ----LGNPTDVALIE--LLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMC 457
Query: 574 LMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNN 633
MKGA E +++ CT + K LT +++ ++++ AS G RV+AFA G
Sbjct: 458 FMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFAS---GPEK 514
Query: 634 FPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTA 693
+ F +GL+ + DPPRP V +A+ G+R+IM+TGD TA
Sbjct: 515 GQLTF----------------LGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETA 558
Query: 694 KAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELY 753
+IA + + S+TS +G L + D++L I+ K VFAR SP K++IV+
Sbjct: 559 VSIARRLGMPSKTSQSV---SGEKLDAMDDQQLSQIVP--KVAVFARASPEHKMKIVKAL 613
Query: 754 QSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813
Q ++VA+TGDGVNDAPALK ADIG+AMG TG++V+K+ ADMIL DD+FA+I+ IEEG
Sbjct: 614 QKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEG 673
Query: 814 RLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYE 873
+ IF+N+K I + L++++ + +G P P++ + +L I++ D PA SL E
Sbjct: 674 KGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVE 733
Query: 874 KPESNIMSREPRNPRTDHLVGRKLV 898
+ ++M + PR PR D ++ + L+
Sbjct: 734 PVDKDVMRKPPR-PRNDKILTKDLI 757
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 401 bits (1032), Expect = e-124
Identities = 247/850 (29%), Positives = 398/850 (46%), Gaps = 88/850 (10%)
Query: 88 SILRFIHKEKEMDVAQLRDLKNEV----DIDEHLIPLEELYSILDTHPDRGLSEL--EVK 141
SI ++ V+ L DL + + E L E + + L T + G+ ++
Sbjct: 9 SIRDNFTDGFDVGVSILTDLTDIFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLE 68
Query: 142 RRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLW------------FGALLSFLAYLL 189
RR + G N LP+K + F ++W A++S + L
Sbjct: 69 RREKVYGKNELPEK------------PPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLP 116
Query: 190 E-AETNEEKPQDNLWL---GIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIR 245
E E + W+ I++++ V + + +K + + + VIR
Sbjct: 117 EPGEGKADTETG--WIEGVAILVSVIL-VVLVTAVNDYKKELQFRQLNREKSAQKIAVIR 173
Query: 246 NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN 305
G ++I +V GDIV L GD VPAD I L+ + SS+TGE +P+
Sbjct: 174 GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGP---- 229
Query: 306 SFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMR 365
+ T + GSG+ +V G N+ GK+ + + +TP+++++
Sbjct: 230 ----VQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAG 285
Query: 366 LISMWALTLGAICFLLA--LYI--------------GYNWLNACVYVIGIIVANVPEGLL 409
LI + + + FL+ Y+ +L+ + + I+V VPEGL
Sbjct: 286 LIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLP 345
Query: 410 ATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREI 469
+T++L + K++ N +VR L ET+GS IC+DKTGTLTQN M+V+ +
Sbjct: 346 LAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQR 405
Query: 470 YHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILH 529
++V+ D+ LV L S +E D +R G TE +L
Sbjct: 406 FNVR-----DVLRNVPKHVRNILVEGISLNSSSE--EVVDR--GGKRAFIGSKTECALLD 456
Query: 530 FIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTM 589
F ++ Q+VR V PFNS KF V KY KGA E++++ C
Sbjct: 457 FGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKR 516
Query: 590 MAESDKEAFLTAEKKYELEDKIKLFASKGERV--LAFADLHLGQNNFPVNFKFSTDPMNF 647
+ + + ++ + K D I+ AS R LA+ D + ++
Sbjct: 517 LDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPR----------KDY 566
Query: 648 PSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS 707
P+ G LIG++ + DP RP V +A+ C +AGI V MVTGD+ TAKAIA C IL+
Sbjct: 567 PNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG 626
Query: 708 SDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGV 767
G + R + EE+ IL K V AR+SPL K +V + + + E+VAVTGDG
Sbjct: 627 L---AMEGKEFRSLVYEEMDPILP--KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT 681
Query: 768 NDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYI 827
NDAPALK AD+G +MGI+G+EV+K+ +D+IL+DDNFASIV ++ GR ++DN++K + +
Sbjct: 682 NDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQ 741
Query: 828 LASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNP 887
L N+ ++ + P++ V +L ++L D A++LA E P ++ R+P
Sbjct: 742 LTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKP-IG 800
Query: 888 RTDHLVGRKL 897
R L+ R +
Sbjct: 801 RNAPLISRSM 810
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 383 bits (986), Expect = e-122
Identities = 204/649 (31%), Positives = 292/649 (44%), Gaps = 119/649 (18%)
Query: 207 ILALTCIVTGMFSFYQERKSSHITESFAKMI--PTRATVIRNGSVKEIDSAGLVRGDIVL 264
+ +V + Q+ K+ I S + + ATV+RNG KEI + LV GD+VL
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVL 59
Query: 265 LKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSG 324
+K G+ VPAD L+ + S+LTGE PV T + +LVF T + G
Sbjct: 60 VKSGETVPADGVLLS-GSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGG 118
Query: 325 SGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALY 384
+ VV TG T +G+IA + + TP++ + I + L L A+ L L+
Sbjct: 119 TLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLF 178
Query: 385 IGYNWLNACVYVI----GIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLG 440
I N+ + ++V VP L A +TV+L + RLA K +VR L +E LG
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 441 SIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCS 500
+ +C+DKTGTLT+NKMT+ + + + V N
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYIDG-GKEDNSSSLVACDN------------------ 279
Query: 501 KAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFH 560
SGD E +L + K+ + + PF+S+ K
Sbjct: 280 ---------------NYLSGDPMEKALLKSAELVGKA-DKGNKEYKILDVFPFSSVLKRM 323
Query: 561 LTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGER 620
+ +P L +KGAPE I+ERC E+K A +G R
Sbjct: 324 SVIVETPDGSDLLFVKGAPEFILERCN------------------NYEEKYLELARQGLR 365
Query: 621 VLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGI 680
VLAFA L + +GLI+ DP RP + I+ AGI
Sbjct: 366 VLAFASKELEDD-------------------LEFLGLITFEDPLRPDAKETIEELKAAGI 406
Query: 681 RVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740
+V+M+TGD+ TAKAIA + I VFAR
Sbjct: 407 KVVMITGDNVLTAKAIAKELGI---------------------------------DVFAR 433
Query: 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMD 800
SP QKL+IVE Q IVA+TGDGVNDAPALKKAD+GIAMG +K AD++L+D
Sbjct: 434 VSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLD 487
Query: 801 DNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLP 849
D+ ++IV ++EGR IF N+K +I + +A N+ I L I + + LP
Sbjct: 488 DDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLLP 536
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 367 bits (944), Expect = e-111
Identities = 265/931 (28%), Positives = 417/931 (44%), Gaps = 153/931 (16%)
Query: 121 EELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGA 180
+E + T GL+ E + RL++ G N L I+ +L+ + +L A
Sbjct: 13 DEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAA 72
Query: 181 LLSFLAYLLEAETNEEKPQDNLWL-GIILALTCIVTGMFSFYQERKSSHITESFAKMIPT 239
+SF A + W+ G +++ + + F QE K+ +S +
Sbjct: 73 AISF------AMHD--------WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASP 118
Query: 240 RATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVT- 298
A VIRNG IDS LV GDI LLK GD +PAD+RLIE ++ + + LTGE PV
Sbjct: 119 MAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIK 178
Query: 299 ---CTLGATNSFAVESR-NLVFFSTNLVSGSGKGVVILTGSNTVMGKIA-------GLTN 347
T G + R NL F S+ + G KG+ I T N+ +G IA GL
Sbjct: 179 DAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238
Query: 348 RLEKK------------TTPIEQEVQHFM---------RLISMWALTLGAICFLLALYI- 385
R EK ++ F+ R +S A+ L I + A+ +
Sbjct: 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVM 298
Query: 386 ---GYNWLN-ACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGS 441
++ +Y I + ++ +PE L+A L++++ + A ++ +N IVR+L +E LG+
Sbjct: 299 AAHKFDVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGA 358
Query: 442 IRTICTDKTGTLTQNKMTVLHL----------------------------SFNREIYHVK 473
+ IC+DKTGT+TQ KM + F+ Y
Sbjct: 359 VNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHN 418
Query: 474 NGVDVDI-QNFETNT------------TYKTLVRAACLCSKAEFEPNQDNIPMRERKASG 520
D DI + F+ + L+ A L + A + KA G
Sbjct: 419 EAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT---DCWKAHG 475
Query: 521 DATEVGI------LHFIQPRIKSIQDVRNT-------------------FPKVTEVPFNS 555
D TE+ I + +D+ + F + E PF+S
Sbjct: 476 DPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535
Query: 556 LNKFHLTVHFSPLNK-YFLLMKGAPEVIMERCTTMMAESD-KEAFLTAEKKYELEDKIKL 613
K +++ + Y + KGA E I+E C++ + K + L + + ++
Sbjct: 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMES 595
Query: 614 FASKGERVLAFADLHLGQ-NNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAI 672
A++G RVLAFA + +N K T S +GLI +YDPPR A+
Sbjct: 596 LAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAV 655
Query: 673 DACHKAGIRVIMVTGDHPCTAKAIAIKCHIL-------SETSSDDNVFTGTDLRKITDEE 725
+ CH+AGI V M+TGD P TAKAIA + I+ + D V TG+ ++DEE
Sbjct: 656 EKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE 715
Query: 726 LKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGIT 785
+ D+ LV AR +P K++++E A+TGDGVND+P+LK A++GIAMGI
Sbjct: 716 VDDLKAL--CLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGIN 773
Query: 786 GSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLG 845
GS+V+K +D++L DDNFASI+ IEEGR +FDN+ K + ++LA N+ E + + +G
Sbjct: 774 GSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI----LLIIG 829
Query: 846 IP---------LPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVG-- 894
+ P+S V +L + T +PA+ L EK ++M R P D+ VG
Sbjct: 830 LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPH----DNEVGIF 885
Query: 895 RKLVTYAYFHLGILETLAGFLTYFHVMYDAG 925
+K + F G + ++ ++Y G
Sbjct: 886 QKELIIDMFAYGFFLGGSCLASFTGILYGFG 916
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 340 bits (873), Expect = e-103
Identities = 227/803 (28%), Positives = 366/803 (45%), Gaps = 124/803 (15%)
Query: 134 GLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAET 193
GL+ E K+RL K GPN LP+K + + +G+ + S ++ A+++ L
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKV-SPLLKFLGFFWNPLSWVMEAAAIIA--IALEN--- 54
Query: 194 NEEKPQDNLW--LGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKE 251
W IIL L + F +E K+ + E+ + + +A V+R+G +E
Sbjct: 55 ---------WVDFVIILGLLLL-NATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQE 104
Query: 252 IDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVES 311
I ++ LV GD+V LKIGD VPAD RL E ++ + ++LTGE PVT G
Sbjct: 105 IPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTG--------- 155
Query: 312 RNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWA 371
++ + + + G + VV TG NT GK A L E + +++ + + +
Sbjct: 156 -DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLI 214
Query: 372 LTLGAICFLLALYI-GYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIV 430
L I ++ + G ++ + + ++V +P + A L+V++ + A LA K IV
Sbjct: 215 GVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIV 274
Query: 431 RRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYK 490
RL +E L + +C+DKTGTLT NK+++ EI NG D D
Sbjct: 275 TRLTAIEELAGMDILCSDKTGTLTLNKLSI------DEILPFFNGFDKD----------- 317
Query: 491 TLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTE 550
++ A L S+ E +QD I D +G K +++ R+ + +
Sbjct: 318 DVLLYAALASR---EEDQDAI---------DTAVLG-------SAKDLKEARDGYKVLEF 358
Query: 551 VPFNSLNKF-HLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELED 609
VPF+ ++K TV K F + KGAP+VI++ + ++ KE E+K E +
Sbjct: 359 VPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILD-----LCDNKKEI----EEKVE--E 407
Query: 610 KIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVP 669
K+ AS+G R L A + +GL+ L+DPPR
Sbjct: 408 KVDELASRGYRALGVA-------------------RTDEEGRWHFLGLLPLFDPPRHDTK 448
Query: 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDI 729
+ I+ G+ V MVTGDH AK A N++T L K + + D+
Sbjct: 449 ETIERARHLGVEVKMVTGDHLAIAKETA------RRLGLGTNIYTADVLLKGDNRD--DL 500
Query: 730 LETNKELV-----FARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM-G 783
E+V FA P K IVE+ Q +V +TGDGVNDAPALKKAD+GIA+ G
Sbjct: 501 PSGLGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG 560
Query: 784 ITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIF 843
T + ++ AD++L + + IV I E R IF +K + Y +A I I+ F +
Sbjct: 561 AT--DAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETI-RIVFFFGLLI 617
Query: 844 LGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYF 903
L + + V+ I + D +++AY+ + S+ P R++ T +
Sbjct: 618 LILNFYFPPIMVVIIAILNDG-TIMTIAYDNVKP---SKLP-----QRWNLREVFTMSTV 668
Query: 904 HLGILETLAGFLTYFHVMYDAGW 926
LGI ++ FL + D +
Sbjct: 669 -LGIYLVISTFLLL-AIALDTTF 689
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 296 bits (758), Expect = 2e-86
Identities = 211/751 (28%), Positives = 349/751 (46%), Gaps = 89/751 (11%)
Query: 110 EVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIF 169
+ E + E L L H GL+ +EV RL + GPN ++ ++ N+ +L+
Sbjct: 10 NNLLKESQMGKETLLRKLGVHET-GLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFN 68
Query: 170 RGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHI 229
F +L +S+L D+L +I+AL + +G+ F QE ++
Sbjct: 69 NPFIYILAMLMGVSYLT-------------DDLEATVIIALMVLASGLLGFIQESRAERA 115
Query: 230 TESFAKMIPTRATVIR------NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283
+ M+ ATV+R NGS+ E+ LV GD++ L GD +PAD R+I +DL
Sbjct: 116 AYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDL 175
Query: 284 KAENSSLTGE---VEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMG 340
S+LTGE VE A + +E NL F TN++SG + VV+ TGS+T G
Sbjct: 176 FINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFG 235
Query: 341 KIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGII 400
+A + T ++ V+ +L+ + L + + ++ + +WL A ++ + +
Sbjct: 236 SLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVA 294
Query: 401 VANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTV 460
V PE L ++ +L A ++ K IV+ L ++ G++ +CTDKTGTLTQ+K+ +
Sbjct: 295 VGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIEL 354
Query: 461 LHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASG 520
+D + T + +++ A L S F+ N+ A
Sbjct: 355 EK--------------HIDS----SGETSERVLKMAWLNS--YFQTGWKNVLDHAVLAKL 394
Query: 521 DATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPE 580
D + + S + KV E+PF+ + V + L+ KGA E
Sbjct: 395 DES-------AARQTAS------RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVE 441
Query: 581 VIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFA--DLHLGQNNFPVNF 638
++ C T L+ +K EL+D +G RV+A A L +G+ +F
Sbjct: 442 EMLTVC-THKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTK-- 498
Query: 639 KFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAI 698
TD + G + DPP+ + +AI A K GI V ++TGD+ I
Sbjct: 499 ---TD-----EEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI-- 548
Query: 699 KCHILSETSSDDN-VFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLD 757
C E D N G D+ +++DEEL L K +FAR +P+QK RI+ L +
Sbjct: 549 -CQ---EVGIDANDFLLGADIEELSDEELARELR--KYHIFARLTPMQKSRIIGLLKKAG 602
Query: 758 EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIF 817
V GDG+NDAPAL+KAD+GI++ T ++++K+ +D+IL++ + + G+ EGR F
Sbjct: 603 HTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTF 661
Query: 818 DNLKKSIAYILASNIPEI---------LPFL 839
N+ K + +SN + +PFL
Sbjct: 662 GNILKYLKMTASSNFGNVFSVLVASAFIPFL 692
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 2e-80
Identities = 209/756 (27%), Positives = 347/756 (45%), Gaps = 120/756 (15%)
Query: 121 EELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRG-FSALLWFG 179
EEL+ DTHP+ GL+E EV+ E+ G N LP + + +V + +R F+ LL
Sbjct: 55 EELWKTFDTHPE-GLNEAEVESAREQHGENELPAQKPLP-WWVHLWVCYRNPFNILLTIL 112
Query: 180 ALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPT 239
+S+ ++L+ ++AL ++ + +F QE +S+ ++ M+
Sbjct: 113 GAISYAT-------------EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSN 159
Query: 240 RATVIRNGSVK------EIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGE 293
ATV+R + K EI LV GDI+ L GD +PAD+R+++ +DL +SLTGE
Sbjct: 160 TATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGE 219
Query: 294 ---VEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLE 350
VE T +S +E L F TN+VSG+ + VVI TG+NT G++AG + +
Sbjct: 220 SLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279
Query: 351 KKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLA 410
+ +Q + L+ + L + + L+ Y +W A ++ + + V PE L
Sbjct: 280 SEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPM 339
Query: 411 TLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMT----------- 459
+T +L A +L+ + IV+RL ++ G++ +CTDKTGTLTQ+K+
Sbjct: 340 IVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKT 399
Query: 460 ---VLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRER 516
VLH ++ Y T K L+ A L + E R
Sbjct: 400 SERVLHSAWLNSHYQ---------------TGLKNLLDTAVL-EGVDEE--------SAR 435
Query: 517 KASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLM- 575
+ + K+ E+PF+ + ++V + ++ L+
Sbjct: 436 SLASR-----------------------WQKIDEIPFD-FERRRMSVVVAENTEHHQLIC 471
Query: 576 KGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFA--DLHLGQNN 633
KGA E I+ C+ + + L ++ +G RV+A A L + +
Sbjct: 472 KGALEEILNVCSQVRHNGEIVP-LDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD 530
Query: 634 FPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTA 693
+ D S L G I+ DPP+ A+ A +G+ V ++TGD A
Sbjct: 531 YQR-----AD-----ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVA 580
Query: 694 KAIAIKCHILSETSSD-DNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVEL 752
+ CH E D V G+D+ ++D+EL ++ E +FAR +P+ K RIV L
Sbjct: 581 AKV---CH---EVGLDAGEVLIGSDIETLSDDELANLAERTT--LFARLTPMHKERIVTL 632
Query: 753 YQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812
+ +V GDG+NDAPAL+ ADIGI++ +++++ AD+IL++ + + G+ E
Sbjct: 633 LKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIE 691
Query: 813 GRLIFDNLKKSIAYILASNIPEI---------LPFL 839
GR F N+ K I +SN + LPFL
Sbjct: 692 GRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFL 727
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 259 bits (663), Expect = 5e-73
Identities = 209/748 (27%), Positives = 354/748 (47%), Gaps = 103/748 (13%)
Query: 119 PLEELYSILDTHPDRGLSELEVKRRLEKDGPN---------SLPQKYR-INNVYVLVGYI 168
LEE + L+TH GL+E + RL++ GPN +L Q + NN ++ V
Sbjct: 31 SLEETLANLNTHRQ-GLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYV--- 86
Query: 169 FRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCI-VTGMFSFYQERKSS 227
L+ A+ F Y L EE D G+I+ LT + ++G+ F+QE +S+
Sbjct: 87 ------LMVLAAISFFTDYWLPLRRGEE--TD--LTGVIIILTMVLLSGLLRFWQEFRSN 136
Query: 228 HITESFAKMIPTRATVIRNGSV------KEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ 281
E+ M+ T ATV+R G +EI LV GDIV L GD +PAD+RLIE +
Sbjct: 137 KAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR 196
Query: 282 DLKAENSSLTGEVEPVTC--TLGA-----------TNSFAVESRNLVFFSTNLVSGSGKG 328
DL + LTGE PV TLGA ++ N+ F TN+VSG+
Sbjct: 197 DLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATA 256
Query: 329 VVILTGSNTVMGKIAG--LTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIG 386
VV+ TGS T G +A + R + T ++ V L+ + L + + L+ +
Sbjct: 257 VVVATGSRTYFGSLAKSIVGTRAQ---TAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK 313
Query: 387 YNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTIC 446
+WL A ++ + + V PE L ++ +L A +A + +V+RL ++ G++ +C
Sbjct: 314 GDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLC 373
Query: 447 TDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEP 506
TDKTGTLTQ+++ + H H +DV + E +++ A L S
Sbjct: 374 TDKTGTLTQDRIILEH--------H----LDVSGRKDE------RVLQLAWLNS------ 409
Query: 507 NQDNIPMRERKASG--DATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVH 564
SG + + ++ F + + ++ + KV E+PF+ + + V
Sbjct: 410 ---------FHQSGMKNLMDQAVVAFAEGNPEIVKPAG--YRKVDELPFDFVRRRLSVVV 458
Query: 565 FSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAF 624
++ L+ KGA E ++ T + + D L ++ L + + + G RVL
Sbjct: 459 EDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLV 517
Query: 625 ADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIM 684
A + ++ST + G ++ DPP+ + AI A + G+ V +
Sbjct: 518 ATREIPGGE--SRAQYSTADER----DLVIRGFLTFLDPPKESAAPAIAALRENGVAVKV 571
Query: 685 VTGDHPCTAKAIAIKCHILSETSSDDNV-FTGTDLRKITDEELKDILETNKELVFARTSP 743
+TGD+P + I E + GT++ + D L +E + VFA+ +P
Sbjct: 572 LTGDNP------IVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVE--ERTVFAKLTP 623
Query: 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNF 803
LQK R+++ Q+ V GDG+NDAPAL+ AD+GI++ +G++++K++AD+IL++ +
Sbjct: 624 LQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSL 682
Query: 804 ASIVLGIEEGRLIFDNLKKSIAYILASN 831
+ G+ +GR F N+ K + +SN
Sbjct: 683 MVLEEGVIKGRETFGNIIKYLNMTASSN 710
|
Length = 903 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 3e-56
Identities = 84/234 (35%), Positives = 130/234 (55%), Gaps = 13/234 (5%)
Query: 206 IILALTCIVTGMFSFYQERKSSHITESFAKMIPTRA-TVIRNGSVKEIDSAGLVRGDIVL 264
IIL L I + YQE ++ ++ K++P A TVIR+G +EI + LV GDIVL
Sbjct: 1 IILLLVLINA-LLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVL 59
Query: 265 LKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSG 324
LK GD+VPAD R+IE L+ + S+LTGE PV + G + VF T ++SG
Sbjct: 60 LKPGDRVPADGRIIE-GSLEVDESALTGESLPVEKSRG----------DTVFAGTVVLSG 108
Query: 325 SGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALY 384
K +V TG +T +GKIA L + TP+++ + +++ L L + FL+ +
Sbjct: 109 ELKVIVTATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFF 168
Query: 385 IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVET 438
G ++L A + + ++VA PE L + ++L + A RLA K +V+ L +ET
Sbjct: 169 RGGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 9e-42
Identities = 192/879 (21%), Positives = 303/879 (34%), Gaps = 195/879 (22%)
Query: 122 ELYSILDTHPDRGLSELEVKRRLEKDGPNSL--PQKYRINNVYVLVG------YIFRGFS 173
GL+ ++ +R K G N + P + + +L Y+F+ FS
Sbjct: 127 FGVYSTCAGHSNGLTTGDIAQRKAKYGKNEIEIPVP---SFLELLKEEVLHPFYVFQVFS 183
Query: 174 ALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESF 233
+LW L + Y L + ++ T I S YQ RK +
Sbjct: 184 VILWL--LDEYYYYSL--------------CIVFMSSTSISL---SVYQIRKQM---QRL 221
Query: 234 AKMI--PTRATVIRNGSVKEIDSAGLVRGDIVLLKI--GDKVPADIRLIEIQDLKAENSS 289
M+ P VIRNG I S LV GDIV + +P D L+ + E S
Sbjct: 222 RDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCIVNE-SM 280
Query: 290 LTGEVEPVT------CTLGATNSFAVE--SRNLVFFSTNLV-------SGSGKGVVILTG 334
LTGE PV + F E ++++F T ++ +V+ TG
Sbjct: 281 LTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTG 340
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
+T G++ + + L K + F ++ + L L + + I
Sbjct: 341 FSTSKGQL--VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDG-RPLGK 397
Query: 395 YVIG---IIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTG 451
++ II VP L A L++ + + RL K + G I C DKTG
Sbjct: 398 IILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTG 457
Query: 452 TLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVR-AACLCSKAEFEPNQDN 510
TLT++ + + R + + + T + L + +
Sbjct: 458 TLTEDGLDL------RGVQGLSGNQEFL--KIVTEDSSLKPSITHKALATCHSLTKLEGK 509
Query: 511 IPMRERKASGDATEVGILHFI-----------QPRIKSIQDVRNTFPKVTEV----PFNS 555
+ GD + + +P + P+ + F+S
Sbjct: 510 L-------VGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSS 562
Query: 556 -LNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLF 614
L + + V + +KGAPE I C+ SD + L + +
Sbjct: 563 ALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKS------------Y 610
Query: 615 ASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDA 674
+G RVLA A L + S D + S +G I +P +P + I
Sbjct: 611 TREGYRVLALAYKELPKLTLQKAQDLSRDAV---ESNLTFLGFIVFENPLKPDTKEVIKE 667
Query: 675 CHKAGIRVIMVTGDHPCTAKAIAIKCHIL----------------------------SET 706
+A IR +M+TGD+P TA +A +C I+ S
Sbjct: 668 LKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIP 727
Query: 707 SSDDNVFTGTDLRKITDEELKDILETNKEL--------------------------VFAR 740
+ V L + + E D+L + L VFAR
Sbjct: 728 FASTQVEIPYPLGQDSVE---DLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFAR 784
Query: 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM-----GITGSEVSKQTAD 795
+P QK +VEL Q LD V + GDG ND ALK+AD+GI++ + SK
Sbjct: 785 MAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAAPFTSKLA-- 842
Query: 796 MILMDDNFASIVLGIEEGRLIFDNLKKSIA----YILASNIPEI-LPFLFYI-------- 842
+ + + I EGR L S L S I + L+ I
Sbjct: 843 ------SISCVPNVIREGRC---ALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQ 893
Query: 843 FLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMS 881
FL I L + L + P L+ E+P SN+ S
Sbjct: 894 FLTIDLLLIFPVALLMSRNK---PLKKLSKERPPSNLFS 929
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 4e-34
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 44/196 (22%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
+L+G+I+L D RP +AI A GI+V+M+TGD+ TA+AIA + I
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI---------- 576
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
DE V A P K IV Q+ VA+ GDG+NDAPA
Sbjct: 577 ----------DE------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPA 614
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNI 832
L AD+GIAMG +G++V+ + AD++LM D+ +++ I+ R +K+++ A
Sbjct: 615 LAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLF--WA--- 668
Query: 833 PEILPFLFYIFLGIPL 848
Y + IPL
Sbjct: 669 ------FGYNAIAIPL 678
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 8e-29
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 39/211 (18%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAG-IRVIMVTGDHPCTAKAIAIKCHILSETSSDDN 711
L+G+I+L D RP +AI A +AG I+++M+TGD+ A+A+A + I
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI--------- 424
Query: 712 VFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAP 771
DE V A P KL IV+ Q +VA+ GDG+NDAP
Sbjct: 425 -----------DE------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAP 461
Query: 772 ALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASN 831
AL AD+GIAMG GS+V+ + AD++L++D+ +S+ I+ R +K+++A+ L N
Sbjct: 462 ALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYN 520
Query: 832 IPEILPFLFYIFLGIPLPVSTVTVLCIDLGT 862
+ I L + L + VL + T
Sbjct: 521 LVAIPLAAG-GLLPLWL----LAVLLHEGST 546
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-28
Identities = 148/638 (23%), Positives = 249/638 (39%), Gaps = 131/638 (20%)
Query: 175 LLWFGALLSFLAYLLEA--ETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITES 232
++ G++L+ + NL + IIL T + E + +S
Sbjct: 37 VVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADS 96
Query: 233 FAKM-IPTRATVIRN-GSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSL 290
K T A ++R GS++ + + L +GDIVL++ G+ +P+D +IE E S++
Sbjct: 97 LRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDE-SAI 155
Query: 291 TGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLE 350
TGE PV G + V T ++S K + T + ++ L E
Sbjct: 156 TGESAPVIRESGG-------DFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAE 208
Query: 351 KKTTPIEQEVQHFMRLISMWALTLGAICFL--LALYIGYNWLNACVYVIGIIVANVPE-- 406
++ TP E+ + L + + L A+ L A+Y G + V ++ ++V +P
Sbjct: 209 RQKTP--NEIALTILLSGLTLIFLLAVATLYPFAIYSGGGAASVTV-LVALLVCLIPTTI 265
Query: 407 -GLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT-QNKMTVLHLS 464
GLL+ + ++ R+ N I + VE G + T+ DKTGT+T N+
Sbjct: 266 GGLLSAIGIA---GMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQAS---- 318
Query: 465 FNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATE 524
E V GV + L AA L S A+ P +I +K + E
Sbjct: 319 ---EFIPV-PGVSE-----------EELADAAQLASLADETPEGRSIVELAKKLGIELRE 363
Query: 525 VGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIME 584
+ + VPF + + V + KGA + I
Sbjct: 364 DDLQSHAEF-----------------VPFTAQTRMS-GVDLPGGREIR---KGAVDAIRR 402
Query: 585 RCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDP 644
++ L+ + + G L + N
Sbjct: 403 YVRERGGHIPED----------LDAAVDEVSRLGGTPLVVVE-----NG----------- 436
Query: 645 MNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704
R++G+I L D +P + + K GI+ +M+TGD+P TA AIA +
Sbjct: 437 --------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA------A 482
Query: 705 ETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTG 764
E DD A +P KL ++ Q+ +VA+TG
Sbjct: 483 EAGVDD--------------------------FIAEATPEDKLALIRQEQAEGRLVAMTG 516
Query: 765 DGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDN 802
DG NDAPAL +AD+G+AM +G++ +K+ A+M+ +D N
Sbjct: 517 DGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSN 553
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 3e-27
Identities = 145/623 (23%), Positives = 252/623 (40%), Gaps = 142/623 (22%)
Query: 231 ESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSL 290
+FAK++ +G++ ++ + L +GDIVL++ GD +P D +IE + S++
Sbjct: 104 TTFAKLLR------DDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-GVASVDESAI 156
Query: 291 TGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLE 350
TGE PV G FA V T ++S T + ++ L +
Sbjct: 157 TGESAPVIKESGG--DFAS-----VTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQ 209
Query: 351 KKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYV---IGIIVANVPE- 406
++ TP E + I + ALTL + L+ + + V + ++V +P
Sbjct: 210 RRKTPNEIALT-----ILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTT 264
Query: 407 --GLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLS 464
GLL+ + ++ R+ N I + VE G + T+ DKTGT+T
Sbjct: 265 IGGLLSAIGIA---GMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLG-------- 313
Query: 465 FNR--EIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522
NR + GVD KTL AA L S A+ P +I + A
Sbjct: 314 -NRLASEFIPAQGVDE-----------KTLADAAQLASLADDTPEGKSIVIL-------A 354
Query: 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVI 582
++GI R +Q + TF V F + + L+ ++ KGA + I
Sbjct: 355 KQLGI------REDDVQSLHATF-----VEFTAQTRMSGI----NLDNGRMIRKGAVDAI 399
Query: 583 MERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFST 642
E++ T +L+ + A +G L +
Sbjct: 400 KRH-----VEANGGHIPT-----DLDQAVDQVARQGGTPLVVCE---------------- 433
Query: 643 DPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHI 702
R+ G+I L D + + + K GI+ IM+TGD+ TA AIA
Sbjct: 434 --------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA----- 480
Query: 703 LSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAV 762
+E DD A +P K+ ++ Q+ ++VA+
Sbjct: 481 -AEAGVDD--------------------------FIAEATPEDKIALIRQEQAEGKLVAM 513
Query: 763 TGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKK 822
TGDG NDAPAL +AD+G+AM +G++ +K+ A+M+ +D + ++ + G+ +
Sbjct: 514 TGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGA 572
Query: 823 SIAYILASNIPE---ILPFLFYI 842
+ +A+++ + I+P +F
Sbjct: 573 LTTFSIANDVAKYFAIIPAIFAA 595
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 5e-26
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 39/210 (18%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGI-RVIMVTGDHPCTAKAIAIKCHILSETSSDDN 711
+G I L D PRP +AI GI +V+M+TGD A+ +A + I
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI--------- 402
Query: 712 VFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAP 771
DE V A P KL IV+ + VA+ GDG+NDAP
Sbjct: 403 -----------DE------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAP 439
Query: 772 ALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASN 831
AL AD+GIAMG +GS+V+ +TAD++L++D+ + + I R +K+++ L
Sbjct: 440 ALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGII 499
Query: 832 IPEILPFLFYIFLGIPLPV-----STVTVL 856
+ IL LF L + L V STV V+
Sbjct: 500 LLLILLALFG-VLPLWLAVLGHEGSTVLVI 528
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 6e-26
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 44/200 (22%)
Query: 649 SSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS 708
+ L G+++L D +P + I A + GI +M+TGD+ TAKA+A L
Sbjct: 400 AVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA---KELG---- 452
Query: 709 DDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVN 768
I + V A P K +++ Q ++VA+ GDG+N
Sbjct: 453 ------------IEN-------------VRAEVLPDDKAALIKKLQEKGKVVAMVGDGIN 487
Query: 769 DAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYIL 828
DAPAL +AD+GIA+G G++V+ + AD++L+ ++ + I+ R +K+++ +
Sbjct: 488 DAPALAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAF 546
Query: 829 ASNIPEILPFLFYIFLGIPL 848
N+ + IP+
Sbjct: 547 GYNV-----------IAIPI 555
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 1e-23
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 25/282 (8%)
Query: 204 LGIILALTCIVTGMFSF------YQERKSSHITESFAKMIPTRATVIR-NGSVKEIDSAG 256
+G++L ++ +F + ++S + + P+ A V++ +GS +E+
Sbjct: 15 MGLVLEGALLLF-LFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEE 73
Query: 257 LVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVF 316
L GDIV+++ G+++P D +I + E S+LTGE PV G VF
Sbjct: 74 LQVGDIVIVRPGERIPVDGVVISGESEVDE-SALTGESMPVEKKEGDE----------VF 122
Query: 317 FSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGA 376
T GS V G ++ + +I L + PI++ L +
Sbjct: 123 AGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIAL 182
Query: 377 ICFLLALYIGYNWLNACVYVIGIIVANVPEGL-LATLTVSLTLTAKRLASKNCI-VRRLQ 434
+ F++ L +G A + ++V P L LAT L A++ I ++
Sbjct: 183 LTFVVWLALGALG--ALYRALAVLVVACPCALGLATPVAILVAIGV--AARRGILIKGGD 238
Query: 435 TVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGV 476
+E L ++T+ DKTGTLT K TV+ + + + +
Sbjct: 239 ALEKLAKVKTVVFDKTGTLTTGKPTVVDIEPLDDASISEEEL 280
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 1e-23
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 24/267 (8%)
Query: 200 DNLWLGIILALTCIVTGMFSF------YQERKSSHITESFAKMIPTRATVIRNGSVKEID 253
G +L L +FS Y ++ ++ ++ P A V+R GS++E+
Sbjct: 16 GEYLEGALLLL------LFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVA 69
Query: 254 SAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRN 313
L GD+V++K G++VP D ++ E S+LTGE PV G
Sbjct: 70 VEELKVGDVVVVKPGERVPVDGVVLSGTSTVDE-SALTGESVPVEKAPGDE--------- 119
Query: 314 LVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALT 373
VF + G VV +++ + KI L + + ++ + F R + L
Sbjct: 120 -VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLA 178
Query: 374 LGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRL 433
+ A+ L + W + ++V P L+ + + A +++
Sbjct: 179 I-ALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGG 237
Query: 434 QTVETLGSIRTICTDKTGTLTQNKMTV 460
+E L I+T+ DKTGTLT + V
Sbjct: 238 AALEALAKIKTVAFDKTGTLTTGRPKV 264
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 2e-22
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 20/244 (8%)
Query: 224 RKSSHITESFAKMIPTRATVIR-NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD 282
++S AK+ P+ AT++ +G ++E+ L GDIV + G+K+P D +IE +
Sbjct: 76 GRASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES 135
Query: 283 LKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILT--GSNTVMG 340
E S +TGE PV +G V T V+G+G VV T G +T +
Sbjct: 136 EVDE-SLVTGESLPVPKKVGDP----------VIAGT--VNGTGSLVVRATATGEDTTLA 182
Query: 341 KIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGII 400
+I L + ++ PI++ + + I F++ L +G +++ A + ++
Sbjct: 183 QIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFVFALEVAVTVL 242
Query: 401 VANVPEGL-LATLTVSLTLTAKRLASKNCI-VRRLQTVETLGSIRTICTDKTGTLTQNKM 458
+ P L LAT TV A LA+KN + ++ +E +I T+ DKTGTLTQ K
Sbjct: 243 IIACPCALGLATPTV--IAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKP 300
Query: 459 TVLH 462
TV
Sbjct: 301 TVTD 304
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 3e-22
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 497 CLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSL 556
LC+ A+F N++ + GD TE +L F + ++++R +P+V E+PFNS
Sbjct: 1 ALCNDAKFGENEEK---NGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSE 57
Query: 557 NKFHLTVHFSPLN-KYFLLMKGAPEVIMERCTTM 589
K TVH + Y L +KGAPE I+ERC+T+
Sbjct: 58 RKRMSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 96.9 bits (242), Expect = 2e-20
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 23/259 (8%)
Query: 212 CIVTGMFS---FYQER---KSSHITESFAKMIPTRATVIR-NGSVKEIDSAGLVRGDIVL 264
++ +F + + R ++ + + P ATV+R +G +E+ + GDIVL
Sbjct: 178 AMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVL 237
Query: 265 LKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSG 324
++ G+++P D ++ E S LTGE PV G VF T + G
Sbjct: 238 VRPGERIPVDGVVVSGSSSVDE-SMLTGESLPVEKKPGDE----------VFAGTVNLDG 286
Query: 325 SGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLL-AL 383
S V G++T + +I L + PI++ L + A+ F L L
Sbjct: 287 SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPL 346
Query: 384 YIGYNWLNACVYVIGIIVANVPEGL-LATLTVSLTLTAKRLASKNCI-VRRLQTVETLGS 441
+ G +W A + ++V P L LAT T L + A++ I ++ + +E L
Sbjct: 347 FGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGR--AARRGILIKGGEALERLAK 404
Query: 442 IRTICTDKTGTLTQNKMTV 460
+ T+ DKTGTLT+ K V
Sbjct: 405 VDTVVFDKTGTLTEGKPEV 423
|
Length = 713 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 8e-20
Identities = 63/196 (32%), Positives = 93/196 (47%), Gaps = 44/196 (22%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
+ L+++ DP R A+ HKAG R++M+TGD+P TA AIA + I D V
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI-------DEV 692
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
G L D + +++L QS VA+ GDG+NDAPA
Sbjct: 693 IAGV---------LPD----------GKAEAIKRL------QSQGRQVAMVGDGINDAPA 727
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNI 832
L +AD+GIAMG GS+V+ +TA + LM + + + R N+K++
Sbjct: 728 LAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQN--------- 777
Query: 833 PEILPFLFYIFLGIPL 848
+L Y LGIP+
Sbjct: 778 --LLGAFIYNSLGIPI 791
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 94.0 bits (233), Expect = 1e-19
Identities = 133/601 (22%), Positives = 241/601 (40%), Gaps = 130/601 (21%)
Query: 246 NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN 305
+GS + ID++ L +G IV + G+++P D ++I+ + S++TGE PV G
Sbjct: 112 DGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-GLATVDESAITGESAPVIKESGG-- 168
Query: 306 SFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMR 365
+ V T++ S + + ++ + K+ GL +K TP E+ F
Sbjct: 169 -----DFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTP--NEIALFTL 221
Query: 366 LISMWALTLGAIC--FLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRL 423
L+++ + L I + LA ++ +N + +I + V +P + L+ R+
Sbjct: 222 LMTLTIIFLVVILTMYPLAKFLNFNL--SIAMLIALAVCLIPTTIGGLLSAIGIAGMDRV 279
Query: 424 ASKNCIVRRLQTVETLGSIRTICTDKTGTLTQ-NKMTVLHLSFNREIYHVKNGVDVDIQN 482
N + + ++VET G + + DKTGT+T N+M +
Sbjct: 280 TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPV----------------- 322
Query: 483 FETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVR 542
+++++ LV+AA S A+ P +I + I Q+V
Sbjct: 323 --KSSSFERLVKAAYESSIADDTPEGRSIVKLAY---------------KQHIDLPQEVG 365
Query: 543 NTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAE 602
P E + V F+ Y KGAP +++R KEA
Sbjct: 366 EYIPFTAETRMSG-------VKFTTREVY----KGAPNSMVKRV--------KEA--GGH 404
Query: 603 KKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYD 662
+L+ +K + KG L ++N ++G+I L D
Sbjct: 405 IPVDLDALVKGVSKKGGTPLVVL-----EDNE-------------------ILGVIYLKD 440
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKIT 722
+ + + + GI +M TGD+ TA IA
Sbjct: 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIA------------------------- 475
Query: 723 DEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782
E + A P K+ ++ Q+ IVA+TGDG NDAPAL +A++G+AM
Sbjct: 476 -------KEAGVDRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAM 528
Query: 783 GITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPE---ILPFL 839
+G+ +K+ A++I +D N ++ + G+ + + +A++I + ILP +
Sbjct: 529 N-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAM 587
Query: 840 F 840
F
Sbjct: 588 F 588
|
Length = 673 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 2e-18
Identities = 148/736 (20%), Positives = 241/736 (32%), Gaps = 209/736 (28%)
Query: 239 TRATVIRNGSV-KEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPV 297
V+ EI L GDIV +K +++PAD+ L L + G
Sbjct: 85 RLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLL-----LSSSEPD--GVCYVE 137
Query: 298 TCTL-GATN----------------------SFAVES----RNLVFFSTNLV-------- 322
T L G TN S +E +L F N+
Sbjct: 138 TANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYP 197
Query: 323 ---------------SGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQH----- 362
+ GVV+ TG +T + + A K + +E+E+
Sbjct: 198 LSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAP---SKRSRLEKELNFLIIIL 254
Query: 363 FMRLISMWALTLGAIC------------FLLALYIGYNWLNACVYVI--GIIVAN--VPE 406
F L + L ++ N + +I+ + +P
Sbjct: 255 FCLLFVL-CLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313
Query: 407 GLLATLTVSLTLTAKRLASKN----------CIVRRLQTVETLGSIRTICTDKTGTLTQN 456
L +L + ++ A + S VR E LG + I +DKTGTLTQN
Sbjct: 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQN 373
Query: 457 KMTVLHLSFNREIY-----HVKNGVDVDIQNFETNTTY---------------------- 489
M S Y +K+G+ + ++ N
Sbjct: 374 IMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTN 433
Query: 490 -------KTLVRAACLCSKAEFEPNQDNIPMRERKA-SGD-------ATEVGILHFIQPR 534
A LC E N D +A S D A +VG + F +
Sbjct: 434 KPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTP 493
Query: 535 -----IKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTM 589
+ + + + + FNS K + +P + LL KGA VI +R
Sbjct: 494 KSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRL--- 550
Query: 590 MAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNN---FPVNFKFSTDPM- 645
S + E K LE+ +AS+G R L A L + + + ++ +
Sbjct: 551 ---SSGGNQVNEETKEHLEN----YASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALT 603
Query: 646 ----------NFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA 695
L+G ++ D + VP+ I+ +AGI++ ++TGD TA
Sbjct: 604 DREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAIN 663
Query: 696 IAIKC---------HILSETSSDDNVFTGTDLRKI---TDEELKDILETN--------KE 735
I C +++ S D ++ T EE ++ ++ K
Sbjct: 664 IGYSCRLLSRNMEQIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKS 723
Query: 736 LVFA----------------------RTSPLQKLRIVELYQ-SLDEIVAVTGDGVNDAPA 772
L +A R SP QK +V L + S + GDG ND
Sbjct: 724 LGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSM 783
Query: 773 LKKADIGIAMGITGSE 788
+++AD+G+ GI+G E
Sbjct: 784 IQEADVGV--GISGKE 797
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 3e-18
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 33/150 (22%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
R++G+I L D +P + + K GI+ +M+TGD+P TA AIA +E DD
Sbjct: 435 RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA------AEAGVDD-- 486
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
A +P KL ++ Q+ +VA+TGDG NDAPA
Sbjct: 487 ------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPA 522
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDN 802
L +AD+G+AM +G++ +K+ +M+ +D N
Sbjct: 523 LAQADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 2e-17
Identities = 70/220 (31%), Positives = 96/220 (43%), Gaps = 57/220 (25%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
++GLI+L D R AI GI+ +M+TGD+P A AIA +
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE------------- 604
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
G D R A P K++ V +A+ GDG+NDAPA
Sbjct: 605 -LGIDFR-------------------AGLLPEDKVKAVTELNQ-HAPLAMVGDGINDAPA 643
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNI 832
+K A IGIAMG +G++V+ +TAD L + + IE R N++++I L
Sbjct: 644 MKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALG--- 699
Query: 833 PEILPFLFYIFLGIPLPVSTVTVLCIDLG-TDMWPAVSLA 871
L IFL VT L LG T +W AV LA
Sbjct: 700 ------LKAIFL--------VTTL---LGITGLWLAV-LA 721
|
Length = 741 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 6e-16
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 847 PLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLG 906
PLP++ + +L I+L TD PA++L +E PE ++M R PR P + L RKL+ G
Sbjct: 1 PLPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKP-KEPLFSRKLLRRILL-QG 58
Query: 907 ILETLAGFLTYFHVMYDAGWDPMDL 931
+L + L +F + G L
Sbjct: 59 LLIAIVTLLVFFLGLLGFGISESGL 83
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 75.0 bits (184), Expect = 3e-15
Identities = 44/208 (21%), Positives = 71/208 (34%), Gaps = 36/208 (17%)
Query: 574 LMKGAPEVIMERCTTMMAESDKEAFLTAEKKY----ELEDKIKLFASKGERVLAFADLHL 629
L G P V A + A + A + E+ ++ + + L
Sbjct: 12 LTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELL 71
Query: 630 GQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDH 689
V ++GLI+L DP P +A+ +AGI++ ++TGD+
Sbjct: 72 RAGATVVAVLD-----------LVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDN 120
Query: 690 PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749
TA AIA + D + + + + + P
Sbjct: 121 RLTANAIARLLGL------FDALVSA---------------DLYGLVGVGKPDPKIFELA 159
Query: 750 VELYQSLDEIVAVTGDGVNDAPALKKAD 777
+E E V + GDGVND PA K A
Sbjct: 160 LEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 2e-14
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 112 DIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRG 171
++D H + LEE+ L T ++GLS E RRLE+ GPN LP + + + +
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 172 FSALLWFGALLSFLA 186
+L A+LS L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 4e-12
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 115 EHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSA 174
H + +EE+ + L T ++GL+E E + RLEK GPN LP+K + + +
Sbjct: 1 WHTLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 175 LLWFGALLS 183
+L A++S
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 2e-07
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 53/188 (28%)
Query: 652 FRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS------- 704
++G ++ D + VP+AI++ AGI+V ++TGD TA +I +L+
Sbjct: 715 LTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQII 774
Query: 705 ---------------------------------ETSSDDN------VFTGTDLRKITDEE 725
SS + GT L + D E
Sbjct: 775 INSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSE 834
Query: 726 LKDIL----ETNKELVFARTSPLQKLRIVELYQS-LDEIVAVTGDGVNDAPALKKADIGI 780
L++ L ++ R +PLQK IV L ++ ++ GDG ND ++ AD+G+
Sbjct: 835 LEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV 894
Query: 781 AMGITGSE 788
GI+G E
Sbjct: 895 --GISGQE 900
|
Length = 1178 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITD 723
P V +A+ + GI++ + T + + + D V T
Sbjct: 25 LYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY---FDPVITSNGAAIYYP 81
Query: 724 EELKDILETNKELVFARTSPLQK-LRIVELYQSLDEIVAVTGDGVNDAPALKKA-DIGIA 781
+E + ++ L L+++ + +E++ V GD +ND K A +G+A
Sbjct: 82 KEGLFLGGGPFDIGKPNPDKLLAALKLLGVD--PEEVLMV-GDSLNDIEMAKAAGGLGVA 138
Query: 782 M 782
+
Sbjct: 139 V 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 23/127 (18%)
Query: 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS----SDDNVFTGT 716
+ P + + A AG +V++++G + IA + I + DD TG
Sbjct: 75 FLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR 134
Query: 717 DLRKITDEELKDILETNKELVFARTSPLQKLRIV--ELYQSLDEIVAVTGDGVNDAPALK 774
+ I D E K + LR + EL L+E VA GD ND P L+
Sbjct: 135 VVGPICDGEGKA----------------KALRELAAELGIPLEETVAY-GDSANDLPMLE 177
Query: 775 KADIGIA 781
A + IA
Sbjct: 178 AAGLPIA 184
|
Length = 212 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 8e-06
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 23/150 (15%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHI----LSETSSDDNVFTGTDL 718
P + + + G +V +++G A+ + K + + +D TG
Sbjct: 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVE 144
Query: 719 RKITDEELKDILETNKELVFARTSPLQKLRIVELYQ-SLDEIVAVTGDGVNDAPALKKAD 777
I D K +T L ++ S + VAV GDG ND +K A
Sbjct: 145 GPIVDASYK-----------GKT----LLILLRKEGISPENTVAV-GDGANDLSMIKAAG 188
Query: 778 IGIAMGITGSEVSKQTADMILMDDNFASIV 807
+GIA +Q AD+ + + I+
Sbjct: 189 LGIAFN--AKPKLQQKADICINKKDLTDIL 216
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 711 NVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDA 770
+++ + RK + +L + + E VFA P K +I+ + E V + G+G ND
Sbjct: 47 DIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDI 106
Query: 771 PALKKADIGIAMGITGSEVSKQ---TADMILMDDNFASIVL 808
AL++AD+GI I V ++ TAD++L + +L
Sbjct: 107 LALREADLGI-CTIQQEGVPERLLLTADVVLKEIAEILDLL 146
|
Length = 152 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-05
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 748 RIVELYQ-SLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
+ E SL++++A GDG+ND L+ A G+AMG E K AD +
Sbjct: 195 SLAEALGISLEDVIAF-GDGMNDIEMLEAAGYGVAMG-NADEELKALADYV 243
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 705 ETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKL---------------RI 749
D+ + +I +E ++ + + +L +S R+
Sbjct: 138 AELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRL 197
Query: 750 VELYQ-SLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVL 808
+L L+E++A GD ND L+ A +G+AMG E K+ AD + ++ +
Sbjct: 198 AKLLGIKLEEVIAF-GDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAE 255
Query: 809 GIEEGRLI 816
+E+ L+
Sbjct: 256 ALEKLLLL 263
|
Length = 264 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.001
Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 36/166 (21%)
Query: 664 PRPAVPDAIDACHKAGIRVIMVTGDH-------PCTAKAIAIKCHILSETSSDDNVFTGT 716
+ V + I+ + + +++ T D D +
Sbjct: 80 SKEDVKEIIEYLKENNLSILLYTDDGAYILNDVSEKIVREERYVKSFVLVIDDFELLEDE 139
Query: 717 DLRKI----TDEELKDILET-----NKELVFARTSP---------------LQKLRIVEL 752
D+ KI E+L ++ + + + P L+ L +
Sbjct: 140 DINKILIVTDPEDLDELEKELKELFGSLITITSSGPGYLEIMPKGVSKGTALKAL--AKH 197
Query: 753 YQ-SLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
L+E++A GDG ND L+ A +G+AMG S K AD +
Sbjct: 198 LGIDLEEVIAF-GDGENDIEMLELAGLGVAMG-NASPEVKAAADYV 241
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 0.002
Identities = 80/357 (22%), Positives = 139/357 (38%), Gaps = 87/357 (24%)
Query: 177 WFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE------------- 223
G++L+ + + + + + L T +F+ + E
Sbjct: 40 EVGSILTTILTIAP---LLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADS 96
Query: 224 -RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD 282
R + ++FA+ + G+ +E+ + L +GDIVL++ G+ +PAD +IE
Sbjct: 97 LRGAK--KDTFARKL------REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE--G 146
Query: 283 LKAEN-SSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSN---TV 338
+ + + S++TGE PV G + V T ++S +VI +N +
Sbjct: 147 VASVDESAITGESAPVIRESGGD-------FSSVTGGTRVLSDW---IVIRITANPGESF 196
Query: 339 MGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLA---LYIGYNWLNACVY 395
+ ++ L +++ TP E+ + L LT I FLL L + +
Sbjct: 197 LDRMIALVEGAKRQKTP--NEIALTILLA---GLT---IIFLLVVATLPPFAAYSGGALS 248
Query: 396 VIGIIVANVPEGLLATL---TVSLTLTA------KRLASKNCIVRRLQTVETLGSIRTIC 446
+ ++VA LL L T+ L+A R+ N I + VE G + T+
Sbjct: 249 IT-VLVA-----LLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLL 302
Query: 447 TDKTGTLT-QNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKA 502
DKTGT+T N+ E V GV + L AA L S A
Sbjct: 303 LDKTGTITLGNRQAS-------EFLPV-PGVTE-----------EELADAAQLSSLA 340
|
Length = 679 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.002
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 236 MIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVE 295
++P AT +R+G +E+ A L GD++ + G ++PAD +L+ + S+LTGE
Sbjct: 240 LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS-PFASFDESALTGESI 298
Query: 296 PV 297
PV
Sbjct: 299 PV 300
|
Length = 741 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 961 | |||
| KOG0203|consensus | 1019 | 100.0 | ||
| KOG0204|consensus | 1034 | 100.0 | ||
| KOG0202|consensus | 972 | 100.0 | ||
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0208|consensus | 1140 | 100.0 | ||
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0205|consensus | 942 | 100.0 | ||
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0206|consensus | 1151 | 100.0 | ||
| KOG0210|consensus | 1051 | 100.0 | ||
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0209|consensus | 1160 | 100.0 | ||
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0207|consensus | 951 | 100.0 | ||
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.86 | |
| KOG4383|consensus | 1354 | 99.8 | ||
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.5 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.43 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.32 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.14 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.0 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.99 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.96 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.96 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.95 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.91 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.91 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.89 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.89 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.86 | |
| PLN02887 | 580 | hydrolase family protein | 98.78 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.78 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.77 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.76 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.73 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.71 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.67 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.66 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.62 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.62 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.51 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.46 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.34 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.33 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.33 | |
| KOG1615|consensus | 227 | 98.27 | ||
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.17 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.16 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.06 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.05 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.99 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.89 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.89 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.88 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.87 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.82 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.81 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.77 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.73 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.72 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.65 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.62 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.45 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.44 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.33 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.24 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.23 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.16 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.04 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.9 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.9 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.82 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.79 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.74 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.67 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.67 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.65 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.61 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.52 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.46 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.44 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.43 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.35 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.31 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.29 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.23 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.18 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.12 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.08 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.89 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.88 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.86 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.77 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.74 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.69 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.61 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.43 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.36 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.31 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.26 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.11 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.1 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.02 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.01 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 94.96 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 94.79 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.68 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.68 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.6 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.52 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.42 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.34 | |
| PLN02940 | 382 | riboflavin kinase | 94.19 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.72 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.57 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.41 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.19 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.15 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.13 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 92.78 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.62 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.41 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.32 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 92.27 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 92.25 | |
| PLN02811 | 220 | hydrolase | 92.21 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.61 | |
| KOG3120|consensus | 256 | 91.02 | ||
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.26 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 90.22 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 90.11 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 89.99 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 89.66 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 89.4 | |
| PLN03017 | 366 | trehalose-phosphatase | 89.16 | |
| PLN02580 | 384 | trehalose-phosphatase | 88.75 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 88.61 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 88.44 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.08 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 86.62 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 85.15 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 84.91 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 84.32 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 83.03 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.4 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 82.39 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 82.31 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 81.77 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 81.73 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 81.15 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 81.13 |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-153 Score=1286.77 Aligned_cols=859 Identities=53% Similarity=0.885 Sum_probs=824.5
Q ss_pred cHHHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHH
Q psy6866 100 DVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFG 179 (961)
Q Consensus 100 ~~~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ 179 (961)
..++++.++++.++++|..+.++++++|.+|..+|||.+++.+++.+.|||.++||++.+.|.+|++++|..|.+++|++
T Consensus 24 ~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~ 103 (1019)
T KOG0203|consen 24 KKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIG 103 (1019)
T ss_pred hhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHH
Confidence 46788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCccc
Q psy6866 180 ALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVR 259 (961)
Q Consensus 180 ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~ 259 (961)
+++++++|++.....+....+++|.+++++.+++++++..|||+.+..+.++.++++.|..++|+|||+...+.++||||
T Consensus 104 a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVv 183 (1019)
T KOG0203|consen 104 AILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVV 183 (1019)
T ss_pred HHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhccc
Confidence 99999999998877777777889999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChh
Q psy6866 260 GDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVM 339 (961)
Q Consensus 260 GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~ 339 (961)
||+|.++.||+||||.+++++.++++|+|+|||||+|..+.+...+.++++..|+.|.+|.+++|.+.|+|++||.+|.+
T Consensus 184 GD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~ 263 (1019)
T KOG0203|consen 184 GDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVM 263 (1019)
T ss_pred ccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHH
Q psy6866 340 GKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLT 419 (961)
Q Consensus 340 g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~ 419 (961)
|+|+.+.......++|+++++++|..++..+++++++.+|++....++.|..++.+.+.++++.+|+||+.+++.++...
T Consensus 264 G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlt 343 (1019)
T KOG0203|consen 264 GRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLT 343 (1019)
T ss_pred eehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHH
Confidence 99999999989999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccC-CchHHHHHHHHHHH
Q psy6866 420 AKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACL 498 (961)
Q Consensus 420 ~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 498 (961)
++||+++++++|++.++|+||+.++||+|||||||+|+|+|.++|+++.....+...+..++.+. .+..+..+.+++++
T Consensus 344 akrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~l 423 (1019)
T KOG0203|consen 344 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATL 423 (1019)
T ss_pred HHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988877766666665544 46788899999999
Q ss_pred ccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCC---CeEEEEE
Q psy6866 499 CSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPL---NKYFLLM 575 (961)
Q Consensus 499 c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~---~~~~~~~ 575 (961)
||.+.+.+++.+.|..+....||+.|.||++|+.....+....|+.++++.++||||.+|++.+++...+ .++.+.+
T Consensus 424 Cn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~m 503 (1019)
T KOG0203|consen 424 CNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVM 503 (1019)
T ss_pred hCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeee
Confidence 9999999999999999999999999999999999877777889999999999999999999999998754 4688999
Q ss_pred eCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEE
Q psy6866 576 KGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLI 655 (961)
Q Consensus 576 KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~l 655 (961)
|||||.++++|+.+.. +|++.+++++.++.+.+...++...|.||++|+++.++.++++....++.+..++.-.++.|+
T Consensus 504 KGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~Fl 582 (1019)
T KOG0203|consen 504 KGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFL 582 (1019)
T ss_pred cCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcccc
Confidence 9999999999999988 899999999999999999999999999999999999999999999889988889999999999
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---------------------CceeEe
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------------------DDNVFT 714 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------------------~~~v~~ 714 (961)
|++++.||+|..+++++..||.|||+|+|+|||++.||+++|++.||+.++.. .+.|++
T Consensus 583 Gl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vih 662 (1019)
T KOG0203|consen 583 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIH 662 (1019)
T ss_pred chhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEe
Confidence 99999999999999999999999999999999999999999999998775443 367899
Q ss_pred chhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhcc
Q psy6866 715 GTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTA 794 (961)
Q Consensus 715 g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aa 794 (961)
|.++.+++.+++++++.+.++.||||.||+||+.||+.+|++|.+|+++|||.||+||||+||||||||++|+|++|+||
T Consensus 663 G~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAA 742 (1019)
T KOG0203|consen 663 GSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 742 (1019)
T ss_pred cccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccC
Q psy6866 795 DMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEK 874 (961)
Q Consensus 795 d~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~ 874 (961)
|+||+||||++|+..+++||.+|+|+||.+.|.++.|+.++.+++++.++|+|+|+.++++|.++|++|++||++||||+
T Consensus 743 DmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~ 822 (1019)
T KOG0203|consen 743 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEK 822 (1019)
T ss_pred ceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccccccCCC--CccccccCccc
Q psy6866 875 PESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMW 952 (961)
Q Consensus 875 ~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 952 (961)
|+.++|.|+||+|+.++++|.+++.++|+|+|+++++++|++||+.++.+||.|..+.|++..|++. +|++++|||+|
T Consensus 823 aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeW 902 (1019)
T KOG0203|consen 823 AESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEW 902 (1019)
T ss_pred chhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccccc
Q psy6866 953 TRTERTW 959 (961)
Q Consensus 953 ~~~~~~~ 959 (961)
+|++|+.
T Consensus 903 tyeqRk~ 909 (1019)
T KOG0203|consen 903 TYEQRKY 909 (1019)
T ss_pred cHHHHHH
Confidence 9999974
|
|
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-145 Score=1224.90 Aligned_cols=852 Identities=29% Similarity=0.419 Sum_probs=705.1
Q ss_pred ccccccccccCCCCccceeEEeecccccccccccccccchhhhhhhhcccccCCC--cccccccHHHHHHHhhhhccccH
Q psy6866 24 GSRKKKSWSSKHNTTKDVNIYMSSATKNNYFEKLSTQSKTFFNTRKASLEKKSHP--RFVLDCSKKSILRFIHKEKEMDV 101 (961)
Q Consensus 24 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 101 (961)
..||+ ...++.+.+.|.||.+.+-+...+.+...-+.......+++-.....+. -+.+....+++.+.....
T Consensus 19 ~~~~~-~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~~~~i~~e~l~~i~~~~----- 92 (1034)
T KOG0204|consen 19 LQRWR-LAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEYTLGIGAEELVKIVKEH----- 92 (1034)
T ss_pred hhhhh-hhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhccccccccccccCHHHHHHHhhcc-----
Confidence 44555 6668888888888888766554444444322222222333222222211 112223334454432221
Q ss_pred HHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHH
Q psy6866 102 AQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSE--LEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFG 179 (961)
Q Consensus 102 ~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~--~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ 179 (961)
....|+. .+++++++++|+|||..||+. ++..+|++.||.|.+++++++++|++.|+.+.+.-.++|.++
T Consensus 93 -~~~~L~~-------~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~va 164 (1034)
T KOG0204|consen 93 -DLKALNA-------YGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVA 164 (1034)
T ss_pred -chhhhhh-------ccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHH
Confidence 1222222 589999999999999999996 788999999999999999999999999999777777888888
Q ss_pred HHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCccc
Q psy6866 180 ALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVR 259 (961)
Q Consensus 180 ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~ 259 (961)
|++|+.. ++......++|+++..+.+.++++++++++.+|.|+.+.++..+.-+ ..++.|+|||+.++|+..||||
T Consensus 165 AvvSl~l-gi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~---~~k~~ViR~G~r~~isI~diVV 240 (1034)
T KOG0204|consen 165 AVVSLGL-GIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKR---NIKFQVIRGGRRQQISIYDLVV 240 (1034)
T ss_pred HHHHHhh-hhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhh---ceEEEEEECCEEEEEEEeeeee
Confidence 8888654 33333334455555555556667778899999999988777653322 3589999999999999999999
Q ss_pred ceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChh
Q psy6866 260 GDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVM 339 (961)
Q Consensus 260 GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~ 339 (961)
|||+.|+.||.+||||++++|++|.+|||+|||||+++.|.... +.++++||++.+|+++++|+.+|.+|+.
T Consensus 241 GDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~--------dPfLlSGTkv~eGsgkMlVTaVGmnt~w 312 (1034)
T KOG0204|consen 241 GDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDK--------DPFLLSGTKVMEGSGKMLVTAVGMNTQW 312 (1034)
T ss_pred ccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCC--------CCeEeecceeecCcceEEEEEeeecchH
Confidence 99999999999999999999999999999999999999998742 2369999999999999999999999999
Q ss_pred hhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---h---------cc--------HHHHHHHHHHh
Q psy6866 340 GKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYI---G---------YN--------WLNACVYVIGI 399 (961)
Q Consensus 340 g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~---~---------~~--------~~~~~~~~i~v 399 (961)
|+++..+.....++||+|-++++++..+..+.++++++.+++.... + .. +...+..++++
T Consensus 313 G~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTi 392 (1034)
T KOG0204|consen 313 GIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTI 392 (1034)
T ss_pred hhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEE
Confidence 9999999988889999999999999998888777776666554321 1 11 23445566779
Q ss_pred hhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccc
Q psy6866 400 IVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVD 479 (961)
Q Consensus 400 lv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 479 (961)
+|+|+|+|||+|+++++++++++|+++++|||++++||+||++++||+|||||||.|+|+|++.|++++.+..+....
T Consensus 393 lVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~-- 470 (1034)
T KOG0204|consen 393 LVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKS-- 470 (1034)
T ss_pred EEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999988876433221
Q ss_pred ccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCee
Q psy6866 480 IQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKF 559 (961)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~ 559 (961)
... +....+.++...+.+++.+...++.. .....+.|+|+|+|+|.|....+.+++..|.+....+.+||||.+|+
T Consensus 471 -~~l-~~~~~~ll~~gI~~Nt~g~v~~~~~~--g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~ 546 (1034)
T KOG0204|consen 471 -SNL-PPSLLDLLLQGIAQNTTGSVVKPEKG--GEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKR 546 (1034)
T ss_pred -ccC-CHHHHHHHHHHHhhcCCCeEEecCCC--CcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccce
Confidence 111 22334456667777665544332221 12457889999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCcc
Q psy6866 560 HLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK 639 (961)
Q Consensus 560 ~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~ 639 (961)
|+++++.+++..++|+|||+|+|+..|+.+...+|+..+++++.+..+++.++.||++|+|++|+||+++.... ..+
T Consensus 547 ~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~---~~~ 623 (1034)
T KOG0204|consen 547 MGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGP---DEE 623 (1034)
T ss_pred eeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCC---CCC
Confidence 99999987777239999999999999999999999999999999999999999999999999999999865431 111
Q ss_pred CCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhc
Q psy6866 640 FSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLR 719 (961)
Q Consensus 640 ~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~ 719 (961)
.+.+..+..+.||+++|++|++||+||+++++|+.||+|||.|.|+||||..||++||.+|||.+++.. ..+++|++|+
T Consensus 624 ~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d-~~~lEG~eFr 702 (1034)
T KOG0204|consen 624 PSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD-FLALEGKEFR 702 (1034)
T ss_pred CCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc-cceecchhhh
Confidence 233344567899999999999999999999999999999999999999999999999999999988754 7899999999
Q ss_pred cCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEee
Q psy6866 720 KITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILM 799 (961)
Q Consensus 720 ~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~ 799 (961)
++++++.++++++.+ |+||.+|.||+.+|+.|+++|++||++|||+||+|||++||||+|||+.|+|+|||+||+|++
T Consensus 703 ~~s~ee~~~i~pkl~--VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 703 ELSQEERDKIWPKLR--VLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred hcCHHHHHhhhhhhe--eeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEE
Confidence 999999999999987 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCc
Q psy6866 800 DDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNI 879 (961)
Q Consensus 800 ~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~ 879 (961)
||||++|+++++|||+.|+||+||+||+|+.|+++++..|..++.....||+++|+||+|||||++++||||+|||++++
T Consensus 781 DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~L 860 (1034)
T KOG0204|consen 781 DDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDEL 860 (1034)
T ss_pred cCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHH
Confidence 99999999999999999999999999999999999998888888888999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHH
Q psy6866 880 MSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFL 915 (961)
Q Consensus 880 ~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 915 (961)
|.|+|..+ .++++++-|+...+.| .+++.+..|.
T Consensus 861 m~RkP~GR-~~~LIt~tMwknil~q-a~YQl~vl~i 894 (1034)
T KOG0204|consen 861 MKRKPVGR-TKPLITRTMWKNILGQ-AVYQLIVLFI 894 (1034)
T ss_pred hcCCCCCC-CCcchHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999864 6888886655443332 4444444443
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-145 Score=1225.06 Aligned_cols=788 Identities=36% Similarity=0.546 Sum_probs=688.8
Q ss_pred ccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccC
Q psy6866 115 EHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETN 194 (961)
Q Consensus 115 ~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~ 194 (961)
.|..+.++.+..|+|++.+|||.+|+..|++.||+|+++....+|+|+++++||-+++..+|+.+|++|++...
T Consensus 4 ~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------ 77 (972)
T KOG0202|consen 4 AHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------ 77 (972)
T ss_pred hhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh------
Confidence 45688999999999999999999999999999999999999999999999999999999999999999987632
Q ss_pred CCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeecc
Q psy6866 195 EEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274 (961)
Q Consensus 195 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD 274 (961)
|..+++|++++++++.+.+|||+++++++++|+++.|+.++|+|+|+.+.+++.||||||||.|+-||+||||
T Consensus 78 -------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPAD 150 (972)
T KOG0202|consen 78 -------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPAD 150 (972)
T ss_pred -------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccc
Confidence 2346677777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCceeeccCccccccceeccCCCCC----CccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhcccc
Q psy6866 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATN----SFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLE 350 (961)
Q Consensus 275 ~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~----~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~ 350 (961)
.+|++..++.+|||+|||||.||.|...... ....+++|++|+||.|..|.++|+|+.||.+|.+|+|.+.++..+
T Consensus 151 lRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e 230 (972)
T KOG0202|consen 151 LRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATE 230 (972)
T ss_pred eeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccC
Confidence 9999999999999999999999999765432 223467899999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh-----h---ccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHH
Q psy6866 351 KKTTPIEQEVQHFMRLISMWALTLGAICFLL--ALYI-----G---YNWLNACVYVIGIIVANVPEGLLATLTVSLTLTA 420 (961)
Q Consensus 351 ~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~--~~~~-----~---~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~ 420 (961)
..+||+|+.++.|...+..+..++++.++++ .++. + ..+...+..++++.++++|+|||+.++++++.+.
T Consensus 231 ~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~ 310 (972)
T KOG0202|consen 231 SPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGT 310 (972)
T ss_pred CCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhH
Confidence 9999999999999999884444444433333 2222 2 3456778889999999999999999999999999
Q ss_pred HHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccccccc-----------------
Q psy6866 421 KRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNF----------------- 483 (961)
Q Consensus 421 ~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~----------------- 483 (961)
+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+............+..|
T Consensus 311 ~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~ 390 (972)
T KOG0202|consen 311 RRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKA 390 (972)
T ss_pred HHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccc
Confidence 999999999999999999999999999999999999999999998765433221111111000
Q ss_pred CCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhh---------------HhhcCCeE
Q psy6866 484 ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQD---------------VRNTFPKV 548 (961)
Q Consensus 484 ~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~---------------~~~~~~~~ 548 (961)
...+.+..++.++++||.+....+.. ..+...|.|+|.||..++.+.+..... +...++++
T Consensus 391 ~~~~~l~~l~~i~~lCNda~v~~~~~----~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~ 466 (972)
T KOG0202|consen 391 GDNDLLQELAEICALCNDATVEYNDA----DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKI 466 (972)
T ss_pred cccHHHHHHHHHHHhhhhhhhhcCch----hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhe
Confidence 03456788999999999887665432 345678999999999998875432211 33456778
Q ss_pred EEecCCCCCeeEEEEEEcCCCe--EEEEEeCChHHHHHHhhcccccCC-cccccCHHHHHHHHHHHHHHHHhcCceeeEe
Q psy6866 549 TEVPFNSLNKFHLTVHFSPLNK--YFLLMKGAPEVIMERCTTMMAESD-KEAFLTAEKKYELEDKIKLFASKGERVLAFA 625 (961)
Q Consensus 549 ~~~~F~s~~k~~~~v~~~~~~~--~~~~~KGa~e~Il~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A 625 (961)
.++||+|+||+|++......+. +.+|+|||+|.|+++|++++..+| ...++++..|+.+.+...+|+++|+||+|+|
T Consensus 467 ~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA 546 (972)
T KOG0202|consen 467 AELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALA 546 (972)
T ss_pred eEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEE
Confidence 9999999999999998875553 899999999999999988887666 4599999999999999999999999999999
Q ss_pred eeecCCCCCCCCc-cCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 626 DLHLGQNNFPVNF-KFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 626 ~~~l~~~~~~~~~-~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
++..+.. .+... ..+...+...|+||+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++|+..
T Consensus 547 ~~~~~~~-~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~ 625 (972)
T KOG0202|consen 547 SKDSPGQ-VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFS 625 (972)
T ss_pred ccCCccc-ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCc
Confidence 9876531 11111 112234445789999999999999999999999999999999999999999999999999999987
Q ss_pred CCCC-CceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 705 ETSS-DDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 705 ~~~~-~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
+..+ ...+++|.+++++++++.+....+.. +|+|++|.+|.+||+.||++|++|||+|||+||+||||.||||||||
T Consensus 626 ~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~--vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 626 EDEDVSSMALTGSEFDDLSDEELDDAVRRVL--VFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred CCccccccccchhhhhcCCHHHHHHHhhcce--EEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeec
Confidence 6543 35789999999999999999888764 99999999999999999999999999999999999999999999999
Q ss_pred CCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhh
Q psy6866 784 ITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTD 863 (961)
Q Consensus 784 ~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d 863 (961)
++|+|+||+|||+||.||||++|+.|+++||.+|+||++|+.|+++.|+.++..+++...+++|.||+|+|+||+|++||
T Consensus 704 ~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtD 783 (972)
T KOG0202|consen 704 ISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTD 783 (972)
T ss_pred CCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy6866 864 MWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDA 924 (961)
Q Consensus 864 ~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 924 (961)
.+||.+|++|||++|+|+||||++ .+++++.++|.. |+.+|++..++++++|.+.|++.
T Consensus 784 G~PA~aLG~ep~D~DiM~kpPR~~-~~~iit~~l~~r-~l~~g~~vg~~Tv~~f~~~~~~~ 842 (972)
T KOG0202|consen 784 GPPATALGFEPVDPDIMKKPPRDS-KDGIITGWLIFR-YLAIGIIVGVATVGVFVWWMYGA 842 (972)
T ss_pred CCchhhcCCCCCChhHHhCCCCCC-CCCeeeHHHHHH-HHHhheeeeeeEhHhhhHHHhcC
Confidence 999999999999999999999986 689999998887 55679998988888888887753
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-136 Score=1280.87 Aligned_cols=848 Identities=52% Similarity=0.854 Sum_probs=748.8
Q ss_pred hccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy6866 107 LKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLA 186 (961)
Q Consensus 107 l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~ 186 (961)
..+...++||..+.+++++.|+|++.+|||++|+++|+++||+|++++++++++|+.|++++++++.++||++++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~ 88 (997)
T TIGR01106 9 LKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLA 88 (997)
T ss_pred hhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 44456788999999999999999999999999999999999999999988899999999999999999999999998876
Q ss_pred hhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEec
Q psy6866 187 YLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLK 266 (961)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~ 266 (961)
+++...........+|+.+++++++++++++++++|++|+++.+++++++.+.+++|+|||++++|+++||||||+|.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~ 168 (997)
T TIGR01106 89 YGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVK 168 (997)
T ss_pred HHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEEC
Confidence 65532221212224567788888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhh
Q psy6866 267 IGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLT 346 (961)
Q Consensus 267 ~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~ 346 (961)
+||+|||||+|++|+++.||||+|||||.|+.|.+++....+++.+|++|+||.+++|++.++|++||.+|.+|++.+++
T Consensus 169 ~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~ 248 (997)
T TIGR01106 169 GGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLA 248 (997)
T ss_pred CCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhh
Confidence 99999999999999889999999999999999998876566778899999999999999999999999999999999988
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcc
Q psy6866 347 NRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASK 426 (961)
Q Consensus 347 ~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~ 426 (961)
...+.+++|+++.++++...++.+++++++++++++.+.+.+|...+.+++++++++|||+||++++++++.++++|+++
T Consensus 249 ~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~ 328 (997)
T TIGR01106 249 SGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARK 328 (997)
T ss_pred hhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHC
Confidence 88888899999999999999999888888888887777778898999999999999999999999999999999999999
Q ss_pred cccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccC-CchHHHHHHHHHHHccCceec
Q psy6866 427 NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFE 505 (961)
Q Consensus 427 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~c~~~~~~ 505 (961)
|++||+++++|+||++++||||||||||+|+|+|.+++.++..+..+.........++ ....++.++.++++||++.+.
T Consensus 329 ~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~ 408 (997)
T TIGR01106 329 NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK 408 (997)
T ss_pred CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeec
Confidence 9999999999999999999999999999999999999998877654332211111122 123455688899999988776
Q ss_pred CCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcC---CCeEEEEEeCChHHH
Q psy6866 506 PNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP---LNKYFLLMKGAPEVI 582 (961)
Q Consensus 506 ~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~---~~~~~~~~KGa~e~I 582 (961)
.+...+|...+...|||+|.|+++++.+.+.+....+..++.+.++||+|+||+|++++... ++++++|+|||||.|
T Consensus 409 ~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~I 488 (997)
T TIGR01106 409 AGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERI 488 (997)
T ss_pred cccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHH
Confidence 55555566666778999999999998866666666778899999999999999999888642 346889999999999
Q ss_pred HHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecC
Q psy6866 583 MERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYD 662 (961)
Q Consensus 583 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D 662 (961)
+++|+++.. +|...+++++.++.+.+.+++|+++|+||+++|++.++.++++....++.+..+..|+||+|+|+++++|
T Consensus 489 l~~c~~~~~-~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~D 567 (997)
T TIGR01106 489 LERCSSILI-HGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMID 567 (997)
T ss_pred HHHhhHHhc-CCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccC
Confidence 999998764 7888899999999999999999999999999999998765443322223233344589999999999999
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---------------------CceeEechhhccC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------------------DDNVFTGTDLRKI 721 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------------------~~~v~~g~~~~~~ 721 (961)
|+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++.. ...+++|.++..+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 9999999999999999999999999999999999999999865321 1379999999999
Q ss_pred CHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecC
Q psy6866 722 TDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDD 801 (961)
Q Consensus 722 ~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~ 801 (961)
+++++++++.+++..||||++|+||.++|+.+|+.|++|+|+|||.||+||||+||||||||++|+|+|+++||++++||
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecC
Confidence 99999999988777899999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCccc
Q psy6866 802 NFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMS 881 (961)
Q Consensus 802 ~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~ 881 (961)
||++|+.++++||++|+|++++++|.++.|+..+++++++.+++.|+|++++|+||+|+++|++|+++|++|||++++|+
T Consensus 728 ~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~ 807 (997)
T TIGR01106 728 NFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMK 807 (997)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccccccCCC--CccccccCcccccc
Q psy6866 882 REPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRT 955 (961)
Q Consensus 882 ~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 955 (961)
|||++++.+++++++++..+++..|++++++.|++|++.++++||.+.+++++...|.+. ++....+++.|+++
T Consensus 808 ~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 883 (997)
T TIGR01106 808 RQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYE 883 (997)
T ss_pred CCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchh
Confidence 999987778999998887777778999999999999998888999998888876666543 33334566666543
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-131 Score=1226.60 Aligned_cols=788 Identities=31% Similarity=0.472 Sum_probs=673.4
Q ss_pred ccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcc
Q psy6866 113 IDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAE 192 (961)
Q Consensus 113 ~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~ 192 (961)
.+||..+.+++.+.|+|++.+|||++|+++|+++||+|++++++++++|..++++|++++.++|+++++++++.
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~------ 78 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM------ 78 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH------
Confidence 46889999999999999998999999999999999999999988899999999999999999999999988764
Q ss_pred cCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeee
Q psy6866 193 TNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVP 272 (961)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IP 272 (961)
..|..+++++++++++++++++||+++++.+++|+++.+++++|+|||++++|+++||||||||.|++||+||
T Consensus 79 -------~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VP 151 (1053)
T TIGR01523 79 -------HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIP 151 (1053)
T ss_pred -------hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEee
Confidence 2456788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeeCCceeeccCccccccceeccCCCCC----Cc-cccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhc
Q psy6866 273 ADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN----SF-AVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347 (961)
Q Consensus 273 aD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~----~~-~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~ 347 (961)
|||+|++++++.||||+|||||.||.|.+.... .. ..++.|++|+||.|++|+++++|++||.+|.+|+|+.++.
T Consensus 152 AD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~ 231 (1053)
T TIGR01523 152 ADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQ 231 (1053)
T ss_pred ccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHh
Confidence 999999999999999999999999999875321 11 2356799999999999999999999999999999998875
Q ss_pred cccC-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Q psy6866 348 RLEK-----------------------------------KTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNA 392 (961)
Q Consensus 348 ~~~~-----------------------------------~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~ 392 (961)
.... .+||+|+++++++.+++.++++++++++++... ..+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~--~~~~~~ 309 (1053)
T TIGR01523 232 GDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF--DVDKEV 309 (1053)
T ss_pred hhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhHHH
Confidence 4221 249999999999999988888877776665432 123567
Q ss_pred HHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcc-eeee
Q psy6866 393 CVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNR-EIYH 471 (961)
Q Consensus 393 ~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~-~~~~ 471 (961)
+.++++++++++|++||++++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|+++|.++ ..+.
T Consensus 310 ~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~ 389 (1053)
T TIGR01523 310 AIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTIS 389 (1053)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEE
Confidence 778899999999999999999999999999999999999999999999999999999999999999999998764 2222
Q ss_pred ecCc---cccc-c-------------------------------cccC-----CchHHHHHHHHHHHccCceecCCCCCc
Q psy6866 472 VKNG---VDVD-I-------------------------------QNFE-----TNTTYKTLVRAACLCSKAEFEPNQDNI 511 (961)
Q Consensus 472 ~~~~---~~~~-~-------------------------------~~~~-----~~~~~~~l~~~~~~c~~~~~~~~~~~~ 511 (961)
.+.. .... + ...+ ....+..++.++++||++.+..+...
T Consensus 390 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~- 468 (1053)
T TIGR01523 390 IDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT- 468 (1053)
T ss_pred ecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCC-
Confidence 2110 0000 0 0000 01235668889999998776432111
Q ss_pred ccccccccCChhHHHHHHhhcccccch------hhH-------------------hhcCCeEEEecCCCCCeeEEEEEEc
Q psy6866 512 PMRERKASGDATEVGILHFIQPRIKSI------QDV-------------------RNTFPKVTEVPFNSLNKFHLTVHFS 566 (961)
Q Consensus 512 ~~~~~~~~g~~~e~all~~~~~~~~~~------~~~-------------------~~~~~~~~~~~F~s~~k~~~~v~~~ 566 (961)
..+...|||+|.|++.++.+.+.+. ... +..++++.++||+|+||+|+++++.
T Consensus 469 --~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~ 546 (1053)
T TIGR01523 469 --DCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYED 546 (1053)
T ss_pred --CceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEe
Confidence 1234579999999999987654321 111 2346789999999999999999986
Q ss_pred CCC-eEEEEEeCChHHHHHHhhcccccCC-cccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCC-ccCCCC
Q psy6866 567 PLN-KYFLLMKGAPEVIMERCTTMMAESD-KEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVN-FKFSTD 643 (961)
Q Consensus 567 ~~~-~~~~~~KGa~e~Il~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~-~~~~~~ 643 (961)
+++ .+++|+|||||.|+++|+.+...+| ...+++++.++++.+.+++|+++|+||+|+|||.++.+++..+ .+....
T Consensus 547 ~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~ 626 (1053)
T TIGR01523 547 NHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETL 626 (1053)
T ss_pred CCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhcccc
Confidence 544 5889999999999999997765444 4678999999999999999999999999999999875432111 000011
Q ss_pred CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-------CceeEech
Q psy6866 644 PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-------DDNVFTGT 716 (961)
Q Consensus 644 ~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-------~~~v~~g~ 716 (961)
..+.+|+||+|+|+++|+||+|++++++|+.|+++||+|+|+|||++.||.++|+++||..++.. ...+++|.
T Consensus 627 ~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~ 706 (1053)
T TIGR01523 627 NRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS 706 (1053)
T ss_pred chhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehH
Confidence 12346899999999999999999999999999999999999999999999999999999754211 24799999
Q ss_pred hhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccce
Q psy6866 717 DLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM 796 (961)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~ 796 (961)
++..+++++++++.... .||||++|+||.++|+.+|++|++|+|||||.||+|||++||||||||++|+|+|+++||+
T Consensus 707 ~l~~l~~~~l~~~~~~~--~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADi 784 (1053)
T TIGR01523 707 QFDALSDEEVDDLKALC--LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDI 784 (1053)
T ss_pred HhhhcCHHHHHHHhhcC--eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCE
Confidence 99999999999888765 4999999999999999999999999999999999999999999999998999999999999
Q ss_pred EeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHh----cC-CchhHHHHHHHHHHhhhhhhHhhhc
Q psy6866 797 ILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFL----GI-PLPVSTVTVLCIDLGTDMWPAVSLA 871 (961)
Q Consensus 797 vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~----~~-~~pl~~~q~l~i~li~d~~~~lal~ 871 (961)
++++|||.+|+.++.+||++|+|++|++.|.++.|+..+++++++.++ |. ++||+|+|+||+|+++|.+|+++|+
T Consensus 785 vl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~ 864 (1053)
T TIGR01523 785 VLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLG 864 (1053)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999988888887 34 5899999999999999999999999
Q ss_pred ccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 872 YEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMY 922 (961)
Q Consensus 872 ~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 922 (961)
+|||++++|+|||+++ .+++++++++.. ++..|++++++++++|+++++
T Consensus 865 ~e~~~~~~m~~~Pr~~-~~~l~~~~~~~~-~~~~g~~~~~~~l~~~~~~~~ 913 (1053)
T TIGR01523 865 LEKAAPDLMDRLPHDN-EVGIFQKELIID-MFAYGFFLGGSCLASFTGILY 913 (1053)
T ss_pred cCCCChhHHhcCCCCC-CccccCHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999975 678999887765 445699999988888876543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-130 Score=1206.65 Aligned_cols=774 Identities=40% Similarity=0.599 Sum_probs=688.9
Q ss_pred ccccCCCHH--HHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhh
Q psy6866 113 IDEHLIPLE--ELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLE 190 (961)
Q Consensus 113 ~~~~~~~~~--~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~ 190 (961)
..+|..+.+ ++...+.+++..||+.+|+.+|++.||+|.++..+..+.|..++.+|++++..+|++++++++....+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~ 100 (917)
T COG0474 21 ETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWV 100 (917)
T ss_pred ccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 456667777 899999999999999999999999999999999888899999999999999999999988887642211
Q ss_pred cccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCe
Q psy6866 191 AETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDK 270 (961)
Q Consensus 191 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~ 270 (961)
. ......+++.++++++++.++||+++++.+++++++.+..++|+|||++++|+++||||||||.|++||+
T Consensus 101 ~---------~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 101 D---------AGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred c---------cCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 0 0023345566777788889999999999999999999999999999999999999999999999999999
Q ss_pred eeccEEEEeeCCceeeccCccccccceeccCCCCCC--cc--ccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhh
Q psy6866 271 VPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNS--FA--VESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLT 346 (961)
Q Consensus 271 IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~--~~--~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~ 346 (961)
||||++|++++++.||||+|||||.|+.|.+..... .+ .++.|++|+||.|.+|++.|+|++||.+|.+|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 999999999999999999999999999998764431 11 36789999999999999999999999999999999998
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhc
Q psy6866 347 NRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYN-WLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLAS 425 (961)
Q Consensus 347 ~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~-~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k 425 (961)
.......+|+++.++++...+..++++++++.+++..+.+.. |...+.++++++++++|++||+.++++++.++.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 887688999999999999999999999999988888776555 8999999999999999999999999999999999999
Q ss_pred ccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceec
Q psy6866 426 KNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFE 505 (961)
Q Consensus 426 ~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~ 505 (961)
++++||+++++|+||++++||||||||||+|+|+|.+++..+.. .+.+......++....++..+++||+....
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~ 405 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG------KDIDDKDLKDSPALLRFLLAAALCNSVTPE 405 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc------ccccccccccchHHHHHHHHHHhcCccccc
Confidence 99999999999999999999999999999999999999987410 000101111234445688899999987654
Q ss_pred CCCCCcccccccccCChhHHHHHHhhccccc--chhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHH
Q psy6866 506 PNQDNIPMRERKASGDATEVGILHFIQPRIK--SIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIM 583 (961)
Q Consensus 506 ~~~~~~~~~~~~~~g~~~e~all~~~~~~~~--~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il 583 (961)
.+ + ++..|||+|.|+++++.+.+. +....+..++++.++||+|.||||+++++..++++++++|||||.|+
T Consensus 406 ~~-~------~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il 478 (917)
T COG0474 406 KN-G------WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVIL 478 (917)
T ss_pred cc-C------ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHH
Confidence 33 2 577899999999999998776 67777778889999999999999999999777779999999999999
Q ss_pred HHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCC
Q psy6866 584 ERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDP 663 (961)
Q Consensus 584 ~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~ 663 (961)
++|++. +...+++++.++.+++..++|+++|+||+++|||.++..+... .. +..|+||+|+|+++|+||
T Consensus 479 ~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~------~~-~~~E~dl~~lGl~g~~Dp 547 (917)
T COG0474 479 ERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD------EV-DEIESDLVFLGLTGIEDP 547 (917)
T ss_pred HHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc------hh-hhhhccceeehhhhccCC
Confidence 999976 6777889999999999999999999999999999765432111 11 457899999999999999
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
||++++++|+.|++|||++||+||||+.||++||++||+..+... ..+++|.++..++++++.+.++++. ||||++|
T Consensus 548 pr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~-~~vi~G~el~~l~~~el~~~~~~~~--VfARvsP 624 (917)
T COG0474 548 PREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES-ALVIDGAELDALSDEELAELVEELS--VFARVSP 624 (917)
T ss_pred CCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc-eeEeehHHhhhcCHHHHHHHhhhCc--EEEEcCH
Confidence 999999999999999999999999999999999999999776433 5699999999999999999999987 9999999
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHH
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKS 823 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~ 823 (961)
+||.++|+.+|++|++|+|||||+||+||||+||||||||.+|+|+||++||+++.+++|..|+.++++||++|.|++|+
T Consensus 625 ~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~ 704 (917)
T COG0474 625 EQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKF 704 (917)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred HHHHHhhhHhhHHHHHHHHHhcCC-chhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHH
Q psy6866 824 IAYILASNIPEILPFLFYIFLGIP-LPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAY 902 (961)
Q Consensus 824 i~~~l~~ni~~i~~~~~~~~~~~~-~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~ 902 (961)
+.|.++.|+.+++.++++.+++.+ +|++++|+||+|+++|.+|+++|+.++|+.+.|.+||+.+ ..++++++.++..+
T Consensus 705 i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p-~~~i~~~~~~~~~i 783 (917)
T COG0474 705 ILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGP-EEGLFNRKIFWRFI 783 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCc-cccccchhHHHHHH
Confidence 999999999999999999888888 9999999999999999999999999999999999999876 57889999888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q psy6866 903 FHLGILETLAGFLTYFHVMYD 923 (961)
Q Consensus 903 ~~~g~~~~~~~~~~~~~~~~~ 923 (961)
++.|+..+++.+++|.++...
T Consensus 784 ~~~~~~~~i~~~~~~~~~~~~ 804 (917)
T COG0474 784 LIIGLLSAILFILTFLLYLLG 804 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 777888888887777776554
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-124 Score=1156.00 Aligned_cols=735 Identities=28% Similarity=0.441 Sum_probs=645.2
Q ss_pred CCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCC
Q psy6866 117 LIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEE 196 (961)
Q Consensus 117 ~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~ 196 (961)
..+.+++++.|++++ +|||++|+++|+++||+|+++.+++.++|+.++++|+++|.++|+++++++++.
T Consensus 51 ~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~---------- 119 (902)
T PRK10517 51 VMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT---------- 119 (902)
T ss_pred cCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH----------
Confidence 567889999999987 699999999999999999999998889999999999999999999998888653
Q ss_pred CCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEEC------CeEEEEECCCcccceEEEecCCCe
Q psy6866 197 KPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRN------GSVKEIDSAGLVRGDIVLLKIGDK 270 (961)
Q Consensus 197 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~------G~~~~I~~~eLv~GDIV~l~~Gd~ 270 (961)
+.+..+++++++++++++++++||+|+++.+++|+++.+.+++|+|| |++++|+++||||||||.|++||+
T Consensus 120 ---~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 120 ---EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 23566778888889999999999999999999999999999999999 789999999999999999999999
Q ss_pred eeccEEEEeeCCceeeccCccccccceeccCCCCC---CccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhc
Q psy6866 271 VPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN---SFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347 (961)
Q Consensus 271 IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~---~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~ 347 (961)
|||||+|++|+++.||||+|||||.||.|.+++.. ....+.+|++|+||.+.+|+++++|++||.+|.+|+|.+++.
T Consensus 197 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~ 276 (902)
T PRK10517 197 IPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVS 276 (902)
T ss_pred EeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhh
Confidence 99999999998899999999999999999987632 234577899999999999999999999999999999999998
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhccc
Q psy6866 348 RLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKN 427 (961)
Q Consensus 348 ~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ 427 (961)
....+++|+++.++++..++..++++++.+.++++.+.+.+|...+.+++++++++|||+||++++++++.++++|+|+|
T Consensus 277 ~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ 356 (902)
T PRK10517 277 EQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQK 356 (902)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCC
Confidence 88888999999999999998888887777777776666668889999999999999999999999999999999999999
Q ss_pred ccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCC
Q psy6866 428 CIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPN 507 (961)
Q Consensus 428 ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~ 507 (961)
++||+++++|+||++|+||||||||||+|+|+|.+++... + ...++++..+++|+...
T Consensus 357 ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------------~------~~~~~ll~~a~l~~~~~---- 414 (902)
T PRK10517 357 VIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------------G------KTSERVLHSAWLNSHYQ---- 414 (902)
T ss_pred cEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------------C------CCHHHHHHHHHhcCCcC----
Confidence 9999999999999999999999999999999998763100 0 01134666666654321
Q ss_pred CCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhh
Q psy6866 508 QDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCT 587 (961)
Q Consensus 508 ~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~ 587 (961)
...+||+|.|++.++.... .......++.+.++||+|.+|+|++++...++.+.+++|||||.|+++|+
T Consensus 415 ---------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~ 483 (902)
T PRK10517 415 ---------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS 483 (902)
T ss_pred ---------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhch
Confidence 1257999999999876432 12234567889999999999999998877667788999999999999999
Q ss_pred cccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCC
Q psy6866 588 TMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA 667 (961)
Q Consensus 588 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 667 (961)
+... +|...+++++.++++.+..+.++++|+||+++|++.++.++. ... ...|.|++|+|+++|+||+||+
T Consensus 484 ~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~----~~~----~~~e~~l~~lGli~~~Dp~R~~ 554 (902)
T PRK10517 484 QVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQ----RADESDLILEGYIAFLDPPKET 554 (902)
T ss_pred hhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc----ccc----cccccCceeeehHhhhCcchhh
Confidence 8765 667788998888889999999999999999999998754321 011 1136899999999999999999
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHH
Q psy6866 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKL 747 (961)
Q Consensus 668 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~ 747 (961)
++++|++|+++||+|+|+|||++.||.++|+++||.. ..+++|.++..++++++++.+++.. ||||++|+||.
T Consensus 555 a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-----~~v~~G~el~~l~~~el~~~~~~~~--VfAr~sPe~K~ 627 (902)
T PRK10517 555 TAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-----GEVLIGSDIETLSDDELANLAERTT--LFARLTPMHKE 627 (902)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-----cCceeHHHHHhCCHHHHHHHHhhCc--EEEEcCHHHHH
Confidence 9999999999999999999999999999999999953 3689999999999999999998876 99999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYI 827 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~ 827 (961)
++|+.||++|++|+|||||+||+|||++|||||||| +|+|+||++||+||++|||.+|+.++++||++|+||+|++.|.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ 706 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMT 706 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHH
Q psy6866 828 LASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGI 907 (961)
Q Consensus 828 l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~ 907 (961)
++.|+..++.++++.++..++|++|+|+||+|+++| +|+++|++|||++++|++|||+.. +.+...+...|+
T Consensus 707 ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~~~-------~~~~~~~~~~g~ 778 (902)
T PRK10517 707 ASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRWNP-------ADLGRFMVFFGP 778 (902)
T ss_pred HHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCCCH-------HHHHHHHHHHHH
Confidence 999999998888777665458999999999999999 799999999999999999998421 123333455677
Q ss_pred HHHHHHHHHHHHHHhh
Q psy6866 908 LETLAGFLTYFHVMYD 923 (961)
Q Consensus 908 ~~~~~~~~~~~~~~~~ 923 (961)
+.+++.+..|+++++.
T Consensus 779 ~~~~~~~~~~~~~~~~ 794 (902)
T PRK10517 779 ISSIFDILTFCLMWWV 794 (902)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777666655443
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-124 Score=1167.62 Aligned_cols=770 Identities=30% Similarity=0.460 Sum_probs=661.3
Q ss_pred CCCHHHHHHHhCCCCCCCCC--HHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccC
Q psy6866 117 LIPLEELYSILDTHPDRGLS--ELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETN 194 (961)
Q Consensus 117 ~~~~~~l~~~l~t~~~~GLs--~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~ 194 (961)
.++.+++++.|+|++++||| ++|+++|+++||+|++++++++++|+.++++|.+++.++|+++++++++.........
T Consensus 41 ~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~ 120 (941)
T TIGR01517 41 LGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEG 120 (941)
T ss_pred hCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccc
Confidence 57899999999999999999 9999999999999999999888999999999999999999999998876543211011
Q ss_pred CCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCeEEEEECCCcccceEEEecCCCeeec
Q psy6866 195 EEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKM-IPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPA 273 (961)
Q Consensus 195 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPa 273 (961)
.......|+.+++++++++++.++.+++++++++..+++++. .+.+++|+|||++++|+++||||||||.|++||+|||
T Consensus 121 ~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPa 200 (941)
T TIGR01517 121 KADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPA 200 (941)
T ss_pred cCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecc
Confidence 112223566777777777777888899999999988888764 4679999999999999999999999999999999999
Q ss_pred cEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCC
Q psy6866 274 DIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKT 353 (961)
Q Consensus 274 D~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~ 353 (961)
||+|++|+++.||||+|||||.|+.|.+++ .|++|+||.+.+|.+.++|++||.+|.+|+|.+++...+ ++
T Consensus 201 D~~li~g~~l~VdES~LTGES~pv~K~~~~--------~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~ 271 (941)
T TIGR01517 201 DGVFISGLSLEIDESSITGESDPIKKGAPK--------DSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-ED 271 (941)
T ss_pred cEEEEEcCcEEEEecccCCCCCcccccCCC--------CceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CC
Confidence 999999978999999999999999998764 378999999999999999999999999999999887754 56
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----h---------ccHHHHHHHHHHhhhhccCchhHHHHHHHHH
Q psy6866 354 TPIEQEVQHFMRLISMWALTLGAICFLLALY---I----G---------YNWLNACVYVIGIIVANVPEGLLATLTVSLT 417 (961)
Q Consensus 354 s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~---~----~---------~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~ 417 (961)
+|+++.++++...+..++++++++.++++.+ . + .+|...+.+++++++++|||+||++++++++
T Consensus 272 t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~ 351 (941)
T TIGR01517 272 TPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALA 351 (941)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH
Confidence 7999999999999888777666666655421 1 1 1466778889999999999999999999999
Q ss_pred HHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHH
Q psy6866 418 LTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAAC 497 (961)
Q Consensus 418 ~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 497 (961)
.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|++++..+..+..+... .. .......++..++
T Consensus 352 ~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~----~~--~~~~~~~~l~~~~ 425 (941)
T TIGR01517 352 YSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVL----RN--VPKHVRNILVEGI 425 (941)
T ss_pred HHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCccc----cc--CCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765444322110 00 1122344555555
Q ss_pred HccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeC
Q psy6866 498 LCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKG 577 (961)
Q Consensus 498 ~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KG 577 (961)
.||+........ .......|||+|.|+++++...+.+....+..++.++.+||+|++|+|++++..+++++++++||
T Consensus 426 ~~~s~~~~~~~~---~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KG 502 (941)
T TIGR01517 426 SLNSSSEEVVDR---GGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKG 502 (941)
T ss_pred HhCCCCccccCC---CCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEEC
Confidence 555443221110 01235679999999999988766566556667788899999999999999998777779999999
Q ss_pred ChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEee
Q psy6866 578 APEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGL 657 (961)
Q Consensus 578 a~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~ 657 (961)
|||.|+++|+.+...+|...++++ .++++.+.+++++++|+||+++|++.++.++++. .+..|+||+|+|+
T Consensus 503 A~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~--------~~~~e~~l~~lGl 573 (941)
T TIGR01517 503 ASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPR--------KDYPNGGLTLIGV 573 (941)
T ss_pred ChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCcccccc--------ccccccCcEEEEE
Confidence 999999999987655777777776 6788889999999999999999999886543221 1124789999999
Q ss_pred eeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceE
Q psy6866 658 ISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 658 i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
++|+||+|++++++|+.|+++||+++|+|||++.||.++|++|||..++ ..+++|.++..++++++++++.+.. |
T Consensus 574 i~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~---~~vi~G~~~~~l~~~el~~~i~~~~--V 648 (941)
T TIGR01517 574 VGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG---GLAMEGKEFRRLVYEEMDPILPKLR--V 648 (941)
T ss_pred eeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCC---ceEeeHHHhhhCCHHHHHHHhccCe--E
Confidence 9999999999999999999999999999999999999999999998653 4699999999999999999988764 9
Q ss_pred EeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHH
Q psy6866 738 FARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIF 817 (961)
Q Consensus 738 ~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~ 817 (961)
|||++|+||.++|+.||++|++|+|||||+||+|||++||||||||++|+|+|+++||+++++|+|++|+.++++||++|
T Consensus 649 far~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~ 728 (941)
T TIGR01517 649 LARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVY 728 (941)
T ss_pred EEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhh
Q psy6866 818 DNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKL 897 (961)
Q Consensus 818 ~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~ 897 (961)
+|++++++|.+++|+..++..+++.+++.++|++++|+||+|+++|.+|+++|++|+|++++|++||+++ +++++++.+
T Consensus 729 ~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~-~~~li~~~~ 807 (941)
T TIGR01517 729 DNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR-NAPLISRSM 807 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCC-CCCcCCHHH
Confidence 9999999999999999998888888888899999999999999999999999999999999999999864 688898887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 898 VTYAYFHLGILETLAGFLTYFHV 920 (961)
Q Consensus 898 ~~~~~~~~g~~~~~~~~~~~~~~ 920 (961)
+.. ++..|+++++++++.|++.
T Consensus 808 ~~~-i~~~~~~~~~~~~~~~~~~ 829 (941)
T TIGR01517 808 WKN-ILGQAGYQLVVTFILLFAG 829 (941)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHH
Confidence 765 4556888888888777654
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-123 Score=1151.88 Aligned_cols=760 Identities=32% Similarity=0.516 Sum_probs=667.5
Q ss_pred cccCCCHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCccCCccccchHHHHHHHH-HhhHHHHHHHHHHHHHHHhhhhc
Q psy6866 114 DEHLIPLEELYSILDTHPDRGLS-ELEVKRRLEKDGPNSLPQKYRINNVYVLVGYI-FRGFSALLWFGALLSFLAYLLEA 191 (961)
Q Consensus 114 ~~~~~~~~~l~~~l~t~~~~GLs-~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l-~~~~~~~l~~~ails~~~~~~~~ 191 (961)
+||..+.+++++.|+|++.+||| ++|+++|+++||+|++++++++++|+.+++++ .+++.++|+++++++++.
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~----- 77 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM----- 77 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH-----
Confidence 57888999999999999999999 89999999999999999988889999999999 799999999999888654
Q ss_pred ccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCee
Q psy6866 192 ETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKV 271 (961)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~I 271 (961)
..|..++++++++++++.++++||+++++.+++++++.+.+++|+|||++++|+++||||||||.|++||+|
T Consensus 78 --------g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~I 149 (884)
T TIGR01522 78 --------GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRV 149 (884)
T ss_pred --------cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEE
Confidence 124455666666677788999999999999999999999999999999999999999999999999999999
Q ss_pred eccEEEEeeCCceeeccCccccccceeccCCCCCC----ccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhc
Q psy6866 272 PADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNS----FAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTN 347 (961)
Q Consensus 272 PaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~----~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~ 347 (961)
||||+|++|+++.||||+|||||.|+.|.+++... ...+.+|++|+||.+.+|.++++|++||.+|.+|+|.++++
T Consensus 150 PaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~ 229 (884)
T TIGR01522 150 PADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQ 229 (884)
T ss_pred eeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhc
Confidence 99999999988999999999999999999875321 23456799999999999999999999999999999999998
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhccc
Q psy6866 348 RLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKN 427 (961)
Q Consensus 348 ~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ 427 (961)
.....++|+++.+++++.++++++++++++.+++.++.+.+|...+.+++++++++|||+||++++++++.+++||+++|
T Consensus 230 ~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ 309 (884)
T TIGR01522 230 AIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKR 309 (884)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcC
Confidence 88888999999999999998877665555555555556677889999999999999999999999999999999999999
Q ss_pred ccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeee-cCc-cccc------cccc--CCchHHHHHHHHHH
Q psy6866 428 CIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHV-KNG-VDVD------IQNF--ETNTTYKTLVRAAC 497 (961)
Q Consensus 428 ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~-~~~~------~~~~--~~~~~~~~l~~~~~ 497 (961)
+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+.. +.. .... .... ..+.....++.+++
T Consensus 310 ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 389 (884)
T TIGR01522 310 AIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGN 389 (884)
T ss_pred CcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999876543211 000 0000 0000 01234566888899
Q ss_pred HccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEc-CCCeEEEEEe
Q psy6866 498 LCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFS-PLNKYFLLMK 576 (961)
Q Consensus 498 ~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~-~~~~~~~~~K 576 (961)
+||++.....+. ...|||+|.|+++++...+. ...+..++.++++||+|.+|+|++++.. .++++++++|
T Consensus 390 l~~~~~~~~~~~-------~~~g~p~e~All~~~~~~~~--~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~K 460 (884)
T TIGR01522 390 LCNNAKFRNEAD-------TLLGNPTDVALIELLMKFGL--DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMK 460 (884)
T ss_pred hhCCCeecCCCC-------CcCCChHHHHHHHHHHHcCc--HhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEe
Confidence 999876543322 23589999999999875432 2344567889999999999999988765 3567899999
Q ss_pred CChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEe
Q psy6866 577 GAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIG 656 (961)
Q Consensus 577 Ga~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 656 (961)
||||.|+..|+.+...+|...+++++.++++.+.++.++.+|+|++++|++.+ +.+|+|+|
T Consensus 461 Gape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-------------------~~~l~~lG 521 (884)
T TIGR01522 461 GAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-------------------KGQLTFLG 521 (884)
T ss_pred CChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-------------------CCCeEEEE
Confidence 99999999999887766778888988889999999999999999999998754 25689999
Q ss_pred eeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 657 LISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 657 ~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
+++|+||+||+++++|+.|+++|++++|+|||+..||.++|+++||.... ..+++|.++..++++++++++.+..
T Consensus 522 li~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~---~~~v~g~~l~~~~~~~l~~~~~~~~-- 596 (884)
T TIGR01522 522 LVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT---SQSVSGEKLDAMDDQQLSQIVPKVA-- 596 (884)
T ss_pred EEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC---CceeEhHHhHhCCHHHHHHHhhcCe--
Confidence 99999999999999999999999999999999999999999999997653 3578999999999999999988764
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHH
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~ 816 (961)
||||++|+||.++|+.+|+.|++|+|||||.||+|||++||||||||.+|+++++++||+++++|||+.|+.++++||++
T Consensus 597 Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~ 676 (884)
T TIGR01522 597 VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGI 676 (884)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchh
Q psy6866 817 FDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRK 896 (961)
Q Consensus 817 ~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~ 896 (961)
|+|+++++.|.++.|+..++.++++.+++.++|++++|+||+|+++|.+|+++|++|||++++|+|||+++ +++++++.
T Consensus 677 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~-~~~~~~~~ 755 (884)
T TIGR01522 677 FNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPR-NDKILTKD 755 (884)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCC-CCCccCHH
Confidence 99999999999999999998888888999999999999999999999999999999999999999999865 78999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 897 LVTYAYFHLGILETLAGFLTYFHVM 921 (961)
Q Consensus 897 ~~~~~~~~~g~~~~~~~~~~~~~~~ 921 (961)
++..+ ...|++++++.++.|++.+
T Consensus 756 ~~~~~-~~~g~~~~~~~~~~~~~~~ 779 (884)
T TIGR01522 756 LIKKI-LVSAIIIVVGTLFVFVREM 779 (884)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 87764 4568888877777776654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-123 Score=1142.80 Aligned_cols=743 Identities=27% Similarity=0.422 Sum_probs=638.1
Q ss_pred cCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCC
Q psy6866 116 HLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNE 195 (961)
Q Consensus 116 ~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~ 195 (961)
|..+.+++++.|++++ +|||++|+++|+++||+|+++.+++.++|+.|+++|.+++.++|+++++++++...+.....
T Consensus 28 ~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~- 105 (903)
T PRK15122 28 AANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR- 105 (903)
T ss_pred HhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC-
Confidence 4578899999999995 89999999999999999999998888999999999999999999999999887532211100
Q ss_pred CCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECC------eEEEEECCCcccceEEEecCCC
Q psy6866 196 EKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNG------SVKEIDSAGLVRGDIVLLKIGD 269 (961)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G------~~~~I~~~eLv~GDIV~l~~Gd 269 (961)
+....|..+++++++++++++++++||+++++..++|+++.+.+++|+||| ++++|+++||||||+|.|++||
T Consensus 106 -~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 106 -GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred -CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 111245667788888889999999999999999999999999999999994 7999999999999999999999
Q ss_pred eeeccEEEEeeCCceeeccCccccccceeccCCC-------------CCCccccCcceEeeeeeeeeeceEEEEEEcCCc
Q psy6866 270 KVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGA-------------TNSFAVESRNLVFFSTNLVSGSGKGVVILTGSN 336 (961)
Q Consensus 270 ~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~-------------~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~ 336 (961)
+|||||+|++|+++.||||+|||||.||.|.+.. ......+.+|++|+||.+.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 9999999999998999999999999999998620 111233567999999999999999999999999
Q ss_pred ChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHH
Q psy6866 337 TVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSL 416 (961)
Q Consensus 337 T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l 416 (961)
|.+|+|.+++.. ...++|+++.++++...+..+++.++.+.+++..+.+.+|...+.+++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 999999998877 5667899999999998887777666666665555556688899999999999999999999999999
Q ss_pred HHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHH
Q psy6866 417 TLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAA 496 (961)
Q Consensus 417 ~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 496 (961)
+.++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. ..+.++..+
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~------------------~~~~~l~~a 405 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR------------------KDERVLQLA 405 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC------------------ChHHHHHHH
Confidence 99999999999999999999999999999999999999999999987632110 012355555
Q ss_pred HHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEe
Q psy6866 497 CLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMK 576 (961)
Q Consensus 497 ~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~K 576 (961)
++|+.. ....++|+|.|+++++...+.. ..+..++.+.++||+|.+|+|++++...++++++++|
T Consensus 406 ~l~s~~-------------~~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~K 470 (903)
T PRK15122 406 WLNSFH-------------QSGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICK 470 (903)
T ss_pred HHhCCC-------------CCCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEEC
Confidence 554211 0125799999999998764321 2334678899999999999999998776678899999
Q ss_pred CChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEe
Q psy6866 577 GAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIG 656 (961)
Q Consensus 577 Ga~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 656 (961)
||||.|+++|++... +|...+++++.++++.+..+.++.+|+|++++|++.++.++... ...+..|+|++|+|
T Consensus 471 Ga~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~------~~~~~~e~~l~~lG 543 (903)
T PRK15122 471 GAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA------QYSTADERDLVIRG 543 (903)
T ss_pred CcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc------ccccccccCcEEEE
Confidence 999999999997654 67777889888999999999999999999999999876432110 01112478999999
Q ss_pred eeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 657 LISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 657 ~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
+++|+||+||+++++|++|+++||+|+|+|||++.||.++|+++||.. ..+++|.++..++++++.+.+++..
T Consensus 544 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-----~~vi~G~el~~~~~~el~~~v~~~~-- 616 (903)
T PRK15122 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-----GEPLLGTEIEAMDDAALAREVEERT-- 616 (903)
T ss_pred EEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-----CCccchHhhhhCCHHHHHHHhhhCC--
Confidence 999999999999999999999999999999999999999999999953 3589999999999999999998876
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHH
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~ 816 (961)
||||++|+||.++|+.||++|++|+|||||+||+|||++|||||||| +|+|+||++||+||++|||++|+.++++||++
T Consensus 617 VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i 695 (903)
T PRK15122 617 VFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRET 695 (903)
T ss_pred EEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchh
Q psy6866 817 FDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRK 896 (961)
Q Consensus 817 ~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~ 896 (961)
|+||+|++.|.++.|+..++.+++..+++.++|++|+|+||+|+++|. |+++|++|||++++| |||+++ +.+++++.
T Consensus 696 ~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~-~~~~~~~~ 772 (903)
T PRK15122 696 FGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKW-DAKNIGRF 772 (903)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCC-ChhhhHHH
Confidence 999999999999999999888777777766689999999999999995 999999999999999 999875 56777764
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q psy6866 897 LVTYAYFHLGILETLAGFLTYF 918 (961)
Q Consensus 897 ~~~~~~~~~g~~~~~~~~~~~~ 918 (961)
++. +|.+.+++++..|+
T Consensus 773 ~~~-----~g~~~~~~~~~~~~ 789 (903)
T PRK15122 773 MLW-----IGPTSSIFDITTFA 789 (903)
T ss_pred HHH-----HHHHHHHHHHHHHH
Confidence 432 35554444444443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-122 Score=1138.40 Aligned_cols=732 Identities=28% Similarity=0.446 Sum_probs=639.5
Q ss_pred cCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCC
Q psy6866 116 HLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNE 195 (961)
Q Consensus 116 ~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~ 195 (961)
|..+.+++.+.|+++. +|||++|+++|+++||+|.++.+++.++|+.++++|++++.++|+++++++++.
T Consensus 16 ~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~--------- 85 (867)
T TIGR01524 16 SQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT--------- 85 (867)
T ss_pred HhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH---------
Confidence 4678899999999986 799999999999999999999988888999999999999999999999888654
Q ss_pred CCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEE------CCeEEEEECCCcccceEEEecCCC
Q psy6866 196 EKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIR------NGSVKEIDSAGLVRGDIVLLKIGD 269 (961)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R------~G~~~~I~~~eLv~GDIV~l~~Gd 269 (961)
+.++.+++++++++++++++++||+++++..++++++.+.+++|+| ||++++|+++||||||||.|++||
T Consensus 86 ----~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd 161 (867)
T TIGR01524 86 ----DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD 161 (867)
T ss_pred ----hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC
Confidence 2456677888888899999999999999999999999999999999 999999999999999999999999
Q ss_pred eeeccEEEEeeCCceeeccCccccccceeccCCCC---CCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhh
Q psy6866 270 KVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGAT---NSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLT 346 (961)
Q Consensus 270 ~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~ 346 (961)
+|||||+|++|+++.||||+|||||.|+.|.+++. .....+.+|++|+||.+.+|.++++|++||.+|.+|+|.+++
T Consensus 162 ~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v 241 (867)
T TIGR01524 162 IIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA 241 (867)
T ss_pred EEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHh
Confidence 99999999999889999999999999999998763 223446789999999999999999999999999999999998
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcc
Q psy6866 347 NRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASK 426 (961)
Q Consensus 347 ~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~ 426 (961)
.. ...++|+++.++++..++..++++++++.++++.+.+.+|...+.+++++++++|||+||++++++++.++++|+|+
T Consensus 242 ~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~ 320 (867)
T TIGR01524 242 TE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKK 320 (867)
T ss_pred hC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhC
Confidence 87 66789999999999999988888877777777665566788899999999999999999999999999999999999
Q ss_pred cccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecC
Q psy6866 427 NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEP 506 (961)
Q Consensus 427 ~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~ 506 (961)
|++||+++++|+||++|+||||||||||+|+|+|.+++.... ...+.++..+++|+...
T Consensus 321 ~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~------------------~~~~~~l~~a~l~~~~~--- 379 (867)
T TIGR01524 321 KVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG------------------ETSERVLKMAWLNSYFQ--- 379 (867)
T ss_pred CcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC------------------CCHHHHHHHHHHhCCCC---
Confidence 999999999999999999999999999999999988742110 01133555565553221
Q ss_pred CCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHh
Q psy6866 507 NQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERC 586 (961)
Q Consensus 507 ~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c 586 (961)
...++|+|.|++.++... .....+..++.+.++||+|.+|+|++++...++.+++++|||||.|+++|
T Consensus 380 ----------~~~~~p~~~Al~~~~~~~--~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c 447 (867)
T TIGR01524 380 ----------TGWKNVLDHAVLAKLDES--AARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVC 447 (867)
T ss_pred ----------CCCCChHHHHHHHHHHhh--chhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhc
Confidence 124689999999987642 12233456788999999999999999887666668899999999999999
Q ss_pred hcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCC
Q psy6866 587 TTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRP 666 (961)
Q Consensus 587 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~ 666 (961)
+++.. +|...+++++.++++.+.++.++.+|+|++++|+++++.++. ... +..|+||+|+|+++|+||+|+
T Consensus 448 ~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~----~~~----~~~e~~l~~lGli~l~Dp~R~ 518 (867)
T TIGR01524 448 THKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEA----DFT----KTDEEQLIIEGFLGFLDPPKE 518 (867)
T ss_pred hhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccc----ccc----ccccCCcEEEEEEEeeCCCch
Confidence 97755 677778888888889999999999999999999998765321 011 113689999999999999999
Q ss_pred ChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHH
Q psy6866 667 AVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQK 746 (961)
Q Consensus 667 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K 746 (961)
+++++|++|+++||+++|+|||+..||.++|+++||.. ..+++|.++..++++++.+.+++.. +|||++|+||
T Consensus 519 ~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-----~~v~~g~~l~~~~~~el~~~~~~~~--vfAr~~Pe~K 591 (867)
T TIGR01524 519 STKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-----NDFLLGADIEELSDEELARELRKYH--IFARLTPMQK 591 (867)
T ss_pred hHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-----CCeeecHhhhhCCHHHHHHHhhhCe--EEEECCHHHH
Confidence 99999999999999999999999999999999999964 3589999999999999999998875 9999999999
Q ss_pred HHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 747 LRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAY 826 (961)
Q Consensus 747 ~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~ 826 (961)
.++|+.+|++|++|+|||||.||+|||++|||||||| +|+|+||++||+||++|||++|+.++++||++|+||+|++.|
T Consensus 592 ~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~ 670 (867)
T TIGR01524 592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKM 670 (867)
T ss_pred HHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHH
Q psy6866 827 ILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLG 906 (961)
Q Consensus 827 ~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g 906 (961)
.++.|+..++.++++.++..++|++|+|+||+|+++| +|+++|++|||++++|++||++ +.+ .+...++.+|
T Consensus 671 ~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~~--~~~-----~~~~~~~~~g 742 (867)
T TIGR01524 671 TASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQW--EQK-----GMGRFMLCIG 742 (867)
T ss_pred HHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCCC--Chh-----hHHHHHHHHH
Confidence 9999999998888777776668999999999999999 7999999999999999877763 232 2222344467
Q ss_pred HHHHHHHHHHHHHH
Q psy6866 907 ILETLAGFLTYFHV 920 (961)
Q Consensus 907 ~~~~~~~~~~~~~~ 920 (961)
++.+++.+.+|++.
T Consensus 743 ~~~~~~~~~~~~~~ 756 (867)
T TIGR01524 743 PVSSIFDIATFLLM 756 (867)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666666555443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-116 Score=1094.52 Aligned_cols=749 Identities=33% Similarity=0.504 Sum_probs=632.5
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEE
Q psy6866 165 VGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVI 244 (961)
Q Consensus 165 ~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~ 244 (961)
+++|.+++.++|+++++++++...... +......|+.+++++++++++++++++|++++++.+++++++.+.+++|+
T Consensus 2 ~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~Vi 78 (917)
T TIGR01116 2 LEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL 78 (917)
T ss_pred hHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 578889999999999999987643321 11112456778888889999999999999999999999999999999999
Q ss_pred ECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCC---CccccCcceEeeeeee
Q psy6866 245 RNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATN---SFAVESRNLVFFSTNL 321 (961)
Q Consensus 245 R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~---~~~~~~~n~l~~Gt~v 321 (961)
|||++++|+++||||||||.|++||+|||||+|++|+++.||||+|||||.|+.|.++... ..+.+.+|++|+||.+
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 9999999999999999999999999999999999998899999999999999999876332 1234567999999999
Q ss_pred eeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccH----HH
Q psy6866 322 VSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYI------GYNW----LN 391 (961)
Q Consensus 322 ~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~------~~~~----~~ 391 (961)
.+|++.++|++||.+|.+|+|.+++...+.+++|+++.+++++..++.++++++++.++++... +.+| ..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 9999999999999999999999998888888999999999999988887777766666554321 1223 23
Q ss_pred HHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceee-
Q psy6866 392 ACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIY- 470 (961)
Q Consensus 392 ~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~- 470 (961)
.+..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 4446678999999999999999999999999999999999999999999999999999999999999999998765321
Q ss_pred -----eecCc-cccccccc--------CCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhccccc
Q psy6866 471 -----HVKNG-VDVDIQNF--------ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIK 536 (961)
Q Consensus 471 -----~~~~~-~~~~~~~~--------~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~ 536 (961)
..... ........ ........++.++++||++.+..++... .....|||+|.|+++++.+.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~---~~~~~gdp~E~ALl~~~~~~g~ 395 (917)
T TIGR01116 319 SLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKG---VYEKVGEATEAALKVLVEKMGL 395 (917)
T ss_pred ccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCC---ceeeccChhHHHHHHHHHHcCC
Confidence 11110 00000000 0123356688899999988764332211 1234699999999999876543
Q ss_pred chh----------------hHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccC
Q psy6866 537 SIQ----------------DVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLT 600 (961)
Q Consensus 537 ~~~----------------~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~ 600 (961)
+.. ..++.++.++++||+|+||+|+++++.. +++++|+|||||.|+++|+++...+|...+++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~ 474 (917)
T TIGR01116 396 PATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLT 474 (917)
T ss_pred CchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCeeeCC
Confidence 322 2345678999999999999999998753 66899999999999999998877668888999
Q ss_pred HHHHHHHHHHHHHHHH-hcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC
Q psy6866 601 AEKKYELEDKIKLFAS-KGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG 679 (961)
Q Consensus 601 ~~~~~~~~~~~~~~a~-~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag 679 (961)
++.++++.+.+++|++ +|+||+++|||.++.+.... ...+....+.+|+||+|+|+++++||+|++++++|+.|+++|
T Consensus 475 ~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aG 553 (917)
T TIGR01116 475 DKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREED-LLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAG 553 (917)
T ss_pred HHHHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-ccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCC
Confidence 9999999999999999 99999999999986532110 001112224568999999999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCC-CceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCC
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSS-DDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDE 758 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~ 758 (961)
|+++|+|||+..||.++|+++|+..++.. ....++|.++..+++++......+. .||||++|+||.++|+.+|+.|+
T Consensus 554 I~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~--~v~ar~~P~~K~~iV~~lq~~g~ 631 (917)
T TIGR01116 554 IRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSA--VLFSRVEPSHKSELVELLQEQGE 631 (917)
T ss_pred CEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcC--eEEEecCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999865432 2357899999999988887776654 59999999999999999999999
Q ss_pred EEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 759 IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 759 ~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
+|+|+|||.||+|||++|||||||| +|++.++++||+++.+|||..|++++++||++|+|++++++|.++.|+..+++.
T Consensus 632 ~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~ 710 (917)
T TIGR01116 632 IVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCI 710 (917)
T ss_pred eEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy6866 839 LFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYF 918 (961)
Q Consensus 839 ~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 918 (961)
+++.+++.+.|++++|++|+|+++|.+|+++|++++|++++|++||+++ ++++++++++.. ++..|+++++++++.|+
T Consensus 711 ~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~-~~~l~~~~~~~~-~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 711 FLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRP-DEPLITGWLFFR-YLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCC-CCCcccHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9998999999999999999999999999999999999999999999865 689999988765 55579999999888887
Q ss_pred HHHhhcCC
Q psy6866 919 HVMYDAGW 926 (961)
Q Consensus 919 ~~~~~~~~ 926 (961)
+.+...|+
T Consensus 789 ~~~~~~~~ 796 (917)
T TIGR01116 789 WWYLLTHF 796 (917)
T ss_pred HHHhhcCc
Confidence 76554344
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-114 Score=1053.61 Aligned_cols=685 Identities=30% Similarity=0.487 Sum_probs=594.9
Q ss_pred CCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHh
Q psy6866 134 GLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCI 213 (961)
Q Consensus 134 GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 213 (961)
|||++|+++|+++||+|+++++ +++.|+.|+++|++++.++|+++++++++. ..|..+++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------------~~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------------ENWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------cchhhhhhhhhhhH
Confidence 8999999999999999999884 457789999999999999999999888654 23455677778888
Q ss_pred hHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCcccc
Q psy6866 214 VTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGE 293 (961)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGE 293 (961)
+++.++++||+++++..++++++.+++++|+|||++++|+++||||||||.|++||+|||||+|++|+++.||||+||||
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGE 146 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGE 146 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred ccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHH
Q psy6866 294 VEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALT 373 (961)
Q Consensus 294 s~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~ 373 (961)
|.||.|.+++ .+|+||.+.+|+++++|++||.+|.+|+|.++++..+..++|+|+.+++++.++++++++
T Consensus 147 S~PV~K~~~~----------~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~ 216 (755)
T TIGR01647 147 SLPVTKKTGD----------IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGV 216 (755)
T ss_pred ccceEeccCC----------eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999998774 499999999999999999999999999999999888888899999999999999888888
Q ss_pred HHHHHHHHHHH-hhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCc
Q psy6866 374 LGAICFLLALY-IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGT 452 (961)
Q Consensus 374 ~~~i~~i~~~~-~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGT 452 (961)
++++.+++++. .+.+|...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||
T Consensus 217 ~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGT 296 (755)
T TIGR01647 217 LVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGT 296 (755)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCc
Confidence 88777777766 56788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhc
Q psy6866 453 LTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQ 532 (961)
Q Consensus 453 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~ 532 (961)
||+|+|+|.+++..+.. + ..++++..+++|+. ...++|.|.|+++++.
T Consensus 297 LT~~~~~v~~~~~~~~~-------------~----~~~~~l~~a~~~~~---------------~~~~~pi~~Ai~~~~~ 344 (755)
T TIGR01647 297 LTLNKLSIDEILPFFNG-------------F----DKDDVLLYAALASR---------------EEDQDAIDTAVLGSAK 344 (755)
T ss_pred cccCceEEEEEEecCCC-------------C----CHHHHHHHHHHhCC---------------CCCCChHHHHHHHHHH
Confidence 99999999998754210 0 11236666776642 1246899999999876
Q ss_pred ccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCC-CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHH
Q psy6866 533 PRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPL-NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKI 611 (961)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~-~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 611 (961)
..+ ..+..++.+..+||++.+|+|++++..++ +++++++||+||.|++.|+.. .+.++++.+.+
T Consensus 345 ~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~ 409 (755)
T TIGR01647 345 DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKV 409 (755)
T ss_pred HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHH
Confidence 421 23455778899999999999988877653 677889999999999999731 23456677888
Q ss_pred HHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHH
Q psy6866 612 KLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPC 691 (961)
Q Consensus 612 ~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ 691 (961)
++++.+|+|++++|++. .|.+|+|+|+++|+||+||+++++|++|+++||+++|+|||++.
T Consensus 410 ~~~~~~G~rvl~vA~~~-------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 470 (755)
T TIGR01647 410 DELASRGYRALGVARTD-------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLA 470 (755)
T ss_pred HHHHhCCCEEEEEEEEc-------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 99999999999999862 14678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHh
Q psy6866 692 TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAP 771 (961)
Q Consensus 692 ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~ 771 (961)
||.++|+++||.........+.+|.+...++++++++++++.. +|||++|+||.++|+.+|++|++|+|||||.||+|
T Consensus 471 tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDap 548 (755)
T TIGR01647 471 IAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDAD--GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAP 548 (755)
T ss_pred HHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCC--EEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHH
Confidence 9999999999965322223345566666788999999998876 99999999999999999999999999999999999
Q ss_pred hhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhH
Q psy6866 772 ALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVS 851 (961)
Q Consensus 772 al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~ 851 (961)
||++|||||||| +|+|+||++||+||++|||.+|+.++++||++|+|++|++.|.++.|+..++.+++..++ .+.|++
T Consensus 549 AL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~ 626 (755)
T TIGR01647 549 ALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFP 626 (755)
T ss_pred HHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchh
Confidence 999999999999 899999999999999999999999999999999999999999999999988766655432 335699
Q ss_pred HHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 852 TVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMY 922 (961)
Q Consensus 852 ~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 922 (961)
|+|+||+|+++|. |++++++|++++. |+|+. .. + ++++.. ....|++.++.+|+.|++.+.
T Consensus 627 ~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~---~~-~-~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 687 (755)
T TIGR01647 627 PIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQR---WN-L-REVFTM-STVLGIYLVISTFLLLAIALD 687 (755)
T ss_pred HHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCc---cc-h-HHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999996 7999999998753 44432 22 2 344444 345799999988888887764
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-114 Score=1089.99 Aligned_cols=780 Identities=22% Similarity=0.275 Sum_probs=629.0
Q ss_pred cccHHHHHHHhhhhcccc-HHHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchH
Q psy6866 83 DCSKKSILRFIHKEKEMD-VAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNV 161 (961)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~ 161 (961)
+++.++..+|+|.+.+.. +..+....+. .+........ ....|||.+|+++|++.||+|.++.+. +++|
T Consensus 96 ~~f~~~~~~y~~~~~~~~~f~~~~~~~~~-------~~~~~~~~~~--~~~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~ 165 (1054)
T TIGR01657 96 IYFDFRKQRFSYHEKELKIFSPLPYLFKE-------KSFGVYSTCA--GHSNGLTTGDIAQRKAKYGKNEIEIPV-PSFL 165 (1054)
T ss_pred EEEEEEEEEEEEECCCCceEEeccccccc-------ccchhhhhhh--hhccCCCHHHHHHHHHhcCCCeeecCC-CCHH
Confidence 345566778888776653 4444332111 0000111111 124799999999999999999999865 7999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCee
Q psy6866 162 YVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRA 241 (961)
Q Consensus 162 ~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 241 (961)
+.++++++++|.++++++.+++++. ++|+++++++++++++.+..+++++++.+.++++.. .+..+
T Consensus 166 ~ll~~~~~~p~~i~~i~~~~l~~~~-------------~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v 231 (1054)
T TIGR01657 166 ELLKEEVLHPFYVFQVFSVILWLLD-------------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSV 231 (1054)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhh-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeE
Confidence 9999999999998888876555431 457788888888888999999999998888777654 36789
Q ss_pred EEEECCeEEEEECCCcccceEEEec--CCCeeeccEEEEeeCCceeeccCccccccceeccCCCC---CC-----ccccC
Q psy6866 242 TVIRNGSVKEIDSAGLVRGDIVLLK--IGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGAT---NS-----FAVES 311 (961)
Q Consensus 242 ~V~R~G~~~~I~~~eLv~GDIV~l~--~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~---~~-----~~~~~ 311 (961)
+|+|||++++|+++||||||||.|+ +|++|||||+|++|+ +.||||+|||||.|+.|.+... .. ...++
T Consensus 232 ~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~ 310 (1054)
T TIGR01657 232 IVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSK 310 (1054)
T ss_pred EEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccceecccCCcccccccccccccccc
Confidence 9999999999999999999999999 999999999999985 7999999999999999987532 11 12356
Q ss_pred cceEeeeeeeee-------eceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 312 RNLVFFSTNLVS-------GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALY 384 (961)
Q Consensus 312 ~n~l~~Gt~v~~-------G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~ 384 (961)
+|++|+||.+++ |.+.++|++||.+|..|++.+.+....+..+++++.+.++...++.++++.+++.++....
T Consensus 311 ~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~~ 390 (1054)
T TIGR01657 311 KHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIK 390 (1054)
T ss_pred ceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999995 7899999999999999999998888888889999999999888777666544444444444
Q ss_pred hhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEE
Q psy6866 385 IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLS 464 (961)
Q Consensus 385 ~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~ 464 (961)
.+.+|...+..++++++++|||+||++++++++++++||+|+|++||++.++|++|++|++|||||||||+|+|+|.+++
T Consensus 391 ~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~ 470 (1054)
T TIGR01657 391 DGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQ 470 (1054)
T ss_pred cCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEe
Confidence 56688899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhh----
Q psy6866 465 FNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQD---- 540 (961)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~---- 540 (961)
..+........ .. . ........+..++++||++....+ ...|||+|.|+++++.........
T Consensus 471 ~~~~~~~~~~~--~~--~-~~~~~~~~~~~~~a~C~~~~~~~~---------~~~Gdp~E~al~~~~~~~~~~~~~~~~~ 536 (1054)
T TIGR01657 471 GLSGNQEFLKI--VT--E-DSSLKPSITHKALATCHSLTKLEG---------KLVGDPLDKKMFEATGWTLEEDDESAEP 536 (1054)
T ss_pred cccCccccccc--cc--c-ccccCchHHHHHHHhCCeeEEECC---------EEecCHHHHHHHHhCCCEEECCCCcccc
Confidence 64321100000 00 0 000122346678899998754321 357999999999987533211000
Q ss_pred H-----------hhcCCeEEEecCCCCCeeEEEEEEcCC-CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHH
Q psy6866 541 V-----------RNTFPKVTEVPFNSLNKFHLTVHFSPL-NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELE 608 (961)
Q Consensus 541 ~-----------~~~~~~~~~~~F~s~~k~~~~v~~~~~-~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~ 608 (961)
. ...+++++++||+|++|||+++++..+ +++++++|||||.|+++|++. ..++++.
T Consensus 537 ~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~ 604 (1054)
T TIGR01657 537 TSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQ 604 (1054)
T ss_pred cccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHH
Confidence 0 135677899999999999999988744 568899999999999999841 1245677
Q ss_pred HHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCC
Q psy6866 609 DKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGD 688 (961)
Q Consensus 609 ~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD 688 (961)
+.++.|+.+|+||+|+|||+++...+.... ...++.+|+||+|+|+++|+||+||+++++|+.|+++||+++|+|||
T Consensus 605 ~~~~~~a~~G~RVLalA~k~l~~~~~~~~~---~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD 681 (1054)
T TIGR01657 605 EVLKSYTREGYRVLALAYKELPKLTLQKAQ---DLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGD 681 (1054)
T ss_pred HHHHHHHhcCCEEEEEEEeecCccchhhhh---hccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCC
Confidence 889999999999999999998743221111 11234578999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCC--------------------------------------------------CceeEechhh
Q psy6866 689 HPCTAKAIAIKCHILSETSS--------------------------------------------------DDNVFTGTDL 718 (961)
Q Consensus 689 ~~~ta~~ia~~~gi~~~~~~--------------------------------------------------~~~v~~g~~~ 718 (961)
++.||.++|++|||+.+... ...+++|+++
T Consensus 682 ~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l 761 (1054)
T TIGR01657 682 NPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAF 761 (1054)
T ss_pred CHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHH
Confidence 99999999999999764310 0257888887
Q ss_pred cc---CCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc
Q psy6866 719 RK---ITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD 795 (961)
Q Consensus 719 ~~---~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad 795 (961)
.. +.++++.+++.+.. ||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||| . +|+ ..+||
T Consensus 762 ~~l~~~~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~ 836 (1054)
T TIGR01657 762 AVLQAHSPELLLRLLSHTT--VFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAP 836 (1054)
T ss_pred HHHHHhhHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecc
Confidence 65 45567888888765 99999999999999999999999999999999999999999999998 3 344 48999
Q ss_pred eEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCC
Q psy6866 796 MILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKP 875 (961)
Q Consensus 796 ~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~ 875 (961)
+++.+++|++|+.+|++||+++.|+++.++|.+.+++...+..+...+ .+.|++++|+||+|++++++++++|++++|
T Consensus 837 f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p 914 (1054)
T TIGR01657 837 FTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYL--IGSNLGDGQFLTIDLLLIFPVALLMSRNKP 914 (1054)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccCcCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999999888665443333 458899999999999999999999999999
Q ss_pred CCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy6866 876 ESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDP 928 (961)
Q Consensus 876 ~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 928 (961)
++++|++||. ++++++.++...++ .++++.++.+..|++.....|+.+
T Consensus 915 ~~~l~~~~P~----~~l~~~~~~~si~~-q~~i~~~~~~~~~~~~~~~~~~~~ 962 (1054)
T TIGR01657 915 LKKLSKERPP----SNLFSVYILTSVLI-QFVLHILSQVYLVFELHAQPWYKP 962 (1054)
T ss_pred hhhcCCCCCC----ccccCHHHHHHHHH-HHHHHHHHHHHHHHHHhhCCCccC
Confidence 9999999984 57899888766444 588888888888888766656543
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-101 Score=976.20 Aligned_cols=746 Identities=21% Similarity=0.252 Sum_probs=592.1
Q ss_pred cCCCccCCccccch---HHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHH
Q psy6866 147 DGPNSLPQKYRINN---VYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223 (961)
Q Consensus 147 ~G~N~i~~~~~~~~---~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 223 (961)
|.+|.+...+...+ ++.+++||.++++++++++++++++... .. .+.+...++++++++++++.+++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~---s~-----~~~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPIL---SP-----TYRGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCc---CC-----CCccHhHHhHHHHHHHHHHHHHHHH
Confidence 56799887653332 3566777777888888888877765311 11 1223445667777778888999999
Q ss_pred HHHHHHHHHHhccCCCeeEEEEC-CeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeeccCcccccccee
Q psy6866 224 RKSSHITESFAKMIPTRATVIRN-GSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAENSSLTGEVEPVT 298 (961)
Q Consensus 224 ~~~~~~~~~l~~l~~~~~~V~R~-G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vdeS~LTGEs~pv~ 298 (961)
++++++.++++ .+.++|+|+ |++++++++||+|||||.|++||+||||++|+++++ +.||||+|||||.|+.
T Consensus 73 ~~r~~~d~~~n---~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~ 149 (1057)
T TIGR01652 73 IRRRRRDKEVN---NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKL 149 (1057)
T ss_pred HHHHHhHHHHh---CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceE
Confidence 98888776654 468999997 899999999999999999999999999999999765 8999999999999999
Q ss_pred ccCCCC--------------------------------------CCccccCcceEeeeeeeee-eceEEEEEEcCCcChh
Q psy6866 299 CTLGAT--------------------------------------NSFAVESRNLVFFSTNLVS-GSGKGVVILTGSNTVM 339 (961)
Q Consensus 299 k~~~~~--------------------------------------~~~~~~~~n~l~~Gt~v~~-G~~~~vV~~tG~~T~~ 339 (961)
|.+... ...+++.+|++++||.+.+ |++.|+|++||.+|.+
T Consensus 150 k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~ 229 (1057)
T TIGR01652 150 RQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL 229 (1057)
T ss_pred eecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh
Confidence 975311 1124566799999999999 9999999999999965
Q ss_pred hhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cH---------------HHHHHHHHHh
Q psy6866 340 GKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGY-----NW---------------LNACVYVIGI 399 (961)
Q Consensus 340 g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~-----~~---------------~~~~~~~i~v 399 (961)
++ +....+.+++++++.++++..+++.++++++++.+++..++.. .| ...+..++.+
T Consensus 230 ~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L 306 (1057)
T TIGR01652 230 MR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLIL 306 (1057)
T ss_pred hh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHH
Confidence 54 4556677899999999999999888888777777766433211 22 1255667788
Q ss_pred hhhccCchhHHHHHHHHHHHH------HHhhcc----cccccccchhhhccceeEEEecCcCccccCceEEEEEEEccee
Q psy6866 400 IVANVPEGLLATLTVSLTLTA------KRLASK----NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREI 469 (961)
Q Consensus 400 lv~~vP~~L~~a~~~~l~~~~------~~l~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 469 (961)
+..++|++|+++++++++.++ .+|.++ +++||+.+++|+||++++||+|||||||+|+|+++++++++..
T Consensus 307 ~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~ 386 (1057)
T TIGR01652 307 FSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVS 386 (1057)
T ss_pred HhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEE
Confidence 889999999999999999999 788764 4999999999999999999999999999999999999999887
Q ss_pred eeecCcc---------c----------ccc--ccc-------------CCchHHHHHHHHHHHccCceecCCCCCccccc
Q psy6866 470 YHVKNGV---------D----------VDI--QNF-------------ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRE 515 (961)
Q Consensus 470 ~~~~~~~---------~----------~~~--~~~-------------~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~ 515 (961)
|...... . ... ..+ +......+++.++++||++....+++. +...
T Consensus 387 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~-~~~~ 465 (1057)
T TIGR01652 387 YGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDG-PEEI 465 (1057)
T ss_pred ecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCC-CCce
Confidence 7532110 0 000 000 011234678889999999876532211 0011
Q ss_pred ccccCChhHHHHHHhhcccccchh--------------hHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHH
Q psy6866 516 RKASGDATEVGILHFIQPRIKSIQ--------------DVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEV 581 (961)
Q Consensus 516 ~~~~g~~~e~all~~~~~~~~~~~--------------~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~ 581 (961)
.+..+||+|.|+++++...+.... +....+++++++||+|+||||+++++.+++++++|+|||||.
T Consensus 466 ~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~ 545 (1057)
T TIGR01652 466 TYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTV 545 (1057)
T ss_pred EEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHH
Confidence 244689999999999876543211 122457888999999999999999998888899999999999
Q ss_pred HHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCcc-C-------C-C-----CCCCC
Q psy6866 582 IMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK-F-------S-T-----DPMNF 647 (961)
Q Consensus 582 Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~-~-------~-~-----~~~~~ 647 (961)
|+++|+.. +++.++.+.+.+++|+.+|+||+++|+|.++++++.++.+ + . + +..+.
T Consensus 546 il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~ 615 (1057)
T TIGR01652 546 IFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAES 615 (1057)
T ss_pred HHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999741 1234667888999999999999999999998654432110 0 0 0 01124
Q ss_pred CCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------
Q psy6866 648 PSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS------------------- 708 (961)
Q Consensus 648 ~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~------------------- 708 (961)
+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+.+||.++|++||+++++..
T Consensus 616 iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i 695 (1057)
T TIGR01652 616 IEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAI 695 (1057)
T ss_pred HHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999875431
Q ss_pred -------------------CceeEechhhccCCHH----HHHHHHHhcCceEEeecCHHHHHHHHHHHhhc-CCEEEEEc
Q psy6866 709 -------------------DDNVFTGTDLRKITDE----ELKDILETNKELVFARTSPLQKLRIVELYQSL-DEIVAVTG 764 (961)
Q Consensus 709 -------------------~~~v~~g~~~~~~~~~----~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~-g~~V~~vG 764 (961)
..++++|+++..+.++ ++.+++..++.+||||++|+||.++|+.+|+. |++|+|||
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iG 775 (1057)
T TIGR01652 696 KFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIG 775 (1057)
T ss_pred HHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 1258888888755433 46667777888899999999999999999998 99999999
Q ss_pred CCCCCHhhhhhCCeeEeecCCccH--hhhhccceEeecCCchHHHHHH-HHHHHHHHHHHHHHHHHHhhhHhhHHHHHHH
Q psy6866 765 DGVNDAPALKKADIGIAMGITGSE--VSKQTADMILMDDNFASIVLGI-EEGRLIFDNLKKSIAYILASNIPEILPFLFY 841 (961)
Q Consensus 765 DG~ND~~al~~AdvGIamg~~g~~--~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~ 841 (961)
||+||+|||++|||||++ .|+| .|+.+||+++.+ |..+.+++ .|||++|+|+++++.|.++.|++.+++.+++
T Consensus 776 DG~ND~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~ 851 (1057)
T TIGR01652 776 DGANDVSMIQEADVGVGI--SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWY 851 (1057)
T ss_pred CCCccHHHHhhcCeeeEe--cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999954 6777 589999999984 99999987 8899999999999999999999999988888
Q ss_pred HHhcCC---chhHHHHHHHHHHhhhhhhHhhhcc--cCCCCCcccCCCCC---CCcccccchhhHHHHHHHHHHHHHHHH
Q psy6866 842 IFLGIP---LPVSTVTVLCIDLGTDMWPAVSLAY--EKPESNIMSREPRN---PRTDHLVGRKLVTYAYFHLGILETLAG 913 (961)
Q Consensus 842 ~~~~~~---~pl~~~q~l~i~li~d~~~~lal~~--e~~~~~~~~~~P~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~ 913 (961)
.+++.. .++.+++++|+|++++.+|++++|. +++++++|.++|+. .+.++.++.+.|+.+ +..|+++++++
T Consensus 852 ~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~-~~~~~~~~~ii 930 (1057)
T TIGR01652 852 SFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGW-MLDGIYQSLVI 930 (1057)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHH-HHHHHHHHHHH
Confidence 776533 4689999999999999999999974 45678899999973 235678888887764 45799999988
Q ss_pred HHHHHHHHh
Q psy6866 914 FLTYFHVMY 922 (961)
Q Consensus 914 ~~~~~~~~~ 922 (961)
|+..++.+.
T Consensus 931 ~~~~~~~~~ 939 (1057)
T TIGR01652 931 FFFPMFAYI 939 (1057)
T ss_pred HHHHHHHHc
Confidence 876555554
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-98 Score=859.52 Aligned_cols=745 Identities=23% Similarity=0.300 Sum_probs=583.7
Q ss_pred CCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHH
Q psy6866 132 DRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALT 211 (961)
Q Consensus 132 ~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 211 (961)
.+||+..++.+|+..||+|.+..+. ++.+.+++++..++|..+..+.-+++. . .+|+|++++++++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~fSv~lW~----~---------d~Y~~YA~cI~ii 223 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAFSVALWL----A---------DSYYYYAFCIVII 223 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhHHhhhhh----c---------ccchhhhhHHHHH
Confidence 5899999999999999999999874 789999999877777666544433322 1 1578889999999
Q ss_pred HhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecC-CCeeeccEEEEeeCCceeeccCc
Q psy6866 212 CIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKI-GDKVPADIRLIEIQDLKAENSSL 290 (961)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~-Gd~IPaD~ill~g~~l~vdeS~L 290 (961)
.+.+++.+.|+.+++++.++++-+.. ..|+|+|||.+++|.++|||||||+++.+ |-..|||++|++|+ |.||||||
T Consensus 224 sv~Si~~sv~e~r~qs~rlr~mv~~~-~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmL 301 (1140)
T KOG0208|consen 224 SVYSIVLSVYETRKQSIRLRSMVKFT-CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESML 301 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccc
Confidence 99999999999999988887766653 58999999999999999999999999998 99999999999976 57999999
Q ss_pred cccccceeccCCCCCC---------ccccCcceEeeeeeeee------eceEEEEEEcCCcChhhhHHhhhccccCCCCc
Q psy6866 291 TGEVEPVTCTLGATNS---------FAVESRNLVFFSTNLVS------GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTP 355 (961)
Q Consensus 291 TGEs~pv~k~~~~~~~---------~~~~~~n~l~~Gt~v~~------G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~ 355 (961)
||||.||.|.+..... ....++|.+|+||.+++ |.+.++|++||.+|..|++.+.+..+++....
T Consensus 302 TGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fk 381 (1140)
T KOG0208|consen 302 TGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFK 381 (1140)
T ss_pred cCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccH
Confidence 9999999999875211 12246899999999985 66899999999999999999988877776667
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccch
Q psy6866 356 IEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQT 435 (961)
Q Consensus 356 l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~ 435 (961)
+-++..+|+..+++++++-.+...+.....+.+....+++++.++++.+|+|||++++++..++.+||.|+||+|.++++
T Consensus 382 fyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~r 461 (1140)
T KOG0208|consen 382 FYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQR 461 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccc
Confidence 77888788877777766444444444445678888999999999999999999999999999999999999999999999
Q ss_pred hhhccceeEEEecCcCccccCceEEEEEEEccee-eeec--Ccccccc-cc---c---CCchHHHHHHHHHHHccCceec
Q psy6866 436 VETLGSIRTICTDKTGTLTQNKMTVLHLSFNREI-YHVK--NGVDVDI-QN---F---ETNTTYKTLVRAACLCSKAEFE 505 (961)
Q Consensus 436 ~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-~~~~--~~~~~~~-~~---~---~~~~~~~~l~~~~~~c~~~~~~ 505 (961)
+...|++|++|||||||||++.+.+..+..-... .... .....+. +. + .....+..+..++|.||+....
T Consensus 462 In~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v 541 (1140)
T KOG0208|consen 462 INLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLV 541 (1140)
T ss_pred eeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEe
Confidence 9999999999999999999999999888752211 0000 0000000 00 0 0112345688999999977644
Q ss_pred CCCCCcccccccccCChhHHHHHHhhcccc--------------------cchhh---------HhhcCCeEEEecCCCC
Q psy6866 506 PNQDNIPMRERKASGDATEVGILHFIQPRI--------------------KSIQD---------VRNTFPKVTEVPFNSL 556 (961)
Q Consensus 506 ~~~~~~~~~~~~~~g~~~e~all~~~~~~~--------------------~~~~~---------~~~~~~~~~~~~F~s~ 556 (961)
.+. ..|||.|.-+.+...+.. ..+.. -...+.+++.+||+|.
T Consensus 542 ~g~---------l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~ 612 (1140)
T KOG0208|consen 542 DGT---------LVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSA 612 (1140)
T ss_pred CCe---------eccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchh
Confidence 332 233333333332222110 00000 0114667899999999
Q ss_pred CeeEEEEEEcCC-CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCC
Q psy6866 557 NKFHLTVHFSPL-NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFP 635 (961)
Q Consensus 557 ~k~~~~v~~~~~-~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~ 635 (961)
-+||++|+..++ ++..+|+|||||.|.+.|++... +..+++.++.|+.+|+||+|+|+|+++...+.
T Consensus 613 LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tv------------P~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~ 680 (1140)
T KOG0208|consen 613 LRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETV------------PADYQEVLKEYTHQGFRVIALASKELETSTLQ 680 (1140)
T ss_pred hheEEEEEecCCCCceEeeccCCHHHHHHhcCcccC------------CccHHHHHHHHHhCCeEEEEEecCccCcchHH
Confidence 999999998854 56899999999999999985433 34578889999999999999999999875332
Q ss_pred CCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCC------
Q psy6866 636 VNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSD------ 709 (961)
Q Consensus 636 ~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~------ 709 (961)
+..+. .++.+|+||+|+|++.|||++|++++.+|++|++|+||++|+||||..||..+||+||++.+....
T Consensus 681 ~~~~~---~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~ 757 (1140)
T KOG0208|consen 681 KAQKL---SRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELE 757 (1140)
T ss_pred HHhhc---cHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEecc
Confidence 22223 344589999999999999999999999999999999999999999999999999999998754220
Q ss_pred ----------------------------------------------ceeEechhhccC---CHHHHHHHHHhcCceEEee
Q psy6866 710 ----------------------------------------------DNVFTGTDLRKI---TDEELKDILETNKELVFAR 740 (961)
Q Consensus 710 ----------------------------------------------~~v~~g~~~~~~---~~~~~~~~~~~~~~~v~ar 740 (961)
...++|+.+.-+ ..+.+++++.+.. ||||
T Consensus 758 ~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~--VfAR 835 (1140)
T KOG0208|consen 758 PPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGT--VFAR 835 (1140)
T ss_pred CCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCe--EEee
Confidence 233445444332 3456677777765 9999
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNL 820 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni 820 (961)
|+|.||.++|+.||+.|+.|+|||||+|||.|||+|||||+++. ..|.-||.+.-.-.+...+...|++||.....-
T Consensus 836 MsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrEGRaALVTS 912 (1140)
T KOG0208|consen 836 MSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVIREGRAALVTS 912 (1140)
T ss_pred cCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHHhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999862 346778899988889999999999999999888
Q ss_pred HHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHH
Q psy6866 821 KKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTY 900 (961)
Q Consensus 821 ~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~ 900 (961)
-..++|...+.+...+..+ .++.....++..|.|+++++..+.-++.+++.+|..++-..||. ..+++++.+.-
T Consensus 913 f~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~----~~L~s~~~~~~ 986 (1140)
T KOG0208|consen 913 FACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPP----TNLLSKKILVP 986 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCC----ccccccchhhh
Confidence 8888888877766654322 23345667899999999999988889999999999888776663 45677666554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy6866 901 AYFHLGILETLAGFLTYFHVMYDAGWDP 928 (961)
Q Consensus 901 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 928 (961)
-.+| -++..+..+..|+++....|+.|
T Consensus 987 l~~q-~vli~l~q~i~~l~~~~qpw~~p 1013 (1140)
T KOG0208|consen 987 LLLQ-IVLICLVQWILTLIVEPQPWYEP 1013 (1140)
T ss_pred hHHH-HHHHHHHHHhhheeeccccceec
Confidence 3333 44456666666777766777664
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-94 Score=901.55 Aligned_cols=748 Identities=19% Similarity=0.240 Sum_probs=581.6
Q ss_pred hcCCCccCCccccchHHHHHHHHHhhHH----HHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHH
Q psy6866 146 KDGPNSLPQKYRINNVYVLVGYIFRGFS----ALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFY 221 (961)
Q Consensus 146 ~~G~N~i~~~~~~~~~~~~~~~l~~~~~----~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (961)
+|..|.+...+ .++|-++.+.++++|. +.+++.+++.++. .... ...+...++++++++++++.+.+
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip---~~s~-----~~~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLP---QLAV-----FGRGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCC---Cccc-----CCcchHHHHHHHHHHHHHHHHHH
Confidence 58999998865 6677777777776664 4444444444322 1111 12234566788888888888888
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeeccCccccccce
Q psy6866 222 QERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAENSSLTGEVEPV 297 (961)
Q Consensus 222 ~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vdeS~LTGEs~pv 297 (961)
++++++++.+..+ +..++|+|+|++++++|++|+|||+|+|++||++||||+|+++++ +.||||+|||||.|+
T Consensus 157 Ed~~r~k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k 233 (1178)
T PLN03190 157 EDWRRHRSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLK 233 (1178)
T ss_pred HHHHHHHhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeee
Confidence 8888777776654 468999999999999999999999999999999999999998654 899999999999999
Q ss_pred eccCCCCCC-----------------------------------ccccCcceEeeeeeeee-eceEEEEEEcCCcChhhh
Q psy6866 298 TCTLGATNS-----------------------------------FAVESRNLVFFSTNLVS-GSGKGVVILTGSNTVMGK 341 (961)
Q Consensus 298 ~k~~~~~~~-----------------------------------~~~~~~n~l~~Gt~v~~-G~~~~vV~~tG~~T~~g~ 341 (961)
.|.+++... .++..+|++++|+.+.+ .++.|+|++||.+| |
T Consensus 234 ~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K 310 (1178)
T PLN03190 234 TRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---K 310 (1178)
T ss_pred EecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---h
Confidence 998653210 12345788999999886 46999999999999 6
Q ss_pred HHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hc------cH--------------------HH-
Q psy6866 342 IAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYI---GY------NW--------------------LN- 391 (961)
Q Consensus 342 i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~---~~------~~--------------------~~- 391 (961)
++.+....+.|.+++++.++++..+++.+.++++++++++...+ .. .| ..
T Consensus 311 ~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1178)
T PLN03190 311 AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEI 390 (1178)
T ss_pred HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHH
Confidence 66666667789999999999999998888887877766654221 00 01 11
Q ss_pred HHHHH--HHhhhhccCchhHHHHHHHHHHHHHHhhccc----------ccccccchhhhccceeEEEecCcCccccCceE
Q psy6866 392 ACVYV--IGIIVANVPEGLLATLTVSLTLTAKRLASKN----------CIVRRLQTVETLGSIRTICTDKTGTLTQNKMT 459 (961)
Q Consensus 392 ~~~~~--i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~ 459 (961)
.+.++ +.++...+|++|++++++++...+.+|.++. +.||+.+.+|+||+|++||+|||||||+|+|+
T Consensus 391 ~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~ 470 (1178)
T PLN03190 391 FFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 470 (1178)
T ss_pred HHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEE
Confidence 12222 3344578999999999999988888887765 77999999999999999999999999999999
Q ss_pred EEEEEEcceeeeecCcc----------ccccc------cc----------------CCchHHHHHHHHHHHccCceecCC
Q psy6866 460 VLHLSFNREIYHVKNGV----------DVDIQ------NF----------------ETNTTYKTLVRAACLCSKAEFEPN 507 (961)
Q Consensus 460 v~~~~~~~~~~~~~~~~----------~~~~~------~~----------------~~~~~~~~l~~~~~~c~~~~~~~~ 507 (961)
++++++++..|...... ..++. .. +......+++.++++||++.+...
T Consensus 471 fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~ 550 (1178)
T PLN03190 471 FQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVV 550 (1178)
T ss_pred EEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeecc
Confidence 99999988777432100 00000 00 001224568899999999876421
Q ss_pred CC--Cccc-ccccccCChhHHHHHHhhccccc------------chhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEE
Q psy6866 508 QD--NIPM-RERKASGDATEVGILHFIQPRIK------------SIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYF 572 (961)
Q Consensus 508 ~~--~~~~-~~~~~~g~~~e~all~~~~~~~~------------~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~ 572 (961)
++ +... ...+..++|+|.||+.++...|. +..+.+..|+++.++||+|+||||+++++.++++++
T Consensus 551 ~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~ 630 (1178)
T PLN03190 551 DDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVK 630 (1178)
T ss_pred CCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEE
Confidence 11 1000 11245669999999999987664 344456778999999999999999999988888899
Q ss_pred EEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCcc-CC----------
Q psy6866 573 LLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK-FS---------- 641 (961)
Q Consensus 573 ~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~-~~---------- 641 (961)
+|+|||||.|+++|+... +.+.++.+.+.+++|+++|+|||++|+|.++++++..+.. +.
T Consensus 631 l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~ 701 (1178)
T PLN03190 631 VFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRA 701 (1178)
T ss_pred EEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhH
Confidence 999999999999997532 1234567788899999999999999999998765543211 00
Q ss_pred ---CCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC----------
Q psy6866 642 ---TDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------- 708 (961)
Q Consensus 642 ---~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------- 708 (961)
.+..+.+|+||+++|+++++|++|++++++|+.|+++||++||+|||+..||.+||++|||++++..
T Consensus 702 ~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~ 781 (1178)
T PLN03190 702 ALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKE 781 (1178)
T ss_pred HHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchh
Confidence 0112347899999999999999999999999999999999999999999999999999999765421
Q ss_pred ------------------------------------CceeEechhhccCCH----HHHHHHHHhcCceEEeecCHHHHHH
Q psy6866 709 ------------------------------------DDNVFTGTDLRKITD----EELKDILETNKELVFARTSPLQKLR 748 (961)
Q Consensus 709 ------------------------------------~~~v~~g~~~~~~~~----~~~~~~~~~~~~~v~ar~~p~~K~~ 748 (961)
..++++|.++..+.+ +++.++..+++.+||||++|.||++
T Consensus 782 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 782 SCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred hHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHH
Confidence 136888888887754 5677888888888999999999999
Q ss_pred HHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEeecCCccH--hhhhccceEeecCCchHHHHHH-HHHHHHHHHHHHHH
Q psy6866 749 IVELYQSL-DEIVAVTGDGVNDAPALKKADIGIAMGITGSE--VSKQTADMILMDDNFASIVLGI-EEGRLIFDNLKKSI 824 (961)
Q Consensus 749 iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~--~a~~aad~vl~~~~~~~i~~~i-~~gR~~~~ni~~~i 824 (961)
+|+.+|+. +++|+|||||+||++||++||||| |+.|+| .|..+||+.+.+..+ +.+++ .|||+.|.|+.+.+
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~Fr~--L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQFRF--LVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhhhHH--HHHHHHHhCHHHHHHHHHHH
Confidence 99999987 589999999999999999999999 778999 789999999996554 55444 48999999999999
Q ss_pred HHHHhhhHhhHHHHHHHHHhcCCch---hHHHHHHHHHHhhhhhhHhhh-cccCC-CCCcccCCCCC---CCcccccchh
Q psy6866 825 AYILASNIPEILPFLFYIFLGIPLP---VSTVTVLCIDLGTDMWPAVSL-AYEKP-ESNIMSREPRN---PRTDHLVGRK 896 (961)
Q Consensus 825 ~~~l~~ni~~i~~~~~~~~~~~~~p---l~~~q~l~i~li~d~~~~lal-~~e~~-~~~~~~~~P~~---~~~~~~~~~~ 896 (961)
+|.+++|++.+++.++|.++...++ ...+.+.++|++++.+|.+++ .+|+. +++.+.+.|.- .+.+..++.+
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 9999999999999999988876554 467888899999999999998 46652 44455556632 2356678888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 897 LVTYAYFHLGILETLAGFLTYFHVMY 922 (961)
Q Consensus 897 ~~~~~~~~~g~~~~~~~~~~~~~~~~ 922 (961)
.|+. |...|+++++++|+..++.+.
T Consensus 1018 ~F~~-w~~~~i~qs~iiff~~~~~~~ 1042 (1178)
T PLN03190 1018 LFWL-TMIDTLWQSAVVFFVPLFAYW 1042 (1178)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 8776 455799999998876555544
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-90 Score=812.32 Aligned_cols=555 Identities=22% Similarity=0.307 Sum_probs=445.8
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHH----HHHHHHHHHHHHHHHhccCCC-ee
Q psy6866 167 YIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMF----SFYQERKSSHITESFAKMIPT-RA 241 (961)
Q Consensus 167 ~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~-~~ 241 (961)
++++++.++++++++++++...+........| ..+++++++++++++.++ +.++|+|+++..+.|+++.++ ++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~--~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFHQESV--SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 34578889999999999865433211111111 123444444444444444 444578999999999999886 67
Q ss_pred E-EEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeee
Q psy6866 242 T-VIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTN 320 (961)
Q Consensus 242 ~-V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~ 320 (961)
+ |.|||++++|++++|+|||+|.|++||+|||||+|++|.. .||||+|||||.||.|.+|.. +++ +|+||.
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d------~~~-V~aGT~ 178 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGD------FDN-VIGGTS 178 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCc------cCe-eecCce
Confidence 6 6799999999999999999999999999999999999865 999999999999999998721 123 999999
Q ss_pred eeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhh
Q psy6866 321 LVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGII 400 (961)
Q Consensus 321 v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vl 400 (961)
+.+|++.++|+++|.+|.+||+..+++..+.++||+|.....+...++.+.+++. .++..+....++...+.+.++++
T Consensus 179 v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~--~~~~~~~~~~~~~~~~~~~val~ 256 (673)
T PRK14010 179 VASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVI--LTMYPLAKFLNFNLSIAMLIALA 256 (673)
T ss_pred eecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHH--HHHHHHHhhccHHHHHHHHHHHH
Confidence 9999999999999999999999999999998999999776665544433222211 11111111123445667778888
Q ss_pred hhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccc
Q psy6866 401 VANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDI 480 (961)
Q Consensus 401 v~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 480 (961)
+++|||+|+..++++.+.++.||+|+|+++|+++++|+||++|++|||||||||+|++.++++...+
T Consensus 257 V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------- 323 (673)
T PRK14010 257 VCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------- 323 (673)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------
Confidence 8899999999999999999999999999999999999999999999999999999887766543211
Q ss_pred cccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeE
Q psy6866 481 QNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFH 560 (961)
Q Consensus 481 ~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~ 560 (961)
....++++..+++|+.. ..+|.+.|+++++.+.+.+... .....+||++++|+|
T Consensus 324 -----~~~~~~ll~~a~~~~~~----------------s~~P~~~AIv~~a~~~~~~~~~-----~~~~~~pF~~~~k~~ 377 (673)
T PRK14010 324 -----SSSFERLVKAAYESSIA----------------DDTPEGRSIVKLAYKQHIDLPQ-----EVGEYIPFTAETRMS 377 (673)
T ss_pred -----CccHHHHHHHHHHhcCC----------------CCChHHHHHHHHHHHcCCCchh-----hhcceecccccccee
Confidence 01223467777778632 1267888999988754322211 122358999999988
Q ss_pred EEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccC
Q psy6866 561 LTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKF 640 (961)
Q Consensus 561 ~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~ 640 (961)
.+.+. ++ .+.||+++.++++|+. .|...+ ..+.+..++++++|+|+++++
T Consensus 378 gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~v~--------------- 427 (673)
T PRK14010 378 GVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKGVSKKGGTPLVVL--------------- 427 (673)
T ss_pred EEEEC---CE--EEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHHHHhCCCeEEEEE---------------
Confidence 87642 32 4559999999999984 222211 124556678899999999876
Q ss_pred CCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhcc
Q psy6866 641 STDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRK 720 (961)
Q Consensus 641 ~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~ 720 (961)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 2468999999999999999999999999999999999999999999999999954
Q ss_pred CCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeec
Q psy6866 721 ITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMD 800 (961)
Q Consensus 721 ~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~ 800 (961)
+|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+|++|
T Consensus 483 ----------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLld 545 (673)
T PRK14010 483 ----------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLD 545 (673)
T ss_pred ----------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcC
Confidence 89999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHh
Q psy6866 801 DNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFL 844 (961)
Q Consensus 801 ~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~ 844 (961)
|||+.|++++++||++|.|+++++.|.++.|+..++.++...|.
T Consensus 546 d~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~ 589 (673)
T PRK14010 546 SNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFM 589 (673)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998776654444
|
|
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=758.21 Aligned_cols=745 Identities=26% Similarity=0.423 Sum_probs=573.2
Q ss_pred cCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCC
Q psy6866 116 HLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNE 195 (961)
Q Consensus 116 ~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~ 195 (961)
..++.+++.+.|..+.+ |||.+|+++|+++||+|++..+ +.+.+.+|+..+++|++++.-.+|++.+.. . .++
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEk-ken~~lKFl~Fm~~PlswVMEaAAimA~~L---a--ng~ 91 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEK-KESKFLKFLGFMWNPLSWVMEAAAIMAIGL---A--NGG 91 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhh-hhhHHHHHHHHHhchHHHHHHHHHHHHHHH---h--cCC
Confidence 36788899888876654 9999999999999999999975 467788899999999999988888766432 1 111
Q ss_pred CCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccE
Q psy6866 196 EKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADI 275 (961)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ 275 (961)
..+ ..|.-...+.+++++++.+.|.||+++.+...++++-+..++.|+|||+|.++.+++||||||+.++.|++||||+
T Consensus 92 ~~~-~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDa 170 (942)
T KOG0205|consen 92 GRP-PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADA 170 (942)
T ss_pred CCC-cchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCcc
Confidence 111 1234445566677889999999999999999999998899999999999999999999999999999999999999
Q ss_pred EEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCc
Q psy6866 276 RLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTP 355 (961)
Q Consensus 276 ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~ 355 (961)
+|+++.-+.||+|.|||||.||+|.+|+. +|+||+|.+|++.++|++||.+|..|+-+.++.. -....-
T Consensus 171 RLl~gD~LkiDQSAlTGESLpvtKh~gd~----------vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GH 239 (942)
T KOG0205|consen 171 RLLEGDPLKIDQSALTGESLPVTKHPGDE----------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGH 239 (942)
T ss_pred ceecCCccccchhhhcCCccccccCCCCc----------eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCccc
Confidence 99999999999999999999999999987 9999999999999999999999999999999887 555667
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccHHHHHHHHHHhhhhc-cCchhHHHHHHHHHHHHHHhhccccccccc
Q psy6866 356 IEQEVQHFMRLISMWALTLGAIC-FLLALYIGYNWLNACVYVIGIIVAN-VPEGLLATLTVSLTLTAKRLASKNCIVRRL 433 (961)
Q Consensus 356 l~~~~~~~~~~l~~i~~~~~~i~-~i~~~~~~~~~~~~~~~~i~vlv~~-vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~ 433 (961)
+++-++.+..++.+.+. +++++ .++.++..........+-+.++++. +|.|||..++..++.++.||+++|.+++++
T Consensus 240 FqkVLt~IGn~ci~si~-~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrm 318 (942)
T KOG0205|consen 240 FQKVLTGIGNFCICSIA-LGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRM 318 (942)
T ss_pred HHHHHHhhhhHHHHHHH-HHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHH
Confidence 77777777666544322 22222 2222333333334444445555555 999999999999999999999999999999
Q ss_pred chhhhccceeEEEecCcCccccCceEEEE--E--EEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCC
Q psy6866 434 QTVETLGSIRTICTDKTGTLTQNKMTVLH--L--SFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQD 509 (961)
Q Consensus 434 ~~~e~lg~v~~i~~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~ 509 (961)
.++|.|+.+|++|+|||||||.|+++|.+ + +..+ -.-++++..+|..+.
T Consensus 319 tAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g-------------------v~~D~~~L~A~rAsr-------- 371 (942)
T KOG0205|consen 319 TAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG-------------------VDKDDVLLTAARASR-------- 371 (942)
T ss_pred HHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-------------------CChHHHHHHHHHHhh--------
Confidence 99999999999999999999999999866 2 1111 111235556665542
Q ss_pred CcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcc
Q psy6866 510 NIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTM 589 (961)
Q Consensus 510 ~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~ 589 (961)
....|+.|.|+++... ++.+.+..++.++.+|||+..|+....+..++|+.+..+|||||.|++.|+.
T Consensus 372 -------~en~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~- 439 (942)
T KOG0205|consen 372 -------KENQDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE- 439 (942)
T ss_pred -------hcChhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc-
Confidence 1234667778887654 3567788899999999999999998888889999999999999999999973
Q ss_pred cccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChH
Q psy6866 590 MAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVP 669 (961)
Q Consensus 590 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~ 669 (961)
+.+.++++.+.+++|+++|+|-+++|++..++... +....-..|+|++-+-||+|.+..
T Consensus 440 ----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~-----------~~~g~pw~~~gllp~fdpprhdsa 498 (942)
T KOG0205|consen 440 ----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK-----------ESPGGPWEFVGLLPLFDPPRHDSA 498 (942)
T ss_pred ----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc-----------cCCCCCcccccccccCCCCccchH
Confidence 23456788899999999999999999987765321 112345789999999999999999
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechh-hccCCHHHHHHHHHhcCceEEeecCHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTD-LRKITDEELKDILETNKELVFARTSPLQKLR 748 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~-~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~ 748 (961)
++|++....|+.|.|+|||....++..++++|+-.+-.... .+-|.+ -..+.....+++++..+ -||.+.|+||++
T Consensus 499 ~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss-~llG~~~~~~~~~~~v~elie~ad--gfAgVfpehKy~ 575 (942)
T KOG0205|consen 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS-ALLGLGKDGSMPGSPVDELIEKAD--GFAGVFPEHKYE 575 (942)
T ss_pred HHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCch-hhccCCCCCCCCCCcHHHHhhhcc--CccccCHHHHHH
Confidence 99999999999999999999999999999999865422211 111111 11222334455555544 799999999999
Q ss_pred HHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 749 IVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYIL 828 (961)
Q Consensus 749 iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l 828 (961)
+|+.||++|+.++|+|||+||+|+||.||+|||+. .++|.|+.++|+|++.+.++.|+.++..+|.+|++++.+..|.+
T Consensus 576 iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyav 654 (942)
T KOG0205|consen 576 IVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (942)
T ss_pred HHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeee
Confidence 99999999999999999999999999999999998 89999999999999999999999999999999999999999988
Q ss_pred hhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHH
Q psy6866 829 ASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGIL 908 (961)
Q Consensus 829 ~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~ 908 (961)
+..+-.++.+.+. .+-+..-++|..++.+-++.|. +.++.+.+. .|+.+..+.+.-+.+|...+ .+|.+
T Consensus 655 sitiriv~gfml~-alIw~~df~pfmvliiailnd~-t~mtis~d~--------v~psp~pdswkl~~ifatgv-Vlgty 723 (942)
T KOG0205|consen 655 SITIRIVFGFMLI-ALIWEFDFSPFMVLIIAILNDG-TIMTISKDR--------VKPSPTPDSWKLKEIFATGV-VLGTY 723 (942)
T ss_pred hhHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHhcCC-ceEEEEccc--------CCCCCCCcccchhhhheeee-EehhH
Confidence 7666554332221 1122334566666666655553 334444332 22233334444444554332 24666
Q ss_pred HHHHHHHHHHHHHhhcCCCCccccccccc--cCCC----Cc----------cccccCcccccccc
Q psy6866 909 ETLAGFLTYFHVMYDAGWDPMDLLNIRKS--WESN----NN----------LEDSYHKMWTRTER 957 (961)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~----------~~~~~~~~~~~~~~ 957 (961)
+++.+ ..|||+.+...|.+ ..||+.+. |..+ .. +.-..+..|.|.||
T Consensus 724 ma~~t-vif~w~~~~t~ff~-~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~er 786 (942)
T KOG0205|consen 724 MAIMT-VIFFWAAYTTDFFP-RTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVER 786 (942)
T ss_pred HHHHH-HHHhhhhccccccc-cccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccC
Confidence 55554 34666666666666 55666533 3222 11 45567888888887
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-88 Score=794.22 Aligned_cols=547 Identities=24% Similarity=0.311 Sum_probs=450.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhhccc-CCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCC-eeEEE
Q psy6866 167 YIFRGFSALLWFGALLSFLAYLLEAET-NEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPT-RATVI 244 (961)
Q Consensus 167 ~l~~~~~~~l~~~ails~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~V~ 244 (961)
++.+++.++++++++++++........ ....+...+.+++++++.+++..+.+.++++|+++..+.|+++.+. +++|+
T Consensus 30 ~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vi 109 (679)
T PRK01122 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKL 109 (679)
T ss_pred HhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 456788999999999998765432211 1112224455566677777778888899999999999999999885 79999
Q ss_pred ECCe-EEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeee
Q psy6866 245 RNGS-VKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVS 323 (961)
Q Consensus 245 R~G~-~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~ 323 (961)
|||+ +++|++++|+|||+|.|++||+|||||+|++|. ..||||+|||||.||.|.+|+. ..| +|+||.+.+
T Consensus 110 r~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~------~~~-V~aGT~v~~ 181 (679)
T PRK01122 110 REPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGD------FSS-VTGGTRVLS 181 (679)
T ss_pred ECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCc------cCe-EEeceEEEe
Confidence 9988 899999999999999999999999999999986 5999999999999999998853 123 999999999
Q ss_pred eceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhc
Q psy6866 324 GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVAN 403 (961)
Q Consensus 324 G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~ 403 (961)
|.++++|+++|.+|.+|++..+++..+.+++|++...+.+...+..+.++++++.+.++++.+..+ .+.+++++++++
T Consensus 182 G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~--~l~~~iallV~a 259 (679)
T PRK01122 182 DWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGAL--SITVLVALLVCL 259 (679)
T ss_pred eeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHc
Confidence 999999999999999999999999998999999988888776665544443333333333333333 677889999999
Q ss_pred cCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccccccc
Q psy6866 404 VPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNF 483 (961)
Q Consensus 404 vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 483 (961)
|||+|+..+++....++.||+|+|+++|+++++|+||++|++|||||||||+|+|++++++..+.
T Consensus 260 iP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--------------- 324 (679)
T PRK01122 260 IPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG--------------- 324 (679)
T ss_pred ccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999988763211
Q ss_pred CCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEE
Q psy6866 484 ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTV 563 (961)
Q Consensus 484 ~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v 563 (961)
...++++.++++|+... . +|...|+++++... .........++..+.+||++.++++.+.
T Consensus 325 ---~~~~~ll~~a~~~s~~s------~----------hP~~~AIv~~a~~~-~~~~~~~~~~~~~~~~pF~s~~~~~gv~ 384 (679)
T PRK01122 325 ---VTEEELADAAQLSSLAD------E----------TPEGRSIVVLAKQR-FNLRERDLQSLHATFVPFSAQTRMSGVD 384 (679)
T ss_pred ---CCHHHHHHHHHHhcCCC------C----------CchHHHHHHHHHhh-cCCCchhhccccceeEeecCcCceEEEE
Confidence 11234677778876532 1 23446888887642 1111111124567789999998877764
Q ss_pred EEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCC
Q psy6866 564 HFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTD 643 (961)
Q Consensus 564 ~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~ 643 (961)
+. + ..+.||++|.+++.|.. .|.. .++++++..++++++|.|++++|+
T Consensus 385 ~~---g--~~~~kGa~e~il~~~~~----~g~~------~~~~~~~~~~~~a~~G~~~l~va~----------------- 432 (679)
T PRK01122 385 LD---G--REIRKGAVDAIRRYVES----NGGH------FPAELDAAVDEVARKGGTPLVVAE----------------- 432 (679)
T ss_pred EC---C--EEEEECCHHHHHHHHHh----cCCc------ChHHHHHHHHHHHhCCCcEEEEEE-----------------
Confidence 42 3 57899999999999963 2222 124566778889999999999982
Q ss_pred CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCH
Q psy6866 644 PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITD 723 (961)
Q Consensus 644 ~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~ 723 (961)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 433 -------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------- 486 (679)
T PRK01122 433 -------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------- 486 (679)
T ss_pred -------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-------------------
Confidence 458999999999999999999999999999999999999999999999999953
Q ss_pred HHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCc
Q psy6866 724 EELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNF 803 (961)
Q Consensus 724 ~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~ 803 (961)
+|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||
T Consensus 487 -------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 487 -------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred -------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCH
Confidence 89999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy6866 804 ASIVLGIEEGRLIFDNLKKSIAYILAS 830 (961)
Q Consensus 804 ~~i~~~i~~gR~~~~ni~~~i~~~l~~ 830 (961)
++|++++++||++.-.--..-.|.+..
T Consensus 553 s~Iv~av~~GR~~~~tr~~~~~f~~~n 579 (679)
T PRK01122 553 TKLIEVVEIGKQLLMTRGALTTFSIAN 579 (679)
T ss_pred HHHHHHHHHHHHHHhhhHhhhhhhHHH
Confidence 999999999999985555555666653
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-83 Score=754.23 Aligned_cols=556 Identities=23% Similarity=0.311 Sum_probs=448.8
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhH---HHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCC-eeE
Q psy6866 167 YIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWL---GIILALTCIVTGMFSFYQERKSSHITESFAKMIPT-RAT 242 (961)
Q Consensus 167 ~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~ 242 (961)
++.+++.++++++++++++..+.............|+. .+++++.+++..+.+.++++|+++..++|+++.++ .++
T Consensus 29 ~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~ 108 (675)
T TIGR01497 29 QWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAK 108 (675)
T ss_pred HhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 45578888999999999876443111111001011222 34445556667778889999999999999998876 488
Q ss_pred EEE-CCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeee
Q psy6866 243 VIR-NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNL 321 (961)
Q Consensus 243 V~R-~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v 321 (961)
|+| ||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.||.|.+|+.. ..+|+||.+
T Consensus 109 vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~-------~~V~aGT~v 180 (675)
T TIGR01497 109 LLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDF-------ASVTGGTRI 180 (675)
T ss_pred EEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCc-------ceeecCcEE
Confidence 885 899999999999999999999999999999999985 69999999999999999988631 128999999
Q ss_pred eeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhh
Q psy6866 322 VSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIV 401 (961)
Q Consensus 322 ~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv 401 (961)
.+|++.++|+++|.+|.+|++..+++..+.+++|+|...+.+...+.++.+++.++++.+..+.+ ....+..++++++
T Consensus 181 ~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~--~~~~~~~lvallV 258 (675)
T TIGR01497 181 LSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGG--NAISVTVLVALLV 258 (675)
T ss_pred EeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--hhHHHHHHHHHHH
Confidence 99999999999999999999999999988899999988887776655444333322222111222 2235667789999
Q ss_pred hccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccccccc
Q psy6866 402 ANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQ 481 (961)
Q Consensus 402 ~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 481 (961)
++|||+|+..++.....++.||+|+|+++|++.++|+||++|++|||||||||+|+|++++++..+.
T Consensus 259 ~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------- 325 (675)
T TIGR01497 259 CLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG------------- 325 (675)
T ss_pred HhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-------------
Confidence 9999988777777777899999999999999999999999999999999999999999998764211
Q ss_pred ccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEE
Q psy6866 482 NFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHL 561 (961)
Q Consensus 482 ~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~ 561 (961)
...++++..+++|+... .+|.+.|+++++...+..... ..++.....||++.++++.
T Consensus 326 -----~~~~~ll~~aa~~~~~s----------------~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~pf~~~~~~sg 382 (675)
T TIGR01497 326 -----VDEKTLADAAQLASLAD----------------DTPEGKSIVILAKQLGIREDD--VQSLHATFVEFTAQTRMSG 382 (675)
T ss_pred -----CcHHHHHHHHHHhcCCC----------------CCcHHHHHHHHHHHcCCCccc--cccccceEEEEcCCCcEEE
Confidence 11234777777775421 235667899887754332211 1234567899999988776
Q ss_pred EEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCC
Q psy6866 562 TVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFS 641 (961)
Q Consensus 562 ~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~ 641 (961)
+.+. ++ ..+.||++|.+++.|.. +|... +..+++.+++++++|.|++++|+
T Consensus 383 ~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~------~~~~~~~~~~~a~~G~r~l~va~--------------- 433 (675)
T TIGR01497 383 INLD--NG--RMIRKGAVDAIKRHVEA----NGGHI------PTDLDQAVDQVARQGGTPLVVCE--------------- 433 (675)
T ss_pred EEEe--CC--eEEEECCHHHHHHHHHh----cCCCC------cHHHHHHHHHHHhCCCeEEEEEE---------------
Confidence 5443 23 57899999999999862 22221 23466778889999999999983
Q ss_pred CCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccC
Q psy6866 642 TDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKI 721 (961)
Q Consensus 642 ~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~ 721 (961)
|.+++|+++++||+||+++++|++||++|++++|+|||+..+|.++|+++|+..
T Consensus 434 ---------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----------------- 487 (675)
T TIGR01497 434 ---------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----------------- 487 (675)
T ss_pred ---------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-----------------
Confidence 248999999999999999999999999999999999999999999999999953
Q ss_pred CHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecC
Q psy6866 722 TDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDD 801 (961)
Q Consensus 722 ~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~ 801 (961)
+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|++.++++||++++||
T Consensus 488 ---------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd 551 (675)
T TIGR01497 488 ---------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDS 551 (675)
T ss_pred ---------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCC
Confidence 89999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHH
Q psy6866 802 NFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFL 839 (961)
Q Consensus 802 ~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~ 839 (961)
||++|++++++||+++-+......|.++.++.-.+.++
T Consensus 552 ~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~ 589 (675)
T TIGR01497 552 DPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAII 589 (675)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHH
Confidence 99999999999999999999999999988776554433
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-79 Score=717.67 Aligned_cols=505 Identities=27% Similarity=0.370 Sum_probs=428.6
Q ss_pred hhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCeEEEEECCCcccceEEEecCCCeeeccEEEEe
Q psy6866 201 NLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIR-NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIE 279 (961)
Q Consensus 201 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R-~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~ 279 (961)
|+..+.++++++.+..+++.+...|+++.++.|.++.|+++++++ ||++++|+.+||+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 345566677777778888888888999999999999999998877 5669999999999999999999999999999999
Q ss_pred eCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHH
Q psy6866 280 IQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQE 359 (961)
Q Consensus 280 g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~ 359 (961)
|++ .+|||+|||||.||.|.+|+. +++||.+.+|.....|+++|.+|.+++|.+++++++..++|+|+.
T Consensus 253 G~s-~vDeS~iTGEs~PV~k~~Gd~----------V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrl 321 (713)
T COG2217 253 GSS-SVDESMLTGESLPVEKKPGDE----------VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRL 321 (713)
T ss_pred CcE-EeecchhhCCCCCEecCCCCE----------EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHH
Confidence 987 799999999999999999986 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhh
Q psy6866 360 VQHFMRLISMWALTLGAICFLLALYIG-YNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVET 438 (961)
Q Consensus 360 ~~~~~~~l~~i~~~~~~i~~i~~~~~~-~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~ 438 (961)
+++++.++++.+++++++.|++|++.+ .+|...+..++++|+++|||+|.++.|++...+..+.+++|+++|+..++|.
T Consensus 322 aDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~ 401 (713)
T COG2217 322 ADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALER 401 (713)
T ss_pred HHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHh
Confidence 999999999988989988888887666 5888999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccc
Q psy6866 439 LGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKA 518 (961)
Q Consensus 439 lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~ 518 (961)
++++|+++||||||||+|+|+|+++...+. ..++++..++.... .
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-------------------~e~~~L~laAalE~------~---------- 446 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDG-------------------DEDELLALAAALEQ------H---------- 446 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEecCCC-------------------CHHHHHHHHHHHHh------c----------
Confidence 999999999999999999999998864321 11234444443321 1
Q ss_pred cCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccc
Q psy6866 519 SGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAF 598 (961)
Q Consensus 519 ~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~ 598 (961)
+.+|.-.|+++++...+.. .......+|- +.....+ +| ..+.-|++..+.+.-. .
T Consensus 447 S~HPiA~AIv~~a~~~~~~------~~~~~~~i~G---~Gv~~~v----~g--~~v~vG~~~~~~~~~~----------~ 501 (713)
T COG2217 447 SEHPLAKAIVKAAAERGLP------DVEDFEEIPG---RGVEAEV----DG--ERVLVGNARLLGEEGI----------D 501 (713)
T ss_pred CCChHHHHHHHHHHhcCCC------Cccceeeecc---CcEEEEE----CC--EEEEEcCHHHHhhcCC----------C
Confidence 2234455888876643210 1111233331 1111111 22 3345588877643211 0
Q ss_pred cCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHc
Q psy6866 599 LTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKA 678 (961)
Q Consensus 599 l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 678 (961)
.+. ..+..+.+..+|..++.++ .|.+++|+++++|++|++++++|++||+.
T Consensus 502 ~~~-----~~~~~~~~~~~G~t~v~va------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~ 552 (713)
T COG2217 502 LPL-----LSERIEALESEGKTVVFVA------------------------VDGKLVGVIALADELRPDAKEAIAALKAL 552 (713)
T ss_pred ccc-----hhhhHHHHHhcCCeEEEEE------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHC
Confidence 110 3345667788898877776 34489999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCC
Q psy6866 679 GIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDE 758 (961)
Q Consensus 679 gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~ 758 (961)
|++++|+||||..+|+++|+++||.. ++|.+.|++|.++|+.||++|+
T Consensus 553 Gi~~~mLTGDn~~~A~~iA~~lGId~--------------------------------v~AellPedK~~~V~~l~~~g~ 600 (713)
T COG2217 553 GIKVVMLTGDNRRTAEAIAKELGIDE--------------------------------VRAELLPEDKAEIVRELQAEGR 600 (713)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcChHh--------------------------------heccCCcHHHHHHHHHHHhcCC
Confidence 99999999999999999999999954 8999999999999999999999
Q ss_pred EEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 759 IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 759 ~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
+|+|||||.||+|||++|||||||| +|+|+|+++||++|+++++..++.+++.+|+++++||+|+.|.+.+|.+.+...
T Consensus 601 ~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA 679 (713)
T COG2217 601 KVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679 (713)
T ss_pred EEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 799999999999999999999999999999999999999999999998887543
|
|
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-80 Score=745.10 Aligned_cols=748 Identities=21% Similarity=0.270 Sum_probs=582.1
Q ss_pred HHHhcCCCccCCccccchHHHHHHHHHhhH----HHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHH
Q psy6866 143 RLEKDGPNSLPQKYRINNVYVLVGYIFRGF----SALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMF 218 (961)
Q Consensus 143 r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~----~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 218 (961)
+...|-.|.+...| .+++-++.+.++++| ++.+++.++++++.+. + ...+...+++++++.++++.
T Consensus 28 ~~~~~~~N~i~TtK-Yt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip~~---~------~~~~~~~~pl~~vl~~t~iK 97 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTK-YTLFTFLPKNLFEQFHRVANLYFLFIAILQFIPLS---P------FNPYTTLVPLLFVLGITAIK 97 (1151)
T ss_pred hhccccCCeeEEEe-ccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCccc---c------cCccceeeceeeeehHHHHH
Confidence 44588899998865 445555556666555 5556666666655411 1 12234456777888888999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEECCe-EEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeeccCcccc
Q psy6866 219 SFYQERKSSHITESFAKMIPTRATVIRNGS-VKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAENSSLTGE 293 (961)
Q Consensus 219 ~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~-~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vdeS~LTGE 293 (961)
+.++.+++.+...++++ .++.|.|++. +++..|++|+|||+|.+..++.+|||.+|+++++ |+|++++|+||
T Consensus 98 d~~eD~rR~~~D~~iN~---~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGE 174 (1151)
T KOG0206|consen 98 DAIEDYRRHKQDKEVNN---RKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGE 174 (1151)
T ss_pred HHHhhhhhhhccHHhhc---ceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCc
Confidence 99999888888777665 4788998644 8999999999999999999999999999999765 99999999999
Q ss_pred ccceeccCCCCC-------------------------------------CccccCcceEeeeeeeeee-ceEEEEEEcCC
Q psy6866 294 VEPVTCTLGATN-------------------------------------SFAVESRNLVFFSTNLVSG-SGKGVVILTGS 335 (961)
Q Consensus 294 s~pv~k~~~~~~-------------------------------------~~~~~~~n~l~~Gt~v~~G-~~~~vV~~tG~ 335 (961)
++.+.|...... ..|+..+|++++|+.+.+. .+.|+|++||+
T Consensus 175 tnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~ 254 (1151)
T KOG0206|consen 175 TNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGH 254 (1151)
T ss_pred cccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCC
Confidence 998877541100 0155667899999999874 58899999999
Q ss_pred cChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------------c-----HHHHHHHH
Q psy6866 336 NTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGY--------------N-----WLNACVYV 396 (961)
Q Consensus 336 ~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~--------------~-----~~~~~~~~ 396 (961)
+| +++.+...++.+++++++..++....+.++.+++++++.+...++.. + ....+..+
T Consensus 255 dt---K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~ 331 (1151)
T KOG0206|consen 255 DT---KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTF 331 (1151)
T ss_pred cc---hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHH
Confidence 99 55556667889999999999999988888777777766655432211 0 01122333
Q ss_pred HHhhhhccCchhHHHHHHHHHHHHHHhh----------cccccccccchhhhccceeEEEecCcCccccCceEEEEEEEc
Q psy6866 397 IGIIVANVPEGLLATLTVSLTLTAKRLA----------SKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFN 466 (961)
Q Consensus 397 i~vlv~~vP~~L~~a~~~~l~~~~~~l~----------k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 466 (961)
+.++...+|.+|++.+.+...+.+..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.++
T Consensus 332 ~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~ 411 (1151)
T KOG0206|consen 332 IILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSIN 411 (1151)
T ss_pred HhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeeccccc
Confidence 4456677999999999999988885543 346889999999999999999999999999999999999999
Q ss_pred ceeeeecCccc----------------cccccc-------------CCchHHHHHHHHHHHccCceecCCCCCccccccc
Q psy6866 467 REIYHVKNGVD----------------VDIQNF-------------ETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERK 517 (961)
Q Consensus 467 ~~~~~~~~~~~----------------~~~~~~-------------~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~ 517 (961)
+..|....... ..+..+ ........++.+.|+||+...+...+.. ...+
T Consensus 412 g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~--~~~Y 489 (1151)
T KOG0206|consen 412 GTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG--KLSY 489 (1151)
T ss_pred CcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc--ceee
Confidence 88775432210 000011 1223455788999999999877632221 2246
Q ss_pred ccCChhHHHHHHhhcccccch------------hhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHH
Q psy6866 518 ASGDATEVGILHFIQPRIKSI------------QDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMER 585 (961)
Q Consensus 518 ~~g~~~e~all~~~~~~~~~~------------~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~ 585 (961)
...+|+|.|+++.++..+... ......|+.++.++|+|.||||++|++.++|+..+|||||+.+|.++
T Consensus 490 ~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~er 569 (1151)
T KOG0206|consen 490 EAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFER 569 (1151)
T ss_pred ecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhh
Confidence 778999999999988654321 11235788999999999999999999999999999999999999999
Q ss_pred hhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCC---------C-----CCCCCCCCC
Q psy6866 586 CTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFS---------T-----DPMNFPSSG 651 (961)
Q Consensus 586 c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~---------~-----~~~~~~e~~ 651 (961)
+... ....+++-.+++++||.+|+|++|+|+|.+++++|..|.+.. + +..+.+|+|
T Consensus 570 L~~~----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~ 639 (1151)
T KOG0206|consen 570 LSKN----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKD 639 (1151)
T ss_pred hhhc----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhc
Confidence 9751 223455667789999999999999999999998876543211 0 112357999
Q ss_pred ceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-----------------------
Q psy6866 652 FRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS----------------------- 708 (961)
Q Consensus 652 l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~----------------------- 708 (961)
|+++|.+++||+|+++++++|+.|++||||+||+|||..+||.+|+..|+++.++..
T Consensus 640 L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~ 719 (1151)
T KOG0206|consen 640 LILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKE 719 (1151)
T ss_pred chhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876322
Q ss_pred ---------------------CceeEechhhccCCHH----HHHHHHHhcCceEEeecCHHHHHHHHHHHhh-cCCEEEE
Q psy6866 709 ---------------------DDNVFTGTDLRKITDE----ELKDILETNKELVFARTSPLQKLRIVELYQS-LDEIVAV 762 (961)
Q Consensus 709 ---------------------~~~v~~g~~~~~~~~~----~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~-~g~~V~~ 762 (961)
.++|++|+.+....+. .+..+...|+.+++||++|.||+.+|+..++ .+.++++
T Consensus 720 ~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLA 799 (1151)
T KOG0206|consen 720 TLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLA 799 (1151)
T ss_pred HHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEE
Confidence 3567777776654333 5667778899999999999999999999974 5889999
Q ss_pred EcCCCCCHhhhhhCCeeEeecCCccHh--hhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHH
Q psy6866 763 TGDGVNDAPALKKADIGIAMGITGSEV--SKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLF 840 (961)
Q Consensus 763 vGDG~ND~~al~~AdvGIamg~~g~~~--a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~ 840 (961)
+|||+||++|++.||||| |++|.|. |..+||+.+....|..-. ++.|||+.|.|+.++++|.+++|+...++.++
T Consensus 800 IGDGANDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaqFrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fw 876 (1151)
T KOG0206|consen 800 IGDGANDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQFRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFW 876 (1151)
T ss_pred eeCCCccchheeeCCcCe--eeccchhhhhhhcccchHHHHHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 6677774 777899999988776654 35579999999999999999999999999999
Q ss_pred HHHhcCC---chhHHHHHHHHHHhhhhhhHhhhc-ccC-CCCCcccCCCCCC---CcccccchhhHHHHHHHHHHHHHHH
Q psy6866 841 YIFLGIP---LPVSTVTVLCIDLGTDMWPAVSLA-YEK-PESNIMSREPRNP---RTDHLVGRKLVTYAYFHLGILETLA 912 (961)
Q Consensus 841 ~~~~~~~---~pl~~~q~l~i~li~d~~~~lal~-~e~-~~~~~~~~~P~~~---~~~~~~~~~~~~~~~~~~g~~~~~~ 912 (961)
|.+++.. .....+++.++|++++.+|.++|+ +|+ .+.+.+.+.|..+ +.+..++.+.|+. |...|++++++
T Consensus 877 y~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~-~~~~g~~~sli 955 (1151)
T KOG0206|consen 877 YQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWG-WMLDGFYQSLV 955 (1151)
T ss_pred hhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHH-HHHHHHHhhee
Confidence 9888654 356788999999999999999997 554 4555566666433 2445677777765 34579999999
Q ss_pred HHHHHHHHHh
Q psy6866 913 GFLTYFHVMY 922 (961)
Q Consensus 913 ~~~~~~~~~~ 922 (961)
+|+..+.+++
T Consensus 956 ~Ff~~~~~~~ 965 (1151)
T KOG0206|consen 956 IFFLPYLVFE 965 (1151)
T ss_pred eeeeeHhhhe
Confidence 9977666654
|
|
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-78 Score=663.04 Aligned_cols=669 Identities=21% Similarity=0.285 Sum_probs=507.4
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhccCCCeeEEE-ECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC----ceeec
Q psy6866 213 IVTGMFSFYQERKSSHITESFAKMIPTRATVI-RNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD----LKAEN 287 (961)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~-R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~----l~vde 287 (961)
++...++.++++++++..+. +..+++ |+|.... ++++|++||+|++..+++||||.+++++++ +.+-+
T Consensus 143 l~keavdd~~r~~rd~~~Ns------e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRT 215 (1051)
T KOG0210|consen 143 LIKEAVDDLKRRRRDRELNS------EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRT 215 (1051)
T ss_pred HHHHHHHHHHHHHhhhhhhh------hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEec
Confidence 33334455555544433322 334444 6775555 999999999999999999999999998654 77888
Q ss_pred cCccccccceeccCCC-------------------------------------CCCccccCcceEeeeeeeeeeceEEEE
Q psy6866 288 SSLTGEVEPVTCTLGA-------------------------------------TNSFAVESRNLVFFSTNLVSGSGKGVV 330 (961)
Q Consensus 288 S~LTGEs~pv~k~~~~-------------------------------------~~~~~~~~~n~l~~Gt~v~~G~~~~vV 330 (961)
-.|+||++...|-+-+ .+..++.-+|.++++|.+.+|.+.|+|
T Consensus 216 DQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvV 295 (1051)
T KOG0210|consen 216 DQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVV 295 (1051)
T ss_pred cccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEE
Confidence 8999999876554310 011245567999999999999999999
Q ss_pred EEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHH
Q psy6866 331 ILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLA 410 (961)
Q Consensus 331 ~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~ 410 (961)
+|||.+| +-+.+...++.+-..++.++|.+.+++....++++++..... -.+..|...+++++.++...+|.+|-+
T Consensus 296 vYTG~dt---RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~-g~~~~wyi~~~RfllLFS~IIPISLRv 371 (1051)
T KOG0210|consen 296 VYTGRDT---RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK-GFGSDWYIYIIRFLLLFSSIIPISLRV 371 (1051)
T ss_pred EEecccH---HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh-cCCCchHHHHHHHHHHHhhhceeEEEE
Confidence 9999999 555566777778888899999999998887777766543322 234678889999999999999999999
Q ss_pred HHHHHHHHHHHHhhcc----cccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCccc---------
Q psy6866 411 TLTVSLTLTAKRLASK----NCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVD--------- 477 (961)
Q Consensus 411 a~~~~l~~~~~~l~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~--------- 477 (961)
.+.++...-.+.+..+ |.++|+....|+||+++++.+|||||||+|+|.+++++.+...|..+....
T Consensus 372 nlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~ 451 (1051)
T KOG0210|consen 372 NLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLY 451 (1051)
T ss_pred ehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhh
Confidence 9999999999988876 567999999999999999999999999999999999998876665432110
Q ss_pred ----ccccc------cCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccc----------
Q psy6866 478 ----VDIQN------FETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKS---------- 537 (961)
Q Consensus 478 ----~~~~~------~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~---------- 537 (961)
..+.. -+......++..+.++||+..+..+.++ ...++..+|+|+|+++|.+..|..
T Consensus 452 ~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~g---e~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~it 528 (1051)
T KOG0210|consen 452 TPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDG---EVSYQAASPDEVAIVKWTETVGLKLAKRDRHAIT 528 (1051)
T ss_pred CCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCc---eEEeecCCCCeEEEEEeeeecceEEeecccceEE
Confidence 00100 1134556788999999999886655432 235788999999999998754432
Q ss_pred ---hhhHhhcCCeEEEecCCCCCeeEEEEEEcC-CCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHH
Q psy6866 538 ---IQDVRNTFPKVTEVPFNSLNKFHLTVHFSP-LNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKL 613 (961)
Q Consensus 538 ---~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~-~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~ 613 (961)
..+....|+++..|||+|+.|||..+++.+ .+++..|.|||+.++...-. ..+.+++....
T Consensus 529 L~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq---------------~NdWleEE~gN 593 (1051)
T KOG0210|consen 529 LRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ---------------YNDWLEEECGN 593 (1051)
T ss_pred EecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc---------------cchhhhhhhhh
Confidence 112234688999999999999999998875 68899999999988744322 22456777889
Q ss_pred HHHhcCceeeEeeeecCCCCCCCC------ccCCCC---------CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHc
Q psy6866 614 FASKGERVLAFADLHLGQNNFPVN------FKFSTD---------PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKA 678 (961)
Q Consensus 614 ~a~~G~rvl~~A~~~l~~~~~~~~------~~~~~~---------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~a 678 (961)
||.+|+|++.+|.|.+++++|..- ...+.. ....+|+||.++|+.|.||+++++++.+++.||+|
T Consensus 594 MAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNA 673 (1051)
T KOG0210|consen 594 MAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNA 673 (1051)
T ss_pred hhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhc
Confidence 999999999999999998766421 011111 11257899999999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------------CceeEechhhcc---CCHHHHHHHH
Q psy6866 679 GIRVIMVTGDHPCTAKAIAIKCHILSETSS-------------------------DDNVFTGTDLRK---ITDEELKDIL 730 (961)
Q Consensus 679 gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-------------------------~~~v~~g~~~~~---~~~~~~~~~~ 730 (961)
||++||+|||+.+||+.+|+..++...+.. .+++++|+.+.- .-++|+.++.
T Consensus 674 gikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~ 753 (1051)
T KOG0210|consen 674 GIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELV 753 (1051)
T ss_pred CcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999875543 267888877653 3467888888
Q ss_pred HhcCceEEeecCHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHh--hhhccceEeecCCchHHH
Q psy6866 731 ETNKELVFARTSPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGIAMGITGSEV--SKQTADMILMDDNFASIV 807 (961)
Q Consensus 731 ~~~~~~v~ar~~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~--a~~aad~vl~~~~~~~i~ 807 (961)
..++.+++|||+|+||+++++.+|+. |..||++|||.||+.|+++||+|| |+.|.|. |.-|||+.+.+ |+.+-
T Consensus 754 ~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq--F~Hv~ 829 (1051)
T KOG0210|consen 754 CELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ--FSHVS 829 (1051)
T ss_pred HhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH--HHHHH
Confidence 89999999999999999999999984 899999999999999999999999 6667664 67789999985 55565
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhH---HHHHHHHHHhhhhhhHhhhcccCC-CCCcccC
Q psy6866 808 LGI-EEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVS---TVTVLCIDLGTDMWPAVSLAYEKP-ESNIMSR 882 (961)
Q Consensus 808 ~~i-~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~---~~q~l~i~li~d~~~~lal~~e~~-~~~~~~~ 882 (961)
+++ -|||+.|.|-.+..+|.+-..+........+.....+.|.. .+.|+.+..+.+++|.++|..+.- ++.+-..
T Consensus 830 rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~ 909 (1051)
T KOG0210|consen 830 RLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVL 909 (1051)
T ss_pred HHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhh
Confidence 554 46999999999999998876665544444443333333333 344556777888999999998863 4444444
Q ss_pred CCCCCC---cccccchhhHHHHHHHHHHHHHHHHHH
Q psy6866 883 EPRNPR---TDHLVGRKLVTYAYFHLGILETLAGFL 915 (961)
Q Consensus 883 ~P~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~ 915 (961)
.|.-++ .++.++-+.|+. |..+.++++.+.+.
T Consensus 910 yPELYKeL~kgr~lSYKtF~i-wvLISiYQG~vim~ 944 (1051)
T KOG0210|consen 910 YPELYKELTKGRSLSYKTFFI-WVLISIYQGSVIMY 944 (1051)
T ss_pred hHHHHHHHhcCCccchhhhhh-hhhHHHHcccHHHH
Confidence 452211 334455555554 33456666655544
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-74 Score=703.05 Aligned_cols=499 Identities=25% Similarity=0.336 Sum_probs=427.9
Q ss_pred hHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC
Q psy6866 203 WLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD 282 (961)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~ 282 (961)
..+..+++++.++.+++.++++|+++.+++|.++.|.+++|+|||++++|++++|+|||+|+|++||+|||||+|++|+
T Consensus 207 ~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~- 285 (741)
T PRK11033 207 AEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF- 285 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECc-
Confidence 3455666777788899999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHH
Q psy6866 283 LKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQH 362 (961)
Q Consensus 283 l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~ 362 (961)
..||||+|||||.|+.|.+|+. +|+||.+.+|.+++.|+.+|.+|.+|+|.+++++.+.+++|+|+.+++
T Consensus 286 ~~vdes~lTGEs~Pv~k~~Gd~----------V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~ 355 (741)
T PRK11033 286 ASFDESALTGESIPVERATGEK----------VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDR 355 (741)
T ss_pred EEeecccccCCCCCEecCCCCe----------eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHH
Confidence 5899999999999999999875 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccc
Q psy6866 363 FMRLISMWALTLGAICFLLA-LYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGS 441 (961)
Q Consensus 363 ~~~~l~~i~~~~~~i~~i~~-~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~ 441 (961)
++.++++++++++++.|++| ++.+.+|...+..++++++++|||+|.++.++++..+..+++|+|+++|+++++|+|++
T Consensus 356 ~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~ 435 (741)
T PRK11033 356 FSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGR 435 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhC
Confidence 99999999999999888887 44466788889999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCC
Q psy6866 442 IRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGD 521 (961)
Q Consensus 442 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~ 521 (961)
+|++|||||||||+|+|+|.+++..+.. ..++++..++..+ ..+.+
T Consensus 436 v~~v~fDKTGTLT~g~~~v~~~~~~~~~------------------~~~~~l~~aa~~e----------------~~s~h 481 (741)
T PRK11033 436 VTTVAFDKTGTLTEGKPQVTDIHPATGI------------------SESELLALAAAVE----------------QGSTH 481 (741)
T ss_pred CCEEEEeCCCCCcCCceEEEEEEecCCC------------------CHHHHHHHHHHHh----------------cCCCC
Confidence 9999999999999999999988643210 1123444443321 11345
Q ss_pred hhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEE--EEEcCCCeEEEEEeCChHHHHHHhhcccccCCccccc
Q psy6866 522 ATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLT--VHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFL 599 (961)
Q Consensus 522 ~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~--v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l 599 (961)
|.+.|+++++...+. .+||.++++.+.. +...-+|.. +.-|+++.+.+ +
T Consensus 482 Pia~Ai~~~a~~~~~-------------~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~ 532 (741)
T PRK11033 482 PLAQAIVREAQVRGL-------------AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------------L 532 (741)
T ss_pred HHHHHHHHHHHhcCC-------------CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------------c
Confidence 777899988764321 2466666655431 222223332 23478777532 1
Q ss_pred CHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC
Q psy6866 600 TAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG 679 (961)
Q Consensus 600 ~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag 679 (961)
+ ..+.+.++.+..+|++++++|+ |.+++|+++|+|++|++++++|++|++.|
T Consensus 533 ~----~~~~~~~~~~~~~g~~~v~va~------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~g 584 (741)
T PRK11033 533 A----DAFAGQINELESAGKTVVLVLR------------------------NDDVLGLIALQDTLRADARQAISELKALG 584 (741)
T ss_pred c----HHHHHHHHHHHhCCCEEEEEEE------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCC
Confidence 1 1233446678899999999983 35899999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCE
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI 759 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~ 759 (961)
++++|+|||+..+|.++|+++||. .+++..|++|..+|+.+++. +.
T Consensus 585 i~~~llTGd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K~~~v~~l~~~-~~ 630 (741)
T PRK11033 585 IKGVMLTGDNPRAAAAIAGELGID---------------------------------FRAGLLPEDKVKAVTELNQH-AP 630 (741)
T ss_pred CEEEEEcCCCHHHHHHHHHHcCCC---------------------------------eecCCCHHHHHHHHHHHhcC-CC
Confidence 999999999999999999999993 56789999999999999965 58
Q ss_pred EEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 760 VAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 760 V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
|+|+|||.||+|||++|||||||| +|++.++++||+++.++++..+..++++||+++.||++|+.|.+.+|++.+...
T Consensus 631 v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a 708 (741)
T PRK11033 631 LAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTT 708 (741)
T ss_pred EEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 899999999999999999999999999999999999999999999998766433
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-76 Score=660.12 Aligned_cols=743 Identities=21% Similarity=0.243 Sum_probs=505.7
Q ss_pred cHHHHHHHhhhhccccHHHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCccCCccccchHHH
Q psy6866 85 SKKSILRFIHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSEL-EVKRRLEKDGPNSLPQKYRINNVYV 163 (961)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~-~~~~r~~~~G~N~i~~~~~~~~~~~ 163 (961)
+.++..+|+|.+....+..+. .+.++....++.+ +|+..+ ++..-..+||.|..+.+.+ .+-.+
T Consensus 127 F~Fqk~ry~~~~e~~~F~~~~------------fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eL 191 (1160)
T KOG0209|consen 127 FEFQKKRYLYDEEKGKFSRLT------------FPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIVVP-TFSEL 191 (1160)
T ss_pred EEEEEeeEEEcccccceeccc------------cCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccCCc-cHHHH
Confidence 455777899987555554432 2333344445443 577633 3444444599999887642 34444
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhcc--CCCee
Q psy6866 164 LVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKM--IPTRA 241 (961)
Q Consensus 164 ~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~ 241 (961)
|.+.-..||..+..++..++.+- ++||+.+.-+++++.-..--.+|+.+. +.+++++ .|..+
T Consensus 192 FkE~A~aPfFVFQVFcvgLWCLD-------------eyWYySlFtLfMli~fE~tlV~Qrm~~---lse~R~Mg~kpy~I 255 (1160)
T KOG0209|consen 192 FKEHAVAPFFVFQVFCVGLWCLD-------------EYWYYSLFTLFMLIAFEATLVKQRMRT---LSEFRTMGNKPYTI 255 (1160)
T ss_pred HHHhccCceeeHhHHhHHHHHhH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCceEE
Confidence 55443334333333332222211 567776654444443222223444443 4455544 46788
Q ss_pred EEEECCeEEEEECCCcccceEEEecC---CCeeeccEEEEeeCCceeeccCccccccceeccCCCCCC-------ccccC
Q psy6866 242 TVIRNGSVKEIDSAGLVRGDIVLLKI---GDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNS-------FAVES 311 (961)
Q Consensus 242 ~V~R~G~~~~I~~~eLv~GDIV~l~~---Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~-------~~~~~ 311 (961)
.|+|+++|+.+.++||+|||+|.+.. ...||||.+|+.|++ .||||||||||.|..|.+....+ ...++
T Consensus 256 ~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k 334 (1160)
T KOG0209|consen 256 NVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDK 334 (1160)
T ss_pred EEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCccccccccccCChhhhcccccccc
Confidence 99999999999999999999999977 568999999999875 79999999999999998743211 11234
Q ss_pred cceEeeeeeeee-------------eceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 312 RNLVFFSTNLVS-------------GSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAIC 378 (961)
Q Consensus 312 ~n~l~~Gt~v~~-------------G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~ 378 (961)
.+++|.||.+++ |-+.+.|++||++|..|++.+.+-...++-|.-.++.-.|+..+.+++++.+.-+
T Consensus 335 ~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~Etf~FILFLlVFAiaAa~Yv 414 (1160)
T KOG0209|consen 335 LHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNRETFIFILFLLVFAIAAAGYV 414 (1160)
T ss_pred eEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccHHHHHHHHHHHHHHHHhhheE
Confidence 578999999884 5578999999999999999988777666666655555444444433333222111
Q ss_pred HHHHHHhh-ccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEEEecCcCccccCc
Q psy6866 379 FLLALYIG-YNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNK 457 (961)
Q Consensus 379 ~i~~~~~~-~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~ 457 (961)
++-..-.. .+-...+.-++-+++..+|+-||+-++++...+...|+|.+++|..|-++.-.|++|++|||||||||+..
T Consensus 415 wv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~ 494 (1160)
T KOG0209|consen 415 WVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDD 494 (1160)
T ss_pred EEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCcccccc
Confidence 00000000 12233455566688888999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccc
Q psy6866 458 MTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKS 537 (961)
Q Consensus 458 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~ 537 (961)
|.|.++-.... +.....+..+ .. .+-+.++|.||+...- +...+|||.|.|.++...+....
T Consensus 495 lvv~Gvag~~~----~~~~~~~~s~----~p-~~t~~vlAscHsLv~l---------e~~lVGDPlEKA~l~~v~W~~~k 556 (1160)
T KOG0209|consen 495 LVVEGVAGLSA----DEGALTPASK----AP-NETVLVLASCHSLVLL---------EDKLVGDPLEKATLEAVGWNLEK 556 (1160)
T ss_pred EEEEecccccC----Ccccccchhh----CC-chHHHHHHHHHHHHHh---------cCcccCChHHHHHHHhcCccccc
Confidence 99988753211 0000000000 00 1245677888875432 22478999999999988654322
Q ss_pred hhh------HhhcCCeEEEecCCCCCeeEEEEEEcCC----CeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHH
Q psy6866 538 IQD------VRNTFPKVTEVPFNSLNKFHLTVHFSPL----NKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYEL 607 (961)
Q Consensus 538 ~~~------~~~~~~~~~~~~F~s~~k~~~~v~~~~~----~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~ 607 (961)
.+. .....++.+.+.|+|.-|||+++..... .++++.+|||||.|.++... .+..+
T Consensus 557 ~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY 622 (1160)
T KOG0209|consen 557 KNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--------------VPKDY 622 (1160)
T ss_pred CcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--------------CchhH
Confidence 111 1123566889999999999998876522 36899999999999887653 34467
Q ss_pred HHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcC
Q psy6866 608 EDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTG 687 (961)
Q Consensus 608 ~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TG 687 (961)
++...+|+++|.||+|+++|+++.-...+. ..-.++.+|+||+|.|++.|.-|+|+|++++|+.|++++++++|+||
T Consensus 623 ~~iYk~ytR~GsRVLALg~K~l~~~~~~q~---rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITG 699 (1160)
T KOG0209|consen 623 DEIYKRYTRQGSRVLALGYKPLGDMMVSQV---RDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITG 699 (1160)
T ss_pred HHHHHHHhhccceEEEEecccccccchhhh---hhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeC
Confidence 888999999999999999999873211111 12234558999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCCC--------------------------------------CceeEechhhccCCHH-HHHH
Q psy6866 688 DHPCTAKAIAIKCHILSETSS--------------------------------------DDNVFTGTDLRKITDE-ELKD 728 (961)
Q Consensus 688 D~~~ta~~ia~~~gi~~~~~~--------------------------------------~~~v~~g~~~~~~~~~-~~~~ 728 (961)
||+.||.++|+++||...... .+++++|..+..+... .+.+
T Consensus 700 DnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~ 779 (1160)
T KOG0209|consen 700 DNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRR 779 (1160)
T ss_pred CCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHH
Confidence 999999999999999653100 1445667777665443 4566
Q ss_pred HHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhh----------------
Q psy6866 729 ILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQ---------------- 792 (961)
Q Consensus 729 ~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~---------------- 792 (961)
++.+.. ||||+.|.||..++..|++.|+.++|||||+||++|||+||||||+= ++++.+++
T Consensus 780 l~~hv~--VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~ 856 (1160)
T KOG0209|consen 780 LIPHVW--VFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAK 856 (1160)
T ss_pred hhhhee--EEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCchh
Confidence 666654 99999999999999999999999999999999999999999999985 33221100
Q ss_pred -------------------------------------------------------ccceEeecCCchHHHHHHHHHHHHH
Q psy6866 793 -------------------------------------------------------TADMILMDDNFASIVLGIEEGRLIF 817 (961)
Q Consensus 793 -------------------------------------------------------aad~vl~~~~~~~i~~~i~~gR~~~ 817 (961)
||.+.-.-.+.+++.+.|+.||++.
T Consensus 857 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctL 936 (1160)
T KOG0209|consen 857 QTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTL 936 (1160)
T ss_pred hHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhH
Confidence 2333333345677889999999998
Q ss_pred HHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhh
Q psy6866 818 DNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKL 897 (961)
Q Consensus 818 ~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~ 897 (961)
-+.-+.+.. ++.|.... ......++.-..-++..|.-.--+++. ..-+.+...+|-+.+-+..|. ..++|..+
T Consensus 937 VtTlQMfKI-LALN~Lis-AYslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~----~nIFN~Y~ 1009 (1160)
T KOG0209|consen 937 VTTLQMFKI-LALNCLIS-AYSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL----PNIFNVYI 1009 (1160)
T ss_pred HHHHHHHHH-HHHHHHHH-HHHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC----CCcchHHH
Confidence 887766543 33332221 111122222222345555544444332 234556677787777776664 34566555
Q ss_pred HHHHHHH
Q psy6866 898 VTYAYFH 904 (961)
Q Consensus 898 ~~~~~~~ 904 (961)
+...+.|
T Consensus 1010 i~svl~Q 1016 (1160)
T KOG0209|consen 1010 ILSVLLQ 1016 (1160)
T ss_pred HHHHHHH
Confidence 5544444
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-74 Score=678.00 Aligned_cols=488 Identities=37% Similarity=0.512 Sum_probs=426.0
Q ss_pred HHhhHhHHHHHHHHHHHHHHHHHhc--cCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeecc
Q psy6866 211 TCIVTGMFSFYQERKSSHITESFAK--MIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENS 288 (961)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~--l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS 288 (961)
++++..+++.+++++.++..+.+.+ +.|++++|+|+| +++|++++|+|||+|.|++||+|||||+|++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 3445567788888888888888888 788999999999 999999999999999999999999999999985 689999
Q ss_pred CccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHH-HHH
Q psy6866 289 SLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFM-RLI 367 (961)
Q Consensus 289 ~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~-~~l 367 (961)
+|||||.|+.|.+++. +++|+.+.+|+..+.|+.+|.+|..+++...+......++++++..+++. .++
T Consensus 83 ~LTGEs~pv~k~~g~~----------v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~ 152 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA----------VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIF 152 (499)
T ss_pred cccCCCCCeeeccCCc----------cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 9999999999998865 89999999999999999999999999999998887777899999999998 677
Q ss_pred HHHHHHHHHHHHHHHHHhhc---cHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeE
Q psy6866 368 SMWALTLGAICFLLALYIGY---NWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRT 444 (961)
Q Consensus 368 ~~i~~~~~~i~~i~~~~~~~---~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~ 444 (961)
+++.++++++.+++|..... +|...+.+++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++++
T Consensus 153 ~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~ 232 (499)
T TIGR01494 153 ILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDY 232 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcE
Confidence 77777777777776654433 378899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhH
Q psy6866 445 ICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATE 524 (961)
Q Consensus 445 i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e 524 (961)
+|||||||||+|+|+|++++..+. ...+++|.|
T Consensus 233 i~fDKTGTLT~~~~~v~~~~~~~~-----------------------------------------------~~~s~hp~~ 265 (499)
T TIGR01494 233 ICSDKTGTLTKNEMSFKKVSVLGG-----------------------------------------------EYLSGHPDE 265 (499)
T ss_pred EEeeCCCccccCceEEEEEEecCC-----------------------------------------------CcCCCChHH
Confidence 999999999999999998864320 023467888
Q ss_pred HHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHH
Q psy6866 525 VGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKK 604 (961)
Q Consensus 525 ~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~ 604 (961)
.|+++++... .+...||++.++++++++..+++ .++||+++.+.+.|..
T Consensus 266 ~ai~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~---------------- 314 (499)
T TIGR01494 266 RALVKSAKWK------------ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD---------------- 314 (499)
T ss_pred HHHHHHhhhc------------CcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH----------------
Confidence 8998887531 23467999999888777765333 4689999999998852
Q ss_pred HHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEE
Q psy6866 605 YELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIM 684 (961)
Q Consensus 605 ~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m 684 (961)
+.+..+.++.+|+|++++|++ .+++|+++++|++|++++++|+.|+++|++++|
T Consensus 315 --~~~~~~~~~~~g~~~~~~a~~------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ 368 (499)
T TIGR01494 315 --LEEKVKELAQSGLRVLAVASK------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIM 368 (499)
T ss_pred --HHHHHHHHHhCCCEEEEEEEC------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEE
Confidence 122344577899999999942 179999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEc
Q psy6866 685 VTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTG 764 (961)
Q Consensus 685 ~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vG 764 (961)
+|||+..+|..+|+++|+ +++++|++|.++|+.+|+.|+.|+|+|
T Consensus 369 ltGD~~~~a~~ia~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vG 413 (499)
T TIGR01494 369 LTGDNVLTAKAIAKELGI-----------------------------------FARVTPEEKAALVEALQKKGRVVAMTG 413 (499)
T ss_pred EcCCCHHHHHHHHHHcCc-----------------------------------eeccCHHHHHHHHHHHHHCCCEEEEEC
Confidence 999999999999999986 588999999999999999999999999
Q ss_pred CCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHh
Q psy6866 765 DGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFL 844 (961)
Q Consensus 765 DG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~ 844 (961)
||.||+|||++|||||+|| ++++||++++++++..+..++.+||+++.++++++.|.+++|+..+...+++.+
T Consensus 414 Dg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~- 486 (499)
T TIGR01494 414 DGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV- 486 (499)
T ss_pred CChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999997 689999999999999999999999999999999999999999997655443221
Q ss_pred cCCchhHHHHHHHHHHhhhhhhHhh
Q psy6866 845 GIPLPVSTVTVLCIDLGTDMWPAVS 869 (961)
Q Consensus 845 ~~~~pl~~~q~l~i~li~d~~~~la 869 (961)
+|+++++.++++
T Consensus 487 -------------~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 -------------LNLVPPGLAALA 498 (499)
T ss_pred -------------HHHHhcchhhhc
Confidence 777777776654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-73 Score=674.67 Aligned_cols=508 Identities=27% Similarity=0.377 Sum_probs=426.0
Q ss_pred hhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECC-eEEEEECCCcccceEEEecCCCeeeccEEEEee
Q psy6866 202 LWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNG-SVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEI 280 (961)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G-~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g 280 (961)
|..+..++++++++.++++++++|+++.++++.++.|..++|+|+| ++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g 97 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISG 97 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEec
Confidence 4456777788888889999999999999999999999999999995 999999999999999999999999999999998
Q ss_pred CCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHH
Q psy6866 281 QDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEV 360 (961)
Q Consensus 281 ~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~ 360 (961)
+ +.||||+|||||.|+.|.+|+. +|+||.+.+|.++++|++||.+|.+|++.+++.....+++|+++.+
T Consensus 98 ~-~~vdes~lTGEs~pv~k~~g~~----------v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~ 166 (556)
T TIGR01525 98 E-SEVDESALTGESMPVEKKEGDE----------VFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLA 166 (556)
T ss_pred c-eEEeehhccCCCCCEecCCcCE----------EeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHH
Confidence 7 5899999999999999998864 9999999999999999999999999999999988888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhcc
Q psy6866 361 QHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLG 440 (961)
Q Consensus 361 ~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg 440 (961)
++++.++++++++++++.+++|++.+.+ ..+.+++++++++|||+||+++++++..+.++|+++|+++|+++++|.||
T Consensus 167 ~~~a~~~~~~~l~~a~~~~~~~~~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~ 244 (556)
T TIGR01525 167 DRIASYYVPAVLAIALLTFVVWLALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLA 244 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhh
Confidence 9999999999988888888887665443 78889999999999999999999999999999999999999999999999
Q ss_pred ceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccC
Q psy6866 441 SIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASG 520 (961)
Q Consensus 441 ~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g 520 (961)
++|++|||||||||+|+|+|.+++..+... ...++++..++.+.. ...
T Consensus 245 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~----------------~~~~~~l~~a~~~e~----------------~~~ 292 (556)
T TIGR01525 245 KVKTVVFDKTGTLTTGKPTVVDVEPLDDAS----------------ISEEELLALAAALEQ----------------SSS 292 (556)
T ss_pred cCCEEEEeCCCCCcCCceEEEEEEecCCCC----------------ccHHHHHHHHHHHhc----------------cCC
Confidence 999999999999999999999886533210 001234444433321 234
Q ss_pred ChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccC
Q psy6866 521 DATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLT 600 (961)
Q Consensus 521 ~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~ 600 (961)
+|.+.|+++++...+.+... .+ ....+| +..+..+++|+++..+..|+.... ++.. .
T Consensus 293 hp~~~Ai~~~~~~~~~~~~~---~~-~~~~~~---------------~~gi~~~~~g~~~~~lg~~~~~~~-~~~~--~- 349 (556)
T TIGR01525 293 HPLARAIVRYAKKRGLELPK---QE-DVEEVP---------------GKGVEATVDGQEEVRIGNPRLLEL-AAEP--I- 349 (556)
T ss_pred ChHHHHHHHHHHhcCCCccc---cc-CeeEec---------------CCeEEEEECCeeEEEEecHHHHhh-cCCC--c-
Confidence 68889999998754322110 00 111111 112233344444444334432210 1111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC-
Q psy6866 601 AEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG- 679 (961)
Q Consensus 601 ~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag- 679 (961)
....+.++.++.+|+|++.++ .|.+++|.+.++|++||+++++|+.|+++|
T Consensus 350 ----~~~~~~~~~~~~~g~~~~~v~------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~ 401 (556)
T TIGR01525 350 ----SASPDLLNEGESQGKTVVFVA------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGG 401 (556)
T ss_pred ----hhhHHHHHHHhhCCcEEEEEE------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCC
Confidence 112344567788999999887 235899999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCE
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI 759 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~ 759 (961)
++++|+|||+..++..+++++|+.. +|+++.|++|.++++.+++.++.
T Consensus 402 i~v~ivTgd~~~~a~~i~~~lgi~~--------------------------------~f~~~~p~~K~~~v~~l~~~~~~ 449 (556)
T TIGR01525 402 IKLVMLTGDNRSAAEAVAAELGIDE--------------------------------VHAELLPEDKLAIVKELQEEGGV 449 (556)
T ss_pred CeEEEEeCCCHHHHHHHHHHhCCCe--------------------------------eeccCCHHHHHHHHHHHHHcCCE
Confidence 9999999999999999999999943 89999999999999999999999
Q ss_pred EEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHH
Q psy6866 760 VAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPF 838 (961)
Q Consensus 760 V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~ 838 (961)
|+|+|||.||++|+++||+|++|| ++++.+++.||+++.+++++.+.+++++||+++.|+++++.|++++|++.+...
T Consensus 450 v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a 527 (556)
T TIGR01525 450 VAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLA 527 (556)
T ss_pred EEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 899999999999999999999999999999999999999999999998887543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-72 Score=662.42 Aligned_cols=487 Identities=27% Similarity=0.378 Sum_probs=413.3
Q ss_pred hhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeC
Q psy6866 202 LWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ 281 (961)
Q Consensus 202 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~ 281 (961)
|+.+.+++++++++.+++.++++|+++.++++.++.|++++|+|||+++++++++|+|||+|.|++||+|||||+|++|+
T Consensus 18 ~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~ 97 (536)
T TIGR01512 18 YLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGT 97 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCc
Confidence 45566677777888899999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHH
Q psy6866 282 DLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQ 361 (961)
Q Consensus 282 ~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~ 361 (961)
. .||||+|||||.|+.|++|+. +|+||.+.+|.++++|++||.+|.+|++.+++.....+++|+++.++
T Consensus 98 ~-~vdes~lTGEs~pv~k~~g~~----------v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~ 166 (536)
T TIGR01512 98 S-TVDESALTGESVPVEKAPGDE----------VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFID 166 (536)
T ss_pred E-EEEecccCCCCCcEEeCCCCE----------EEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHH
Confidence 4 899999999999999998864 99999999999999999999999999999999888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccc
Q psy6866 362 HFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGS 441 (961)
Q Consensus 362 ~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~ 441 (961)
+++.++++++++++++.++++++.+. +...+.+++++++++|||+||+++++++..+..+|+++|+++|+++++|++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~ 245 (536)
T TIGR01512 167 RFARYYTPVVLAIALAIWLVPGLLKR-WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAK 245 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcC
Confidence 99999999988888887777765433 33477888999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCC
Q psy6866 442 IRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGD 521 (961)
Q Consensus 442 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~ 521 (961)
+|++|||||||||+|+|+|.+++.. +++..++.+. ....+
T Consensus 246 v~~i~fDKTGTLT~~~~~v~~~~~~------------------------~~l~~a~~~e----------------~~~~h 285 (536)
T TIGR01512 246 IKTVAFDKTGTLTTGRPKVVDVVPA------------------------EVLRLAAAAE----------------QASSH 285 (536)
T ss_pred CCEEEECCCCCCcCCceEEEEeeHH------------------------HHHHHHHHHh----------------ccCCC
Confidence 9999999999999999999887421 2444444321 11345
Q ss_pred hhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCH
Q psy6866 522 ATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTA 601 (961)
Q Consensus 522 ~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~ 601 (961)
|.+.|+++++.... .+.....+|. +... .. -+|.. +..|+++.+.+. +
T Consensus 286 p~~~Ai~~~~~~~~--------~~~~~~~~~g---~gi~-~~---~~g~~--~~ig~~~~~~~~--------~------- 333 (536)
T TIGR01512 286 PLARAIVDYARKRE--------NVESVEEVPG---EGVR-AV---VDGGE--VRIGNPRSLEAA--------V------- 333 (536)
T ss_pred cHHHHHHHHHHhcC--------CCcceEEecC---CeEE-EE---ECCeE--EEEcCHHHHhhc--------C-------
Confidence 77889988876431 1122223332 1111 11 12222 234776544221 0
Q ss_pred HHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCC-
Q psy6866 602 EKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGI- 680 (961)
Q Consensus 602 ~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi- 680 (961)
...+..+|.+++.++ .|.+++|.+.++|++||+++++|+.|+++|+
T Consensus 334 ---------~~~~~~~~~~~~~v~------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~ 380 (536)
T TIGR01512 334 ---------GARPESAGKTIVHVA------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIE 380 (536)
T ss_pred ---------CcchhhCCCeEEEEE------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCC
Confidence 003445676665554 3568999999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEE
Q psy6866 681 RVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIV 760 (961)
Q Consensus 681 ~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V 760 (961)
+++|+|||+..++..+++++|+.. +|++..|++|..+++.+++.++.|
T Consensus 381 ~v~vvTgd~~~~a~~i~~~lgi~~--------------------------------~f~~~~p~~K~~~i~~l~~~~~~v 428 (536)
T TIGR01512 381 KVVMLTGDRRAVAERVARELGIDE--------------------------------VHAELLPEDKLEIVKELREKYGPV 428 (536)
T ss_pred cEEEEcCCCHHHHHHHHHHcCChh--------------------------------hhhccCcHHHHHHHHHHHhcCCEE
Confidence 999999999999999999999954 789999999999999999999999
Q ss_pred EEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 761 AVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 761 ~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
+|+|||.||++|+++||+||+||.++++.++++||+++.++++..+.+++.+||++++|+++++.|++.+|++.+..
T Consensus 429 ~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 429 AMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred EEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999668999999999999999999999999999999999999999999999877654
|
. |
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-73 Score=651.43 Aligned_cols=552 Identities=24% Similarity=0.334 Sum_probs=439.1
Q ss_pred chhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCe-EEEEECCCcccceEEEecCCCeeeccEEEE
Q psy6866 200 DNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGS-VKEIDSAGLVRGDIVLLKIGDKVPADIRLI 278 (961)
Q Consensus 200 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~-~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill 278 (961)
+++-....++.++.+.-+++-..+.|+...+..|.++.|..+.++.+|+ +++|+.+.|++||+|.|.||++||+||+++
T Consensus 339 tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv 418 (951)
T KOG0207|consen 339 TFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV 418 (951)
T ss_pred hhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE
Confidence 3444444555555666677777777888889999999999999999997 889999999999999999999999999999
Q ss_pred eeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHH
Q psy6866 279 EIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQ 358 (961)
Q Consensus 279 ~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~ 358 (961)
+|++ .||||++|||++||.|++|+. +.+||...+|.....++.+|.+|.+++|.+++++++..++|+|+
T Consensus 419 ~Gss-~VDEs~iTGEs~PV~Kk~gs~----------ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq 487 (951)
T KOG0207|consen 419 DGSS-EVDESLITGESMPVPKKKGST----------VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQ 487 (951)
T ss_pred eCce-eechhhccCCceecccCCCCe----------eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHH
Confidence 9986 899999999999999999986 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------cHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhccc
Q psy6866 359 EVQHFMRLISMWALTLGAICFLLALYIGY-----------NWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKN 427 (961)
Q Consensus 359 ~~~~~~~~l~~i~~~~~~i~~i~~~~~~~-----------~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ 427 (961)
.+|+++.+++++++++++..|++|.+.+. .+...+.+++++++++|||+|.++.|++...+....+++|
T Consensus 488 ~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nG 567 (951)
T KOG0207|consen 488 LADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNG 567 (951)
T ss_pred HHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcc
Confidence 99999999999999999999999987653 2345667889999999999999999999999999999999
Q ss_pred ccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCC
Q psy6866 428 CIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPN 507 (961)
Q Consensus 428 ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~ 507 (961)
+|+|..+.+|.+.++++++||||||||+|+++|+++....+. -..++++...+....
T Consensus 568 vLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~-----------------~~~~e~l~~v~a~Es------ 624 (951)
T KOG0207|consen 568 VLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP-----------------ISLKEALALVAAMES------ 624 (951)
T ss_pred eEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc-----------------ccHHHHHHHHHHHhc------
Confidence 999999999999999999999999999999999988654321 112233333322211
Q ss_pred CCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhh
Q psy6866 508 QDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCT 587 (961)
Q Consensus 508 ~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~ 587 (961)
...|| .-.|+++|+........ .-.....-.|..+... ..+.. .+.+ .+-|.-+.+..
T Consensus 625 ~SeHP----------ig~AIv~yak~~~~~~~----~~~~~~~~~~pg~g~~-~~~~~-~~~~---i~iGN~~~~~r--- 682 (951)
T KOG0207|consen 625 GSEHP----------IGKAIVDYAKEKLVEPN----PEGVLSFEYFPGEGIY-VTVTV-DGNE---VLIGNKEWMSR--- 682 (951)
T ss_pred CCcCc----------hHHHHHHHHHhcccccC----ccccceeecccCCCcc-cceEE-eeeE---EeechHHHHHh---
Confidence 11234 44589999875431100 0001111122222211 11111 1111 34477666543
Q ss_pred cccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCC
Q psy6866 588 TMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA 667 (961)
Q Consensus 588 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 667 (961)
+|... .+.+++.++.....|..+..++ .|.+++|++.++|++|+|
T Consensus 683 -----~~~~~------~~~i~~~~~~~e~~g~tvv~v~------------------------vn~~l~gv~~l~D~vr~~ 727 (951)
T KOG0207|consen 683 -----NGCSI------PDDILDALTESERKGQTVVYVA------------------------VNGQLVGVFALEDQVRPD 727 (951)
T ss_pred -----cCCCC------chhHHHhhhhHhhcCceEEEEE------------------------ECCEEEEEEEeccccchh
Confidence 22221 1235666777778899888887 345899999999999999
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHH
Q psy6866 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKL 747 (961)
Q Consensus 668 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~ 747 (961)
+..+|+.||+.|++++|+||||..+|+++|+++|+.. |||...|+||.
T Consensus 728 a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~--------------------------------V~aev~P~~K~ 775 (951)
T KOG0207|consen 728 AALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN--------------------------------VYAEVLPEQKA 775 (951)
T ss_pred HHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce--------------------------------EEeccCchhhH
Confidence 9999999999999999999999999999999999643 99999999999
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYI 827 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~ 827 (961)
++|+.+|+++..|+|||||+||+|||.+|||||+|| .|+++|.++||+||+.+|+..++.+++.+|++..|||.|+.|.
T Consensus 776 ~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A 854 (951)
T KOG0207|consen 776 EKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWA 854 (951)
T ss_pred HHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HhhhHhhHHHHHHHHHhcCC---chhHHHHHHHHHHhhhhhhHhhhc-ccCCC
Q psy6866 828 LASNIPEILPFLFYIFLGIP---LPVSTVTVLCIDLGTDMWPAVSLA-YEKPE 876 (961)
Q Consensus 828 l~~ni~~i~~~~~~~~~~~~---~pl~~~q~l~i~li~d~~~~lal~-~e~~~ 876 (961)
++||++.+.+ ....|+.++ .|.-+...+..+-+.-.+-++-|- +.+|.
T Consensus 855 ~~yn~~~IpI-AagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 855 LIYNLVGIPI-AAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPT 906 (951)
T ss_pred HHHHHhhhhh-heecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccc
Confidence 9999988643 233344433 333333333444444444455554 34454
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-70 Score=678.90 Aligned_cols=501 Identities=26% Similarity=0.322 Sum_probs=422.4
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCce
Q psy6866 205 GIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLK 284 (961)
Q Consensus 205 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~ 284 (961)
+..+++++.+..+++.+.+.|+++.+++|.++.|++++++|+|++++|+.++|+|||+|.|++||+|||||+|++|+ ..
T Consensus 289 ~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~ 367 (834)
T PRK10671 289 SAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AW 367 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EE
Confidence 55666677777788888888999999999999999999999999999999999999999999999999999999986 58
Q ss_pred eeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHH
Q psy6866 285 AENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFM 364 (961)
Q Consensus 285 vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~ 364 (961)
||||+|||||.|+.|.+|+. +|+||.+.+|.+.+.|+++|.+|.+|+|.+++++.+..++|+++.+++++
T Consensus 368 vdeS~lTGEs~pv~k~~gd~----------V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a 437 (834)
T PRK10671 368 LDEAMLTGEPIPQQKGEGDS----------VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKIS 437 (834)
T ss_pred EeehhhcCCCCCEecCCCCE----------EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 99999999999999999975 99999999999999999999999999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc--HHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccce
Q psy6866 365 RLISMWALTLGAICFLLALYIGYN--WLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSI 442 (961)
Q Consensus 365 ~~l~~i~~~~~~i~~i~~~~~~~~--~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v 442 (961)
.++++++++++++.+++|++.+.. |...+.+++++++++|||+|++++++++..+..+++++|+++|+++++|+||++
T Consensus 438 ~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v 517 (834)
T PRK10671 438 AVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTL 517 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCC
Confidence 999999888888888888665433 566788899999999999999999999999999999999999999999999999
Q ss_pred eEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCCh
Q psy6866 443 RTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522 (961)
Q Consensus 443 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~ 522 (961)
|++|||||||||+|+|+|.++...+.. ...+.+..+++++.. +.+|
T Consensus 518 ~~v~fDKTGTLT~g~~~v~~~~~~~~~-----------------~~~~~l~~a~~~e~~-----------------s~hp 563 (834)
T PRK10671 518 DTLVFDKTGTLTEGKPQVVAVKTFNGV-----------------DEAQALRLAAALEQG-----------------SSHP 563 (834)
T ss_pred CEEEEcCCCccccCceEEEEEEccCCC-----------------CHHHHHHHHHHHhCC-----------------CCCH
Confidence 999999999999999999887532210 011122233334321 2356
Q ss_pred hHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHH
Q psy6866 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAE 602 (961)
Q Consensus 523 ~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~ 602 (961)
.+.|+++++... .. .. ..+|......-.... .+|. .+.+|+++.+.+.. +.
T Consensus 564 ~a~Ai~~~~~~~--~~-------~~--~~~~~~~~g~Gv~~~--~~g~--~~~~G~~~~~~~~~------------~~-- 614 (834)
T PRK10671 564 LARAILDKAGDM--TL-------PQ--VNGFRTLRGLGVSGE--AEGH--ALLLGNQALLNEQQ------------VD-- 614 (834)
T ss_pred HHHHHHHHHhhC--CC-------CC--cccceEecceEEEEE--ECCE--EEEEeCHHHHHHcC------------CC--
Confidence 777888776421 10 00 112221111111111 1232 34569998764311 11
Q ss_pred HHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEE
Q psy6866 603 KKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRV 682 (961)
Q Consensus 603 ~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v 682 (961)
+..+.+.++.+..+|.+++.+++ |.+++|++.+.|++||+++++|+.|++.|+++
T Consensus 615 -~~~~~~~~~~~~~~g~~~v~va~------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v 669 (834)
T PRK10671 615 -TKALEAEITAQASQGATPVLLAV------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRL 669 (834)
T ss_pred -hHHHHHHHHHHHhCCCeEEEEEE------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeE
Confidence 12345556778889999988873 34789999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEE
Q psy6866 683 IMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAV 762 (961)
Q Consensus 683 ~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~ 762 (961)
+|+|||+..++..+++++||.. +|++..|++|.++++.++.+++.|+|
T Consensus 670 ~~~Tgd~~~~a~~ia~~lgi~~--------------------------------~~~~~~p~~K~~~i~~l~~~~~~v~~ 717 (834)
T PRK10671 670 VMLTGDNPTTANAIAKEAGIDE--------------------------------VIAGVLPDGKAEAIKRLQSQGRQVAM 717 (834)
T ss_pred EEEcCCCHHHHHHHHHHcCCCE--------------------------------EEeCCCHHHHHHHHHHHhhcCCEEEE
Confidence 9999999999999999999953 89999999999999999999999999
Q ss_pred EcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 763 TGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 763 vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
+|||.||++|+++||+||+|| +|++.++++||++++++++.+|..++++||+++.+|++|+.|.+.+|++.+..
T Consensus 718 vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~ 791 (834)
T PRK10671 718 VGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPI 791 (834)
T ss_pred EeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999999999999999888643
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-70 Score=649.39 Aligned_cols=492 Identities=25% Similarity=0.352 Sum_probs=408.9
Q ss_pred hhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEEC-CeEEEEECCCcccceEEEecCCCeeeccEEEEe
Q psy6866 201 NLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRN-GSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIE 279 (961)
Q Consensus 201 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~-G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~ 279 (961)
++..+.++++++.++.+++.+.++|+++.+++|.++.|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3344445566666677888888889999999999999999999985 667999999999999999999999999999999
Q ss_pred eCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHH
Q psy6866 280 IQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQE 359 (961)
Q Consensus 280 g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~ 359 (961)
|+. .||||+|||||.|+.|.+|+. +|+||.+.+|.+.++|+++|.+|.+|+|.+++.+.+.+++|+++.
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~----------V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~ 201 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDP----------VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRL 201 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCE----------EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHH
Confidence 875 899999999999999999875 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhc
Q psy6866 360 VQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETL 439 (961)
Q Consensus 360 ~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~l 439 (961)
+++++.++++++++++++.+++|. ..+.+++++++++|||+|++++++++..+..+++++|+++|+++++|.|
T Consensus 202 ~d~~a~~~~~~v~~~a~~~~~~~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l 274 (562)
T TIGR01511 202 ADKVAGYFVPVVIAIALITFVIWL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERA 274 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHh
Confidence 999999999988888877776553 4788899999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCccccccccc
Q psy6866 440 GSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKAS 519 (961)
Q Consensus 440 g~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~ 519 (961)
+++|++|||||||||+|+|+|.++...+.. ..++++..++.... .+
T Consensus 275 ~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------------------~~~~~l~~aa~~e~----------------~s 320 (562)
T TIGR01511 275 ANIDTVVFDKTGTLTQGKPTVTDVHVFGDR------------------DRTELLALAAALEA----------------GS 320 (562)
T ss_pred hCCCEEEECCCCCCcCCCEEEEEEecCCCC------------------CHHHHHHHHHHHhc----------------cC
Confidence 999999999999999999999988643211 01234444332211 12
Q ss_pred CChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCccccc
Q psy6866 520 GDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFL 599 (961)
Q Consensus 520 g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l 599 (961)
.+|.+.|+++++...+.... .......+|- +.... . -++ .-+..|+++.+.+. +.. +
T Consensus 321 ~HPia~Ai~~~~~~~~~~~~----~~~~~~~~~g---~Gi~~-~---~~g--~~~~iG~~~~~~~~--------~~~--~ 377 (562)
T TIGR01511 321 EHPLAKAIVSYAKEKGITLV----EVSDFKAIPG---IGVEG-T---VEG--TKIQLGNEKLLGEN--------AIK--I 377 (562)
T ss_pred CChHHHHHHHHHHhcCCCcC----CCCCeEEECC---ceEEE-E---ECC--EEEEEECHHHHHhC--------CCC--C
Confidence 34677799888764322111 0111222221 11111 1 122 22456888765321 110 1
Q ss_pred CHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcC
Q psy6866 600 TAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAG 679 (961)
Q Consensus 600 ~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ag 679 (961)
+ .+..+|.+++.++ .|.+++|++.++|++||+++++|++|++.|
T Consensus 378 ~------------~~~~~g~~~~~~~------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~G 421 (562)
T TIGR01511 378 D------------GKAEQGSTSVLVA------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRG 421 (562)
T ss_pred C------------hhhhCCCEEEEEE------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcC
Confidence 1 1235788877765 456899999999999999999999999999
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCE
Q psy6866 680 IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI 759 (961)
Q Consensus 680 i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~ 759 (961)
++++|+|||+..++..+++++|+. +|++..|++|.++++.+++.++.
T Consensus 422 i~v~ilSgd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K~~~v~~l~~~~~~ 468 (562)
T TIGR01511 422 IEPVMLTGDNRKTAKAVAKELGIN---------------------------------VRAEVLPDDKAALIKELQEKGRV 468 (562)
T ss_pred CeEEEEcCCCHHHHHHHHHHcCCc---------------------------------EEccCChHHHHHHHHHHHHcCCE
Confidence 999999999999999999999992 68899999999999999999999
Q ss_pred EEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 760 VAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 760 V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
|+|+|||.||++|+++||+||+|| .|++.++++||+++.++++..+..++++||+++++|++++.|++.+|++.+..
T Consensus 469 v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~l 545 (562)
T TIGR01511 469 VAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPI 545 (562)
T ss_pred EEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 89999999999999999999999999999999999999999999999987643
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-60 Score=507.57 Aligned_cols=495 Identities=26% Similarity=0.357 Sum_probs=383.3
Q ss_pred HHHHHhhHhHHHHHHHHHHHHHHHHHhccC-CCeeEEEEC-CeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCcee
Q psy6866 208 LALTCIVTGMFSFYQERKSSHITESFAKMI-PTRATVIRN-GSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKA 285 (961)
Q Consensus 208 i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~V~R~-G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~v 285 (961)
+.+.+++..+-+.+.|-|.+...+.|++.. ...++++++ |.++.+++.+|..||+|.|+.||.||+||.+++|.. .|
T Consensus 72 L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sV 150 (681)
T COG2216 72 LWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150 (681)
T ss_pred HHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ec
Confidence 444444445556666666555555665543 235667765 899999999999999999999999999999999986 89
Q ss_pred eccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHH
Q psy6866 286 ENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMR 365 (961)
Q Consensus 286 deS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~ 365 (961)
|||.+||||-||.|.+|.... -+--||.+++.+.+..+++.-.+|.+.|+..+++.+..++||-+-.+.-+..
T Consensus 151 dESAITGESaPViresGgD~s-------sVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~ 223 (681)
T COG2216 151 DESAITGESAPVIRESGGDFS-------SVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLS 223 (681)
T ss_pred chhhccCCCcceeeccCCCcc-------cccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHH
Confidence 999999999999999884321 2678999999999999999999999999999999999999998877766655
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccceeEE
Q psy6866 366 LISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTI 445 (961)
Q Consensus 366 ~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v~~i 445 (961)
-+.++.+++....+-+..+.+ .-...+...++++++.+|-....-++..=..++.|+.+.|++-++..++|.+|.+|++
T Consensus 224 ~LTliFL~~~~Tl~p~a~y~~-g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtl 302 (681)
T COG2216 224 GLTLIFLLAVATLYPFAIYSG-GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTL 302 (681)
T ss_pred HHHHHHHHHHHhhhhHHHHcC-CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEE
Confidence 554443332222222222221 1113345667889999998887666666666999999999999999999999999999
Q ss_pred EecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHH
Q psy6866 446 CTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEV 525 (961)
Q Consensus 446 ~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~ 525 (961)
..|||||+|-|+=.-.+++..+ ..+.+++..++.+++-+.-.++ -.
T Consensus 303 iLDKTGTIT~GnR~A~~f~p~~------------------gv~~~~la~aa~lsSl~DeTpE----------------Gr 348 (681)
T COG2216 303 LLDKTGTITLGNRQASEFIPVP------------------GVSEEELADAAQLASLADETPE----------------GR 348 (681)
T ss_pred EecccCceeecchhhhheecCC------------------CCCHHHHHHHHHHhhhccCCCC----------------cc
Confidence 9999999998865444433221 1233557777777654321111 12
Q ss_pred HHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHH
Q psy6866 526 GILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKY 605 (961)
Q Consensus 526 all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~ 605 (961)
+++..+++.+...+..... .....+||+.+.+++.+-. +++ .-+-|||.+.|.++.+. .+.. .+.
T Consensus 349 SIV~LA~~~~~~~~~~~~~-~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~----~~g~------~p~ 413 (681)
T COG2216 349 SIVELAKKLGIELREDDLQ-SHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRE----RGGH------IPE 413 (681)
T ss_pred cHHHHHHHhccCCCccccc-ccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHh----cCCC------CCH
Confidence 4555555443222211110 1346789998887654433 223 55679999999887652 2221 234
Q ss_pred HHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEE
Q psy6866 606 ELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMV 685 (961)
Q Consensus 606 ~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~ 685 (961)
.++...++.++.|-..++++ .|-+++|++.++|-+||+.+|-+++||+.||+++|+
T Consensus 414 ~l~~~~~~vs~~GGTPL~V~------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~ 469 (681)
T COG2216 414 DLDAAVDEVSRLGGTPLVVV------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMI 469 (681)
T ss_pred HHHHHHHHHHhcCCCceEEE------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEE
Confidence 56777888899999998887 345899999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcC
Q psy6866 686 TGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGD 765 (961)
Q Consensus 686 TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGD 765 (961)
||||+.||..||++.|++. ..|.++|++|.++|+.-|..|+.|+||||
T Consensus 470 TGDN~~TAa~IA~EAGVDd--------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 470 TGDNPLTAAAIAAEAGVDD--------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred eCCCHHHHHHHHHHhCchh--------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 9999999999999999965 78999999999999999999999999999
Q ss_pred CCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHH
Q psy6866 766 GVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIF 817 (961)
Q Consensus 766 G~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~ 817 (961)
|+||+|||.+||||+||. +|++.|||++++|=+|.|...+.+.++.|+...
T Consensus 518 GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 518 GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999998 999999999999999999999999999998763
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=313.55 Aligned_cols=226 Identities=32% Similarity=0.576 Sum_probs=201.6
Q ss_pred HHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCe-eEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceee
Q psy6866 208 LALTCIVTGMFSFYQERKSSHITESFAKMIPTR-ATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAE 286 (961)
Q Consensus 208 i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vd 286 (961)
++++++++.++++++++++++..++++++.+++ ++|+|||++++++++||+|||||.|++||.+||||+|++.+.+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 445666677889999999999999999988887 9999999999999999999999999999999999999995567999
Q ss_pred ccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHHHHH
Q psy6866 287 NSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRL 366 (961)
Q Consensus 287 eS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~~~~ 366 (961)
||.+|||+.|+.|.+. +.+.+|++|+||.+.+|++.++|++||.+|..|++.+.....+.+++++++.++++..+
T Consensus 82 ~s~ltGes~pv~k~~~-----~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (230)
T PF00122_consen 82 ESALTGESEPVKKTPL-----PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKI 156 (230)
T ss_dssp CHHHHSBSSEEEESSS-----CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHH
T ss_pred cccccccccccccccc-----cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHH
Confidence 9999999999999855 45567889999999999999999999999999999998888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--hhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhh
Q psy6866 367 ISMWALTLGAICFLLALY--IGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVET 438 (961)
Q Consensus 367 l~~i~~~~~~i~~i~~~~--~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~ 438 (961)
+.++++++++++++++++ ...+|...+..++++++++||++||+++++++.+++++|.++|+++|+++++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 157 LIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred HHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 998888888887777666 567788999999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.9e-22 Score=208.85 Aligned_cols=97 Identities=46% Similarity=0.692 Sum_probs=91.3
Q ss_pred CceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHH
Q psy6866 651 GFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDIL 730 (961)
Q Consensus 651 ~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~ 730 (961)
+++++|.+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 569999999999999999999999999999999999999999999999999943
Q ss_pred HhcCceEEeec--CHHHH--HHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC
Q psy6866 731 ETNKELVFART--SPLQK--LRIVELYQSLDEIVAVTGDGVNDAPALKKAD 777 (961)
Q Consensus 731 ~~~~~~v~ar~--~p~~K--~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad 777 (961)
..+|+++ +|++| .++++.|+..++.|+|+|||.||++|+++||
T Consensus 169 ----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 ----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 2499999 99999 9999999976779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG4383|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.5e-17 Score=178.43 Aligned_cols=303 Identities=19% Similarity=0.218 Sum_probs=210.7
Q ss_pred CChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCC--------C--CC---C--------
Q psy6866 577 GAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQ--------N--NF---P-------- 635 (961)
Q Consensus 577 Ga~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~--------~--~~---~-------- 635 (961)
|-.+.+.+.|+.+++ +....|++...+.++.+.+.+-...|+ ++++|||+.-. + +. +
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 555678889999887 667789999899888888888777776 68899886210 0 00 0
Q ss_pred ----CCc--------cCCCC-----------CCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHH
Q psy6866 636 ----VNF--------KFSTD-----------PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCT 692 (961)
Q Consensus 636 ----~~~--------~~~~~-----------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~t 692 (961)
... .++.. +....-++..|.|++.+..+.+++....|+.|-++-|+.+..|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000 00000 0011225678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCcee---------------------------------EechhhccCCHHH--------------
Q psy6866 693 AKAIAIKCHILSETSSDDNV---------------------------------FTGTDLRKITDEE-------------- 725 (961)
Q Consensus 693 a~~ia~~~gi~~~~~~~~~v---------------------------------~~g~~~~~~~~~~-------------- 725 (961)
.+-.|.++||...++++.-. .+..+..-++.++
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998877662100 0000000000000
Q ss_pred ----------------HHHHHHhcCc--------eEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCH--hhhhhCCee
Q psy6866 726 ----------------LKDILETNKE--------LVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDA--PALKKADIG 779 (961)
Q Consensus 726 ----------------~~~~~~~~~~--------~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~--~al~~AdvG 779 (961)
+.++-.+.++ -.|..++|+.-.++|+.+|++|++++++|...|-- ..+-+||++
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 0011011000 16999999999999999999999999999999843 356789999
Q ss_pred EeecC------------CccHh-hhh-----------------ccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 780 IAMGI------------TGSEV-SKQ-----------------TADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILA 829 (961)
Q Consensus 780 Iamg~------------~g~~~-a~~-----------------aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~ 829 (961)
||+.. -++.. ..+ ++|+-+.....-++..+|+-+|.....+|+.+.|.+.
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 98831 01111 011 3344444444556788999999999999999999999
Q ss_pred hhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhh-hcccCCCCCccc
Q psy6866 830 SNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVS-LAYEKPESNIMS 881 (961)
Q Consensus 830 ~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~la-l~~e~~~~~~~~ 881 (961)
..+...+.++...++.+|..++..+++|...+-..+-.+. |-..+|...+|.
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~ 1148 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIII 1148 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEE
Confidence 9988888888888888999999999999998875444443 223344444443
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=124.60 Aligned_cols=118 Identities=27% Similarity=0.320 Sum_probs=103.6
Q ss_pred ceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH
Q psy6866 652 FRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE 731 (961)
Q Consensus 652 l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 731 (961)
+...+.++---++=++++++|++|++. +++++.|||...+....|+-.|+..+
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 355677777778889999999999999 99999999999999999999998653
Q ss_pred hcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee-c-CCccHhhhhccceEeec
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM-G-ITGSEVSKQTADMILMD 800 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam-g-~~g~~~a~~aad~vl~~ 800 (961)
.+|+-..|+.|.++++.|+++++.|.|+|||.||.+||+.||+||+. + .+..+-+.++||+++.+
T Consensus 72 ----rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 ----RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred ----eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 38999999999999999999999999999999999999999999975 3 13445567899999874
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.9e-13 Score=120.63 Aligned_cols=88 Identities=38% Similarity=0.608 Sum_probs=72.3
Q ss_pred HHccCceecCCCCCcccccccccCChhHHHHHHhhccc--ccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEE
Q psy6866 497 CLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPR--IKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLL 574 (961)
Q Consensus 497 ~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~--~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~ 574 (961)
++||++.+..+.+... ....|+|+|.||+.|+... +.+....+..+++++++||||+||+|++++. .++.+.++
T Consensus 1 ~LCn~a~~~~~~~~~~---~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~ 76 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKT---EEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILY 76 (91)
T ss_pred CCccccEeecCCCCcc---ccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEE
Confidence 5799888755443211 2378999999999999987 4467788899999999999999999999998 33457779
Q ss_pred EeCChHHHHHHhhc
Q psy6866 575 MKGAPEVIMERCTT 588 (961)
Q Consensus 575 ~KGa~e~Il~~c~~ 588 (961)
+|||||.|+++|++
T Consensus 77 ~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 77 VKGAPEVILDRCTH 90 (91)
T ss_pred cCCChHHHHHhcCC
Confidence 99999999999985
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.9e-12 Score=107.39 Aligned_cols=69 Identities=33% Similarity=0.453 Sum_probs=64.9
Q ss_pred ccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHH
Q psy6866 115 EHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLS 183 (961)
Q Consensus 115 ~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails 183 (961)
||..+.+++++.|+|+...||+.+|+++|+++||+|.++.++++++|+.++++|.++|.++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 688999999999999999999999999999999999999888999999999999999999999998775
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.1e-11 Score=121.23 Aligned_cols=80 Identities=36% Similarity=0.800 Sum_probs=65.8
Q ss_pred CchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy6866 847 PLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGW 926 (961)
Q Consensus 847 ~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 926 (961)
|+|++++|+||+|+++|.+|+++|++|||++++|+||||++ ++++++++++... ...|++++++++++|++.++..|.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~-~~~l~~~~~~~~i-~~~g~~~~~~~~~~f~~~~~~~~~ 78 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDP-NEPLINKRLLRRI-LIQGLIMAAACFFAFFLGLYIFGW 78 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TT-TS-SSSHHHHHHH-CCHHHHHHHHHHHHHHHHHHSTCS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhcccccc-chhhccHHhHhHH-HHHHHHHHHHHHHHHHHHhhcccc
Confidence 78999999999999999999999999999999999999964 7999999998876 667999999999999999886665
Q ss_pred CC
Q psy6866 927 DP 928 (961)
Q Consensus 927 ~~ 928 (961)
..
T Consensus 79 ~~ 80 (182)
T PF00689_consen 79 DE 80 (182)
T ss_dssp SS
T ss_pred cc
Confidence 54
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.7e-10 Score=91.36 Aligned_cols=61 Identities=33% Similarity=0.418 Sum_probs=55.7
Q ss_pred HhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy6866 126 ILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLA 186 (961)
Q Consensus 126 ~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~ 186 (961)
.|++++..||+.+++++|+++||+|.++++++.++|+.++++|++++.++|+++++++++.
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4678888899999999999999999999988899999999999999999999999888643
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-09 Score=117.63 Aligned_cols=67 Identities=25% Similarity=0.313 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|..-++.+.+. | +.|+++|||.||.+||+.|++|+||| ++.+.+|++||+|..+++-+++.++++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 4566666666543 2 45777799999999999999999999 999999999999999999999998876
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.3e-09 Score=113.66 Aligned_cols=148 Identities=22% Similarity=0.291 Sum_probs=104.0
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--C--------------------------------
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--D-------------------------------- 709 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~-------------------------------- 709 (961)
+.+.+.++|+++++.|++++++||+....+..+.+++++...-.. .
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 889999999999999999999999999999999999999642100 0
Q ss_pred -ceeEechh---------------------------hc----------cCCHHHHHHH----HHhcC--ceEEeecCH--
Q psy6866 710 -DNVFTGTD---------------------------LR----------KITDEELKDI----LETNK--ELVFARTSP-- 743 (961)
Q Consensus 710 -~~v~~g~~---------------------------~~----------~~~~~~~~~~----~~~~~--~~v~ar~~p-- 743 (961)
...+...+ .. ....+...++ ..... ...+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 00000000 00 0001111111 11111 122222222
Q ss_pred -------HHHHHHHHHHhh-cC---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 744 -------LQKLRIVELYQS-LD---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 744 -------~~K~~iv~~l~~-~g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
.+|+..++.+.+ .| +.|+++||+.||.+||+.|+.||||| ++.+.+|+.||++...++-+++.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 478888888766 23 24777799999999999999999999 8899999999988899999999988874
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.7e-09 Score=111.57 Aligned_cols=148 Identities=25% Similarity=0.270 Sum_probs=102.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC--CCCceeEe---chhhcc-----------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSET--SSDDNVFT---GTDLRK----------------- 720 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~~~~v~~---g~~~~~----------------- 720 (961)
.+.+.+.++|+++++.|++++++||+....+..+++++|+..+. ...+.++. +..+..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 37788999999999999999999999999999999999985321 00111111 100000
Q ss_pred ------------------------CCHHHHHHHHHhcCc-eE------EeecCH--HHHHHHHHHHhhc----CCEEEEE
Q psy6866 721 ------------------------ITDEELKDILETNKE-LV------FARTSP--LQKLRIVELYQSL----DEIVAVT 763 (961)
Q Consensus 721 ------------------------~~~~~~~~~~~~~~~-~v------~ar~~p--~~K~~iv~~l~~~----g~~V~~v 763 (961)
...+++.+.+..... .. +....| ..|..-++.+.+. .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 001122222221110 00 112222 2477777777543 2457788
Q ss_pred cCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 764 GDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 764 GDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
||+.||.+|++.|++|+||| ++.+.+|+.||+|..+++-+++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999999999999998876
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-09 Score=109.81 Aligned_cols=131 Identities=14% Similarity=0.129 Sum_probs=98.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..--.. ...+.+.. .++. ... ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an-~l~~~~~g--~~tG------------~~~--~~ 129 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDSD--RVVG------------YQL--RQ 129 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce-eeEEecCC--eeEC------------eee--cC
Confidence 68999999999999975 9999999999999999999999532111 11111100 0000 011 35
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~g 813 (961)
+..|...++.+++.+..+.++|||.||.+|++.||+||++. +.+..+++||=.-.-.+++.+..++.++
T Consensus 130 ~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 130 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred cchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 67899999999888877889999999999999999999995 7777777776555555778787777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.5e-09 Score=113.51 Aligned_cols=66 Identities=14% Similarity=0.121 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccce--EeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM--ILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~--vl~~~~~~~i~~~i~ 811 (961)
.|..-++.+.+. | +.|+++|||.||.+||+.|+.||||| ++.+.+|++||. ++.+++-+++..+++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 677777777553 2 35777799999999999999999999 999999999996 777888899988775
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.3e-09 Score=109.95 Aligned_cols=146 Identities=23% Similarity=0.251 Sum_probs=100.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeEechh-hc--cC----------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVFTGTD-LR--KI---------------- 721 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~~g~~-~~--~~---------------- 721 (961)
.+.+.+.++|++|++.|++++++||++...+..+++++++..+... ...++.... +. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4888999999999999999999999999999999999998532100 011111100 00 00
Q ss_pred -------------------CHHHHHHHHHhcCc-eE----Eee--cCHHHHHHHHHHHhhc----CCEEEEEcCCCCCHh
Q psy6866 722 -------------------TDEELKDILETNKE-LV----FAR--TSPLQKLRIVELYQSL----DEIVAVTGDGVNDAP 771 (961)
Q Consensus 722 -------------------~~~~~~~~~~~~~~-~v----~ar--~~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~ 771 (961)
..+.+...+....- .+ +.. ....+|...++.+.+. .+.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00111111111110 01 112 2235888888887653 235888899999999
Q ss_pred hhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 772 ALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 772 al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|++.|++|+||+ ++.+.+|+.||++..+++-+++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999988888888764
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=108.11 Aligned_cols=148 Identities=18% Similarity=0.167 Sum_probs=100.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeEechh-----hccC--------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVFTGTD-----LRKI-------------- 721 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~~g~~-----~~~~-------------- 721 (961)
.+.+.+.++|+++++.|+.++++||++...+..+.+++|+...... ...+..... ...+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778889999999999999999999999999999999995322100 011111000 0000
Q ss_pred ----------------------CHHHHHHHHHhcCceE-------EeecCH--HHHHHHHHHHhhc----CCEEEEEcCC
Q psy6866 722 ----------------------TDEELKDILETNKELV-------FARTSP--LQKLRIVELYQSL----DEIVAVTGDG 766 (961)
Q Consensus 722 ----------------------~~~~~~~~~~~~~~~v-------~ar~~p--~~K~~iv~~l~~~----g~~V~~vGDG 766 (961)
..+....+.......+ +....| ..|...++.+.+. .+.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 1111222222211101 112222 4788888877553 2457888999
Q ss_pred CCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH----HHHHHH
Q psy6866 767 VNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS----IVLGIE 811 (961)
Q Consensus 767 ~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~----i~~~i~ 811 (961)
.||.+|++.|++|+||| ++.+.+|+.||.|..+++-++ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999998888888 655544
|
catalyze the same reaction as SPP. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.9e-09 Score=115.19 Aligned_cols=130 Identities=17% Similarity=0.260 Sum_probs=96.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe-ec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA-RT 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a-r~ 741 (961)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..-......+..|.-.. .+.. -+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg----------------~v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG----------------NVLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe----------------EecCccC
Confidence 689999999999999999999999999888889999999843110000111110000 0110 12
Q ss_pred CHHHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 742 SPLQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
....|.+.++.+.++ | +.+.++|||.||.+|++.|++|||| ++.+..++.||.++...++++++.++
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 335788888877653 2 4677889999999999999999999 68899999999999988999887654
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-08 Score=110.87 Aligned_cols=66 Identities=21% Similarity=0.200 Sum_probs=55.1
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc--eEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD--MILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad--~vl~~~~~~~i~~~i~ 811 (961)
.|..-++.+.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|+.+++-+++.++++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 566666666543 2 45777799999999999999999999 99999999988 7788888899988875
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.5e-08 Score=116.54 Aligned_cols=66 Identities=27% Similarity=0.381 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|+.-++.+.+. | +.|+++|||.||.+||+.|++||||| ||.+.+|++||+|..+++-+++..+++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344444444332 2 34667799999999999999999999 999999999999999999999998876
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.6e-08 Score=99.50 Aligned_cols=104 Identities=16% Similarity=0.181 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec--CHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART--SPLQKL 747 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~--~p~~K~ 747 (961)
..|+.|++.|+++.++|+.+...+..+.+.+|+.. .|... .|+-..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------~f~~~kpkp~~~~ 88 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------FHEGIKKKTEPYA 88 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE--------------------------------EEecCCCCHHHHH
Confidence 47999999999999999999999999999999953 22222 344444
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHH
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASI 806 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i 806 (961)
.+++.+.-..+.++++||+.||.+|++.|++++||+ ++.+.+++.|++|+..++-.+.
T Consensus 89 ~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 89 QMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 444544433456889999999999999999999999 8999999999999876554443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.1e-08 Score=107.22 Aligned_cols=66 Identities=29% Similarity=0.389 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.++ | +.++++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-+++.++++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655432 2 35778899999999999999999999 888989999999999999999998876
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.7e-08 Score=105.80 Aligned_cols=147 Identities=21% Similarity=0.255 Sum_probs=99.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--Cce-----------------------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDN----------------------------- 711 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~----------------------------- 711 (961)
.+.+++.++|++++++|+++++.||+....+..+..++++...... .+.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 5678999999999999999999999999999999999998521000 000
Q ss_pred -----eEechhhcc---------------------------------------CCHHHHHHHH----HhcCce-EEee--
Q psy6866 712 -----VFTGTDLRK---------------------------------------ITDEELKDIL----ETNKEL-VFAR-- 740 (961)
Q Consensus 712 -----v~~g~~~~~---------------------------------------~~~~~~~~~~----~~~~~~-v~ar-- 740 (961)
+.++..+.. ...+++..+. ...... .+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 000000000 0111221111 111110 1222
Q ss_pred -----cC--HHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 741 -----TS--PLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 741 -----~~--p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
.+ ...|...++.+.+. .+.++++||+.||.+||+.|+.|+||+ ++++..++.||+++...+-++++++
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 22 26888888888642 245677799999999999999999999 9999999999999998777898876
Q ss_pred H
Q psy6866 810 I 810 (961)
Q Consensus 810 i 810 (961)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.4e-08 Score=103.32 Aligned_cols=128 Identities=20% Similarity=0.266 Sum_probs=92.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee-c
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-T 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-~ 741 (961)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..-... .....+..+.. .+... .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~-~~~~~~~~~~~---------------~~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN-RLEVEDGKLTG---------------LVEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee-EEEEECCEEEE---------------EecCccc
Confidence 5899999999999999999999999999999999999998541110 00000000000 00111 1
Q ss_pred CHHHHHHHHHHHhhcC----CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHH
Q psy6866 742 SPLQKLRIVELYQSLD----EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g----~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~ 808 (961)
.+..|..+++.+.++. +.+.++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+..
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHh
Confidence 1233666766654432 35778899999999999999999985 67888999999999999887764
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-07 Score=101.65 Aligned_cols=147 Identities=14% Similarity=0.117 Sum_probs=94.6
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CCceeEechh--------h--ccCCHHHHHHHH-
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS--SDDNVFTGTD--------L--RKITDEELKDIL- 730 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~~v~~g~~--------~--~~~~~~~~~~~~- 730 (961)
.-+.+.++|++|+++|++++++||+....+..+.+++|+..... ..+.++.... + ..++.+.+.+++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44468999999999999999999999999999999999743110 0122222110 0 001111111100
Q ss_pred ----------------------------------------------------------HhcCceE-----EeecCH--HH
Q psy6866 731 ----------------------------------------------------------ETNKELV-----FARTSP--LQ 745 (961)
Q Consensus 731 ----------------------------------------------------------~~~~~~v-----~ar~~p--~~ 745 (961)
....-.+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000000 001111 35
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCCCCHhhhhhCCeeEeecCCcc---Hhhhhc--c-ceEeecCCchHHHHHHH
Q psy6866 746 KLRIVELYQSL------DEIVAVTGDGVNDAPALKKADIGIAMGITGS---EVSKQT--A-DMILMDDNFASIVLGIE 811 (961)
Q Consensus 746 K~~iv~~l~~~------g~~V~~vGDG~ND~~al~~AdvGIamg~~g~---~~a~~a--a-d~vl~~~~~~~i~~~i~ 811 (961)
|...++.+.+. .+.++++||+.||.+||+.|++||||| ++. +..|+. | ++|..+++-+++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666555432 456888899999999999999999999 776 467876 4 58888889999998876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=94.33 Aligned_cols=117 Identities=20% Similarity=0.179 Sum_probs=87.3
Q ss_pred eEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHh
Q psy6866 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILET 732 (961)
Q Consensus 653 ~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~ 732 (961)
.+++.+.+.|.. +|++|++.|+++.++||+....+..+.+++|+..
T Consensus 24 ~~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------- 69 (154)
T TIGR01670 24 EEIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------- 69 (154)
T ss_pred cEEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------
Confidence 445555454432 8999999999999999999999999999999853
Q ss_pred cCceEEeecCHHHHHHHHHHHhh----cCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH-HH
Q psy6866 733 NKELVFARTSPLQKLRIVELYQS----LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS-IV 807 (961)
Q Consensus 733 ~~~~v~ar~~p~~K~~iv~~l~~----~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~-i~ 807 (961)
.|... ..|...++.+.+ ..+.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.-.+ +.
T Consensus 70 ----~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~ 142 (154)
T TIGR01670 70 ----LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVR 142 (154)
T ss_pred ----EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHH
Confidence 22211 234444444432 2356889999999999999999999998 788889999999998665333 54
Q ss_pred HHH
Q psy6866 808 LGI 810 (961)
Q Consensus 808 ~~i 810 (961)
+++
T Consensus 143 ~~~ 145 (154)
T TIGR01670 143 EVC 145 (154)
T ss_pred HHH
Confidence 433
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=9.4e-08 Score=99.41 Aligned_cols=117 Identities=21% Similarity=0.250 Sum_probs=88.0
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCce----eEechhhccCCHHHHHHHHHhcCceE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDN----VFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~----v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-..... +++|. ++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~-------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR-------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece-------------------ee
Confidence 58999999999999999999999999999999999999999653322111 23332 12
Q ss_pred EeecCHHHHHHHHHHHhh-cCC---EEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEee
Q psy6866 738 FARTSPLQKLRIVELYQS-LDE---IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILM 799 (961)
Q Consensus 738 ~ar~~p~~K~~iv~~l~~-~g~---~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~ 799 (961)
--.+..+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 234455789888866655 343 4677799999999999999999985 55555666655443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.62 E-value=3e-07 Score=100.27 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhh-------cCCEEEEEcCCCCCHhhhhhCCeeEeecCCcc-Hh-----hhhccceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQS-------LDEIVAVTGDGVNDAPALKKADIGIAMGITGS-EV-----SKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~-------~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~-~~-----a~~aad~vl~~~~~~~i~~~i 810 (961)
.+|..-++.+.+ ..+.|+++|||.||.+||+.|++||||| ++. +. .+..||++....+-+++.+++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 356665555543 2346777899999999999999999999 444 32 355799999998889998887
Q ss_pred H
Q psy6866 811 E 811 (961)
Q Consensus 811 ~ 811 (961)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 6
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.8e-07 Score=101.20 Aligned_cols=65 Identities=31% Similarity=0.364 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
..|..-++.+.+. .+.++++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-+++..+
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 4688888877653 246788899999999999999999999 8999999999999998888888764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.3e-06 Score=95.48 Aligned_cols=66 Identities=21% Similarity=0.205 Sum_probs=52.8
Q ss_pred HHHHHHHHHhh----cC-CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhh----hcc-ceEe--ecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQS----LD-EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSK----QTA-DMIL--MDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~----~g-~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~----~aa-d~vl--~~~~~~~i~~~i~ 811 (961)
.|...++.+.+ .. +.|+++||+.||.+|++.|++|+||+ +|.+.+| .+| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666666543 24 77888999999999999999999999 9999988 666 6777 4556788888776
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=4e-07 Score=92.90 Aligned_cols=98 Identities=21% Similarity=0.249 Sum_probs=78.3
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~i 749 (961)
.+|+.|++.|+++.++||.....+..+++++|+.. +|. ....|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------~f~--g~~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------LYQ--GQSNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce--------------------------------eec--CCCcHHHH
Confidence 58999999999999999999999999999999853 232 12335555
Q ss_pred HHHHhh-c---CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCC
Q psy6866 750 VELYQS-L---DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDN 802 (961)
Q Consensus 750 v~~l~~-~---g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~ 802 (961)
++.+.+ . .+.++|+||+.||.+|++.|+++++++ ++.+..+..||+++....
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCC
Confidence 544432 2 346889999999999999999999998 778888889999996543
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.3e-06 Score=89.12 Aligned_cols=125 Identities=17% Similarity=0.205 Sum_probs=87.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe--e
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA--R 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a--r 740 (961)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-. ......+.. .+.. .
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~-~~~~~~~~~------------------~i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC-HSLEVDEDG------------------MITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc-ceEEECCCC------------------eEECccc
Confidence 5689999999999999 9999999999999999999999853110 001111000 0111 1
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
..|..|...++.++..++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++..+. +++..+...
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~ 194 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAA 194 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHH
Confidence 2467888888888888888999999999999999999999886 443333444555222 245555443
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.9e-06 Score=89.44 Aligned_cols=117 Identities=22% Similarity=0.229 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+..-. . ..+.... ..... +. .+..+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~-~-~~~~~~~-~g~~~-----------p~-~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY-S-NELVFDE-KGFIQ-----------PD-GIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE-E-EEEEEcC-CCeEe-----------cc-eeeEEc
Confidence 68999999999999999999999999999999999999974310 0 0011100 00000 00 112234
Q ss_pred HHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc
Q psy6866 743 PLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD 795 (961)
Q Consensus 743 p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad 795 (961)
|..|..+++.+.++ .+.+.++||+.||.+|++.|+++++++ .+....+.|+|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 55677777766443 235888999999999999999999997 44444555554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.4e-06 Score=82.50 Aligned_cols=116 Identities=24% Similarity=0.287 Sum_probs=90.6
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIV 750 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv 750 (961)
.|+.+.++||++.++||++...++.=|+++||.. ++.| -.+|....
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-------~~qG---------------------------~~dK~~a~ 88 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-------LYQG---------------------------ISDKLAAF 88 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-------eeec---------------------------hHhHHHHH
Confidence 5999999999999999999999999999999942 2222 24677666
Q ss_pred HHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCC----chHHHHHHHHHHHHHHHHH
Q psy6866 751 ELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDN----FASIVLGIEEGRLIFDNLK 821 (961)
Q Consensus 751 ~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~----~~~i~~~i~~gR~~~~ni~ 821 (961)
+.|.++ -+.|+++||-.||.|+|++.++++|+. .+.+..++.||+|+.... +..+.++|..++..++-..
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 666442 356889999999999999999999998 888888999999998664 3335566666665555443
|
|
| >KOG1615|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.5e-06 Score=85.00 Aligned_cols=110 Identities=17% Similarity=0.268 Sum_probs=77.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+-|++++.+..|++.|.+|+++||--...+..+|.++||...+..-....-+.+-.... . + .--.-+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g------f----d-~~~ptsd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG------F----D-TNEPTSD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc------c----c-cCCcccc
Confidence 478999999999999999999999999999999999999976433211111000000000 0 0 0001122
Q ss_pred HHHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 743 PLQKLRIVELYQSL--DEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 743 p~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
...|.+++..+++. -..++|+|||+||.+|+..||.=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 34789999988873 458999999999999999988777655
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.2e-06 Score=88.04 Aligned_cols=68 Identities=19% Similarity=0.229 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc----eEeecCCchHHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD----MILMDDNFASIVLGIEE 812 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad----~vl~~~~~~~i~~~i~~ 812 (961)
..|...++.+.++ | ..++++||+.||.+||+.|++||+|+ ++.+..|+.|| +|...++-.++.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3777778777553 2 24677899999999999999999999 89999999999 77777777889888863
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.16 E-value=8e-06 Score=85.76 Aligned_cols=111 Identities=14% Similarity=0.100 Sum_probs=77.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE--ee
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF--AR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~--ar 740 (961)
+++|++.+.++.|++.|+++.++||.....+..+.+.++.......+...+.|..+..... .+. .+ ..
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p---------~~~-~~~~~~ 139 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWP---------HPC-DGTCQN 139 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCC---------CCC-cccccc
Confidence 7899999999999999999999999999989888888754322111112233322111000 000 00 01
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
.....|..+++.++...+.+.|+|||.||.+|++.||+++|=+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 1134799999988877778899999999999999999988744
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.5e-05 Score=85.70 Aligned_cols=149 Identities=15% Similarity=0.223 Sum_probs=96.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC----CCceeEech-hhc-----------------
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS----SDDNVFTGT-DLR----------------- 719 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~~~~v~~g~-~~~----------------- 719 (961)
.+..|...++++++++.|+.++++||+.....+.+.+++++..+.. ....++.+. ...
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567889999999999999999999999999999999998755410 011111110 000
Q ss_pred --------c-----------------CCHHH----H---HHHHHhc--C-ceEEe-----ecCH--HHHHHHHHHHhhc-
Q psy6866 720 --------K-----------------ITDEE----L---KDILETN--K-ELVFA-----RTSP--LQKLRIVELYQSL- 756 (961)
Q Consensus 720 --------~-----------------~~~~~----~---~~~~~~~--~-~~v~a-----r~~p--~~K~~iv~~l~~~- 756 (961)
. ...+. + .+.+... . ..+.+ ...| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 00001 1 1111111 0 01111 2232 5788888887653
Q ss_pred ---CCEEEEEcCCCCCHhhhhh-CCeeEeecCCccHhhhhccc-------eEeecCCchHHHHHHH
Q psy6866 757 ---DEIVAVTGDGVNDAPALKK-ADIGIAMGITGSEVSKQTAD-------MILMDDNFASIVLGIE 811 (961)
Q Consensus 757 ---g~~V~~vGDG~ND~~al~~-AdvGIamg~~g~~~a~~aad-------~vl~~~~~~~i~~~i~ 811 (961)
.+.|+++||+.||.+|++. ++.|++|+ ++.+..++.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3567788999999999998 67999999 88888886543 5555556678887776
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00027 Score=82.52 Aligned_cols=99 Identities=20% Similarity=0.242 Sum_probs=74.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
|++|++.+.++++++.|++++++|+-....+..+++.+|+.. .++.+++ ..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd------~Vigsd~--------------------~~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD------GVFASDG--------------------TTNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC------EEEeCCC--------------------ccccC
Confidence 578999999999999999999999999999999999999832 2222221 11355
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHh
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEV 789 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~ 789 (961)
|+.|.+.+......+. +.++||+.||.++++.|+-.++++ .+...
T Consensus 126 g~~K~~~l~~~l~~~~-~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 126 GAAKAAALVEAFGERG-FDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred CchHHHHHHHHhCccC-eeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 6667665543322222 467799999999999999999997 44433
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.3e-05 Score=80.82 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC-CCCceeEechhhccCCHHHHHHHHHhcCceEEee-
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSET-SSDDNVFTGTDLRKITDEELKDILETNKELVFAR- 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar- 740 (961)
+++|++.++++.|++.|+++.++||.....+..+.+.+|+.... ......+.... .+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------~~~g~~ 145 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------EYAGFD 145 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------cEECcc
Confidence 47899999999999999999999999999999999999995311 00000110000 00000
Q ss_pred -----cCHHHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhh--CCeeEeecCCc-cHhhhhccceEeecCCchHHHH
Q psy6866 741 -----TSPLQKLRIVELYQSL--DEIVAVTGDGVNDAPALKK--ADIGIAMGITG-SEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 741 -----~~p~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~--AdvGIamg~~g-~~~a~~aad~vl~~~~~~~i~~ 808 (961)
.....|...++.+.+. .+.+.++||+.||..|.+. ++++++.|... .+.....+|+++. ++..+..
T Consensus 146 ~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 146 ENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred CCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 1123477777766553 2467888999999999877 56667666221 2333456888875 4555543
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.2e-05 Score=79.53 Aligned_cols=93 Identities=24% Similarity=0.276 Sum_probs=69.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCce------eEechhhccCCHHHHHHHHHhcCce
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDN------VFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~------v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..-... .. .++|.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~-~~~~~~~g~~~g~-------------------- 131 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN-RLEFDDNGLLTGP-------------------- 131 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee-eEEECCCCEEeCc--------------------
Confidence 4689999999999999999999999999999999999998531100 01 11111
Q ss_pred EE--eecCHHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhC
Q psy6866 737 VF--ARTSPLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKA 776 (961)
Q Consensus 737 v~--ar~~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~A 776 (961)
+. ....+..|...++.+.+. .+.+.++|||.||.+|++.|
T Consensus 132 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 132 IEGQVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 00 124567899999887653 34678889999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.1e-05 Score=80.80 Aligned_cols=92 Identities=23% Similarity=0.298 Sum_probs=68.9
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHH-
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPL- 744 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~- 744 (961)
+++.+.|+.++++|++++++||+....+..+++.+|+.... ++... +..-. ......+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~-~~~~~-----------~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNE-LFDNG-----------GGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEE-EECTT-----------CCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEe-eeecc-----------cceeeeeECCCC
Confidence 88889999999999999999999999999999999996521 11111 10000 01234555544
Q ss_pred --HHHHHHHHH------hhcCCEEEEEcCCCCCHhhhh
Q psy6866 745 --QKLRIVELY------QSLDEIVAVTGDGVNDAPALK 774 (961)
Q Consensus 745 --~K~~iv~~l------~~~g~~V~~vGDG~ND~~al~ 774 (961)
.|...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 345778999999999999986
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=5.3e-05 Score=80.01 Aligned_cols=43 Identities=7% Similarity=0.098 Sum_probs=38.5
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
.+..-+++.++|++|+++|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=3.9e-05 Score=78.54 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=75.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee-c
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-T 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-~ 741 (961)
++++++.+.++.|++.|+++.++|+........+.+..|+...- ..++.+..... ....+.-....+ ..+.. .
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~~-~~g~~~~~~~~~--~~~~~~~ 145 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF---IEIYSNPASFD-NDGRHIVWPHHC--HGCCSCP 145 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe---eEEeccCceEC-CCCcEEEecCCC--CccCcCC
Confidence 78999999999999999999999999999999999998874311 11222111000 000000000000 01111 1
Q ss_pred CHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 742 SPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
....|..+++.+++. .+.+.++|||.||..|.+.||+-+|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 223588999998886 7889999999999999999988765
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.82 E-value=5e-05 Score=78.88 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=75.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCC-----ceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSD-----DNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~-----~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
.++++++.+.++.+++.|++++++||.....+..+++.+|+..--... ...++|.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~-------------------- 145 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGN-------------------- 145 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCC--------------------
Confidence 468999999999999999999999999999999999999985311000 0011111
Q ss_pred EE-eecCHHHHHHHHHHHhh-cC---CEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 737 VF-ARTSPLQKLRIVELYQS-LD---EIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 737 v~-ar~~p~~K~~iv~~l~~-~g---~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
+. -.+.++.|...++.+.+ .+ +.+.++||+.+|.+|++.|+.++++.
T Consensus 146 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 146 IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 00 12345778887776643 33 25778899999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=6.9e-05 Score=78.96 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=73.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-CCceeEechhhccCCHHHHHHHHHhcCceE-E-e
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS-SDDNVFTGTDLRKITDEELKDILETNKELV-F-A 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v-~-a 739 (961)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +..... .+...++|..+....+ .+... + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp---------~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWP---------HPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEecc---------CCccccccc
Confidence 68999999999999999999999999999999999887 533100 0011122221110000 00000 0 0
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
++ ...|..+++.++...+.+.++|||.||.+|.+.||+.++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 01 124888888887776778899999999999999999776
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00012 Score=84.22 Aligned_cols=143 Identities=20% Similarity=0.228 Sum_probs=89.5
Q ss_pred hHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC----CceeEechhhc-----------------------
Q psy6866 668 VPDAI-DACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS----DDNVFTGTDLR----------------------- 719 (961)
Q Consensus 668 ~~~~I-~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~----~~~v~~g~~~~----------------------- 719 (961)
...++ +++++.|+..++.||+.+..+..+.++.++..+..- ...+..+....
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 34444 889999999999999999999999999998765210 00111110000
Q ss_pred ----------------c----CCHHH-------HHHHHHhc--C-ceE-----EeecCH--HHHHHHHHHHhhc------
Q psy6866 720 ----------------K----ITDEE-------LKDILETN--K-ELV-----FARTSP--LQKLRIVELYQSL------ 756 (961)
Q Consensus 720 ----------------~----~~~~~-------~~~~~~~~--~-~~v-----~ar~~p--~~K~~iv~~l~~~------ 756 (961)
+ ..++. +.+.+... . ..+ +....| ..|...++.|.+.
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 0 00111 11111110 0 001 223333 4688888888654
Q ss_pred -CCEEEEEcCCCCCHhhhhhCC-eeEeecCCccHhhhhcc--------ceEee-cCCchHHHHHHH
Q psy6866 757 -DEIVAVTGDGVNDAPALKKAD-IGIAMGITGSEVSKQTA--------DMILM-DDNFASIVLGIE 811 (961)
Q Consensus 757 -g~~V~~vGDG~ND~~al~~Ad-vGIamg~~g~~~a~~aa--------d~vl~-~~~~~~i~~~i~ 811 (961)
.+.++++||+.||.+||+.|+ .||||| ++.+..|+.+ +++.. +.+-++|.++++
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 236778899999999999999 699999 8998888643 55544 345677887775
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00023 Score=75.10 Aligned_cols=126 Identities=21% Similarity=0.254 Sum_probs=92.7
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
...+-|+++++++.|+++|++..++|+.....+..+.+..|+...-. .++.+.+ .-..+
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~------------------~~~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDD------------------VPPPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCC------------------CCCCC
Confidence 34678999999999999999999999999999999999999965321 1111111 01223
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC---eeEeecCC-ccHhhhhccceEeecCCchHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKAD---IGIAMGIT-GSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad---vGIamg~~-g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
-.|.....+.+.+....+.++||||..+|..|=++|+ ||+..|.+ ..+.....+|+++. ++..+...
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~ 216 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLAL 216 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHH
Confidence 4666666776666655447999999999999999998 88888843 34556667899886 45555443
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00025 Score=74.92 Aligned_cols=127 Identities=21% Similarity=0.256 Sum_probs=85.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++||........+.+..|+.... ..++.+.+.. ..+-.
T Consensus 93 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 151 (226)
T PRK13222 93 RLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF---SVVIGGDSLP------------------NKKPD 151 (226)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc---cEEEcCCCCC------------------CCCcC
Confidence 57899999999999999999999999999999999999985321 1122221100 01122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe-eEee--cCC-ccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI-GIAM--GIT-GSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv-GIam--g~~-g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
|+--..+++.++...+.+.++||+.||+.|.+.|++ +|.+ |.. ..+.....+++++ +++..+...+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333344455554445678899999999999999988 4444 311 2233445678777 467777766543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00019 Score=68.63 Aligned_cols=117 Identities=18% Similarity=0.198 Sum_probs=77.2
Q ss_pred eecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 659 SLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 659 ~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.-..++.+++.+.++.|++.|++++++||.....+....+.+|+.... ..++.......-.... ..........+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~--~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF---DPVITSNGAAIYYPKE--GLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh---hheeccchhhhhcccc--ccccccccccc
Confidence 445589999999999999999999999999999999999999873211 1111111000000000 00001112244
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhh-CCeeE
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKK-ADIGI 780 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~-AdvGI 780 (961)
.+-.|+.+..+.+.+....+.+.++||+.+|+.|++. ..-+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 5667777777777776556778899999999999998 44444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00036 Score=73.60 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=35.4
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
+.++++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 34899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00026 Score=76.83 Aligned_cols=131 Identities=14% Similarity=0.210 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCCCceeEe--ch---------------------
Q psy6866 663 PPRPAVPDAIDACHK-AGIRVIMVTGDHPCTAKAIAIKCHIL--SETSSDDNVFT--GT--------------------- 716 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~-agi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~~~~v~~--g~--------------------- 716 (961)
.+-+++.++|+.|++ .|+.++++||+.......+.+.+++. ..+. ..+.+ +.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nG--a~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHG--AERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCC--CeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 445789999999998 89999999999999998888776631 1110 00000 00
Q ss_pred -------h-----------hccCC--HHHHHHH----HHhcCce------EEeecCH--HHHHHHHHHHhhc----CCEE
Q psy6866 717 -------D-----------LRKIT--DEELKDI----LETNKEL------VFARTSP--LQKLRIVELYQSL----DEIV 760 (961)
Q Consensus 717 -------~-----------~~~~~--~~~~~~~----~~~~~~~------v~ar~~p--~~K~~iv~~l~~~----g~~V 760 (961)
. ..... .+.+..+ ....... .+....| .+|...++.+.+. .+.+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 0 00011 1111111 1111101 1112222 5788888876553 3567
Q ss_pred EEEcCCCCCHhhhhhC----CeeEeecCCccHhhhhccceEeec
Q psy6866 761 AVTGDGVNDAPALKKA----DIGIAMGITGSEVSKQTADMILMD 800 (961)
Q Consensus 761 ~~vGDG~ND~~al~~A----dvGIamg~~g~~~a~~aad~vl~~ 800 (961)
+++||+.||.+||+.+ +.||+|| ++. ..|++.+.+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~ 232 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG 232 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC
Confidence 8889999999999999 9999999 553 346776663
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00082 Score=69.95 Aligned_cols=124 Identities=19% Similarity=0.240 Sum_probs=83.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++.|+++.++|+.....+....+..|+...- ..++...+ ....+-.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f---~~i~~~~~------------------~~~~KP~ 133 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF---DHVIGSDE------------------VPRPKPA 133 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe---eeEEecCc------------------CCCCCCC
Confidence 67899999999999999999999999999898888899885311 01111111 0112333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE---eecC-CccHhhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI---AMGI-TGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI---amg~-~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+--..+++.++-..+.++|+||+.+|..+-++|++.. .-|. +..+..+..+|+++. ++..+..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~ 202 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLAL 202 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHH
Confidence 44444455555444567899999999999999998864 3331 222345667888874 45555443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00089 Score=79.54 Aligned_cols=40 Identities=8% Similarity=0.048 Sum_probs=36.0
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
.-+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356899999999999999999999999999999999873
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0018 Score=70.52 Aligned_cols=123 Identities=15% Similarity=0.247 Sum_probs=78.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.++.|+.... ..++.+.+.. ..+-.
T Consensus 101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f---~~i~~~d~~~------------------~~Kp~ 159 (272)
T PRK13223 101 VVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF---RWIIGGDTLP------------------QKKPD 159 (272)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC---eEEEecCCCC------------------CCCCC
Confidence 68899999999999999999999999998888888888874311 1122221100 01122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee---EeecCC-ccHhhhhccceEeecCCchHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG---IAMGIT-GSEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG---Iamg~~-g~~~a~~aad~vl~~~~~~~i~~ 808 (961)
|+--..+.+.+.-..+.+.|+||+.||+.|.+.|++. ++.|.. ..+.....+|.++. ++..+..
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~ 227 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLP 227 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHH
Confidence 2222233333332345688999999999999999973 333311 22233457888874 5555543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0019 Score=69.27 Aligned_cols=42 Identities=10% Similarity=0.110 Sum_probs=38.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
..-+.+.++|++|+++||.++++||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455668999999999999999999999999999999999853
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0022 Score=67.28 Aligned_cols=125 Identities=22% Similarity=0.223 Sum_probs=82.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+-+..|+...- ..++.+.+. -..+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~------------------~~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF---DVVITLDDV------------------EHAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce---eEEEecCcC------------------CCCCCC
Confidence 47799999999999999999999999999999999999985421 111111110 011233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee---EeecCCccH-hhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG---IAMGITGSE-VSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG---Iamg~~g~~-~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--..+++.+.-....++++||+.+|..|-++|++- ++-|....+ .....+|+++. ++..+...+
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 4444445555543445688999999999999999984 434421222 23345787765 566665543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.003 Score=66.02 Aligned_cols=121 Identities=17% Similarity=0.174 Sum_probs=78.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+...- ..++.+.+. -..+-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF---SVLIGGDSL------------------AQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC---cEEEecCCC------------------CCCCCC
Confidence 57899999999999999999999999999999999999985421 112221110 011222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee---cCCcc-HhhhhccceEeecCCchHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM---GITGS-EVSKQTADMILMDDNFASI 806 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam---g~~g~-~~a~~aad~vl~~~~~~~i 806 (961)
|+-=..+.+.+.-..+.++++||+.+|+.|.++|++-... |-... +.....+|+++. ++..+
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l 209 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNEL 209 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHH
Confidence 3323334444433345688999999999999999987542 21111 222345787764 34444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0043 Score=65.47 Aligned_cols=99 Identities=16% Similarity=0.206 Sum_probs=68.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+........+.+..|+...- ..++.+.+. -..+-.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~Kp~ 150 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF---DALASAEKL------------------PYSKPH 150 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc---cEEEEcccC------------------CCCCCC
Confidence 57899999999999999999999999999999999999985431 112222110 012233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
|+-=..+.+.+.-..+.++++||+.||+.+-+.|++....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~ 190 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIV 190 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEE
Confidence 3322222222222234678999999999999999987543
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0071 Score=65.03 Aligned_cols=128 Identities=14% Similarity=0.224 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---C------ceeEechhhccCCHHHHHHHHHhc
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---D------DNVFTGTDLRKITDEELKDILETN 733 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---~------~~v~~g~~~~~~~~~~~~~~~~~~ 733 (961)
++||++.+.++.|++.|+++.++||-....+..+.++.|+...... + .-+++|.. .
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~------------- 185 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G------------- 185 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C-------------
Confidence 6899999999999999999999999999999999999998543311 0 01122210 0
Q ss_pred CceEEeecCHHHHHHHHHH-----Hh--hcCCEEEEEcCCCCCHhhhhhC---CeeEeec-CCc-cH----hhhhccceE
Q psy6866 734 KELVFARTSPLQKLRIVEL-----YQ--SLDEIVAVTGDGVNDAPALKKA---DIGIAMG-ITG-SE----VSKQTADMI 797 (961)
Q Consensus 734 ~~~v~ar~~p~~K~~iv~~-----l~--~~g~~V~~vGDG~ND~~al~~A---dvGIamg-~~g-~~----~a~~aad~v 797 (961)
..+. ...|.+.+.. +. .....+.++|||.||++|..-. ..-+..| .+. .| .-+++=|+|
T Consensus 186 -P~i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -PLIH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -Cccc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011 1345543332 22 2234577889999999996543 2233333 121 12 235688999
Q ss_pred eecCCchHHHHHH
Q psy6866 798 LMDDNFASIVLGI 810 (961)
Q Consensus 798 l~~~~~~~i~~~i 810 (961)
+.+|.=-.++.+|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9988655555444
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0056 Score=63.87 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=73.5
Q ss_pred CCCCChHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAID-ACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~-~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
.++|++.++|+ .+++.|++++++|+-....+..+|+..++.... ..+ |.++..... ....-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i--~t~le~~~g----------g~~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI--ASQIERGNG----------GWVLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE--EEEeEEeCC----------ceEcCccC
Confidence 46899999996 788899999999999999999999986653311 111 222111000 00112346
Q ss_pred CHHHHHHHHHHHh-hcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 742 SPLQKLRIVELYQ-SLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 742 ~p~~K~~iv~~l~-~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
..++|..-++..- ...+...+=||+.||.|||+.||..++++
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 7789988776543 22234445599999999999999999985
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0041 Score=64.59 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCH 701 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g 701 (961)
++.+.+.++|++|++.|+.++++||+....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467889999999999999999999999999999988744
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.011 Score=61.89 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=73.7
Q ss_pred CCCCChHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAI-DACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I-~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
.+.|++.+.| +.+++.|++++++|+-...-+..+++.+|+... +..+ |.++... ......-..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~~i--~t~l~~~----------~tg~~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VNLI--ASQMQRR----------YGGWVLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---CceE--EEEEEEE----------EccEECCccC
Confidence 4589999999 578889999999999999999999999996221 0111 2111110 0000112346
Q ss_pred CHHHHHHHHHHH-hhcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 742 SPLQKLRIVELY-QSLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 742 ~p~~K~~iv~~l-~~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
..++|..-++.. ........+=||+.||.|||+.|+.+++++
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 778998877754 323334445599999999999999999986
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.012 Score=62.51 Aligned_cols=124 Identities=17% Similarity=0.074 Sum_probs=82.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+...- ..++.+.+. -..+-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~------------------~~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC---AVLIGGDTL------------------AERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc---cEEEecCcC------------------CCCCCC
Confidence 57899999999999999999999999988888888888875321 122222110 112334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe---ecCC-ccH-hhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA---MGIT-GSE-VSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa---mg~~-g~~-~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+--..+++.+.-..+.+.|+||+.||..|-+.|++... -|.. ..+ .....+|+++. ++..+...
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~ 223 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNP 223 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHH
Confidence 444445555555445678899999999999999987643 3311 111 22345888875 45555443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.01 Score=63.69 Aligned_cols=68 Identities=24% Similarity=0.294 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHh-----hh---hccceEeec-CCchHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEV-----SK---QTADMILMD-DNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~-----a~---~aad~vl~~-~~~~~i~~~i 810 (961)
..|...|+.|+++ .+.|.++||+.||.+||..++-||.+| ++.+. .. ....+.... ..-.+|++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 5799999888764 234566799999999999999999999 66666 22 222333443 3445677776
Q ss_pred HH
Q psy6866 811 EE 812 (961)
Q Consensus 811 ~~ 812 (961)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.015 Score=62.56 Aligned_cols=118 Identities=15% Similarity=0.127 Sum_probs=80.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+...- ..++.+.+.. ..+-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F---d~iv~~~~~~------------------~~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF---QAVIIGSECE------------------HAKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC---cEEEecCcCC------------------CCCCC
Confidence 57889999999999999999999999999999999999985421 1233333211 12334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe---ecCCccHhhhhccceEeecC
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA---MGITGSEVSKQTADMILMDD 801 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa---mg~~g~~~a~~aad~vl~~~ 801 (961)
|+--....+.+.-..+.+.|+||+.+|+.+-++|++-.. -|....+.....+|+++.+.
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 444444555554445668899999999999999987533 22111122234678887643
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.019 Score=71.61 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhhC---CeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQSL--DEIVAVTGDGVNDAPALKKA---DIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~A---dvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
.+|+..++.+.+. .+.|+++||+.||.+||+.+ +.+|+|| ++ +.+|++.+.+. ..+...+
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHH
Confidence 5788888888763 34788899999999999986 6899998 43 56788888754 4454443
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.019 Score=62.52 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=79.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.++++.|++.|+++.++|+.....+..+-+.+|+...- ..++.+.+ + ...
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F---~~vi~~~~-------------------~--~~k 197 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF---SVVQAGTP-------------------I--LSK 197 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe---EEEEecCC-------------------C--CCC
Confidence 57799999999999999999999999999999999999985421 11222211 0 011
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe---ecCCccH-hhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA---MGITGSE-VSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa---mg~~g~~-~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--..+++.+.-..+.++|+||+.+|+.+-++|++-.. -|....+ .....+|+++. ++..+...+
T Consensus 198 ~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 198 RRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 221122223332234568899999999999999987643 2311111 22345888874 566665543
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.019 Score=60.39 Aligned_cols=97 Identities=30% Similarity=0.313 Sum_probs=69.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC--CCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL--SETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
++.+|+.+.++.|++.|+++.++|+-....+..+.+..|+. ... ..++.+.+.. ..+
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f---~~i~~~~~~~------------------~~K 145 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV---DAVVCPSDVA------------------AGR 145 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC---CEEEcCCcCC------------------CCC
Confidence 78999999999999999999999999999999999999985 211 1222222210 112
Q ss_pred cCHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 741 TSPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
-.|+-=...++.+.-. .+.++|+||+.+|..+-++|++..
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 2333323333333322 357899999999999999999986
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.025 Score=57.14 Aligned_cols=142 Identities=20% Similarity=0.267 Sum_probs=89.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-Cc------eeEechh---------hccCCHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-DD------NVFTGTD---------LRKITDEEL 726 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~------~v~~g~~---------~~~~~~~~~ 726 (961)
++-|++.++++.|++. ...+++|---.+-+..+|.-+|+...+.. .. .+-++.- ...++.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5679999999999876 44555666667778899999998543221 00 0111100 001122222
Q ss_pred HHHHHhcCceEEeecCHHHHHHHH---------------HHHhhc---CCEEEEEcCCCCCHhhhhhCC----eeEeecC
Q psy6866 727 KDILETNKELVFARTSPLQKLRIV---------------ELYQSL---DEIVAVTGDGVNDAPALKKAD----IGIAMGI 784 (961)
Q Consensus 727 ~~~~~~~~~~v~ar~~p~~K~~iv---------------~~l~~~---g~~V~~vGDG~ND~~al~~Ad----vGIamg~ 784 (961)
-+-+. .+|.|..|.+-.+++ +.+-+. ....+++||++.|..||+.+. +.||.
T Consensus 162 fe~lD----e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaF-- 235 (315)
T COG4030 162 FEKLD----ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAF-- 235 (315)
T ss_pred HHHHH----HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEe--
Confidence 22111 157777775444444 443332 334678899999999998863 44554
Q ss_pred CccHhhhhccceEeecCCchHHHHHHH
Q psy6866 785 TGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 785 ~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
||.+-|...||+.+.+.+..+....|+
T Consensus 236 NGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 236 NGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cCCcccccccceEEeccchhhhhHHHH
Confidence 799999999999999998888776665
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.016 Score=62.64 Aligned_cols=116 Identities=12% Similarity=0.081 Sum_probs=77.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++.|+++.++|+.....+..+-+.+|+...- ..++.+.+.. ..+-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F---d~ii~~~d~~------------------~~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF---SVVLAAEDVY------------------RGKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC---cEEEecccCC------------------CCCCC
Confidence 56899999999999999999999999999999999999985421 2233333211 12333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe-ecCCccHhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA-MGITGSEVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa-mg~~g~~~a~~aad~vl~ 799 (961)
|+-=...++.+.-..+.++|+||..+|+.|-++|++-.. +...+.......+|+++.
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~ 225 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR 225 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC
Confidence 433334444444444568889999999999999998432 210222222234676654
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.012 Score=60.80 Aligned_cols=93 Identities=17% Similarity=0.066 Sum_probs=67.1
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
+++.+.+.++++.|++.|+++.++||.....+..+-+.+|+...- ..++.+.+ +..+-
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f---~~~~~~~~-------------------~~~KP 162 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF---PVQIWMED-------------------CPPKP 162 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC---CEEEeecC-------------------CCCCc
Confidence 456777899999999999999999999999999999999985421 11222211 12244
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhC
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKA 776 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~A 776 (961)
.|+--..+++.+.-..+.++|+||+.+|+.+-++|
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 55554555666655556788999999999886654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.034 Score=60.43 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=67.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.++++.|++.|+++.++||.....+..+-+..|+..... ..++.+.+. -..+-.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~--d~i~~~~~~------------------~~~KP~ 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP--DHVVTTDDV------------------PAGRPY 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc--eEEEcCCcC------------------CCCCCC
Confidence 567899999999999999999999999988887777776643210 122222211 112233
Q ss_pred HHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCe---eEeec
Q psy6866 743 PLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADI---GIAMG 783 (961)
Q Consensus 743 p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~Adv---GIamg 783 (961)
|+-=....+.+.-. .+.++||||+.+|+.+-+.|++ |+.-|
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 33333344444322 2568899999999999999996 55544
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.032 Score=58.63 Aligned_cols=114 Identities=17% Similarity=0.108 Sum_probs=73.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+++|+++.++|+.....+...-+..|+... ..++.+.+. -..+-.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~----~~i~~~~~~------------------~~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP----EVFVTAERV------------------KRGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc----cEEEEHHHh------------------cCCCCC
Confidence 5789999999999999999999999887766666666776321 123333211 112233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecCCcc-HhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGITGS-EVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~~g~-~~a~~aad~vl~ 799 (961)
|+--....+.+.-..+.+.|+||..+|+.+-+.|++- |++. .+. ......+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 4333444444444456788999999999999999984 4443 222 222335677654
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.036 Score=59.71 Aligned_cols=97 Identities=21% Similarity=0.194 Sum_probs=67.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+-++.|+..... ..++.+.+. -..+-.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~--d~ii~~~~~------------------~~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP--DYNVTTDDV------------------PAGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC--ceEEccccC------------------CCCCCC
Confidence 467999999999999999999999999999999888888754210 122222211 112334
Q ss_pred HHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCee
Q psy6866 743 PLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 743 p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvG 779 (961)
|+-=...++.+.-. .+.++||||..+|+.+-+.|++-
T Consensus 159 p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 44334444444422 34588999999999999999964
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0084 Score=63.44 Aligned_cols=88 Identities=26% Similarity=0.330 Sum_probs=60.8
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGD----HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..++.+.+..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~~-------------------- 171 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKPG-------------------- 171 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCCC--------------------
Confidence 4445999999999999999999998 677999999999995421 1222222110
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG 779 (961)
...| +|. ..+++.+ .+.|+||..||..+-+.|++-
T Consensus 172 ~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 172 QYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 0112 132 2344444 468899999999999988764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.01 Score=62.81 Aligned_cols=88 Identities=25% Similarity=0.328 Sum_probs=62.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH----PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~----~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.+.+++.+.++.+++.|+++.++||+. ..++..+.+..|+...... .. ++
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f-~v-------------------------il 167 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN-PV-------------------------IF 167 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce-eE-------------------------EE
Confidence 477889999999999999999999964 6688999998999322111 12 22
Q ss_pred eecCH--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 739 ARTSP--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 739 ar~~p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
+.-++ .+|.. .+++.+ .++|+||..+|..+-+.|++-.
T Consensus 168 ~gd~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 168 AGDKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred cCCCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 22211 23433 334444 4778999999999999998753
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.01 Score=58.19 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=72.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.++|+.++.++.+++.+++++++|+-...-...+-...+=-....+ ..++........+. ...+++..-+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~-idi~sn~~~ih~dg---------~h~i~~~~ds 142 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYC-IDIVSNNDYIHIDG---------QHSIKYTDDS 142 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceee-eEEeecCceEcCCC---------ceeeecCCcc
Confidence 5889999999999999999999998877766666665541110000 01111111000000 0001222222
Q ss_pred H--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 743 P--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 743 p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
+ .+|...|+.+++..+.+.+||||+.|..|-+.+|+=+|
T Consensus 143 ~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 143 QFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 2 68999999999999999999999999999998888875
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.034 Score=55.12 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=66.2
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCceeEe-chhhccCCHHHHHHHHH
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAK---AIAIKC---H--ILSETSSDDNVFT-GTDLRKITDEELKDILE 731 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~---~ia~~~---g--i~~~~~~~~~v~~-g~~~~~~~~~~~~~~~~ 731 (961)
+|.+.+++.+++++++++|++++++||+....+. ....++ | +.. ..++.. |..+....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~~~~--------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFAALH--------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchhhhh---------
Confidence 4788999999999999999999999999988874 444442 2 221 012222 21111100
Q ss_pred hcCceEEeecCHHHHHHHHHHHhh-----cCCEEEEEcCCCCCHhhhhhCCee
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQS-----LDEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~~-----~g~~V~~vGDG~ND~~al~~AdvG 779 (961)
.+ +..+-.-+.|...++.+.+ ....++..||+.+|+.+.++++|-
T Consensus 92 --~e-~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 --RE-VISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred --cc-cccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 00 2222222348778877766 346777789999999998877553
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.045 Score=55.26 Aligned_cols=99 Identities=13% Similarity=0.003 Sum_probs=59.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPC--------TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNK 734 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~--------ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~ 734 (961)
++-|++.++++.|++.|+++.++|+.... .+....+..|+.. ++.+.... ..
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~-------~~~~~~~~-------------~~ 87 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD-------IYLCPHKH-------------GD 87 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE-------EEECcCCC-------------CC
Confidence 36899999999999999999999987631 1222334455532 11100000 00
Q ss_pred ceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 735 ELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 735 ~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
..-..+-.|+-=..+++.+.-.-+.+.|+||..+|+.+=++|++-..
T Consensus 88 ~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 88 GCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 00012333433344445444334568899999999999999987654
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.063 Score=54.60 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHP---------------CTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
.+.|++.++++.|++.|+++.++|..+. .....+-+..|+... .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-----~i~~~~~~~~------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-----GIYYCPHHPE------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-----eEEECCCCCC-------
Confidence 4689999999999999999999998762 111222334454210 1111000000
Q ss_pred HHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee
Q psy6866 728 DILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 728 ~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG 779 (961)
...-..+-.|+--..+++.+.-..+.++|+||+.+|+.+-+.|++.
T Consensus 97 ------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 97 ------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred ------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 0001123334444445555544456788999999999999999974
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.057 Score=63.59 Aligned_cols=122 Identities=15% Similarity=0.140 Sum_probs=79.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+-....+..+.+.+|+...- ..++.+.+.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f---~~i~~~d~v~-------------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV---TETFSIEQIN-------------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc---ceeEecCCCC-------------------CCCC
Confidence 68899999999999999999999999999999999999985421 1223332211 1123
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecC-CccHhhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGI-TGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~-~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--...++.+. -+.+.++||+.+|+.+-+.|++- |.+.- .+.+.....+|+++. ++..+...+
T Consensus 388 P~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 388 SDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred cHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 332222222222 24688999999999999999974 33321 122222345788875 556665544
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.06 Score=51.53 Aligned_cols=92 Identities=21% Similarity=0.225 Sum_probs=63.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH--------PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNK 734 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~--------~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~ 734 (961)
++.+++.++++.|+++|+++.++|+.. ......+.+.+|+... .....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~----~~~~~~-~----------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID----VLYACP-H----------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE----EEEECC-C-----------------
Confidence 678999999999999999999999988 7777888888887421 111111 0
Q ss_pred ceEEeecCHHHHHHHHHHHh-hcCCEEEEEcC-CCCCHhhhhhCCee
Q psy6866 735 ELVFARTSPLQKLRIVELYQ-SLDEIVAVTGD-GVNDAPALKKADIG 779 (961)
Q Consensus 735 ~~v~ar~~p~~K~~iv~~l~-~~g~~V~~vGD-G~ND~~al~~AdvG 779 (961)
..+-.|+-=..+++.++ -..+.++|+|| ..+|+.+-+.|++-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01222333334444442 34467889999 58999999988764
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.044 Score=56.52 Aligned_cols=97 Identities=19% Similarity=0.259 Sum_probs=65.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-+......+.+.+|+...- ..++...+. -..+-.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f---d~i~~s~~~------------------~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF---DAVLSADAV------------------RAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh---heeEehhhc------------------CCCCCC
Confidence 57899999999999999999999999988888888999974321 112222110 011222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-.-+.+.++||+.+|+.+-++|++-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 32223333444333456889999999999988888754
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.059 Score=59.16 Aligned_cols=118 Identities=20% Similarity=0.169 Sum_probs=73.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+-+......+-+..+..... ....++.+.+. -..+-.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~-~~~~~v~~~~~------------------~~~KP~ 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERA-QGLDVFAGDDV------------------PKKKPD 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccccc-CceEEEecccc------------------CCCCCC
Confidence 57899999999999999999999998888777665555321110 00112222211 012333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCcc--HhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGS--EVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~--~~a~~aad~vl~ 799 (961)
|+-=..+.+.+.-..+.++||||+.+|+.|-++|++....-..|. ......+|+++.
T Consensus 205 p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 433344445554445568899999999999999997765432332 111235788774
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.059 Score=56.89 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=65.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+.|++.+.++.|++.|+++.++|+-....+...-+..|+...- ..++.+.+.. ..+-.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f---d~iv~s~~~~------------------~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL---DLLLSTHTFG------------------YPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC---CEEEEeeeCC------------------CCCCC
Confidence 57899999999999999999999998888888877778874321 1122221110 01122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-..+.++|+||..+|+.+-+.|++..
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 22222333333333456889999999999999999963
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.037 Score=58.22 Aligned_cols=112 Identities=20% Similarity=0.285 Sum_probs=70.4
Q ss_pred CCCCChHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 663 PPRPAVPDAIDAC--HKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l--~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
|+.|+.+++++.+ ++.|+.+.++|.-|..--..+-+.-|+...- ..+++....-.-+. .+ .+.+.. ..-+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f---~~I~TNpa~~~~~G-~l-~v~pyh-~h~C~~ 144 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF---SEIFTNPACFDADG-RL-RVRPYH-SHGCSL 144 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc---ceEEeCCceecCCc-eE-EEeCcc-CCCCCc
Confidence 6788999999999 5689999999999999999998998885321 12222211100000 00 000000 012234
Q ss_pred cCH-HHHHHHHHHHhhc----C---CEEEEEcCCCCC-Hhhhh--hCCeeE
Q psy6866 741 TSP-LQKLRIVELYQSL----D---EIVAVTGDGVND-APALK--KADIGI 780 (961)
Q Consensus 741 ~~p-~~K~~iv~~l~~~----g---~~V~~vGDG~ND-~~al~--~AdvGI 780 (961)
+.| .=|..+++.+++. | +.|.++|||.|| ||+++ .+|+-.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 444 4799999888764 4 689999999999 45543 455544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.053 Score=60.04 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=76.1
Q ss_pred eecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 659 SLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 659 ~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
...+++.+++.++++.|++.|++++++||.....+..+.+.+|+..... ..+.|.+ .....+... --
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f---~~i~~~~-------~~~~~~~~~---~~ 249 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF---DDLIGRP-------PDMHFQREQ---GD 249 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch---hhhhCCc-------chhhhcccC---CC
Confidence 3577999999999999999999999999999999999999988853110 0011111 000000000 01
Q ss_pred eecCHHHHHHHHHHHhh-cCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 739 ARTSPLQKLRIVELYQS-LDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~-~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
-+-.|+-+...++.+.. .-+.++|+||..+|+.+-+.|++-.
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 25566777777766544 3367889999999999999999875
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.069 Score=56.09 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-....+....+.+|+...- ..++.+.+.. ..+-.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f---~~i~~~~~~~------------------~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF---DAVITSEEEG------------------VEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc---cEEEEeccCC------------------CCCCC
Confidence 57899999999999999999999999888888888888874321 1122221110 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-..+.+.|+||.. +|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEE
Confidence 3322333344433345688999998 9999999998743
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.052 Score=55.19 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=60.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+++|+++.++|+... +....+.+|+...- ..++.+.+. -..+-.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF---DAIVDPAEI------------------KKGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC---cEEEehhhc------------------CCCCCC
Confidence 5789999999999999999999997532 35567777774321 122222211 112233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=....+.+.-..+.+.||||+.+|+.+-+.|++-.
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 33223333333323345788999999999999998753
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.11 Score=52.29 Aligned_cols=111 Identities=11% Similarity=0.007 Sum_probs=69.9
Q ss_pred EEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHh
Q psy6866 654 LIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGD-HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILET 732 (961)
Q Consensus 654 ~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~ 732 (961)
.....+-+-++.|++.++++.|+++|+++.++|+- ....+..+-..+|+....... .+...
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------------------~~~~~ 97 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------------------PMHSL 97 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------------------cHHHh
Confidence 33444445578999999999999999999999976 888888888888874111000 00000
Q ss_pred cCceEEeecCHHHH--HHHHHHHhhc------CCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 733 NKELVFARTSPLQK--LRIVELYQSL------DEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 733 ~~~~v~ar~~p~~K--~~iv~~l~~~------g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
....+.+.-.+..| ..+.+.+.+. -+.++|+||...|+.+-++|++-.+.
T Consensus 98 Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 98 FDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01112222111112 2334444322 25688999999999999999886653
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.099 Score=52.87 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=62.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+-.... ..+..++|+...- ..++.+.+. -..+-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f---~~i~~~~~~------------------~~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF---DVVIFSGDV------------------GRGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC---CEEEEcCCC------------------CCCCCC
Confidence 678999999999999999999999988777 5555558874321 112222110 112223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv 778 (961)
|+--..+.+.+.-..+.+.++||...|+.+-++|++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333344444444445678899999999999888876
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.15 Score=57.54 Aligned_cols=115 Identities=13% Similarity=0.119 Sum_probs=77.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.||+.++++.|++.|+++.++|+-....+..+-+..||...- ..++.+.+.. ...-.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF---d~Iv~sddv~------------------~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF---SVIVAAEDVY------------------RGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc---eEEEecCcCC------------------CCCCC
Confidence 46799999999999999999999999999999999999985421 1222222110 11233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCc-cHhh-hhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG-SEVS-KQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g-~~~a-~~aad~vl~ 799 (961)
|+-=...++.+.-..+.++|+||..+|+.|-+.|++-.. +... .... ...||+++.
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I-gV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV-AVASKHPIYELGAADLVVR 332 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE-EECCCCChhHhcCCCEEEC
Confidence 443444555555456678899999999999999998543 3222 2111 234777764
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.018 Score=61.89 Aligned_cols=54 Identities=19% Similarity=0.209 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhhcCCEEEEEcC----CCCCHhhhhhC-CeeEeecCCccHhhhhccceEe
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGD----GVNDAPALKKA-DIGIAMGITGSEVSKQTADMIL 798 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGD----G~ND~~al~~A-dvGIamg~~g~~~a~~aad~vl 798 (961)
.+|+.-++.|.+..+.|+++|| |.||.+||+.| -.|++++ ++.+.+|..|.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 5899999999877677778899 99999999976 5677777 88888888776544
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.26 Score=50.06 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=33.7
Q ss_pred ChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 667 AVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 667 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
.+.+.+.+|+++|++|+.+|.-....-...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 3678899999999999999999999999999999986
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.064 Score=53.45 Aligned_cols=97 Identities=20% Similarity=0.270 Sum_probs=68.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|++++++|+..........+.+|+...- ..++...+.. ..+-.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f---~~i~~~~~~~------------------~~Kp~ 135 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF---DEIISSDDVG------------------SRKPD 135 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC---SEEEEGGGSS------------------SSTTS
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc---ccccccchhh------------------hhhhH
Confidence 67899999999999999999999999999999999999986211 1222222111 01222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+++.+.-..+.+.+|||+..|+.+-+.|++--
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 33334455555444567889999999999999887643
|
... |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.15 Score=53.46 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=63.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++. +++.++|+-....+..+.+++|+...- ..++.+.+. -..+-.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f---d~i~~~~~~------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF---DDIFVSEDA------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc---CEEEEcCcc------------------CCCCCC
Confidence 5789999999999999 999999999998888888999885421 112211110 011223
Q ss_pred HHHHHHHHHHH-hhcCCEEEEEcCCC-CCHhhhhhCCe
Q psy6866 743 PLQKLRIVELY-QSLDEIVAVTGDGV-NDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l-~~~g~~V~~vGDG~-ND~~al~~Adv 778 (961)
|+-=...++.+ .-..+.++||||+. +|+.+=+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~ 192 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGL 192 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCC
Confidence 32223334444 32335688999998 89999999996
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.34 Score=50.93 Aligned_cols=123 Identities=12% Similarity=0.089 Sum_probs=73.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+ .|+++.++|......+...-+..|+...- ..++.+.+. -..+-.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f---d~v~~~~~~------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF---DLLVISEQV------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc---CEEEEECcc------------------CCCCCC
Confidence 47899999999999 68999999998888888877888874311 111111110 011223
Q ss_pred HHHHHHHHHHHhh-cCCEEEEEcCCC-CCHhhhhhCCeeE-eecCCccH-hhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQS-LDEIVAVTGDGV-NDAPALKKADIGI-AMGITGSE-VSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~-~g~~V~~vGDG~-ND~~al~~AdvGI-amg~~g~~-~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+-=..+++.+.- ..+.+.+|||+. +|+.+=++|++-. .+...+.+ .....+|+++. ++..+...
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 221 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQL 221 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHH
Confidence 3322333444432 235688999998 7999999999853 33211211 11124677664 45555543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.11 Score=52.38 Aligned_cols=86 Identities=22% Similarity=0.187 Sum_probs=60.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE--e
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH-PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF--A 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~--a 739 (961)
.+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. .+ .
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~--------------------------------~~~~~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV--------------------------------LPHAV 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE--------------------------------EcCCC
Confidence 577899999999999999999999987 577777878887632 11 1
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeE
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGI 780 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGI 780 (961)
+-.|+-=..+.+.+.-..+.++||||.. .|..+-+.|++-.
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 2223222223333332345688999998 7999999988743
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.089 Score=53.44 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=60.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+...- ..++.+.+. -..+..
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f---~~v~~~~~~------------------~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF---DAIVDADEV------------------KEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC---CEeeehhhC------------------CCCCCC
Confidence 68999999999999999999999987 5567777788874311 111111110 011122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+.+.+.-..+.+.++||+.+|+.+-+.|++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 22112223333223356778999999999999998753
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.23 Score=50.18 Aligned_cols=27 Identities=26% Similarity=0.311 Sum_probs=24.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH 689 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~ 689 (961)
++.|++.++|+.|+++|+++.++|.-+
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.19 Score=57.62 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=65.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAI-KCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~-~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.|+++.++|+.....+...-+ ..|+...- ..++.+.+. -..+-
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F---d~ii~~d~v------------------~~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF---SVIVGGDEV------------------EKGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC---CEEEehhhc------------------CCCCC
Confidence 467999999999999999999999998888776654 56763311 122222211 11233
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
.|+-=..+++.+.-..+.+.|+||+.+|+.+-+.|++..
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 333334444444434567888999999999999999864
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.3 Score=52.67 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=58.6
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPC---TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~---ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.++-|++.+.++.+++.|+++.++|+.... .+...-++.|+..... +.++
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---------------------------d~ll 169 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---------------------------EHLL 169 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---------------------------ceEE
Confidence 467899999999999999999999998743 3334556678753211 1134
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhh
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPAL 773 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al 773 (961)
.|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 44332345555556655556799999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.21 Score=48.91 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=58.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHP---------------CTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
++.|++.++++.|++.|+++.++|.... .....+.+.+|+... ..+.......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-----GVLFCPHHPA------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-----EEEECCCCCC-------
Confidence 4789999999999999999999998662 344556677777421 0000000000
Q ss_pred HHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 728 DILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 728 ~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
...-..+-.|+-=..+++.+.-..+.+.||||...|+.+-+.|++-.
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000111222112222333223356889999999999988887754
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.27 Score=50.86 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=59.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.++++.|++.|+++.++|+-... .....+.+|+...- ..++...+. -..+-+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f---d~i~~s~~~------------------~~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF---DFVVTSYEV------------------GAEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc---ceEEeeccc------------------CCCCCC
Confidence 57799999999999999999999976543 46666777773311 111111110 011223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIG 779 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvG 779 (961)
|+-=..+++.+.-..+.++||||+. +|+.+-++|++-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 3222233333333346788999997 899988888753
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.26 Score=48.36 Aligned_cols=90 Identities=19% Similarity=0.174 Sum_probs=57.7
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
..+++.+.++.|++.|+++.++|+-....+....+.. +.... ..++...+ +..+-.|
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f---~~i~~~~~-------------------~~~Kp~~ 121 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF---DLILGSDE-------------------FGAKPEP 121 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC---cEEEecCC-------------------CCCCcCH
Confidence 3478999999999999999999999988888877765 32210 11111110 1122333
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKAD 777 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad 777 (961)
+-=..+.+.+.-.. .++++||..+|+.+-++|+
T Consensus 122 ~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 122 EIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 33333333333334 6889999999999877764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.88 Score=48.61 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=38.0
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAK--AIAIKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~--~ia~~~gi~~ 704 (961)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 445556778999999999999999999999986554433 4567888853
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.22 Score=49.63 Aligned_cols=97 Identities=16% Similarity=0.037 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCceeEe----chhhccCCH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH---------------PCTAKAIAIKCHILSETSSDDNVFT----GTDLRKITD 723 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~---------------~~ta~~ia~~~gi~~~~~~~~~v~~----g~~~~~~~~ 723 (961)
++-|++.++++.|++.|+++.++|.-. ...+..+.+++|+.-. ..++. ..+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~~~~~----- 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFPDDNC----- 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCCCCCC-----
Confidence 567899999999999999999999742 3355666777777310 11111 0000
Q ss_pred HHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 724 EELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 724 ~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
-...-.|+-=..+++.+.-..+.+.||||+.+|..+-+.|++-..
T Consensus 100 -------------~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 -------------DCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------CCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 011111221122222222223468899999999999999988654
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.78 E-value=0.31 Score=47.62 Aligned_cols=83 Identities=18% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
..-|++++-++.++++|+++.++|.-+...+...+..+|+.. ++--..
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f--------------------------------i~~A~K 93 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF--------------------------------IYRAKK 93 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce--------------------------------eecccC
Confidence 466788999999999999999999999999999999999953 454555
Q ss_pred HHHHHHHHHHHhh---cCCEEEEEcCCC-CCHhhhhhCCe
Q psy6866 743 PLQKLRIVELYQS---LDEIVAVTGDGV-NDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l~~---~g~~V~~vGDG~-ND~~al~~Adv 778 (961)
|..+ .+-+++++ .-+.|+||||-. .|+-+=+.|++
T Consensus 94 P~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 94 PFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred ccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 6544 33444444 456899999986 57766555543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.17 Score=49.53 Aligned_cols=96 Identities=11% Similarity=-0.006 Sum_probs=64.1
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
-++||++.+.++.|+ .++++.++|.-....+..+-+.+++.... ...++.+.+.. +.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~--f~~i~~~~d~~--------------------~~ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF--GYRRLFRDECV--------------------FV 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE--eeeEEECcccc--------------------cc
Confidence 367999999999999 57999999999999999999988874311 01222222211 11
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
.|. =...++.+....+.+.++||..+|..+-+.|+|-|.
T Consensus 101 KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 KGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred CCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 221 011123333345678899999999998877866653
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.63 Score=48.86 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=65.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCH---ILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g---i~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
-++.+++.++++.|+++|+++.++|..+......+-+..+ +...- ...++ ..+.
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f---~~~fd--------------------~~~g 150 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYF---SGYFD--------------------TTVG 150 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhc---ceEEE--------------------eCcc
Confidence 3789999999999999999999999988877666655542 21100 00000 0122
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
..-.|+-=..+++.+.-..+.++|+||...|+.|-++|++-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23344444455555544446788999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.32 E-value=0.21 Score=53.50 Aligned_cols=69 Identities=19% Similarity=0.159 Sum_probs=49.4
Q ss_pred EEeecCHHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhC--------CeeEeecCCccHhhhhccceEeecCCch
Q psy6866 737 VFARTSPLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKA--------DIGIAMGITGSEVSKQTADMILMDDNFA 804 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~A--------dvGIamg~~g~~~a~~aad~vl~~~~~~ 804 (961)
+-.+..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..||+|+ .+ ..+..|++++. +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHH
Confidence 44455667899888887653 34688999999999999999 5888885 33 23567888886 445
Q ss_pred HHHHHH
Q psy6866 805 SIVLGI 810 (961)
Q Consensus 805 ~i~~~i 810 (961)
.+...+
T Consensus 234 ~v~~~L 239 (244)
T TIGR00685 234 QVLEFL 239 (244)
T ss_pred HHHHHH
Confidence 555444
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=92.27 E-value=0.5 Score=49.54 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=55.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCT---AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
|.-|++.++++.+++.|++|+++||+.... +..--++.|+..- +.+++.+.+- .
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~---~~LiLR~~~d--------------------~ 176 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW---KHLILRGLED--------------------S 176 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc---CeeeecCCCC--------------------C
Confidence 788999999999999999999999998755 2222345666431 1222222100 0
Q ss_pred ecCH-HHHHHHHHHHhhcCC-EEEEEcCCCCCHh
Q psy6866 740 RTSP-LQKLRIVELYQSLDE-IVAVTGDGVNDAP 771 (961)
Q Consensus 740 r~~p-~~K~~iv~~l~~~g~-~V~~vGDG~ND~~ 771 (961)
+.+- .-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 1111 116666666666665 7888999998873
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=92.25 E-value=0.62 Score=58.66 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=31.4
Q ss_pred CCCCChHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH
Q psy6866 663 PPRPAVPDAIDAC-HKAGIRVIMVTGDHPCTAKAIAIK 699 (961)
Q Consensus 663 ~lr~~~~~~I~~l-~~agi~v~m~TGD~~~ta~~ia~~ 699 (961)
.+-+++.+++++| ++.|+.|+++||+...+....-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 4567889999997 788999999999999998887644
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.39 Score=50.43 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=59.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCCCCCCCCceeEech--hhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA-IAIKCHILSETSSDDNVFTGT--DLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~-ia~~~gi~~~~~~~~~v~~g~--~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
++.|++.++|+.|++.|+++.++||-....... ..+..++.... ..++.+. +. -..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f---~~i~~~~~~~~------------------~~~ 136 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM---HHVVTGDDPEV------------------KQG 136 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC---CEEEECChhhc------------------cCC
Confidence 578999999999999999999999977653332 22222332100 1122221 10 011
Q ss_pred ecCHHHHHHHHHHHh---hcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 740 RTSPLQKLRIVELYQ---SLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 740 r~~p~~K~~iv~~l~---~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
+-.|+-=...++.+. -..+.+.||||+..|+.|-+.|++-..
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 223333334444443 223568899999999999999998653
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.56 Score=52.73 Aligned_cols=100 Identities=17% Similarity=0.039 Sum_probs=58.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD---------------HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
++.|++.++++.|+++|+++.++|+- ....+..+.+..|+... ..++... .. .
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~-~~--s----- 97 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPH-FP--E----- 97 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCC-cC--c-----
Confidence 68999999999999999999999982 13345556666776310 1111100 00 0
Q ss_pred HHHHhcCceEEee-cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 728 DILETNKELVFAR-TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 728 ~~~~~~~~~v~ar-~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
+...+| ..|.-=..+.+.+.-..+.+.||||+.+|..+-+.|++-..
T Consensus 98 -------d~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 -------DNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -------ccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 000111 12211112222222223678899999999999999988754
|
|
| >KOG3120|consensus | Back alignment and domain information |
|---|
Probab=91.02 E-value=1.4 Score=44.98 Aligned_cols=119 Identities=19% Similarity=0.220 Sum_probs=68.4
Q ss_pred CCCCChHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGI-RVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..|+..-- ..+++.....+.+. ...+..+....-+.+|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F---~~IfTNPa~~da~G--~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLF---SEIFTNPACVDASG--RLLVRPYHTQHSCNLC 158 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHH---HHHhcCCcccCCCC--cEEeecCCCCCccCcC
Confidence 778999999999999997 89999999988888887777763100 00000000000000 0000000000123333
Q ss_pred CH-HHHHHHHHHHhhc-------CCEEEEEcCCCCC-HhhhhhCCeeEeecCCc
Q psy6866 742 SP-LQKLRIVELYQSL-------DEIVAVTGDGVND-APALKKADIGIAMGITG 786 (961)
Q Consensus 742 ~p-~~K~~iv~~l~~~-------g~~V~~vGDG~ND-~~al~~AdvGIamg~~g 786 (961)
.+ .=|..++..++.. -+.+..+|||.|| ||+++...--+||--.|
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkg 212 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKG 212 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCC
Confidence 33 2477777666532 2378889999999 67776666666665334
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.26 E-value=0.97 Score=45.22 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=56.7
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPC------------TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE 731 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~------------ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 731 (961)
+-|++.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+.+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-----~~ii~~~~~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-----QVLAATHAG------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-----EEEEecCCC-------------
Confidence 3489999999999999999999975432 3456677888732 112211110
Q ss_pred hcCceEEeecCHHHHHHHHHHHh--hcCCEEEEEcCCC--------CCHhhhhhCCeeE
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQ--SLDEIVAVTGDGV--------NDAPALKKADIGI 780 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~--~~g~~V~~vGDG~--------ND~~al~~AdvGI 780 (961)
....-.|+-=..+.+.+. -..+.+.||||.. +|..+-++|++-.
T Consensus 105 -----~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -----LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -----CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001112222223333332 1235688999986 6999888887654
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=90.22 E-value=0.68 Score=60.06 Aligned_cols=132 Identities=14% Similarity=0.153 Sum_probs=82.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+-|++.+.++.|+++|+++.++|+-....+..+-++.|+..... ..++.+.+.. ..+-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F--d~iv~~~~~~------------------~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF--DAIVSADAFE------------------NLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC--CEEEECcccc------------------cCCCC
Confidence 357899999999999999999999999998888888888842110 1222222111 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE-eec--CCccHhhhhccceEeecCCchHHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI-AMG--ITGSEVSKQTADMILMDDNFASIVLGIEEGR 814 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI-amg--~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR 814 (961)
|+-=...++.+.-..+.+.++||..+|+.+-+.|++-. .+. ....+.....+|+++.+-.--++...+..|-
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~ 295 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGS 295 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCC
Confidence 33333444444444566888999999999999998732 222 1112233456788876543333555554443
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.6 Score=48.58 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=56.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCT--AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
++.|++.++++.|++.|+++.++|...... ........++...- ..++...+ .-..+
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f---d~v~~s~~------------------~~~~K 152 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF---DAVVESCL------------------EGLRK 152 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC---CEEEEeee------------------cCCCC
Confidence 678999999999999999999999865432 22222223332110 01111100 00112
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
-.|+-=..+.+.+.-..+.++|+||...|+.+=++|++-.
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 2333323333444333456788899999999999998754
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=89.99 E-value=0.62 Score=44.41 Aligned_cols=39 Identities=13% Similarity=0.182 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD-HPCTAKAIAIKCH 701 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~g 701 (961)
++.+++.+.++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777767666665
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=89.66 E-value=0.99 Score=44.96 Aligned_cols=86 Identities=20% Similarity=0.184 Sum_probs=64.3
Q ss_pred cCCCCCChHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH
Q psy6866 661 YDPPRPAVPDAIDACHKAGI--RVIMVTGD-------HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE 731 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi--~v~m~TGD-------~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 731 (961)
++.+-++..+.+++|++.+. +|+++|-- +...|..+++.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 35788899999999999987 49999986 4889999999999831
Q ss_pred hcCceEEeecCHHHHHHHHHHHhhc-----CCEEEEEcCCC-CCHhhhhhCC
Q psy6866 732 TNKELVFARTSPLQKLRIVELYQSL-----DEIVAVTGDGV-NDAPALKKAD 777 (961)
Q Consensus 732 ~~~~~v~ar~~p~~K~~iv~~l~~~-----g~~V~~vGDG~-ND~~al~~Ad 777 (961)
..+....|.-..++.+.++.+ -+.++||||-. .|+-|=...+
T Consensus 110 ----l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 110 ----LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 124445786667788888654 56799999975 5666544433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=89.40 E-value=4.9 Score=43.30 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=36.9
Q ss_pred eeeeecCC----CCCChHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCC
Q psy6866 656 GLISLYDP----PRPAVPDAIDACHKAGIRVIMVTGDHPCT---AKAIAIKCHIL 703 (961)
Q Consensus 656 G~i~~~D~----lr~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~ 703 (961)
|.+.-.+. +=|++.++|++|+++|++++++||.+..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 78899999999999999999999977664 44445566764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.16 E-value=2.7 Score=47.25 Aligned_cols=45 Identities=11% Similarity=-0.012 Sum_probs=34.3
Q ss_pred ceEEeeeeecC--CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Q psy6866 652 FRLIGLISLYD--PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA 697 (961)
Q Consensus 652 l~~lG~i~~~D--~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia 697 (961)
.||+-++.-.| .+-+++.++|++|. .|+.++++||+.......+.
T Consensus 120 GTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 120 GTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 34444443222 36788999999999 78999999999999988874
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.75 E-value=0.66 Score=52.53 Aligned_cols=62 Identities=21% Similarity=0.195 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhhc-C-----C-EEEEEcCCCCCHhhhhh-----CCeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D-----E-IVAVTGDGVNDAPALKK-----ADIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g-----~-~V~~vGDG~ND~~al~~-----AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
.+|...|+.+.+. | . .++++||+.||..||+. +++||+|| ++... -.|++.|.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 4899999888653 2 2 24788999999999996 69999999 55433 256777764 34444333
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=88.61 E-value=5.8 Score=46.88 Aligned_cols=96 Identities=13% Similarity=-0.030 Sum_probs=61.4
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCC-----ceeEechhhccCCHHHHHHHHHhcCceE
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK-CHILSETSSD-----DNVFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~-----~~v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
+++++. +.+++.|.+ +++|+-...-++.+|++ +|+..--... .-.++|. +
T Consensus 111 l~~~a~---~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~--------------------i 166 (497)
T PLN02177 111 VHPETW---RVFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF--------------------M 166 (497)
T ss_pred cCHHHH---HHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee--------------------e
Confidence 455544 455667754 99999999999999987 7985210000 1111221 1
Q ss_pred Ee--ecCHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCeeEeecC
Q psy6866 738 FA--RTSPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIGIAMGI 784 (961)
Q Consensus 738 ~a--r~~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvGIamg~ 784 (961)
-. .+.-++|..-++..... -..+ +-||+.||.|||+.|+-+.+++.
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~~g~~~~~~-aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKEFGDALPDL-GLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred cCCCCCccHHHHHHHHHHhCCCCceE-EEECCccHHHHHHhCCccEEeCC
Confidence 11 13557788877643321 1234 55999999999999999999983
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=88.44 E-value=0.96 Score=50.53 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=65.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK----CHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~----~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
++.+++.++++.|++.|+.+.++|.-+...+..+-++ +|+... +. .+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~---------------------------f~-~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED---------------------------FD-ARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH---------------------------ee-EEE
Confidence 4578999999999999999999999999999998887 666321 00 122
Q ss_pred eecCH--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 739 ARTSP--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 739 ar~~p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
+...| +.=..+.+.+.-.-+.++|+||...|+.+.+.+...+.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 22233 222333333332346788999999999999998887654
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.08 E-value=0.85 Score=50.75 Aligned_cols=48 Identities=19% Similarity=0.250 Sum_probs=39.0
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA---IKCHIL 703 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~ 703 (961)
|.+.-.+.+=+++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977766666 567764
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=86.62 E-value=4.6 Score=43.33 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=39.3
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTG---DHPCTAKAIAIKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~~ 704 (961)
|.+.-.+.+-+++.++|++|++.|++++++|| ..........+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44445566677999999999999999999996 66777777778888753
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.15 E-value=1.1 Score=43.95 Aligned_cols=86 Identities=27% Similarity=0.383 Sum_probs=61.3
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPC----TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+++-+++.|..-++.|=.++.+||+.+. ++..+|+...|...+ .++|+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~----------------------------pv~f~ 166 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN----------------------------PVIFA 166 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc----------------------------ceeec
Confidence 5666789999999999999999999754 556677777774321 13555
Q ss_pred ecCH-HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe
Q psy6866 740 RTSP-LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778 (961)
Q Consensus 740 r~~p-~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv 778 (961)
--.| -.+..-..++|+.+-.+-. ||+.||+.|-|.|++
T Consensus 167 Gdk~k~~qy~Kt~~i~~~~~~IhY-GDSD~Di~AAkeaG~ 205 (237)
T COG3700 167 GDKPKPGQYTKTQWIQDKNIRIHY-GDSDNDITAAKEAGA 205 (237)
T ss_pred cCCCCcccccccHHHHhcCceEEe-cCCchhhhHHHhcCc
Confidence 4444 1223335567777777666 999999999998865
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.91 E-value=1.9 Score=44.33 Aligned_cols=97 Identities=12% Similarity=0.153 Sum_probs=57.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK-CHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.|+++.++|.-+.......-.. .++...- ..++...+. -..+-
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f---d~v~~s~~~------------------~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA---DHIYLSQDL------------------GMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc---CEEEEeccc------------------CCCCC
Confidence 4689999999999999999999999776554332221 2221100 011111110 01122
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
.|+-=..+++.+.-..+.+.++||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 233223334444434456789999999999988888854
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.32 E-value=3.3 Score=43.29 Aligned_cols=97 Identities=14% Similarity=0.155 Sum_probs=62.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.| ++++.++|+.....+...-+..|+...-. ..++.+.+.. ..+-.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~--~~v~~~~~~~------------------~~KP~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP--DKLFSGYDIQ------------------RWKPD 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc--ceEeeHHhcC------------------CCCCC
Confidence 4568999999988 48999999998888887777788743210 1222322111 01223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
|+-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 3333333334433345688999999999999999987653
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=83.03 E-value=31 Score=44.65 Aligned_cols=85 Identities=13% Similarity=0.117 Sum_probs=54.4
Q ss_pred CCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccC-----CCe-eEE----EECCeEEEEECCCcccceEEEecC
Q psy6866 198 PQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMI-----PTR-ATV----IRNGSVKEIDSAGLVRGDIVLLKI 267 (961)
Q Consensus 198 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-----~~~-~~V----~R~G~~~~I~~~eLv~GDIV~l~~ 267 (961)
|.+.+.+.++++++++++.+.++.+++..++..+...+.. ..+ ..+ +.-|....+...|.+|.|.+.++.
T Consensus 128 ~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 128 WIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 3345556666667778888888888876666554343221 122 222 245889999999999999999864
Q ss_pred CCeeeccEEEEeeCCc
Q psy6866 268 GDKVPADIRLIEIQDL 283 (961)
Q Consensus 268 Gd~IPaD~ill~g~~l 283 (961)
...=+|=-.|.|++.
T Consensus 208 -~~l~VdES~LTGES~ 222 (941)
T TIGR01517 208 -LSLEIDESSITGESD 222 (941)
T ss_pred -CcEEEEecccCCCCC
Confidence 344455555555553
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.40 E-value=5 Score=40.62 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=61.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+++++|+ .++.++|.-+...+....+..|+...- ..++.+.+...- ...++-.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f---d~i~~~~~~~~~--------------~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF---DGIFCFDTANPD--------------YLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh---CeEEEeecccCc--------------cCCCCCC
Confidence 46788999999997 478999999988899999999984321 112221110000 0001223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+-=..+++.+....+.++|+||...|+.+=+.|++-.
T Consensus 144 p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 33334444555444566889999999999888887654
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.39 E-value=3.3 Score=41.80 Aligned_cols=100 Identities=22% Similarity=0.299 Sum_probs=60.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHH---hcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILE---TNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~---~~~~~v~a 739 (961)
.+.+++.+++..|+++|++++|+|- +.||... -+++.++..++..-...+.. ....+.+|
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG------YFTEADFDKLHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc------CccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence 3578999999999999999999994 3344321 12223333322211111111 12334666
Q ss_pred ecCHHH--------HHHHHHHHhhcC---CEEEEEcCCCCCHhhhhhCCee
Q psy6866 740 RTSPLQ--------KLRIVELYQSLD---EIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 740 r~~p~~--------K~~iv~~l~~~g---~~V~~vGDG~ND~~al~~AdvG 779 (961)
.-.|++ ..-+.+.+++.+ ....+|||...|..+-..|+++
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 666653 334445555544 5778999999999988877776
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.31 E-value=3.9 Score=41.43 Aligned_cols=91 Identities=19% Similarity=0.179 Sum_probs=60.1
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHH
Q psy6866 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKL 747 (961)
Q Consensus 668 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~ 747 (961)
..++++.|++. +++.++|+.....+...-+..|+...- ..++.+.+. -..+-.|+-=.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f---d~i~~~~~~------------------~~~KP~p~~~~ 149 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF---DAVVAADDV------------------QHHKPAPDTFL 149 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc---eEEEehhhc------------------cCCCCChHHHH
Confidence 46889999875 899999999999999999999985321 122222211 11223333334
Q ss_pred HHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 748 RIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 748 ~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
...+.+.-....+.++||..+|+.+=+.|++-.
T Consensus 150 ~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 150 RCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 444444433345778899999999999998754
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=81.77 E-value=39 Score=44.37 Aligned_cols=39 Identities=18% Similarity=0.245 Sum_probs=28.2
Q ss_pred ECCeEEEEE--CCCcccceEEEecCCCeeeccEEEEeeCCcee
Q psy6866 245 RNGSVKEID--SAGLVRGDIVLLKIGDKVPADIRLIEIQDLKA 285 (961)
Q Consensus 245 R~G~~~~I~--~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~v 285 (961)
.-|....+. ..+.+|.|.+.++ |+ +=+|=-.|.|++.-+
T Consensus 248 vpGDiv~l~~~~g~~iPaD~~ll~-g~-~~VdES~LTGES~Pv 288 (1054)
T TIGR01657 248 VPGDIVSIPRPEEKTMPCDSVLLS-GS-CIVNESMLTGESVPV 288 (1054)
T ss_pred CCCCEEEEecCCCCEecceEEEEe-Cc-EEEecccccCCccce
Confidence 348888998 8999999999996 43 446655666665433
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=81.73 E-value=3.4 Score=42.33 Aligned_cols=92 Identities=11% Similarity=0.091 Sum_probs=53.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-CCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS-SDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.+ +.+++|.-+.......-+.+++..-.. .-..+ +.++.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i------------------------~~~~~ 128 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV------------------------LMCGH 128 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE------------------------EEecc
Confidence 47899999999999875 566667654444444445566532100 00011 12222
Q ss_pred CHHHHHHHHH-HHhhcC-CEEEEEcCCCCCHhhhhhC--CeeE
Q psy6866 742 SPLQKLRIVE-LYQSLD-EIVAVTGDGVNDAPALKKA--DIGI 780 (961)
Q Consensus 742 ~p~~K~~iv~-~l~~~g-~~V~~vGDG~ND~~al~~A--dvGI 780 (961)
... |.+++. .+++.| +.++|+||..+|+.+-++| ++-.
T Consensus 129 ~~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 129 DES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred Ccc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 111 223333 222233 4577999999999999999 8854
|
2 hypothetical protein; Provisional |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=81.15 E-value=1.3 Score=40.34 Aligned_cols=49 Identities=24% Similarity=0.339 Sum_probs=36.6
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA---IKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~~ 704 (961)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +++|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 566677888999999999999999999999988755544444 5677743
|
... |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=81.13 E-value=14 Score=40.24 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=36.0
Q ss_pred eeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHH---HHHHcCCCC
Q psy6866 656 GLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA---IAIKCHILS 704 (961)
Q Consensus 656 G~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~---ia~~~gi~~ 704 (961)
|.+.-.+.+=+++.++|++|++.|++++++|+....+... --+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 4444466777889999999999999999999976443333 335577743
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 961 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 0.0 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 0.0 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 0.0 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 0.0 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 6e-92 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-91 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-91 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-90 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 5e-55 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-45 | ||
| 1mo7_A | 213 | Atpase Length = 213 | 7e-38 | ||
| 1q3i_A | 214 | Crystal Structure Of Na,K-Atpase N-Domain Length = | 7e-34 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 6e-17 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 8e-17 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 4e-15 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 7e-15 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 7e-15 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 9e-14 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-12 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 4e-11 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 6e-09 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-06 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 2e-06 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 2e-06 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MO7|A Chain A, Atpase Length = 213 | Back alignment and structure |
|
| >pdb|1Q3I|A Chain A, Crystal Structure Of Na,K-Atpase N-Domain Length = 214 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 961 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-35 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 9e-33 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-32 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-06 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-31 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-31 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-10 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-29 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-10 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-21 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 3e-08 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-08 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 1e-07 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 6e-07 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 8e-07 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 8e-07 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 8e-07 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 1e-06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 3e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 7e-06 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 7e-06 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-05 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 2e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 1150 bits (2976), Expect = 0.0
Identities = 402/916 (43%), Positives = 570/916 (62%), Gaps = 28/916 (3%)
Query: 71 SLEKKSHPRFVLDCSKKSILRFIHKEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTH 130
+ + P D + K + + +L ++K E++I++H + + EL T
Sbjct: 9 LYQVELGPGPSGDMAAKMSKKKAGRGGGKRKEKLENMKKEMEINDHQLSVAELEQKYQTS 68
Query: 131 PDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLE 190
+GLS L +DGPN+L + G L+W A + +A+ ++
Sbjct: 69 ATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQ 128
Query: 191 AETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVK 250
A + DNL+L + L +VTG F +YQE KS++I SF ++P +ATVIR+G
Sbjct: 129 ASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKF 188
Query: 251 EIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVE 310
+I++ LV GD+V +K GD+VPADIR+++ Q K +NSSLTGE EP T + T+ +E
Sbjct: 189 QINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLE 248
Query: 311 SRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMW 370
+RN+ FFST + G+ +G+V+ TG T++G+IA L + +E + TPI E++HF+ +I+
Sbjct: 249 TRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGL 308
Query: 371 ALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIV 430
A+ GA F++A+ IGY +L A V+ + I+VA VPEGLLAT+TV L+LTAKRLASKNC+V
Sbjct: 309 AILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVV 368
Query: 431 RRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTY 489
+ L+ VETLGS IC+DKTGTLTQN+MTV HL F+ I+ D Q F+ ++ T+
Sbjct: 369 KNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETW 428
Query: 490 KTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVT 549
+ L R LC++A F+ QD +P+ +R GDA+E +L F + + + R FPKV
Sbjct: 429 RALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVC 488
Query: 550 EVPFNSLNKFHLTVH---FSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYE 606
E+PFNS NKF L++H ++ L+MKGAPE ++ERC++++ + +E L + +
Sbjct: 489 EIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIK-GQELPLDEQWREA 547
Query: 607 LEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRP 666
+ GERVL F L+L + ++P + F + MNFP+SG GL+S+ DPPR
Sbjct: 548 FQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRA 607
Query: 667 AVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSE--------------------- 705
VPDA+ C AGIRVIMVTGDHP TAKAIA I+SE
Sbjct: 608 TVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNR 667
Query: 706 TSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGD 765
+ V G L+ + EL + L T+ E+VFARTSP QKL IVE Q L IVAVTGD
Sbjct: 668 KDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGD 727
Query: 766 GVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIA 825
GVND+PALKKADIG+AMGI GS+ +K ADMIL+DDNFASIV G+E+GRLIFDNLKKSIA
Sbjct: 728 GVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIA 787
Query: 826 YILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPR 885
Y L NIPE+ P+L YI + +PLP+ +T+L I+L TD++P+VSLAYEK ES+IM PR
Sbjct: 788 YTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPR 847
Query: 886 NPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NN 943
NP+ D LV L Y+YF +G +++ AGF YF M GW P+ + +R WE++ +
Sbjct: 848 NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQD 907
Query: 944 LEDSYHKMWTRTERTW 959
L+DSY + WT +R +
Sbjct: 908 LQDSYGQEWTFGQRLY 923
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 1148 bits (2971), Expect = 0.0
Identities = 437/894 (48%), Positives = 594/894 (66%), Gaps = 28/894 (3%)
Query: 95 KEKEMDVAQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQ 154
K+K L +LK EV +D+H + L+EL++ T RGL+ K L +DGPNSL
Sbjct: 28 KDKIDKKRDLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTP 87
Query: 155 KYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIV 214
+F GFS LLW GA+L FLAY ++A T +E DNL+LG++L+ IV
Sbjct: 88 PPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIV 147
Query: 215 TGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPAD 274
TG FS+YQE KSS I +SF M+P +A VIR+G I++ +V GD+V +K GD++PAD
Sbjct: 148 TGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPAD 207
Query: 275 IRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTG 334
+R+I K +NSSLTGE EP T + ++ +E+RN+ FFSTN V G+ +GVV+ TG
Sbjct: 208 LRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTG 267
Query: 335 SNTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACV 394
TVMG+IA L + LE TPI E++HF+ +I+ A+ LG F+L+L +GY+WL A +
Sbjct: 268 DRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVI 327
Query: 395 YVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLT 454
++IGIIVANVPEGLLAT+TV LTLTAKR+A KNC+V+ L+ VETLGS TIC+DKTGTLT
Sbjct: 328 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 387
Query: 455 QNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPM 513
QN+MTV H+ F+ +I+ + F+ T+ T+ L R A LC++A F+ QDN+P+
Sbjct: 388 QNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPI 447
Query: 514 RERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVH---FSPLNK 570
+R +GDA+E +L I+ S+Q +R+ PK+ E+PFNS NK+ L++H S ++
Sbjct: 448 LKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESR 507
Query: 571 YFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLG 630
Y L+MKGAPE I++RC+T++ E L + K ++ GERVL F L
Sbjct: 508 YLLVMKGAPERILDRCSTILLN-GAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALP 566
Query: 631 QNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHP 690
++ + + F D NFP++ +GL+++ DPPR AVPDA+ C AGI+VIMVTGDHP
Sbjct: 567 EDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHP 626
Query: 691 CTAKAIAIKCHILSE---------------------TSSDDNVFTGTDLRKITDEELKDI 729
TAKAIA I+SE + V G+DL+ ++ E L DI
Sbjct: 627 ITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDI 686
Query: 730 LETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEV 789
L + E+VFARTSP QKL IVE Q IVAVTGDGVND+PALKKADIG+AMGI+GS+V
Sbjct: 687 LHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV 746
Query: 790 SKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLP 849
SKQ ADMIL+DDNFASIV G+EEGRLIFDNLKKSIAY L SNIPEI PFL +I +PLP
Sbjct: 747 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLP 806
Query: 850 VSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILE 909
+ TVT+LCIDLGTDM PA+SLAYE+ ES+IM R+PRNP+TD LV +L++ AY +G+++
Sbjct: 807 LGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQ 866
Query: 910 TLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRTERTWTY 961
L GF +YF ++ + G+ PMDL+ R W+ +++EDS+ + WT +R
Sbjct: 867 ALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVE 920
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 756 bits (1953), Expect = 0.0
Identities = 261/905 (28%), Positives = 409/905 (45%), Gaps = 98/905 (10%)
Query: 116 HLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRI----------NNVYVLV 165
H EE + GL+ +VKR LEK G N LP + ++ V +
Sbjct: 6 HSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRI 65
Query: 166 GYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERK 225
L A +SF+ L E EE + +IL + I + +QER
Sbjct: 66 ----------LLLAACISFV--LAWFEEGEETITAFVEPFVILLIL-IANAIVGVWQERN 112
Query: 226 SSHITESFAKMIPTRATVIRNG--SVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ-- 281
+ + E+ + P V R SV+ I + +V GDIV + +GDKVPADIR++ I+
Sbjct: 113 AENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKST 172
Query: 282 DLKAENSSLTGEVEPV---TCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTV 338
L+ + S LTGE V T + + + +N++F TN+ +G G+V TG +T
Sbjct: 173 TLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTE 232
Query: 339 MGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIG------YNWLNA 392
+GKI E+ TP++Q++ F +S + +L+ + +W+
Sbjct: 233 IGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRG 292
Query: 393 CVYV----IGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTD 448
+Y + + VA +PEGL A +T L L +R+A KN IVR L +VETLG IC+D
Sbjct: 293 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSD 352
Query: 449 KTGTLTQNKMTVLHL---------SFNREIYHV------------KNGVDVDIQNFETNT 487
KTGTLT N+M+V + + + + KN + F+
Sbjct: 353 KTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDG-- 410
Query: 488 TYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATE----------------VGILHFI 531
L LC+ + + N+ + G+ATE V L +
Sbjct: 411 -LVELATICALCNDSSLDFNETK---GVYEKVGEATETALTTLVEKMNVFNTEVRNLSKV 466
Query: 532 QPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP-----LNKYFLLMKGAPEVIMERC 586
+ +R K + F+ K + +KGAPE +++RC
Sbjct: 467 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRC 526
Query: 587 TTMMAESDKEAFLTAEKKYELEDKIKLF--ASKGERVLAFADLHLGQNNFPVNFKFSTDP 644
+ + + +T K ++ IK + R LA A + S+
Sbjct: 527 NYVRVGTTRVP-MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRF 585
Query: 645 MNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704
M + + +G++ + DPPR V +I C AGIRVIM+TGD+ TA AI + I
Sbjct: 586 MEYET-DLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG 644
Query: 705 ETS-SDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVT 763
E D +TG + + E ++ + FAR P K +IVE QS DEI A+T
Sbjct: 645 ENEEVADRAYTGREFDDLPLAEQREACR--RACCFARVEPSHKSKIVEYLQSYDEITAMT 702
Query: 764 GDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKS 823
GDGVNDAPALKKA+IGIAMG +G+ V+K ++M+L DDNF++IV +EEGR I++N+K+
Sbjct: 703 GDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQF 761
Query: 824 IAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSRE 883
I Y+++SN+ E++ LG+P + V +L ++L TD PA +L + P+ +IM R
Sbjct: 762 IRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRP 821
Query: 884 PRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESNNN 943
PR+P+ + L+ L Y +G A A P + +
Sbjct: 822 PRSPK-EPLISGWLFFR-YMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTE 879
Query: 944 LEDSY 948
+
Sbjct: 880 DHPHF 884
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 656 bits (1694), Expect = 0.0
Identities = 190/829 (22%), Positives = 357/829 (43%), Gaps = 94/829 (11%)
Query: 102 AQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNV 161
+ L D+KNE +D IP+EE++ L + GL+ E + R++ GPN L +K + + +
Sbjct: 2 SSLEDIKNET-VDLEKIPIEEVFQQLKCSRE-GLTTQEGEDRIQIFGPNKLEEK-KESKL 58
Query: 162 YVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFY 221
+G+++ S ++ A+++ + P D I+ L ++ SF
Sbjct: 59 LKFLGFMWNPLSWVMEMAAIMAIALANGDGR-----PPDWQDFVGIICLL-VINSTISFI 112
Query: 222 QERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ 281
+E + + + + + V+R+G E ++A LV GDIV +K+GD +PAD RL+E
Sbjct: 113 EENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGD 172
Query: 282 DLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGK 341
LK + S+LTGE PVT G VF + G + VVI TG +T GK
Sbjct: 173 PLKVDQSALTGESLPVTKHPG----------QEVFSGSTCKQGEIEAVVIATGVHTFFGK 222
Query: 342 IAGLTNRLEKKTTPIEQEVQHFMR-LISMWALTLGAICFLLALYIGYNWLNACVYVIGII 400
A L + + ++ + I A+ + ++ + + ++ ++
Sbjct: 223 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLL 281
Query: 401 VANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTV 460
+ +P + L+V++ + + RL+ + I +R+ +E + + +C+DKTGTLT NK++V
Sbjct: 282 IGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 341
Query: 461 LHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASG 520
KN V+V + E + ++ A + S+ E +
Sbjct: 342 -----------DKNLVEVFCKGVEKD----QVLLFAAMASRVE---------------NQ 371
Query: 521 DATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPE 580
DA + ++ + ++ R +V +PFN ++K + + + KGAPE
Sbjct: 372 DAIDAAMVGM----LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPE 427
Query: 581 VIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFK- 639
I+E + + ++ I +A +G R LA A +
Sbjct: 428 QILELAK-----------ASNDLSKKVLSIIDKYAERGLRSLAVA------------RQV 464
Query: 640 FSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK 699
P + + +GL+ L+DPPR + I G+ V M+TGD K +
Sbjct: 465 VPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 524
Query: 700 CHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI 759
+ + + + +++++E FA P K IV+ Q I
Sbjct: 525 LGMGTNMYPSSALLGTHKDANLASIPVEELIEKAD--GFAGVFPEHKYEIVKKLQERKHI 582
Query: 760 VAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDN 819
V +TGDGVNDAPALKKADIGIA+ ++ ++ +D++L + + I+ + R IF
Sbjct: 583 VGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQR 641
Query: 820 LKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNI 879
+K Y ++ I + F+ + S VL I + D ++++ ++ +
Sbjct: 642 MKNYTIYAVSITIRIVFGFMLIALIW-EFDFSAFMVLIIAILNDG-TIMTISKDRVKP-- 697
Query: 880 MSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDP 928
S P + + + +V LG + + + ++ + +
Sbjct: 698 -SPTPDSWKLKEIFATGVV------LGGYQAIMTVIFFW-AAHKTDFFS 738
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 633 bits (1636), Expect = 0.0
Identities = 202/896 (22%), Positives = 373/896 (41%), Gaps = 104/896 (11%)
Query: 45 MSSATKNNYFEKLSTQSKTFFNTRKASLEKKSHPRFVLDCSKKSILRFIHKEKEMDVAQL 104
M+ + + + F+ + A V D + I I + D
Sbjct: 1 MADHSASGAPALSTNIESGKFDEKAAEAAAYQPKPKVEDDEDEDIDALIEDLESHDGHDA 60
Query: 105 RDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVL 164
+ + E + E++ L T GL+ EV +R K G N + ++ + N+
Sbjct: 61 EEEEEEATPGGGRVVPEDM---LQTDTRVGLTSEEVVQRRRKYGLNQMKEE-KENHFLKF 116
Query: 165 VGYIFRG-FSALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQE 223
+G+ F G ++ A+L+ E D G+I L + + F QE
Sbjct: 117 LGF-FVGPIQFVMEGAAVLAAGL---------EDWVD---FGVICGLLLLN-AVVGFVQE 162
Query: 224 RKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD- 282
++ I + K + +A V+R+G++KEI++ +V GDI+ ++ G +PAD R++
Sbjct: 163 FQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAF 222
Query: 283 LKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKI 342
L+ + S+LTGE V G + VF S+ + G V+ TG NT +G+
Sbjct: 223 LQVDQSALTGESLAVDKHKG----------DQVFASSAVKRGEAFVVITATGDNTFVGRA 272
Query: 343 AGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVA 402
A L N + + + ++ + + I ++ + Y + + + I +
Sbjct: 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITII 332
Query: 403 NVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLH 462
VP GL A +T ++ + A LA K IV++L +E+L + +C+DKTGTLT+NK+++
Sbjct: 333 GVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSL-- 390
Query: 463 LSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522
+ Y V GVD + L+ ACL + + K DA
Sbjct: 391 ----HDPYTV-AGVDPE-----------DLMLTACLAASRK-------------KKGIDA 421
Query: 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVI 582
+ L ++ + V + + + PF+ ++K + V SP + +KGAP +
Sbjct: 422 IDKAFLKSLK-YYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFV 480
Query: 583 MERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFST 642
++ ++ + E ++K+ FA++G R L A K
Sbjct: 481 LKTVE-------EDHPIPEEVDQAYKNKVAEFATRGFRSLGVA------------RKRGE 521
Query: 643 DPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHI 702
+G++ DPPR + G+ + M+TGD A+ + + +
Sbjct: 522 GSWEI-------LGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 703 LSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAV 762
+ + + E+ D +E FA P K +VE+ Q +VA+
Sbjct: 575 GTNI-YNAERLGLGGGGDMPGSEVYDFVEAAD--GFAEVFPQHKYNVVEILQQRGYLVAM 631
Query: 763 TGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKK 822
TGDGVNDAP+LKKAD GIA+ S+ ++ AD++ + +I+ ++ R IF +
Sbjct: 632 TGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYA 690
Query: 823 SIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSR 882
+ Y +A +I + FL + ++ V+ I + D+ +++AY+ S+
Sbjct: 691 YVVYRIALSI-HLEIFLGLWIAILNRSLNIELVVFIAIFADV-ATLAIAYDNAP---YSQ 745
Query: 883 EPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSW 938
P L G ++ LG++ + ++T MY G + + N
Sbjct: 746 TPVKWNLPKLWGMSVL------LGVVLAVGTWITVT-TMYAQGENGGIVQNFGNMD 794
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 3e-35
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 33/169 (19%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
I ++ D PRP + D ++ G+++I+++GD K ++ + +I
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI---------- 175
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
E ++ SP K+RI+E + V + GDGVNDA A
Sbjct: 176 ----------QE------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLK 821
L AD+ +AMG G ++SK AD+IL+ ++ +++ I+ + + + +
Sbjct: 214 LALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 9e-33
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 34/169 (20%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
+ G+I+L D RP +AI GI+ +M+TGD+ AK +A + +
Sbjct: 134 EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL---------- 183
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
D+ FA P +K V+ Q + A+ GDGVNDAPA
Sbjct: 184 ----------DD------------YFAEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPA 220
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLK 821
L +AD+GIA+G G++V+ +TAD++L+ ++ + +E R +
Sbjct: 221 LAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 4e-32
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 46/216 (21%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
+ + L+ + DP + + P+ I ++GI ++M+TGD TA+A+A I
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI---------- 593
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
+ V A P K RIV + IVA+ GDGVNDAPA
Sbjct: 594 ----------KK------------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPA 631
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNI 832
L KADIGIAMG TG++V+ ++A + L+ + I N+++++ + N+
Sbjct: 632 LAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNV 690
Query: 833 PEILPF---LFYIFLGIPL-PV--------STVTVL 856
+ P + Y G+ L P+ S+V+V+
Sbjct: 691 LGV-PLAAGVLYPLTGLLLSPMIAAAAMALSSVSVI 725
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-06
Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 243 VIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLG 302
+ +GS +E+ + GD++ ++ G+K+P D + E + E S +TGE PV
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDE-SMVTGEPIPVAKEAS 288
Query: 303 ATNSFAVESRNLVFFSTNLVSGSGKGVVILT--GSNTVMGKIAGLTNRLEKKTTPIEQEV 360
A V +T ++ +G V+ GS+T++ +I + + ++ PI
Sbjct: 289 AK----------VIGAT--INQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPI---- 332
Query: 361 QHFMRLISMW----ALTLGAICFLLALYIGY--NWLNACVYVIGIIVANVPEGL-LATLT 413
Q +S W + + + F++ +G + + +++ P L LAT
Sbjct: 333 QRLADTVSGWFVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPM 392
Query: 414 VSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTV 460
S+ + + A +++ + +E + + T+ DKTGTLT+ +
Sbjct: 393 -SIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL 438
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-31
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 34/169 (20%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
R+ G+I++ D + + A+ + GI+V M+TGD+ +A+AI+ + ++
Sbjct: 153 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------- 202
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
D V A P QK V+ Q+ E+VA GDG+NDAPA
Sbjct: 203 ----------DL------------VIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPA 239
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLK 821
L +AD+GIA+G +GS+V+ ++ D++L+ D+ +V I+ R +K
Sbjct: 240 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-31
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 47/216 (21%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
R+ G+I++ D + + A+ + GI+V M+TGD+ +A+AI+ + ++
Sbjct: 447 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------- 496
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
D V A P QK V+ Q+ E+VA GDG+NDAPA
Sbjct: 497 ----------DL------------VIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPA 533
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNI 832
L +AD+GIA+G +GS+V+ ++ D++L+ D+ +V I+ R +K++I + L N+
Sbjct: 534 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNV 592
Query: 833 PEILPF---LFYIFLGIPL-PV--------STVTVL 856
I P L Y G+ P S+V+V+
Sbjct: 593 ILI-PAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVV 627
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 3e-10
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 26/231 (11%)
Query: 238 PTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPV 297
A VIR+G + + GDIV+++ G+K+P D ++E + E S ++GE PV
Sbjct: 132 AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDE-SMISGEPVPV 190
Query: 298 TCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILT--GSNTVMGKIAGLTNRLEKKTTP 355
+ G VF +T ++ +G + T G T++ +I L P
Sbjct: 191 LKSKGDE----------VFGAT--INNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPP 238
Query: 356 IEQEVQHFMRLISMW----ALTLGAICFLLALYIGY-NWLNACVYVIGIIVANVPEGL-L 409
I Q + + L + F+ +I + L A +I ++V P L
Sbjct: 239 I----QRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGL 294
Query: 410 ATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTV 460
AT T +LT+ + A +++ +E + + DKTGTLT+ K V
Sbjct: 295 ATPT-ALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 344
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-29
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 47/216 (21%)
Query: 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV 712
R+ G+I++ D + + A+ + GI+V M+TGD+ +A+AI+ + ++
Sbjct: 525 RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------- 574
Query: 713 FTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPA 772
D V A P QK V+ Q+ E+VA GDG+NDAPA
Sbjct: 575 ----------DL------------VIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPA 611
Query: 773 LKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNI 832
L +AD+GIA+G +GS+V+ ++ D++L+ D+ +V I+ R +K++I + L N+
Sbjct: 612 LAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNV 670
Query: 833 PEILPF---LFYIFLGIPL-PV--------STVTVL 856
I P L Y G+ P S+V+V+
Sbjct: 671 ILI-PAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVV 705
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 2e-10
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 26/231 (11%)
Query: 238 PTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPV 297
A VIR+G + + GDIV+++ G+K+P D ++E + E S ++GE PV
Sbjct: 210 AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDE-SMISGEPVPV 268
Query: 298 TCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILT--GSNTVMGKIAGLTNRLEKKTTP 355
+ G VF +T ++ +G + T G T++ +I L P
Sbjct: 269 LKSKGDE----------VFGAT--INNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPP 316
Query: 356 IEQEVQHFMRLISMW----ALTLGAICFLLALYIGY-NWLNACVYVIGIIVANVPEGL-L 409
I Q + + L + F+ +I + L A +I ++V P L
Sbjct: 317 I----QRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGL 372
Query: 410 ATLTVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTV 460
AT T +LT+ + A +++ +E + + DKTGTLT+ K V
Sbjct: 373 ATPT-ALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 422
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 4e-21
Identities = 28/180 (15%), Positives = 61/180 (33%), Gaps = 32/180 (17%)
Query: 490 KTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVT 549
+ ++ +A L S + + + +L +S + + + + K+
Sbjct: 16 ERVLHSAWLNSHYQ-------------TGLKNLLDTAVLEGTDE--ESARSLASRWQKID 60
Query: 550 EVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELED 609
E+PF+ + V + L+ KGA + I+ C+ + + + L +++
Sbjct: 61 EIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVPLDDIMLRKIKR 119
Query: 610 KIKLFASKGERVLAFADLHLGQNNFPVNFK-FSTDPMNFPS---SGFRLIGLISLYDPPR 665
+G RV+A A K ++ S L G I+ D
Sbjct: 120 VTDTLNRQGLRVVAVA------------TKYLPAREGDYQRADESDLILEGYIAFLDHHH 167
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.3 bits (166), Expect = 9e-12
Identities = 92/629 (14%), Positives = 165/629 (26%), Gaps = 222/629 (35%)
Query: 462 HLSF--------NREIYHV-----KNGVDV-DIQNFE----TNTTYKTLVRAA------- 496
H+ F ++I V + D D+Q+ + ++ +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65
Query: 497 ----CLCSKAE-----F-----EPN----QDNIPMRERKASGDATEVGILHFIQPRIKSI 538
L SK E F N I +R+ S +I+ R +
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM-----YIEQRDRLY 120
Query: 539 QDVRNTFPK--VT-EVPFNSLNKFHLTVHFSPLNKYFLL--MKGAPEVIMERCTTMMAES 593
D + F K V+ P+ L + L P K L+ + G S
Sbjct: 121 NDNQ-VFAKYNVSRLQPYLKLRQ-ALL-ELRP-AKNVLIDGVLG---------------S 161
Query: 594 DKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPV---NFKFSTDPMNFPSS 650
K + + V + + +F + N K P
Sbjct: 162 GKTW-VALD------------------VCLSYKVQC-KMDFKIFWLNLKNCNSPET---- 197
Query: 651 GFRLIGLISLY---DPPRPAVPDAIDA----CH--KAGIRVIMVTGDHP-C--------- 691
L L L DP + D H +A +R ++ + + C
Sbjct: 198 --VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 692 --TAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749
A + C IL T+ V T L T
Sbjct: 256 AKAWNAFNLSCKILL-TTRFKQVTDFLSAATTTHISLDHHSMT----------------- 297
Query: 750 VELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809
+ + ++ D P + I + D + DN+
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR----DGLATWDNWK----- 348
Query: 810 IEEGRLIFDNLKKSIAYILASNIPEILPFLFY---IF-LGIPLPVSTVTVLCIDLGTDMW 865
+ D L I L P +F +F +P +L + +W
Sbjct: 349 ----HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI---LLSL-----IW 396
Query: 866 PAV---------------SLAYEKPESNIMS---------REPRNPRTDHLVGRKLVT-- 899
V SL ++P+ + +S + N H R +V
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH---RSIVDHY 453
Query: 900 ------------------YAYFHLGI-LETL--AGFLTYFHVMY-DAGWDPMDLLNIRKS 937
Y Y H+G L+ + +T F +++ D + + + +
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA 513
Query: 938 WES----NNNLED--SYHKMWTRTERTWT 960
W + N L+ Y + +
Sbjct: 514 WNASGSILNTLQQLKFYKPYICDNDPKYE 542
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 4e-06
Identities = 105/658 (15%), Positives = 202/658 (30%), Gaps = 200/658 (30%)
Query: 2 KDETTV--FQEA--QPPYD----SKRNSSRG-SRKKKSWSSKHNTTKDVNIYMSSATKNN 52
K E V F E + Y + R S + + + + +Y N
Sbjct: 74 KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-----RLY----NDNQ 124
Query: 53 YFEKLS-TQSKTFFNTRKASLEKKSHPRFVLD----CSK----KSILRFIHKEKEMD--V 101
F K + ++ + + R+A LE + ++D K + + +MD +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184
Query: 102 AQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNV 161
L +LKN + L L++L +D P+ + D +++ RI+++
Sbjct: 185 FWL-NLKNCNSPETVLEMLQKLLYQID--PN--WTSRS-------DHSSNIKL--RIHSI 230
Query: 162 YVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNLW-LGIILA--LTC--IVTG 216
+ R + + LL +L N+ A L+C ++T
Sbjct: 231 Q---AELRRLLKSKPYENCLL-----VL----------LNVQNAKAWNAFNLSCKILLT- 271
Query: 217 MFSFYQERKSSHITESFAKMIPTRATVI-RNGSVKEIDSAGLVRGDIVLLKIGDKVPADI 275
R +T+ + T ++ + ++ + L LLK D
Sbjct: 272 ------TRFKQ-VTDFLSAATTTHISLDHHSMTLTPDEVKSL------LLKYLD------ 312
Query: 276 RLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGS 335
QDL E + P ++ A R+ + N K V
Sbjct: 313 --CRPQDLPREVLT----TNPRRLSI-----IAESIRDGLATWDNW-----KHV----NC 352
Query: 336 NTVMGKIAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVY 395
+ + I N LE P E + F RL ++ F +
Sbjct: 353 DKLTTIIESSLNVLE----PAEYR-KMFDRL---------SV-FP------PS------- 384
Query: 396 VIGIIVANVPEGLLATL-----TVSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKT 450
A++P LL+ + + + +L + + ++ + E+ SI +I +
Sbjct: 385 ------AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK--ESTISIPSIYLEL- 435
Query: 451 GTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDN 510
+ LH R I VD Y S P D
Sbjct: 436 -KVKLENEYALH----RSI------VD----------HYNIP---KTFDSDDLIPPYLDQ 471
Query: 511 -----IP--MRERKASGDATEVGI----LHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKF 559
I ++ + T + F++ +I+ N + L +
Sbjct: 472 YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT-LQQLKFY 530
Query: 560 --HLTVHFSPLNKYFL------LMKGAPEVIMERCT-----TMMAESDKEAFLTAEKK 604
++ + P + + L K +I + T +MAE + F A K+
Sbjct: 531 KPYICDN-DPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDE-AIFEEAHKQ 586
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 14/119 (11%), Positives = 38/119 (31%), Gaps = 8/119 (6%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKIT 722
R + + ++ I +++G +L D ++
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVY------PLLEGIVEKDRIYC-NHA-SFD 128
Query: 723 DEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781
++ + + + + K ++ ++ + + GD V D A K +D+ A
Sbjct: 129 NDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 6e-08
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 19/123 (15%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS----SDDNVFTGTDL 718
P + + G + +++G + + + + S DNV T
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNIT 238
Query: 719 RKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778
I + K +T +L +L I + + I+A GDG ND P L+ A
Sbjct: 239 LPIMNAANK--KQTLVDLA-------ARLNI-----ATENIIAC-GDGANDLPMLEHAGT 283
Query: 779 GIA 781
GIA
Sbjct: 284 GIA 286
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 19/123 (15%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA----IKCHILSETSSDDNVFTGTDL 718
P + + A + +V+ +G + + +++ G
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVT 134
Query: 719 RKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778
+ K E L + L I S + V GDG ND K A I
Sbjct: 135 GHMMFSHSK--GEMLLVLQ-------RLLNI-----SKTNTLVV-GDGANDLSMFKHAHI 179
Query: 779 GIA 781
IA
Sbjct: 180 KIA 182
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 6e-07
Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 37/164 (22%)
Query: 664 PRPAVPDAIDACHKAGIRVIMVTGD-------HPCTAKAIAIKCHILSETSSDDNVFTGT 716
P +++ + V + + P + I H + + +F
Sbjct: 93 PAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERK 152
Query: 717 DLRKI----TDEELKDILETNKELVFARTSP-------------------LQKLRIVELY 753
+ ++ +E + ++ L R P R+
Sbjct: 153 ECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRV---- 208
Query: 754 QSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
+ EI+A GDG ND P LK A IG+AMG +V + AD +
Sbjct: 209 -KVSEIMAC-GDGGNDIPMLKAAGIGVAMGNASEKV-QSVADFV 249
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 8e-07
Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 30/160 (18%)
Query: 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA------IAIKCHILSETSSDDNVFTGTD 717
R V + HK G ++ + + + +++ + D + D
Sbjct: 83 RREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKD 142
Query: 718 LRKI----TDEELKDILETNKELVFARTSP---------------LQKLRIVELYQ-SLD 757
+ + EE + + E F R ++ + +E
Sbjct: 143 IYQALLFCRAEEEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMM--IEKLGIDKK 200
Query: 758 EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
++ A GDG+ND L G+AMG EV K+ AD +
Sbjct: 201 DVYAF-GDGLNDIEMLSFVGTGVAMGNAHEEV-KRVADFV 238
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 8e-07
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 19/123 (15%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGD-HPCT---AKAIAIKCHILSETSSDDNVFTGTDL 718
P P +P+ + H G +V + +G + + +++ + TG L
Sbjct: 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVL 237
Query: 719 RKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778
++ + K + L Q+ + + VAV GDG ND + A +
Sbjct: 238 GEVVSAQTK--ADILLTLA-------QQYDV-----EIHNTVAV-GDGANDLVMMAAAGL 282
Query: 779 GIA 781
G+A
Sbjct: 283 GVA 285
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 8e-07
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 238 PTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPV 297
A VIR+G + + GDIV+++ G+K+P D ++E + E S ++GE PV
Sbjct: 11 AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDE-SMISGEPVPV 69
Query: 298 TCTLGAT 304
+ G
Sbjct: 70 LKSKGDE 76
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 27/123 (21%), Positives = 42/123 (34%), Gaps = 19/123 (15%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGD-HPCT---AKAIAIKCHILSETSSDDNVFTGTDL 718
P + + G +V+G A+ + + +E D TG +
Sbjct: 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVV 315
Query: 719 RKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778
I D K +E Q+ + + + VAV GDG ND L A +
Sbjct: 316 GPIIDRAGK--ATALREFA-------QRAGV-----PMAQTVAV-GDGANDIDMLAAAGL 360
Query: 779 GIA 781
GIA
Sbjct: 361 GIA 363
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 37/164 (22%)
Query: 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTA-------KAIAIKCHILSETSSDDNVFTGT 716
P+ V C K G+ I V + K H+ + +
Sbjct: 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNK 145
Query: 717 DLRKI----TDEELKDILETNKELVFARTSP-------------------LQKLRIVELY 753
++ ++ T+EE K++L + R P ++ I
Sbjct: 146 EVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGI---- 201
Query: 754 QSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
L+E ++ GDG ND L+ A IG+AMG +V K AD +
Sbjct: 202 -KLEETMSF-GDGGNDISMLRHAAIGVAMGQAKEDV-KAAADYV 242
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 7e-06
Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 27/127 (21%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTG------DHPCTAKAIAIKCHILSETSSDDNVFTGT 716
P + I G V +V+G + + + + + D TG
Sbjct: 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNK--IKEKLGLDYAFANRLIVKDGKLTGD 133
Query: 717 DLRKITDEELK-DILETNKELVFARTSPLQKLRIVELYQ-SLDEIVAVTGDGVNDAPALK 774
++ E K +ILE +I ++ +L++ VAV GDG ND K
Sbjct: 134 VEGEVLKENAKGEILE----------------KIAKIEGINLEDTVAV-GDGANDISMFK 176
Query: 775 KADIGIA 781
KA + IA
Sbjct: 177 KAGLKIA 183
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 7e-06
Identities = 33/193 (17%), Positives = 61/193 (31%), Gaps = 68/193 (35%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA----IKCHILSE-----TSSDDNVFTGT 716
+AI GI +++VTG+ A+A + +++E + +F +
Sbjct: 23 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLAS 82
Query: 717 ---------DLRK------------------------ITDEELKDILETNKELVFARTSP 743
++RK I E +++I+ + A S
Sbjct: 83 MDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSG 142
Query: 744 -------------------LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI 784
+ L I E+ V GDG ND A K +A+
Sbjct: 143 FAIHVKKPWINKGSGIEKASEFLGI-----KPKEVAHV-GDGENDLDAFKVVGYKVAVA- 195
Query: 785 TGSEVSKQTADMI 797
++ K+ AD +
Sbjct: 196 QAPKILKENADYV 208
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 2e-05
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 238 PTRATVIRNGSV------KEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLT 291
T AT++ S +++D + RGDI+ + G K P D R+IE + E S +T
Sbjct: 17 ATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDE-SLIT 75
Query: 292 GEVEPVTCTLGAT 304
GE PV G+T
Sbjct: 76 GEAMPVAKKPGST 88
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 30/188 (15%), Positives = 51/188 (27%), Gaps = 60/188 (31%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA-----------------------IKCHI 702
++I + K G+ V +++G+ A+ IK
Sbjct: 25 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFF 84
Query: 703 LSET---------------SSDDNVFTGTDLRKITDEELKDIL--ETNKELVFARTSP-- 743
+E S N + D E D + E S
Sbjct: 85 SNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYS 144
Query: 744 -------------LQKLRIVELYQ-SLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEV 789
+ KL E+Y DEI+ + GD ND P + ++
Sbjct: 145 WHLMNRGEDKAFAVNKL--KEMYSLEYDEILVI-GDSNNDMPMFQLPVRKACPA-NATDN 200
Query: 790 SKQTADMI 797
K +D +
Sbjct: 201 IKAVSDFV 208
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 2e-04
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 26/93 (27%)
Query: 724 EELKDILETNKELVFARTSP-------------------LQKLRIVELYQSLDEIVAVTG 764
+E+KDIL+ EL S ++L + + E + G
Sbjct: 170 DEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGV-----TQKETICF-G 223
Query: 765 DGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
DG ND + +D+ IAM + ++ K A I
Sbjct: 224 DGQNDIVMFQASDVTIAMKNSHQQL-KDIATSI 255
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 961 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.91 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.92 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.92 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.91 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.89 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.81 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.38 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.24 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.14 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.11 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.09 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.08 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.03 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.02 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.98 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.9 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.87 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.83 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.83 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.82 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.82 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.8 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.79 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.77 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.75 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.75 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.74 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.69 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.67 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.66 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.63 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.59 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.59 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.51 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.44 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.39 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.38 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.35 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.33 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.32 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.32 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.31 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.27 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.27 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.21 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.2 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.14 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.14 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.11 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.09 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.09 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.09 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.08 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.07 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.99 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.98 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.97 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.93 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.92 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.91 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.89 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.89 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.85 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.85 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.81 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.8 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.79 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.78 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.78 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.78 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.77 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.76 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 97.75 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.74 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.73 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.71 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.71 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.67 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.66 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.65 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.65 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.62 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.59 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.57 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.57 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.56 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.53 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.5 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.48 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.48 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.48 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.45 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.44 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.44 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.44 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.43 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.39 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.38 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.38 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.38 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.34 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.26 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.24 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.97 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.9 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.86 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.84 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.83 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.8 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.6 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.52 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.49 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.42 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.33 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.17 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.16 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.85 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.75 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.72 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.72 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.67 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.58 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.43 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.42 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.97 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 94.84 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.83 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.62 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 94.41 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.22 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.19 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.1 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.91 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 92.98 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.81 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.22 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 90.32 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.17 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 86.73 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 85.51 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 85.25 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 83.98 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 82.17 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 81.62 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-138 Score=1312.56 Aligned_cols=856 Identities=47% Similarity=0.790 Sum_probs=779.4
Q ss_pred HHHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHH
Q psy6866 102 AQLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGAL 181 (961)
Q Consensus 102 ~~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ai 181 (961)
++++.++++.+++||..+.+++++.|+|++.+|||++|+++|+++||+|++++++++++|+.|+++|+++|.++||++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~ 119 (1034)
T 3ixz_A 40 EKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAA 119 (1034)
T ss_pred hhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHH
Confidence 46778888889999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccce
Q psy6866 182 LSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGD 261 (961)
Q Consensus 182 ls~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GD 261 (961)
++++.+++.....+..+.++++.+++++++++++++++++||+|+++++++++++.+++++|+|||++++|+++||||||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GD 199 (1034)
T 3ixz_A 120 ICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGD 199 (1034)
T ss_pred HHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCc
Confidence 98877655433333333356778888889999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhh
Q psy6866 262 IVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGK 341 (961)
Q Consensus 262 IV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~ 341 (961)
||.|++||+|||||+|++++++.||||+|||||.|+.|.+++....+++.+|++|+||.+.+|++.++|++||.+|.+|+
T Consensus 200 iV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~Gk 279 (1034)
T 3ixz_A 200 LVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGR 279 (1034)
T ss_pred EEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhH
Confidence 99999999999999999999999999999999999999998877778888999999999999999999999999999999
Q ss_pred HHhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHH
Q psy6866 342 IAGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAK 421 (961)
Q Consensus 342 i~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~ 421 (961)
|++++...+.+++|+++.++++..+++.+++++++++++++++.+.+|...+.+++++++++|||+||++++++++++++
T Consensus 280 I~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~ 359 (1034)
T 3ixz_A 280 IASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAK 359 (1034)
T ss_pred HHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHH
Confidence 99999998999999999999999999999998888888888888889999999999999999999999999999999999
Q ss_pred HhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccC-CchHHHHHHHHHHHcc
Q psy6866 422 RLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCS 500 (961)
Q Consensus 422 ~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~c~ 500 (961)
||+++|++||+++++|+||++++||||||||||+|+|+|.++++++..+..+.........++ ....+..++.++++||
T Consensus 360 rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~ 439 (1034)
T 3ixz_A 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCN 439 (1034)
T ss_pred HHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998876654433222222222 2345677889999999
Q ss_pred CceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcC---CCeEEEEEeC
Q psy6866 501 KAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP---LNKYFLLMKG 577 (961)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~---~~~~~~~~KG 577 (961)
++.+..+...+|...+...|+|+|.|+++++...+.+....+..++.+.++||+|.||+|++++... ++++.+++||
T Consensus 440 ~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KG 519 (1034)
T 3ixz_A 440 RAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKG 519 (1034)
T ss_pred cceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeC
Confidence 9988776666677777889999999999999887777777888999999999999999998887653 3678999999
Q ss_pred ChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEee
Q psy6866 578 APEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGL 657 (961)
Q Consensus 578 a~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~ 657 (961)
|||.|+++|+.... +|...+++++.++.+.+.++.++.+|+||+++|++.++.++++.+...+.+..++.|+||+|+|+
T Consensus 520 Ape~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGl 598 (1034)
T 3ixz_A 520 APERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGL 598 (1034)
T ss_pred ChHHHHHHhHHhhc-CCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEE
Confidence 99999999998876 77888999999999999999999999999999999998776655544555555667899999999
Q ss_pred eeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---------------------CceeEech
Q psy6866 658 ISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------------------DDNVFTGT 716 (961)
Q Consensus 658 i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------------------~~~v~~g~ 716 (961)
++++||+|++++++|++|+++||+|+|+|||+..+|.++|+++||..++.. ...+++|.
T Consensus 599 v~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGM 678 (1034)
T ss_pred EeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecH
Confidence 999999999999999999999999999999999999999999999764321 13588999
Q ss_pred hhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccce
Q psy6866 717 DLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM 796 (961)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~ 796 (961)
++..++++++.+.....+..+|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++||+|||||++|++.+|++||+
T Consensus 679 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 679 QLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred hhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 99999999999998888778999999999999999999999999999999999999999999999998999999999999
Q ss_pred EeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCC
Q psy6866 797 ILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPE 876 (961)
Q Consensus 797 vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~ 876 (961)
|+.++++++|+.++++||++|+|++|++.|.+++|+.++++++++.+++.|+|++|+|+||+|+++|++|+++|++|||+
T Consensus 759 Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~ 838 (1034)
T 3ixz_A 759 ILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAE 838 (1034)
T ss_pred EeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccccccCCC--CccccccCccccc
Q psy6866 877 SNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTR 954 (961)
Q Consensus 877 ~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 954 (961)
+++|+||||+++.+++++++++...++++|+++++++|++||+.+...||.+..++++...|.+. .++.+.||++|++
T Consensus 839 ~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (1034)
T 3ixz_A 839 SDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTF 918 (1034)
T ss_pred hhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccch
Confidence 99999999987778999999988888888999999999999999999999999999998889876 5677899999999
Q ss_pred cccc
Q psy6866 955 TERT 958 (961)
Q Consensus 955 ~~~~ 958 (961)
.++.
T Consensus 919 ~~~~ 922 (1034)
T 3ixz_A 919 GQRL 922 (1034)
T ss_pred hhhh
Confidence 8764
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-135 Score=1279.86 Aligned_cols=852 Identities=51% Similarity=0.844 Sum_probs=764.1
Q ss_pred HHHhhccccCccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHH
Q psy6866 103 QLRDLKNEVDIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALL 182 (961)
Q Consensus 103 ~~~~l~~~~~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ail 182 (961)
+.+.++++..++||..+.+++++.|+|++.+|||.+|+++|+++||+|.+++++++|+|+.++++|+++|.++||+++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~l 115 (1028)
T 2zxe_A 36 DLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAIL 115 (1028)
T ss_dssp -CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHH
T ss_pred hHHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35677778889999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHhhhhcccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceE
Q psy6866 183 SFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDI 262 (961)
Q Consensus 183 s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDI 262 (961)
+++.+.+.....+..+.++++.+++++++++++++++++|++|+++.+++++++.+.+++|+|||++++|+++|||||||
T Consensus 116 s~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDi 195 (1028)
T 2zxe_A 116 CFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDL 195 (1028)
T ss_dssp HHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred HHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCE
Confidence 98776554322222334567788888899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhH
Q psy6866 263 VLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKI 342 (961)
Q Consensus 263 V~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i 342 (961)
|.|++||+|||||+|++|+++.||||+|||||.|+.|.+++...++++.+|++|+||.+.+|.+.++|++||.+|.+|+|
T Consensus 196 V~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i 275 (1028)
T 2zxe_A 196 VEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRI 275 (1028)
T ss_dssp EEEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHH
T ss_pred EEECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHH
Confidence 99999999999999999988999999999999999999988777788899999999999999999999999999999999
Q ss_pred HhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHH
Q psy6866 343 AGLTNRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKR 422 (961)
Q Consensus 343 ~~~~~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~ 422 (961)
++++...+.+++|+++.+++++.+++.+++++++++++++++.+.+|...+.+++++++++|||+||++++++++.++.+
T Consensus 276 ~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 276 ATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888877777789999999999999999999999999999999999
Q ss_pred hhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccC-CchHHHHHHHHHHHccC
Q psy6866 423 LASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSK 501 (961)
Q Consensus 423 l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~c~~ 501 (961)
|+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+......+..++ ....++.++.++++||+
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999988776643322111111111 23455678899999999
Q ss_pred ceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcC---CCeEEEEEeCC
Q psy6866 502 AEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP---LNKYFLLMKGA 578 (961)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~---~~~~~~~~KGa 578 (961)
+.++.+..++|...+...|||+|.|+++++...+.+....+..++.+.++||+|.||+|+++++.+ ++++++++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 988766667788777789999999999999876566667778899999999999999999998863 46789999999
Q ss_pred hHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeee
Q psy6866 579 PEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLI 658 (961)
Q Consensus 579 ~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i 658 (961)
||.|+++|+.... +|...+++++.++.+.+.+++++++|+||+++|++.++.++++.+..++.+..+..|.|++|+|++
T Consensus 516 ~e~il~~c~~~~~-~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i 594 (1028)
T 2zxe_A 516 PERILDRCSTILL-NGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLM 594 (1028)
T ss_dssp HHHHHTTEEEECB-TTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEE
T ss_pred cHHHHHHhhhhhc-CCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeee
Confidence 9999999998765 777888999989999999999999999999999999977655443333444445678999999999
Q ss_pred eecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---------------------CceeEechh
Q psy6866 659 SLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---------------------DDNVFTGTD 717 (961)
Q Consensus 659 ~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---------------------~~~v~~g~~ 717 (961)
+++||+|++++++|++|+++||+++|+|||+..||.++|++|||..++.. ...+++|.+
T Consensus 595 ~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~ 674 (1028)
T 2zxe_A 595 AMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSD 674 (1028)
T ss_dssp EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHH
T ss_pred ccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHH
Confidence 99999999999999999999999999999999999999999999854321 146889999
Q ss_pred hccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceE
Q psy6866 718 LRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797 (961)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~v 797 (961)
+..+.+++++++..+++..+|||++|+||..+|+.+|+.|++|+|+|||.||+|||++||||||||++|++++|++||++
T Consensus 675 l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 675 LKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp HTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEE
T ss_pred hhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEE
Confidence 99999999999998887789999999999999999999999999999999999999999999999977999999999999
Q ss_pred eecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCC
Q psy6866 798 LMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPES 877 (961)
Q Consensus 798 l~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~ 877 (961)
+.+++|++|++++++||++|+|+++++.|.+++|+.++++++++.+++.|+|++++|+||+|+++|++|+++|++|+|++
T Consensus 755 l~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~ 834 (1028)
T 2zxe_A 755 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAES 834 (1028)
T ss_dssp ETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSS
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccccccccccCCC--CccccccCcccccc
Q psy6866 878 NIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSWESN--NNLEDSYHKMWTRT 955 (961)
Q Consensus 878 ~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 955 (961)
++|+|||++++.+++++++++..++++.|+++++++|++|+++++..|+.+.+++|+...|... +++.+.+|+.|++.
T Consensus 835 ~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (1028)
T 2zxe_A 835 DIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYE 914 (1028)
T ss_dssp CGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHH
T ss_pred hhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchh
Confidence 9999999987777999999888777788999999999999998888899999999998777554 45667788887654
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-120 Score=1147.52 Aligned_cols=795 Identities=31% Similarity=0.469 Sum_probs=671.5
Q ss_pred cccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhccc
Q psy6866 114 DEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAET 193 (961)
Q Consensus 114 ~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~ 193 (961)
+||..+.+++++.|+|++.+|||.+|+++|+++||+|.++.++++++|+.++++|.+++.++++++++++++.......
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~- 82 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG- 82 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS-
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 5789999999999999999999999999999999999999988889999999999999999999999888776433210
Q ss_pred CCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCe--EEEEECCCcccceEEEecCCCee
Q psy6866 194 NEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGS--VKEIDSAGLVRGDIVLLKIGDKV 271 (961)
Q Consensus 194 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~--~~~I~~~eLv~GDIV~l~~Gd~I 271 (961)
......|+.+++++++++++++++++||+|+++.+++++++.+.+++|+|||+ .++|+++||||||||.|++||+|
T Consensus 83 --~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~I 160 (995)
T 3ar4_A 83 --EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKV 160 (995)
T ss_dssp --SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBC
T ss_pred --ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcc
Confidence 01112355567777788889999999999999999999999999999999987 69999999999999999999999
Q ss_pred eccEEEEe--eCCceeeccCccccccceeccCCCCC---CccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhh
Q psy6866 272 PADIRLIE--IQDLKAENSSLTGEVEPVTCTLGATN---SFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLT 346 (961)
Q Consensus 272 PaD~ill~--g~~l~vdeS~LTGEs~pv~k~~~~~~---~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~ 346 (961)
||||+|++ +++|.||||+|||||.|+.|.+++.. ....+.+|++|+||.+.+|.+.++|++||.+|.+|+|.+++
T Consensus 161 PaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~ 240 (995)
T 3ar4_A 161 PADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 240 (995)
T ss_dssp CSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred cccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHh
Confidence 99999965 45689999999999999999987532 23456789999999999999999999999999999999999
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-----hccHHH----HHHHHHHhhhhccCchhHHHHHHHH
Q psy6866 347 NRLEKKTTPIEQEVQHFMRLISMWALTLGAICFLLALY-I-----GYNWLN----ACVYVIGIIVANVPEGLLATLTVSL 416 (961)
Q Consensus 347 ~~~~~~~s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~-~-----~~~~~~----~~~~~i~vlv~~vP~~L~~a~~~~l 416 (961)
...+.+++|+++.+++++.+++.+++++++++++++.. . +.+|.. .+..++++++++|||+||+++++++
T Consensus 241 ~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~l 320 (995)
T 3ar4_A 241 AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCL 320 (995)
T ss_dssp HTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHH
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHH
Confidence 99899999999999999999988888777776665432 1 122433 4557788999999999999999999
Q ss_pred HHHHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeee---------ecCc-cccccc-----
Q psy6866 417 TLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYH---------VKNG-VDVDIQ----- 481 (961)
Q Consensus 417 ~~~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~---------~~~~-~~~~~~----- 481 (961)
+.++.+|+++|++||+++++|+||++++||||||||||+|+|+|++++..+..+. .+.. ......
T Consensus 321 a~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 400 (995)
T 3ar4_A 321 ALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKND 400 (995)
T ss_dssp HHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETT
T ss_pred HHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccc
Confidence 9999999999999999999999999999999999999999999999987543211 1100 000000
Q ss_pred ---ccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhccccc-c--hh-------------hHh
Q psy6866 482 ---NFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIK-S--IQ-------------DVR 542 (961)
Q Consensus 482 ---~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~-~--~~-------------~~~ 542 (961)
.....+....++.++++||++........ ......|+|+|.|++.++.+.+. . .. ..+
T Consensus 401 ~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~---~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~ 477 (995)
T 3ar4_A 401 KPIRSGQFDGLVELATICALCNDSSLDFNETK---GVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIR 477 (995)
T ss_dssp EECCGGGCHHHHHHHHHHHHSCCCEEEEETTT---TEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHH
T ss_pred ccccccccHHHHHHHHHHHHcCCCcccccCCC---CceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhh
Confidence 00112345678889999998765432211 12345699999999988865432 1 00 235
Q ss_pred hcCCeEEEecCCCCCeeEEEEEEcCCC-----eEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHH--H
Q psy6866 543 NTFPKVTEVPFNSLNKFHLTVHFSPLN-----KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLF--A 615 (961)
Q Consensus 543 ~~~~~~~~~~F~s~~k~~~~v~~~~~~-----~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--a 615 (961)
..+++++++||+|+||+|+++++.+++ ++.+|+|||||.|+++|+.... ++...+++++.++.+.+.++++ +
T Consensus 478 ~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a 556 (995)
T 3ar4_A 478 QLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTG 556 (995)
T ss_dssp HHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHS
T ss_pred hhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHHHHHHHHHHhh
Confidence 568899999999999999999887555 6899999999999999998766 4566788988888999999999 9
Q ss_pred HhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy6866 616 SKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA 695 (961)
Q Consensus 616 ~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ 695 (961)
++|+||+++|+|+++..+..... .+......+|.|++|+|+++++||+|++++++|+.|+++||+++|+|||+..||.+
T Consensus 557 ~~GlRvLa~A~k~~~~~~~~~~~-~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ 635 (995)
T 3ar4_A 557 RDTLRCLALATRDTPPKREEMVL-DDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIA 635 (995)
T ss_dssp TTCCEEEEEEEESSCCCGGGCCT-TCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHH
T ss_pred hccceEEEEEEEecCcccccccc-ccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHH
Confidence 99999999999987542110000 00011123478999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCC-CceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhh
Q psy6866 696 IAIKCHILSETSS-DDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALK 774 (961)
Q Consensus 696 ia~~~gi~~~~~~-~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~ 774 (961)
+|+++||...... ...+++|.++..+.++++.+++.+.. +|||++|+||.++|+.+|++|++|+|+|||.||+|||+
T Consensus 636 ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~--v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk 713 (995)
T 3ar4_A 636 ICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRAC--CFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALK 713 (995)
T ss_dssp HHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCC--EEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHH
T ss_pred HHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCc--EEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHH
Confidence 9999999764322 24689999999999998888887754 99999999999999999999999999999999999999
Q ss_pred hCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHHHHHHHHhcCCchhHHHH
Q psy6866 775 KADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVT 854 (961)
Q Consensus 775 ~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q 854 (961)
+|||||||| +|+++|+++||+++.+++|.+++.++++||++|+|+++++.|.+++|+..++.++++.+++.+.|++|+|
T Consensus 714 ~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~q 792 (995)
T 3ar4_A 714 KAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQ 792 (995)
T ss_dssp HSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHH
T ss_pred HCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHH
Confidence 999999999 9999999999999999999999999999999999999999999999999998888899999999999999
Q ss_pred HHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 855 VLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVM 921 (961)
Q Consensus 855 ~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 921 (961)
+||+|+++|.+|+++|++++|++++|+|||+.+ .+++++++++..+ ...|+++++++++.|++.+
T Consensus 793 il~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~-~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ 857 (995)
T 3ar4_A 793 LLWVNLVTDGLPATALGFNPPDLDIMDRPPRSP-KEPLISGWLFFRY-MAIGGYVGAATVGAAAWWF 857 (995)
T ss_dssp HHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCT-TCCSSCHHHHHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccCCCChhHHhCCCCCC-cccccCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999865 6789999887664 4569999888877666543
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-113 Score=1059.93 Aligned_cols=700 Identities=25% Similarity=0.388 Sum_probs=591.8
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhcccCCCCCCchh
Q psy6866 123 LYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAETNEEKPQDNL 202 (961)
Q Consensus 123 l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~ 202 (961)
+.+.|++++.+|||.+|+++|+++||+|.++.++ .++|..|+.+|.+++.++++++++++++. +.|
T Consensus 76 ~~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~-------------g~~ 141 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGL-------------EDW 141 (920)
T ss_dssp SSTTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTC-------------SCS
T ss_pred HHHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhH
Confidence 3456888888999999999999999999998754 77888999999999988888887665431 223
Q ss_pred hHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC
Q psy6866 203 WLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD 282 (961)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~ 282 (961)
..+.+++++++++++++++|++++++.+++++++.+.+++|+|||++++|+++||||||||.|++||+|||||+|++|++
T Consensus 142 ~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~ 221 (920)
T 1mhs_A 142 VDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA 221 (920)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc
Confidence 44556667778889999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred -ceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHH
Q psy6866 283 -LKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQ 361 (961)
Q Consensus 283 -l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~ 361 (961)
+.||||+|||||.||.|.+++ .+|+||.+.+|.+.++|++||.+|.+|+|.++++..+.+++|+++.++
T Consensus 222 ~l~VDES~LTGES~PV~K~~gd----------~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~ 291 (920)
T 1mhs_A 222 FLQVDQSALTGESLAVDKHKGD----------QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLN 291 (920)
T ss_dssp CCEEBCTTTSSCCCCEECCSSC----------EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHH
T ss_pred eeeeeccccCCCCcceEecCCC----------eeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHH
Confidence 899999999999999999874 599999999999999999999999999999999888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccc
Q psy6866 362 HFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGS 441 (961)
Q Consensus 362 ~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~ 441 (961)
++..++++++++++++.++.+++.+.+|...+.+++++++++|||+||++++++++.++.+|+|+|++||+++++|+||+
T Consensus 292 ~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~ 371 (920)
T 1mhs_A 292 GIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAG 371 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhcc
Confidence 99998888777777666665555566788999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCC
Q psy6866 442 IRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGD 521 (961)
Q Consensus 442 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~ 521 (961)
+|+||||||||||+|+|+|.+++..+. ++. ++++.++++|+... ...++
T Consensus 372 v~vIc~DKTGTLT~n~m~v~~~~~~~g--------------~~~----~~ll~~a~l~~~~~-------------~~~~~ 420 (920)
T 1mhs_A 372 VEILCSDKTGTLTKNKLSLHDPYTVAG--------------VDP----EDLMLTACLAASRK-------------KKGID 420 (920)
T ss_dssp CCEEEEETBTTTBSSCSCCCCCBCCSC--------------CCC----THHHHHHHHSCCCS-------------SCSCC
T ss_pred CcEEEECCCCCccccceeEEEEeecCC--------------CCH----HHHHHHHHHhcCCc-------------ccCCC
Confidence 999999999999999999987754221 001 13566778886431 01148
Q ss_pred hhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCH
Q psy6866 522 ATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTA 601 (961)
Q Consensus 522 ~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~ 601 (961)
|+|.|+++++.+.+. .......++.+..+||+|.+|+|+++++.++|+.++++|||||.|+++|+. ..++++
T Consensus 421 P~e~Al~~~~~~~~~-~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~~~~~ 492 (920)
T 1mhs_A 421 AIDKAFLKSLKYYPR-AKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DHPIPE 492 (920)
T ss_dssp SHHHHHHHHHHHSSS-CCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SSCCCH
T ss_pred hHHHHHHHHHHhccc-chhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cCCCCH
Confidence 999999998764332 122345678899999999999999998776777889999999999999973 224677
Q ss_pred HHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCE
Q psy6866 602 EKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIR 681 (961)
Q Consensus 602 ~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~ 681 (961)
+.++.+.+.+++++.+|+||+++|++. .|.+++|+|+++++||+||+++++|+.|+++||+
T Consensus 493 ~~~~~~~~~~~~~a~~G~RvL~vA~~~-------------------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~ 553 (920)
T 1mhs_A 493 EVDQAYKNKVAEFATRGFRSLGVARKR-------------------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLS 553 (920)
T ss_dssp HHHHHHHHHHHHHHTSSCCCCEECCCS-------------------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEec-------------------cccccEEEEEEEEeccccccHHHHHHHHhhcCce
Confidence 778888899999999999999999752 1467899999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCCC-CCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEE
Q psy6866 682 VIMVTGDHPCTAKAIAIKCHILSET-SSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIV 760 (961)
Q Consensus 682 v~m~TGD~~~ta~~ia~~~gi~~~~-~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V 760 (961)
++|+|||+..||.++|+++||.... ..+..+++|. ..++++++.+.+++.. +|+|++|+||.++|+.+|++|++|
T Consensus 554 v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~--V~arv~P~~K~~iV~~Lq~~g~~V 629 (920)
T 1mhs_A 554 IKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAAD--GFAEVFPQHKYNVVEILQQRGYLV 629 (920)
T ss_dssp EEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTS--CEESCCSTHHHHHHHHHHTTTCCC
T ss_pred EEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCe--EEEEeCHHHHHHHHHHHHhCCCeE
Confidence 9999999999999999999996421 1123345555 3455566666555554 999999999999999999999999
Q ss_pred EEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHH-HHH
Q psy6866 761 AVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEIL-PFL 839 (961)
Q Consensus 761 ~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~-~~~ 839 (961)
+|+|||.||+|||++|||||||| +|+++++++||+++++++|++|+.++++||++|+||++++.|.++.|+...+ ..+
T Consensus 630 am~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~ 708 (920)
T 1mhs_A 630 AMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGL 708 (920)
T ss_dssp EECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 8999999999999999999999999999999999999999999999998643 333
Q ss_pred HHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy6866 840 FYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFH 919 (961)
Q Consensus 840 ~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 919 (961)
+..+++ .|+++.|++|+|+++|. |+++|++|+++++ ++|+++.. ++++..++ ..|++.+++++++|++
T Consensus 709 ~~~~~~--~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~-----~~~~~~~~-~~g~~~~~~~~~~~~~ 776 (920)
T 1mhs_A 709 WIAILN--RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNL-----PKLWGMSV-LLGVVLAVGTWITVTT 776 (920)
T ss_dssp HHHSCS--CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCS-----SSCSSCHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHh--ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchH-----HHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 333344 45899999999999997 9999999998765 67765533 22333322 3577878777777665
Q ss_pred HH
Q psy6866 920 VM 921 (961)
Q Consensus 920 ~~ 921 (961)
.+
T Consensus 777 ~~ 778 (920)
T 1mhs_A 777 MY 778 (920)
T ss_dssp HT
T ss_pred HH
Confidence 54
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-113 Score=1061.21 Aligned_cols=719 Identities=24% Similarity=0.401 Sum_probs=593.5
Q ss_pred CccccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhc
Q psy6866 112 DIDEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEA 191 (961)
Q Consensus 112 ~~~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~ 191 (961)
..++|..+.+++++.|+++ .+|||.+|+++|+++||+|.++.++ .+.|+.|+++|++++.++|+++++++++.....
T Consensus 11 ~~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~- 87 (885)
T 3b8c_A 11 TVDLEKIPIEEVFQQLKCS-REGLTTQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD- 87 (885)
T ss_dssp -CCCSSSSTTCCTTTSSSC-SSCSTHHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-
T ss_pred chhhHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 3678899999999999998 6899999999999999999998876 778888999999999999998887775432110
Q ss_pred ccCCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCee
Q psy6866 192 ETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKV 271 (961)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~I 271 (961)
. ....|+.+++++++++++++++++|++|+++.+++|+++.+.+++|+|||++++|+++||||||||.|++||+|
T Consensus 88 --~---~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 88 --G---RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp --T---SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred --c---ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 0 11234445666677788889999999999999999999999999999999999999999999999999999999
Q ss_pred eccEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccC
Q psy6866 272 PADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEK 351 (961)
Q Consensus 272 PaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~ 351 (961)
||||+|++|+++.||||+|||||.||.|.+++ .+|+||.+.+|.+.++|++||.+|.+|+|.++++. ..
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~----------~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~ 231 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQ----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TN 231 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCC----------CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CS
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCC----------ccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-cc
Confidence 99999999998899999999999999999875 49999999999999999999999999999988876 67
Q ss_pred CCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccc
Q psy6866 352 KTTPIEQEVQHFMRLISM-WALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIV 430 (961)
Q Consensus 352 ~~s~l~~~~~~~~~~l~~-i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilv 430 (961)
+++|+++.++++..++.. ++++++++.++++++.+.+|...+.+++++++++|||+||++++++++.++.+|+|+|++|
T Consensus 232 ~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilv 311 (885)
T 3b8c_A 232 QVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 311 (885)
T ss_dssp CCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCC
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 889999999999877433 3333333333333334457788899999999999999999999999999999999999999
Q ss_pred cccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCC
Q psy6866 431 RRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDN 510 (961)
Q Consensus 431 k~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~ 510 (961)
|+++++|+||++|+||||||||||+|+|+|.+.++. .+ ......++++..+++|+..
T Consensus 312 k~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~-------------~~~~~~~~ll~~aa~~~~~-------- 368 (885)
T 3b8c_A 312 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF-------------CKGVEKDQVLLFAAMASRV-------- 368 (885)
T ss_dssp SSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS-------------CSSTTHHHHHHHHHHHCCS--------
T ss_pred CCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc-------------CCCCCHHHHHHHHHHHhCC--------
Confidence 999999999999999999999999999998632210 00 0001123567788888642
Q ss_pred cccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhccc
Q psy6866 511 IPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMM 590 (961)
Q Consensus 511 ~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~ 590 (961)
..++|+|.|+++++... ...+..++.++.+||+|.+|+|++++...+|++++++|||||.|+++|+..
T Consensus 369 -------~~~~p~~~Al~~~~~~~----~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~- 436 (885)
T 3b8c_A 369 -------ENQDAIDAAMVGMLADP----KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS- 436 (885)
T ss_dssp -------SSCCSHHHHHHHTTCCT----TCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-
T ss_pred -------CCCCchHHHHHHHhhch----hhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-
Confidence 13688999999987531 122345778889999999999988877666778899999999999999631
Q ss_pred ccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHH
Q psy6866 591 AESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPD 670 (961)
Q Consensus 591 ~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~ 670 (961)
++.++.+.+.+++++++|+||+++|++.++.++ .+..|+|++|+|+++++||+||++++
T Consensus 437 ----------~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~-----------~~~~e~~l~~lGli~i~Dp~R~~a~~ 495 (885)
T 3b8c_A 437 ----------NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT-----------KESPGAPWEFVGLLPLFDPPRHDSAE 495 (885)
T ss_dssp ----------STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS-----------SSCCCCCCCCCEEEEECCCCCHHHHH
T ss_pred ----------hhhHHHHHHHHHHHHhCCCeEEEEEEecccccc-----------ccccccCcEEEEEEEeecccchhHHH
Confidence 112334667788999999999999998775431 12347889999999999999999999
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhcc-CCHHHHHHHHHhcCceEEeecCHHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRK-ITDEELKDILETNKELVFARTSPLQKLRI 749 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~-~~~~~~~~~~~~~~~~v~ar~~p~~K~~i 749 (961)
+|++|+++||+++|+|||+..||.++|+++||..+.. ...+++|.++.. +++.++++++++.. +|+|++|+||.++
T Consensus 496 aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-~~~~l~g~~~~~~~~~~~l~~~~~~~~--v~arv~P~~K~~i 572 (885)
T 3b8c_A 496 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSALLGTHKDANLASIPVEELIEKAD--GFAGVFPEHKYEI 572 (885)
T ss_dssp HHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-TTSSCCBGGGGTTSCCSCHHHHHHTSC--CEECCCHHHHHHH
T ss_pred HHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-CcceeeccccccccchhHHHHHHhhCc--EEEEECHHHHHHH
Confidence 9999999999999999999999999999999965321 134567777765 66666777777665 9999999999999
Q ss_pred HHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 750 VELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILA 829 (961)
Q Consensus 750 v~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~ 829 (961)
|+.+|++|++|+|+|||.||+|||++|||||||| +|+++|+++||+++.+++|++|+.++++||++|+||++++.|+++
T Consensus 573 V~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~ 651 (885)
T 3b8c_A 573 VKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651 (885)
T ss_dssp HHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCcccCCCCCCCcccccchhhHHHHHHHHHHHH
Q psy6866 830 SNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESNIMSREPRNPRTDHLVGRKLVTYAYFHLGILE 909 (961)
Q Consensus 830 ~ni~~i~~~~~~~~~~~~~pl~~~q~l~i~li~d~~~~lal~~e~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~ 909 (961)
+|+..++.++... ++.+.|++|+|++|+|+++|..+ +++++|++++. ++|.. . ..++++... ...|+++
T Consensus 652 ~n~~~~~~~~~~~-~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p~~----~-~~~~~~~~~-~~~g~~~ 720 (885)
T 3b8c_A 652 ITIRIVFGFMLIA-LIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTPDS----W-KLKEIFATG-VVLGGYQ 720 (885)
T ss_dssp HTTTTTSTTHHHH-SSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCCCS----T-TTTTTTTTH-HHHHSST
T ss_pred HHHHHHHHHHHHH-HccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCCcc----h-hHHHHHHHH-HHHHHHH
Confidence 9997655444333 46788999999999999999876 89999887552 23321 1 224444432 3468888
Q ss_pred HHHHHHHHHHH
Q psy6866 910 TLAGFLTYFHV 920 (961)
Q Consensus 910 ~~~~~~~~~~~ 920 (961)
++++++.|++.
T Consensus 721 ~~~~~~~~~~~ 731 (885)
T 3b8c_A 721 AIMTVIFFWAA 731 (885)
T ss_dssp HHHHTTSSSCT
T ss_pred HHHHHHHHHHH
Confidence 88877666554
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-82 Score=763.54 Aligned_cols=528 Identities=22% Similarity=0.324 Sum_probs=448.5
Q ss_pred hhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCeEEEEECCCcccceEEEecCCCeeeccEEEEe
Q psy6866 201 NLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIR-NGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIE 279 (961)
Q Consensus 201 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R-~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~ 279 (961)
|+..+.++++++++..+++.++++|+++.++++.++.|.+++++| ||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 187 yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 266 (736)
T 3rfu_A 187 YFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE 266 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE
Confidence 344455666777888888888888888899999999999999988 9999999999999999999999999999999999
Q ss_pred eCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHH
Q psy6866 280 IQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQE 359 (961)
Q Consensus 280 g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~ 359 (961)
|++ .||||+|||||.|+.|.+++. +++||.+.+|.+.++|++||.+|.+|+|.+++...+.+++|+|+.
T Consensus 267 G~~-~VDES~LTGES~Pv~K~~gd~----------v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~ 335 (736)
T 3rfu_A 267 GRS-FVDESMVTGEPIPVAKEASAK----------VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRL 335 (736)
T ss_dssp SCE-EEECSSSTTCSSCEEECTTCE----------ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCH
T ss_pred Cce-EeeecccCCccccEEeccCCc----------CCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHH
Confidence 875 799999999999999999875 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhh
Q psy6866 360 VQHFMRLISMWALTLGAICFLLALYIGY--NWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVE 437 (961)
Q Consensus 360 ~~~~~~~l~~i~~~~~~i~~i~~~~~~~--~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e 437 (961)
+++++.++++++++++++.|++|++.+. .|...+..++++++++|||+|++++++++..+..+++++|++||+++++|
T Consensus 336 ~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE 415 (736)
T 3rfu_A 336 ADTVSGWFVPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALE 415 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHH
Confidence 9999999999999999999998887654 37888999999999999999999999999999999999999999999999
Q ss_pred hccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCccccccc
Q psy6866 438 TLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERK 517 (961)
Q Consensus 438 ~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~ 517 (961)
+||++|+||||||||||+|+|+|.+++.++. ..++++..++.+. .
T Consensus 416 ~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-------------------~~~~~l~~aa~le----------------~ 460 (736)
T 3rfu_A 416 RMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF-------------------VEDNALALAAALE----------------H 460 (736)
T ss_dssp HHTSCCEEEECCBTTTBCSSCEEEEEEESSS-------------------CHHHHHHHHHHHH----------------H
T ss_pred HhcCCCEEEEeCCCCCcCCceEEEEEEecCC-------------------CHHHHHHHHHHHh----------------h
Confidence 9999999999999999999999999873221 0122333333221 1
Q ss_pred ccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCccc
Q psy6866 518 ASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEA 597 (961)
Q Consensus 518 ~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~ 597 (961)
.+.+|.+.|+++++...+.. .....+|++..++..... .+++ .+.+|+++.+.+.+..
T Consensus 461 ~s~hPla~Aiv~~a~~~~~~---------~~~~~~f~~~~g~gv~~~--~~g~--~~~~G~~~~~~~~~~~--------- 518 (736)
T 3rfu_A 461 QSEHPLANAIVHAAKEKGLS---------LGSVEAFEAPTGKGVVGQ--VDGH--HVAIGNARLMQEHGGD--------- 518 (736)
T ss_dssp SSCCHHHHHHHHHHHTTCCC---------CCCCSCCCCCTTTEEEEC--SSSS--CEEEESHHHHHHHCCC---------
T ss_pred cCCChHHHHHHHHHHhcCCC---------ccCcccccccCCceEEEE--ECCE--EEEEcCHHHHHHcCCC---------
Confidence 23468888999988654321 122346777766543322 2232 2456999887654321
Q ss_pred ccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHH
Q psy6866 598 FLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHK 677 (961)
Q Consensus 598 ~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~ 677 (961)
...+.+..+.++.+|+|++++|+ |.+++|+++++|++|++++++|++|++
T Consensus 519 ------~~~~~~~~~~~~~~G~~vl~va~------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~ 568 (736)
T 3rfu_A 519 ------NAPLFEKADELRGKGASVMFMAV------------------------DGKTVALLVVEDPIKSSTPETILELQQ 568 (736)
T ss_dssp ------CHHHHHHHHHHHHTTCEEEEEEE------------------------TTEEEEEEEEECCBCSSHHHHHHHHHH
T ss_pred ------hhHHHHHHHHHHhcCCeEEEEEE------------------------CCEEEEEEEeeccchhhHHHHHHHHHH
Confidence 11345567889999999999983 358999999999999999999999999
Q ss_pred cCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcC
Q psy6866 678 AGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLD 757 (961)
Q Consensus 678 agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g 757 (961)
+|++++|+|||+..+|..+|+++||.. ++++++|++|.++|+.+|++|
T Consensus 569 ~Gi~v~mlTGd~~~~a~~ia~~lgi~~--------------------------------v~a~~~P~~K~~~v~~l~~~g 616 (736)
T 3rfu_A 569 SGIEIVMLTGDSKRTAEAVAGTLGIKK--------------------------------VVAEIMPEDKSRIVSELKDKG 616 (736)
T ss_dssp HTCEEEEECSSCHHHHHHHHHHHTCCC--------------------------------EECSCCHHHHHHHHHHHHHHS
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCE--------------------------------EEEecCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999954 899999999999999999999
Q ss_pred CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 758 EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 758 ~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
+.|+|+|||.||+|||++|||||||| +|++.++++||+++.+++++++++++++||++++||++++.|++.+|++.+..
T Consensus 617 ~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 617 LIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp CCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 89999999999999999999999999999999999999999999999888643
Q ss_pred HH--HHHHhcCC-chhHHHHHHHHH
Q psy6866 838 FL--FYIFLGIP-LPVSTVTVLCID 859 (961)
Q Consensus 838 ~~--~~~~~~~~-~pl~~~q~l~i~ 859 (961)
.. ++.++|+. .|+-+...+..+
T Consensus 696 Aag~l~p~~G~~l~P~~aa~~m~~S 720 (736)
T 3rfu_A 696 AAGVLYPLTGLLLSPMIAAAAMALS 720 (736)
T ss_dssp HHTSSTTTSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhccchhhHHHHHHHHHhh
Confidence 32 22334543 455444333333
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-79 Score=734.71 Aligned_cols=498 Identities=24% Similarity=0.323 Sum_probs=425.2
Q ss_pred HHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCc
Q psy6866 204 LGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDL 283 (961)
Q Consensus 204 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l 283 (961)
.+.++++++.+..+++.++++|+++.++++.++.|.+++|+|||++++|+++||+|||+|.|++||+|||||+|++|++
T Consensus 98 ~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~- 176 (645)
T 3j08_A 98 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176 (645)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-
Confidence 3555566666677777777777777888999999999999999999999999999999999999999999999999875
Q ss_pred eeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHHH
Q psy6866 284 KAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQHF 363 (961)
Q Consensus 284 ~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~~ 363 (961)
.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+|+|.++++..+.+++|+++.++++
T Consensus 177 ~VdeS~LTGES~Pv~K~~g~~----------v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~ 246 (645)
T 3j08_A 177 YVDESMISGEPVPVLKSKGDE----------VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKV 246 (645)
T ss_dssp EEECHHHHCCSSCEEECTTCE----------ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHH
T ss_pred EEEcccccCCCCceecCCCCE----------eeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHH
Confidence 899999999999999998864 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccce
Q psy6866 364 MRLISMWALTLGAICFLLALYI-GYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGSI 442 (961)
Q Consensus 364 ~~~l~~i~~~~~~i~~i~~~~~-~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~v 442 (961)
+.++++++++++++.+++|++. +.+|...+..++++++++|||+|++++++++..++.+++++|++||+++++|+||++
T Consensus 247 ~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v 326 (645)
T 3j08_A 247 VAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKV 326 (645)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCC
Confidence 9999999888888888777554 345667788889999999999999999999999999999999999999999999999
Q ss_pred eEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCCh
Q psy6866 443 RTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDA 522 (961)
Q Consensus 443 ~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~ 522 (961)
|++|||||||||+|+|+|.+++..+. ..++++..++.++. .+.+|
T Consensus 327 ~~i~fDKTGTLT~~~~~v~~~~~~~~-------------------~~~~~l~~aa~~e~----------------~s~hP 371 (645)
T 3j08_A 327 TAVIFDKTGTLTKGKPEVTDLVPLNG-------------------DERELLRLAAIAER----------------RSEHP 371 (645)
T ss_dssp CEEEEEGGGTSSSSCCEEEEEEESSS-------------------CHHHHHHHHHHHHT----------------TCCSH
T ss_pred CEEEEcCcccccCCCeEEEEEEeCCC-------------------CHHHHHHHHHHHhh----------------cCCCh
Confidence 99999999999999999999875431 11235566655532 23467
Q ss_pred hHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHH
Q psy6866 523 TEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAE 602 (961)
Q Consensus 523 ~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~ 602 (961)
.+.|+++++...+..... ......++. ..... ..+.+|+++.+.+... ..
T Consensus 372 la~Aiv~~a~~~g~~~~~----~~~~~~~~g-----~g~~~--------~~v~~g~~~~~~~~~~----------~~--- 421 (645)
T 3j08_A 372 IAEAIVKKALEHGIELGE----PEKVEVIAG-----EGVVA--------DGILVGNKRLMEDFGV----------AV--- 421 (645)
T ss_dssp HHHHHHHHHHHTTCCCCS----CCCCEEETT-----TEEEE--------TTEEEECHHHHHHTTC----------CC---
T ss_pred hHHHHHHHHHhcCCCcCC----ccceEEecC-----CceEE--------EEEEECCHHHHHhcCC----------Cc---
Confidence 888999887754322110 011111111 11100 1245688876644221 11
Q ss_pred HHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCEE
Q psy6866 603 KKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRV 682 (961)
Q Consensus 603 ~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v 682 (961)
+..+.+..+.++.+|+|++++|+ |++++|+++++|++||+++++|++|+++|+++
T Consensus 422 -~~~~~~~~~~~~~~g~~~l~va~------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v 476 (645)
T 3j08_A 422 -SNEVELALEKLEREAKTAVIVAR------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 476 (645)
T ss_dssp -CHHHHHHHHHHHTTTCCCEEEEE------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred -cHHHHHHHHHHHhcCCeEEEEEE------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEE
Confidence 12455667889999999999983 46999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEE
Q psy6866 683 IMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAV 762 (961)
Q Consensus 683 ~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~ 762 (961)
+|+|||+..+|..+|+++|+.. +|++++|++|.++++.++++ +.|+|
T Consensus 477 ~~~TGd~~~~a~~ia~~lgi~~--------------------------------~~~~~~P~~K~~~v~~l~~~-~~v~~ 523 (645)
T 3j08_A 477 GMITGDNWRSAEAISRELNLDL--------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAF 523 (645)
T ss_dssp EEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCTTCHHHHHHHHTTT-CCEEE
T ss_pred EEEeCCCHHHHHHHHHHcCCCE--------------------------------EEEeCCHHhHHHHHHHHhhC-CeEEE
Confidence 9999999999999999999953 89999999999999999988 89999
Q ss_pred EcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHH
Q psy6866 763 TGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEIL 836 (961)
Q Consensus 763 vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~ 836 (961)
+|||.||+|||++||+||||| +|++.++++||+++.+++++++++++++||++++|+++++.|.+++|++.+.
T Consensus 524 vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 596 (645)
T 3j08_A 524 VGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIP 596 (645)
T ss_dssp EECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999988654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-78 Score=741.40 Aligned_cols=500 Identities=24% Similarity=0.319 Sum_probs=427.2
Q ss_pred hHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCC
Q psy6866 203 WLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQD 282 (961)
Q Consensus 203 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~ 282 (961)
..++++++++.+..+++.+.++|+++.++++.++.|.+++|+|||++++|+++||+|||+|.|++||+|||||+|++|++
T Consensus 175 ~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~ 254 (723)
T 3j09_A 175 ETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES 254 (723)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCe
Confidence 33555666666677777777777778889999999999999999999999999999999999999999999999999875
Q ss_pred ceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCCCchHHHHHH
Q psy6866 283 LKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKTTPIEQEVQH 362 (961)
Q Consensus 283 l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~s~l~~~~~~ 362 (961)
.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+|+|.++++..+.+++|+++.+++
T Consensus 255 -~VdeS~LTGES~pv~K~~g~~----------v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~ 323 (723)
T 3j09_A 255 -YVDESMISGEPVPVLKSKGDE----------VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADK 323 (723)
T ss_dssp -EEECHHHHCCSSCEEECTTCE----------ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHH
T ss_pred -EEecccccCCCcceeecCCCe----------eccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHH
Confidence 899999999999999998864 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhcccccccccchhhhccc
Q psy6866 363 FMRLISMWALTLGAICFLLALYI-GYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRLQTVETLGS 441 (961)
Q Consensus 363 ~~~~l~~i~~~~~~i~~i~~~~~-~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~~~~e~lg~ 441 (961)
++.++++++++++++.+++|++. +.+|...+..++++++++|||+|++++++++..++.+++++|++||+++++|+||+
T Consensus 324 ~~~~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~ 403 (723)
T 3j09_A 324 VVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEK 403 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhc
Confidence 99999999888888888777554 44677788899999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCC
Q psy6866 442 IRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGD 521 (961)
Q Consensus 442 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~ 521 (961)
+|++|||||||||+|+|+|.+++..+. ..++++..++.++. .+.+
T Consensus 404 v~~i~fDKTGTLT~g~~~v~~~~~~~~-------------------~~~~~l~~aa~~e~----------------~s~h 448 (723)
T 3j09_A 404 VTAVIFDKTGTLTKGKPEVTDLVPLNG-------------------DERELLRLAAIAER----------------RSEH 448 (723)
T ss_dssp CCEEEEEHHHHTSCSCCEEEEEEESSS-------------------CHHHHHHHHHHHHT----------------TCCS
T ss_pred CCEEEEcCCCccccCceEEEEEEeCCC-------------------CHHHHHHHHHHHhc----------------cCCC
Confidence 999999999999999999999875421 11235555555532 2346
Q ss_pred hhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCH
Q psy6866 522 ATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTA 601 (961)
Q Consensus 522 ~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~ 601 (961)
|.+.|+++++...+..... .......+. ..... ..+.+|+++.+.+.+. ..
T Consensus 449 P~~~Ai~~~a~~~~~~~~~----~~~~~~~~g-----~g~~~--------~~~~~g~~~~~~~~~~----------~~-- 499 (723)
T 3j09_A 449 PIAEAIVKKALEHGIELGE----PEKVEVIAG-----EGVVA--------DGILVGNKRLMEDFGV----------AV-- 499 (723)
T ss_dssp HHHHHHHHHHHHTTCCCCS----CCCCEEETT-----TEEEE--------TTEEEECHHHHHHTTC----------CC--
T ss_pred chhHHHHHHHHhcCCCcCC----ccceEEecC-----CceEE--------EEEEECCHHHHHhcCC----------Cc--
Confidence 7888999887654322110 111111111 10000 1245688877644221 11
Q ss_pred HHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChHHHHHHHHHcCCE
Q psy6866 602 EKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIR 681 (961)
Q Consensus 602 ~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~ 681 (961)
...+.+..+.++.+|+|++++|+ |++++|+++++|++|++++++|+.|+++|++
T Consensus 500 --~~~~~~~~~~~~~~g~~~~~va~------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~ 553 (723)
T 3j09_A 500 --SNEVELALEKLEREAKTAVIVAR------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIK 553 (723)
T ss_dssp --CHHHHHHHHHHHTTTCEEEEEEE------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCE
T ss_pred --cHHHHHHHHHHHhcCCeEEEEEE------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCE
Confidence 12456677889999999999983 4699999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEE
Q psy6866 682 VIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVA 761 (961)
Q Consensus 682 v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~ 761 (961)
++|+|||+..+|..+|+++|+.. +|++++|++|.++|+.++++ +.|+
T Consensus 554 v~~~TGd~~~~a~~ia~~lgi~~--------------------------------~~~~~~P~~K~~~v~~l~~~-~~v~ 600 (723)
T 3j09_A 554 VGMITGDNWRSAEAISRELNLDL--------------------------------VIAEVLPHQKSEEVKKLQAK-EVVA 600 (723)
T ss_dssp EEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCTTCHHHHHHHHTTT-CCEE
T ss_pred EEEECCCCHHHHHHHHHHcCCcE--------------------------------EEccCCHHHHHHHHHHHhcC-CeEE
Confidence 99999999999999999999953 99999999999999999988 8999
Q ss_pred EEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhHHH
Q psy6866 762 VTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILASNIPEILP 837 (961)
Q Consensus 762 ~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~~ni~~i~~ 837 (961)
|+|||.||+|||++|||||||| +|++.++++||+++.++++++++.++++||++++|+++++.|.+++|++.+..
T Consensus 601 ~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 601 FVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp EEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999886543
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-29 Score=272.79 Aligned_cols=140 Identities=29% Similarity=0.519 Sum_probs=131.5
Q ss_pred CceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHH
Q psy6866 651 GFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDIL 730 (961)
Q Consensus 651 ~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~ 730 (961)
+..+.|.+.+.|+++|++.++|+.|++.|++++|+|||+..++..+++++|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 447889999999999999999999999999999999999999999999999853
Q ss_pred HhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 731 ETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 731 ~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
+|+...|++|..+++.++..++.|+|+|||.||++|++.||+|++|| ++++.+++.||+++.++++..+..++
T Consensus 178 ------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 178 ------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 67788899999999999988889999999999999999999999999 78899999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy6866 811 EEGRLIFDNLKKS 823 (961)
Q Consensus 811 ~~gR~~~~ni~~~ 823 (961)
.++|+++++|++|
T Consensus 251 ~~~r~~~~~i~~n 263 (263)
T 2yj3_A 251 KNRKRLSNAIPSN 263 (263)
Confidence 9999999999975
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.92 E-value=8.6e-26 Score=207.98 Aligned_cols=110 Identities=26% Similarity=0.348 Sum_probs=102.8
Q ss_pred HHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccceeccCCCCCCcc
Q psy6866 229 ITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFA 308 (961)
Q Consensus 229 ~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~ 308 (961)
++++|.++.|..++|+|||++++|++++|+|||+|.|++||+|||||+|++|. +.+|||+|||||.|+.|.+++
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~----- 75 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD----- 75 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-----
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCC-----
Confidence 35678888999999999999999999999999999999999999999999987 699999999999999999885
Q ss_pred ccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccc
Q psy6866 309 VESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRL 349 (961)
Q Consensus 309 ~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~ 349 (961)
.+|+||.+.+|.+.++|++||.+|.+|+|.++++.+
T Consensus 76 -----~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 76 -----EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp -----EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred -----EEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 499999999999999999999999999999887653
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-24 Score=232.62 Aligned_cols=279 Identities=27% Similarity=0.366 Sum_probs=198.7
Q ss_pred HHHHhhcccccccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHH
Q psy6866 419 TAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACL 498 (961)
Q Consensus 419 ~~~~l~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 498 (961)
+.++++|+|+++|+++++|++++++++|||||||||.+.+.+.+++..+. ....++..++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-------------------~~~~~l~~~~~ 69 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-------------------DERELLRLAAI 69 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-------------------CHHHHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-------------------CHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999988765321 01223443332
Q ss_pred ccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCC
Q psy6866 499 CSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGA 578 (961)
Q Consensus 499 c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa 578 (961)
.. ..+.+|...|+..++...+..... ......++-. . +.. ..+.+|.
T Consensus 70 ~e----------------~~s~hp~~~a~~~~~~~~g~~~~~----~~~~~~~~G~---~----~~~------~~~~~g~ 116 (287)
T 3a1c_A 70 AE----------------RRSEHPIAEAIVKKALEHGIELGE----PEKVEVIAGE---G----VVA------DGILVGN 116 (287)
T ss_dssp HT----------------TTCCSHHHHHHHHHHHHTTCCCCC----CSCEEEETTT---E----EEE------TTEEEEC
T ss_pred Hh----------------hcCCCHHHHHHHHHHHhcCCCccc----cccceeecCC---C----eEE------EEEEECC
Confidence 21 123456677887776543321100 0111111100 0 000 1133466
Q ss_pred hHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeee
Q psy6866 579 PEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLI 658 (961)
Q Consensus 579 ~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i 658 (961)
++.+.+.+. +++ ..+.+..+.+..+|.+++++++ +.++++.+
T Consensus 117 ~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~i~~~~------------------------d~~~~~~~ 158 (287)
T 3a1c_A 117 KRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR------------------------NGRVEGII 158 (287)
T ss_dssp HHHHHHTTC----------CCC----HHHHHHHHHHHHTTCEEEEEEE------------------------TTEEEEEE
T ss_pred HHHHHhcCC----------Ccc----HHHHHHHHHHHhCCCeEEEEEE------------------------CCEEEEEE
Confidence 554322111 111 1234456677889999998873 23788999
Q ss_pred eecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 659 SLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 659 ~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
...++++|++.++++.|+++|+++.++||++...+..+.+.+|+.. .|
T Consensus 159 ~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------~f 206 (287)
T 3a1c_A 159 AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------------VI 206 (287)
T ss_dssp EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EE
T ss_pred EeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce--------------------------------ee
Confidence 9999999999999999999999999999999999999999999843 67
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHH
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFD 818 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ 818 (961)
....|..|...++.++.. +.++|+||+.||++|++.|++++++| ++.+..++.||+++.++++..+..++..+|.+++
T Consensus 207 ~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~ 284 (287)
T 3a1c_A 207 AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMS 284 (287)
T ss_dssp CSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC----
T ss_pred eecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHH
Confidence 778899999999999887 88999999999999999999999999 6777778889999988899999999999999999
Q ss_pred HHH
Q psy6866 819 NLK 821 (961)
Q Consensus 819 ni~ 821 (961)
||+
T Consensus 285 ~i~ 287 (287)
T 3a1c_A 285 KIK 287 (287)
T ss_dssp ---
T ss_pred hhC
Confidence 885
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-25 Score=207.84 Aligned_cols=116 Identities=27% Similarity=0.316 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHhccCCCeeEEEECCe------EEEEECCCcccceEEEecCCCeeeccEEEEeeCCceeeccCccccccc
Q psy6866 223 ERKSSHITESFAKMIPTRATVIRNGS------VKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGEVEP 296 (961)
Q Consensus 223 ~~~~~~~~~~l~~l~~~~~~V~R~G~------~~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~g~~l~vdeS~LTGEs~p 296 (961)
++|+++.+++|.++.|..++|+|+|+ ++.|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 45677788999999999999999764 6899999999999999999999999999999987 8999999999999
Q ss_pred eeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccc
Q psy6866 297 VTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRL 349 (961)
Q Consensus 297 v~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~ 349 (961)
+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|+|.++++.+
T Consensus 81 v~k~~g~----------~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGS----------TVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTE----------EECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCC----------EEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999875 499999999999999999999999999999887654
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=218.47 Aligned_cols=276 Identities=26% Similarity=0.347 Sum_probs=186.9
Q ss_pred ccccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCC
Q psy6866 430 VRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQD 509 (961)
Q Consensus 430 vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~ 509 (961)
+|+++++|.|++++.||||++||||.|+|+|.++...+. ....++..++.+...
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-------------------~~~~~~~~~~~~~~~------- 54 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-------------------SEDELLQIAASLEAR------- 54 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-------------------CHHHHHHHHHHHHTT-------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-------------------CHHHHHHHHHHhhcc-------
Confidence 588999999999999999999999999999998865331 112344444433211
Q ss_pred CcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcc
Q psy6866 510 NIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTM 589 (961)
Q Consensus 510 ~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~ 589 (961)
...+...++.+++...+.... .......++. ..... .. .+. .+..|.++.+...+...
T Consensus 55 ---------s~~~~~~a~~~~~~~~g~~~~----~~~~~~~~~g---~~~~~-~~---~~~--~~~~~~~~~~~~~~~~~ 112 (280)
T 3skx_A 55 ---------SEHPIAAAIVEEAEKRGFGLT----EVEEFRAIPG---KGVEG-IV---NGR--RYMVVSPGYIRELGIKT 112 (280)
T ss_dssp ---------CCSHHHHHHHHHHHHTTCCCC----CCEEEEEETT---TEEEE-EE---TTE--EEEEECHHHHHHTTCCC
T ss_pred ---------CCCHHHHHHHHHHHhcCCCCC----CccceeecCC---CEEEE-EE---CCE--EEEEecHHHHHHcCCCc
Confidence 112233344444443221110 0011111111 11100 00 111 12346666654432210
Q ss_pred cccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCChH
Q psy6866 590 MAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPAVP 669 (961)
Q Consensus 590 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~ 669 (961)
. .....+...+.+++.++ .+..++|.+.+.++++|++.
T Consensus 113 ----------~--------~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~ 150 (280)
T 3skx_A 113 ----------D--------ESVEKLKQQGKTVVFIL------------------------KNGEVSGVIALADRIRPESR 150 (280)
T ss_dssp ----------C--------TTHHHHHTTTCEEEEEE------------------------ETTEEEEEEEEEEEECTTHH
T ss_pred ----------h--------HHHHHHHhCCCeEEEEE------------------------ECCEEEEEEEecCCCCHhHH
Confidence 0 12334566777766655 23478999999999999999
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~i 749 (961)
++++.|++.|+++.++||+....+..+.+++|+.. .|....|.+|...
T Consensus 151 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~f~~~~~~~k~~~ 198 (280)
T 3skx_A 151 EAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------------------------YFAEVLPHEKAEK 198 (280)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCGGGHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh--------------------------------HhHhcCHHHHHHH
Confidence 99999999999999999999999999999999854 7888999999999
Q ss_pred HHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6866 750 VELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKKSIAYILA 829 (961)
Q Consensus 750 v~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ni~~~i~~~l~ 829 (961)
++.+.+..+ ++|+||+.||++|++.|++|++|| ++++.+++.||+++..++++++..+++.+|+++.++++++.|.+.
T Consensus 199 ~k~~~~~~~-~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 199 VKEVQQKYV-TAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHTTSC-EEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred HHHHHhcCC-EEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999988765 478899999999999999999999 888889999999999999999999999999999999999998864
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-20 Score=206.70 Aligned_cols=147 Identities=11% Similarity=0.065 Sum_probs=112.9
Q ss_pred ecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 660 LYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 660 ~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
..+++||+++++++.|+++|++++|+|||...++.++++++|+..++. .++.... ..+++.+...........++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l--~~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFM--DFDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECE--EECTTSBEEEECSSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeE--EEcccceeEeccccccchhh
Confidence 347999999999999999999999999999999999999999865421 1111100 00000000000000012567
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhh---hCCeeEeecC------CccHhhhhccceEeecCCchHHHHHH
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALK---KADIGIAMGI------TGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~---~AdvGIamg~------~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
+..|.+|...+..+++.++.|+|+|||+||+||++ .||+|||||. ++++.+++++|+||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 88899999999999999999999999999999954 9999999995 57778899999999999999999877
Q ss_pred H
Q psy6866 811 E 811 (961)
Q Consensus 811 ~ 811 (961)
.
T Consensus 293 l 293 (297)
T 4fe3_A 293 L 293 (297)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.1e-19 Score=176.67 Aligned_cols=150 Identities=18% Similarity=0.222 Sum_probs=122.8
Q ss_pred HHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCC
Q psy6866 490 KTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN 569 (961)
Q Consensus 490 ~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~ 569 (961)
+.++..+++|+... ...+||+|.|+++++...+ ....+..|+++.++||+|.||+|++++..+++
T Consensus 16 ~~vl~~a~L~s~~~-------------~~~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g 80 (170)
T 3gwi_A 16 ERVLHSAWLNSHYQ-------------TGLKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTE 80 (170)
T ss_dssp HHHHHHHHHHHHHC-------------CSCCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSS
T ss_pred HHHHHHHHHcCCCC-------------CCCCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCC
Confidence 35788888886421 1246899999999886422 33456789999999999999999999987778
Q ss_pred eEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCC
Q psy6866 570 KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPS 649 (961)
Q Consensus 570 ~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e 649 (961)
++++++|||||.|+++|+.+.. +|...+++++.+..+.+.++.|+.+|+||||+|+|.++.... .+. ...|
T Consensus 81 ~~~l~~KGApE~IL~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~----~~~----~~~E 151 (170)
T 3gwi_A 81 HHQLVCKGALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG----DYQ----RADE 151 (170)
T ss_dssp EEEEEEEECHHHHHTTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS----CCC----GGGS
T ss_pred CEEEEEcCCcHHHHHHhHHHhc-CCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc----ccC----cccc
Confidence 8999999999999999998765 888899999999999999999999999999999999875421 011 1248
Q ss_pred CCceEEeeeeecCC
Q psy6866 650 SGFRLIGLISLYDP 663 (961)
Q Consensus 650 ~~l~~lG~i~~~D~ 663 (961)
+||+|+|++||-|.
T Consensus 152 ~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 152 SDLILEGYIAFLDH 165 (170)
T ss_dssp CSEEEEEEEEEEC-
T ss_pred CCcEEEehhccccc
Confidence 99999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.1e-13 Score=136.69 Aligned_cols=126 Identities=16% Similarity=0.188 Sum_probs=106.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIV 750 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv 750 (961)
+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~--------------------------------~f~~~--~~K~~~~ 99 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH--------------------------------LFQGR--EDKLVVL 99 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE--------------------------------EECSC--SCHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH--------------------------------HhcCc--CChHHHH
Confidence 8999999999999999999999999999999953 44433 5566777
Q ss_pred HHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCC----chHHHHHHHHHHHHHHHHHH
Q psy6866 751 ELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDN----FASIVLGIEEGRLIFDNLKK 822 (961)
Q Consensus 751 ~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~----~~~i~~~i~~gR~~~~ni~~ 822 (961)
+.+.+. .+.++|+||+.||++|++.|++|++|+ ++.+.+++.||+++.+++ +..+.+.+..+|..++++++
T Consensus 100 ~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~ 178 (189)
T 3mn1_A 100 DKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHS 178 (189)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHH
Confidence 666543 467889999999999999999999999 789999999999998874 55678888899999999999
Q ss_pred HHHHHHhhh
Q psy6866 823 SIAYILASN 831 (961)
Q Consensus 823 ~i~~~l~~n 831 (961)
++.|.+.+|
T Consensus 179 ~~~~~~~~~ 187 (189)
T 3mn1_A 179 VYLEGHHHH 187 (189)
T ss_dssp TTSTTC---
T ss_pred HHhcccccc
Confidence 999999887
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.24 E-value=7.8e-12 Score=139.32 Aligned_cols=152 Identities=18% Similarity=0.217 Sum_probs=109.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCcee----EechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNV----FTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v----~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
+++|++.++++.|+++|+++.++||+....+..+.+++|+.........+ ++|.-.. ....
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~---------------~~~~ 242 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLG---------------EVVS 242 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEES---------------CCCC
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecc---------------cccC
Confidence 78999999999999999999999999999999999999984310000000 0010000 0011
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHHHHHHH
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFD 818 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR~~~~ 818 (961)
.+..|+....+.+.++-..+.++|+|||.||++|++.|++|++| ++.+..++.||.++..+++.+++.++.......+
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~ 320 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQ 320 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhh
Confidence 22334444444444444456788999999999999999999999 6889999999999999999999999998888888
Q ss_pred HHHHHHHHHHhhh
Q psy6866 819 NLKKSIAYILASN 831 (961)
Q Consensus 819 ni~~~i~~~l~~n 831 (961)
++++++.|.+.+|
T Consensus 321 r~~~~~~~~~~~~ 333 (335)
T 3n28_A 321 KLSWKSKEGHHHH 333 (335)
T ss_dssp CCCCC--------
T ss_pred hhccccccccccc
Confidence 9999999988876
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1e-10 Score=117.93 Aligned_cols=132 Identities=16% Similarity=0.094 Sum_probs=104.7
Q ss_pred CCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHH
Q psy6866 665 RPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPL 744 (961)
Q Consensus 665 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~ 744 (961)
.+++.++|+.|+++|++++++||++...+..+++++|+.. +|... .
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------~~~~~--k 82 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGK--L 82 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESC--S
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--------------------------------eecCC--C
Confidence 3456789999999999999999999999999999999853 33332 2
Q ss_pred HHHHHHHHHhh-cC---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHH----HHHHHHHHH
Q psy6866 745 QKLRIVELYQS-LD---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIV----LGIEEGRLI 816 (961)
Q Consensus 745 ~K~~iv~~l~~-~g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~----~~i~~gR~~ 816 (961)
.|...++.+.+ .| +.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+++ +.+...|..
T Consensus 83 ~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~ 161 (180)
T 1k1e_A 83 EKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGK 161 (180)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCc
Confidence 35565555433 23 57889999999999999999999998 88899999999999988766665 334456777
Q ss_pred HHHHHHHHHHHHhhh
Q psy6866 817 FDNLKKSIAYILASN 831 (961)
Q Consensus 817 ~~ni~~~i~~~l~~n 831 (961)
+++++.++.|..+.+
T Consensus 162 ~~~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 162 SSVFDTAQGFLKSVK 176 (180)
T ss_dssp THHHHCHHHHHHHGG
T ss_pred hhhhhhccchhhhhc
Confidence 888888888877654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=8.5e-11 Score=119.67 Aligned_cols=124 Identities=14% Similarity=0.090 Sum_probs=99.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec--CHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART--SPLQKLR 748 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~--~p~~K~~ 748 (961)
+|+.|+++|+++.++||+....+..+++++|+.. +|... .|+-...
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~--------------------------------~~~~~kpk~~~~~~ 101 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH--------------------------------YYKGQVDKRSAYQH 101 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE--------------------------------EECSCSSCHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc--------------------------------ceeCCCChHHHHHH
Confidence 3999999999999999999999999999999953 34433 4555556
Q ss_pred HHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH----HHHHHHHHHHHHHHHHHHH
Q psy6866 749 IVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS----IVLGIEEGRLIFDNLKKSI 824 (961)
Q Consensus 749 iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~----i~~~i~~gR~~~~ni~~~i 824 (961)
+++.+.-..+.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+ +.+.+...|..++++.+.+
T Consensus 102 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~ 180 (191)
T 3n1u_A 102 LKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGY 180 (191)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHH
Confidence 66666555567889999999999999999999999 888999999999999887555 4555566777777766655
Q ss_pred HHH
Q psy6866 825 AYI 827 (961)
Q Consensus 825 ~~~ 827 (961)
.++
T Consensus 181 ~~~ 183 (191)
T 3n1u_A 181 LKQ 183 (191)
T ss_dssp HTC
T ss_pred Hhc
Confidence 543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.09 E-value=3e-10 Score=118.95 Aligned_cols=149 Identities=15% Similarity=0.079 Sum_probs=106.1
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CCceeE--echhh-cc----------------
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS--SDDNVF--TGTDL-RK---------------- 720 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~~v~--~g~~~-~~---------------- 720 (961)
..+.+++.++|++|++.|++++++||+....+..+++++|+..+.. ....+. +|..+ ..
T Consensus 21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~ 100 (227)
T 1l6r_A 21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 100 (227)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence 4577889999999999999999999999999999999999853100 001122 12211 00
Q ss_pred ---------------------CCHHHHHHHHHhcCceE-----EeecCH--HHHHHHHHHHhhc----CCEEEEEcCCCC
Q psy6866 721 ---------------------ITDEELKDILETNKELV-----FARTSP--LQKLRIVELYQSL----DEIVAVTGDGVN 768 (961)
Q Consensus 721 ---------------------~~~~~~~~~~~~~~~~v-----~ar~~p--~~K~~iv~~l~~~----g~~V~~vGDG~N 768 (961)
.+.+++.++.....-.+ +....| .+|...++.+.+. .+.++++||+.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~n 180 (227)
T 1l6r_A 101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 180 (227)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred cCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHH
Confidence 01222333322211001 112224 6899888888653 245788899999
Q ss_pred CHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 769 DAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 769 D~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|.+|++.|++|++|| ++.+.+++.||+++.+++-+++.++++
T Consensus 181 D~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 181 DMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 999999999999999 889999999999999989999998876
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.1e-10 Score=119.05 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=84.8
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~i 749 (961)
.+|+.|+++|+++.++||++...+..+++++|+.. +|.... .|...
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------~~~~~k--~k~~~ 104 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------IYQGQD--DKVQA 104 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE--------------------------------EECSCS--SHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE--------------------------------EeeCCC--CcHHH
Confidence 35999999999999999999999999999999853 454443 45555
Q ss_pred HHHHhh----cCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHH
Q psy6866 750 VELYQS----LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASI 806 (961)
Q Consensus 750 v~~l~~----~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i 806 (961)
++.+.+ ..+.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++-.++
T Consensus 105 ~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~ 164 (195)
T 3n07_A 105 YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGA 164 (195)
T ss_dssp HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTH
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCH
Confidence 555543 2356888999999999999999999999 8999999999999988776654
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.6e-10 Score=114.65 Aligned_cols=114 Identities=18% Similarity=0.154 Sum_probs=91.1
Q ss_pred CCceEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH--HcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 650 SGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAI--KCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 650 ~~l~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~--~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
.+...++.+.++|.. +|+.|++.|+++.++||+ ..+..+++ ++|+.
T Consensus 29 ~~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 344677888888873 899999999999999999 67778888 55552
Q ss_pred HHHHhcCceEEeecCHHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCc
Q psy6866 728 DILETNKELVFARTSPLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNF 803 (961)
Q Consensus 728 ~~~~~~~~~v~ar~~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~ 803 (961)
+|. .+.+|...++.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-
T Consensus 77 ---------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~ 144 (168)
T 3ewi_A 77 ---------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGG 144 (168)
T ss_dssp ---------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTT
T ss_pred ---------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCC
Confidence 222 124677777776553 356888999999999999999999999 8999999999999998776
Q ss_pred hHHH
Q psy6866 804 ASIV 807 (961)
Q Consensus 804 ~~i~ 807 (961)
.+++
T Consensus 145 ~G~~ 148 (168)
T 3ewi_A 145 RGAI 148 (168)
T ss_dssp TTHH
T ss_pred ccHH
Confidence 6644
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.02 E-value=4.9e-10 Score=115.68 Aligned_cols=100 Identities=18% Similarity=0.172 Sum_probs=85.9
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIV 750 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv 750 (961)
+++.|+++|+++.++||+....+..+++++|+.. +|... ..|...+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~--------------------------------~f~~~--k~K~~~l 129 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH--------------------------------LYQGQ--SDKLVAY 129 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSC--SSHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch--------------------------------hhccc--CChHHHH
Confidence 8999999999999999999999999999999953 45544 4577777
Q ss_pred HHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH
Q psy6866 751 ELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS 805 (961)
Q Consensus 751 ~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~ 805 (961)
+.+.++ .+.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++-.+
T Consensus 130 ~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 130 HELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 766553 567889999999999999999999999 788999999999998875444
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=109.77 Aligned_cols=105 Identities=20% Similarity=0.221 Sum_probs=87.2
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIV 750 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv 750 (961)
+++.|+++|+++.++||+....+..+++++|+. +|+.. ..|...+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~---------------------------------~~~~~--~~k~~~l 91 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP---------------------------------VLHGI--DRKDLAL 91 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC---------------------------------EEESC--SCHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe---------------------------------eEeCC--CChHHHH
Confidence 899999999999999999999999999999983 23333 4466666
Q ss_pred HHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 751 ELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 751 ~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
+.+.++ .+.++|+||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..+++..+.
T Consensus 92 ~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 92 KQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 665543 356888999999999999999999999 788999999999999888777655443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-09 Score=106.22 Aligned_cols=105 Identities=24% Similarity=0.192 Sum_probs=85.0
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHHH
Q psy6866 671 AIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIV 750 (961)
Q Consensus 671 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv 750 (961)
+++.|++.|+++.++||++...+..+.+++|+.. .|....| |...+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~~~~~kp--k~~~~ 84 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY--------------------------------LFQGVVD--KLSAA 84 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE--------------------------------EECSCSC--HHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE--------------------------------eecccCC--hHHHH
Confidence 8999999999999999999999999999999853 3443333 44444
Q ss_pred HHHhh----cCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH-HHHHH
Q psy6866 751 ELYQS----LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS-IVLGI 810 (961)
Q Consensus 751 ~~l~~----~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~-i~~~i 810 (961)
+.+.+ ..+.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+++..+ +.+++
T Consensus 85 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 85 EELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp HHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 44332 2357889999999999999999999998 899999999999999988665 44443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=5.9e-09 Score=113.16 Aligned_cols=67 Identities=22% Similarity=0.296 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.++ .+.|+++||+.||.+|++.|++|+||| ++.+.+|+.||+++.+++-+++.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4577777777543 235778899999999999999999999 999999999999999999999998887
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.4e-09 Score=112.77 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccce--EeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM--ILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~--vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.+. | +.++++||+.||.+|++.|++|+||| ++.+.+|++||. ++.+++-++++++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4688888777553 2 45778899999999999999999999 999999999984 677888899998876
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.83 E-value=4.6e-09 Score=116.62 Aligned_cols=167 Identities=17% Similarity=0.194 Sum_probs=110.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechh------------------hccCCHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTD------------------LRKITDE 724 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~------------------~~~~~~~ 724 (961)
++++++.++++.|++ |+.+.++||+....+..+.+.+++..... ...+...+ +....++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 179 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH--GTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 179 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE--EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc--ccccchhhhccccccceeEEecCHHHHhhhhHH
Confidence 568999999999999 99999999999766677777777632100 00000000 0000001
Q ss_pred HHHHHHHh----c-CceEE---eecCHHHHHHHHHHHhhcC--CEEEEEcCCCCCHhhhhhC----CeeEeecCCccHhh
Q psy6866 725 ELKDILET----N-KELVF---ARTSPLQKLRIVELYQSLD--EIVAVTGDGVNDAPALKKA----DIGIAMGITGSEVS 790 (961)
Q Consensus 725 ~~~~~~~~----~-~~~v~---ar~~p~~K~~iv~~l~~~g--~~V~~vGDG~ND~~al~~A----dvGIamg~~g~~~a 790 (961)
++ +.+.. . +..+. --..+.+|...++.+.... ++|+++|||.||++|++.| ++|||| ++.+.+
T Consensus 180 ~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~l 256 (332)
T 1y8a_A 180 LF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYA 256 (332)
T ss_dssp HH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHH
T ss_pred HH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHH
Confidence 11 10000 0 00011 1123677998888775543 4578889999999999999 999999 688999
Q ss_pred hhccceEeecCCchHHHHHH----HHHHHHHHHHHH-------HHHHHHhhhHhhHH
Q psy6866 791 KQTADMILMDDNFASIVLGI----EEGRLIFDNLKK-------SIAYILASNIPEIL 836 (961)
Q Consensus 791 ~~aad~vl~~~~~~~i~~~i----~~gR~~~~ni~~-------~i~~~l~~ni~~i~ 836 (961)
++.||+++.+++.+++..++ ..||..+ |+.+ ++.+..+.|+-.++
T Consensus 257 k~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T 1y8a_A 257 LKHADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVL 312 (332)
T ss_dssp HTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHH
T ss_pred HhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHH
Confidence 99999999999998877665 4678777 7666 56566666655543
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.3e-08 Score=109.86 Aligned_cols=67 Identities=31% Similarity=0.423 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
.|...++.+.+. .+.++++||+.||.+|++.|++|+||| ++.+.+|++||+|+.+++-+++.++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 677777776543 345778899999999999999999999 8999999999999999999999988873
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.82 E-value=4.8e-09 Score=113.23 Aligned_cols=66 Identities=23% Similarity=0.288 Sum_probs=46.8
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.+. .+.++++||+.||.+|++.|++|+||| ++.+.+|++||+|+.+++-+++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 477777776553 245778899999999999999999999 899999999999999999999998875
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1.1e-08 Score=109.09 Aligned_cols=66 Identities=27% Similarity=0.355 Sum_probs=55.5
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.+. .+.++++||+.||.+|++.|++|+||| ++.+.+|+.||+|+.+++-+++.++++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 455556665442 345777899999999999999999999 899999999999999889999998886
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.79 E-value=6.7e-09 Score=111.59 Aligned_cols=68 Identities=24% Similarity=0.231 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
..|...++.+.++ .+.++++||+.||.+|++.|++|+||| ++.+.+|++||+++.+++-+++.+++++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3577777666542 345777899999999999999999999 8999999999999999999999988863
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.77 E-value=5.7e-09 Score=111.89 Aligned_cols=68 Identities=29% Similarity=0.419 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
..|...++.+.++ .+.++++||+.||.+|++.|++|+||| ++.+.+|++||+|+.+++-+++.+++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 4677777776543 235778899999999999999999999 9999999999999999999999988863
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.75 E-value=9.8e-09 Score=111.20 Aligned_cols=67 Identities=18% Similarity=0.174 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.+. | +.|+++||+.||.+|++.|++|+||| ++.+.+|++||+|+.+++-+++.++++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3588777777553 2 35778899999999999999999999 999999999999999999999998876
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.9e-08 Score=115.34 Aligned_cols=136 Identities=16% Similarity=0.218 Sum_probs=105.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee--
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-- 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-- 740 (961)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+.........+.+| .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------~~tg~~~ 315 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------TLTGRVV 315 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT--------------------EEEEEEC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC--------------------EEEeeEc
Confidence 78999999999999999999999999999999999999994310000000111 01111
Q ss_pred ---cCHHHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHH
Q psy6866 741 ---TSPLQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 741 ---~~p~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~g 813 (961)
..+..|..+++.+.++ | +.+.|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++.+++.++.++
T Consensus 316 ~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~ 393 (415)
T 3p96_A 316 GPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVT 393 (415)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCC
T ss_pred cCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCC
Confidence 2256677777666543 2 4688899999999999999999999 57888899999999999999999998888
Q ss_pred HHHHHHH
Q psy6866 814 RLIFDNL 820 (961)
Q Consensus 814 R~~~~ni 820 (961)
|.-+.+.
T Consensus 394 ~~~~~~~ 400 (415)
T 3p96_A 394 RGEIEAA 400 (415)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7765554
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.1e-08 Score=105.37 Aligned_cols=133 Identities=23% Similarity=0.228 Sum_probs=94.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee-c
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-T 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-~ 741 (961)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++...+- .....+... .
T Consensus 75 ~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f---~~~~~~~~~-------------~~~~~~~~~~~ 138 (217)
T 3m1y_A 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF---SNTLIVEND-------------ALNGLVTGHMM 138 (217)
T ss_dssp CBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE---EEEEEEETT-------------EEEEEEEESCC
T ss_pred cCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc---cceeEEeCC-------------EEEeeeccCCC
Confidence 68899999999999999999999999999999999999985310 001100000 000000000 1
Q ss_pred CHHHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHH
Q psy6866 742 SPLQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~g 813 (961)
....|..+++.+.+. .+.++++||+.||++|++.|+++++| ++.+..++.||+++.++++..+..++.|-
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 234566666555432 35678889999999999999999999 57888899999999999999998877754
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.2e-08 Score=109.60 Aligned_cols=67 Identities=22% Similarity=0.233 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.++ | +.++++||+.||.+|++.|++|+||| ++.+.+|++||+|+.+++-+++.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688777777543 2 45778899999999999999999999 999999999999999989999998887
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=4.4e-08 Score=99.20 Aligned_cols=107 Identities=21% Similarity=0.200 Sum_probs=85.1
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~i 749 (961)
.+++.|+++|+++.++||++...+..+.+++|+.. +|....| |...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------~~~~~kp--k~~~ 105 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------LYQGQSN--KLIA 105 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSCSC--SHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce--------------------------------eecCCCC--CHHH
Confidence 38999999999999999999999999999999853 3433333 3444
Q ss_pred HHHHhh-cC---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHH-HHHH
Q psy6866 750 VELYQS-LD---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIV-LGIE 811 (961)
Q Consensus 750 v~~l~~-~g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~-~~i~ 811 (961)
++.+.+ .| +.++|+||+.||.+|++.|+++++++ ++.+.+++.||+++.+.+..+++ ++++
T Consensus 106 ~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 106 FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 444433 23 56889999999999999999999998 77788888999999988767666 5544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.66 E-value=8e-08 Score=100.64 Aligned_cols=148 Identities=20% Similarity=0.207 Sum_probs=101.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeEe-chh-------------------h--
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVFT-GTD-------------------L-- 718 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~~-g~~-------------------~-- 718 (961)
.+.+.+.+++++++++|++++++||+....+..+.+.+|+..+... ...+.. |.. .
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 4667889999999999999999999999999999999987431000 011111 110 0
Q ss_pred -c-----------------cCCHHHHHHHHHhcCc--eEE-----eecC--HHHHHHHHHHHhhc----CCEEEEEcCCC
Q psy6866 719 -R-----------------KITDEELKDILETNKE--LVF-----ARTS--PLQKLRIVELYQSL----DEIVAVTGDGV 767 (961)
Q Consensus 719 -~-----------------~~~~~~~~~~~~~~~~--~v~-----ar~~--p~~K~~iv~~l~~~----g~~V~~vGDG~ 767 (961)
. ....+.+..+...... .+. .... ...|...++.+.++ .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0 0022333333332210 111 1111 24677777776542 24577889999
Q ss_pred CCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 768 NDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 768 ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
||.+|++.|++|++|+ ++.+..++.||+++.+.+-+++.++++
T Consensus 180 nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999 788888999999998888888888776
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=4.6e-08 Score=99.90 Aligned_cols=128 Identities=21% Similarity=0.239 Sum_probs=88.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee-c
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-T 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-~ 741 (961)
++.+++.++++.|++.|+++.++||+....+..+.+.+|+.... ...+..... .....+... +
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~~~~ 139 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF--ANRLIVKDG--------------KLTGDVEGEVL 139 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEE--EEEEEEETT--------------EEEEEEECSSC
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEE--EeeeEEECC--------------EEcCCcccCcc
Confidence 56789999999999999999999999988888888888873210 000000000 000001001 2
Q ss_pred CHHHHHHHHHHHhh-cC---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHH
Q psy6866 742 SPLQKLRIVELYQS-LD---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 742 ~p~~K~~iv~~l~~-~g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~ 808 (961)
.+..|...+..+.+ .| +.++++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 140 ~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 24567666655543 22 45788899999999999999999997 55667888999998777776643
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.1e-07 Score=93.47 Aligned_cols=111 Identities=18% Similarity=0.178 Sum_probs=87.1
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
..+++.++++.|++.|+++.++||.....+..+.+++|+.. .|....|
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------~~~~~kp 84 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------IYTGSYK 84 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------------------------------EEECC--
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------------------------------hccCCCC
Confidence 34667899999999999999999999999999999999843 3333223
Q ss_pred --HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHH
Q psy6866 744 --LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIV 807 (961)
Q Consensus 744 --~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~ 807 (961)
+--..+++.+.-..+.++|+||+.||.+|.+.|+++++++ ++.+..++.||+++.+.+-.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 85 KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 2222334444333456889999999999999999999998 78888888999999988877776
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.59 E-value=3.4e-08 Score=108.56 Aligned_cols=131 Identities=17% Similarity=0.225 Sum_probs=94.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe-ec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA-RT 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a-r~ 741 (961)
++.|++.++++.|++.|+++.++||.....+..+.+.+|+...-.. .....+..+.. .+.. -.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~-~l~~~dg~~tg---------------~i~~~~~ 242 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN-TVEIRDNVLTD---------------NITLPIM 242 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE-CEEEETTEEEE---------------EECSSCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE-EEEeeCCeeee---------------eEecccC
Confidence 4889999999999999999999999999999999999998431000 00000000000 0000 11
Q ss_pred CHHHHHHHHHHHhh----cCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 742 SPLQKLRIVELYQS----LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 742 ~p~~K~~iv~~l~~----~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.+..|..+++.+.+ ..+.++|+||+.||++|++.|++|++++ +.+..++.||.++..+++..++.+++
T Consensus 243 ~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 243 NAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 33556666655433 2356888999999999999999999994 77778889999999889998876553
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.51 E-value=3.7e-07 Score=98.66 Aligned_cols=66 Identities=21% Similarity=0.284 Sum_probs=56.6
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++.+++.++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 677777777543 245778899999999999999999999 888888999999999888899988876
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.44 E-value=1.2e-07 Score=96.01 Aligned_cols=119 Identities=19% Similarity=0.322 Sum_probs=87.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+... .......... ..-....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~------------------~~~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM--ANRAIFEDGK------------------FQGIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE--EEEEEEETTE------------------EEEEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh--eeeEEeeCCc------------------eECCcCC
Confidence 7889999999999999999999999988888888 88887421 0001101000 0113455
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|..|...++.+ ..+.++++||+.||.+|++.|++|++|+ ++.+ .||+++. ++..+...++
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 67799998888 4456678899999999999999999999 6655 7899886 4666665543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.39 E-value=1.4e-06 Score=88.91 Aligned_cols=129 Identities=14% Similarity=0.117 Sum_probs=93.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...-. ..+..+.+.. ....-...
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~---------------~~~~~~p~ 130 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLC--HKLEIDDSDR---------------VVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEE--EEEEECTTSC---------------EEEEECCS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceec--ceeEEcCCce---------------EEeeecCC
Confidence 5789999999999999 9999999999999999999999853100 0111111100 00011267
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+.|...++.+....+.++|+||+.||++|.+.|+++++++ . .+..++.++.++.-+++..+..++.
T Consensus 131 p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-A-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-C-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-C-cHHHHHHHhhhccccchHHHHHHHH
Confidence 88999999999877888999999999999999999999985 3 4444444443332346777776553
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.38 E-value=6.7e-07 Score=93.25 Aligned_cols=129 Identities=24% Similarity=0.321 Sum_probs=93.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+. -...-.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~kp~ 162 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL---TVIAGDDSV------------------ERGKPH 162 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC---SEEECTTTS------------------SSCTTS
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe---eeEEeCCCC------------------CCCCCC
Confidence 46789999999999999999999999999999999999975321 122222211 012233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCccHhhhh-ccceEeecCCchHHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITGSEVSKQ-TADMILMDDNFASIVLGIEEGR 814 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~~~a~~-aad~vl~~~~~~~i~~~i~~gR 814 (961)
|+--..+.+.+.-..+.++++||+.||+.|++.|++ +|+||.+..+..++ .||+++. ++..+...++.|+
T Consensus 163 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 163 PDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 444455555555445668889999999999999999 99998444355454 7999985 6888888777553
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.35 E-value=2.1e-07 Score=98.09 Aligned_cols=62 Identities=21% Similarity=0.307 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhC--CeeEeecCCccHhhhhccceEeec-CCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKA--DIGIAMGITGSEVSKQTADMILMD-DNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~A--dvGIamg~~g~~~a~~aad~vl~~-~~~~~i~~~i~ 811 (961)
.+|...++.+.+.-. |+++||+.||.+||+.| ++||||| ++ ++.||+++.+ ++-+++.++++
T Consensus 159 ~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 159 VNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp CCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 378888888876533 77889999999999999 9999999 66 6789999987 66778887776
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.6e-07 Score=93.25 Aligned_cols=129 Identities=12% Similarity=0.096 Sum_probs=92.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...... ..++.+.. ....-.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-~~i~~~~~-------------------~~~kp~ 129 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE-ADVLGRDE-------------------APPKPH 129 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG-GGEECTTT-------------------SCCTTS
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc-ceEEeCCC-------------------CCCCCC
Confidence 4568999999999999999999999999999999999998432100 11121110 011222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe-eEeecCCccHhhhhccceEeecCCchHHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI-GIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGR 814 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv-GIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~gR 814 (961)
|+--..+.+.+.-..+.++++||+.||..|.+.|++ +|+|+ ++.+..++.||+++. ++..+...+...|
T Consensus 130 ~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~ 199 (205)
T 3m9l_A 130 PGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEG 199 (205)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhcc
Confidence 333344444444334568888999999999999999 99999 777777888999985 6788887776544
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.3e-06 Score=93.62 Aligned_cols=66 Identities=23% Similarity=0.345 Sum_probs=56.2
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++.+++.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 677777776542 245778899999999999999999999 888888999999999888899988775
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=93.24 Aligned_cols=66 Identities=26% Similarity=0.319 Sum_probs=55.0
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+.+-+++.++++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 455556655442 235788899999999999999999999 888888999999999888899998876
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.31 E-value=5.6e-07 Score=96.58 Aligned_cols=67 Identities=33% Similarity=0.311 Sum_probs=57.0
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.+. | +.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-+++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 4777777776543 2 35778899999999999999999999 888888999999999888889988776
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.27 E-value=3.6e-06 Score=90.49 Aligned_cols=66 Identities=18% Similarity=0.133 Sum_probs=32.0
Q ss_pred HHHHHHHHHhhc-C----CE--EEEEcCCCCCHhhhhhCCeeEeecCCcc---Hhhhhc--cc-eEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL-D----EI--VAVTGDGVNDAPALKKADIGIAMGITGS---EVSKQT--AD-MILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~-g----~~--V~~vGDG~ND~~al~~AdvGIamg~~g~---~~a~~a--ad-~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.+. | +. ++++||+.||.+|++.|++||+|| ++. +..++. || +++.+++-++++++++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 455555554321 2 34 778899999999999999999999 776 455543 78 8888888889988776
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.3e-06 Score=89.37 Aligned_cols=129 Identities=16% Similarity=0.129 Sum_probs=87.3
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-CceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-DDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...... ...++...... ........+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 148 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF--------------KELDNSNGA 148 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE--------------EEEECTTST
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce--------------eccCCCCCC
Confidence 789999999999999999999999999999999999998531100 00111110000 000112344
Q ss_pred HHHHHHHHHHH-hhcCCEEEEEcCCCCCHhhhhh----CCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELY-QSLDEIVAVTGDGVNDAPALKK----ADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l-~~~g~~V~~vGDG~ND~~al~~----AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|..|...+..+ .-..+.++|+||+.||.+|++. +.|+++|+ ++.+..+..||+++. ++..+...
T Consensus 149 ~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~ 217 (219)
T 3kd3_A 149 CDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASL 217 (219)
T ss_dssp TTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHH
T ss_pred cccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHh
Confidence 55666666554 4356788999999999999976 45555555 566777888999985 55555543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=3e-06 Score=90.18 Aligned_cols=64 Identities=20% Similarity=0.314 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhc-C-----CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D-----EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g-----~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.+. | +.++++||+.||.+|++.|++|++|| ++.+ . +|+++..+++-+++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888777553 2 66888899999999999999999999 7777 4 7789988888888887776
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1.5e-06 Score=92.07 Aligned_cols=56 Identities=16% Similarity=0.190 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhc-----CCEEEEEcCCCCCHhhhhhCCeeEeecCCcc-HhhhhccceEeec
Q psy6866 744 LQKLRIVELYQSL-----DEIVAVTGDGVNDAPALKKADIGIAMGITGS-EVSKQTADMILMD 800 (961)
Q Consensus 744 ~~K~~iv~~l~~~-----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~-~~a~~aad~vl~~ 800 (961)
..|...++.+.+. .+.|+++||+.||.+||+.|++|+||| ++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 4688888777543 246888899999999999999999999 777 6678888887754
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.14 E-value=3.8e-06 Score=87.22 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=78.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...- ..++.+.+. -...-.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f---~~i~~~~~~------------------~~~Kp~ 148 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF---HAIVDPTTL------------------AKGKPD 148 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC---SEECCC---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc---CEEeeHhhC------------------CCCCCC
Confidence 3688999999999999999999999754 67778888875421 112222110 011222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+.++|+||+.||+.|.+.|+++++|. ++.+..+ .||+++.+.+-..+..+++
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHH
Confidence 22334455555544466888899999999999999999998 6656555 8999987654444444443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=3.7e-06 Score=86.78 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=87.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. .....
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 144 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF---DAIVGSSLDG------------------KLSTK 144 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC---SEEEEECTTS------------------SSCSH
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe---eeeeccCCCC------------------CCCCC
Confidence 57899999999999999999999999999999999999985321 1122221110 01112
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCccHhh-hhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITGSEVS-KQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~~~a-~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+.++++||+.||+.|++.|++ +++||....+.. +..||+++. ++..+...+.
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~ 215 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKIL 215 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHH
Confidence 333334444444334568888999999999999999 998883333333 578999986 5777776665
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.11 E-value=4.2e-06 Score=85.95 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+........+.+.+|+.... ..++.+.+.. .....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~------------------~~kp~ 152 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF---DALASAEKLP------------------YSKPH 152 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEECTTSS------------------CCTTS
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC---cEEEeccccC------------------CCCCC
Confidence 45688999999999999999999999988888888888874321 1122221100 01122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee----cCCccHhhhhccceEeec
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM----GITGSEVSKQTADMILMD 800 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam----g~~g~~~a~~aad~vl~~ 800 (961)
|.--..+.+.+.-..+.++++||+.||.+|++.|+++++| + ++.+..+..||+++.+
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~ 213 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS 213 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC
Confidence 3444455555544445678889999999999999999999 5 4455567889998863
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.09 E-value=4.7e-06 Score=88.63 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=86.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+.+++.+.++.|++.|+++.++|++....+..+.+.+|+..... ..++.+.+. -.....
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~------------------~~~kp~ 162 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP--DFLVTPDDV------------------PAGRPY 162 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC--SCCBCGGGS------------------SCCTTS
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh--HheecCCcc------------------CCCCCC
Confidence 467899999999999999999999999888888888777643210 112222111 011223
Q ss_pred HHHHHHHHHHHhhcC-CEEEEEcCCCCCHhhhhhCC---eeEeecCCc------------------------cHhhhhc-
Q psy6866 743 PLQKLRIVELYQSLD-EIVAVTGDGVNDAPALKKAD---IGIAMGITG------------------------SEVSKQT- 793 (961)
Q Consensus 743 p~~K~~iv~~l~~~g-~~V~~vGDG~ND~~al~~Ad---vGIamg~~g------------------------~~~a~~a- 793 (961)
|+--..+.+.+.-.. +.++++||+.||..|++.|+ +++++| ++ .+..++.
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENG 241 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcC
Confidence 444455556665444 56888899999999999999 788887 44 2333444
Q ss_pred cceEeecCCchHHHHHHH
Q psy6866 794 ADMILMDDNFASIVLGIE 811 (961)
Q Consensus 794 ad~vl~~~~~~~i~~~i~ 811 (961)
||+++. ++..+...+.
T Consensus 242 ad~v~~--~~~el~~~l~ 257 (267)
T 1swv_A 242 AHFTIE--TMQELESVME 257 (267)
T ss_dssp CSEEES--SGGGHHHHHH
T ss_pred Cceecc--CHHHHHHHHH
Confidence 899985 5777776654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.09 E-value=3.4e-06 Score=86.51 Aligned_cols=122 Identities=8% Similarity=0.019 Sum_probs=82.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+...- ..++.+.+.. .....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~Kp~ 147 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF---DAIADPAEVA------------------ASKPA 147 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC---SEECCTTTSS------------------SCTTS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc---ceEeccccCC------------------CCCCC
Confidence 46789999999999999999999998 3455667777774311 1122221110 11222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+--..+.+.+.-..+.++++||+.||..|++.|+++++|+ ++.+..+ .||+++.+.+-.++..+
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~ 212 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFL 212 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHH
T ss_pred hHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHH
Confidence 33334445555434456788899999999999999999998 6777667 89999876544444443
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=2e-06 Score=93.10 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=86.2
Q ss_pred CCCCChHHHHHHHHHc-CCEEEEEcCC---------------------CHHHHHHHHHHcCCCCCCCCCceeEechhhcc
Q psy6866 663 PPRPAVPDAIDACHKA-GIRVIMVTGD---------------------HPCTAKAIAIKCHILSETSSDDNVFTGTDLRK 720 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~a-gi~v~m~TGD---------------------~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~ 720 (961)
..++++.++++.+++. |+++.+.|.. ....+..+.+..|+... +........
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~------~~~~~~~~~ 195 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN------INRCNPLAG 195 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE------EEECCGGGT
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE------EEEcccccc
Confidence 3567899999999988 9998888866 23333444444444210 000000000
Q ss_pred CCHHHHHHHHHhcCceEEeecCH--HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhcc
Q psy6866 721 ITDEELKDILETNKELVFARTSP--LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTA 794 (961)
Q Consensus 721 ~~~~~~~~~~~~~~~~v~ar~~p--~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aa 794 (961)
. .....+....| ..|...++.+.++ .+.++++||+.||.+|++.|++|++|| ++.+..++.|
T Consensus 196 ~-----------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a 263 (289)
T 3gyg_A 196 D-----------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLH 263 (289)
T ss_dssp C-----------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHC
T ss_pred C-----------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhC
Confidence 0 00002222222 3566666666442 245788899999999999999999999 8888899999
Q ss_pred ceEeecCCchHHHHHHH
Q psy6866 795 DMILMDDNFASIVLGIE 811 (961)
Q Consensus 795 d~vl~~~~~~~i~~~i~ 811 (961)
|+++.+++-+++.++++
T Consensus 264 ~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 264 NLITDSEYSKGITNTLK 280 (289)
T ss_dssp CCBCSSCHHHHHHHHHH
T ss_pred CEEcCCCCcCHHHHHHH
Confidence 99999888888888776
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.07 E-value=8.6e-06 Score=84.59 Aligned_cols=105 Identities=17% Similarity=0.134 Sum_probs=74.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE-eec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF-ART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~-ar~ 741 (961)
.+.|++.+.++.|++.|+++.++||.....+..+++.+|+..-... ........+. ..+. ..+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~---------------g~~~~~~~ 155 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIAT-DPEYRDGRYT---------------GRIEGTPS 155 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEEC-EEEEETTEEE---------------EEEESSCS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEc-ceEEECCEEe---------------eeecCCCC
Confidence 4789999999999999999999999999999999999998421000 0000000000 0011 122
Q ss_pred CHHHHHHHHHHHhh-cC------CEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 742 SPLQKLRIVELYQS-LD------EIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 742 ~p~~K~~iv~~l~~-~g------~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
.+..|...++.+.+ .| +.+.++||+.||.+|++.|++++++.
T Consensus 156 ~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 156 FREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp STHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred cchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 34677777655533 34 57889999999999999999999985
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.99 E-value=7.8e-06 Score=84.54 Aligned_cols=128 Identities=15% Similarity=0.122 Sum_probs=89.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. .....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 149 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK---INIVTRDDVS------------------YGKPD 149 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS---SCEECGGGSS------------------CCTTS
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh---heeeccccCC------------------CCCCC
Confidence 45789999999999999999999999999999999999885421 1222222110 11222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCccHhhhhc-cceEeecCCchHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITGSEVSKQT-ADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~~~a~~a-ad~vl~~~~~~~i~~~i~~g 813 (961)
|+--..+.+.+.-..+.++++||+.||..|++.|++ ++++|.+..+..++. ||+++. ++..+...++..
T Consensus 150 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~~ 222 (233)
T 3s6j_A 150 PDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDEI 222 (233)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGGT
T ss_pred hHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHHH
Confidence 333334444444334568889999999999999999 777774555555554 899885 677777766543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.98 E-value=8.1e-06 Score=83.74 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=79.7
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
+.+++.+.++.|++.|+++.++|+..........+.+|+.... ..++.+.+.. .....|
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------------------~~k~~~ 148 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF---DIIIGGEDVT------------------HHKPDP 148 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC---SEEECGGGCS------------------SCTTST
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe---eeeeehhhcC------------------CCCCCh
Confidence 4688999999999999999999999988888888888875321 1222221110 011122
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee----cCCccHhhhhc-cceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM----GITGSEVSKQT-ADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam----g~~g~~~a~~a-ad~vl~~~~~~~i~~~i 810 (961)
.--..+.+.+.-..+.++++||+.||.+|++.|+++++| + ++.+..++. ||+++. ++..+...+
T Consensus 149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 323344444443344577889999999999999999887 4 334444444 899886 344444433
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.97 E-value=9.8e-06 Score=83.79 Aligned_cols=127 Identities=17% Similarity=0.242 Sum_probs=84.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee--
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR-- 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar-- 740 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..+. .+...-... ....+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~-----~f~~~~~~~------------~~~~~~~~~~ 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN-----VFANRLKFY------------FNGEYAGFDE 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG-----EEEECEEEC------------TTSCEEEECT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc-----EEeeeEEEc------------CCCcEecCCC
Confidence 68899999999999999999999999999999999999985310 111000000 00001111
Q ss_pred ----cCHHHHHHHHHHHhh-cC-CEEEEEcCCCCCHhhhhhCCeeEeecCCc-cHhhhhccceEeecCCchHHHH
Q psy6866 741 ----TSPLQKLRIVELYQS-LD-EIVAVTGDGVNDAPALKKADIGIAMGITG-SEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 741 ----~~p~~K~~iv~~l~~-~g-~~V~~vGDG~ND~~al~~AdvGIamg~~g-~~~a~~aad~vl~~~~~~~i~~ 808 (961)
+.+..|..+++.+.+ .| +.++|+||+.||..|.+.|+++|++|... .+.....+|+++. ++..+..
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 221 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLG 221 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHH
Confidence 112356666665543 23 56889999999999999999998887322 2334456888875 4555543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.93 E-value=4.4e-05 Score=78.81 Aligned_cols=124 Identities=10% Similarity=0.091 Sum_probs=83.9
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDH---PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~---~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+...- ..++.+.+.. ..+
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~k 158 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI---DKTFFADEVL------------------SYK 158 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC---SEEEEHHHHT------------------CCT
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh---hhheeccccC------------------CCC
Confidence 47899999999999999999999999 88888888888875321 1222222110 112
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEee---cCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAM---GITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIam---g~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|+--..+.+.+.-..+.++++||+. ||..|++.|+++++| | ++.+..+..+|+++. ++..+...+.
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHh--hHHHHHHHHH
Confidence 233333344444443345678889999 999999999999999 5 333334556788774 5666665543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.92 E-value=6.2e-05 Score=77.78 Aligned_cols=124 Identities=16% Similarity=0.117 Sum_probs=89.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.+.+.. ...-.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f---~~~~~~~~~~------------------~~kp~ 157 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF---DSITTSEEAG------------------FFKPH 157 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEEHHHHT------------------BCTTS
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc---ceeEeccccC------------------CCCcC
Confidence 5678999999999999 999999999999898999999885321 1222221110 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCC---eeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKAD---IGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~Ad---vGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+.++++||+. ||+.|.+.|+ +++++| ++.+..++.||+++. ++..+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHH
Confidence 4334445555544445688889997 9999999999 688888 666777779999986 5677766554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.9e-05 Score=81.68 Aligned_cols=126 Identities=10% Similarity=0.072 Sum_probs=91.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 157 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF---DHVLSVDAVR------------------LYKTA 157 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC---SEEEEGGGTT------------------CCTTS
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc---CEEEEecccC------------------CCCcC
Confidence 46789999999999999999999999999999988989885421 1222222111 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee----cCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM----GITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam----g~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
|+--..+.+.+.-..+.++++||+.||+.|.+.|+++++| + ++.+..+..+|+++. ++..+...+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 158 PAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp HHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 4444445555544445678889999999999999999999 5 555556778999886 67777776653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.1e-05 Score=81.12 Aligned_cols=124 Identities=10% Similarity=0.111 Sum_probs=86.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. ...-.
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 154 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF---DHLISVDEVR------------------LFKPH 154 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC---SEEEEGGGTT------------------CCTTC
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc---ceeEehhhcc------------------cCCCC
Confidence 56789999999999999999999999999899988999885321 1222222110 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecC---CccHhhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI---TGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~---~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|.--..+.+.+.-..+.++++||+.||+.|.+.|+++++|-. ++.+..+..+|+++. ++..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 222 (230)
T 3um9_A 155 QKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASR 222 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHT
T ss_pred hHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHH
Confidence 344444555554444567888999999999999999999921 444555678899886 45555543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.4e-05 Score=83.30 Aligned_cols=124 Identities=18% Similarity=0.093 Sum_probs=84.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. .....
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 168 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF---KYIAGSNLDG------------------TRVNK 168 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC---SEEEEECTTS------------------CCCCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE---EEEEeccccC------------------CCCCC
Confidence 46899999999999999999999999999999999999985321 1122211110 01112
Q ss_pred HHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCe---eEeecCCccHh-hhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADI---GIAMGITGSEV-SKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~~~-a~~aad~vl~~~~~~~i~~~ 809 (961)
|.--..+.+.+.-. .+.++++||+.||+.|.+.|++ ++++|....+. .+..||+++. ++..+...
T Consensus 169 ~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~ 238 (240)
T 3sd7_A 169 NEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDI 238 (240)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHH
T ss_pred HHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHH
Confidence 22223344444444 5568889999999999999999 88777333233 3578999886 45556544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.85 E-value=2.4e-05 Score=77.81 Aligned_cols=126 Identities=15% Similarity=0.124 Sum_probs=80.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcC--CCCCCCCCceeEechhhccCCHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHP---------------CTAKAIAIKCH--ILSETSSDDNVFTGTDLRKITDEE 725 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~g--i~~~~~~~~~v~~g~~~~~~~~~~ 725 (961)
++.|++.++++.|+++|+++.++|+... ..+..+.+++| +.. ++.......
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-------~~~~~~~~~----- 94 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA-------IFMCPHGPD----- 94 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE-------EEEECCCTT-----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE-------EEEcCCCCC-----
Confidence 5789999999999999999999999875 45566666777 311 110000000
Q ss_pred HHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC---eeEeecCCccHhhh----hccceEe
Q psy6866 726 LKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKAD---IGIAMGITGSEVSK----QTADMIL 798 (961)
Q Consensus 726 ~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad---vGIamg~~g~~~a~----~aad~vl 798 (961)
...-...-.|+-=..+.+.+.-..+.+.|+||+.||..|.+.|+ |++++| .+..... ..+|+++
T Consensus 95 --------~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v~ 165 (179)
T 3l8h_A 95 --------DGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRVC 165 (179)
T ss_dssp --------SCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEEE
T ss_pred --------CCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEEe
Confidence 00001122233333444555444566888999999999999999 578777 4444433 4578888
Q ss_pred ecCCchHHHHHHH
Q psy6866 799 MDDNFASIVLGIE 811 (961)
Q Consensus 799 ~~~~~~~i~~~i~ 811 (961)
. ++..+...+.
T Consensus 166 ~--~l~el~~~l~ 176 (179)
T 3l8h_A 166 E--DLAAVAEQLL 176 (179)
T ss_dssp S--SHHHHHHHHH
T ss_pred c--CHHHHHHHHH
Confidence 6 5666665543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.85 E-value=9.3e-06 Score=81.87 Aligned_cols=118 Identities=15% Similarity=0.134 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+.+++.+.++.|++.|+++.++|+....... ..+.+|+.... ..++.+.+. -..+..
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f---~~~~~~~~~------------------~~~Kp~ 142 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF---TEILTSQSG------------------FVRKPS 142 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE---EEEECGGGC------------------CCCTTS
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe---eeEEecCcC------------------CCCCCC
Confidence 46789999999999999999999999988777 77777774310 111211110 001122
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecCCccHhhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGITGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+--..+.+.+.-..+.++++||+.||.+|++.|+++ ++|+ +|. . .||+++. ++..+...
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~ 203 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRI 203 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHH
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHH
Confidence 3333455555554445678889999999999999997 8887 665 2 6888875 45555543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.81 E-value=1.7e-05 Score=88.98 Aligned_cols=112 Identities=16% Similarity=0.153 Sum_probs=74.5
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe-
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA- 739 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a- 739 (961)
--.++|++++.|+.|+++|++|+|+||.....++.+|+++|+.-.... ..|+ |..+..-.+ ..+-.
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~-~~Vi-g~~l~~~~d-----------G~~tg~ 285 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE-EKVL-GLRLMKDDE-----------GKILPK 285 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG-GGEE-EECEEECTT-----------CCEEEE
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc-ceEE-EeEEEEecC-----------Cceeee
Confidence 345789999999999999999999999999999999999987321111 1111 111110000 00111
Q ss_pred ------ecCHHHHHHHHHHHhhc--C-CEEEEEcCCCCCHhhhhh-CCeeEeecCC
Q psy6866 740 ------RTSPLQKLRIVELYQSL--D-EIVAVTGDGVNDAPALKK-ADIGIAMGIT 785 (961)
Q Consensus 740 ------r~~p~~K~~iv~~l~~~--g-~~V~~vGDG~ND~~al~~-AdvGIamg~~ 785 (961)
-+..+.|...|+.+.+. | ..++++|||.||.+||++ +|.++.+.++
T Consensus 286 ~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 286 FDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp ECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred ecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 13457899999876432 1 235566999999999986 6666665544
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.80 E-value=3.1e-05 Score=80.15 Aligned_cols=122 Identities=16% Similarity=0.106 Sum_probs=81.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+. -...-.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~------------------~~~Kp~ 161 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF---DSIIGSGDT------------------GTIKPS 161 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC---SEEEEETSS------------------SCCTTS
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe---eeEEccccc------------------CCCCCC
Confidence 46889999999999999999999999999999999999985321 112222110 011223
Q ss_pred HHHHHHHHHHHhhcCC-EEEEEcCCCCCHhhhhhCCe-eEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDE-IVAVTGDGVNDAPALKKADI-GIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~-~V~~vGDG~ND~~al~~Adv-GIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+ .++++||+.||+.|.+.|++ +|.++ ++.+ ..+|.++. ++..+...+.
T Consensus 162 ~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 162 PEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp SHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 3334455555554444 67888999999999999996 77776 5443 34566654 5666665543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=3.8e-05 Score=80.53 Aligned_cols=122 Identities=18% Similarity=0.240 Sum_probs=83.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. ...-.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f---~~~~~~~~~~------------------~~Kp~ 172 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF---SEMLGGQSLP------------------EIKPH 172 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC---SEEECTTTSS------------------SCTTS
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE---EEEEecccCC------------------CCCcC
Confidence 56789999999999999999999999999999999999985321 1233322111 01223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe-ec--CC-ccHhhhhccceEeecCCchHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA-MG--IT-GSEVSKQTADMILMDDNFASIV 807 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa-mg--~~-g~~~a~~aad~vl~~~~~~~i~ 807 (961)
|+--..+++.+.-..+.++++||+.||++|.+.|+++++ +. .. +.+..+..||+++. ++..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~ 239 (243)
T 2hsz_A 173 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADIL 239 (243)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGG
T ss_pred HHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHH
Confidence 344445555555445568899999999999999998844 32 11 23445677899885 455443
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.78 E-value=6.9e-05 Score=79.65 Aligned_cols=127 Identities=17% Similarity=0.096 Sum_probs=86.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.+.+.. ...-.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~------------------~~kp~ 170 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP--ASTVFATDVV------------------RGRPF 170 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC--SEEECGGGSS------------------SCTTS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC--ceEecHHhcC------------------CCCCC
Confidence 467899999999999999999999999988888888888653210 1222222111 11223
Q ss_pred HHHHHHHHHHHhhcC-CEEEEEcCCCCCHhhhhhCC---eeEeecCC-----------------------ccHhhh-hcc
Q psy6866 743 PLQKLRIVELYQSLD-EIVAVTGDGVNDAPALKKAD---IGIAMGIT-----------------------GSEVSK-QTA 794 (961)
Q Consensus 743 p~~K~~iv~~l~~~g-~~V~~vGDG~ND~~al~~Ad---vGIamg~~-----------------------g~~~a~-~aa 794 (961)
|.--..+.+.+.-.. +.++|+||+.||+.|.+.|+ |+|++|.+ +.+..+ ..+
T Consensus 171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 250 (277)
T 3iru_A 171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGA 250 (277)
T ss_dssp SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCC
Confidence 333345555555455 67889999999999999999 67877732 123333 348
Q ss_pred ceEeecCCchHHHHHHH
Q psy6866 795 DMILMDDNFASIVLGIE 811 (961)
Q Consensus 795 d~vl~~~~~~~i~~~i~ 811 (961)
|+++. ++..+..++.
T Consensus 251 d~v~~--~~~el~~~l~ 265 (277)
T 3iru_A 251 HYVID--SVADLETVIT 265 (277)
T ss_dssp SEEES--SGGGTHHHHH
T ss_pred CEEec--CHHHHHHHHH
Confidence 99986 5666666554
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.78 E-value=3.1e-05 Score=79.98 Aligned_cols=125 Identities=21% Similarity=0.206 Sum_probs=85.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+. ....-.
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f---~~i~~~~~~------------------~~~Kp~ 141 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF---DLIVGGDTF------------------GEKKPS 141 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC---SEEECTTSS------------------CTTCCT
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh---eEEEecCcC------------------CCCCCC
Confidence 56899999999999999999999999999899999999974311 122222211 012234
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecC-CccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGI-TGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~-~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+-...+++.+.-..+.++++||+.||+.|.+.|++. |++.. .+.... ..+|+++. ++..+...+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 142 PTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp THHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred hHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 4555555666654455688999999999999999987 55441 222222 56788875 5677766554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.78 E-value=1.5e-05 Score=86.90 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEee-cCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILM-DDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~-~~~~~~i~~~i~ 811 (961)
..|...++.+.+. | +.++++||+.||.+|++.|++|+||| ++.+..++.||+++. +++-+++.++++
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 4788888887653 2 35778899999999999999999999 888888999999999 888899998876
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=3.1e-05 Score=80.07 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=78.5
Q ss_pred CCCCChHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKA-GIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+...-. .++.+.+. ..+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---~~~~~~~~-------------------~~~~ 150 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP---FGAFADDA-------------------LDRN 150 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS---CEECTTTC-------------------SSGG
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC---cceecCCC-------------------cCcc
Confidence 3678999999999999 99999999999988888888888854211 12222211 0111
Q ss_pred CHHHH--HHHHHHHh--hcCCEEEEEcCCCCCHhhhhhCC---eeEeecCCccHh-hhh-ccceEeecCCchHHHHHH
Q psy6866 742 SPLQK--LRIVELYQ--SLDEIVAVTGDGVNDAPALKKAD---IGIAMGITGSEV-SKQ-TADMILMDDNFASIVLGI 810 (961)
Q Consensus 742 ~p~~K--~~iv~~l~--~~g~~V~~vGDG~ND~~al~~Ad---vGIamg~~g~~~-a~~-aad~vl~~~~~~~i~~~i 810 (961)
.|..+ ..+.+.+. -..+.++++||+.||..|.+.|+ +++++| .+... .+. .||+++.+ +..+...+
T Consensus 151 k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 151 ELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp GHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred chHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 11111 22233333 22346788899999999999999 666666 33333 222 38988864 44444433
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.76 E-value=5.1e-05 Score=76.85 Aligned_cols=117 Identities=12% Similarity=0.101 Sum_probs=83.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. .....
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 147 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF---DIVLSGEEFK------------------ESKPN 147 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEEGGGCS------------------SCTTS
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe---eeEeeccccc------------------CCCCC
Confidence 46789999999999999999999999999999999999985421 1222222111 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCc-cHhhhhccceEeec
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG-SEVSKQTADMILMD 800 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g-~~~a~~aad~vl~~ 800 (961)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++++|..++ ....+..||+++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~ 206 (214)
T 3e58_A 148 PEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS 206 (214)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS
T ss_pred hHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH
Confidence 34444555555544456888999999999999999999886333 33445778888863
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00013 Score=70.56 Aligned_cols=143 Identities=22% Similarity=0.256 Sum_probs=83.5
Q ss_pred CcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHH
Q psy6866 449 KTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGIL 528 (961)
Q Consensus 449 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all 528 (961)
..||+|-|.+.++++...+. ...++++.+++.++. .+..|...|++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g------------------~~e~elL~lAAs~E~----------------~SeHPla~AIv 58 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG------------------VDEKTLADAAQLASL----------------ADETPEGRSIV 58 (156)
T ss_dssp --------CEEEEEEEECTT------------------SCHHHHHHHHHHTTS----------------SCCSHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCC------------------CCHHHHHHHHHHHhC----------------cCCCHHHHHHH
Confidence 46999999999999864321 012346777766542 12346666999
Q ss_pred Hhhccc-ccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHH
Q psy6866 529 HFIQPR-IKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYEL 607 (961)
Q Consensus 529 ~~~~~~-~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~ 607 (961)
++++.. +......... .....+|++..+++.+.+ +| ..+.+|++..|.+.+... |. .+. ..+
T Consensus 59 ~~A~~~~~l~~~~~~~~--~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~~~~----gi--~~~----~~~ 121 (156)
T 1svj_A 59 ILAKQRFNLRERDVQSL--HATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEAN----GG--HFP----TDV 121 (156)
T ss_dssp HHHHHHTTCCCCCHHHH--TCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHHHHH----TC--CCC----HHH
T ss_pred HHHHHhcCCCccccccc--ccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHHHHc----CC--CCc----HHH
Confidence 888753 2221110000 123468888777544432 34 356789998887776531 11 112 135
Q ss_pred HHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCC
Q psy6866 608 EDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRP 666 (961)
Q Consensus 608 ~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~ 666 (961)
.+.++.++.+|.+++.+| .|.+++|++++.|++||
T Consensus 122 ~~~~~~la~~G~T~v~VA------------------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 122 DQKVDQVARQGATPLVVV------------------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHHHHTTCEEEEEE------------------------ETTEEEEEEEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEEE------------------------ECCEEEEEEEEecCCCC
Confidence 667788999999999998 23489999999999996
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=3.8e-05 Score=82.38 Aligned_cols=126 Identities=8% Similarity=0.007 Sum_probs=85.2
Q ss_pred CCCCChHHHHHHHHHcCC--EEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 663 PPRPAVPDAIDACHKAGI--RVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi--~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
++.|++.++++.|++.|+ ++.++|+.....+..+.+.+|+...- ..++.+.+... ......
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f---d~v~~~~~~~~--------------~~~~~K 204 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF---DGLTYCDYSRT--------------DTLVCK 204 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC---SEEECCCCSSC--------------SSCCCT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc---ceEEEeccCCC--------------cccCCC
Confidence 567899999999999999 99999999999999999999985421 12222211100 001122
Q ss_pred cCHHHHHHHHHHHhhcC-CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhh------hhccceEeecCCchHHHH
Q psy6866 741 TSPLQKLRIVELYQSLD-EIVAVTGDGVNDAPALKKADIGIAMGITGSEVS------KQTADMILMDDNFASIVL 808 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g-~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a------~~aad~vl~~~~~~~i~~ 808 (961)
-.|+--..+.+.+.-.. +.++++||+.||..|.+.|++|.+|+. +.+.. ...||+++. ++..+..
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~ad~vi~--sl~el~~ 276 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHL-VENEVNEILGQTPEGAIVIS--DILELPH 276 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEE-CSCCC----CCCCTTCEEES--SGGGGGG
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEE-cCCccccccccCCCCCEEeC--CHHHHHH
Confidence 33343344445554444 678899999999999999999999984 33322 337788876 4555543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=8.6e-05 Score=77.34 Aligned_cols=124 Identities=10% Similarity=0.078 Sum_probs=83.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~Kp~ 163 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL---DSCLSADDLK------------------IYKPD 163 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEEGGGTT------------------CCTTS
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc---CEEEEccccC------------------CCCCC
Confidence 57799999999999999999999999999999999999985321 1222222111 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCccHhhhhcc-ceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITGSEVSKQTA-DMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~~~a~~aa-d~vl~~~~~~~i~~~i 810 (961)
|+--..+.+.+.-..+.++++||+.||+.|.+.|++ ++..| .+.+..+..+ |+++. ++..+...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 164 PRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHHHH
Confidence 444444555554444567788999999999999994 45445 3333334556 88875 566666544
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=1.7e-05 Score=83.61 Aligned_cols=67 Identities=15% Similarity=0.100 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhc-------cceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQT-------ADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~a-------ad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..++. ||+++.+++-+++.++++
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 3678777777653 245778899999999999999999999 888888885 889998888889988876
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.71 E-value=4.2e-05 Score=79.88 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=87.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHh-cCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILET-NKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~-~~~~v~ar~ 741 (961)
++.|++.++++.|+++|+++.++|+.....+..+.+ |+... ..++.+.....- ..+.....+ .+..++ +.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~----~~v~~~~~~~~~--~~~~~~~~kp~p~~~~-~~ 147 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK----DRIYCNHASFDN--DYIHIDWPHSCKGTCS-NQ 147 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG----GGEEEEEEECSS--SBCEEECTTCCCTTCC-SC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC----CeEEeeeeEEcC--CceEEecCCCCccccc-cc
Confidence 678999999999999999999999999988888877 66331 123333221100 000000000 000011 11
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhc--cceEeecCCchHHHHHHH
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQT--ADMILMDDNFASIVLGIE 811 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~a--ad~vl~~~~~~~i~~~i~ 811 (961)
...+|..+++.+.-..+.++|+||+.||+.|.+.|++.++.+ ...+...+. +|+++. ++..+...+.
T Consensus 148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~ 216 (236)
T 2fea_A 148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIE 216 (236)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHH
T ss_pred cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHH
Confidence 244688888888767788999999999999999999998753 222223332 677664 6777776654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=8.6e-05 Score=76.17 Aligned_cols=136 Identities=16% Similarity=0.119 Sum_probs=82.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH---------------PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~---------------~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~ 727 (961)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.- +..+..+........
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----~~~~~~~~~~~~~~~---- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL----DGIYYCPHHPQGSVE---- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC----SEEEEECCBTTCSSG----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce----EEEEECCcCCCCccc----
Confidence 678999999999999999999999998 466777788888741 111222110000000
Q ss_pred HHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe----eEeecCCccHhhhhccceEeecCCc
Q psy6866 728 DILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI----GIAMGITGSEVSKQTADMILMDDNF 803 (961)
Q Consensus 728 ~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv----GIamg~~g~~~a~~aad~vl~~~~~ 803 (961)
.........+-.|+--..+.+.+.-..+.++|+||+.||+.+.+.|++ ++..|....+.....+|+++. ++
T Consensus 122 ---~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l 196 (211)
T 2gmw_A 122 ---EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SL 196 (211)
T ss_dssp ---GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CG
T ss_pred ---ccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CH
Confidence 000000112233443444455554344567899999999999999994 444442222333445888875 57
Q ss_pred hHHHHHHH
Q psy6866 804 ASIVLGIE 811 (961)
Q Consensus 804 ~~i~~~i~ 811 (961)
..+...+.
T Consensus 197 ~el~~~l~ 204 (211)
T 2gmw_A 197 ADLPQAIK 204 (211)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 77766543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0004 Score=72.27 Aligned_cols=124 Identities=15% Similarity=0.164 Sum_probs=82.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. ...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~Kp~ 152 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF---EHVIISDFEG------------------VKKPH 152 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC---SEEEEGGGGT------------------CCTTC
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc---cEEEEeCCCC------------------CCCCC
Confidence 46789999999999999999999999988888888999875321 1222222110 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEee---cCCccHhhh---hccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAM---GITGSEVSK---QTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIam---g~~g~~~a~---~aad~vl~~~~~~~i~~~i 810 (961)
|+--..+.+.+.-..+.++++||+. ||..|.+.|+++.+. | .+..... ..+|+++. ++..+...+
T Consensus 153 ~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~l 224 (241)
T 2hoq_A 153 PKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEVL 224 (241)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHHH
Confidence 3333344444443445678899998 999999999987654 4 3333333 26888875 566666544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.65 E-value=4.4e-05 Score=80.61 Aligned_cols=128 Identities=12% Similarity=0.066 Sum_probs=85.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...- +..++.+.+.. ....-.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~i~~~~~~~-----------------~~~Kp~ 170 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA--GEHIYDPSWVG-----------------GRGKPH 170 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH--CSCEECGGGGT-----------------TCCTTS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc--cceEEeHhhcC-----------------cCCCCC
Confidence 45789999999999999999999999999999999998874210 01022222110 012222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecCCc-------cHhh-hhccceEeecCCchHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGITG-------SEVS-KQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~~g-------~~~a-~~aad~vl~~~~~~~i~~~i~~ 812 (961)
|+--..+.+.+.-..+.++++||+.||+.|.+.|+++ |.+. .| .+.. ...||+++. ++..+...+..
T Consensus 171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~~ 246 (259)
T 4eek_A 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALAE 246 (259)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHHh
Confidence 3333444454444446688999999999999999998 4443 33 2233 345899886 67777776653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.65 E-value=8.9e-05 Score=76.64 Aligned_cols=124 Identities=12% Similarity=0.116 Sum_probs=85.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~Kp~ 153 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF---DHLLSVDPVQ------------------VYKPD 153 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEESGGGT------------------CCTTS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh---heEEEecccC------------------CCCCC
Confidence 46799999999999999999999999999888888999885321 1222222111 12334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecC---CccHhhhhccceEeecCCchHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI---TGSEVSKQTADMILMDDNFASIVLG 809 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~---~g~~~a~~aad~vl~~~~~~~i~~~ 809 (961)
|+--..+.+.+.-..+.++++||+.||..|.+.|++++++-. +..+..+..+|+++. ++..+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~ 221 (232)
T 1zrn_A 154 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 221 (232)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHH
Confidence 444445555554444567788999999999999999998832 222334566888875 45555443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00013 Score=74.88 Aligned_cols=116 Identities=8% Similarity=0.049 Sum_probs=78.6
Q ss_pred CCCCChHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAG-IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~ag-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.+++.+.++.|++.| +++.++|+........+.+.+|+.... ..+++..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f----------------------------~~~~~~~ 156 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF----------------------------DHIEVMS 156 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC----------------------------SEEEEES
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh----------------------------heeeecC
Confidence 46789999999999999 999999999888888888888874321 1133333
Q ss_pred CH--HHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEee-------cCCccHhhhh-ccceEeecCCchHHHHH
Q psy6866 742 SP--LQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAM-------GITGSEVSKQ-TADMILMDDNFASIVLG 809 (961)
Q Consensus 742 ~p--~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIam-------g~~g~~~a~~-aad~vl~~~~~~~i~~~ 809 (961)
.| +--..+.+.+.-..+.++++||+. ||..|.+.|++++++ | .+.+..+. ++|+++. ++..+...
T Consensus 157 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g-~~~~~~~~~~~d~v~~--~l~el~~~ 232 (234)
T 3ddh_A 157 DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWK-HEVTETFAHERLKQVK--RLDDLLSL 232 (234)
T ss_dssp CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCC-CC---CCCCTTEEECS--SGGGHHHH
T ss_pred CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccc-cCCcccccCCCceecc--cHHHHHHh
Confidence 33 222333333333345678889996 999999999999887 2 22222233 3488876 46666543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.59 E-value=7e-05 Score=78.21 Aligned_cols=126 Identities=15% Similarity=0.138 Sum_probs=81.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+....+. |+...-. ...++.+.+. -.....
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~-~d~i~~~~~~------------------~~~kp~ 168 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFH-KELMVTAFDV------------------KYGKPN 168 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCC-GGGEECTTTC------------------SSCTTS
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcC-cceEEeHHhC------------------CCCCCC
Confidence 5678999999999999999999999887777666666 7643210 0122333221 112223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE-eecCCccHh----hhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI-AMGITGSEV----SKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI-amg~~g~~~----a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+.++++||+.||+.|.+.|+++. .++ ++... .+..||+++. ++..+...++
T Consensus 169 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 169 PEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 33344445555444456788899999999999999844 444 44322 2346899885 6777766554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00028 Score=72.90 Aligned_cols=122 Identities=9% Similarity=0.009 Sum_probs=83.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+ .|+++.++|+..........+.+|+.... ..++.+.+.. .....
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 164 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF---KKIILSEDLG------------------VLKPR 164 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC---SEEEEGGGTT------------------CCTTS
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc---eeEEEeccCC------------------CCCCC
Confidence 46789999999999 99999999999988888888888875321 1222222110 11222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEeecCCccH-hhhhccceEeecCCchHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAMGITGSE-VSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIamg~~g~~-~a~~aad~vl~~~~~~~i~~ 808 (961)
|+--..+.+.+.-..+.++++||+. ||+.|.+.|+++++|...+.. ..+..+|+++. ++..+..
T Consensus 165 ~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~ 230 (240)
T 3qnm_A 165 PEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMN 230 (240)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHH
Confidence 3333334444433345688889995 999999999999999844442 45667899987 4555554
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.57 E-value=4.4e-05 Score=80.18 Aligned_cols=116 Identities=17% Similarity=0.157 Sum_probs=74.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHH-HHcCCCCCCCCCceeEech--hhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIA-IKCHILSETSSDDNVFTGT--DLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia-~~~gi~~~~~~~~~v~~g~--~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
++.+++.++++.|++.|+++.++|+.........- +..|+...- ..++.+. +. -..
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f---~~~~~~~~~~~------------------~~~ 170 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF---SHIVLGDDPEV------------------QHG 170 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS---SCEECTTCTTC------------------CSC
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe---eeEEecchhhc------------------cCC
Confidence 57889999999999999999999999876554432 212332110 1122221 10 011
Q ss_pred ecCHHHHHHHHHHHhhcC--CEEEEEcCCCCCHhhhhhCC---eeEeecCCccHhhhhccceEeec
Q psy6866 740 RTSPLQKLRIVELYQSLD--EIVAVTGDGVNDAPALKKAD---IGIAMGITGSEVSKQTADMILMD 800 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g--~~V~~vGDG~ND~~al~~Ad---vGIamg~~g~~~a~~aad~vl~~ 800 (961)
.-.|+--..+.+.+.-.. +.++++||+.||+.|.+.|+ +++++| ++.+..+..||+++.+
T Consensus 171 Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s 235 (250)
T 3l5k_A 171 KPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS 235 (250)
T ss_dssp TTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC
T ss_pred CCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC
Confidence 122222233333333222 67889999999999999999 677778 6666678899999863
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.56 E-value=8.7e-05 Score=77.34 Aligned_cols=126 Identities=16% Similarity=0.145 Sum_probs=78.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.|++.|+++.++|+.....+....+. |+...-.. ..++.+.+. -.....
T Consensus 108 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~-~~~~~~~~~------------------~~~kp~ 167 (247)
T 3dv9_A 108 ERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA-NLMVTAFDV------------------KYGKPN 167 (247)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG-GGEECGGGC------------------SSCTTS
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC-CeEEecccC------------------CCCCCC
Confidence 5679999999999999999999999887777776666 77432100 112222211 112233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecCCccH---h-hhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGITGSE---V-SKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~~g~~---~-a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+.++++||+.||+.|.+.|+++ +.+. .|.. . .+..||+++. ++..+..++.
T Consensus 168 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 168 PEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 4444455555554445678889999999999999964 3333 3322 1 2347899886 5666665554
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.53 E-value=5.5e-05 Score=80.31 Aligned_cols=67 Identities=28% Similarity=0.282 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.++ .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+.+-+++..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHH
Confidence 3577666666442 245778899999999999999999999 888888999999998877778988775
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00012 Score=78.41 Aligned_cols=115 Identities=17% Similarity=0.075 Sum_probs=78.8
Q ss_pred CCCChHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 664 PRPAVPDAIDACHKA-GIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 664 lr~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. -..++.+.+... ....
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~----f~~i~~~~~~~~------------------~kp~ 172 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR----PEYFITANDVKQ------------------GKPH 172 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC----CSSEECGGGCSS------------------CTTS
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc----cCEEEEcccCCC------------------CCCC
Confidence 578999999999999 99999999999998888888888742 123334332110 1123
Q ss_pred HHHHHHHHHHHhh-------cCCEEEEEcCCCCCHhhhhhCCeeEee---cCCccHhhhhccceEeec
Q psy6866 743 PLQKLRIVELYQS-------LDEIVAVTGDGVNDAPALKKADIGIAM---GITGSEVSKQTADMILMD 800 (961)
Q Consensus 743 p~~K~~iv~~l~~-------~g~~V~~vGDG~ND~~al~~AdvGIam---g~~g~~~a~~aad~vl~~ 800 (961)
|+--..+.+.+.- ..+.++++||+.||..|++.|+++++| |.+..+..+..||+++.+
T Consensus 173 ~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 173 PEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp SHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred hHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 3333445555544 445678889999999999999966655 523333334458988754
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00027 Score=71.28 Aligned_cols=121 Identities=12% Similarity=0.064 Sum_probs=82.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+...- ..++.+.+.. ...-.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~Kp~ 130 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF---KGIFSAESVK------------------EYKPS 130 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEEGGGGT------------------CCTTC
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC---cEEEehhhcC------------------CCCCC
Confidence 46788999 9999999 999999999998888899999985321 1233332111 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecC---CccHhhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI---TGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~---~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--..+.+.+. .+.++|+||+.||..|.+.|+++.++-. ++.+..+..+|+++. ++..+...+
T Consensus 131 ~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 131 PKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 444455556665 4567788999999999999999987721 223333456888775 466665544
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00052 Score=70.81 Aligned_cols=125 Identities=12% Similarity=0.072 Sum_probs=83.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++. +++.++|+.....+....+.+|+.... ..++.+.+.. ...-.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~~------------------~~kp~ 160 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF---KDIFVSEDTG------------------FQKPM 160 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC---SEEEEGGGTT------------------SCTTC
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh---heEEEecccC------------------CCCCC
Confidence 5678999999999999 999999999998888888888875321 1222222110 11222
Q ss_pred HHHHHHHHHHHh-hcCCEEEEEcCCC-CCHhhhhhCCeeEeecCCc--cHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQ-SLDEIVAVTGDGV-NDAPALKKADIGIAMGITG--SEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~-~~g~~V~~vGDG~-ND~~al~~AdvGIamg~~g--~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+. -..+.++++||+. ||+.|.+.|+++..+-..+ .+..+..||+++. ++..+...+.
T Consensus 161 ~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 161 KEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp HHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred hHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 333333334443 2335688899998 9999999999954432243 4456678899986 5777776554
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.48 E-value=2.6e-05 Score=79.33 Aligned_cols=119 Identities=13% Similarity=0.162 Sum_probs=79.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+...- ..++.+.+. -..+-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f---~~~~~~~~~------------------~~~KP~ 140 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM---AVTISADDT------------------PKRKPD 140 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE---EEEECGGGS------------------SCCTTS
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc---cEEEecCcC------------------CCCCCC
Confidence 4688999999999999 999999999998888888888874310 112222110 001112
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecC--C-ccHhhhhccceEeecCCchHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI--T-GSEVSKQTADMILMDDNFASI 806 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~--~-g~~~a~~aad~vl~~~~~~~i 806 (961)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++++|.. . ..+..++ ||+++. ++..+
T Consensus 141 ~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el 204 (209)
T 2hdo_A 141 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDI 204 (209)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGG
T ss_pred cHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHH
Confidence 333344555554344568889999999999999999999742 1 2344455 898885 34444
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00035 Score=72.10 Aligned_cols=123 Identities=12% Similarity=0.103 Sum_probs=81.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++ |+++.++|+..........+.++-.. ..++.+.++. ..+..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~f-----d~i~~~~~~~------------------~~KP~ 154 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVEF-----DHIITAQDVG------------------SYKPN 154 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSCC-----SEEEEHHHHT------------------SCTTS
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCcc-----CEEEEccccC------------------CCCCC
Confidence 578999999999999 89999999998877776665543211 2233332211 12334
Q ss_pred HHHHHHHH---HHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEeecCCc----------cHhhhhccceEeecCCchHHHH
Q psy6866 743 PLQKLRIV---ELYQSLDEIVAVTGDGV-NDAPALKKADIGIAMGITG----------SEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 743 p~~K~~iv---~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIamg~~g----------~~~a~~aad~vl~~~~~~~i~~ 808 (961)
|+-....+ +.+.-..+.++++||+. ||+.|.+.|+++++|...+ .+..+..||+++. ++..+..
T Consensus 155 ~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~ 232 (240)
T 3smv_A 155 PNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAE 232 (240)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHH
Confidence 54444453 33333345678889996 9999999999999995222 1334578899986 5676766
Q ss_pred HHH
Q psy6866 809 GIE 811 (961)
Q Consensus 809 ~i~ 811 (961)
.+.
T Consensus 233 ~l~ 235 (240)
T 3smv_A 233 AHK 235 (240)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00036 Score=73.37 Aligned_cols=124 Identities=12% Similarity=0.136 Sum_probs=85.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+ |+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f---~~~~~~~~~~------------------~~Kp~ 149 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF---DAVISVDAKR------------------VFKPH 149 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEEGGGGT------------------CCTTS
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc---cEEEEccccC------------------CCCCC
Confidence 57799999999999 9999999999999999999999874321 1222222110 12233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCC-----------------------c---cHhhhhccce
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGIT-----------------------G---SEVSKQTADM 796 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~-----------------------g---~~~a~~aad~ 796 (961)
|+--..+.+.+.-..+.++++||+.||+.|.+.|+++.++... + .+..+..+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T 1qq5_A 150 PDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDF 229 (253)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSE
T ss_pred HHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCe
Confidence 4444455555543345677889999999999999999988733 1 2233456888
Q ss_pred EeecCCchHHHHHHH
Q psy6866 797 ILMDDNFASIVLGIE 811 (961)
Q Consensus 797 vl~~~~~~~i~~~i~ 811 (961)
++. ++..+...+.
T Consensus 230 ~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 230 VVP--ALGDLPRLVR 242 (253)
T ss_dssp EES--SGGGHHHHHH
T ss_pred eeC--CHHHHHHHHH
Confidence 875 5677765553
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00022 Score=74.44 Aligned_cols=122 Identities=13% Similarity=0.179 Sum_probs=80.6
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
+.|++.++++.|++.|+++.++|+.....+..+-+.+|+. .- ..++.+.+. -...-.|
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f---~~~~~~~~~------------------~~~Kp~p 168 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF---DFALGEKSG------------------IRRKPAP 168 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC---SEEEEECTT------------------SCCTTSS
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce---eEEEecCCC------------------CCCCCCH
Confidence 5689999999999999999999999888888888888874 21 123332211 0112223
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee---EeecCCcc-Hhhh-hccceEeecCCchHHHHHH
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG---IAMGITGS-EVSK-QTADMILMDDNFASIVLGI 810 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG---Iamg~~g~-~~a~-~aad~vl~~~~~~~i~~~i 810 (961)
+-=..+.+.+.-..+.++|+||+.||+.|.+.|++. +++| .+. +..+ ..||+++. ++..+...+
T Consensus 169 ~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 169 DMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 322344444443345688889999999999999994 5555 332 3333 36888875 466655443
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00019 Score=75.19 Aligned_cols=123 Identities=13% Similarity=0.106 Sum_probs=84.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++. +++.++|+........+.+.+|+.. ..++.+.+. -.....
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f-----~~~~~~~~~------------------~~~kp~ 175 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW-----DMLLCADLF------------------GHYKPD 175 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC-----SEECCHHHH------------------TCCTTS
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc-----ceEEeeccc------------------ccCCCC
Confidence 4578999999999985 9999999999988888889988841 122222110 012233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecC----Ccc---Hhh--hhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI----TGS---EVS--KQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~----~g~---~~a--~~aad~vl~~~~~~~i~~~i~ 811 (961)
|.--..+.+.+.-..+.++++||+.||+.|.+.|+++++|.. .|. +.. +..||+++. ++..+...+.
T Consensus 176 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 176 PQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 444444555554444568889999999999999999999984 122 222 567899986 5777766543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00026 Score=72.77 Aligned_cols=122 Identities=13% Similarity=0.128 Sum_probs=78.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe--e
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA--R 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a--r 740 (961)
++.+++.+.++.++. ++.++|+........+.+++|+...-. ..++.+.+.. .. .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~--~~~~~~~~~~------------------~~~~k 143 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA--PHIYSAKDLG------------------ADRVK 143 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT--TCEEEHHHHC------------------TTCCT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc--ceEEeccccc------------------cCCCC
Confidence 456788888877764 899999999988888888888753110 1122221100 01 1
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee-EeecCCccH-------hhhhc-cceEeecCCchHHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG-IAMGITGSE-------VSKQT-ADMILMDDNFASIVLGI 810 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG-Iamg~~g~~-------~a~~a-ad~vl~~~~~~~i~~~i 810 (961)
..|+--..+.+.+.-..+.++++||+.||..|++.|+++ ++++ ++.+ ..++. ||+++. ++..+...+
T Consensus 144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 223333344454543345678889999999999999998 6676 5443 35666 999885 466665544
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00029 Score=73.43 Aligned_cols=123 Identities=13% Similarity=0.124 Sum_probs=83.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.++++.|++. +++.++|+........+.+.+|+.. ..++.+.+.. ...-.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f-----~~~~~~~~~~------------------~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW-----DVIIGSDINR------------------KYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC-----SCCCCHHHHT------------------CCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe-----eEEEEcCcCC------------------CCCCC
Confidence 5678999999999997 9999999999999999999998841 1112211110 11222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCC----cc---Hh--hhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGIT----GS---EV--SKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~----g~---~~--a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|.--..+.+.+.-..+.++++||+.||+.|.+.|+++++|... |. +. .+..+|+++. ++..+...+.
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~ 247 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLR 247 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhc
Confidence 3322333333333345688899999999999999999999842 21 11 3567888886 6777777665
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00018 Score=73.34 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=76.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++ |+++.++|+.....+..+-+.+|+...- ..++.+...
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f---------------------------~~i~~~~~~ 135 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF---------------------------DGIYGSSPE 135 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC---------------------------SEEEEECSS
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe---------------------------eeeecCCCC
Confidence 467899999999999 9999999999888888888899985421 011222101
Q ss_pred HHHHHHHHHH----HhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCccHhhh-hccceEeecCCchHHH
Q psy6866 743 PLQKLRIVEL----YQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITGSEVSK-QTADMILMDDNFASIV 807 (961)
Q Consensus 743 p~~K~~iv~~----l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~~~a~-~aad~vl~~~~~~~i~ 807 (961)
+.-|..+.+. +.-..+.++++||+.||+.|.++|++ ++++|....+..+ ..+|+++.+ +..+.
T Consensus 136 ~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~ 206 (210)
T 2ah5_A 136 APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVL 206 (210)
T ss_dssp CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHH
T ss_pred CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHH
Confidence 1123333332 22223467889999999999999999 7878732233333 358988863 44444
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00078 Score=67.58 Aligned_cols=136 Identities=8% Similarity=0.016 Sum_probs=90.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHP---CTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~---~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+...- ..++...+.... .-..
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f---d~i~~~~~~~~~--------------~~~~ 96 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF---DFIYASNSELQP--------------GKME 96 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE---EEEEECCTTSST--------------TCCC
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe---EEEEEccccccc--------------cCCC
Confidence 6889999999999999999999998776 8888899999985321 112222111000 0012
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCC-CCCHhhhhhCCeeEeecCCccH-----hhh-hccceEeecCCchHHHHHHHH
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDG-VNDAPALKKADIGIAMGITGSE-----VSK-QTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG-~ND~~al~~AdvGIamg~~g~~-----~a~-~aad~vl~~~~~~~i~~~i~~ 812 (961)
+-.|+--..+++.+.-..+.++||||+ .+|+.+-+.|++....=..+.. ... ..+|.++.+.++..+..++..
T Consensus 97 KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l 176 (189)
T 3ib6_A 97 KPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLL 176 (189)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHH
Confidence 234444445555555445678899999 7999999999987543212221 111 267899987788888888876
Q ss_pred HHH
Q psy6866 813 GRL 815 (961)
Q Consensus 813 gR~ 815 (961)
.+.
T Consensus 177 ~~~ 179 (189)
T 3ib6_A 177 LKK 179 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00029 Score=70.09 Aligned_cols=107 Identities=22% Similarity=0.151 Sum_probs=69.9
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSP 743 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p 743 (961)
+.+++.+.++.|++.|+++.++|+... .+....+.+|+...- ..++.+.+. -.....|
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f---~~~~~~~~~------------------~~~kp~~ 140 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF---TEVVTSSSG------------------FKRKPNP 140 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE---EEEECGGGC------------------CCCTTSC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe---eeeeecccc------------------CCCCCCH
Confidence 578999999999999999999998864 466777778874310 112222111 0111223
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD 795 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad 795 (961)
+--..+.+.+.-. .++++||+.||..|++.|++++++- +.....++..+
T Consensus 141 ~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 141 ESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 3333444444333 5778899999999999999999886 44444455443
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00023 Score=71.39 Aligned_cols=93 Identities=9% Similarity=0.028 Sum_probs=64.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH-PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+...-. .+ .+...-
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~---~~-----------------------~~~~~~ 121 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV---HR-----------------------EIYPGS 121 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE---EE-----------------------EESSSC
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc---ee-----------------------EEEeCc
Confidence 678999999999999999999999998 788999999999854100 00 011111
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEe
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIA 781 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIa 781 (961)
.|+.-..+.+.+.-..+.++++||+.+|+.+.+.|++...
T Consensus 122 k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 122 KITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 1222222333333233467899999999999999987643
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00041 Score=73.54 Aligned_cols=125 Identities=14% Similarity=0.176 Sum_probs=85.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...- ..++.+.+. -...-.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f---~~~~~~~~~------------------~~~Kp~ 163 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF---DFVLTSEAA------------------GWPKPD 163 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC---SCEEEHHHH------------------SSCTTS
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh---hEEEeeccc------------------CCCCCC
Confidence 36799999999999999999999987654 57778888874321 112222211 112334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEeecCCccHh-----hhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAMGITGSEV-----SKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIamg~~g~~~-----a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+.++|+||+. ||+.|.+.|+++++|...+... ....+|+++. ++..+...+.
T Consensus 164 ~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~ 236 (263)
T 3k1z_A 164 PRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHH
Confidence 4555555566654456788999997 9999999999999997444321 1226888886 5666766554
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0019 Score=67.50 Aligned_cols=118 Identities=10% Similarity=0.059 Sum_probs=79.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec-
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART- 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~- 741 (961)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+..... .+++..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------~i~~~~k 162 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP----------------------------RIEVVSE 162 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC----------------------------CEEEESC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc----------------------------eeeeeCC
Confidence 45789999999999 999999999999888888888888743211 133332
Q ss_pred -CHHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEeecCCccH--------hhhhccce-EeecCCchHHHHHH
Q psy6866 742 -SPLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAMGITGSE--------VSKQTADM-ILMDDNFASIVLGI 810 (961)
Q Consensus 742 -~p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIamg~~g~~--------~a~~aad~-vl~~~~~~~i~~~i 810 (961)
.|+--..+.+.+.-..+.++++||+. ||..|.+.|++++++=..|.. .....+|+ ++. ++..+...+
T Consensus 163 p~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 240 (251)
T 2pke_A 163 KDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAV 240 (251)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHH
T ss_pred CCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHH
Confidence 33333444455544445678889999 999999999999876323321 11235776 664 566666554
Q ss_pred H
Q psy6866 811 E 811 (961)
Q Consensus 811 ~ 811 (961)
.
T Consensus 241 ~ 241 (251)
T 2pke_A 241 R 241 (251)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00095 Score=70.77 Aligned_cols=43 Identities=12% Similarity=0.111 Sum_probs=35.3
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCC
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTG---DHPCTAKAIAIKCHIL 703 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~ 703 (961)
.+.+-+++.++|++++++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 444567899999999999999999999 6676666777778874
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0044 Score=62.99 Aligned_cols=124 Identities=17% Similarity=0.180 Sum_probs=81.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...- ..++.+.+. -..+-.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f---d~~~~~~~~------------------~~~KP~ 142 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF---DVMVFGDQV------------------KNGKPD 142 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC---SEEECGGGS------------------SSCTTS
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc---ccccccccc------------------CCCccc
Confidence 45789999999999999999999999999999999999985421 122222211 112334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee----EeecCCccHhhhhc-cceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG----IAMGITGSEVSKQT-ADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG----Iamg~~g~~~a~~a-ad~vl~~~~~~~i~~~i 810 (961)
|+-=..+.+.+.-..+.+.||||+.+|+.+-++|++. +.-|.+..+...++ ++.+. + ...++..+
T Consensus 143 p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l 212 (216)
T 3kbb_A 143 PEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVL 212 (216)
T ss_dssp THHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHH
T ss_pred HHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHH
Confidence 4444455555554445688999999999999999974 33343344444444 44444 2 34455443
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0012 Score=66.22 Aligned_cols=99 Identities=14% Similarity=0.065 Sum_probs=70.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.| ++.++|+........+.+.+|+...- ..++.+.+. -.....
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f---~~~~~~~~~------------------~~~Kp~ 143 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL---LAFFTSSAL------------------GVMKPN 143 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC---SCEEEHHHH------------------SCCTTC
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc---ceEEeeccc------------------CCCCCC
Confidence 46789999999999999 99999999999888888888875321 112222111 012234
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeec
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMG 783 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg 783 (961)
|+--..+.+.+.-..+.++++||+.||+.|.+.|++...+-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 144 PAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 44444455555444456788899999999999999998875
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00037 Score=74.04 Aligned_cols=58 Identities=10% Similarity=0.205 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhh-cCCEEEEEcC----CCCCHhhhhhCC-eeEeecCCccHhhhhccceEeecCC
Q psy6866 744 LQKLRIVELYQS-LDEIVAVTGD----GVNDAPALKKAD-IGIAMGITGSEVSKQTADMILMDDN 802 (961)
Q Consensus 744 ~~K~~iv~~l~~-~g~~V~~vGD----G~ND~~al~~Ad-vGIamg~~g~~~a~~aad~vl~~~~ 802 (961)
..|..-++.|.. ..+.|+++|| |.||.+||+.|+ +|++|| ++.+.+|+.||+++.+++
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCc
Confidence 468888888811 2356788899 999999999999 699999 999999999999987654
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00067 Score=69.73 Aligned_cols=107 Identities=16% Similarity=0.094 Sum_probs=64.2
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCceeEechhh-ccCCHHH
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHP---------------CTAKAIAIKCHILSETSSDDNVFTGTDL-RKITDEE 725 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~~v~~g~~~-~~~~~~~ 725 (961)
.++.|++.++++.|++.|+++.++|+... ..+..+.+++|+.-. ......... ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----~~~~~~~~~~g~~~--- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD----MVLACAYHEAGVGP--- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS----EEEEECCCTTCCST---
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee----eEEEeecCCCCcee---
Confidence 46789999999999999999999999987 577778888887311 111110000 0000
Q ss_pred HHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 726 LKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 726 ~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
..........-.|.-=..+.+.+.-..+.++||||+.||+.+.+.|++..
T Consensus 128 -----~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -----LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -----TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -----ecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00000001111222222333444333356789999999999999999764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00047 Score=69.95 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=68.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH------cCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK------CHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~------~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
++.|++.++++.|++ |+++.++|+........+.+. .|+...- ..++.+.+.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f---~~~~~~~~~------------------ 146 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF---DKVYASCQM------------------ 146 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS---SEEEEHHHH------------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc---CeEEeeccc------------------
Confidence 457899999999999 999999999988877777666 5653211 112222110
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecC
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI 784 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~ 784 (961)
-..+-.|+--..+.+.+.-..+.++++||+.||..|.+.|+++.+|..
T Consensus 147 ~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 147 GKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPD 194 (211)
T ss_dssp TCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred CCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence 012233444445555554444568889999999999999999999873
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0063 Score=64.29 Aligned_cols=42 Identities=12% Similarity=0.161 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTG---DHPCTAKAIAIKCHILS 704 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~~ 704 (961)
.+-+++.++|++++++|++++++|| ..........+++|+..
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3446799999999999999999988 66777777778888753
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0053 Score=62.78 Aligned_cols=119 Identities=12% Similarity=0.109 Sum_probs=74.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++. +++.++|+.... -+.+|+...- ..++.+.+. -...-.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f---~~~~~~~~~------------------~~~kp~ 157 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF---AFALCAEDL------------------GIGKPD 157 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC---SEEEEHHHH------------------TCCTTS
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe---eeeEEcccc------------------CCCCcC
Confidence 4678999999999998 999999987654 2344543210 112211110 011233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEee---cCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAM---GITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIam---g~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+--..+.+.+.-..+.++++||+. ||+.|.+.|+++.++ |....+. +..+|+++. ++..+...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 158 PAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 4444455555544445688899998 999999999998887 2122222 567888886 5777766553
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.00076 Score=70.77 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=41.8
Q ss_pred HHHHHHHHHHh-hcCCEEEEEcC----CCCCHhhhhhCCe-eEeecCCccHhhhhccceE
Q psy6866 744 LQKLRIVELYQ-SLDEIVAVTGD----GVNDAPALKKADI-GIAMGITGSEVSKQTADMI 797 (961)
Q Consensus 744 ~~K~~iv~~l~-~~g~~V~~vGD----G~ND~~al~~Adv-GIamg~~g~~~a~~aad~v 797 (961)
.+|..-++.+. -..+.|+++|| |.||.+||+.|+. |++|| ++.+.+|+.||+|
T Consensus 187 ~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred CchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 36777777771 12356778899 9999999999988 99999 9999999999987
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.42 E-value=0.012 Score=62.00 Aligned_cols=123 Identities=13% Similarity=0.151 Sum_probs=82.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++ ++++.++|+.....+..+.+.+|+...- ..++.+.+.. ..+-.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f---~~i~~~~~~~------------------~~KP~ 178 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF---DAIVIGGEQK------------------EEKPA 178 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC---SEEEEGGGSS------------------SCTTC
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh---heEEecCCCC------------------CCCCC
Confidence 567999999999998 5999999999999888888999985321 1222322210 12233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCC-CCCHhhhhhCCe--eEeecCCccH---hhhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDG-VNDAPALKKADI--GIAMGITGSE---VSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG-~ND~~al~~Adv--GIamg~~g~~---~a~~aad~vl~~~~~~~i~~~i 810 (961)
|+--..+.+.+.-..+.++|+||+ .||+.+-+.|++ .|.++ .+.. .....+|+++. ++..+...+
T Consensus 179 p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 179 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 444444555554444568899995 999999999999 57775 3321 12345788775 466665544
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0017 Score=60.70 Aligned_cols=97 Identities=10% Similarity=0.060 Sum_probs=65.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+. -..+-.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~------------------~~~Kp~ 76 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV---DKVLLSGEL------------------GVEKPE 76 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS---SEEEEHHHH------------------SCCTTS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc---cEEEEeccC------------------CCCCCC
Confidence 46788999999999999999999999888877777888764321 122222110 012233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+--..+.+.+.-..+.+.|+||+.+|..+.+.|++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 44334444444433446789999999999999998743
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.00051 Score=69.32 Aligned_cols=103 Identities=12% Similarity=0.129 Sum_probs=63.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK-CHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.+.++.|++.|+++.++|+........+... .|+...- ..++.+.+. -...-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f---~~~~~~~~~------------------~~~Kp 149 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA---DHIYLSQDL------------------GMRKP 149 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHC---SEEEEHHHH------------------TCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhe---eeEEEeccc------------------CCCCC
Confidence 4678999999999999999999998654432222221 2221000 011111110 01122
Q ss_pred CHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCc
Q psy6866 742 SPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITG 786 (961)
Q Consensus 742 ~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g 786 (961)
.|+--..+.+.+.-..+.++++||+.||..|.+.|++...+...+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 194 (206)
T 2b0c_A 150 EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 194 (206)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence 344444555555544456888899999999999999998876333
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.005 Score=63.27 Aligned_cols=104 Identities=9% Similarity=-0.005 Sum_probs=69.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH------cCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIK------CHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~------~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
++.|++.++++.|++. +++.++|+........+.+. .|+...- ..++.+.+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f---d~i~~~~~~------------------ 169 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF---EKTYLSYEM------------------ 169 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC---SEEEEHHHH------------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC---CEEEeeccc------------------
Confidence 3568999999999998 99999999998888766633 4442100 111111110
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHh
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEV 789 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~ 789 (961)
-..+-.|+--..+.+.+.-..+.++++||+.||+.|.+.|+++.++. ++.+.
T Consensus 170 ~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~~~ 221 (229)
T 4dcc_A 170 KMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP-KAGED 221 (229)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTTCC
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEE-CCHHH
Confidence 11233445445555666544567888999999999999999999887 44333
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0062 Score=63.82 Aligned_cols=84 Identities=12% Similarity=0.143 Sum_probs=63.7
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHP----CTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
.++.|++.+.++.|++.|+++.++||... ..+..-.+++||...... .+
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~---------------------------~L 152 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK---------------------------TL 152 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT---------------------------TE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc---------------------------ee
Confidence 47889999999999999999999999865 466666788898542100 14
Q ss_pred EeecCHHHHHHHHHHHhhcC-CEEEEEcCCCCCHhh
Q psy6866 738 FARTSPLQKLRIVELYQSLD-EIVAVTGDGVNDAPA 772 (961)
Q Consensus 738 ~ar~~p~~K~~iv~~l~~~g-~~V~~vGDG~ND~~a 772 (961)
+-|.....|....+.+.+.| .+|+++||..+|.++
T Consensus 153 ilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 153 LLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred EecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 44433456888888887744 578999999999997
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.75 E-value=0.012 Score=65.74 Aligned_cols=137 Identities=15% Similarity=0.172 Sum_probs=81.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+++|+++.++|+.....+..+-+.+|+...-. ...++.+.+.... .+.....+ -..+-.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd-~~~Ivs~ddv~~~-----~~~~~~~k--p~~KP~ 286 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE-ADFIATASDVLEA-----ENMYPQAR--PLGKPN 286 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC-GGGEECHHHHHHH-----HHHSTTSC--CCCTTS
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcC-CCEEEeccccccc-----cccccccc--CCCCCC
Confidence 678899999999999999999999999999999889999854211 0134444432100 00000000 001222
Q ss_pred HHHHHHHHHHHh--------------hcCCEEEEEcCCCCCHhhhhhCCeeE-eecCCcc------H-hhhhccceEeec
Q psy6866 743 PLQKLRIVELYQ--------------SLDEIVAVTGDGVNDAPALKKADIGI-AMGITGS------E-VSKQTADMILMD 800 (961)
Q Consensus 743 p~~K~~iv~~l~--------------~~g~~V~~vGDG~ND~~al~~AdvGI-amg~~g~------~-~a~~aad~vl~~ 800 (961)
|+-=....+.+. -..+.++|+||+.+|+.+-++|++.. .+. .|. + .....||+++.
T Consensus 287 P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~- 364 (384)
T 1qyi_A 287 PFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVIN- 364 (384)
T ss_dssp THHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEES-
T ss_pred HHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEEC-
Confidence 322222222222 12356789999999999999999753 222 221 1 12235888886
Q ss_pred CCchHHHHHH
Q psy6866 801 DNFASIVLGI 810 (961)
Q Consensus 801 ~~~~~i~~~i 810 (961)
++..+...+
T Consensus 365 -sl~eL~~~l 373 (384)
T 1qyi_A 365 -HLGELRGVL 373 (384)
T ss_dssp -SGGGHHHHH
T ss_pred -CHHHHHHHH
Confidence 566666554
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.046 Score=57.58 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=37.0
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCC
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVT---GDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~ 703 (961)
+++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5667899999999999999999999 88888888888888874
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.72 E-value=0.02 Score=60.33 Aligned_cols=41 Identities=20% Similarity=0.266 Sum_probs=35.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVT---GDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~~ 704 (961)
.+ +++.++|++++++|++++++| |..........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 45 899999999999999999999 788888888888888853
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.15 Score=53.01 Aligned_cols=40 Identities=8% Similarity=0.041 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCC
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVT---GDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~ 703 (961)
+-+.+.++++.+++.|+++.++| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 99988888888888774
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.031 Score=56.22 Aligned_cols=90 Identities=10% Similarity=0.028 Sum_probs=58.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+++|+++.++||.....+..+.. ... ..++.+.+. -..+-.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~~-----d~v~~~~~~------------------~~~KP~ 89 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PVN-----DWMIAAPRP------------------TAGWPQ 89 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TTT-----TTCEECCCC------------------SSCTTS
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---ccC-----CEEEECCcC------------------CCCCCC
Confidence 578999999999999999999999998877755443 111 112222211 011223
Q ss_pred HHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCe
Q psy6866 743 PLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~Adv 778 (961)
|+--....+.+.-. .+.+.||||..+|+.+-++|++
T Consensus 90 p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 90 PDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp THHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred hHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 33333344444332 2467899999999999999996
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.0068 Score=63.56 Aligned_cols=84 Identities=13% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceE
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHP----CTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELV 737 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v 737 (961)
+++.|++.+.++.|++.|+++.++||... ..+..-.+++||..-.. ..+
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---------------------------~~L 152 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE---------------------------SAF 152 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG---------------------------GGE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc---------------------------cce
Confidence 47889999999999999999999999865 46666677889853110 013
Q ss_pred EeecCHHHHHHHHHHHhhcC-CEEEEEcCCCCCHhh
Q psy6866 738 FARTSPLQKLRIVELYQSLD-EIVAVTGDGVNDAPA 772 (961)
Q Consensus 738 ~ar~~p~~K~~iv~~l~~~g-~~V~~vGDG~ND~~a 772 (961)
+-|.....|....+.+.+.| .+|+++||..+|.++
T Consensus 153 ilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 153 YLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred eccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 44433355777777777664 478999999999986
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.0046 Score=63.87 Aligned_cols=44 Identities=18% Similarity=0.164 Sum_probs=31.4
Q ss_pred CCEEEEEcCC-CCCHhhhhhCCeeEe---ecCCccHhhh---hccceEeec
Q psy6866 757 DEIVAVTGDG-VNDAPALKKADIGIA---MGITGSEVSK---QTADMILMD 800 (961)
Q Consensus 757 g~~V~~vGDG-~ND~~al~~AdvGIa---mg~~g~~~a~---~aad~vl~~ 800 (961)
.+.++++||+ .||..|++.|+++++ +|....+..+ ..+|+++.+
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 3567888999 799999999998844 5622224443 468888753
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.042 Score=57.31 Aligned_cols=112 Identities=12% Similarity=0.100 Sum_probs=74.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+...- ..++.+.+. -..+-.
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F---d~i~~~~~~------------------~~~KP~ 172 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF---DFIADAGKC------------------KNNKPH 172 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC---SEECCGGGC------------------CSCTTS
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc---ceeeccccc------------------CCCCCc
Confidence 567999999999999999998877654 345667788885421 123333221 112344
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe-eEeecCCccHhhhhccceEeec
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI-GIAMGITGSEVSKQTADMILMD 800 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv-GIamg~~g~~~a~~aad~vl~~ 800 (961)
|+-=..+++.+.-..+.+.||||+.+|+.+-++|++ .|+++ +. +. ...||+++.+
T Consensus 173 p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~-~~-~~~ad~vi~~ 228 (250)
T 4gib_A 173 PEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NY-EN-LKKANLVVDS 228 (250)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CT-TT-TTTSSEEESS
T ss_pred HHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-Ch-hH-hccCCEEECC
Confidence 554455566665445568899999999999999997 44444 22 22 3458998864
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.83 E-value=0.0049 Score=64.61 Aligned_cols=52 Identities=17% Similarity=0.189 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhcCCEEEEEcC----CCCCHhhhhhCC-eeEeecCCccHhhhhccce
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGD----GVNDAPALKKAD-IGIAMGITGSEVSKQTADM 796 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGD----G~ND~~al~~Ad-vGIamg~~g~~~a~~aad~ 796 (961)
.+|..-++.|.+..+.|+++|| |.||.+||+.|+ +|++|+ ++.|..+..+++
T Consensus 186 v~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 186 WDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp CSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 4788888888765567778899 799999999996 899999 888887766544
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.62 E-value=0.036 Score=56.38 Aligned_cols=95 Identities=12% Similarity=0.079 Sum_probs=60.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+...- ..++.+.+. -..+-.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f---~~~~~~~~~------------------~~~Kp~ 152 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF---DALALSYEI------------------KAVKPN 152 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC---SEEC-----------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe---eEEEecccc------------------CCCCCC
Confidence 4679999999999999999999999866 467788888874311 111111110 011222
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCC-CHhhhhhCCeeEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVN-DAPALKKADIGIAM 782 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~N-D~~al~~AdvGIam 782 (961)
|+--..+.+.+.-. . +|+||+.+ |+.+-+.|++....
T Consensus 153 ~~~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 153 PKIFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp CCHHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 22223333433322 2 89999999 99999999987653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.065 Score=54.95 Aligned_cols=112 Identities=11% Similarity=0.091 Sum_probs=69.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.| ++.++|+.....+..+.+.+|+...- ...+....
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f---------------------------~~~~~~~~- 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV---------------------------EGRVLIYI- 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT---------------------------TTCEEEES-
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc---------------------------CeeEEecC-
Confidence 67899999999999999 99999999888888888888873210 00111111
Q ss_pred HHHHHHHHHHHh--hcCCEEEEEcCCCC---CHhhhhhCCee---EeecCC--ccHhhhh--ccceEeecCCchHHH
Q psy6866 743 PLQKLRIVELYQ--SLDEIVAVTGDGVN---DAPALKKADIG---IAMGIT--GSEVSKQ--TADMILMDDNFASIV 807 (961)
Q Consensus 743 p~~K~~iv~~l~--~~g~~V~~vGDG~N---D~~al~~AdvG---Iamg~~--g~~~a~~--aad~vl~~~~~~~i~ 807 (961)
.|..+++.+. -..+.++|+||+.| |..+-+.|++. +.-|.. ..+..++ .+|+++. ++..+.
T Consensus 147 --~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~ 219 (231)
T 2p11_A 147 --HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLV 219 (231)
T ss_dssp --SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGG
T ss_pred --ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHH
Confidence 1222232222 23457889999999 55555677753 332311 1122333 2788875 455444
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.22 E-value=0.023 Score=61.17 Aligned_cols=97 Identities=11% Similarity=0.028 Sum_probs=67.3
Q ss_pred ecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHH---HHHHHH--------cCCCCCCCCCceeEechhhccCCHHHHHH
Q psy6866 660 LYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTA---KAIAIK--------CHILSETSSDDNVFTGTDLRKITDEELKD 728 (961)
Q Consensus 660 ~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta---~~ia~~--------~gi~~~~~~~~~v~~g~~~~~~~~~~~~~ 728 (961)
.++++.|++.++++.|++.|+++.++||.....+ ...-+. .|+.. ..++.+.+.
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~---------- 249 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQREQG---------- 249 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECCTT----------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc-----hheeeccCC----------
Confidence 4678899999999999999999999999875432 233334 67721 122222111
Q ss_pred HHHhcCceEEeecCHHHHHHHHHHHhhcC-CEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 729 ILETNKELVFARTSPLQKLRIVELYQSLD-EIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 729 ~~~~~~~~v~ar~~p~~K~~iv~~l~~~g-~~V~~vGDG~ND~~al~~AdvGI 780 (961)
..+-.|+-|..+.+.+.... +.++|+||..+|+.|-++|++-.
T Consensus 250 ---------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 250 ---------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ---------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ---------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 12345777788877775443 34578999999999999998753
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.19 E-value=0.016 Score=57.13 Aligned_cols=96 Identities=16% Similarity=0.092 Sum_probs=60.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCceeEec----hhhccCCH
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD---------------HPCTAKAIAIKCHILSETSSDDNVFTG----TDLRKITD 723 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~~v~~g----~~~~~~~~ 723 (961)
++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+.. +.+++.+ .+..
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f----d~v~~s~~~~~~~~~---- 113 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF----DEVLICPHLPADECD---- 113 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE----EEEEEECCCGGGCCS----
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe----eEEEEcCCCCccccc----
Confidence 67899999999999999999999997 4566777888888741 1111221 1100
Q ss_pred HHHHHHHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 724 EELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 724 ~~~~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
..+-.|+-=..+.+.+.-..+.+.||||+.+|+.+-+.|++..
T Consensus 114 --------------~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 114 --------------CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp --------------SSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred --------------ccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0011111111112222222345779999999999999999864
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.10 E-value=0.035 Score=60.52 Aligned_cols=126 Identities=15% Similarity=0.121 Sum_probs=72.0
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc----CCCCCCCCC-ceeEec-hhhccCC-HHHHHHH---H
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKC----HILSETSSD-DNVFTG-TDLRKIT-DEELKDI---L 730 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~----gi~~~~~~~-~~v~~g-~~~~~~~-~~~~~~~---~ 730 (961)
...+.|++.+.++.|+++|++|+++||-....++.+|..+ ||..+..-. ...+.. ..-.... ..+..+- .
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccc
Confidence 3357889999999999999999999999999999999885 554321000 000100 0000000 0000000 0
Q ss_pred HhcCceEE------eecCHHHHHHHHHHHhhcC-CEEEEEcCC-CCCHhhhhh--CCeeEeecCCc
Q psy6866 731 ETNKELVF------ARTSPLQKLRIVELYQSLD-EIVAVTGDG-VNDAPALKK--ADIGIAMGITG 786 (961)
Q Consensus 731 ~~~~~~v~------ar~~p~~K~~iv~~l~~~g-~~V~~vGDG-~ND~~al~~--AdvGIamg~~g 786 (961)
.......+ -.+.-+.|..-|+...+.| .-+++.||+ ..|.+||.. ++.|+.+-++-
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~ 286 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNR 286 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECC
T ss_pred cccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEec
Confidence 00000011 1233467888888776433 346677999 579999965 55566554333
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.91 E-value=0.038 Score=58.19 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=33.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH---PCTAKAIAIKCHIL 703 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~---~~ta~~ia~~~gi~ 703 (961)
++.|++.++|+.|++.|+++.++||.. ...+...-+.+|+.
T Consensus 101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 577999999999999999999999988 44445555777885
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=92.98 E-value=0.3 Score=52.48 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=34.8
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCC
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVT---GDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~ 703 (961)
.+.+-+++.++++.|++.|++++++| |..........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566789999999999999999999 57777666666777774
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.81 E-value=0.25 Score=51.88 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=65.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKC---HILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~---gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
++.|++.++++.|+++|+++.++|.-+...+..+-+.+ |+...- ..++.+ +. - .
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f---d~i~~~-~~------------------~-~ 186 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV---DGHFDT-KI------------------G-H 186 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC---SEEECG-GG------------------C-C
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc---cEEEec-CC------------------C-C
Confidence 68899999999999999999999999988777766643 353211 112222 10 1 2
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
+-.|+-=..+.+.+.-..+.++||||..+|+.+-++|++-.
T Consensus 187 KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~ 227 (261)
T 1yns_A 187 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 227 (261)
T ss_dssp TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 33344334455555544457889999999999999999753
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.22 E-value=0.9 Score=46.83 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=31.0
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCC
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVT---GDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~ 703 (961)
.++.-+++.++++.+++.|++++++| |.........-+++|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 44555788999999999999999999 55555555555566764
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=90.32 E-value=3.3 Score=40.77 Aligned_cols=31 Identities=29% Similarity=0.357 Sum_probs=23.5
Q ss_pred HHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCC
Q psy6866 609 DKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDP 663 (961)
Q Consensus 609 ~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~ 663 (961)
+.+..+..+|..++.+| .|.+++|++++.|+
T Consensus 155 ~~~~~~~~~G~T~V~va------------------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 155 DFMTEHERKGRTAVLVA------------------------VDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHTTCEEEEEE------------------------ETTEEEEEEEEECC
T ss_pred HHHHHHHhCCCeEEEEE------------------------ECCEEEEEEEEEcC
Confidence 44566778898888777 23489999999995
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.17 E-value=0.3 Score=50.49 Aligned_cols=94 Identities=11% Similarity=0.033 Sum_probs=63.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+... +..+-+.+|+.... ..++.+.+.. ..+-.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f---d~i~~~~~~~------------------~~KP~ 151 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF---TFCADASQLK------------------NSKPD 151 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC---SEECCGGGCS------------------SCTTS
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc---cccccccccc------------------CCCCc
Confidence 4679999999999999999999998654 45566778875421 1233332211 12334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG 779 (961)
|+-=....+.+.-..+.++||||+.+|+.+-++|++-
T Consensus 152 p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~ 188 (243)
T 4g9b_A 152 PEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMR 188 (243)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 4444455555554456788999999999999999863
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=86.73 E-value=0.6 Score=53.93 Aligned_cols=97 Identities=8% Similarity=0.048 Sum_probs=61.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC------CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD------HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD------~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
++.|++.++++.|+++|+++.++|+- .......... |+...- ..++.+.+..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~f---d~i~~~~~~~----------------- 157 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHF---DFLIESCQVG----------------- 157 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTS---SEEEEHHHHT-----------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhhe---eEEEeccccC-----------------
Confidence 57899999999999999999999985 2222222211 222110 2233333221
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam 782 (961)
..+-.|+--..+.+.+.-..+.+.++||+.||+.+.+.|++....
T Consensus 158 -~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 158 -MVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp -CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred -CCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 123344444455555554445677889999999999999998765
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=85.51 E-value=1.2 Score=46.18 Aligned_cols=117 Identities=14% Similarity=0.135 Sum_probs=63.4
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCT--AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
...+.+++.++++.|+ .|+++ ++|...... +.. .+.+.. .+ ..-++.+.... ....
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~----------------~~~~~~--~l-~~~f~~~~~~~-~~~~ 181 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG----------------LLPGAG--SV-VTFVETATQTK-PVYI 181 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE----------------EEECHH--HH-HHHHHHHHTCC-CEEC
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC----------------cccCCc--HH-HHHHHHHhCCC-cccc
Confidence 3456788999999997 89997 777654310 000 000000 00 01122222111 1122
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCC-CCCHhhhhhCCee---EeecCCccHhhhh---ccceEee
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDG-VNDAPALKKADIG---IAMGITGSEVSKQ---TADMILM 799 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG-~ND~~al~~AdvG---Iamg~~g~~~a~~---aad~vl~ 799 (961)
.+-.|+-=..+.+.+.-..+.++|+||+ .||+.+.++|++. +..|....+..++ .+|+++.
T Consensus 182 ~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 3344444444455554334568899999 6999999999977 5455222223333 5888875
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=85.25 E-value=0.12 Score=52.61 Aligned_cols=87 Identities=23% Similarity=0.304 Sum_probs=53.0
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHH----HHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKA----IAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~----ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+.+++.++++.|+++|+++.++|+.....+.. +....+.+.. +.+ ...+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~~---------~~~-----------------~~~~~ 142 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT---------NMN-----------------PVIFA 142 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTT---------TBC-----------------CCEEC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCcccc---------ccc-----------------hhhhc
Confidence 35689999999999999999999986432222 3322332210 000 00111
Q ss_pred e--cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 740 R--TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 740 r--~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
. -.|+-...+ +++.|- ++|+||..+|+.+-+.|++-.
T Consensus 143 ~~KP~p~~~~~~---~~~~g~-~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 143 GDKPGQNTKSQW---LQDKNI-RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp CCCTTCCCSHHH---HHHTTE-EEEEESSHHHHHHHHHTTCEE
T ss_pred CCCCCHHHHHHH---HHHCCC-EEEEECCHHHHHHHHHCCCeE
Confidence 2 223323333 333343 889999999999999999753
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=83.98 E-value=0.92 Score=42.68 Aligned_cols=40 Identities=10% Similarity=0.003 Sum_probs=33.6
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCC
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDH---PCTAKAIAIKCHIL 703 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~---~~ta~~ia~~~gi~ 703 (961)
+-+++.++|++|+++|++++++||++ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 44689999999999999999999998 55666677777774
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=82.17 E-value=0.033 Score=55.60 Aligned_cols=40 Identities=18% Similarity=0.202 Sum_probs=33.9
Q ss_pred CCCCChHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCC
Q psy6866 663 PPRPAVPDAIDACHKA-GIRVIMVTGDHPCTAKAIAIKCHI 702 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~~gi 702 (961)
++.|++.++++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 5789999999999999 999999999887766666666655
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=81.62 E-value=0.97 Score=50.89 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=33.3
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCC------------HHHHHHHHHHcCCC
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDH------------PCTAKAIAIKCHIL 703 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~------------~~ta~~ia~~~gi~ 703 (961)
+-|++.++|+.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22366777888874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 961 | ||||
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-45 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-45 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 9e-43 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-30 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-19 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 7e-25 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 3e-22 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 8e-20 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-19 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 8e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-09 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 4e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 5e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 3e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 4e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 6e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 1e-04 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 8e-04 |
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 160 bits (405), Expect = 2e-45
Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 4/212 (1%)
Query: 458 MTVLHLSFNREIYHVKNGVDVDIQNFETNT-TYKTLVRAACLCSKAEFEPNQDNIPMRER 516
MTV H+ F+ +I+ D F+ + T+ L R A LC++A F+ Q+NI + +R
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 517 KASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLN--KYFLL 574
+GDA+E +L I+ S++ +R+ PKV E+ FNS NK+ L++H N + L+
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 575 MKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNF 634
MKGAPE I++RC++++ + + + ++ GERVL F L+L F
Sbjct: 122 MKGAPERILDRCSSILVQGKEIPLDKEMQDAF-QNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 635 PVNFKFSTDPMNFPSSGFRLIGLISLYDPPRP 666
P FKF TD +NFP+ +GL+S+ D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 166 bits (420), Expect = 2e-45
Identities = 43/423 (10%), Positives = 104/423 (24%), Gaps = 79/423 (18%)
Query: 414 VSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVK 473
V L+ S + L LG I + + ++ + +K
Sbjct: 11 VFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLK 70
Query: 474 NG---VDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHF 530
+ + D+ + + K ++
Sbjct: 71 SLGLNSNWDM----------LFIVFSIHLIDI-------------LKKLSHDEIEAFMYQ 107
Query: 531 IQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMM 590
+P +Q++ + +F V N Y L + A +
Sbjct: 108 DEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL-------- 159
Query: 591 AESDKEAFLTAEKKYELEDKIKLFASKGERVLAFA-------DLHLGQNNFPVNFKFSTD 643
++ + L+ + A + + + + + F + +
Sbjct: 160 -------HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEI 212
Query: 644 PMNFPSSGFRLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703
+ V ++ AG + + TG +L
Sbjct: 213 ILRP-----------------VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255
Query: 704 S-----ETSSDDNVFTGTDLRKITDEELK-DILETNKELVFARTSPLQKLRIVELYQSLD 757
++ +V ++ K + L + +
Sbjct: 256 PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNK 315
Query: 758 EIVAVTGDGVNDAPALKKAD---IGIAMGITGS----EVSKQTADMILMD-DNFASIVLG 809
+ V + GD + D + +K IG G+ G E+ AD ++ ++
Sbjct: 316 DDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDN 375
Query: 810 IEE 812
+ E
Sbjct: 376 LLE 378
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 151 bits (381), Expect = 9e-43
Identities = 75/160 (46%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
Query: 655 IGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-DDNVF 713
+ DPPR V +I C AGIRVIM+TGD+ TA AI + I E D +
Sbjct: 12 TLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAY 71
Query: 714 TGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPAL 773
TG + + E ++ + FAR P K +IVE QS DEI A+TGDGVNDAPAL
Sbjct: 72 TGREFDDLPLAEQREA--CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 774 KKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813
KKA+IGIAMG +G+ V+K ++M+L DDNF++IV +EEG
Sbjct: 130 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 122 bits (307), Expect = 6e-30
Identities = 64/356 (17%), Positives = 103/356 (28%), Gaps = 103/356 (28%)
Query: 114 DEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFS 173
H EE + GL+ +VKR LEK G N LP + + +++
Sbjct: 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLV 62
Query: 174 ALLWFGALLSFLAYLLEAETNEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESF 233
+L A +SF+ E E+ ++ L I + +QER + + E+
Sbjct: 63 RILLLAACISFVLAWFE---EGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEAL 119
Query: 234 AKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQDLKAENSSLTGE 293
+ P DK P +L E GE
Sbjct: 120 KEYEPAATE-------------------------QDKTPLQQKLDE-----------FGE 143
Query: 294 VEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKT 353
++ + +G +
Sbjct: 144 QL----------------------------SKVISLICVAVWLINIGHFNDPVHGGSWIR 175
Query: 354 TPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLT 413
I F +A + + VA +PEGL A +T
Sbjct: 176 GAIYY--------------------FKIA--------------VALAVAAIPEGLPAVIT 201
Query: 414 VSLTLTAKRLASKNCIVRRLQTVETLGSIRTICTDK--TGTLTQNKMTVLHLSFNR 467
L L +R+A KN IVR L +VETLG + ++ N V+ +
Sbjct: 202 TCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTA 257
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 91.3 bits (226), Expect = 1e-19
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 12/194 (6%)
Query: 759 IVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFD 818
+AV V P A I + + ++K+ A + S+ GR I++
Sbjct: 182 KIAVAL-AVAAIPEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYN 233
Query: 819 NLKKSIAYILASNIPEILPFLFYIFLGIPLPVSTVTVLCIDLGTDMWPAVSLAYEKPESN 878
N+K+ I Y+++SN+ E++ LG+P + V +L ++L TD PA +L + P+ +
Sbjct: 234 NMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLD 293
Query: 879 IMSREPRNPRTDHLVGRKLVTYAYFHLGILETLAGFLTYFHVMYDAGWDPMDLLNIRKSW 938
IM R PR+P+ + G Y + G ++ + + G + +
Sbjct: 294 IMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPG----VTYHQLT 349
Query: 939 ESNNNLEDSYHKMW 952
ED H
Sbjct: 350 HFMQCTEDHPHFEG 363
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 99.0 bits (246), Expect = 7e-25
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 34/158 (21%)
Query: 654 LIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVF 713
D + + A+ + GI+V M+TGD+ +A+AI+ + ++
Sbjct: 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 60
Query: 714 TGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPAL 773
+LV A P QK V+ Q+ E+VA GDG+NDAPAL
Sbjct: 61 ---------------------DLVIAEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPAL 98
Query: 774 KKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811
+AD+GIA+G +GS+V+ ++ D++L+ D+ +V I+
Sbjct: 99 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 90.5 bits (224), Expect = 3e-22
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 241 ATVIRNG--SVKEIDSAGLVRGDIVLLKIGDKVPADIRLIEIQ--DLKAENSSLTGEVEP 296
V R SV+ I + +V GDIV + +GDKVPADIR++ I+ L+ + S LTGE
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 297 VTCTLGATNSFAV---ESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIA 343
V + +N++F TN+ +G G+V TG +T +GKI
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIR 112
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 87.6 bits (216), Expect = 8e-20
Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 22/191 (11%)
Query: 490 KTLVRAACLCSKAEFEPNQDNIPMRE-------------RKASGDATEVGILHFIQPRIK 536
L LC+ + + N+ + K + TEV L ++
Sbjct: 51 VELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANA 110
Query: 537 SIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNK-----YFLLMKGAPEVIMERCTTMMA 591
+R K + F+ K + + +KGAPE +++RC +
Sbjct: 111 CNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV 170
Query: 592 ESDKEAFLTAEKKYELEDKIKLF--ASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPS 649
+ + +T K ++ IK + R LA A + S+
Sbjct: 171 GTTRVP-MTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSR-FMEYE 228
Query: 650 SGFRLIGLISL 660
+ +G++ +
Sbjct: 229 TDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 85.8 bits (211), Expect = 2e-19
Identities = 21/160 (13%), Positives = 50/160 (31%), Gaps = 9/160 (5%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKIT 722
R + + ++ I +++G + + F +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 723 DEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782
+ + + K ++ ++ + + GD V D A K +D+ A
Sbjct: 135 PH--------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR 186
Query: 783 GITGSEVSKQTADMILMDDNFASIVLGIEEGRLIFDNLKK 822
+E +Q + + D F I IE + + + L+
Sbjct: 187 DYLLNECREQNLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 57.7 bits (138), Expect = 8e-10
Identities = 27/202 (13%), Positives = 55/202 (27%), Gaps = 56/202 (27%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKC-------------------HILSET 706
+AI GI +++VTG+ A+A +I I +
Sbjct: 22 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLAS 81
Query: 707 SSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRIVELYQSLDEI------- 759
++ + ++ + + + + + + E+ L+
Sbjct: 82 MDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSG 141
Query: 760 -----------------------------VAVTGDGVNDAPALKKADIGIAMGITGSEVS 790
VA GDG ND A K +A+ ++
Sbjct: 142 FAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKIL 200
Query: 791 KQTADMILMDDNFASIVLGIEE 812
K+ AD + + I
Sbjct: 201 KENADYVTKKEYGEGGAEAIYH 222
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (136), Expect = 1e-09
Identities = 29/194 (14%), Positives = 60/194 (30%), Gaps = 12/194 (6%)
Query: 609 DKIKLFASKGERVLAFADLHL-GQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA 667
D++ + V + G F + PS + P
Sbjct: 28 DELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ-PSREQVQRLIAEQPPHLTPG 86
Query: 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELK 727
+ + + + ++V +++G I H+ S+ + L+ + E
Sbjct: 87 IRELVSRLQERNVQVFLISGGFRS------IVEHVASKLNIPATNVFANRLKFYFNGEYA 140
Query: 728 DILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMG-ITG 786
ET + +++++ +I+ + GDG D A AD I G
Sbjct: 141 GFDETQP--TAESGGKGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVI 197
Query: 787 SEVSKQTADMILMD 800
+ K A + D
Sbjct: 198 RQQVKDNAKWYITD 211
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 49.2 bits (116), Expect = 6e-07
Identities = 24/204 (11%), Positives = 51/204 (25%), Gaps = 54/204 (26%)
Query: 666 PAVPDAIDACHKAGIRVIMVTGDHPCT----AKAIAIKCHILSETSSDDNVFTGTDLRKI 721
++I + K G+ V +++G+ + I + E G+ +
Sbjct: 23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFF 82
Query: 722 TDEELKDILETNKELVFARTSPLQKLRIVELYQSLD------------------------ 757
++E LE + R+ + R +D
Sbjct: 83 SNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYS 142
Query: 758 -------------------------EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQ 792
+ + V GD ND P + ++ K
Sbjct: 143 WHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKA 201
Query: 793 TADMILMDDNFASIVLGIEEGRLI 816
+D + I + L+
Sbjct: 202 VSDFVSDYSYGEEIGQIFKHFELM 225
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 46.7 bits (109), Expect = 4e-06
Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 13/149 (8%)
Query: 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKIT 722
P + I G V +V+G + + E D F ++
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDI-------AVNKIKEKLGLDYAFA----NRLI 123
Query: 723 DEELKDILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM 782
++ K + E++ +I ++ E GDG ND KKA + IA
Sbjct: 124 VKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF 183
Query: 783 GITGSEVSKQTADMILMDDNFASIVLGIE 811
+ K+ AD+ + + I+ I+
Sbjct: 184 C--AKPILKEKADICIEKRDLREILKYIK 210
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.4 bits (109), Expect = 4e-06
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 751 ELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDD 801
++SL V GD ND L +A GI V ++ +
Sbjct: 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHT 188
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 46.8 bits (110), Expect = 5e-06
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 721 ITDEELKDILETNKELVFARTSP---------LQKLRIVELYQSLDEI----VAVTGDGV 767
IT+EE K++L + R P K + ++ I GDG
Sbjct: 153 ITEEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGG 212
Query: 768 NDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816
ND L+ A IG+AMG E K AD + + I ++ +I
Sbjct: 213 NDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKHFGII 260
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 44.5 bits (104), Expect = 3e-05
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 756 LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812
L+E AV GD +ND L+ A G+AMG E K AD + + ++ + ++
Sbjct: 229 LEETAAV-GDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 44.2 bits (103), Expect = 4e-05
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 756 LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812
+EI+A+ GD ND ++ A +G+A+ K+ A+ + + + IE+
Sbjct: 213 PEEIMAI-GDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 267
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 43.4 bits (101), Expect = 6e-05
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 745 QKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFA 804
+ + +EIV GD ND ++A + +AM E K+ +D++ + +N +
Sbjct: 195 LRFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDS 252
Query: 805 SIVLGIEEGRLIFDNL 820
+ +E R+ D L
Sbjct: 253 GVSYVLE--RISTDCL 266
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 757 DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEGRLI 816
+VA+ GD NDA LK A AMG +E KQ A D+N + I+ +
Sbjct: 207 QNVVAI-GDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA---V 261
Query: 817 FDNLKK 822
DN
Sbjct: 262 LDNTYP 267
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 41.9 bits (97), Expect = 2e-04
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 758 EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812
+ V V GD ND L A+ ++ +K A +L + V + +
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.0 bits (92), Expect = 8e-04
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMI 797
+ L E AV GD ND P + D +G + ++ + +I
Sbjct: 181 GKAAKILLDFYKRLGQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 961 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.98 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.95 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.92 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.86 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.2 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.08 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.01 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.97 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.96 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.9 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.86 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.84 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.81 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.77 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.76 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.71 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.7 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.53 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.5 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.22 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.66 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.66 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.16 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.16 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.09 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.07 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.58 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.57 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.3 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.29 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.28 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.86 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.61 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.51 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.28 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.0 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.33 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.1 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 93.98 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.55 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 93.18 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.46 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.43 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.26 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.8 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 91.62 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 90.37 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 89.7 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 88.5 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 88.03 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 85.44 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 80.86 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.9e-32 Score=312.86 Aligned_cols=236 Identities=25% Similarity=0.289 Sum_probs=182.3
Q ss_pred cccCCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCccccchHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhccc
Q psy6866 114 DEHLIPLEELYSILDTHPDRGLSELEVKRRLEKDGPNSLPQKYRINNVYVLVGYIFRGFSALLWFGALLSFLAYLLEAET 193 (961)
Q Consensus 114 ~~~~~~~~~l~~~l~t~~~~GLs~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~l~~~~~~~l~~~ails~~~~~~~~~~ 193 (961)
++|..+.||+++.|+||+++|||++|+++|+++||+|++++++++|+|+.++++|.+++.++|+++++++++...+..
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~-- 80 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE-- 80 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSC--
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc--
Confidence 579999999999999999999999999999999999999999999999999999999999999999999987643321
Q ss_pred CCCCCCchhhHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEECCCcccceEEEecCCCeeec
Q psy6866 194 NEEKPQDNLWLGIILALTCIVTGMFSFYQERKSSHITESFAKMIPTRATVIRNGSVKEIDSAGLVRGDIVLLKIGDKVPA 273 (961)
Q Consensus 194 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~V~R~G~~~~I~~~eLv~GDIV~l~~Gd~IPa 273 (961)
.......+..++++++++++++.++++||+|+++..++++++.+.. ..||++|+
T Consensus 81 -~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~ 134 (472)
T d1wpga4 81 -GEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPL 134 (472)
T ss_dssp -TTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHH
T ss_pred -ccccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchH
Confidence 1112234667788888899999999999999999999998876543 24666777
Q ss_pred cEEEEeeCCceeeccCccccccceeccCCCCCCccccCcceEeeeeeeeeeceEEEEEEcCCcChhhhHHhhhccccCCC
Q psy6866 274 DIRLIEIQDLKAENSSLTGEVEPVTCTLGATNSFAVESRNLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGLTNRLEKKT 353 (961)
Q Consensus 274 D~ill~g~~l~vdeS~LTGEs~pv~k~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~~~~~~~~~ 353 (961)
|.++.+ +||+.+. +.++|..+|..|.+|++...+......
T Consensus 135 d~~l~~-----------~g~~i~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (472)
T d1wpga4 135 QQKLDE-----------FGEQLSK----------------------------VISLICVAVWLINIGHFNDPVHGGSWI- 174 (472)
T ss_dssp HHHHHH-----------HHHHHHH----------------------------HHHHHHHHHHHHCCTTSSSCCSSSCSS-
T ss_pred HHHHHH-----------HHHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHHhhhhhH-
Confidence 755422 2333211 111122234444444433322221111
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHhhccccccccc
Q psy6866 354 TPIEQEVQHFMRLISMWALTLGAICFLLALYIGYNWLNACVYVIGIIVANVPEGLLATLTVSLTLTAKRLASKNCIVRRL 433 (961)
Q Consensus 354 s~l~~~~~~~~~~l~~i~~~~~~i~~i~~~~~~~~~~~~~~~~i~vlv~~vP~~L~~a~~~~l~~~~~~l~k~~ilvk~~ 433 (961)
..+.+.+..+++++++++|+|||++++++++++++||+|+|++||++
T Consensus 175 ---------------------------------~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L 221 (472)
T d1wpga4 175 ---------------------------------RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSL 221 (472)
T ss_dssp ---------------------------------SCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCT
T ss_pred ---------------------------------HHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhH
Confidence 23456667778899999999999999999999999999999999999
Q ss_pred chhhhccceeEEEecCc
Q psy6866 434 QTVETLGSIRTICTDKT 450 (961)
Q Consensus 434 ~~~e~lg~v~~i~~DKT 450 (961)
+++|++|+..+.|+|||
T Consensus 222 ~avE~~g~~~~~~~~k~ 238 (472)
T d1wpga4 222 PSVETLGRAIYNNMKQF 238 (472)
T ss_dssp THHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHh
Confidence 99999999999999988
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.98 E-value=1.9e-32 Score=269.53 Aligned_cols=149 Identities=50% Similarity=0.793 Sum_probs=141.9
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-CceeEechhhccCCHHHHHHHHHhcCceEEee
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS-DDNVFTGTDLRKITDEELKDILETNKELVFAR 740 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar 740 (961)
||+|++++++|+.||++||+|+|+|||+..||+++|+++||..++.. ....++|.++..+...+..+..+... +|+|
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--v~ar 96 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRAC--CFAR 96 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCC--EEES
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhh--hhhc
Confidence 99999999999999999999999999999999999999999876654 35678999999999999999888875 9999
Q ss_pred cCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHH
Q psy6866 741 TSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~g 813 (961)
++|+||..+|+.||++|++|+|+|||.||+|||++|||||||| +|++.|+++||+++++++|.+++++|+||
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=7.2e-31 Score=270.92 Aligned_cols=209 Identities=36% Similarity=0.623 Sum_probs=168.4
Q ss_pred eEEEEEEEcceeeeecCcccccccccC-CchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhccccc
Q psy6866 458 MTVLHLSFNREIYHVKNGVDVDIQNFE-TNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIK 536 (961)
Q Consensus 458 m~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~ 536 (961)
|+|+++|++++.+..+.........++ ..+.+..++.++++||++.+..++.+.+...+...|||+|.||+.++.+.+.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 899999999999876655444443343 4567788999999999999887776666666778999999999999998888
Q ss_pred chhhHhhcCCeEEEecCCCCCeeEEEEEEcC--CCeEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHH
Q psy6866 537 SIQDVRNTFPKVTEVPFNSLNKFHLTVHFSP--LNKYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLF 614 (961)
Q Consensus 537 ~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~--~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 614 (961)
+....+..++++.++||+|.+|+|++++..+ ++.+++|+|||||.|+++|+++.. +|...+++++.++.+.+.++.|
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~ 160 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLEL 160 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999874 356899999999999999999886 8889999999999999999999
Q ss_pred HHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCCC
Q psy6866 615 ASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRPA 667 (961)
Q Consensus 615 a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 667 (961)
+.+|+||||+|||.++.++++.+..++.+..+..|.||+|+|+++|+||||++
T Consensus 161 a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 161 GGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999999999999999888877777777778889999999999999999986
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.95 E-value=4.3e-28 Score=228.57 Aligned_cols=125 Identities=36% Similarity=0.515 Sum_probs=109.7
Q ss_pred eEEeeeeecCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHh
Q psy6866 653 RLIGLISLYDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILET 732 (961)
Q Consensus 653 ~~lG~i~~~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~ 732 (961)
+..+.++++|++|++++++|+.|+++||+++|+|||+..+|.++|++|||..
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------- 62 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------- 62 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----------------------------
Confidence 3445788999999999999999999999999999999999999999999943
Q ss_pred cCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 733 NKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 733 ~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
+|++++|++|..+|+.+|+. ++|+|+|||.||+|||++|||||||| ++++.++++||+++++++|.+|+++|+
T Consensus 63 ----v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 ----VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ----EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ----hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 99999999999999999874 68999999999999999999999999 899999999999999999999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.92 E-value=9.1e-30 Score=286.14 Aligned_cols=322 Identities=13% Similarity=0.057 Sum_probs=222.3
Q ss_pred ccchhhhccceeEEEecCcCccccCceEEEEEEEcceeeeecCcccccccccCCchHHHHHHHHHHHccCceecCCCCCc
Q psy6866 432 RLQTVETLGSIRTICTDKTGTLTQNKMTVLHLSFNREIYHVKNGVDVDIQNFETNTTYKTLVRAACLCSKAEFEPNQDNI 511 (961)
Q Consensus 432 ~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~c~~~~~~~~~~~~ 511 (961)
-+.+.|+||..+++|+|||||+|.|+|++..+..+...... ....+ +..+ ++....++|+.+.
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~------k~~g~--n~~~-dl~~~~~~~~~~~-------- 91 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL------KSLGL--NSNW-DMLFIVFSIHLID-------- 91 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHH------HHTTC--CCHH-HHHHHHHHHHHHH--------
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhh------hhcCC--ChhH-HHHHHHHHHHHHH--------
Confidence 34567999999999999999999999976432111100000 00111 1222 3445555565332
Q ss_pred ccccccccCChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccc
Q psy6866 512 PMRERKASGDATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMA 591 (961)
Q Consensus 512 ~~~~~~~~g~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~ 591 (961)
.....+++++.+++.............+..+.....+||++.+|+|.++....++.+..+.||+++.+.
T Consensus 92 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~-------- 160 (380)
T d1qyia_ 92 ---ILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH-------- 160 (380)
T ss_dssp ---HHTTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT--------
T ss_pred ---HHhhcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC--------
Confidence 123456778888887766554455556677888889999999999876654333334444555555431
Q ss_pred cCCcccccCHHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCCC--ChH
Q psy6866 592 ESDKEAFLTAEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPRP--AVP 669 (961)
Q Consensus 592 ~~~~~~~l~~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~--~~~ 669 (961)
+++..+..+...+..++.+|+|++++|++.++..+.. ...+....|++..++++|| +++
T Consensus 161 -------~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~------------~~~~~~~~g~i~~~~~i~p~~~v~ 221 (380)
T d1qyia_ 161 -------VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK------------IARTTFKTGYIYQEIILRPVDEVK 221 (380)
T ss_dssp -------CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCS------------CCSCSSCCCTTTTCCBSSCHHHHH
T ss_pred -------CcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccccc------------cchhhHhcccccccccccchhhHH
Confidence 1222333455677889999999999998765432110 1123345688999999766 999
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccC-------------CHHHHHHHHHhcCce
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKI-------------TDEELKDILETNKEL 736 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~-------------~~~~~~~~~~~~~~~ 736 (961)
++|+.|+++|++++|+|||+..+|..+++++||..... ...++++.+.... .+..+... .
T Consensus 222 ~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~-~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~------~ 294 (380)
T d1qyia_ 222 VLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE-ADFIATASDVLEAENMYPQARPLGKPNPFSYIAA------L 294 (380)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC-GGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH------H
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCC-cceEEecchhhhhhhhccccccccCCChHHHHHH------H
Confidence 99999999999999999999999999999999964221 1335555543211 11122222 2
Q ss_pred EEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCC---eeEeecCCccHhhhh----ccceEeecCCchHHHHH
Q psy6866 737 VFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKAD---IGIAMGITGSEVSKQ----TADMILMDDNFASIVLG 809 (961)
Q Consensus 737 v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Ad---vGIamg~~g~~~a~~----aad~vl~~~~~~~i~~~ 809 (961)
.++|.+|.+|..+++.++..++.|+|||||.||++|+|+|| |||+||..|++..++ .||+++. ++..+..+
T Consensus 295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~i 372 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGV 372 (380)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHH
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHHHHHHH
Confidence 67899999999999999999999999999999999999999 999999888876554 7999994 56666544
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=1.5e-25 Score=203.71 Aligned_cols=106 Identities=35% Similarity=0.540 Sum_probs=94.1
Q ss_pred eeEEEECCeE--EEEECCCcccceEEEecCCCeeeccEEEEe--eCCceeeccCccccccceeccCCCCCC---ccccCc
Q psy6866 240 RATVIRNGSV--KEIDSAGLVRGDIVLLKIGDKVPADIRLIE--IQDLKAENSSLTGEVEPVTCTLGATNS---FAVESR 312 (961)
Q Consensus 240 ~~~V~R~G~~--~~I~~~eLv~GDIV~l~~Gd~IPaD~ill~--g~~l~vdeS~LTGEs~pv~k~~~~~~~---~~~~~~ 312 (961)
.++|+|+|++ ++|+++||||||||.|++||+|||||+|++ +.++.+|||+|||||.|+.|.+++... ...+..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 6899999985 789999999999999999999999999986 445889999999999999998765422 233578
Q ss_pred ceEeeeeeeeeeceEEEEEEcCCcChhhhHHhh
Q psy6866 313 NLVFFSTNLVSGSGKGVVILTGSNTVMGKIAGL 345 (961)
Q Consensus 313 n~l~~Gt~v~~G~~~~vV~~tG~~T~~g~i~~~ 345 (961)
|++|+||.+.+|++.++|++||.+|.+|+|+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~ 114 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHh
Confidence 999999999999999999999999999999865
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.86 E-value=2.3e-22 Score=210.46 Aligned_cols=171 Identities=16% Similarity=0.207 Sum_probs=134.5
Q ss_pred CchHHHHHHHHHHHccCceecCCCCCcccccccccCChhHHHHHHhhcccccch----------------hhHhhcCCeE
Q psy6866 485 TNTTYKTLVRAACLCSKAEFEPNQDNIPMRERKASGDATEVGILHFIQPRIKSI----------------QDVRNTFPKV 548 (961)
Q Consensus 485 ~~~~~~~l~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~e~all~~~~~~~~~~----------------~~~~~~~~~~ 548 (961)
..+.+..++.++++||++.+..++.+ ..+...|+|+|.||+.++.+.+... ...+..++++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~---~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETK---GVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTT---TEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCC---CeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEE
Confidence 34667789999999999887654433 2356789999999999998655332 2235678899
Q ss_pred EEecCCCCCeeEEEEEEcCCC-----eEEEEEeCChHHHHHHhhcccccCCcccccCHHHHHHHHHHHHHH--HHhcCce
Q psy6866 549 TEVPFNSLNKFHLTVHFSPLN-----KYFLLMKGAPEVIMERCTTMMAESDKEAFLTAEKKYELEDKIKLF--ASKGERV 621 (961)
Q Consensus 549 ~~~~F~s~~k~~~~v~~~~~~-----~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--a~~G~rv 621 (961)
.++||+|.||+|++++..+++ .+.+|+|||||.|+++|+.+.. ++...+++++.++.+.+.++.+ +++|+||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRv 201 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRC 201 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEE
Confidence 999999999999999987654 3789999999999999998877 6778899999999999998886 6799999
Q ss_pred eeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeee
Q psy6866 622 LAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISL 660 (961)
Q Consensus 622 l~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~ 660 (961)
||+|||.++.+...... -+....+.+|+||+|+|++||
T Consensus 202 La~A~k~~~~~~~~~~~-~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 202 LALATRDTPPKREEMVL-DDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEEESSCCCGGGCCT-TCGGGHHHHTCSEEEEEEEEE
T ss_pred EEEEEEECCcccccccc-cchhhHHHhcCCCEEEEEECC
Confidence 99999998765332211 011122346899999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.20 E-value=1.7e-11 Score=125.60 Aligned_cols=150 Identities=19% Similarity=0.191 Sum_probs=106.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeEec-hhh---------------------
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVFTG-TDL--------------------- 718 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~~g-~~~--------------------- 718 (961)
.+.+.+.++|++|+++|++++++||+....+..+++.+++..+... ...+... ...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4667899999999999999999999999999999999987542100 0000000 000
Q ss_pred ------------------ccCCHHHHHHHHHhcCce---------EEeecCHHHHHHHHHHHhhc----CCEEEEEcCCC
Q psy6866 719 ------------------RKITDEELKDILETNKEL---------VFARTSPLQKLRIVELYQSL----DEIVAVTGDGV 767 (961)
Q Consensus 719 ------------------~~~~~~~~~~~~~~~~~~---------v~ar~~p~~K~~iv~~l~~~----g~~V~~vGDG~ 767 (961)
.....+.+.++....... +-.......|...++.+.++ .+.++++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 001223344444433221 22223345788877776542 34688899999
Q ss_pred CCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHH
Q psy6866 768 NDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 768 ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~g 813 (961)
||.+||+.|++||||| ++.+.+|+.||+|+..++.+++++++++.
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 9999999999999999 89999999999999999999999887754
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.08 E-value=1.8e-10 Score=117.80 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=102.8
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeEechhh-c-------------------
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVFTGTDL-R------------------- 719 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~~g~~~-~------------------- 719 (961)
..+.+++.+++++|++.|++++++||++...+..++...|+...... ...+...... .
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 35678899999999999999999999999999999999987542100 0011110000 0
Q ss_pred -----------------cCC---HHHHHHHHHhcCceEE-----ee--cCHHHHHHHHHHHhhc----CCEEEEEcCCCC
Q psy6866 720 -----------------KIT---DEELKDILETNKELVF-----AR--TSPLQKLRIVELYQSL----DEIVAVTGDGVN 768 (961)
Q Consensus 720 -----------------~~~---~~~~~~~~~~~~~~v~-----ar--~~p~~K~~iv~~l~~~----g~~V~~vGDG~N 768 (961)
... .+.+..........++ .. ....+|...++.+.+. .+.|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 001 1111121111111111 11 2234788888877543 234777799999
Q ss_pred CHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 769 DAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 769 D~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
|.+|++.|++||||+ ++.+.+++.||+++..++..+|++++++
T Consensus 179 D~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 999999999999999 8999999999999999999999988763
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.01 E-value=3.8e-10 Score=119.56 Aligned_cols=66 Identities=26% Similarity=0.319 Sum_probs=58.4
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
.|...++.+.+. .+.|+++|||.||.+||+.|+.|+||+ +|++.+++.||+++.+++-+++.++++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 799888888653 235777899999999999999999999 899999999999999888889988876
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=6.5e-10 Score=116.85 Aligned_cols=66 Identities=21% Similarity=0.284 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 745 QKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 745 ~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
+|...++.+.+. .+.++++|||.||.+||+.|++|+||+ ++.+.+|+.||+++..++-++++++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 699888888663 234777899999999999999999999 899999999999999888899998876
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.96 E-value=9.1e-10 Score=107.49 Aligned_cols=101 Identities=19% Similarity=0.139 Sum_probs=82.6
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecCHHHHHHH
Q psy6866 670 DAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTSPLQKLRI 749 (961)
Q Consensus 670 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~i 749 (961)
.+|+.|++.|+.+.++||+....+...++++++.. ++.... +|...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------~~~~~~--~K~~~ 84 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGKL--EKETA 84 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESCS--CHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc--------------------------------cccccc--cHHHH
Confidence 47999999999999999999999999999999843 333333 45554
Q ss_pred HHHHhh----cCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchH
Q psy6866 750 VELYQS----LDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFAS 805 (961)
Q Consensus 750 v~~l~~----~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~ 805 (961)
++.+.+ ..+.|+++||+.||.+||+.|++|+||+ ++.+.+|+.||+|+....=.+
T Consensus 85 l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~G 143 (177)
T d1k1ea_ 85 CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKG 143 (177)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTT
T ss_pred HHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCc
Confidence 444433 2467889999999999999999999999 999999999999998876443
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.90 E-value=3.9e-10 Score=118.53 Aligned_cols=67 Identities=33% Similarity=0.311 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhc-C---CEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL-D---EIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g---~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.|.++ | +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.||+|+.+++-++++++++
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4699888888653 2 34677799999999999999999999 899999999999999888899988876
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.86 E-value=6.8e-10 Score=116.15 Aligned_cols=68 Identities=28% Similarity=0.280 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
..|...++.|.++ .+.++++|||.||.+||+.|+.|+||+ +|.+.+|+.||+|..+++-+++++++++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 4788888888653 345777799999999999999999999 9999999999999998888999998863
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=2e-09 Score=109.32 Aligned_cols=123 Identities=18% Similarity=0.268 Sum_probs=90.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--CceeE-echhhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS--DDNVF-TGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~~v~-~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+++|++.++|+.||+.|++++++||.....+..+++.+|+...... ...+. +|.- .-+-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~------------------~g~~ 143 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEY------------------AGFD 143 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCE------------------EEEC
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcc------------------ccce
Confidence 4689999999999999999999999999999999999999532100 00000 1110 0011
Q ss_pred e----cCHHHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhhCCeeEeecCC-ccHhhhhccceEeecCCchH
Q psy6866 740 R----TSPLQKLRIVELYQSL--DEIVAVTGDGVNDAPALKKADIGIAMGIT-GSEVSKQTADMILMDDNFAS 805 (961)
Q Consensus 740 r----~~p~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~AdvGIamg~~-g~~~a~~aad~vl~~~~~~~ 805 (961)
. ..+..|..+++.++++ -+.+.++|||.||.+|++.||++||+|.+ ..+..++.||.++. +|..
T Consensus 144 ~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 144 ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp TTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred eeeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 1 3457899999998763 24578889999999999999999999732 34566778999885 4543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.81 E-value=2.5e-09 Score=109.01 Aligned_cols=148 Identities=12% Similarity=0.090 Sum_probs=104.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+......+...+.+...... ........+.+..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~--------~~~~~~~~~~~~k 146 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID--------WPHSCKGTCSNQC 146 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE--------CTTCCCTTCCSCC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec--------cccccccccccCC
Confidence 57899999999999999999999999999999999998875421110111111111000 0000011345678
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhh-ccceEeecCCchHHHHHHHHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQ-TADMILMDDNFASIVLGIEEGRLIFDNL 820 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~-aad~vl~~~~~~~i~~~i~~gR~~~~ni 820 (961)
|..|..+++.++..++.|.|+||+.||.+|+++||+++|++ ...+.+++ ..+++. -++|+.|...++.-..+.+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 147 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHHh
Confidence 89999999999988899999999999999999999999998 55554444 344433 458888887776554444433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.77 E-value=8.5e-09 Score=102.77 Aligned_cols=131 Identities=13% Similarity=0.161 Sum_probs=93.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
+..++....++.+ +.+.+++++|+.............++...... ....... ..........
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~----------------~~~~~~~~~~ 130 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDS----------------DRVVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE-EEEECTT----------------SCEEEEECCS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc-eeeeecc----------------cccccccccc
Confidence 3455666666665 57899999999999999999999888542110 0000000 0011334455
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIEEG 813 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~~g 813 (961)
+..+...++.++...+.|+++|||.||.+||+.||+||||+ ++.++.++++|+++.. ++..+++++...
T Consensus 131 ~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~-~~~d~~~~~~~~ 199 (206)
T d1rkua_ 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVH-TYEDLKREFLKA 199 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEEC-SHHHHHHHHHHH
T ss_pred hhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceeec-CHHHHHHHHHHH
Confidence 56666777888777888999999999999999999999996 6777777888988764 678888766643
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.76 E-value=3.4e-09 Score=111.70 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecC-CchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDD-NFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~-~~~~i~~~i~ 811 (961)
..|...++.+.+. .+.|+++|||.||.+||+.|++|+||+ +|.+.+|+.||+++..+ +..++.++++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 3677666666542 346788899999999999999999999 99999999999999755 4455666554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.71 E-value=6.7e-09 Score=108.81 Aligned_cols=67 Identities=22% Similarity=0.349 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhhc----CCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 744 LQKLRIVELYQSL----DEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 744 ~~K~~iv~~l~~~----g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
..|...++.+.++ ...|+++|||.||.+||+.|++||||| ++.+.+|+.||+++.+++-++++++++
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3788888887553 234667799999999999999999999 999999999999999999999998875
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.70 E-value=9.2e-09 Score=102.76 Aligned_cols=130 Identities=22% Similarity=0.201 Sum_probs=90.5
Q ss_pred CCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe--
Q psy6866 662 DPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA-- 739 (961)
Q Consensus 662 D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a-- 739 (961)
.++.+++.+.++.++..|..+.++||.....+....++.++..... ..+...+.... ....
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------------~~~~~~ 136 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA---NRLIVKDGKLT--------------GDVEGE 136 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE---EEEEEETTEEE--------------EEEECS
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh---hhhcccccccc--------------cccccc
Confidence 3678889999999999999999999999999999999888743110 00000000000 0000
Q ss_pred ecCHHHHHHHH----HHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeecCCchHHHHHH
Q psy6866 740 RTSPLQKLRIV----ELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 740 r~~p~~K~~iv----~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~~~~~~i~~~i 810 (961)
-..+..|...+ +.++-..+.+.++|||.||.+|++.||+|||| ++.+..++.||+++..+|+++|+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 137 VLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp SCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 01112233333 33333344577789999999999999999999 58888999999999988999887654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.53 E-value=1.1e-07 Score=97.35 Aligned_cols=44 Identities=7% Similarity=0.071 Sum_probs=39.0
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILS 704 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 704 (961)
.+...+.++++|++|+++|+.++++||++...+..+.+++++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 34445778999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.50 E-value=7.5e-08 Score=99.01 Aligned_cols=144 Identities=13% Similarity=0.111 Sum_probs=94.3
Q ss_pred hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCC----CCceeEechhhc---------c--------------
Q psy6866 668 VPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETS----SDDNVFTGTDLR---------K-------------- 720 (961)
Q Consensus 668 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~~~~v~~g~~~~---------~-------------- 720 (961)
...++.++++.|+.++++||++...+..+.+++++..+.. ....+....... .
T Consensus 23 ~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (244)
T d1s2oa1 23 HLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFE 102 (244)
T ss_dssp HHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTCT
T ss_pred HHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhcc
Confidence 3445666788999999999999999999999999865321 011111111100 0
Q ss_pred ----------------------CCH---HHHHHHHHhcCc----------eEEeecCHHHHHHHHHHHhhc-C---CEEE
Q psy6866 721 ----------------------ITD---EELKDILETNKE----------LVFARTSPLQKLRIVELYQSL-D---EIVA 761 (961)
Q Consensus 721 ----------------------~~~---~~~~~~~~~~~~----------~v~ar~~p~~K~~iv~~l~~~-g---~~V~ 761 (961)
..+ +++......... .+-.-....+|...++.+.+. | +.|+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v 182 (244)
T d1s2oa1 103 ALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTL 182 (244)
T ss_dssp TEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred cccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhEE
Confidence 001 112222211110 111122346799999888764 2 3466
Q ss_pred EEcCCCCCHhhhhhCCeeEeecCCccHhhhhccc-------eEeecCCchHHHHHHHH
Q psy6866 762 VTGDGVNDAPALKKADIGIAMGITGSEVSKQTAD-------MILMDDNFASIVLGIEE 812 (961)
Q Consensus 762 ~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad-------~vl~~~~~~~i~~~i~~ 812 (961)
++|||.||.+||+.|+.|++|| ++.+.+++.|| ++...++..+|.+++++
T Consensus 183 ~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 183 VCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 7799999999999999999999 89999999888 55556667788887764
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=2.1e-06 Score=86.52 Aligned_cols=41 Identities=7% Similarity=0.046 Sum_probs=38.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHIL 703 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 703 (961)
.+.+.+.++|++|+++|+.++++||++...+..+.+++++.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46678999999999999999999999999999999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.66 E-value=2.7e-06 Score=85.99 Aligned_cols=54 Identities=11% Similarity=0.209 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhc-CCEEEEEcC----CCCCHhhhhhCC-eeEeecCCccHhhhhccceEe
Q psy6866 744 LQKLRIVELYQSL-DEIVAVTGD----GVNDAPALKKAD-IGIAMGITGSEVSKQTADMIL 798 (961)
Q Consensus 744 ~~K~~iv~~l~~~-g~~V~~vGD----G~ND~~al~~Ad-vGIamg~~g~~~a~~aad~vl 798 (961)
..|...++.|.+. .+.|+++|| |.||.+||+.|+ .|+||+ ++.|.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 5788888888663 446777799 569999999997 699999 99999999999876
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.66 E-value=3.1e-05 Score=77.34 Aligned_cols=53 Identities=17% Similarity=0.311 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccceEeec
Q psy6866 744 LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADMILMD 800 (961)
Q Consensus 744 ~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~vl~~ 800 (961)
.+|...++.|.++.+++ ++||+.||.+||+.|+.|+||+ +|. ++.+|++.+.+
T Consensus 158 ~~Kg~al~~l~~~~~~i-~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 158 VNKGSAIRSVRGERPAI-IAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVAD 210 (229)
T ss_dssp CCHHHHHHHHHTTSCEE-EEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESS
T ss_pred CCHHHHHHHHhccccce-eecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcCC
Confidence 58999999998876655 5599999999999997776665 332 25678888864
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.16 E-value=0.00045 Score=68.83 Aligned_cols=125 Identities=17% Similarity=0.151 Sum_probs=81.3
Q ss_pred CCCCChHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEee-
Q psy6866 663 PPRPAVPDAIDACHKAG-IRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFAR- 740 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~ag-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar- 740 (961)
++-|++.++++.|++.| +++.++|+.....+..+.+..|+...- ..++.+.+ ...+
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f---d~i~~~~~-------------------~~~~k 148 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF---PFGAFADD-------------------ALDRN 148 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC---SCEECTTT-------------------CSSGG
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc---cccccccc-------------------ccccc
Confidence 34689999999999987 899999999999999999999996531 11222211 0111
Q ss_pred cCHHHHHHHHHHHhh---cCCEEEEEcCCCCCHhhhhhCC---eeEeecCCccHh-hhhccceEeecCCchHHHHHHH
Q psy6866 741 TSPLQKLRIVELYQS---LDEIVAVTGDGVNDAPALKKAD---IGIAMGITGSEV-SKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 741 ~~p~~K~~iv~~l~~---~g~~V~~vGDG~ND~~al~~Ad---vGIamg~~g~~~-a~~aad~vl~~~~~~~i~~~i~ 811 (961)
-.|.--...++.+.. ..+.+.||||+.+|..|-+.|+ |+|+.|....+. .+..||+++. +++.+.+.+.
T Consensus 149 ~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 149 ELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp GHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred chhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 111211222333322 2356889999999999999999 556666333332 3446899985 5666665543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.16 E-value=0.00035 Score=72.36 Aligned_cols=130 Identities=10% Similarity=0.123 Sum_probs=78.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC---CceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSS---DDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
++|+++++.++.|++.|+.+.++||--......+++++|+..++.. +...+++..+. .-|-
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~----------------~~~~ 198 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL----------------KGFK 198 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBE----------------EEEC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeE----------------eecc
Confidence 5899999999999999999999999999999999999998654211 01111111000 0000
Q ss_pred --ecCHHHHHHHH----HHHh--hcCCEEEEEcCCCCCHhhhhh---CCeeEeecC-C-ccH----hhhhccceEeecCC
Q psy6866 740 --RTSPLQKLRIV----ELYQ--SLDEIVAVTGDGVNDAPALKK---ADIGIAMGI-T-GSE----VSKQTADMILMDDN 802 (961)
Q Consensus 740 --r~~p~~K~~iv----~~l~--~~g~~V~~vGDG~ND~~al~~---AdvGIamg~-~-g~~----~a~~aad~vl~~~~ 802 (961)
-.....|...+ ..++ .....|.++|||.||.+|.+. ++.+++.|- + ..+ .-.++-|+|+.+|.
T Consensus 199 ~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~ 278 (291)
T d2bdua1 199 GELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEE 278 (291)
T ss_dssp SSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCC
T ss_pred CCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCC
Confidence 01112232222 1112 234567777999999999874 345554441 1 111 12367799998875
Q ss_pred chHHHH
Q psy6866 803 FASIVL 808 (961)
Q Consensus 803 ~~~i~~ 808 (961)
--.++.
T Consensus 279 ~~~v~~ 284 (291)
T d2bdua1 279 SLEVVN 284 (291)
T ss_dssp BCHHHH
T ss_pred ChhHHH
Confidence 444443
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.09 E-value=0.0006 Score=67.28 Aligned_cols=116 Identities=17% Similarity=0.183 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+...- ..++.+.+. -.++-.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F---~~i~~~~~~------------------~~~Kp~ 146 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF---DALASAEKL------------------PYSKPH 146 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEECTTS------------------SCCTTS
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc---ccccccccc------------------ccchhh
Confidence 45699999999999999999999999999999999999995321 123333221 112334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccH----hhhhccceEeec
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSE----VSKQTADMILMD 800 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~----~a~~aad~vl~~ 800 (961)
|+--..+++.+.-..+.++|+||+.+|..|-+.|++... +..+.+ .....||+++.+
T Consensus 147 ~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i-~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 147 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI-VVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEE-ECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEE-EECCCCCccchhhcCCCEEECC
Confidence 444455666665556678999999999999999997442 222222 223457887653
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.07 E-value=0.00018 Score=71.34 Aligned_cols=123 Identities=20% Similarity=0.247 Sum_probs=83.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+...- ..++.+.+. -..+..
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f---~~~~~~~~~------------------~~~kp~ 153 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF---SEMLGGQSL------------------PEIKPH 153 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC---SEEECTTTS------------------SSCTTS
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc---ccccccccc------------------cccccc
Confidence 46799999999999999999999999999999999999985421 112221110 012234
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCc-cHhhhhccceEeecCCchHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITG-SEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g-~~~a~~aad~vl~~~~~~~i~~ 808 (961)
|+--..+.+.++-..+.++|+||+.+|..+-+.|++ ++..|.+. .+.....+|+++. ++..++.
T Consensus 154 p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ 221 (224)
T d2hsza1 154 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 221 (224)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred chhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHH
Confidence 444455555665566778899999999999999986 33333111 2334456888876 5555544
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.58 E-value=0.0013 Score=66.55 Aligned_cols=96 Identities=19% Similarity=0.179 Sum_probs=70.9
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++||.+...+..+-+..|+..... ..++.+.+. ...+-.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~--d~~~~~d~~------------------~~~KP~ 158 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP--DFLVTPDDV------------------PAGRPY 158 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC--SCCBCGGGS------------------SCCTTS
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc--ccccccccc------------------cccccC
Confidence 578999999999999999999999999999999999988754211 122222211 122345
Q ss_pred HHHHHHHHHHHhh-cCCEEEEEcCCCCCHhhhhhCCe
Q psy6866 743 PLQKLRIVELYQS-LDEIVAVTGDGVNDAPALKKADI 778 (961)
Q Consensus 743 p~~K~~iv~~l~~-~g~~V~~vGDG~ND~~al~~Adv 778 (961)
|+.=...++.+.- ..+.++||||+.+|+.+=+.|++
T Consensus 159 p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 159 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred hHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 5555666666654 34678899999999999999986
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.57 E-value=0.00067 Score=66.47 Aligned_cols=120 Identities=16% Similarity=0.130 Sum_probs=80.3
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+...- ..++.+.+ ..+..
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f---d~v~~~~~--------------------~~~~~ 139 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF---DGIYGSSP--------------------EAPHK 139 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC---SEEEEECS--------------------SCCSH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc---cccccccc--------------------ccccc
Confidence 46789999999998775 88999999999999999999986421 12222211 12333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCccHhh-hhccceEeecCCchHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITGSEVS-KQTADMILMDDNFASIVL 808 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~~~a-~~aad~vl~~~~~~~i~~ 808 (961)
|+-...+++.++-..+.++||||+.||..|-++|++ +|.-|....+.. ...+|+++. ++..+..
T Consensus 140 p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~ 207 (210)
T d2ah5a1 140 ADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLA 207 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHH
T ss_pred ccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHH
Confidence 444444444444445578899999999999999997 454453333333 344899876 4555554
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.30 E-value=0.0039 Score=62.02 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=78.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+.|++.+++++|++.|+++.++|+............+|+..-........+. ....+-.
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~--------------------~~~~KP~ 186 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT--------------------KIGHKVE 186 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG--------------------GGCCTTC
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeecc--------------------ccccCCC
Confidence 56899999999999999999999999999999888888875321100011100 0123444
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee----cCCccHhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM----GITGSEVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam----g~~g~~~a~~aad~vl~ 799 (961)
|+-=....+.+.-..+.++|+||..+|+.+-++|++-... |..........++.++.
T Consensus 187 p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 187 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred cHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 4444555555554556789999999999999999986554 32222233445566654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.29 E-value=0.01 Score=58.62 Aligned_cols=125 Identities=15% Similarity=0.104 Sum_probs=81.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+ +|+++.++|+........+.+.+|+...- ..++...+. -..+-.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f---d~i~~s~~~------------------~~~KP~ 157 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF---DSITTSEEA------------------GFFKPH 157 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC---SEEEEHHHH------------------TBCTTS
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc---ccccccccc------------------cccchh
Confidence 56899999999996 58999999999999999999999985321 112222111 012233
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCC-CCCHhhhhhCCeeEee-c-CCccHhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDG-VNDAPALKKADIGIAM-G-ITGSEVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG-~ND~~al~~AdvGIam-g-~~g~~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+-=..+++.+.-....++|+||. .+|+.+-+.|++-... . ..........+|+++. ++..++.+++
T Consensus 158 ~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 227 (230)
T d1x42a1 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHH
T ss_pred hHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHHHH
Confidence 333334444454344568899997 5899998888875321 1 0223334557899876 5777777665
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.28 E-value=0.007 Score=57.77 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=74.6
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHH---------------HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHH
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCT---------------AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKD 728 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~t---------------a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~ 728 (961)
+-|++.++++.|+++|+++.++|...... ........|+... ...+.......-. .
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~cp~~p~~~~----~- 98 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD----GIYYCPHHPQGSV----E- 98 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS----EEEEECCBTTCSS----G-
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc----ceeeccccccccc----c-
Confidence 45899999999999999999999876321 0111112222110 0000000000000 0
Q ss_pred HHHhcCceEEeecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCee--Eee--cCCccHhhhhccceEeecCCch
Q psy6866 729 ILETNKELVFARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIG--IAM--GITGSEVSKQTADMILMDDNFA 804 (961)
Q Consensus 729 ~~~~~~~~v~ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvG--Iam--g~~g~~~a~~aad~vl~~~~~~ 804 (961)
.....+.+.+-.|.--..+++.+.-.-+.+.||||..+|..|=++|+++ +.+ |..-.+.....||+++. ++.
T Consensus 99 --~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~ 174 (182)
T d2gmwa1 99 --EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLA 174 (182)
T ss_dssp --GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGG
T ss_pred --cccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHH
Confidence 0000011123344444555555554445688999999999999999985 333 31223455567999886 677
Q ss_pred HHHHHHH
Q psy6866 805 SIVLGIE 811 (961)
Q Consensus 805 ~i~~~i~ 811 (961)
.+++.|+
T Consensus 175 dl~~~ik 181 (182)
T d2gmwa1 175 DLPQAIK 181 (182)
T ss_dssp GHHHHHH
T ss_pred HHHHHhc
Confidence 7777664
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.0014 Score=65.29 Aligned_cols=50 Identities=16% Similarity=0.241 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhh-cCCEEEEEcC----CCCCHhhhhhCC-eeEeecCCccHhhhhccc
Q psy6866 744 LQKLRIVELYQS-LDEIVAVTGD----GVNDAPALKKAD-IGIAMGITGSEVSKQTAD 795 (961)
Q Consensus 744 ~~K~~iv~~l~~-~g~~V~~vGD----G~ND~~al~~Ad-vGIamg~~g~~~a~~aad 795 (961)
.+|...++.|.+ ..+.|+++|| |.||.+||+.|+ .|++++ + .+..++.++
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~-~~~~~~~~~ 239 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-A-PEDTRRICE 239 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-S-HHHHHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-C-HHHHHHHHH
Confidence 467777777754 3456778899 889999999998 688876 4 455555554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.61 E-value=0.0042 Score=60.22 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=66.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++.|+++.++|+... .+..+-++.|+...- ..++...+ ....+-.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f---~~i~~s~~------------------~~~~Kp~ 139 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF---TEILTSQS------------------GFVRKPS 139 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE---EEEECGGG------------------CCCCTTS
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc---cccccccc------------------ccccchh
Confidence 4579999999999999999999998654 456677888985421 11111111 0122334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
|+--..+++.+.-..+.++||||+.+|..+-+.|++..
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~ 177 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 177 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeE
Confidence 55555566666544567899999999999999999854
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.51 E-value=0.0069 Score=56.69 Aligned_cols=90 Identities=9% Similarity=-0.024 Sum_probs=63.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeec
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDH-PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFART 741 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~ 741 (961)
++.|++.++++.|++.|+++.++|+-+ ...+..+-+..++.... ..+....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~----------------------------~~~~~~~ 97 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF----------------------------IQREIYP 97 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC----------------------------SEEEESS
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc----------------------------eeeeccc
Confidence 578999999999999999999999655 45566666777664311 1133333
Q ss_pred CH--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeE
Q psy6866 742 SP--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGI 780 (961)
Q Consensus 742 ~p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGI 780 (961)
.| +.-..+.+.+.-..+.+.|+||..+|+.+-++|++-.
T Consensus 98 kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 98 GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred CCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEE
Confidence 33 3333444555444567889999999999999998733
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.28 E-value=0.0052 Score=59.70 Aligned_cols=120 Identities=14% Similarity=0.192 Sum_probs=80.2
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|+ +++++.++|+.....+..+.++.|+...- ..++.+.+. -...-.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f---~~i~~~~~~------------------~~~KP~ 139 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRM---AVTISADDT------------------PKRKPD 139 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGE---EEEECGGGS------------------SCCTTS
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccc---ccccccccc------------------ccchhh
Confidence 45689999999997 47999999999999999999999885421 112222111 112234
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEee---cCCccHhhhhccceEeecCCchHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAM---GITGSEVSKQTADMILMDDNFASIV 807 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIam---g~~g~~~a~~aad~vl~~~~~~~i~ 807 (961)
|+--..+++.++-..+.+.||||+.+|..+-+.|++...+ | ..+....+.+|.++. ++..|+
T Consensus 140 p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 140 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred hhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 4544555555554445688899999999999999887653 3 233334556777764 455443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.00 E-value=0.024 Score=56.31 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=79.7
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.++++.|++ |+++.++|+.........-+++|+...- ..++.+.+.. ..+-+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f---d~i~~s~~~~------------------~~KP~ 166 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF---DAIVIGGEQK------------------EEKPA 166 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC---SEEEEGGGSS------------------SCTTC
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc---cccccccccc------------------cchhh
Confidence 367899999999984 8999999999999999999999985421 1222222111 12223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCC-CCHhhhhhCCeeEeecCCcc----HhhhhccceEeecCCchHHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGV-NDAPALKKADIGIAMGITGS----EVSKQTADMILMDDNFASIVLGIE 811 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~-ND~~al~~AdvGIamg~~g~----~~a~~aad~vl~~~~~~~i~~~i~ 811 (961)
|+-=..+++.+.-..+.++||||.. +|+.+-+.|++.-....++. ......+|+++. ++..+..+++
T Consensus 167 p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~ 238 (247)
T d2gfha1 167 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred hhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHH
Confidence 3322344444443345688999996 89999999998633211211 112334688876 5666766655
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.33 E-value=0.044 Score=51.92 Aligned_cols=109 Identities=22% Similarity=0.159 Sum_probs=70.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++.|++.+.++.|++.|+++.++|+-..... .+-+++|+...- ..++.+.+.. ..+-.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f---d~i~~~~~~~------------------~~KP~ 136 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF---TEVVTSSSGF------------------KRKPN 136 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE---EEEECGGGCC------------------CCTTS
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc---cccccccccc------------------ccCCC
Confidence 4679999999999999999999998766554 566788875321 1222222110 11223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecCCccHhhhhccce
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGITGSEVSKQTADM 796 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~~g~~~a~~aad~ 796 (961)
|+--..+.+.+.- +.+.|+||..+|..+-++|++-... .++.+..++..|+
T Consensus 137 p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~-v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 137 PESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHL-FTSIVNLRQVLDI 187 (187)
T ss_dssp CHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEE-CSCHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEE-ECCCCChHhhcCC
Confidence 3333444444432 3478899999999999999887543 3666666666553
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.10 E-value=0.011 Score=59.57 Aligned_cols=35 Identities=14% Similarity=0.283 Sum_probs=28.9
Q ss_pred CChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy6866 666 PAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKC 700 (961)
Q Consensus 666 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 700 (961)
+++.++|+.|+++|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78899999999999999999987766666665543
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.98 E-value=0.14 Score=49.39 Aligned_cols=136 Identities=22% Similarity=0.255 Sum_probs=89.7
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccC--C------------------H
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKI--T------------------D 723 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~--~------------------~ 723 (961)
+-|++.++++.+++. ...+++|---.+-..++|+..|+..+ .-.+..+++.+ + .
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-----~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ 155 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-----LHGTEVDFDSIAVPEGLREELLSIIDVIASLSG 155 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-----EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce-----eecccccccccCCChHHHHHHHHHhhhccCccH
Confidence 568999999999877 67777887788889999999999532 22222222221 1 1
Q ss_pred HHH-------------HHHHHhcCceEEeecCHHHHHHHHHHHhhc--CCEEEEEcCCCCCHhhhhhC----CeeEeecC
Q psy6866 724 EEL-------------KDILETNKELVFARTSPLQKLRIVELYQSL--DEIVAVTGDGVNDAPALKKA----DIGIAMGI 784 (961)
Q Consensus 724 ~~~-------------~~~~~~~~~~v~ar~~p~~K~~iv~~l~~~--g~~V~~vGDG~ND~~al~~A----dvGIamg~ 784 (961)
+++ .++++..+. +-...|..+++..-+. -...+++||++.|..||+.| ++.||.
T Consensus 156 eel~e~~d~~f~~~e~~~i~e~Vk~-----VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsF-- 228 (308)
T d1y8aa1 156 EELFRKLDELFSRSEVRKIVESVKA-----VGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-- 228 (308)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHTCBC-----CCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--
T ss_pred HHHHHHHHHHhccchHhhHHhhhcc-----cCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEe--
Confidence 111 122222221 1225666666554321 22347889999999999876 555555
Q ss_pred CccHhhhhccceEeecCCchHHHHHHHH
Q psy6866 785 TGSEVSKQTADMILMDDNFASIVLGIEE 812 (961)
Q Consensus 785 ~g~~~a~~aad~vl~~~~~~~i~~~i~~ 812 (961)
+|.+-+...||+.+.+.+..++...+..
T Consensus 229 NGN~Yal~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 229 NGNEYALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp SCCHHHHTTCSEEEECSSTHHHHHHHHH
T ss_pred cCccccccccceEEeccchhHHHHHHHH
Confidence 7999999999999999988877766653
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.55 E-value=0.0091 Score=54.59 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=60.2
Q ss_pred cCCCCCChHHHHHHHHHcCCEEEEEcCCCHHH----HHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCce
Q psy6866 661 YDPPRPAVPDAIDACHKAGIRVIMVTGDHPCT----AKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKEL 736 (961)
Q Consensus 661 ~D~lr~~~~~~I~~l~~agi~v~m~TGD~~~t----a~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 736 (961)
++.+.|++.+.++.|+++|++++++||.+... ...+...- .....+.......
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~-----------------------~~~~~~~~~~~~~ 90 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTR-----------------------KWVEDIAGVPLVM 90 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHH-----------------------HHHHHTTCCCCSE
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHh-----------------------hhhhhcCCCcEEE
Confidence 57889999999999999999999999986321 11111100 0000000000001
Q ss_pred EEe------ecCHHHHHHHHHHHhhc-CCEEEEEcCCCCCHhhhhhCCee
Q psy6866 737 VFA------RTSPLQKLRIVELYQSL-DEIVAVTGDGVNDAPALKKADIG 779 (961)
Q Consensus 737 v~a------r~~p~~K~~iv~~l~~~-g~~V~~vGDG~ND~~al~~AdvG 779 (961)
.+. |..+.-|..+.+.+... .++++|+||...|+.|.+++++=
T Consensus 91 ~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 91 QCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp EEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred eecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 111 23346677777776554 45678899999999999998875
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=93.18 E-value=0.12 Score=46.18 Aligned_cols=105 Identities=19% Similarity=0.266 Sum_probs=63.8
Q ss_pred ChhHHHHHHhhcccccchhhHhhcCCeEEEecCCCCCeeEEEEEEcCCCeEEEEEeCChHHHHHHhhcccccCCcccccC
Q psy6866 521 DATEVGILHFIQPRIKSIQDVRNTFPKVTEVPFNSLNKFHLTVHFSPLNKYFLLMKGAPEVIMERCTTMMAESDKEAFLT 600 (961)
Q Consensus 521 ~~~e~all~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~~~v~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~~~~~~l~ 600 (961)
+|...|++++++..+..... .........+||....+...+.. +| ..+..|++..+.+..... +. .++
T Consensus 31 HPlakAIv~~Ak~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~~~~~~~~~~----g~--~~~ 98 (136)
T d2a29a1 31 TPEGRSIVILAKQRFNLRER-DVQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEAN----GG--HFP 98 (136)
T ss_dssp SHHHHHHHHHHHHHHCCCCC-CTTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHHHHHHHHHHH----TC--CCC
T ss_pred chHHHHHHHHHHHhcCCCcc-ccccccccccccccccceEEEEE---CC--EEEEecHHHHHHHHHHHc----CC--CCc
Confidence 35556999998754322110 11223344566655544322222 22 356679998876654321 11 122
Q ss_pred HHHHHHHHHHHHHHHHhcCceeeEeeeecCCCCCCCCccCCCCCCCCCCCCceEEeeeeecCCCC
Q psy6866 601 AEKKYELEDKIKLFASKGERVLAFADLHLGQNNFPVNFKFSTDPMNFPSSGFRLIGLISLYDPPR 665 (961)
Q Consensus 601 ~~~~~~~~~~~~~~a~~G~rvl~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 665 (961)
..+.+.++.+..+|..++.+| .|-+++|++++.|++|
T Consensus 99 ----~~~~~~~~~~~~~G~Tvv~Va------------------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 99 ----TDVDQKVDQVARQGATPLVVV------------------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp ----HHHHHHHHHHHHTTSEEEEEE------------------------ETTEEEEEEEEEESSC
T ss_pred ----HHHHHHHHHHHHCCCeEEEEE------------------------ECCEEEEEEEEEeecC
Confidence 345677888999999999988 3448999999999987
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.46 E-value=0.021 Score=54.99 Aligned_cols=85 Identities=25% Similarity=0.366 Sum_probs=61.3
Q ss_pred CCCChHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEe
Q psy6866 664 PRPAVPDAIDACHKAGIRVIMVTGDH----PCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFA 739 (961)
Q Consensus 664 lr~~~~~~I~~l~~agi~v~m~TGD~----~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~a 739 (961)
+.|++.+.++.+++.|++|+.+||+. ..|+.++.+.+|+...... .++|.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~--------------------------~vll~ 140 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN--------------------------PVIFA 140 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC--------------------------CCEEC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc--------------------------ceEee
Confidence 46789999999999999999999985 3477777777898543221 12343
Q ss_pred ecCH--HHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe
Q psy6866 740 RTSP--LQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI 778 (961)
Q Consensus 740 r~~p--~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv 778 (961)
+-.+ ..|...|+ + -.+++++||..+|..+-+.|++
T Consensus 141 ~~~~~K~~rr~~Ik---~-y~I~l~~GD~l~Df~aA~eagi 177 (209)
T d2b82a1 141 GDKPGQNTKSQWLQ---D-KNIRIFYGDSDNDITAARDVGA 177 (209)
T ss_dssp CCCTTCCCSHHHHH---H-TTEEEEEESSHHHHHHHHHTTC
T ss_pred CCCCCchHHHHHHH---H-cCeEEEecCCHHHHhHHHHcCC
Confidence 3222 23555543 3 3588999999999999888874
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.43 E-value=0.14 Score=50.87 Aligned_cols=45 Identities=7% Similarity=0.056 Sum_probs=32.3
Q ss_pred ecCCCCCChHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCCC
Q psy6866 660 LYDPPRPAVPDAIDACHKAGIRVIMVTGDH---PCTAKAIAIKCHILS 704 (961)
Q Consensus 660 ~~D~lr~~~~~~I~~l~~agi~v~m~TGD~---~~ta~~ia~~~gi~~ 704 (961)
-.+.+=+++.++|+.|+++|++++++|+.. .......-+++|+.-
T Consensus 16 ~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 16 HDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp ETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred ECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 344444789999999999999999998544 444444445677643
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.26 E-value=0.16 Score=48.73 Aligned_cols=123 Identities=12% Similarity=0.121 Sum_probs=82.5
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+.+++.++++.+++.|+++.++|+-.........+..++...- ..++...+. -..+-.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f---d~~~~s~~~------------------~~~KP~ 151 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF---DHLLSVDPV------------------QVYKPD 151 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC---SEEEESGGG------------------TCCTTS
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc---cceeeeeee------------------eccccH
Confidence 45688999999999999999999999999999888888875421 122222221 112334
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCeeEeecC---CccHhhhhccceEeecCCchHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADIGIAMGI---TGSEVSKQTADMILMDDNFASIVL 808 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~AdvGIamg~---~g~~~a~~aad~vl~~~~~~~i~~ 808 (961)
|+-=..+++.+.-.-+.++||||..+|+.+=++|++-.+.-. ...+.....+|+++. ++..+.+
T Consensus 152 p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 152 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred HHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 444445555555445578899999999999999997755321 122223445788774 5666653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.80 E-value=0.2 Score=49.80 Aligned_cols=41 Identities=7% Similarity=0.035 Sum_probs=31.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC---CHHHHHHHHHHcCCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD---HPCTAKAIAIKCHIL 703 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD---~~~ta~~ia~~~gi~ 703 (961)
++=+++.++++.|+++|++++++|+. .........+++|+.
T Consensus 23 ~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 23 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred ccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 33479999999999999999999954 444455555667774
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=91.62 E-value=0.16 Score=48.94 Aligned_cols=25 Identities=40% Similarity=0.590 Sum_probs=23.0
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTG 687 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TG 687 (961)
.+-|++.++|+.|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 4678999999999999999999995
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=90.37 E-value=0.17 Score=48.77 Aligned_cols=111 Identities=9% Similarity=0.089 Sum_probs=69.8
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
++-|++.+.++.|++.|+++.++|+... +....+..|+...- ..++.+.+. ...+-.
T Consensus 91 ~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f---~~i~~~~~~------------------~~~KP~ 147 (221)
T d1o08a_ 91 DVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF---DAIADPAEV------------------AASKPA 147 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC---SEECCTTTS------------------SSCTTS
T ss_pred cccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc---ccccccccc------------------cccccC
Confidence 5678999999999999999999999765 46677888885421 112222211 112333
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe-eEeecCCccHhhhhccceEee
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI-GIAMGITGSEVSKQTADMILM 799 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv-GIamg~~g~~~a~~aad~vl~ 799 (961)
|+-=....+.+.-..+.++|+||..+|+.+-+.|++ .|.++ .+ .....++.++.
T Consensus 148 ~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVP 202 (221)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEES
T ss_pred hHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcC
Confidence 333333444444344568899999999999999987 34333 22 22334555543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=89.70 E-value=0.18 Score=50.07 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=38.5
Q ss_pred ecCHHHHHHHHHHHhhcCCEEEEEcCCCC-CHhhhhhCCe-eEeec--CCccHhhhhc---cceEeec
Q psy6866 740 RTSPLQKLRIVELYQSLDEIVAVTGDGVN-DAPALKKADI-GIAMG--ITGSEVSKQT---ADMILMD 800 (961)
Q Consensus 740 r~~p~~K~~iv~~l~~~g~~V~~vGDG~N-D~~al~~Adv-GIamg--~~g~~~a~~a---ad~vl~~ 800 (961)
+-+|+--..+.+.+.-..+.++||||..+ |+.+-++|++ +|.+. ....+...+. .|+++.+
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 33455445555666555567999999976 9999999998 66553 2222222333 3888753
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.50 E-value=0.35 Score=46.17 Aligned_cols=104 Identities=12% Similarity=0.116 Sum_probs=65.6
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD----HPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.+.+++.+.++.|+++|+++.++|+- ............|+...- ..++.+.+. -.
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f---d~i~~s~~~------------------~~ 155 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF---DFLIESCQV------------------GM 155 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC---SEEEEHHHH------------------SC
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh---ceeeehhhc------------------cC
Confidence 46789999999999999999999963 233334444455553211 112222211 11
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe-eEeecCCccH
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI-GIAMGITGSE 788 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv-GIamg~~g~~ 788 (961)
..-.|+--...++.++-.-+.+.||||..+|+.+-+.|++ +|-+. ++.+
T Consensus 156 ~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~ 205 (222)
T d1cr6a1 156 IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTAS 205 (222)
T ss_dssp CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSH
T ss_pred CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-Ccch
Confidence 2345555566666666555678889999999999999987 44333 3443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=88.03 E-value=0.29 Score=46.97 Aligned_cols=125 Identities=12% Similarity=0.108 Sum_probs=74.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEEeecC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTAKAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVFARTS 742 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ar~~ 742 (961)
.+.+++.+.+++|+ .+..++|+-....+..+-+++|+...-. ..+..+.+... -.++-.
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~----------------~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFA--PHIYSAKDLGA----------------DRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTT--TCEEEHHHHCT----------------TCCTTS
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccc--eeecccccccc----------------cccccC
Confidence 46778877777665 4567899999999999999999965321 11222211100 011223
Q ss_pred HHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe---eEeecCCcc----Hh-hhhccceEeecCCchHHHHHH
Q psy6866 743 PLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI---GIAMGITGS----EV-SKQTADMILMDDNFASIVLGI 810 (961)
Q Consensus 743 p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv---GIamg~~g~----~~-a~~aad~vl~~~~~~~i~~~i 810 (961)
|+-=....+.+.-..+.++||||+.+|+.+=+.|++ |++-|.... +. ...-||+++. ++..+..++
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ll 217 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 217 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 333344445554445678899999999999999996 343231110 11 1224899887 455555444
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=85.44 E-value=0.12 Score=47.65 Aligned_cols=26 Identities=27% Similarity=0.428 Sum_probs=23.4
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCC
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGD 688 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD 688 (961)
.+-|++.++++.|+++|++++++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45689999999999999999999964
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.86 E-value=0.59 Score=44.21 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=59.1
Q ss_pred CCCCChHHHHHHHHHcCCEEEEEcCCCHHHH----HHHHHHcCCCCCCCCCceeEechhhccCCHHHHHHHHHhcCceEE
Q psy6866 663 PPRPAVPDAIDACHKAGIRVIMVTGDHPCTA----KAIAIKCHILSETSSDDNVFTGTDLRKITDEELKDILETNKELVF 738 (961)
Q Consensus 663 ~lr~~~~~~I~~l~~agi~v~m~TGD~~~ta----~~ia~~~gi~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~v~ 738 (961)
.+.+++.+.++.|++.|+++.++|+...... ...-...++.... ..++.+.+. -.
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f---d~i~~s~~~------------------~~ 157 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF---DFLIESCQV------------------GM 157 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS---SEEEEHHHH------------------TC
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc---cEEEecccc------------------cc
Confidence 4678999999999999999999997543322 1122222221110 112222111 01
Q ss_pred eecCHHHHHHHHHHHhhcCCEEEEEcCCCCCHhhhhhCCe-eEeec
Q psy6866 739 ARTSPLQKLRIVELYQSLDEIVAVTGDGVNDAPALKKADI-GIAMG 783 (961)
Q Consensus 739 ar~~p~~K~~iv~~l~~~g~~V~~vGDG~ND~~al~~Adv-GIamg 783 (961)
.+-+|+-=..+++.+.-..+.++||||...|+.+-++|++ +|.+.
T Consensus 158 ~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 158 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred chhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 2234444345555555444567789999999999999998 55443
|