Psyllid ID: psy6902

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ
Secondary Structure (PSIPRED)
cccccccccccccEEccccccccccccccccccEEEEccccccccccccccccccccccEEEEcccccccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEcccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEEEccccccEEEEccccccccccc
Coil and Loop (DISEMBL)
ssacdpahvrpgcriqdnqcicgkgcypeykfiTQEECMTALkgkrqnacdtnpcyhggrctqtfqdrtgykcrcsgtgyygkkcq
Flexible Loop (DISEMBL)
ssacdpahvrpgcriqdnqcicGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYhggrctqtfqdrtgykcrcsgtgyygkkcq
Low Complexity Region (SEG)
SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ
Disordered region (IsUnstruct)
*********RPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYG****
Disordered Region (DISOPRED)
*SACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC*
Disordered Region (DISEMBL)
*********RPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ
Disordered Region (DISPRO)
***C*PAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	86	2.2.26 [Sep-21-2011]
P33450	5147	Cadherin-related tumor su	yes	N/A	0.906	0.015	0.274	5e-05
P70682	604	Prostaglandin G/H synthas	yes	N/A	0.418	0.059	0.5	8e-05
Q05769	604	Prostaglandin G/H synthas	yes	N/A	0.418	0.059	0.473	0.0002
Q0V8T5	1292	Contactin-associated prot	yes	N/A	0.430	0.028	0.475	0.0003
Q0V8T8	1292	Contactin-associated prot	no	N/A	0.430	0.028	0.475	0.0003
Q0V8T9	1304	Contactin-associated prot	no	N/A	0.430	0.028	0.475	0.0004

>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft PE=1 SV=3

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 44/113 (38%), Gaps = 35/113 (30%)

Query: 5    DPAHVRPGCRI--QDNQCIC-----GKGCYPEYKFITQEE-------------------- 37
            +P H +  CR    D QC+C     GK C  E   +   +                    
Sbjct: 4020 NPCHSQVQCRRLGSDFQCMCPANRDGKHCEKERSDVCYSKPCRNGGSCQRSPDGSSYFCL 4079

Query: 38   CMTALKGKR----QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
            C    +G +     ++C  NPC HGG C      + GYKC C+  G YG+ C+
Sbjct: 4080 CRPGFRGNQCESVSDSCRPNPCLHGGLCVSL---KPGYKCNCT-PGRYGRHCE 4128

Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.
Drosophila melanogaster (taxid: 7227)

>sp|P70682|PGH2_CAVPO Prostaglandin G/H synthase 2 OS=Cavia porcellus GN=PTGS2 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C     DR  YKC C+ TGYYG+ C
Sbjct: 19 NPCCSNPCQNRGECLSVGFDR--YKCDCTRTGYYGENC 54

Mediates the formation of prostaglandins from arachidonate. May have a role as a major mediator of inflammation and/or a role for prostanoid signaling in activity-dependent plasticity.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q05769|PGH2_MOUSE Prostaglandin G/H synthase 2 OS=Mus musculus GN=Ptgs2 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 19 NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 54

Mediates the formation of prostaglandins from arachidonate. May have a role as a major mediator of inflammation and/or a role for prostanoid signaling in activity-dependent plasticity.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q0V8T5|CTP5B_RAT Contactin-associated protein like 5-2 OS=Rattus norvegicus GN=Cntnap5b PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 47  QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           ++ C  N C HGG CTQT+   T + C CS TGY G  C 
Sbjct: 547 KDRCLPNYCEHGGHCTQTW---TSFYCNCSDTGYTGATCH 583

May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication.

Rattus norvegicus (taxid: 10116)

>sp|Q0V8T8|CTP5B_MOUSE Contactin-associated protein like 5-2 OS=Mus musculus GN=Cntnap5b PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 47  QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           ++ C  N C HGG CTQT+   T + C CS TGY G  C 
Sbjct: 547 KDRCFPNYCEHGGHCTQTW---TNFYCNCSNTGYTGATCH 583

May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication.

Mus musculus (taxid: 10090)

>sp|Q0V8T9|CTP5A_MOUSE Contactin-associated protein like 5-1 OS=Mus musculus GN=Cntnap5a PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 47  QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           ++ C  N C HGG C QT+   T + C CSGTGY G  C 
Sbjct: 547 KDRCLPNYCEHGGHCDQTW---TTFYCNCSGTGYTGATCH 583

May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
350536433	124	uncharacterized protein LOC100569781 pre	0.953	0.661	0.564	2e-17
270004576	122	hypothetical protein TcasGA2_TC003939 [T	0.965	0.680	0.535	4e-17
242023903	132	conserved hypothetical protein [Pediculu	0.883	0.575	0.506	6e-15
321472910	129	hypothetical protein DAPPUDRAFT_239483 [	0.976	0.651	0.435	3e-14
157107392	128	hypothetical protein AaeL_AAEL014852 [Ae	0.988	0.664	0.465	2e-13
170038772	129	conserved hypothetical protein [Culex qu	0.988	0.658	0.441	2e-13
340716357	127	PREDICTED: hypothetical protein LOC10064	0.976	0.661	0.5	3e-13
380018119	128	PREDICTED: uncharacterized protein LOC10	0.976	0.656	0.488	3e-13
328789000	128	PREDICTED: hypothetical protein LOC10057	0.976	0.656	0.488	3e-13
158293679	116	AGAP004936-PA [Anopheles gambiae str. PE	0.976	0.724	0.447	3e-13

>gi|350536433|ref|NP_001233055.1| uncharacterized protein LOC100569781 precursor [Acyrthosiphon pisum] gi|239792577|dbj|BAH72616.1| ACYPI31162 [Acyrthosiphon pisum]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 3/85 (3%)

Query: 2   SACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRC 61
            +CD +  R GCRIQ+ QC+CGKGCY EY++   EEC  ALKG+R + C   PC H G C
Sbjct: 22  ESCDQS--RQGCRIQEGQCLCGKGCYSEYRYSNYEECYKALKGRRFDFCAQGPCNHNGVC 79

Query: 62  TQTFQDRTGYKCRCSGTGYYGKKCQ 86
            QT Q+  GYKCRC+GTGYYG +C+
Sbjct: 80  VQTSQE-PGYKCRCAGTGYYGARCE 103

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004576|gb|EFA01024.1| hypothetical protein TcasGA2_TC003939 [Tribolium castaneum]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 2  SACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRC 61
          +ACD    + GCRIQ+  C CG GC  EY++ T  EC  AL+GKR++ C+ NPC HGG C
Sbjct: 17 TACDMDQTKQGCRIQNKACSCGFGCISEYRYDTMAECQNALRGKRRDICNPNPCLHGGSC 76

Query: 62 TQTFQDRTGYKCRCSGTGYYGKKC 85
           Q  Q R  YKCRC GTGY+G +C
Sbjct: 77 IQISQ-RPKYKCRCEGTGYFGLRC 99

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242023903|ref|XP_002432370.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517793|gb|EEB19632.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 85.1 bits (209), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 57/77 (74%), Gaps = 1/77 (1%)

Query: 10  RPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRT 69
           R GC+I++ QC+CG GCY EY++ ++ EC  A+KG+  + C  NPC +GG C+QT  +  
Sbjct: 36  RRGCKIENGQCVCGTGCYYEYRYSSKSECYKAIKGREYDLCQRNPCRNGGTCSQTSHE-P 94

Query: 70  GYKCRCSGTGYYGKKCQ 86
           G+KCRC GTG+YG++CQ
Sbjct: 95  GFKCRCEGTGFYGQRCQ 111

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321472910|gb|EFX83879.1| hypothetical protein DAPPUDRAFT_239483 [Daphnia pulex]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 2   SACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRC 61
           + CD   +R GCRIQ+  C+CG GC  +Y++  + EC +AL+G+ Q+ C + PC  G  C
Sbjct: 24  ATCDSNRLRQGCRIQEGSCLCGTGCDTDYRYSNKRECESALRGRSQDPCSSRPCNRGS-C 82

Query: 62  TQTFQDRTGYKCRCSGTGYYGKKCQ 86
            Q     TGY C CSGT Y+G +C+
Sbjct: 83  LQILNAPTGYNCLCSGTNYFGDRCE 107

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107392|ref|XP_001649758.1| hypothetical protein AaeL_AAEL014852 [Aedes aegypti] gi|94469360|gb|ABF18529.1| neurexin domain-containing protein [Aedes aegypti] gi|108868686|gb|EAT32911.1| AAEL014852-PA [Aedes aegypti]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 1   SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGR 60
           S AC+    + GCRI + QC C  GC  E+++ T++EC  ALKG+  + C   PC +GG 
Sbjct: 22  SRACELDQTQHGCRIDNGQCSCAYGCKSEFRYATRKECQDALKGRSNDICSRQPCQNGGS 81

Query: 61  CTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           CTQ       YKCRC GTGY+G +CQ
Sbjct: 82  CTQV-STMPQYKCRCEGTGYWGNRCQ 106

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170038772|ref|XP_001847222.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167882468|gb|EDS45851.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 1   SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGR 60
           + AC+    + GCRI + QC C  GC  E+++ T++EC  ALKG+  + C   PC +GG 
Sbjct: 23  THACELDQTQHGCRIDNGQCTCAFGCKSEFRYATRKECQDALKGRSNDVCSRQPCMNGGH 82

Query: 61  CTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           C+Q    +  YKCRC GTGY+G++CQ
Sbjct: 83  CSQVSTVQQ-YKCRCEGTGYWGQRCQ 107

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716357|ref|XP_003396665.1| PREDICTED: hypothetical protein LOC100647218 [Bombus terrestris] gi|350406259|ref|XP_003487711.1| PREDICTED: hypothetical protein LOC100747598 [Bombus impatiens]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 1   SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNAC-DTNPCYHGG 59
           S ACD   ++ GCRI + QC CG GC  EY++ T E+C  AL+G+R + C  + PC +GG
Sbjct: 20  SKACDLDQMQYGCRIYNAQCRCGYGCSSEYRYNTNEDCKEALRGRRSDICYRSKPCLNGG 79

Query: 60  RCTQTFQDRTGYKCRCSGTGYYGKKC 85
            C Q   D  G+KCRC GTGYYG  C
Sbjct: 80  SCLQISSD-PGFKCRCEGTGYYGPHC 104

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380018119|ref|XP_003692983.1| PREDICTED: uncharacterized protein LOC100863330 [Apis florea]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 1   SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNAC-DTNPCYHGG 59
           ++ACD   ++ GCRI + QC CG GC  EY++ + E+C  AL+GKR + C  T PC +GG
Sbjct: 21  TNACDLDQMQYGCRIYNAQCRCGYGCSSEYRYNSNEDCKEALRGKRSDICYRTKPCLNGG 80

Query: 60  RCTQTFQDRTGYKCRCSGTGYYGKKC 85
            C Q      G+KCRC GTGYYG  C
Sbjct: 81  SCLQ-ISSEPGFKCRCEGTGYYGSHC 105

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328789000|ref|XP_003251214.1| PREDICTED: hypothetical protein LOC100578232 [Apis mellifera]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 2/86 (2%)

Query: 1   SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNAC-DTNPCYHGG 59
           ++ACD   ++ GCRI + QC CG GC  EY++ + E+C  AL+GKR + C  T PC +GG
Sbjct: 21  TNACDLDQMQYGCRIYNAQCRCGYGCSSEYRYNSNEDCKEALRGKRSDICYRTKPCLNGG 80

Query: 60  RCTQTFQDRTGYKCRCSGTGYYGKKC 85
            C Q      G+KCRC GTGYYG  C
Sbjct: 81  SCLQ-ISSEPGFKCRCEGTGYYGSHC 105

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293679|ref|XP_001231040.2| AGAP004936-PA [Anopheles gambiae str. PEST] gi|157016563|gb|EAU76687.2| AGAP004936-PA [Anopheles gambiae str. PEST]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 1  SSACDPAHVRPGCRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGR 60
          + +CD    + GCRI + QC C  GC  E+++ T++EC  ALKG+  + C+  PC +GG 
Sbjct: 10 TQSCDLDQTQQGCRIDNGQCTCAFGCKSEFRYATKKECQDALKGRSSDICNRQPCMNGGT 69

Query: 61 CTQTFQDRTGYKCRCSGTGYYGKKC 85
          CTQ       YKCRC GTGY+G +C
Sbjct: 70 CTQ-VTTMPQYKCRCEGTGYWGNRC 93

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
UNIPROTKB|E1B9I8	603	DLL3 "Uncharacterized protein"	0.383	0.054	0.405	3.7e-08
UNIPROTKB|Q9NYJ7	618	DLL3 "Delta-like protein 3" [H	0.383	0.053	0.432	1.6e-07
UNIPROTKB|I3LI50	598	DLL3 "Uncharacterized protein"	0.383	0.055	0.405	3.1e-07
UNIPROTKB|F1MUJ4	720	PAMR1 "Inactive serine proteas	0.395	0.047	0.487	7.4e-07
UNIPROTKB|Q5E9P5	720	PAMR1 "Inactive serine proteas	0.395	0.047	0.487	7.4e-07
MGI|MGI:1096877	592	Dll3 "delta-like 3 (Drosophila	0.441	0.064	0.404	7.7e-07
UNIPROTKB|E2RMW9	680	PAMR1 "Uncharacterized protein	0.395	0.05	0.461	8.2e-07
UNIPROTKB|E9PQ70	675	PAMR1 "Inactive serine proteas	0.395	0.050	0.435	1.7e-06
UNIPROTKB|E9PIV1	680	PAMR1 "Inactive serine proteas	0.395	0.05	0.435	1.7e-06
UNIPROTKB|Q6UXH9	720	PAMR1 "Inactive serine proteas	0.395	0.047	0.435	1.9e-06

UNIPROTKB|E1B9I8 DLL3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 90 (36.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query:    50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
             CD NPC +GG C++T      ++C C   G+YG +C+
Sbjct:   278 CDGNPCANGGSCSETLGS---FECTCP-RGFYGLRCE 310

GO:0050768 "negative regulation of neurogenesis" evidence=IEA

GO:0048339 "paraxial mesoderm development" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IEA

GO:0001756 "somitogenesis" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

UNIPROTKB|Q9NYJ7 DLL3 "Delta-like protein 3" [Homo sapiens (taxid:9606)]

 Score = 90 (36.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query:    50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
             CD NPC +GG C++T   R+ ++C C   G+YG +C+
Sbjct:   278 CDGNPCANGGSCSET--PRS-FECTCP-RGFYGLRCE 310

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0001756 "somitogenesis" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IEA

GO:0048339 "paraxial mesoderm development" evidence=IEA

GO:0050768 "negative regulation of neurogenesis" evidence=IEA

GO:0001501 "skeletal system development" evidence=IMP

GO:0005112 "Notch binding" evidence=NAS

GO:0016021 "integral to membrane" evidence=NAS

UNIPROTKB|I3LI50 DLL3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 90 (36.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query:    50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
             CD NPC +GG C++T      ++C C   G+YG +C+
Sbjct:   279 CDGNPCANGGSCSETLGS---FECTCP-RGFYGLRCE 311

GO:0016021 "integral to membrane" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

UNIPROTKB|F1MUJ4 PAMR1 "Inactive serine protease PAMR1" [Bos taurus (taxid:9913)]

 Score = 97 (39.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
 Identities = 19/39 (48%), Positives = 23/39 (58%)

Query:    49 ACDTNPCYHGGRCTQTFQDRTG-YKCRCSGTGYYGKKCQ 86
             AC ++PC+H G C     D TG YKC C   GY GK C+
Sbjct:   238 ACSSSPCFHDGTC---LLDSTGSYKCACLA-GYTGKHCE 272

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|Q5E9P5 PAMR1 "Inactive serine protease PAMR1" [Bos taurus (taxid:9913)]

 Score = 97 (39.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
 Identities = 19/39 (48%), Positives = 23/39 (58%)

Query:    49 ACDTNPCYHGGRCTQTFQDRTG-YKCRCSGTGYYGKKCQ 86
             AC ++PC+H G C     D TG YKC C   GY GK C+
Sbjct:   238 ACSSSPCFHDGTC---LLDSTGSYKCACLA-GYTGKHCE 272

GO:0005576 "extracellular region" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

MGI|MGI:1096877 Dll3 "delta-like 3 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 90 (36.7 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query:    45 KRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
             +R + C + PC HGGRC   F   +G  C C+  GY G +C+
Sbjct:   426 ERADPCASRPCAHGGRCYAHF---SGLVCACA-PGYMGVRCE 463

GO:0001501 "skeletal system development" evidence=ISO;IMP

GO:0001701 "in utero embryonic development" evidence=NAS

GO:0001709 "cell fate determination" evidence=NAS

GO:0001756 "somitogenesis" evidence=IMP;IDA

GO:0005112 "Notch binding" evidence=ISO;NAS

GO:0005515 "protein binding" evidence=IPI

GO:0007219 "Notch signaling pathway" evidence=NAS

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IMP

GO:0007399 "nervous system development" evidence=NAS

GO:0009888 "tissue development" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO

GO:0048339 "paraxial mesoderm development" evidence=IMP

GO:0048712 "negative regulation of astrocyte differentiation" evidence=ISO

GO:0050768 "negative regulation of neurogenesis" evidence=IDA

GO:0050769 "positive regulation of neurogenesis" evidence=ISO

UNIPROTKB|E2RMW9 PAMR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 96 (38.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
 Identities = 18/39 (46%), Positives = 24/39 (61%)

Query:    49 ACDTNPCYHGGRCTQTFQDRTG-YKCRCSGTGYYGKKCQ 86
             AC ++PC+H G C     D+TG YKC C   GY G+ C+
Sbjct:   198 ACSSSPCFHDGTC---LLDKTGSYKCACLA-GYTGQHCE 232

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|E9PQ70 PAMR1 "Inactive serine protease PAMR1" [Homo sapiens (taxid:9606)]

 Score = 94 (38.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query:    49 ACDTNPCYHGGRCTQTFQDRTG-YKCRCSGTGYYGKKCQ 86
             AC ++PC+H G C     D+ G YKC C   GY G++C+
Sbjct:   198 ACSSSPCFHDGTCVL---DKAGSYKCACLA-GYTGQRCE 232

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|E9PIV1 PAMR1 "Inactive serine protease PAMR1" [Homo sapiens (taxid:9606)]

 Score = 94 (38.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query:    49 ACDTNPCYHGGRCTQTFQDRTG-YKCRCSGTGYYGKKCQ 86
             AC ++PC+H G C     D+ G YKC C   GY G++C+
Sbjct:   198 ACSSSPCFHDGTCVL---DKAGSYKCACLA-GYTGQRCE 232

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|Q6UXH9 PAMR1 "Inactive serine protease PAMR1" [Homo sapiens (taxid:9606)]

 Score = 94 (38.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query:    49 ACDTNPCYHGGRCTQTFQDRTG-YKCRCSGTGYYGKKCQ 86
             AC ++PC+H G C     D+ G YKC C   GY G++C+
Sbjct:   238 ACSSSPCFHDGTCVL---DKAGSYKCACLA-GYTGQRCE 272

GO:0003824 "catalytic activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
KOG1219|consensus	4289		99.5
KOG1219|consensus	4289		99.07
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	98.9
KOG4289|consensus	2531		98.78
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	98.64
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	98.47
KOG4289|consensus	2531		98.2
cd00053	36	EGF Epidermal growth factor domain, found in epide	98.14
smart00181	35	EGF Epidermal growth factor-like domain.	98.05
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.85
KOG1214|consensus	1289		97.61
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.27
KOG3514|consensus	1591		97.26
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	97.12
KOG3516|consensus	1306		97.07
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	96.62
KOG1217|consensus	487		96.58
KOG3516|consensus	1306		96.35
PHA02887	126	EGF-like protein; Provisional	96.26
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	96.09
KOG1225|consensus	525		95.87
KOG1217|consensus	487		95.72
KOG1225|consensus	525		95.0
PF12662	24	cEGF: Complement Clr-like EGF-like	94.09
KOG1836|consensus	1705		91.42
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	89.62
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	89.41
smart00051	63	DSL delta serrate ligand.	89.38
KOG1214|consensus	1289		89.01
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	85.37
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	84.99
KOG1226|consensus	783		82.23
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	81.94

>KOG1219|consensus

Probab=99.50  E-value=1.6e-14  Score=115.87  Aligned_cols=69  Identities=32%  Similarity=0.925  Sum_probs=62.3

Q ss_pred             CCCCCCCCCCC--CeeC---CccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCC
Q psy6902           2 SACDPAHVRPG--CRIQ---DNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCS   76 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~~---~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~   76 (86)
                      .+|..+||+||  |...   .|.|.|++.       |+|.+||.+     +.+|.++||++||+|+...   ++|.|.|+
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsq-------ysG~~CEi~-----~epC~snPC~~GgtCip~~---n~f~CnC~ 3929 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQ-------YSGNHCEID-----LEPCASNPCLTGGTCIPFY---NGFLCNCP 3929 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCccc-------ccCcccccc-----cccccCCCCCCCCEEEecC---CCeeEeCC
Confidence            47999999999  8763   399999999       489999999     8999999999999999875   49999999


Q ss_pred             CCCcCCCCCC
Q psy6902          77 GTGYYGKKCQ   86 (86)
Q Consensus        77 ~~g~~G~~Ce   86 (86)
                       .||+|++||
T Consensus      3930 -~gyTG~~Ce 3938 (4289)
T KOG1219|consen 3930 -NGYTGKRCE 3938 (4289)
T ss_pred             -CCccCceee
Confidence             899999997

>KOG1219|consensus

Probab=99.07  E-value=1.3e-10  Score=94.32  Aligned_cols=70  Identities=27%  Similarity=0.688  Sum_probs=60.8

Q ss_pred             CCCCCCCCCCC--CeeC--CccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCC
Q psy6902           2 SACDPAHVRPG--CRIQ--DNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSG   77 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~~--~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~   77 (86)
                      .+|.++||++|  |...  .|.|.|+.+       |||.+|+..-    +++|..++|.+||.|++..   +.|.|.|. 
T Consensus      3904 epC~snPC~~GgtCip~~n~f~CnC~~g-------yTG~~Ce~~G----i~eCs~n~C~~gg~C~n~~---gsf~CncT- 3968 (4289)
T KOG1219|consen 3904 EPCASNPCLTGGTCIPFYNGFLCNCPNG-------YTGKRCEARG----ISECSKNVCGTGGQCINIP---GSFHCNCT- 3968 (4289)
T ss_pred             ccccCCCCCCCCEEEecCCCeeEeCCCC-------ccCceeeccc----ccccccccccCCceeeccC---CceEeccC-
Confidence            36999999999  8763  499999999       4999998641    8999999999999999985   48999999 


Q ss_pred             CCcCCCCCC
Q psy6902          78 TGYYGKKCQ   86 (86)
Q Consensus        78 ~g~~G~~Ce   86 (86)
                      +||.|+.|+
T Consensus      3969 ~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3969 PGILGRTCC 3977 (4289)
T ss_pred             hhHhcccCc
Confidence            999999873

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=98.90  E-value=9.7e-10  Score=52.41  Aligned_cols=32  Identities=47%  Similarity=1.216  Sum_probs=27.9

Q ss_pred             CCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCC
Q psy6902          50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKK   84 (86)
Q Consensus        50 C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~   84 (86)
                      |.++||+|+|+|++..  .+.|+|.|+ +||+|++
T Consensus         1 C~~~~C~n~g~C~~~~--~~~y~C~C~-~G~~G~~   32 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLP--GGGYTCECP-PGYTGKR   32 (32)
T ss_dssp             TTTTSSTTTEEEEEES--TSEEEEEEB-TTEESTT
T ss_pred             CCCCcCCCCeEEEeCC--CCCEEeECC-CCCccCC
Confidence            6788999999999885  258999999 8999975

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG4289|consensus

Probab=98.78  E-value=4e-09  Score=83.61  Aligned_cols=53  Identities=36%  Similarity=0.950  Sum_probs=48.6

Q ss_pred             ccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          18 NQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        18 ~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +.|.||+|       |||..|++.     +|.|.++||.|+|+|....   ++|+|.|. +||+|.+||
T Consensus      1222 lrCrCPpG-------FTgd~CeTe-----iDlCYs~pC~nng~C~srE---ggYtCeCr-pg~tGehCE 1274 (2531)
T KOG4289|consen 1222 LRCRCPPG-------FTGDYCETE-----IDLCYSGPCGNNGRCRSRE---GGYTCECR-PGFTGEHCE 1274 (2531)
T ss_pred             eeEeCCCC-------CCcccccch-----hHhhhcCCCCCCCceEEec---CceeEEec-CCcccccee
Confidence            78999999       388899998     9999999999999999874   59999999 999999997

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=98.64  E-value=6.8e-08  Score=46.97  Aligned_cols=36  Identities=42%  Similarity=1.227  Sum_probs=31.7

Q ss_pred             cccCCC-CCCcCCceEecCCCCCCCeEEeCCCCCcC-CCCCC
Q psy6902          47 QNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYY-GKKCQ   86 (86)
Q Consensus        47 ~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~-G~~Ce   86 (86)
                      +++|.. +||.++++|++..   ++|.|.|+ +||+ |..|+
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~---g~~~C~C~-~g~~~g~~C~   39 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTV---GSYRCECP-PGYTDGRNCE   39 (39)
T ss_pred             cccCcCCCCcCCCCEeECCC---CCeEeECC-CCCccCCcCC
Confidence            678888 8999999999874   48999999 8999 99886

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=98.47  E-value=3.6e-07  Score=43.80  Aligned_cols=36  Identities=42%  Similarity=1.221  Sum_probs=31.2

Q ss_pred             cccCCC-CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +++|.. .||.+++.|++..   ++|.|.|+ .||.|+.|+
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~---~~~~C~C~-~g~~g~~C~   38 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTV---GSYRCSCP-PGYTGRNCE   38 (38)
T ss_pred             cccCCCCCCcCCCCEeECCC---CCeEeECC-CCCcCCcCC
Confidence            578887 7999999999875   48999999 899999885

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>KOG4289|consensus

Probab=98.20  E-value=1.5e-06  Score=69.61  Aligned_cols=72  Identities=26%  Similarity=0.721  Sum_probs=55.6

Q ss_pred             CCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCC
Q psy6902           3 ACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGT   78 (86)
Q Consensus         3 ~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~   78 (86)
                      .|-+.||.++  |..  ..|.|.|.++    |   +|.+||...   +.-.|.+.-|+|||+|++...  ++|.|+|+..
T Consensus      1241 lCYs~pC~nng~C~srEggYtCeCrpg----~---tGehCEvs~---~agrCvpGvC~nggtC~~~~n--ggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1241 LCYSGPCGNNGRCRSREGGYTCECRPG----F---TGEHCEVSA---RAGRCVPGVCKNGGTCVNLLN--GGFCCHCPYG 1308 (2531)
T ss_pred             hhhcCCCCCCCceEEecCceeEEecCC----c---cccceeeec---ccCccccceecCCCEEeecCC--CceeccCCCc
Confidence            4667888876  865  4499999888    4   889998761   123599999999999998863  6899999944


Q ss_pred             CcCCCCCC
Q psy6902          79 GYYGKKCQ   86 (86)
Q Consensus        79 g~~G~~Ce   86 (86)
                      .|.+++||
T Consensus      1309 e~e~prC~ 1316 (2531)
T KOG4289|consen 1309 EFEDPRCE 1316 (2531)
T ss_pred             ccCCCceE
Confidence            57788775

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=98.14  E-value=5.9e-06  Score=38.81  Aligned_cols=33  Identities=45%  Similarity=1.241  Sum_probs=27.9

Q ss_pred             CC-CCCCcCCceEecCCCCCCCeEEeCCCCCcCCC-CCC
Q psy6902          50 CD-TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGK-KCQ   86 (86)
Q Consensus        50 C~-~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~-~Ce   86 (86)
                      |. .++|.+++.|++..   ++|.|.|+ .||.|. .|+
T Consensus         2 C~~~~~C~~~~~C~~~~---~~~~C~C~-~g~~g~~~C~   36 (36)
T cd00053           2 CAASNPCSNGGTCVNTP---GSYRCVCP-PGYTGDRSCE   36 (36)
T ss_pred             CCCCCCCCCCCEEecCC---CCeEeECC-CCCcccCCcC
Confidence            44 67899999999875   48999999 899998 775

>smart00181 EGF Epidermal growth factor-like domain

Probab=98.05  E-value=1.1e-05  Score=38.26  Aligned_cols=32  Identities=44%  Similarity=1.216  Sum_probs=27.0

Q ss_pred             CCC-CCCcCCceEecCCCCCCCeEEeCCCCCcCC-CCCC
Q psy6902          50 CDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYYG-KKCQ   86 (86)
Q Consensus        50 C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G-~~Ce   86 (86)
                      |.. ++|.++ .|++..   ++|.|.|+ .||.| +.|+
T Consensus         2 C~~~~~C~~~-~C~~~~---~~~~C~C~-~g~~g~~~C~   35 (35)
T smart00181        2 CASGGPCSNG-TCINTP---GSYTCSCP-PGYTGDKRCE   35 (35)
T ss_pred             CCCcCCCCCC-EEECCC---CCeEeECC-CCCccCCccC
Confidence            556 689998 999874   48999999 89999 8875

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.85  E-value=1.5e-05  Score=39.81  Aligned_cols=31  Identities=32%  Similarity=0.854  Sum_probs=26.7

Q ss_pred             cccCCCC--CCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTN--PCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~--PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||||...  +|..++.|+++.   ++|.|.|+ +||.
T Consensus         2 idEC~~~~~~C~~~~~C~N~~---Gsy~C~C~-~Gy~   34 (42)
T PF07645_consen    2 IDECAEGPHNCPENGTCVNTE---GSYSCSCP-PGYE   34 (42)
T ss_dssp             SSTTTTTSSSSSTTSEEEEET---TEEEEEES-TTEE
T ss_pred             ccccCCCCCcCCCCCEEEcCC---CCEEeeCC-CCcE
Confidence            7888764  598899999985   59999999 8997

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1214|consensus

Probab=97.61  E-value=8.7e-05  Score=57.46  Aligned_cols=51  Identities=29%  Similarity=0.801  Sum_probs=40.9

Q ss_pred             ccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCC
Q psy6902          18 NQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGK   83 (86)
Q Consensus        18 ~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~   83 (86)
                      |.|.|.+|+.+     .|..|.      ++|+|.++-|...++|.+..   ++|.|.|. +||.|.
T Consensus       809 y~C~CLPGfsG-----DG~~c~------dvDeC~psrChp~A~Cyntp---gsfsC~C~-pGy~GD  859 (1289)
T KOG1214|consen  809 YSCACLPGFSG-----DGHQCT------DVDECSPSRCHPAATCYNTP---GSFSCRCQ-PGYYGD  859 (1289)
T ss_pred             EEEeecCCccC-----Cccccc------cccccCccccCCCceEecCC---Ccceeecc-cCccCC
Confidence            88888888544     223443      37999999999999999985   59999999 999974

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.27  E-value=0.0006  Score=32.28  Aligned_cols=27  Identities=37%  Similarity=0.942  Sum_probs=23.1

Q ss_pred             CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCC
Q psy6902          53 NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC   85 (86)
Q Consensus        53 ~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~C   85 (86)
                      ..|.+.|+|+..     ..+|.|. +||+|+.|
T Consensus         6 ~~C~~~G~C~~~-----~g~C~C~-~g~~G~~C   32 (32)
T PF07974_consen    6 NICSGHGTCVSP-----CGRCVCD-SGYTGPDC   32 (32)
T ss_pred             CccCCCCEEeCC-----CCEEECC-CCCcCCCC
Confidence            469999999975     4689999 89999987

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG3514|consensus

Probab=97.26  E-value=0.00017  Score=56.98  Aligned_cols=35  Identities=43%  Similarity=1.319  Sum_probs=32.5

Q ss_pred             cCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          49 ACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        49 ~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .|.++||+|+|.|.+..+   .|.|.|.+.+|.|+.||
T Consensus       625 ~C~~nPC~N~g~C~egwN---rfiCDCs~T~~~G~~Ce  659 (1591)
T KOG3514|consen  625 ICESNPCQNGGKCSEGWN---RFICDCSGTGFEGRTCE  659 (1591)
T ss_pred             ccCCCcccCCCCcccccc---ccccccccCcccCcccc
Confidence            799999999999999874   89999998999999996

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=97.12  E-value=0.00025  Score=27.11  Aligned_cols=13  Identities=38%  Similarity=1.336  Sum_probs=10.6

Q ss_pred             EEeCCCCCcCCCCC
Q psy6902          72 KCRCSGTGYYGKKC   85 (86)
Q Consensus        72 ~C~C~~~g~~G~~C   85 (86)
                      +|.|+ +||+|++|
T Consensus         1 ~C~C~-~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCP-PGWTGPNC   13 (13)
T ss_dssp             EEEE--TTEETTTT
T ss_pred             CccCc-CCCcCCCC
Confidence            58999 89999987

>KOG3516|consensus

Probab=97.07  E-value=0.00041  Score=55.12  Aligned_cols=37  Identities=43%  Similarity=1.192  Sum_probs=33.1

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|.|.+|||+|||.|.+...   .|.|.|...||.|..|+
T Consensus       545 ~drClPN~CehgG~C~Qs~~---~f~C~C~~TGY~GatCH  581 (1306)
T KOG3516|consen  545 SDRCLPNPCEHGGKCSQSWD---DFECNCELTGYKGATCH  581 (1306)
T ss_pred             ccccCCccccCCCccccccc---ceeEecccccccccccc
Confidence            68899999999999999754   89999987899999885

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=96.62  E-value=0.0019  Score=39.76  Aligned_cols=37  Identities=41%  Similarity=0.952  Sum_probs=28.0

Q ss_pred             cccCCC---CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDT---NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~---~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +.+|.+   +-|.|| .|.-... ...+.|+|. .||+|.+||
T Consensus        42 i~~Cp~ey~~YClHG-~C~yI~d-l~~~~CrC~-~GYtGeRCE   81 (139)
T PHA03099         42 IRLCGPEGDGYCLHG-DCIHARD-IDGMYCRCS-HGYTGIRCQ   81 (139)
T ss_pred             cccCChhhCCEeECC-EEEeecc-CCCceeECC-CCccccccc
Confidence            344543   469997 8986543 457999999 899999997

>KOG1217|consensus

Probab=96.58  E-value=0.01  Score=41.77  Aligned_cols=35  Identities=31%  Similarity=0.970  Sum_probs=30.1

Q ss_pred             cccCCCCC-CcCCceEecCCCCCCCeEEeCCCCCcCCCCC
Q psy6902          47 QNACDTNP-CYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC   85 (86)
Q Consensus        47 ~~~C~~~P-C~ngg~C~~~~~~~~~~~C~C~~~g~~G~~C   85 (86)
                      ++.|...+ |.++++|++...   .|.|.|+ +||+|..|
T Consensus       271 ~~~C~~~~~c~~~~~C~~~~~---~~~C~C~-~g~~g~~~  306 (487)
T KOG1217|consen  271 VDSCALIASCPNGGTCVNVPG---SYRCTCP-PGFTGRLC  306 (487)
T ss_pred             ccccCCCCccCCCCeeecCCC---cceeeCC-CCCCCCCC
Confidence            78898875 999999999853   5999999 99999875

>KOG3516|consensus

Probab=96.35  E-value=0.0034  Score=50.20  Aligned_cols=35  Identities=43%  Similarity=1.191  Sum_probs=31.1

Q ss_pred             cCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          49 ACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        49 ~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      -|.+.||+|||.|++...   +|+|.|....|.|..|.
T Consensus       957 hCss~~C~NGG~Cvery~---gytCDCs~Tay~Gp~Cs  991 (1306)
T KOG3516|consen  957 HCSSYPCLNGGHCVERYD---GYTCDCSRTAYDGPFCS  991 (1306)
T ss_pred             ccccccccCCCEEEEecC---ceeeccccCcCCCCccc
Confidence            588999999999999864   99999987899999883

>PHA02887 EGF-like protein; Provisional

Probab=96.26  E-value=0.0055  Score=37.19  Aligned_cols=37  Identities=27%  Similarity=0.775  Sum_probs=28.3

Q ss_pred             cccCCC---CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDT---NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~---~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|..   +-|.| |+|.-... .....|.|. .||+|.+||
T Consensus        83 f~pC~~eyk~YCiH-G~C~yI~d-L~epsCrC~-~GYtG~RCE  122 (126)
T PHA02887         83 FEKCKNDFNDFCIN-GECMNIID-LDEKFCICN-KGYTGIRCD  122 (126)
T ss_pred             ccccChHhhCEeeC-CEEEcccc-CCCceeECC-CCcccCCCC
Confidence            456754   46886 59986554 457899999 899999996

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=96.09  E-value=0.0047  Score=29.90  Aligned_cols=26  Identities=38%  Similarity=0.876  Sum_probs=19.2

Q ss_pred             CCcCCceEecCCCCCCCeEEeCCCCCcCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGYKCRCSGTGYYGK   83 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~   83 (86)
                      .|...++|++...   +|+|.|+ +||.|.
T Consensus         7 ~C~~nA~C~~~~~---~~~C~C~-~Gy~Gd   32 (36)
T PF12947_consen    7 GCHPNATCTNTGG---SYTCTCK-PGYEGD   32 (36)
T ss_dssp             GS-TTCEEEE-TT---SEEEEE--CEEECC
T ss_pred             CCCCCcEeecCCC---CEEeECC-CCCccC
Confidence            4777789999853   8999999 899874

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1225|consensus

Probab=95.87  E-value=0.02  Score=42.65  Aligned_cols=26  Identities=35%  Similarity=0.974  Sum_probs=16.6

Q ss_pred             CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          53 NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        53 ~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ..|.+.|.|++.       .|.|. +||+|..|+
T Consensus       316 adC~g~G~Ci~G-------~C~C~-~Gy~G~~C~  341 (525)
T KOG1225|consen  316 ADCSGHGKCIDG-------ECLCD-EGYTGELCI  341 (525)
T ss_pred             ccCCCCCcccCC-------ceEeC-CCCcCCccc
Confidence            566777777632       46676 677776663

>KOG1217|consensus

Probab=95.72  E-value=0.016  Score=40.75  Aligned_cols=36  Identities=39%  Similarity=1.042  Sum_probs=29.7

Q ss_pred             cccCC--CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACD--TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~--~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|.  ..+|++++.|.+...   .|.|.|+ ++|++..|+
T Consensus       169 ~~~C~~~~~~c~~~~~C~~~~~---~~~C~c~-~~~~~~~~~  206 (487)
T KOG1217|consen  169 LDECIQYSSPCQNGGTCVNTGG---SYLCSCP-PGYTGSTCE  206 (487)
T ss_pred             ccccccCCCCcCCCcccccCCC---CeeEeCC-CCccCCcCc
Confidence            46887  456999999999854   6999999 899998764

>KOG1225|consensus

Probab=95.00  E-value=0.044  Score=40.94  Aligned_cols=61  Identities=36%  Similarity=0.990  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCCee----CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCC
Q psy6902           3 ACDPAHVRPGCRI----QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGT   78 (86)
Q Consensus         3 ~C~~~~c~~gC~~----~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~   78 (86)
                      .|+...|.++|..    ....|.|+++    |   +|..|+..       .|... |..++.+++      + .|.|. +
T Consensus       246 ~c~~~~C~~~c~~~g~c~~G~CIC~~G----f---~G~dC~e~-------~Cp~~-cs~~g~~~~------g-~CiC~-~  302 (525)
T KOG1225|consen  246 LCSTIYCPGGCTGRGQCVEGRCICPPG----F---TGDDCDEL-------VCPVD-CSGGGVCVD------G-ECICN-P  302 (525)
T ss_pred             ccccccCCCCCcccceEeCCeEeCCCC----C---cCCCCCcc-------cCCcc-cCCCceecC------C-EeecC-C
Confidence            4556666666642    3467888887    3   67777643       46544 766666664      3 78888 7


Q ss_pred             CcCCCCCC
Q psy6902          79 GYYGKKCQ   86 (86)
Q Consensus        79 g~~G~~Ce   86 (86)
                      +|+|+.|+
T Consensus       303 g~~G~dCs  310 (525)
T KOG1225|consen  303 GYSGKDCS  310 (525)
T ss_pred             Cccccccc
Confidence            88887763

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=94.09  E-value=0.05  Score=24.02  Aligned_cols=11  Identities=45%  Similarity=1.340  Sum_probs=9.5

Q ss_pred             CeEEeCCCCCcC
Q psy6902          70 GYKCRCSGTGYY   81 (86)
Q Consensus        70 ~~~C~C~~~g~~   81 (86)
                      +|+|.|+ +||.
T Consensus         1 sy~C~C~-~Gy~   11 (24)
T PF12662_consen    1 SYTCSCP-PGYQ   11 (24)
T ss_pred             CEEeeCC-CCCc
Confidence            5899999 8996

>KOG1836|consensus

Probab=91.42  E-value=0.41  Score=40.41  Aligned_cols=68  Identities=29%  Similarity=0.759  Sum_probs=45.1

Q ss_pred             CeeCCccCCCCCCccCCcccccccccccccCCcc----cccCCCCCCcCCceEecCCCCCCCeEEe-CCCCCcCCCCCC
Q psy6902          13 CRIQDNQCICGKGCYPEYKFITQEECMTALKGKR----QNACDTNPCYHGGRCTQTFQDRTGYKCR-CSGTGYYGKKCQ   86 (86)
Q Consensus        13 C~~~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~----~~~C~~~PC~ngg~C~~~~~~~~~~~C~-C~~~g~~G~~Ce   86 (86)
                      |......|.|...-   ++..- ..|..+|.+..    ...|.+=||.+++.|..... .....|. |+ +||+|.+|+
T Consensus       740 Cd~~tG~C~C~~~t---~G~~C-~~C~~GfYg~~~~~~~~dC~~C~Cp~~~~~~~~~~-~~~~iCk~Cp-~gytG~rCe  812 (1705)
T KOG1836|consen  740 CDPRTGQCKCKHNT---FGGQC-AQCVDGFYGLPDLGTSGDCQPCPCPNGGACGQTPE-ILEVVCKNCP-PGYTGLRCE  812 (1705)
T ss_pred             ccCCCCceecccCC---CCCch-hhhcCCCCCccccCCCCCCccCCCCCChhhcCcCc-ccceecCCCC-CCCcccccc
Confidence            54444566655431   11111 34567777653    22399999999999998753 3468898 99 999999985

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=89.62  E-value=0.29  Score=23.54  Aligned_cols=18  Identities=39%  Similarity=0.997  Sum_probs=13.9

Q ss_pred             eEecCCCCCCCeEEeCCCCCcC
Q psy6902          60 RCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        60 ~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      +|++..   ++|+|.|+ +||+
T Consensus        11 ~C~~~~---g~~~C~C~-~Gy~   28 (36)
T PF14670_consen   11 ICVNTP---GSYRCSCP-PGYK   28 (36)
T ss_dssp             EEEEET---TSEEEE-S-TTEE
T ss_pred             CCccCC---CceEeECC-CCCE
Confidence            688774   48999999 8996

...

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=89.41  E-value=0.42  Score=24.10  Aligned_cols=22  Identities=27%  Similarity=0.804  Sum_probs=16.2

Q ss_pred             ceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          59 GRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        59 g~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+|...     ...|.|+ ++|+|++|+
T Consensus        11 ~~C~~~-----~G~C~C~-~~~~G~~C~   32 (49)
T PF00053_consen   11 QTCDPS-----TGQCVCK-PGTTGPRCD   32 (49)
T ss_dssp             SSEEET-----CEEESBS-TTEESTTS-
T ss_pred             CcccCC-----CCEEecc-ccccCCcCc
Confidence            356653     5689999 899999885

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>smart00051 DSL delta serrate ligand

Probab=89.38  E-value=0.56  Score=25.31  Aligned_cols=24  Identities=21%  Similarity=0.545  Sum_probs=17.1

Q ss_pred             CcCCceEecCCCCCCCeEEeCCCCCcCCCCC
Q psy6902          55 CYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC   85 (86)
Q Consensus        55 C~ngg~C~~~~~~~~~~~C~C~~~g~~G~~C   85 (86)
                      +..+.+|...      =.+.|+ +||+|..|
T Consensus        40 ~~~~~~Cd~~------G~~~C~-~Gw~G~~C   63 (63)
T smart00051       40 FFGHYTCDEN------GNKGCL-EGWMGPYC   63 (63)
T ss_pred             ccCCccCCcC------CCEecC-CCCcCCCC
Confidence            4566777432      247799 89999987

>KOG1214|consensus

Probab=89.01  E-value=0.74  Score=36.73  Aligned_cols=60  Identities=27%  Similarity=0.546  Sum_probs=32.0

Q ss_pred             CCCCCCccCCcccccccccccccCCcc--------cccCCCCCCcCC-------c--eEecCCCCCCCeEEeCCCCCcCC
Q psy6902          20 CICGKGCYPEYKFITQEECMTALKGKR--------QNACDTNPCYHG-------G--RCTQTFQDRTGYKCRCSGTGYYG   82 (86)
Q Consensus        20 C~c~~~c~~~~~~~~g~~C~~~~~~~~--------~~~C~~~PC~ng-------g--~C~~~~~~~~~~~C~C~~~g~~G   82 (86)
                      |--.+.|++.-+.|. +.|+.+|...+        .+.=-.+||..+       |  .|+...  .+.|+|.|. +||.|
T Consensus       744 CGp~s~Cin~pg~~r-ceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hG--gs~y~C~CL-PGfsG  819 (1289)
T KOG1214|consen  744 CGPNSVCINLPGSYR-CECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHG--GSTYSCACL-PGFSG  819 (1289)
T ss_pred             CCCCceeecCCCcee-EEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecC--CceEEEeec-CCccC
Confidence            333345555554555 56665543221        122223455544       3  344443  247999999 99998


Q ss_pred             C
Q psy6902          83 K   83 (86)
Q Consensus        83 ~   83 (86)
                      .
T Consensus       820 D  820 (1289)
T KOG1214|consen  820 D  820 (1289)
T ss_pred             C
Confidence            4

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=85.37  E-value=0.81  Score=22.25  Aligned_cols=29  Identities=28%  Similarity=0.630  Sum_probs=19.2

Q ss_pred             CCCCCCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        50 C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      |...+|..++.|+...+  +.+.|+|. .||.
T Consensus         2 C~~~~cP~NA~C~~~~d--G~eecrCl-lgyk   30 (37)
T PF12946_consen    2 CIDTKCPANAGCFRYDD--GSEECRCL-LGYK   30 (37)
T ss_dssp             -SSS---TTEEEEEETT--SEEEEEE--TTEE
T ss_pred             ccCccCCCCcccEEcCC--CCEEEEee-CCcc
Confidence            55667888899998752  57999999 9996

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=84.99  E-value=1.5  Score=28.70  Aligned_cols=30  Identities=33%  Similarity=0.699  Sum_probs=22.4

Q ss_pred             cccCCCC--CCcCCceEecCCCCCCCeEEeCCCCCcCC
Q psy6902          47 QNACDTN--PCYHGGRCTQTFQDRTGYKCRCSGTGYYG   82 (86)
Q Consensus        47 ~~~C~~~--PC~ngg~C~~~~~~~~~~~C~C~~~g~~G   82 (86)
                      .++|...  +|.  ..|.+..   ++|.|.|+ .||+.
T Consensus       187 ~~~C~~~~~~c~--~~C~~~~---g~~~c~c~-~g~~~  218 (224)
T cd01475         187 PDLCATLSHVCQ--QVCISTP---GSYLCACT-EGYAL  218 (224)
T ss_pred             chhhcCCCCCcc--ceEEcCC---CCEEeECC-CCccC
Confidence            5677543  465  4799875   48999999 89975

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>KOG1226|consensus

Probab=82.23  E-value=2.3  Score=33.38  Aligned_cols=33  Identities=27%  Similarity=0.913  Sum_probs=21.0

Q ss_pred             cccCCCC---CCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTN---PCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~---PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|.+.   -|...|+|.-.       +|.|..++|.|..||
T Consensus       585 td~C~~~~G~iCSGrG~C~Cg-------~C~C~~~~~sG~~CE  620 (783)
T KOG1226|consen  585 TDTCESSDGQICSGRGTCECG-------RCKCTDPPYSGEFCE  620 (783)
T ss_pred             CccccCCCCceeCCCceeeCC-------ceEcCCCCcCcchhh
Confidence            6777653   25555555532       578885559998886

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=81.94  E-value=1.8  Score=21.88  Aligned_cols=15  Identities=27%  Similarity=0.935  Sum_probs=10.8

Q ss_pred             eEEeCCCCCcCCCCCC
Q psy6902          71 YKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        71 ~~C~C~~~g~~G~~Ce   86 (86)
                      -+|.|+ ++++|..|+
T Consensus        19 G~C~C~-~~~~G~~C~   33 (50)
T cd00055          19 GQCECK-PNTTGRRCD   33 (50)
T ss_pred             CEEeCC-CcCCCCCCC
Confidence            467787 788887764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	86
1pxx_A	604	Crystal Structure Of Diclofenac Bound To The Cycloo		2e-05
3nt1_A	587	High Resolution Structure Of Naproxen:cox-2 Complex		2e-05
3pgh_A	587	Cyclooxygenase-2 (Prostaglandin Synthase-2) Complex		2e-05
1ddx_A	552	Crystal Structure Of A Mixture Of Arachidonic Acid		2e-05
1cvu_A	552	Crystal Structure Of Arachidonic Acid Bound To The		2e-05
3rr3_A	560	Structure Of (R)-Flurbiprofen Bound To Mcox-2 Lengt		2e-05
3tzi_A	593	X-Ray Crystal Structure Of Arachidonic Acid Bound I		7e-05
3qh0_A	610	X-Ray Crystal Structure Of Palmitic Acid Bound To T		7e-05
3olt_A	592	X-Ray Crystal Structure Of Arachidonic Acid Bound T		7e-05
3mdl_A	587	X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol		7e-05
3krk_A	591	X-Ray Crystal Structure Of Arachidonic Acid Bound I		7e-05
3hs5_A	591	X-Ray Crystal Structure Of Arachidonic Acid Bound T		7e-05
3poy_A	1019	Crystal Structure Of The Alpha-Neurexin-1 Ectodomai		5e-04
3qcw_A	1245	Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6),		7e-04
3r05_A	1254	Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6),		7e-04

>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 604

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 19 NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 54

>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex. Length = 587

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 2  NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 37

>pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With A Non- Selective Inhibitor, Flurbiprofen Length = 587

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 2  NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 37

>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And Prostaglandin Bound To The Cyclooxygenase Active Site Of Cox-2: Prostaglandin Structure Length = 552

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 2  NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 37

>pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Active Site Of Cox-2 Length = 552

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 2  NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 37

>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2 Length = 560

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 2  NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 37

>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of G533v Murine Cox-2 Length = 593

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 10 CCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 43

>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 610

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 27 CCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 60

>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of R513h Murine Cox-2 Length = 592

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 9  CCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 42

>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 587

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 9  CCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 42

>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The Cyclooxygenase Channel Of L531f Murine Cox-2 Length = 591

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 8  CCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 41

>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The Cyclooxygenase Channel Of Cyclooxygenase-2 Length = 591

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC 85
          C +NPC + G C  T  D+  YKC C+ TG+YG+ C
Sbjct: 8  CCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENC 41

>pdb|3POY|A Chain A, Crystal Structure Of The Alpha-Neurexin-1 Ectodomain, Lns 2-6 Length = 1019

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 50  CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           C +NPC + G C   +     Y C CSGTGY G+ C+
Sbjct: 397 CLSNPCKNNGMCRDGWNR---YVCDCSGTGYLGRSCE 430

>pdb|3QCW|A Chain A, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), No Splice Inserts Length = 1245

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 50  CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           C +NPC + G C   +     Y C CSGTGY G+ C+
Sbjct: 622 CLSNPCKNNGMCRDGWNR---YVCDCSGTGYLGRSCE 655

>pdb|3R05|A Chain A, Structure Of Neurexin 1 Alpha (Domains Lns1-Lns6), With Splice Insert Ss3 Length = 1254

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 50  CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
           C +NPC + G C   +     Y C CSGTGY G+ C+
Sbjct: 622 CLSNPCKNNGMCRDGWNR---YVCDCSGTGYLGRSCE 655

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	86
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	1e-07
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	2e-07
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	2e-07
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	9e-07
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	4e-06
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	8e-05

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus} Length = 410

 Score = 46.2 bits (109), Expect = 1e-07
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 48  NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
             C  + C + G C Q +    G+ C CS T + G  C 
Sbjct: 186 TTCQEDSCSNQGVCLQQW---DGFSCDCSMTSFSGPLCN 221

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ... Length = 553

 Score = 45.8 bits (108), Expect = 2e-07
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
          N C   PC H G C +   DR  Y+C C+ TGY G  C 
Sbjct: 3  NPCCYYPCQHQGICVRFGLDR--YQCDCTRTGYSGPNCT 39

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* 3krk_A* ... Length = 587

 Score = 45.5 bits (107), Expect = 2e-07
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
          N C +NPC + G C  T  D+  YKC C+ TG+YG+ C 
Sbjct: 2  NPCCSNPCQNRGECMSTGFDQ--YKCDCTRTGFYGENCT 38

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 43.7 bits (102), Expect = 9e-07
 Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 11/70 (15%)

Query: 17  DNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCS 76
           D+  +      P     +  E             +   C +GG C+          C CS
Sbjct: 168 DSGEVKLDDEPPNSGGGSPCEAG--------EEGEGGVCLNGGVCSVVD---DQAVCDCS 216

Query: 77  GTGYYGKKCQ 86
            TG+ GK C 
Sbjct: 217 RTGFRGKDCS 226

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 42.1 bits (98), Expect = 4e-06
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 48   NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
              C  + C + G C Q +    G+ C CS T + G  C 
Sbjct: 1018 TTCQEDSCSNQGVCLQQW---DGFSCDCSMTSFSGPLCN 1053

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A* Length = 1245

 Score = 38.3 bits (88), Expect = 8e-05
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 48  NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
             C +NPC + G C   +     Y C CSGTGY G+ C+
Sbjct: 620 KPCLSNPCKNNGMCRDGW---NRYVCDCSGTGYLGRSCE 655

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	86
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	99.47
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.4
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.4
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.38
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.33
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.32
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	99.27
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	99.1
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.1
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.07
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	99.05
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	99.05
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.03
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.01
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.95
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.95
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.91
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.91
2vh0_B	134	Activated factor XA light chain; serine protease,	98.89
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.88
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.84
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.82
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	98.79
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.79
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.74
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.72
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.69
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.68
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.68
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.64
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	98.63
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.63
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.55
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.51
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.5
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	98.48
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	98.47
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	98.47
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.41
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.38
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.36
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.36
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.35
2vh0_B	134	Activated factor XA light chain; serine protease,	98.35
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	98.28
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.28
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.21
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.2
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	98.13
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.13
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.1
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.08
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.07
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.04
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	98.03
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.02
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.02
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	97.98
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	97.96
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	97.94
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	97.94
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	97.93
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.92
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.92
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	97.92
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.91
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.82
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	97.81
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	97.8
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	97.77
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	97.7
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	97.69
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.65
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.65
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	97.57
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	97.51
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	97.49
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	97.39
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.39
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.39
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	97.38
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.37
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.36
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.24
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.11
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.08
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.99
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.98
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	96.96
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.94
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.9
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	96.75
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.71
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.67
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.47
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.45
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.13
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	95.91
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	95.89
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.8
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.72
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	95.69
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.66
1szb_A	170	Mannose binding lectin-associated serine protease-	95.62
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	95.55
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	95.42
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	95.19
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.12
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	94.57
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	94.53
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	94.2
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	94.04
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	93.69
1nzi_A	159	Complement C1S component; calcium, innate immunity	90.47
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	90.03
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	89.95
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	89.2
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	87.65
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	85.47
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	84.54

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=99.47  E-value=3.1e-14  Score=75.16  Aligned_cols=46  Identities=22%  Similarity=0.655  Sum_probs=36.0

Q ss_pred             ccccccccCCcccccCCCCCCcCCceEecC--CCCCCCeEEeCCCCCcCCCCCC
Q psy6902          35 QEECMTALKGKRQNACDTNPCYHGGRCTQT--FQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        35 g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~--~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      |..|+..     +|+|.++||+|||+|+..  ....++|+|.|+ +||+|++||
T Consensus         1 G~~c~~~-----~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~-~g~~G~~CE   48 (55)
T 3u7u_G            1 GTSHLVK-----CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCP-NEFTGDRCQ   48 (55)
T ss_dssp             --CCEEE-----CCSTTTTTSCTTCEEEEECCC--CCCEEEEEC-TTEESTTSC
T ss_pred             CCCCccc-----CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCC-CCCcCCCcC
Confidence            3567777     999999999999999632  111458999999 899999997

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.40  E-value=4e-13  Score=81.86  Aligned_cols=68  Identities=34%  Similarity=0.960  Sum_probs=57.9

Q ss_pred             CCCCCCCCCC--Cee---------CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCe
Q psy6902           3 ACDPAHVRPG--CRI---------QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGY   71 (86)
Q Consensus         3 ~C~~~~c~~g--C~~---------~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~   71 (86)
                      .|..+||.++  |..         ..|.|.|+++    |   +|.+|+..     +++|..+||.++++|++..   ++|
T Consensus        54 ~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G----~---~G~~C~~~-----i~~C~~~~C~~~~~C~~~~---g~~  118 (143)
T 4d90_A           54 PCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRG----F---NGIHCQHN-----INECEVEPCKNGGICTDLV---ANY  118 (143)
T ss_dssp             TTSSCCCCTTCEEEECCCEETTEECCEEEECCTT----E---ESTTSCEE-----CCTTTTCCSCTTCEEEEET---TEE
T ss_pred             cCCCCCCCCCCEecCCCccccCCCCCeEeECcCC----C---cCCCcccC-----CCcCCCCCCCCCCEeECCC---CCe
Confidence            5778889886  862         3588999999    4   78999877     8999999999999999874   489


Q ss_pred             EEeCCCCCcCCCCCC
Q psy6902          72 KCRCSGTGYYGKKCQ   86 (86)
Q Consensus        72 ~C~C~~~g~~G~~Ce   86 (86)
                      +|.|+ +||+|++|+
T Consensus       119 ~C~C~-~G~~G~~c~  132 (143)
T 4d90_A          119 SCECP-GEFMGRNCQ  132 (143)
T ss_dssp             EEECC-TTCBSTTSC
T ss_pred             EeECC-CCCccCCce
Confidence            99999 899999875

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.40  E-value=1e-13  Score=79.65  Aligned_cols=54  Identities=30%  Similarity=0.933  Sum_probs=44.1

Q ss_pred             CccCCCCCCccCCcccccccccc-cccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          17 DNQCICGKGCYPEYKFITQEECM-TALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        17 ~~~C~c~~~c~~~~~~~~g~~C~-~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .|.|.|+++    |   +  +|+ ..     +++|.++||+|+|+|++... .++|+|.|+ +||+|++||
T Consensus        31 ~y~C~C~~G----~---~--~C~~~~-----~~~C~~~pC~ngg~C~~~~~-~~~~~C~C~-~G~~G~~Ce   85 (91)
T 1tpg_A           31 VEYCWCNSG----R---A--QCHSVP-----VKSCSEPRCFNGGTCQQALY-FSDFVCQCP-EGFAGKSCE   85 (91)
T ss_dssp             EEEEECSSS----C---C--BCCEEC-----EEECSSCCSCTTCEEEEESS-SSCEEEECC-TTCBSSSCC
T ss_pred             CcEeECCCC----C---c--ccccCc-----CCcccCCCCCCCCEeecCCC-CCCeEeECC-CCCcCCcCC
Confidence            377888888    4   3  676 45     89999999999999998641 148999999 899999986

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.38  E-value=8.7e-13  Score=80.17  Aligned_cols=44  Identities=34%  Similarity=1.007  Sum_probs=28.3

Q ss_pred             cccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          34 TQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        34 ~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|..|+..     +++|..+||.++++|++..   ++|+|.|+ +||+|++||
T Consensus        75 ~G~~C~~~-----~~~C~~~~C~~~g~C~~~~---g~~~C~C~-~G~~G~~C~  118 (135)
T 2vj3_A           75 EGVHCEVN-----TDECASSPCLHNGRCLDKI---NEFQCECP-TGFTGHLCQ  118 (135)
T ss_dssp             ESSSSCEE-----CCTTTTCCSTTTCEEEECS---SCEEEECC-TTEESSSSC
T ss_pred             cCCcceec-----CCcccCCCcCCCCEeECCC---CCeEEECC-CCCcCCccC
Confidence            44455444     6677777777777777653   36777777 677777664

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.33  E-value=2.2e-12  Score=78.34  Aligned_cols=69  Identities=29%  Similarity=0.772  Sum_probs=58.4

Q ss_pred             CCCC--CCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeC
Q psy6902           2 SACD--PAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRC   75 (86)
Q Consensus         2 ~~C~--~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C   75 (86)
                      ++|.  .+||.++  |..  ..|.|.|+++    |   +|..|+..     +++|..+||.++++|++..   ++|+|.|
T Consensus         6 deC~~~~~~C~~~g~C~~~~g~~~C~C~~G----y---~G~~C~~~-----~~~C~~~~C~~~~~C~~~~---g~~~C~C   70 (135)
T 2vj3_A            6 DECSLGANPCEHAGKCINTLGSFECQCLQG----Y---TGPRCEID-----VNECVSNPCQNDATCLDQI---GEFQCIC   70 (135)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTT----E---ESTTSCEE-----CCTTTTCCCCSSCEEEECS---SCEEEEC
T ss_pred             ccccCCCCCCCCCCEeECCCCCEEEECCCC----C---cCCccccc-----CccCCCCCCCCCCEEeCCC---CCceeeC
Confidence            3576  6899875  875  3489999999    4   78899877     8999999999999999874   4899999


Q ss_pred             CCCCcCCCCCC
Q psy6902          76 SGTGYYGKKCQ   86 (86)
Q Consensus        76 ~~~g~~G~~Ce   86 (86)
                      + +||+|..|+
T Consensus        71 ~-~G~~G~~C~   80 (135)
T 2vj3_A           71 M-PGYEGVHCE   80 (135)
T ss_dssp             C-TTEESSSSC
T ss_pred             C-CCCcCCcce
Confidence            9 899999885

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.32  E-value=1.6e-12  Score=79.14  Aligned_cols=77  Identities=32%  Similarity=0.859  Sum_probs=56.8

Q ss_pred             CCCCCCCCCCC--Cee----CCccCCCCCCccCCccccccccccccc-------CCcccccCCCCCCcCCceEecCC---
Q psy6902           2 SACDPAHVRPG--CRI----QDNQCICGKGCYPEYKFITQEECMTAL-------KGKRQNACDTNPCYHGGRCTQTF---   65 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~----~~~~C~c~~~c~~~~~~~~g~~C~~~~-------~~~~~~~C~~~PC~ngg~C~~~~---   65 (86)
                      +.|.++||.++  |..    ..|.|.|+++    |   +|..|+...       ....+++|.++||.++++|+...   
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G----~---~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~   73 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDG----F---TDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYR   73 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTT----C---CTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEE
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCC----C---CCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccc
Confidence            36899999986  874    2489999999    4   788887521       11126889999999999999321   


Q ss_pred             -CCCCCeEEeCCCCCcCCCCCC
Q psy6902          66 -QDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        66 -~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                       ...++|+|.|+ +||+|.+|+
T Consensus        74 ~~~~~~~~C~C~-~G~~G~~C~   94 (143)
T 4d90_A           74 GDTFIGYVCKCP-RGFNGIHCQ   94 (143)
T ss_dssp             TTEECCEEEECC-TTEESTTSC
T ss_pred             cCCCCCeEeECc-CCCcCCCcc
Confidence             11248999999 899999885

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=99.27  E-value=4.9e-12  Score=61.91  Aligned_cols=36  Identities=39%  Similarity=1.198  Sum_probs=33.0

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         3 ~d~C~~~pC~ngg~C~~~~---~~~~C~C~-~G~~G~~Ce   38 (39)
T 1edm_B            3 GDQCESNPCLNGGSCKDDI---NSYECWCP-FGFEGKNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEET---TEEEEECC-TTCCSTTSC
T ss_pred             cccCCCCCCCCCCEeEcCC---CceEeECC-CCCcCCccC
Confidence            7899999999999999874   48999999 899999996

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=99.10  E-value=1.3e-10  Score=60.45  Aligned_cols=36  Identities=36%  Similarity=1.059  Sum_probs=31.6

Q ss_pred             cccCCCC---CCcCCceEe--cCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTN---PCYHGGRCT--QTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~---PC~ngg~C~--~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +++|.++   ||+|||+|+  +..   ++|+|.|+ +||+|.+||
T Consensus         3 i~~C~~~~~~pC~ngg~C~~~~~~---~~~~C~C~-~G~~G~~Ce   43 (53)
T 1egf_A            3 YPGCPSSYDGYCLNGGVCMHIESL---DSYTCNCV-IGYSGDRCQ   43 (53)
T ss_dssp             ECCCCTTSSCSSCSSCEEEEESSS---SCEEEECC-TTCCSSSSC
T ss_pred             cccCCCCCCCcCCCCcEEEeeCCC---CCEEEECC-CCCcCCcCC
Confidence            7889887   999999999  543   48999999 899999986

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.10  E-value=3.3e-11  Score=75.72  Aligned_cols=62  Identities=35%  Similarity=0.925  Sum_probs=48.5

Q ss_pred             CCCC-CeeCCccCCCCCCccCCcccccccccccccCCcccccCCC-CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902           9 VRPG-CRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus         9 c~~g-C~~~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      |.+| |. ..+.|.|+++    |   +|..|+..     +++|.. +||.++|+|++..  +++|+|.|+ +||+|++||
T Consensus       105 C~~g~C~-~~~~C~C~~G----~---~G~~C~~~-----~~~C~~~~~C~~~g~C~~~~--~~~~~C~C~-~G~~G~~Ce  168 (169)
T 2vj2_A          105 CVHGICN-EPWQCLCETN----W---GGQLCDKD-----LNYCGTHQPCLNGGTCSNTG--PDKYQCSCP-EGYSGPNCE  168 (169)
T ss_dssp             CSSEECS-STTCCEECTT----E---ETTTTCEE-----SCHHHHTCCCCTTCEEEECS--TTCEEEECC-TTCCSTTSC
T ss_pred             CCCCCcC-CCCEEeCCCC----C---CCCcccCC-----CCCCCCCCCCCCCCEEcCCC--CCCcEeECC-CCCcCcCcC
Confidence            6666 54 4577777777    4   67777765     788975 8999999999852  248999999 899999986

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.07  E-value=1.2e-10  Score=65.43  Aligned_cols=66  Identities=29%  Similarity=0.829  Sum_probs=50.9

Q ss_pred             CCCCC-CCCCCC-Cee--CCccCCCCCCccCCcccccccccccccCCcccccCC-CCCCcCCceEecCCCCCCCeEEeCC
Q psy6902           2 SACDP-AHVRPG-CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACD-TNPCYHGGRCTQTFQDRTGYKCRCS   76 (86)
Q Consensus         2 ~~C~~-~~c~~g-C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~   76 (86)
                      +.|.. +||.+| |..  ..|.|.|+++    |.. .|..|+ +     +|+|. .+||.| ++|++..   ++|+|.|+
T Consensus         6 deC~~~~~C~~g~C~n~~g~y~C~C~~G----y~~-~g~~C~-d-----ideC~~~~~C~~-~~C~n~~---g~y~C~C~   70 (82)
T 1emn_A            6 DECKEPDVCKHGQCINTDGSYRCECPFG----YIL-AGNECV-D-----TDECSVGNPCGN-GTCKNVI---GGFECTCE   70 (82)
T ss_dssp             CSSSSTTSCSSSEECCCSSCCCEECCTT----EEE-ETTEEE-E-----CCGGGTCCTTSS-SCEEECS---SSEEECCS
T ss_pred             ccCCCCCCcCCCEEEecCCCEEEECCCC----eEC-CCCccC-C-----cccccCCCCCCC-CEeECCC---CCEEeECC
Confidence            35764 889888 764  3599999999    311 367774 3     89997 789998 5999985   48999999


Q ss_pred             CCCcCCC
Q psy6902          77 GTGYYGK   83 (86)
Q Consensus        77 ~~g~~G~   83 (86)
                       +||+|.
T Consensus        71 -~G~~g~   76 (82)
T 1emn_A           71 -EGFEPG   76 (82)
T ss_dssp             -SSSCCC
T ss_pred             -CCeEeC
Confidence             899875

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=99.05  E-value=1.3e-10  Score=59.02  Aligned_cols=37  Identities=32%  Similarity=0.900  Sum_probs=31.1

Q ss_pred             cccCCC---CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDT---NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~---~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +++|.+   +||+| |+|++... .++|+|.|+ +||+|++||
T Consensus         3 i~~C~~~~~~pC~n-G~C~~~~~-~~~~~C~C~-~GytG~~Ce   42 (46)
T 1k36_A            3 ITKCSSDMNGYCLH-GQCIYLVD-MSQNYCRCE-VGYTGVRCE   42 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEETT-TTEEEEEEC-TTCSSTTSC
T ss_pred             cccCCCCCCCCCCC-CEeeccCC-CCCEEEECC-CCCccCCCC
Confidence            688988   99999 89997431 247999999 899999997

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=99.05  E-value=2.7e-10  Score=57.34  Aligned_cols=36  Identities=31%  Similarity=0.770  Sum_probs=29.0

Q ss_pred             cCCCC---CCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          49 ACDTN---PCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        49 ~C~~~---PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|.++   ||+|+|+|+.... .++|+|.|+ +||+|++||
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~-~~~~~C~C~-~G~~G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIES-LDSYTCNCV-IGYSGDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTT-TSSEEEECC-TTEETTTTC
T ss_pred             CcccCCCCCCCCCCEEEeecC-CCCEEEEcC-CCCcCCcCC
Confidence            57777   9999999983111 358999999 899999996

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.03  E-value=9.4e-11  Score=71.85  Aligned_cols=69  Identities=26%  Similarity=0.629  Sum_probs=56.2

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCc---eEecCCCCCC-CeEE
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGG---RCTQTFQDRT-GYKC   73 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg---~C~~~~~~~~-~~~C   73 (86)
                      +.|.++||++|  |..  ..|.|.|+.+    |   +|.+|+..     +++|...++.+++   +|++..   + +|+|
T Consensus        48 d~C~~~pC~n~g~C~~~~g~y~C~C~~G----~---~G~~C~~~-----~~~c~~c~~~~~~C~~~C~~~~---g~~y~C  112 (142)
T 2c4f_L           48 DQCASSPCQNGGSCKDQLQSYICFCLPA----F---EGRNCETH-----KDDQLICVNENGGCEQYCSDHT---GTKRSC  112 (142)
T ss_dssp             CGGGGCCCCTTCEEEEETTEEEEECCTT----E---ESTTSCEE-----GGGCCSTTTGGGGCSSEEECCT---TSCCEE
T ss_pred             CcCcCCCcCCCCEEeCCCCCEEeeCCCC----c---cCCccccC-----ccccccccCCCCCccCEeECCC---CCCEEE
Confidence            35888999986  865  3499999999    4   78999876     6788777888888   999874   5 8999


Q ss_pred             eCCCCCcC----CCCCC
Q psy6902          74 RCSGTGYY----GKKCQ   86 (86)
Q Consensus        74 ~C~~~g~~----G~~Ce   86 (86)
                      .|+ +||+    |++|+
T Consensus       113 ~C~-~Gy~l~~dG~~C~  128 (142)
T 2c4f_L          113 RCH-EGYSLLADGVSCT  128 (142)
T ss_dssp             ECC-TTEEECTTSSCEE
T ss_pred             ECC-CCceECCCCCCCC
Confidence            999 8999    87763

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.01  E-value=8.8e-10  Score=74.43  Aligned_cols=64  Identities=30%  Similarity=0.702  Sum_probs=54.5

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCC---CCCcCCceEecCCCCCCCeEEe
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDT---NPCYHGGRCTQTFQDRTGYKCR   74 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~---~PC~ngg~C~~~~~~~~~~~C~   74 (86)
                      +.|.++||+++  |..  ..|.|.|+++    |   +|.+|+.+     +|+|..   +||.+  +|++..   ++|.|.
T Consensus         6 ~~C~~~pC~~~g~C~~~~~~~~C~C~~g----~---~g~~C~~~-----~~eC~~~~~~~C~~--~C~~~~---g~~~C~   68 (317)
T 3h5c_B            6 SPCISQPCLHNGSCQDSIWGYTCTCSPG----Y---EGSNCELA-----KNECHPERTDGCQH--FCLPGQ---ESYTCS   68 (317)
T ss_dssp             CCTTSCCCTTTCCCCCCSSSCCCCCSSS----C---CSSSSCCC-----SSSCCTTCTTSCSS--EEECCS---SSCEEE
T ss_pred             CcCCCCCCCCCCEeECCCCCeEEECCCC----C---cCCccccC-----cccCCCCCCCCCcC--ccccCC---CeeEEe
Confidence            57999999997  865  3499999999    4   78999977     899987   89998  999875   489999


Q ss_pred             CCCCCcCCC
Q psy6902          75 CSGTGYYGK   83 (86)
Q Consensus        75 C~~~g~~G~   83 (86)
                      |+ +||+|.
T Consensus        69 C~-~g~~~~   76 (317)
T 3h5c_B           69 CA-QGYRLG   76 (317)
T ss_dssp             CC-TTEECC
T ss_pred             cc-cccccc
Confidence            99 899873

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.95  E-value=1.3e-10  Score=62.38  Aligned_cols=36  Identities=42%  Similarity=0.956  Sum_probs=32.5

Q ss_pred             cccCCCCCCcCC--ceEecCCCCCCCeEEeCCCCCcC-CCCCC
Q psy6902          47 QNACDTNPCYHG--GRCTQTFQDRTGYKCRCSGTGYY-GKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ng--g~C~~~~~~~~~~~C~C~~~g~~-G~~Ce   86 (86)
                      +|+|.++||+|+  |+|++..   ++|+|.|+ +||+ |.+|+
T Consensus        11 ~d~C~snPC~nga~gtC~~~~---g~y~C~C~-~Gy~~G~~C~   49 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTCKETN---SGYICRCN-QGYRISLDGT   49 (61)
T ss_dssp             CCHHHHCSSCSSSCCEEEECS---SEEEEECC-TTEEEEECSS
T ss_pred             CCcCcCCCCcCCCccccccCC---CceEeECC-CCCccCCCCC
Confidence            689999999999  8999875   48999999 8999 99885

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.95  E-value=2.2e-10  Score=61.50  Aligned_cols=39  Identities=26%  Similarity=0.753  Sum_probs=31.6

Q ss_pred             cccCCCCCCcCCceEecCC--CCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTF--QDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~--~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|.++||+|||+|++..  ...++|+|.|+ +||+|.+||
T Consensus         6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~-~Gf~G~~Ce   46 (63)
T 1hae_A            6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQ-PGFTGARCT   46 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECC-TTEESTTSC
T ss_pred             cCCCCCCcCCCCcEEecCCccCCCCCEEEECC-CCCcCCccC
Confidence            4678899999999999621  01358999999 899999986

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.91  E-value=4.9e-10  Score=63.26  Aligned_cols=69  Identities=29%  Similarity=0.760  Sum_probs=51.1

Q ss_pred             CCCCCCC--CCCC-Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCCCC--CcCCceEecCCCCCCCeEEe
Q psy6902           2 SACDPAH--VRPG-CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNP--CYHGGRCTQTFQDRTGYKCR   74 (86)
Q Consensus         2 ~~C~~~~--c~~g-C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~P--C~ngg~C~~~~~~~~~~~C~   74 (86)
                      ++|..+|  |.+| |..  ..|.|.|++++...+  ..|..|+ +     +|+|..+|  |. +++|++..   ++|+|.
T Consensus         4 deC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~--~~g~~C~-d-----ideC~~~~~~C~-~~~C~n~~---g~y~C~   71 (86)
T 1lmj_A            4 DECRISPDLCGRGQCVNTPGDFECKCDEGYESGF--MMMKNCM-D-----IDECQRDPLLCR-GGVCHNTE---GSYRCE   71 (86)
T ss_dssp             CTTTTCSSTTTTSCEEEETTEEEECCCSSEEECT--TTSSSEE-E-----CCHHHHCSSTTT-TSEEEEET---TEEEEE
T ss_pred             ccccCCCCCCCCCEEECCCCCEEeeCCCCcCccC--CCCCccC-C-----cccccCCCCcCC-CCEeEcCC---CCEEEE
Confidence            4677766  8888 865  349999999943211  1366775 4     89998887  65 57999985   589999


Q ss_pred             CCCCCcCCC
Q psy6902          75 CSGTGYYGK   83 (86)
Q Consensus        75 C~~~g~~G~   83 (86)
                      |+ +||++.
T Consensus        72 C~-~G~~~~   79 (86)
T 1lmj_A           72 CP-PGHQLS   79 (86)
T ss_dssp             SC-TTSCCC
T ss_pred             Cc-CCcccC
Confidence            99 899874

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.91  E-value=2.5e-10  Score=72.34  Aligned_cols=72  Identities=21%  Similarity=0.486  Sum_probs=53.8

Q ss_pred             CCCCCCCCCC-Cee--CCccCCCCCCccCCcccccccccccccCCcccccCC----CCCCcCCceEecCCC--CCCCeEE
Q psy6902           3 ACDPAHVRPG-CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACD----TNPCYHGGRCTQTFQ--DRTGYKC   73 (86)
Q Consensus         3 ~C~~~~c~~g-C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~----~~PC~ngg~C~~~~~--~~~~~~C   73 (86)
                      ...++||.|| |..  ..|.|.|+++    |.+..+..|+ +     +|+|.    .+||.++++|++...  ..++|+|
T Consensus         7 ~~~~~pC~ng~C~~~~g~~~C~C~~G----~~g~~~~~C~-~-----id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C   76 (186)
T 1z1y_A            7 VTVDTICXNGQLVQMSNHFXCMCNEG----LVHLSENTCE-E-----XNECXXETLGXACGEFGQCIENPDPAQVNMYXC   76 (186)
T ss_dssp             CCTTCCCBTEEEEECSSCEEEEECTT----EEEEETTEEE-E-----CCCCSGGGTTSEEETTEEEEECSSTTSSCSEEE
T ss_pred             cCCCCCCCCCEeECCCCCeEeECCCC----CccCCCCccC-C-----CCcccCCCCCCCCCCCCEeecCCCCcCCCCEEC
Confidence            3468999999 875  3499999999    4211223676 3     79999    789999999998741  0148999


Q ss_pred             eCCCCCcCCCCC
Q psy6902          74 RCSGTGYYGKKC   85 (86)
Q Consensus        74 ~C~~~g~~G~~C   85 (86)
                      .|+ +||+|..+
T Consensus        77 ~C~-~G~~g~~~   87 (186)
T 1z1y_A           77 GCI-EGYTLXED   87 (186)
T ss_dssp             EEC-TTEEEETT
T ss_pred             CCC-CCCccCCC
Confidence            999 89998743

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.89  E-value=3.2e-10  Score=68.89  Aligned_cols=66  Identities=24%  Similarity=0.728  Sum_probs=26.6

Q ss_pred             CCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCccc-ccCCCC--CCcCCceEecCCCCCCCeEEeC
Q psy6902           3 ACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQ-NACDTN--PCYHGGRCTQTFQDRTGYKCRC   75 (86)
Q Consensus         3 ~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~-~~C~~~--PC~ngg~C~~~~~~~~~~~C~C   75 (86)
                      .|.++||+++  |..  ..|.|.|+++    |   +|..|+..     + |+|..+  +|.+  +|++..   ++|+|.|
T Consensus        44 ~C~~~pC~n~g~C~~~~~~y~C~C~~G----~---~G~~C~~~-----i~d~C~~~~~~C~~--~C~~~~---g~y~C~C  106 (134)
T 2vh0_B           44 QCETSPCQNQGKCKDGLGEYTCTCLEG----F---EGKNCELF-----TRKLCSLDNGDCDQ--FCHEEQ---NSVVCSC  106 (134)
T ss_dssp             -------------------------------------------------CCGGGTGGGGCSS--EEEEET---TEEEEEC
T ss_pred             cCCCCCCCCcCCcccCCCCEEeeCCCC----c---cCCccccC-----CCCccccCCCCCCC--EeECCC---CCEEEEC
Confidence            5888999986  864  3599999999    4   78889876     6 789874  5776  999874   4899999


Q ss_pred             CCCCcC----CCCCC
Q psy6902          76 SGTGYY----GKKCQ   86 (86)
Q Consensus        76 ~~~g~~----G~~Ce   86 (86)
                      + +||+    |..|+
T Consensus       107 ~-~Gy~l~~~g~~C~  120 (134)
T 2vh0_B          107 A-RGYTLADNGKACI  120 (134)
T ss_dssp             C-TTEEECTTSSCEE
T ss_pred             C-CCcEECCCCCccC
Confidence            9 8999    87763

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.88  E-value=3.3e-10  Score=73.08  Aligned_cols=67  Identities=24%  Similarity=0.720  Sum_probs=27.0

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCccc-ccCCCC--CCcCCceEecCCCCCCCeEEe
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQ-NACDTN--PCYHGGRCTQTFQDRTGYKCR   74 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~-~~C~~~--PC~ngg~C~~~~~~~~~~~C~   74 (86)
                      +.|.++||++|  |..  ..|.|.|++|    |   +|..|+..     + ++|..+  +|.+  +|++..   ++|.|.
T Consensus        43 deC~~~pC~ngg~C~n~~g~y~C~C~~G----f---~G~~Ce~~-----i~deC~~~~~~C~~--~C~n~~---gsy~C~  105 (195)
T 1nfu_B           43 DQCETSPCQNQGKCKDGLGEYTCTCLEG----F---EGKNCELF-----TRKLCSLDNGDCDQ--FCHEEQ---NSVVCS  105 (195)
T ss_dssp             --------------------------------------------------CCGGGTGGGGCSS--EEEEET---TEEEEE
T ss_pred             cccCCCCCCCCCEeECCCCCeeEeCCCC----c---eecccccc-----ccccccCCCCCCCC--EeECCC---CCeEEE
Confidence            36889999986  864  4599999999    4   78899876     6 789874  5776  999874   489999


Q ss_pred             CCCCCcC----CCCCC
Q psy6902          75 CSGTGYY----GKKCQ   86 (86)
Q Consensus        75 C~~~g~~----G~~Ce   86 (86)
                      |+ +||+    |..|+
T Consensus       106 C~-~Gy~l~~dG~~C~  120 (195)
T 1nfu_B          106 CA-RGYTLADNGKACI  120 (195)
T ss_dssp             CC-TTEEECTTSSCEE
T ss_pred             CC-CCceeCCCCCccc
Confidence            99 8999    88774

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.84  E-value=1.1e-09  Score=67.42  Aligned_cols=66  Identities=29%  Similarity=0.798  Sum_probs=51.8

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCCC--CCcCCceE-ecCCCCCCCeEEe
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTN--PCYHGGRC-TQTFQDRTGYKCR   74 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~--PC~ngg~C-~~~~~~~~~~~C~   74 (86)
                      +.|.++||++|  |..  ..|.|.|+++    |   +|..|+.      +|+|..+  +|.+  +| ++..   ++|+|.
T Consensus        49 deC~~~pC~n~g~C~~~~~~y~C~C~~G----~---~G~~C~~------~deC~~~~~~C~~--~C~~n~~---g~y~C~  110 (146)
T 1x7a_L           49 DQCEPNPCLNGGLCKDDINSYECWCQVG----F---EGKNCEL------DATCNIKNGRCKQ--FCKTGAD---SKVLCS  110 (146)
T ss_dssp             -CCSSCSSCTTCEEEECSSCEEEECCSS----E---ESTTTCE------ECCTTSGGGSCSS--BCCCCSS---SCCCCB
T ss_pred             CcCCCCCCCCCCEeECCCCCEEEecCCC----C---cCCcCCC------CccccCCCCCCcC--CCCCCCC---CCEEeE
Confidence            36889999986  865  3599999999    4   7888875      5889875  5766  89 7764   489999


Q ss_pred             CCCCCcC----CCCCC
Q psy6902          75 CSGTGYY----GKKCQ   86 (86)
Q Consensus        75 C~~~g~~----G~~Ce   86 (86)
                      |+ +||+    |.+|+
T Consensus       111 C~-~Gy~l~~dG~~C~  125 (146)
T 1x7a_L          111 CT-TGYRLAPDQKSCK  125 (146)
T ss_dssp             CC-TTEEECTTSSSEE
T ss_pred             cC-CCcEeCCCCCcCC
Confidence            99 8999    77763

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.82  E-value=3e-09  Score=78.51  Aligned_cols=69  Identities=28%  Similarity=0.721  Sum_probs=55.8

Q ss_pred             CCCCCCCCCCC--CeeC---CccC-CCCCCccCCcccccccccccccCCcccccCCCCC--CcCCc---eEecCCCCCCC
Q psy6902           2 SACDPAHVRPG--CRIQ---DNQC-ICGKGCYPEYKFITQEECMTALKGKRQNACDTNP--CYHGG---RCTQTFQDRTG   70 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~~---~~~C-~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~P--C~ngg---~C~~~~~~~~~   70 (86)
                      ..|.++||.++  |...   +|.| .|+.++.+     .|..|+ .     +++|..+|  |.+++   +|++..   ++
T Consensus         4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytG-----dg~~Ce-D-----iDEC~~~p~~C~~gg~~~~CvNt~---gs   69 (634)
T 1yo8_A            4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLG-----NGTHCE-D-----LDECALVPDICFSTSKVPRCVNTQ---PG   69 (634)
T ss_dssp             CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCS-----CSSSCC-B-----CCTTTTSCCCSCCCSSSCCEEECS---SS
T ss_pred             cccCCCCCCCCCEEecCCCCCeECCcCCCccCC-----CCCCcc-c-----cccccCCCCcccCCccccceeecc---Cc
Confidence            46889999987  8753   3899 99999422     227886 4     89999998  99999   999875   48


Q ss_pred             eEEe-CCCCCcCCCCC
Q psy6902          71 YKCR-CSGTGYYGKKC   85 (86)
Q Consensus        71 ~~C~-C~~~g~~G~~C   85 (86)
                      |+|. |+ +||+|..|
T Consensus        70 Y~C~~C~-~Gy~G~~c   84 (634)
T 1yo8_A           70 FHCLPCP-PRYRGNQP   84 (634)
T ss_dssp             EEECCCC-TTEEECCC
T ss_pred             eecccCC-CCcccCcc
Confidence            9998 99 89998765

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=98.79  E-value=2.6e-09  Score=55.60  Aligned_cols=33  Identities=36%  Similarity=0.896  Sum_probs=27.0

Q ss_pred             CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          52 TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        52 ~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ++||+|||+|+.... .++|+|.|+ +||+|++||
T Consensus        11 ~~pC~nGG~C~~~~~-~~~~~C~C~-~GytG~~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIEA-LDKYACNCV-VGYIGERCQ   43 (53)
T ss_dssp             CCEECTTCEEEEETT-TTEEEEEEC-TTEESTTSC
T ss_pred             CCCCCCCeEEeeecC-CCCEEEecC-CCCcCCCCC
Confidence            689999999983111 348999999 899999996

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.79  E-value=1.2e-09  Score=66.94  Aligned_cols=76  Identities=22%  Similarity=0.577  Sum_probs=53.9

Q ss_pred             CCCCCCCCCCC-Cee--CCccCCCCCCccCCc---------------------------------------cc-------
Q psy6902           2 SACDPAHVRPG-CRI--QDNQCICGKGCYPEY---------------------------------------KF-------   32 (86)
Q Consensus         2 ~~C~~~~c~~g-C~~--~~~~C~c~~~c~~~~---------------------------------------~~-------   32 (86)
                      ++|.++||.+| |..  ..|.|.|++++....                                       +.       
T Consensus         5 deC~~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~   84 (147)
T 2w86_A            5 DECESSPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCT   84 (147)
T ss_dssp             CGGGGCCSBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTE
T ss_pred             ccCcCCCCCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcc
Confidence            46888999988 865  349999998864210                                       00       


Q ss_pred             ---ccccccccccC---Cc---ccccCCCCC--CcCCceEecCCCCCCCeEEeCCCCCcCCC
Q psy6902          33 ---ITQEECMTALK---GK---RQNACDTNP--CYHGGRCTQTFQDRTGYKCRCSGTGYYGK   83 (86)
Q Consensus        33 ---~~g~~C~~~~~---~~---~~~~C~~~P--C~ngg~C~~~~~~~~~~~C~C~~~g~~G~   83 (86)
                         |. +.|..+|.   +.   +||+|..+|  |+|+ +|++..   ++|+|.|+ +||+|.
T Consensus        85 ~c~~~-C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g-~C~n~~---g~y~C~C~-~Gy~g~  140 (147)
T 2w86_A           85 LCQVD-PICGKGYSRIKGTQCEDIDECEVFPGVCKNG-LCVNTR---GSFKCQCP-SGMTLD  140 (147)
T ss_dssp             ECCCC-TTTCTTEEEEETTEEEECCHHHHSTTCSSSS-EEEEET---TEEEEECC-TTCCBC
T ss_pred             cCCCc-ccCCCccccCCCCccCccccccCCCCCCCCC-EEECCC---CCEEeeCC-CCCccC
Confidence               11 35667773   33   489998655  9975 999985   58999999 899864

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.74  E-value=4.2e-09  Score=64.11  Aligned_cols=67  Identities=21%  Similarity=0.540  Sum_probs=46.0

Q ss_pred             CCCCC--Cee--CCccCCCCCCccCCcccccccccccc------cCCcccccCCC--CCCcCCceEecCCCCCCCeEEeC
Q psy6902           8 HVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTA------LKGKRQNACDT--NPCYHGGRCTQTFQDRTGYKCRC   75 (86)
Q Consensus         8 ~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~------~~~~~~~~C~~--~PC~ngg~C~~~~~~~~~~~C~C   75 (86)
                      ||.++  |..  ..|.|.|+.+    |   +|..++..      ....++|+|..  +||.++++|++..   ++|+|.|
T Consensus        54 ~C~~~~~C~n~~g~y~C~C~~G----y---~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~---g~y~C~C  123 (143)
T 2bou_A           54 SCGKFSDCWNTEGSYDCVCSPG----Y---EPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTV---GSYSCRC  123 (143)
T ss_dssp             CCCTTEEEEECSSCEEEEECTT----E---EETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECS---SCEEEEC
T ss_pred             CCCCCCEEEcCCCCeEeECCCC----c---ccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCC---CCEEeeC
Confidence            67755  754  3478888888    3   33322211      11123889974  8999999999875   5999999


Q ss_pred             CCCCcCCCCC
Q psy6902          76 SGTGYYGKKC   85 (86)
Q Consensus        76 ~~~g~~G~~C   85 (86)
                      + +||+|...
T Consensus       124 ~-~Gy~g~~~  132 (143)
T 2bou_A          124 R-PGWKPRHG  132 (143)
T ss_dssp             C-SSSCBCTT
T ss_pred             C-CCcccCCC
Confidence            9 89998653

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.72  E-value=1.5e-10  Score=77.77  Aligned_cols=68  Identities=13%  Similarity=0.104  Sum_probs=48.9

Q ss_pred             CCCCC--Cee--CCccCCCCCCccCCccccccccccccc---------------------CC---cccccCCCCCCcCCc
Q psy6902           8 HVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTAL---------------------KG---KRQNACDTNPCYHGG   59 (86)
Q Consensus         8 ~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~---------------------~~---~~~~~C~~~PC~ngg   59 (86)
                      ++.+|  |..  +.|.|.|+.+    |   +|.+|+...                     .|   ...++|+++||+|+|
T Consensus        39 ~c~ngG~C~~g~~~y~C~Cp~G----f---~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG  111 (267)
T 4fbr_A           39 KSDDGGKTLKGTMTYNGEGPIG----F---RGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGG  111 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEE----E---EEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTT
T ss_pred             CcCCCCeecCCCCCeEEeCCCC----c---ccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCC
Confidence            45555  653  4599999998    3   677776541                     01   114468888888889


Q ss_pred             eEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          60 RCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        60 ~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|++..   .+|+|.|+ +||+|.+|+
T Consensus       112 ~C~~~~---~sy~C~C~-~Gf~G~~Ce  134 (267)
T 4fbr_A          112 KTLTGT---TTYNGEGP-IGFKSEVTD  134 (267)
T ss_dssp             SEEEEE---EEETTSCC-EEEEEEECC
T ss_pred             EEecCC---ccEEeeCC-CCccccCCC
Confidence            998875   48999999 899998885

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.69  E-value=1.3e-08  Score=60.03  Aligned_cols=65  Identities=22%  Similarity=0.491  Sum_probs=46.8

Q ss_pred             CCCCCCC--------CCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCCC--CCcCCceEecCCCC
Q psy6902           2 SACDPAH--------VRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTN--PCYHGGRCTQTFQD   67 (86)
Q Consensus         2 ~~C~~~~--------c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~--PC~ngg~C~~~~~~   67 (86)
                      +.|.++|        |.++  |..  ..|.|.|+++    |   +|..|+...   .+++|..+  +|.+  +|++..  
T Consensus         7 d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G----~---~G~~C~~~~---~~~~C~~~~~~C~~--~C~n~~--   72 (114)
T 1aut_L            7 DQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSG----W---EGRFCQREV---SFLNCSLDNGGCTH--YCLEEV--   72 (114)
T ss_dssp             -CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTT----E---ESTTSCEEC---CSSSSSSGGGGCSS--EEEECS--
T ss_pred             ccccCCCccccccccCCCcCCCCCCCCCcEeeCCCC----C---cCCCcCcCC---cCCcCcCCCCCCCC--EeECCC--
Confidence            3688888        8776  754  3599999998    4   778887641   02468754  3443  899875  


Q ss_pred             CCCeEEeCCCCCcCC
Q psy6902          68 RTGYKCRCSGTGYYG   82 (86)
Q Consensus        68 ~~~~~C~C~~~g~~G   82 (86)
                       ++|+|.|+ +||+|
T Consensus        73 -g~y~C~C~-~G~~~   85 (114)
T 1aut_L           73 -GWRRCSCA-PGYKL   85 (114)
T ss_dssp             -SSEEEECC-TTEEE
T ss_pred             -CCEEeECC-CCeeE
Confidence             48999999 89984

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.68  E-value=1.7e-09  Score=68.40  Aligned_cols=61  Identities=23%  Similarity=0.466  Sum_probs=44.8

Q ss_pred             CCCCCCC--Cee-------CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEe----cCCCCCCCeE
Q psy6902           6 PAHVRPG--CRI-------QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCT----QTFQDRTGYK   72 (86)
Q Consensus         6 ~~~c~~g--C~~-------~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~----~~~~~~~~~~   72 (86)
                      .+||.++  |..       ..|.|.|+++    |   +|..++-.     +++|..+||.++++|+    +..   ++|+
T Consensus        53 ~~~C~~~~~C~~~~~~~~~g~y~C~C~~G----~---~g~~~~C~-----~d~C~~~~C~~~g~C~~~~~~~~---g~~~  117 (186)
T 1z1y_A           53 GXACGEFGQCIENPDPAQVNMYXCGCIEG----Y---TLXEDTCV-----LDVCQYXNCGESGECIVEYLSEI---QSAG  117 (186)
T ss_dssp             TSEEETTEEEEECSSTTSSCSEEEEECTT----E---EEETTEEE-----EGGGTTCCCCTTEEEEEEEETTE---EEEE
T ss_pred             CCCCCCCCEeecCCCCcCCCCEECCCCCC----C---ccCCCCCC-----CCcCcCCCCCCCCEEeeCCcCCC---CCce
Confidence            5677765  753       2477888887    3   44433222     6899999999999999    553   4899


Q ss_pred             EeCCCCCcCC
Q psy6902          73 CRCSGTGYYG   82 (86)
Q Consensus        73 C~C~~~g~~G   82 (86)
                      |.|+ +||+|
T Consensus       118 C~C~-~Gy~g  126 (186)
T 1z1y_A          118 CSCA-IGXVP  126 (186)
T ss_dssp             EEEC-TEEEE
T ss_pred             EECC-CCCcc
Confidence            9999 89998

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.68  E-value=1.3e-08  Score=57.52  Aligned_cols=66  Identities=24%  Similarity=0.631  Sum_probs=46.4

Q ss_pred             CCCCCCC--CCCC-Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCC
Q psy6902           2 SACDPAH--VRPG-CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCS   76 (86)
Q Consensus         2 ~~C~~~~--c~~g-C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~   76 (86)
                      +.|.++|  |.++ |..  ..|.|.|++++....   .|..|+ +     +|+|..+||.  ++|++..   ++|.|.|+
T Consensus         4 deC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~---~g~~C~-d-----ideC~~~~C~--~~C~n~~---g~y~C~C~   69 (87)
T 1z6c_A            4 DECSLKPSICGTAVCKNIPGDFECECPEGYRYNL---KSKSCE-D-----IDECSENMCA--QLCVNYP---GGYTCYCD   69 (87)
T ss_dssp             CSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEET---TTTEEE-C-----CCHHHHSCCS--SEECCCS---SSCCEECC
T ss_pred             ccccCCCCCCCCCEeECCCCCEEEECCCCceECC---CCCcCC-C-----cCeeCCCCCC--CEEEccC---CCEEEECC
Confidence            4677777  7444 864  349999999932110   256775 4     8999999997  6999885   48999994


Q ss_pred             -CCCcC
Q psy6902          77 -GTGYY   81 (86)
Q Consensus        77 -~~g~~   81 (86)
                       ..||.
T Consensus        70 g~~G~~   75 (87)
T 1z6c_A           70 GKKGFK   75 (87)
T ss_dssp             SSSCCB
T ss_pred             CCcCCc
Confidence             14554

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.64  E-value=1.8e-08  Score=61.26  Aligned_cols=67  Identities=27%  Similarity=0.474  Sum_probs=46.6

Q ss_pred             CCCCCC--CeeCCccCCCCCCccCCcc--cccccccccccCCcccccCCCC---CCcCCceEecCCCCCCCeEEeCCCCC
Q psy6902           7 AHVRPG--CRIQDNQCICGKGCYPEYK--FITQEECMTALKGKRQNACDTN---PCYHGGRCTQTFQDRTGYKCRCSGTG   79 (86)
Q Consensus         7 ~~c~~g--C~~~~~~C~c~~~c~~~~~--~~~g~~C~~~~~~~~~~~C~~~---PC~ngg~C~~~~~~~~~~~C~C~~~g   79 (86)
                      ++|.++  |.. .|.|.|++++.+.-.  ...+..|+ +     +|+|...   ||.++++|++..   ++|+|.|+ +|
T Consensus         7 ~~C~~~~~C~~-~~~C~C~~G~~g~~~~~~~~~~~C~-d-----ideC~~~~~~~C~~~~~C~n~~---g~y~C~C~-~G   75 (143)
T 2bou_A            7 RWCPQDSSCVN-ATACRCNPGFSSFSEIITTPMETCD-D-----INECATLSKVSCGKFSDCWNTE---GSYDCVCS-PG   75 (143)
T ss_dssp             TTCCTTEEESS-SSCEEECTTEECSSSSBCSTTCCCE-E-----CCGGGC----CCCTTEEEEECS---SCEEEEEC-TT
T ss_pred             CcCCCCCEEcC-CCEEeCCCCCcCccccccCCCCcCC-c-----cccccCCCCCCCCCCCEEEcCC---CCeEeECC-CC
Confidence            567665  643 489999999432100  00124564 3     8999875   999999999875   48999999 89


Q ss_pred             cCCCC
Q psy6902          80 YYGKK   84 (86)
Q Consensus        80 ~~G~~   84 (86)
                      |+|..
T Consensus        76 y~g~~   80 (143)
T 2bou_A           76 YEPVS   80 (143)
T ss_dssp             EEETT
T ss_pred             cccCc
Confidence            99863

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=98.63  E-value=1.1e-08  Score=52.81  Aligned_cols=34  Identities=26%  Similarity=0.767  Sum_probs=27.0

Q ss_pred             CCCCcCCceEecCCC-CCCCeEEeCCCCCcCCCCCC
Q psy6902          52 TNPCYHGGRCTQTFQ-DRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        52 ~~PC~ngg~C~~~~~-~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ++||+|||+|+.... ..++|+|.|+ +||+|++||
T Consensus        13 ~~pC~NGGtC~~~~~~~~~~y~C~C~-~Gf~G~~Ce   47 (52)
T 3ca7_A           13 AWYCLNDAHCFAVKIADLPVYSCECA-IGFMGQRCE   47 (52)
T ss_dssp             HHTSCTTCEEEEEEETTEEEEEEECC-TTEESTTSC
T ss_pred             CCcCCCCCEEecCccCCCCCEEEECC-CCCcCCCCc
Confidence            679999999996210 0237999999 899999997

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.63  E-value=3e-08  Score=61.00  Aligned_cols=36  Identities=39%  Similarity=1.186  Sum_probs=31.3

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||.|+|+|++..   ++|+|.|+ +||+|..|+
T Consensus        48 ideC~~~pC~n~g~C~~~~---~~y~C~C~-~G~~G~~C~   83 (146)
T 1x7a_L           48 GDQCEPNPCLNGGLCKDDI---NSYECWCQ-VGFEGKNCE   83 (146)
T ss_dssp             --CCSSCSSCTTCEEEECS---SCEEEECC-SSEESTTTC
T ss_pred             cCcCCCCCCCCCCEeECCC---CCEEEecC-CCCcCCcCC
Confidence            8999999999999999885   48999999 899999885

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.55  E-value=3.2e-08  Score=60.47  Aligned_cols=36  Identities=31%  Similarity=1.025  Sum_probs=32.9

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|+|+|++..   ++|+|.|+ +||+|+.|+
T Consensus        47 id~C~~~pC~n~g~C~~~~---g~y~C~C~-~G~~G~~C~   82 (142)
T 2c4f_L           47 GDQCASSPCQNGGSCKDQL---QSYICFCL-PAFEGRNCE   82 (142)
T ss_dssp             CCGGGGCCCCTTCEEEEET---TEEEEECC-TTEESTTSC
T ss_pred             cCcCcCCCcCCCCEEeCCC---CCEEeeCC-CCccCCccc
Confidence            7899999999999999875   48999999 899999885

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.51  E-value=9.6e-10  Score=73.87  Aligned_cols=72  Identities=14%  Similarity=0.117  Sum_probs=49.3

Q ss_pred             CCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccC---------------------Ccc---cccCCCCCC
Q psy6902           4 CDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALK---------------------GKR---QNACDTNPC   55 (86)
Q Consensus         4 C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~---------------------~~~---~~~C~~~PC   55 (86)
                      |.++||++|  |+.  ..|.|.|+.+    |   +|.+|+....                     +..   ...|.++||
T Consensus       102 C~s~pC~ngG~C~~~~~sy~C~C~~G----f---~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c  174 (267)
T 4fbr_A          102 AVSIKSNDGGKTLTGTTTYNGEGPIG----F---KSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKS  174 (267)
T ss_dssp             EEEEECSSTTSEEEEEEEETTSCCEE----E---EEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEEC
T ss_pred             cCCCCCCCCCEEecCCccEEeeCCCC----c---cccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCC
Confidence            567788877  654  3488999888    3   6666665410                     000   123455678


Q ss_pred             cCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          56 YHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        56 ~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .|+|+|++..   .+|+|.|+ +||+|.+|+
T Consensus       175 ~ngg~C~dg~---~~y~C~Cp-~Gf~G~~c~  201 (267)
T 4fbr_A          175 NDGGKTLSGT---MTYNGEGP-IGFRGTLTS  201 (267)
T ss_dssp             SSTTSEEEEE---EEETTSCC-EEEEEEEEE
T ss_pred             CCCCEeeCCC---CCeEEeCC-CCccccccc
Confidence            8888888764   48999999 999998764

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.50  E-value=6.2e-08  Score=57.11  Aligned_cols=36  Identities=31%  Similarity=0.889  Sum_probs=30.7

Q ss_pred             cccCCCCC--------CcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNP--------CYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~P--------C~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++|        |.++|+|++..   ++|+|.|+ +||+|..|+
T Consensus         6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~---~~y~C~C~-~G~~G~~C~   49 (114)
T 1aut_L            6 GDQCLVLPLEHPCASLCCGHGTCIDGI---GSFSCDCR-SGWEGRFCQ   49 (114)
T ss_dssp             --CCCCCSSCCSSSSTTTTSEEECCCS---SCCCEEEC-TTEESTTSC
T ss_pred             cccccCCCccccccccCCCcCCCCCCC---CCcEeeCC-CCCcCCCcC
Confidence            78999999        99999999875   48999999 899999885

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=98.48  E-value=6.2e-08  Score=70.60  Aligned_cols=37  Identities=41%  Similarity=1.016  Sum_probs=33.1

Q ss_pred             cccCCCCCCcCCceEec-CCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQ-TFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~-~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|||+|++ ..   ++|.|.|+++||+|.+||
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~---~~y~C~C~~~G~~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGL---DRYQCDCTRTGYSGPNCT   39 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETT---TEEEEECTTSSEETTTTC
T ss_pred             CCcCCCCCCCCCCCcCCCCC---CceEeeCCCCCcCCCCCC
Confidence            57899999999999998 54   489999996699999997

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=98.47  E-value=6.3e-08  Score=51.18  Aligned_cols=32  Identities=28%  Similarity=0.864  Sum_probs=25.3

Q ss_pred             CCcCCceEecCC-CCCCCeEEeCCCCCcCCCCCC
Q psy6902          54 PCYHGGRCTQTF-QDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        54 PC~ngg~C~~~~-~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ||+|||+|+... .....|.|.|+ +||+|.+||
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~-~Gf~G~~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECA-IGFMGQRCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEEC-TTEESSSSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECC-CCCccCCCc
Confidence            999999998321 00237999999 899999997

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=98.47  E-value=8.3e-08  Score=70.39  Aligned_cols=38  Identities=45%  Similarity=1.074  Sum_probs=32.2

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|||+|++..  .++|.|.|+++||+|.+||
T Consensus         1 vd~C~s~PC~ngG~C~~~~--~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTG--FDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEE--TTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCCCCCCEeeCCC--CCCeEEecCCCCccCCCCC
Confidence            4789999999999999632  2489999985599999997

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.41  E-value=3.4e-08  Score=58.64  Aligned_cols=42  Identities=21%  Similarity=0.495  Sum_probs=31.8

Q ss_pred             cccccccC---Cc---ccccCCC-CCCcCCceEecCCCCCCCeEEeCCCCCcCCC
Q psy6902          36 EECMTALK---GK---RQNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGK   83 (86)
Q Consensus        36 ~~C~~~~~---~~---~~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~   83 (86)
                      +.|..+|.   +.   ++|+|.. +||  +++|++..   ++|+|.|+ +||+|.
T Consensus        63 C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~---g~y~C~C~-~G~~g~  111 (118)
T 1dx5_I           63 CECPEGYILDDGFICTDIDECENGGFC--SGVCHNLP---GTFECICG-PDSALA  111 (118)
T ss_dssp             EECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECS---SSEEEEEC-SSSSCE
T ss_pred             eECCCCccCCCCCccccccccCCCCCC--cCeEEeCC---CCEEEECC-CCCccC
Confidence            44555554   32   3889987 899  68999875   48999999 899864

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.38  E-value=2.5e-07  Score=68.34  Aligned_cols=38  Identities=34%  Similarity=0.768  Sum_probs=30.5

Q ss_pred             cccCCC--CCCcCCceEecCC-CCCCCeEEeCCCCCcCC--CCC
Q psy6902          47 QNACDT--NPCYHGGRCTQTF-QDRTGYKCRCSGTGYYG--KKC   85 (86)
Q Consensus        47 ~~~C~~--~PC~ngg~C~~~~-~~~~~~~C~C~~~g~~G--~~C   85 (86)
                      +++|..  +||.++++|++.. ...++|+|.|+ +||+|  .+|
T Consensus       102 ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~-~Gy~GdG~~C  144 (634)
T 1yo8_A          102 ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQ-TGYAGDGLIC  144 (634)
T ss_dssp             CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEEC-TTEEESSSSE
T ss_pred             cccccCCCcccccCccccccccccccceeeecc-CCccccCccc
Confidence            789986  5999999999874 01148999999 89998  566

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.36  E-value=4.8e-08  Score=62.93  Aligned_cols=36  Identities=36%  Similarity=1.094  Sum_probs=0.0

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|+|+|++..   ++|.|.|+ +||+|..|+
T Consensus        42 ideC~~~pC~ngg~C~n~~---g~y~C~C~-~Gf~G~~Ce   77 (195)
T 1nfu_B           42 GDQCETSPCQNQGKCKDGL---GEYTCTCL-EGFEGKNCE   77 (195)
T ss_dssp             ----------------------------------------
T ss_pred             CcccCCCCCCCCCEeECCC---CCeeEeCC-CCceecccc
Confidence            8999999999999999875   48999999 899999885

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.36  E-value=3.9e-08  Score=70.13  Aligned_cols=56  Identities=36%  Similarity=1.016  Sum_probs=18.4

Q ss_pred             CCCCC-CeeCCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902           8 HVRPG-CRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus         8 ~c~~g-C~~~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|.|| |.. .+.|.|+.+    |   +|..|+       +++|.+ ||.|+|+|+..      ++|.|+ +||+|.+||
T Consensus       398 ~C~nG~C~~-~~~C~C~~G----~---~G~~C~-------~~~C~~-~C~~~g~C~~~------~~C~C~-~G~~G~~C~  454 (463)
T 2wg3_C          398 LCRNGYCTP-TGKCCCSPG----W---EGDFCR-------TAKCEP-ACRHGGVCVRP------NKCLCK-KGYLGPQCE  454 (463)
T ss_dssp             HCCSEEECT-TSCEEECTT----E---ESTTSC-------EECC------------------------------------
T ss_pred             CCCCCccCC-CCeECCCCC----c---CCCcCC-------cCcCCC-CCCCCCEECCC------CEEECC-CCcccCCCC
Confidence            45666 542 357888877    4   778885       457987 99999999863      689999 899999986

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.35  E-value=6.5e-08  Score=56.71  Aligned_cols=65  Identities=25%  Similarity=0.706  Sum_probs=19.4

Q ss_pred             CCCCCCCCCC---C----ee--CCccCCCCCCccCCcccccccccccccCCcccccCCC-CCCcCCceEecCCCCCCCeE
Q psy6902           3 ACDPAHVRPG---C----RI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDT-NPCYHGGRCTQTFQDRTGYK   72 (86)
Q Consensus         3 ~C~~~~c~~g---C----~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~-~PC~ngg~C~~~~~~~~~~~   72 (86)
                      .|+.++|..+   |    ..  ..|.|.|+++    |.+..|..|+ +     +|+|.. +||.  ++|++..   ++|.
T Consensus        26 ~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~G----y~g~~g~~C~-d-----ideC~~~~~C~--~~C~n~~---gsy~   90 (107)
T 2w2n_E           26 AMGTNECLDNNGGCSYVCNDLKIGYECLCPDG----FQLVAQRRCE-D-----IDECQDPDTCS--QLCVNLE---GGYK   90 (107)
T ss_dssp             CBSCCGGGTGGGGCSSEEECCSBSCEEECCTT----CEEETTTEEE-C--------------------------------
T ss_pred             CCcCccCcCCCCCCCCEeEeCCCCeEEECCCC----ccccCCCccc-c-----ccccCCCCCcC--CeeecCC---CCEE
Confidence            5677777642   4    22  2488888888    4211235676 4     899974 8896  6999885   5899


Q ss_pred             EeCCCCCcCCC
Q psy6902          73 CRCSGTGYYGK   83 (86)
Q Consensus        73 C~C~~~g~~G~   83 (86)
                      |.|+ +||++.
T Consensus        91 C~C~-~Gy~~~  100 (107)
T 2w2n_E           91 CQCE-EGFQLD  100 (107)
T ss_dssp             -----------
T ss_pred             EECC-CCceEC
Confidence            9999 899863

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.35  E-value=5.4e-08  Score=58.96  Aligned_cols=36  Identities=36%  Similarity=1.094  Sum_probs=0.0

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|+|+|++..   ++|+|.|+ +||+|..|+
T Consensus        42 ~d~C~~~pC~n~g~C~~~~---~~y~C~C~-~G~~G~~C~   77 (134)
T 2vh0_B           42 GDQCETSPCQNQGKCKDGL---GEYTCTCL-EGFEGKNCE   77 (134)
T ss_dssp             ----------------------------------------
T ss_pred             cCcCCCCCCCCcCCcccCC---CCEEeeCC-CCccCCccc
Confidence            7899999999999999874   48999999 899999875

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=98.28  E-value=4.3e-07  Score=55.80  Aligned_cols=36  Identities=33%  Similarity=1.028  Sum_probs=32.5

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|.++||.++|+|++..   ++|+|.|+ +||+|.+||
T Consensus       119 ~~~c~~~~C~~~g~C~~~~---~~~~c~C~-~g~~G~~Ce  154 (162)
T 1g1s_A          119 TASCQDMSCSKQGECLETI---GNYTCSCY-PGFYGPECE  154 (162)
T ss_dssp             ECCCCTTGGGGSEEEEECS---SSEEEEEC-TTEESTTSC
T ss_pred             eCCCcCCCCCCCCEEecCC---CCceEeCC-CCCcCcccc
Confidence            4679999999999999985   48999999 899999997

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.28  E-value=3.1e-07  Score=61.87  Aligned_cols=36  Identities=42%  Similarity=1.160  Sum_probs=32.1

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|+++|++..   ++|.|.|+ +||+|++|+
T Consensus         5 ~~~C~~~pC~~~g~C~~~~---~~~~C~C~-~g~~g~~C~   40 (317)
T 3h5c_B            5 GSPCISQPCLHNGSCQDSI---WGYTCTCS-PGYEGSNCE   40 (317)
T ss_dssp             -CCTTSCCCTTTCCCCCCS---SSCCCCCS-SSCCSSSSC
T ss_pred             CCcCCCCCCCCCCEeECCC---CCeEEECC-CCCcCCccc
Confidence            7899999999999999875   48999999 899999985

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.21  E-value=1.4e-06  Score=59.70  Aligned_cols=56  Identities=34%  Similarity=0.896  Sum_probs=29.1

Q ss_pred             CCCCCC--CeeCCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCC
Q psy6902           7 AHVRPG--CRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKK   84 (86)
Q Consensus         7 ~~c~~g--C~~~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~   84 (86)
                      ++|.++  |.. .+.|.|+++    |   +|..|+..       .|. .+|.++|+|+.      .+.|.|+ +||+|..
T Consensus       153 ~~C~~~G~C~~-~~~C~C~~G----~---~G~~C~~~-------~C~-~~C~~~G~C~~------~~~C~C~-~G~~G~~  209 (324)
T 2ygq_A          153 GGCRNGGFCNE-RRICECPDG----F---HGPHCEKA-------LCT-PRCMNGGLCVT------PGFCICP-PGFYGVN  209 (324)
T ss_dssp             SCCCSSCEECT-TSCEECCTT----E---ESSSSCEE-------SSS-SCCCTTCEECS------SCCEECC-TTCBTTT
T ss_pred             CCCCCCCEECC-CCeEECCCC----C---cCCCCCCC-------CCC-CCCCCCCEEcC------CCEEeCC-CCccCCC
Confidence            456554  532 477887777    3   55555532       343 24555555543      2345555 4555554


Q ss_pred             C
Q psy6902          85 C   85 (86)
Q Consensus        85 C   85 (86)
                      |
T Consensus       210 C  210 (324)
T 2ygq_A          210 C  210 (324)
T ss_dssp             T
T ss_pred             c
Confidence            4

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.20  E-value=8.6e-07  Score=62.67  Aligned_cols=66  Identities=26%  Similarity=0.697  Sum_probs=48.3

Q ss_pred             CCCCC--CeeCCccCCCCCCccCCccccccccccc----ccCCcc-cccCC-CCCCcCCceEecCCCCCCCeEEeCCCCC
Q psy6902           8 HVRPG--CRIQDNQCICGKGCYPEYKFITQEECMT----ALKGKR-QNACD-TNPCYHGGRCTQTFQDRTGYKCRCSGTG   79 (86)
Q Consensus         8 ~c~~g--C~~~~~~C~c~~~c~~~~~~~~g~~C~~----~~~~~~-~~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~~~g   79 (86)
                      ||.++  |....+.|.|+++    |   +|.+|+.    +|.+.. .++|. .++|.++++|...     .|.|.|+ +|
T Consensus       204 ~C~~~G~C~~~~g~C~C~~G----~---~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~-----~~~C~C~-~G  270 (423)
T 2gy5_A          204 ACMNNGVCHEDTGECICPPG----F---MGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPD-----PYGCSCA-TG  270 (423)
T ss_dssp             CCCTTCEECTTTCCEECCTT----E---ESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETT-----TTEEECC-BT
T ss_pred             CCCCCCEEECCCCcEeCCCC----c---cCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCC-----CCeEEeC-CC
Confidence            78776  8766789999999    4   7777764    222221 23565 4689999999643     7999999 89


Q ss_pred             cCCCCCC
Q psy6902          80 YYGKKCQ   86 (86)
Q Consensus        80 ~~G~~Ce   86 (86)
                      |+|.+|+
T Consensus       271 ~~G~~C~  277 (423)
T 2gy5_A          271 WKGLQCN  277 (423)
T ss_dssp             CBSGGGC
T ss_pred             ccccccc
Confidence            9998875

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=98.13  E-value=2.3e-07  Score=57.38  Aligned_cols=33  Identities=39%  Similarity=1.052  Sum_probs=27.4

Q ss_pred             ccccCCC--CCCcCCceEecCCCCCCCeEEeCCCCCcCCC
Q psy6902          46 RQNACDT--NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGK   83 (86)
Q Consensus        46 ~~~~C~~--~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~   83 (86)
                      +||+|..  +||.| ++|++..   ++|+|.|+ +||+|.
T Consensus       121 dideC~~~~~~C~~-g~C~n~~---gsy~C~C~-~Gy~g~  155 (162)
T 1uzk_A          121 DIDECQELPGLCQG-GKCINTF---GSFQCRCP-TGYYLN  155 (162)
T ss_dssp             ECCHHHHCGGGGBT-SEEEECS---SCEEEECC-TTCCBC
T ss_pred             ccccccCCCCCcCC-CEeEcCC---CCEEeeCC-CCccCC
Confidence            4899976  46987 6999985   49999999 899975

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.13  E-value=4.3e-07  Score=62.70  Aligned_cols=69  Identities=26%  Similarity=0.724  Sum_probs=18.0

Q ss_pred             CCCCCCC--CCCCCee--CCccCCCCCCccCCcccccccccccccCCcccccCC-CCCCcCCceEecCCCCCCCeEEeCC
Q psy6902           2 SACDPAH--VRPGCRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACD-TNPCYHGGRCTQTFQDRTGYKCRCS   76 (86)
Q Consensus         2 ~~C~~~~--c~~gC~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~   76 (86)
                      +.|..++  |.+.|..  ..|.|.|+.|+.-..   .|..| .+     +|+|. ..||.++  |++..   ++|.|.|+
T Consensus         4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~---~~~~C-~d-----~~eC~~~~~C~~~--C~~~~---g~~~C~C~   69 (386)
T 3v65_B            4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTE---DGRTC-QD-----VNECAEEGYCSQG--CTNSE---GAFQCWCE   69 (386)
T ss_dssp             ---------------------------------------------------------CCTTE--EC--------CCEECC
T ss_pred             CcccCCCCCCCCCCcCCCCCcEeECCCCceECC---CCCcc-Cc-----cceeCCcCcccCc--CCCCC---CCCeEEEC
Confidence            3577666  4444753  248999999942111   26788 45     89996 6799874  99874   58999999


Q ss_pred             CCCcC----CCCC
Q psy6902          77 GTGYY----GKKC   85 (86)
Q Consensus        77 ~~g~~----G~~C   85 (86)
                       +||.    |+.|
T Consensus        70 -~g~~l~~d~~~C   81 (386)
T 3v65_B           70 -AGYELRPDRRSC   81 (386)
T ss_dssp             -TTEEECTTSSCE
T ss_pred             -CCceEcCCCCeE
Confidence             8998    6666

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.10  E-value=1.4e-06  Score=60.43  Aligned_cols=66  Identities=24%  Similarity=0.719  Sum_probs=48.7

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCC-CCCCcCCceEecCCCCCCCeEEeCC
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACD-TNPCYHGGRCTQTFQDRTGYKCRCS   76 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~   76 (86)
                      ++|..+|+..+  |..  ..|.|.|+.|    |....|..|+ +     +|+|. ..||.+  .|++..   ++|.|.|+
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G----~~~~~~~~C~-d-----ideC~~~~~C~~--~C~n~~---g~~~C~C~   65 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDG----FQLVAQRRCE-D-----IDECQDPDTCSQ--LCVNLE---GGYKCQCE   65 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTT----EEECSSSCEE-E-----CCCCSTTSSCSS--CCBCCS---SSCBCCCC
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCC----CCcCCCCccc-C-----chhhhccCCCCC--ccCCCc---cceeeecc
Confidence            36777776554  765  3599999999    4222367785 4     89997 478976  899875   58999999


Q ss_pred             CCCcCCC
Q psy6902          77 GTGYYGK   83 (86)
Q Consensus        77 ~~g~~G~   83 (86)
                       +||++.
T Consensus        66 -~g~~~~   71 (400)
T 3p5b_L           66 -EGFQLD   71 (400)
T ss_dssp             -TTCCCC
T ss_pred             -cccccc
Confidence             899853

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.08  E-value=6.4e-06  Score=58.23  Aligned_cols=63  Identities=25%  Similarity=0.700  Sum_probs=43.8

Q ss_pred             CCCCCC--CeeCCccCCCCCCccCCcccccccccc----cccCCcccccCCC-CCCcCCceEecCCCCCCCeEEeCCCCC
Q psy6902           7 AHVRPG--CRIQDNQCICGKGCYPEYKFITQEECM----TALKGKRQNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTG   79 (86)
Q Consensus         7 ~~c~~g--C~~~~~~C~c~~~c~~~~~~~~g~~C~----~~~~~~~~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g   79 (86)
                      ++|.++  |....+.|.|+++    |   +|.+|+    .+|.|.   .|.. -+|.|+++|...      +.|.|+ +|
T Consensus       250 ~~C~~~g~C~~~~~~C~C~~G----~---~G~~C~~~C~~G~~G~---~C~~~C~C~ngg~C~~~------~~C~C~-~G  312 (423)
T 2gy5_A          250 EGCKSYVFCLPDPYGCSCATG----W---KGLQCNEACHPGFYGP---DCKLRCSCNNGEMCDRF------QGCLCS-PG  312 (423)
T ss_dssp             TTTTTCCEEETTTTEEECCBT----C---BSGGGCBCCCTTBCSB---TTCCBCCCTTCCEEETT------TEEECC-TT
T ss_pred             CCCCCCCEECCCCCeEEeCCC----c---ccccccCccCCCCcCC---cccccccCCCCCEecCC------CceECC-CC
Confidence            445554  5555688999888    4   566554    455542   3432 289999999875      249999 89


Q ss_pred             cCCCCCC
Q psy6902          80 YYGKKCQ   86 (86)
Q Consensus        80 ~~G~~Ce   86 (86)
                      |+|.+||
T Consensus       313 ~~G~~Ce  319 (423)
T 2gy5_A          313 WQGLQCE  319 (423)
T ss_dssp             CBSTTSC
T ss_pred             CcCCCCc
Confidence            9999986

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.07  E-value=2.7e-06  Score=58.24  Aligned_cols=26  Identities=50%  Similarity=1.311  Sum_probs=0.0

Q ss_pred             CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCC
Q psy6902          53 NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC   85 (86)
Q Consensus        53 ~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~C   85 (86)
                      +||.++|+|+.      .++|.|+ +||+|..|
T Consensus       249 ~~C~~~g~C~~------~~~C~C~-~G~~G~~C  274 (324)
T 2ygq_A          249 QPCRNGGKCIG------KSKCKCS-KGYQGDLC  274 (324)
T ss_dssp             ---------------------------------
T ss_pred             CcCCCCCEECC------CCEEECC-CCCcCCCC
Confidence            45555555542      2455555 55555554

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.04  E-value=2e-06  Score=47.86  Aligned_cols=34  Identities=38%  Similarity=1.095  Sum_probs=28.7

Q ss_pred             cccCCC-CCCcCCceEecCCCCCCCeEEeCCCCCcC--CCCC
Q psy6902          47 QNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYY--GKKC   85 (86)
Q Consensus        47 ~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~--G~~C   85 (86)
                      +|+|.. +||.| ++|++..   ++|+|.|+ +||+  |..|
T Consensus         5 ideC~~~~~C~~-g~C~n~~---g~y~C~C~-~Gy~~~g~~C   41 (82)
T 1emn_A            5 MDECKEPDVCKH-GQCINTD---GSYRCECP-FGYILAGNEC   41 (82)
T ss_dssp             CCSSSSTTSCSS-SEECCCS---SCCCEECC-TTEEEETTEE
T ss_pred             cccCCCCCCcCC-CEEEecC---CCEEEECC-CCeECCCCcc
Confidence            889986 89987 7999875   48999999 8997  6655

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=98.03  E-value=2.2e-06  Score=47.85  Aligned_cols=37  Identities=30%  Similarity=0.838  Sum_probs=28.1

Q ss_pred             cccCC---CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACD---TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~---~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|.   .+.|+|| +|+.... ...+.|.|+ +||+|.+||
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~~-~~~~~C~C~-~GYtG~RCE   76 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVKE-LRAPSCICH-PGYHGERCH   76 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBGG-GTBCCEEEC-TTEESTTCC
T ss_pred             CCCCCccccCcCCCC-EeeeecC-CCCeEEEcC-CCccccccc
Confidence            56787   7899997 9964432 247899999 899999997

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.02  E-value=2.5e-06  Score=51.91  Aligned_cols=33  Identities=24%  Similarity=0.721  Sum_probs=28.8

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKK   84 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~   84 (86)
                      +|+|+++||.| ++|++..   ++|+|.|+ +||+|..
T Consensus         4 ideC~~~pC~n-g~C~n~~---g~y~C~C~-~G~~g~~   36 (147)
T 2w86_A            4 IDECESSPCIN-GVCKNSP---GSFICECS-SESTLDP   36 (147)
T ss_dssp             CCGGGGCCSBT-SEEEEET---TEEEEECC-TTEEECT
T ss_pred             CccCcCCCCCC-CEeECCC---CCEEeECC-CCcccCC
Confidence            89999999997 5999875   48999999 8999753

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.02  E-value=5.4e-07  Score=53.35  Aligned_cols=67  Identities=25%  Similarity=0.614  Sum_probs=44.1

Q ss_pred             CCCCCCCCCCCCeeC---CccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCC
Q psy6902           2 SACDPAHVRPGCRIQ---DNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGT   78 (86)
Q Consensus         2 ~~C~~~~c~~gC~~~---~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~   78 (86)
                      +.|.++||.+-|...   .|.|.|+++    |   +|..++...-   .++|..+||.  ++|++.    ++|+|.|+ +
T Consensus         5 deC~~~pC~~~C~~~~~g~y~C~C~~G----y---~g~~~~~~~C---~~~C~~~~C~--~~C~~~----~~y~C~C~-~   67 (118)
T 1dx5_I            5 DPCFRANCEYQCQPLDQTSYLCVCAEG----F---APIPHEPHRC---QMFCNQTACP--ADCDPN----TQASCECP-E   67 (118)
T ss_dssp             CGGGGCCCSSEEEECSSSCEEEECCTT----E---EEETTEEEEE---EECCCSSEEE--CEECTT----STTCEECC-T
T ss_pred             ccCCCCCCCCCCCCCCCCCEEeECCCC----c---cccCCCCCcc---ccccCCCCCC--CcccCC----CCeEeECC-C
Confidence            357788888667654   488999888    3   4443211100   2245667776  689874    38999999 8


Q ss_pred             CcC---CCCC
Q psy6902          79 GYY---GKKC   85 (86)
Q Consensus        79 g~~---G~~C   85 (86)
                      ||+   |..|
T Consensus        68 Gy~~~~g~~C   77 (118)
T 1dx5_I           68 GYILDDGFIC   77 (118)
T ss_dssp             TEEEETTTEE
T ss_pred             CccCCCCCcc
Confidence            999   6655

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=97.98  E-value=7e-06  Score=42.05  Aligned_cols=32  Identities=38%  Similarity=0.959  Sum_probs=26.2

Q ss_pred             CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          52 TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        52 ~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|+|| +|..... .+.++|.|+ +||+|.+||
T Consensus        13 ~~yC~nG-~C~~~~~-~~~~~C~C~-~gy~G~RCe   44 (50)
T 3e50_C           13 TQFCFHG-TCRFLVQ-EDKPACVCH-SGYVGARCE   44 (50)
T ss_pred             cCcccCC-EEeeccC-CCCeEEECC-CCCcccCCC
Confidence            5789997 9986432 357999999 899999996

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=97.96  E-value=4.2e-06  Score=62.39  Aligned_cols=50  Identities=28%  Similarity=0.684  Sum_probs=32.5

Q ss_pred             CccCCCC----CCccCCcccccccccccccCCcccccCCC---CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          17 DNQCICG----KGCYPEYKFITQEECMTALKGKRQNACDT---NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        17 ~~~C~c~----~~c~~~~~~~~g~~C~~~~~~~~~~~C~~---~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|.|+    ++       |+|..|+..     ++.|..   .+|.++|+|+.       +.|.|+ +||+|..|+
T Consensus       503 ~g~C~C~~~~~~G-------y~G~~Ce~~-----~~~C~~~~~~~C~~~G~C~~-------g~C~C~-~Gy~G~~Ce  559 (690)
T 3fcs_B          503 CGQCVCHSSDFGK-------ITGKYCECD-----DFSCVRYKGEMCSGHGQCSC-------GDCLCD-SDWTGYYCN  559 (690)
T ss_dssp             SSSEEECCCSSCC-------CBSTTSCBC-----SSCCCBSSSSBGGGSEEEET-------TEEEEC-TTEESSSSC
T ss_pred             CCeeEeecCCCCC-------eeCCCcCcc-----cCcCcCCCCCCCCCCCEecC-------CeeECc-CCCcCCCCc
Confidence            4677777    55       366777655     566764   36777777753       467777 677777664

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=97.94  E-value=5.6e-06  Score=61.74  Aligned_cols=49  Identities=31%  Similarity=0.830  Sum_probs=39.6

Q ss_pred             ccCCCCCCccCCcccccccccc--cccCCcccccCCC---CCCcCCceEecCCCCCCCeEEeC-CCCCcCCCCCC
Q psy6902          18 NQCICGKGCYPEYKFITQEECM--TALKGKRQNACDT---NPCYHGGRCTQTFQDRTGYKCRC-SGTGYYGKKCQ   86 (86)
Q Consensus        18 ~~C~c~~~c~~~~~~~~g~~C~--~~~~~~~~~~C~~---~PC~ngg~C~~~~~~~~~~~C~C-~~~g~~G~~Ce   86 (86)
                      +.|.|+++    |   +|..|+  ..     ++.|..   .+|.++|+|+.       ..|.| + +||+|.+||
T Consensus       545 g~C~C~~G----y---~G~~CeC~~~-----~~~C~~~~g~~C~~~G~C~~-------g~C~C~~-~Gy~G~~Ce  599 (690)
T 3fcs_B          545 GDCLCDSD----W---TGYYCNCTTR-----TDTCMSSNGLLCSGRGKCEC-------GSCVCIQ-PGSYGDTCE  599 (690)
T ss_dssp             TEEEECTT----E---ESSSSCEECC-----CTTTBCTTSSBTSSSCEEET-------TEEECCS-TTCBSTTSC
T ss_pred             CeeECcCC----C---cCCCCccCCC-----CCcccCCCCCCCCCCCEEeC-------CEEECCC-CCccCCCcC
Confidence            77888877    4   777777  44     678876   68999999974       28999 8 899999986

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=97.94  E-value=6.8e-06  Score=49.11  Aligned_cols=31  Identities=26%  Similarity=0.778  Sum_probs=25.2

Q ss_pred             CCcCCceEecCCCCCCCe-EEeCCCCCcCCCCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGY-KCRCSGTGYYGKKCQ   86 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~-~C~C~~~g~~G~~Ce   86 (86)
                      ||+|||+|++... ..+| +|.|+ ++|+|.+||
T Consensus         2 pC~nggtC~~~~~-~~~~~~C~Cp-~g~~G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCVSNKY-FSNIHWCNCP-KKFGGQHCE   33 (122)
T ss_dssp             CCCSSCEEEECTT-TTTCEEEECC-TTEESTTSC
T ss_pred             CCCCcCCcCCCcc-cCCCCCccCC-CCCCCcccc
Confidence            8999999987631 1255 99999 899999986

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=97.93  E-value=1e-05  Score=56.25  Aligned_cols=37  Identities=32%  Similarity=0.923  Sum_probs=32.1

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|.++||+|+|+|++..   .+|.|.|+.++|+|+.|+
T Consensus       185 ~~~C~~~pC~n~g~C~~~~---~~~~C~C~~~~~~G~~C~  221 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQW---DGFSCDCSMTSFSGPLCN  221 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECS---SSEEEECTTTSEESTTSC
T ss_pred             CCCcccccCCCCCEecCCC---CCceEeccCCcccCCCCC
Confidence            5789999999999999875   489999993399999986

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.92  E-value=3e-06  Score=44.25  Aligned_cols=33  Identities=18%  Similarity=0.507  Sum_probs=27.5

Q ss_pred             CCCCCCCCCCC--Cee-------CCccCCCCCCccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI-------QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~-------~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      ++|+++||+||  |..       ..|.|.|+++    |   +|.+|+..
T Consensus         9 ~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g----~---~G~~CE~~   50 (55)
T 3u7u_G            9 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNE----F---TGDRCQNY   50 (55)
T ss_dssp             CSTTTTTSCTTCEEEEECCC--CCCEEEEECTT----E---ESTTSCEE
T ss_pred             CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCC----C---cCCCcCcc
Confidence            47999999999  952       3499999999    4   89999876

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.92  E-value=3.3e-06  Score=55.07  Aligned_cols=61  Identities=30%  Similarity=0.592  Sum_probs=44.9

Q ss_pred             CCCCCC--CeeCCccCCCCCCccCCccc---ccccccccccCCcccccCCCC---CCcCC--ceEecCCCCCCCeEEeCC
Q psy6902           7 AHVRPG--CRIQDNQCICGKGCYPEYKF---ITQEECMTALKGKRQNACDTN---PCYHG--GRCTQTFQDRTGYKCRCS   76 (86)
Q Consensus         7 ~~c~~g--C~~~~~~C~c~~~c~~~~~~---~~g~~C~~~~~~~~~~~C~~~---PC~ng--g~C~~~~~~~~~~~C~C~   76 (86)
                      .+|.++  |.  ...|.|.++    |..   |+|..|+..     ++.|..+   +|.++  |+|...       .|.|.
T Consensus       143 ~~Csg~G~C~--~g~C~C~~g----w~~~~~~~G~~Ce~~-----~~~C~~~~g~~C~~~~~G~C~~g-------~C~C~  204 (217)
T 2p28_B          143 IICSGLGDCV--CGQCLCHTS----DVPGKLIYGQYCECD-----TINCERYNGQVCGGPGRGLCFCG-------KCRCH  204 (217)
T ss_dssp             CBGGGTEEEE--TTEEEECCC----CSTTCCEESTTSCEE-----SSCSCEETTEETTCTTTEEEETT-------EEEEC
T ss_pred             CCCCCCCEEe--CCceECCCC----CCCcccEECCCcccC-----CccCCCCCCCCCCCCCCcEEeCC-------eeECC
Confidence            455433  54  356888777    533   688888865     5678765   89988  999852       79999


Q ss_pred             CCCcCCCCCC
Q psy6902          77 GTGYYGKKCQ   86 (86)
Q Consensus        77 ~~g~~G~~Ce   86 (86)
                       +||+|..|+
T Consensus       205 -~G~~G~~C~  213 (217)
T 2p28_B          205 -PGFEGSACQ  213 (217)
T ss_dssp             -TTEESTTSC
T ss_pred             -CCCccCCcC
Confidence             899999986

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=97.92  E-value=3.9e-06  Score=46.96  Aligned_cols=30  Identities=33%  Similarity=0.995  Sum_probs=25.9

Q ss_pred             cccCCCCC--CcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTNP--CYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~P--C~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      +|+|.++|  |.++ +|++..   ++|+|.|+ +||+
T Consensus         3 ideC~~~~~~C~~g-~C~n~~---g~y~C~C~-~Gy~   34 (86)
T 1lmj_A            3 IDECRISPDLCGRG-QCVNTP---GDFECKCD-EGYE   34 (86)
T ss_dssp             CCTTTTCSSTTTTS-CEEEET---TEEEECCC-SSEE
T ss_pred             cccccCCCCCCCCC-EEECCC---CCEEeeCC-CCcC
Confidence            78998877  9875 999985   48999999 8998

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.91  E-value=1.7e-06  Score=48.58  Aligned_cols=34  Identities=29%  Similarity=0.901  Sum_probs=28.8

Q ss_pred             cccCCCCC--CcCCceEecCCCCCCCeEEeCCCCCcC----CCCC
Q psy6902          47 QNACDTNP--CYHGGRCTQTFQDRTGYKCRCSGTGYY----GKKC   85 (86)
Q Consensus        47 ~~~C~~~P--C~ngg~C~~~~~~~~~~~C~C~~~g~~----G~~C   85 (86)
                      +|+|.++|  | ++++|++..   ++|+|.|+ +||+    |+.|
T Consensus         3 ideC~~~~~~C-~~~~C~n~~---g~y~C~C~-~G~~~~~~g~~C   42 (87)
T 1z6c_A            3 VDECSLKPSIC-GTAVCKNIP---GDFECECP-EGYRYNLKSKSC   42 (87)
T ss_dssp             SCSSSSSSSSB-TTSSCCCBT---TBCCCSSS-TTCEEETTTTEE
T ss_pred             cccccCCCCCC-CCCEeECCC---CCEEEECC-CCceECCCCCcC
Confidence            78999988  8 889999875   48999999 8998    5555

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.82  E-value=6e-06  Score=59.40  Aligned_cols=62  Identities=21%  Similarity=0.535  Sum_probs=11.7

Q ss_pred             CCccCCCCCCccCCcccccccccc---cccCCc--ccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          16 QDNQCICGKGCYPEYKFITQEECM---TALKGK--RQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        16 ~~~~C~c~~~c~~~~~~~~g~~C~---~~~~~~--~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ..+.|.|+++    |   +|.+|+   .+|++.  .++.|.+.+|.++|.+...-. ...+.|.|+ +||+|.+||
T Consensus       458 ~tg~C~C~~g----~---~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~-~~tG~C~C~-~G~~G~~Ce  524 (525)
T 4aqs_A          458 ETGYCYCKRL----V---TGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCS-EDSGQCSCL-PHMIGRQCN  524 (525)
T ss_dssp             TTCCBCBCTT----C---CSTTTCC---------------------------------------------------
T ss_pred             CCCEEECCCC----C---cCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccC-CCCCeeECC-CCCcCCCCC
Confidence            4477888888    4   666664   455543  367899999999998875421 124689999 899999996

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=97.81  E-value=1.3e-05  Score=41.03  Aligned_cols=32  Identities=31%  Similarity=0.864  Sum_probs=25.3

Q ss_pred             CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          52 TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        52 ~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|+| |+|.-... ...+.|.|+ +||+|.+||
T Consensus        13 ~~yC~n-G~C~~~~~-~~~~~C~C~-~gy~G~RCe   44 (50)
T 1iox_A           13 KHYCIK-GRCRFVVA-EQTPSCVCD-EGYIGARCE   44 (50)
T ss_dssp             TTSCTT-CCEEEETT-TTEEEECCC-TTEETTTTC
T ss_pred             cCcccC-CEEEeEcC-CCCeEEECC-CCcccCCCC
Confidence            478999 79964322 347899999 899999997

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=97.80  E-value=2.3e-05  Score=40.11  Aligned_cols=36  Identities=33%  Similarity=0.966  Sum_probs=27.1

Q ss_pred             ccCC---CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACD---TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~---~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ++|.   .+.|+|| +|.-... .+.+.|.|+ .||+|.+||
T Consensus        10 ~~C~~~~~~yC~nG-~C~~i~~-~~~~~C~C~-~gy~G~RCe   48 (50)
T 2rnl_A           10 NPCNAEFQNFCIHG-ECKYIEH-LEAVTCKCQ-QEYFGERCG   48 (50)
T ss_dssp             CTTTTTGGGTCSSS-EEEEETT-TTEEEEECC-SSCCSSSCC
T ss_pred             cccCchhhCcCCCC-EEEEecC-CCCeeEECC-CCccccccc
Confidence            4565   3689985 9983322 347899999 899999997

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=97.77  E-value=1.1e-05  Score=49.12  Aligned_cols=36  Identities=36%  Similarity=1.030  Sum_probs=32.1

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|.++||.++++|.+..   ..|.|.|. +||+|.+||
T Consensus       119 ~~~~~~~pc~~~g~C~~~~---~~~~c~C~-~g~~g~~Ce  154 (157)
T 1g1t_A          119 TAACTNTSCSGHGECVETI---NNYTCKCD-PGFSGLKCE  154 (157)
T ss_dssp             ECCCCTTGGGGSEEEEEET---TEEEEEEC-TTEESTTSC
T ss_pred             cCCCCCCCCCCCCEeecCC---CCeeEECC-CCccCcccc
Confidence            4678889999999999875   48999999 899999997

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=97.70  E-value=1.5e-05  Score=49.73  Aligned_cols=41  Identities=32%  Similarity=0.888  Sum_probs=27.4

Q ss_pred             cccccCCcccccCCCCC-CcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          38 CMTALKGKRQNACDTNP-CYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        38 C~~~~~~~~~~~C~~~P-C~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      |..+|.|..-++|..+| |.|+ +|+.      .|+|.|+ +||+|..|+
T Consensus        87 C~~G~~G~~C~~C~~~~~C~~g-~C~~------~~~C~C~-~G~~G~~C~  128 (169)
T 2vj2_A           87 CQYGWQGLYCDKCIPHPGCVHG-ICNE------PWQCLCE-TNWGGQLCD  128 (169)
T ss_dssp             ECTTEESSSSCEECCCTTCSSE-ECSS------TTCCEEC-TTEETTTTC
T ss_pred             CCCCCCCCCcccCCCCCCCCCC-CcCC------CCEEeCC-CCCCCCccc
Confidence            33333333333466666 8875 8872      6889999 899998885

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=97.69  E-value=1.7e-05  Score=44.92  Aligned_cols=43  Identities=26%  Similarity=0.367  Sum_probs=32.9

Q ss_pred             CccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCC
Q psy6902          17 DNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKC   85 (86)
Q Consensus        17 ~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~C   85 (86)
                      +|.|.|..+    |   +|..|+       +++|..+||+|+      .   ++|+|.|+ +||+  +|
T Consensus         1 sy~C~C~~g----~---~g~~c~-------~~~c~~~pC~n~------~---~~y~C~C~-~G~~--~C   43 (91)
T 1tpg_A            1 SYQVICRDE----K---TQMIYQ-------QHQSWLRPVLRS------N---RVEYCWCN-SGRA--QC   43 (91)
T ss_dssp             CCCCCCBCS----S---SCCBCC-------SSCEEEEECSSS------S---CEEEEECS-SSCC--BC
T ss_pred             CeeeECCCC----C---cCCeEC-------CCcccCCccccC------C---CCcEeECC-CCCc--cc
Confidence            377888888    3   667774       678988998875      1   38999999 8997  55

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.65  E-value=6.3e-06  Score=43.73  Aligned_cols=40  Identities=20%  Similarity=0.413  Sum_probs=31.8

Q ss_pred             CCCCCCCCCC--Cee-------CCccCCCCCCccCCcccccccccccccCCcccccCCCCC
Q psy6902           3 ACDPAHVRPG--CRI-------QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNP   54 (86)
Q Consensus         3 ~C~~~~c~~g--C~~-------~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~P   54 (86)
                      .|.++||+||  |..       ..|.|.|+++    |   +|.+|+..     ++++...+
T Consensus         8 ~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~G----f---~G~~Ce~~-----i~~~~~~~   56 (63)
T 1hae_A            8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG----F---TGARCTEN-----VPMKVQNQ   56 (63)
T ss_dssp             HHHHTTSCTTCEEEEEESSSSSCCEEEECCTT----E---ESTTSCEE-----CCSSCTTC
T ss_pred             CCCCCcCCCCcEEecCCccCCCCCEEEECCCC----C---cCCccCcC-----cCcccccc
Confidence            4678999997  874       3589999999    4   88999987     78776654

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.65  E-value=1.6e-05  Score=48.95  Aligned_cols=34  Identities=29%  Similarity=0.764  Sum_probs=28.8

Q ss_pred             cccCC-CCCCcCCceEecCCCCCCCeEEeCCCCCcC----CCCC
Q psy6902          47 QNACD-TNPCYHGGRCTQTFQDRTGYKCRCSGTGYY----GKKC   85 (86)
Q Consensus        47 ~~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~----G~~C   85 (86)
                      ||+|+ ++||. +++|++..   ++|+|.|+ +||+    |+.|
T Consensus         3 ideC~~~~~C~-~~~C~n~~---gsy~C~C~-~Gy~~~~~g~~C   41 (162)
T 1uzk_A            3 VNECLDPTTCI-SGNCVNTP---GSYICDCP-PDFELNPTRVGC   41 (162)
T ss_dssp             CCGGGSTTSSB-TSEEEEET---TEEEEECC-TTCEECTTSSBE
T ss_pred             cccCCCCCCCC-CCEeECCC---CCEEEeCC-CCCeECCCCCcc
Confidence            89998 48997 58999985   48999999 8998    7666

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=97.57  E-value=6.3e-05  Score=46.20  Aligned_cols=31  Identities=26%  Similarity=0.778  Sum_probs=25.1

Q ss_pred             CCcCCceEecCCCCCCCe-EEeCCCCCcCCCCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGY-KCRCSGTGYYGKKCQ   86 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~-~C~C~~~g~~G~~Ce   86 (86)
                      ||+|||+|+.... ...| +|.|+ .||+|++||
T Consensus        14 pC~NGGtC~~~~~-~s~~~~C~Cp-~g~~G~~Ce   45 (145)
T 2i9a_A           14 DCLNGGTCVSNKY-FSNIHWCNCP-KKFGGQHCE   45 (145)
T ss_dssp             CCCTTCEEEECSS-STTCEEEECC-TTEESTTSC
T ss_pred             CCCCCCCcCCCcc-ccCCccccCC-CCCCCCcee
Confidence            9999999987521 1256 89999 899999986

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=97.51  E-value=7.9e-05  Score=58.30  Aligned_cols=37  Identities=32%  Similarity=0.931  Sum_probs=32.1

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|.++||.|+|+|++...   +|.|.|+.++|+|++|+
T Consensus      1017 ~~~C~~~pC~ngG~C~~~~~---~~~C~C~~~g~~G~~C~ 1053 (1245)
T 3qcw_A         1017 STTCQEDSCSNQGVCLQQWD---GFSCDCSMTSFSGPLCN 1053 (1245)
T ss_dssp             CCCCCTTSSSSSCEEEEETT---EEEEECTTSSCBSTTSC
T ss_pred             cCceECCcCCCCCEeCCCCC---CCEEECCCCCCCCCCcc
Confidence            47899999999999998853   89999982399999985

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=97.49  E-value=7.3e-05  Score=45.76  Aligned_cols=36  Identities=36%  Similarity=1.054  Sum_probs=31.5

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ...|..++|.+.|+|++..   .+|.|.|. +||+|..||
T Consensus       119 ~~~~~~~~C~~~g~C~~~~---~~~~c~C~-~g~~g~~C~  154 (164)
T 3cfw_A          119 TASCQPWSCSGHGECVEII---NNYTCNCD-VGYYGPQCQ  154 (164)
T ss_dssp             ECCCCTTSSCSSEEEEEET---TEEEEEEC-TTCBSSSSC
T ss_pred             cCCCCCCcCCCCCeecccC---CCceeeeC-CCccccccc
Confidence            3568889999999999875   38999999 899999986

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=97.39  E-value=0.00011  Score=57.40  Aligned_cols=37  Identities=43%  Similarity=1.156  Sum_probs=32.2

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|.++||+|+|+|++..   ..|.|.|+.+||+|..|+
T Consensus       619 ~~~C~~~pC~ngg~C~~~~---~~~~C~C~~~g~~G~~C~  655 (1245)
T 3qcw_A          619 AKPCLSNPCKNNGMCRDGW---NRYVCDCSGTGYLGRSCE  655 (1245)
T ss_dssp             SCGGGSCCCCTTCEEEECS---SSEEEECTTTTEESTTSC
T ss_pred             CCCCCccCCCCCCEEeCCC---CCeEEECCCCCcccccCc
Confidence            4689999999999999875   389999984599999985

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.39  E-value=0.00013  Score=36.96  Aligned_cols=30  Identities=33%  Similarity=0.843  Sum_probs=24.4

Q ss_pred             cccCCC----------CCCcCCceEecCCCCCCCeEEeCCCCCcCC
Q psy6902          47 QNACDT----------NPCYHGGRCTQTFQDRTGYKCRCSGTGYYG   82 (86)
Q Consensus        47 ~~~C~~----------~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G   82 (86)
                      +|+|..          .||.+  +|++..   ++|.|.|+ +||++
T Consensus         4 idEC~~~~~~~~~~~~~~C~~--~C~n~~---Gsy~C~C~-~Gy~~   43 (53)
T 1apq_A            4 LDECASRSKSGEEDPQPQCQH--LCHNYV---GGYFCSCR-PGYEL   43 (53)
T ss_dssp             CCTTTCSTTTCCCSSSCTTSS--EEEEET---TEEEEECS-TTCEE
T ss_pred             cccccCcccccccccCCCCCC--EeECCC---CCeEEECC-CCCeE
Confidence            778875          67974  899985   58999999 89974

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.39  E-value=7.8e-05  Score=35.59  Aligned_cols=31  Identities=23%  Similarity=0.725  Sum_probs=24.9

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECM   39 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~   39 (86)
                      +.|.++||++|  |..  ..|.|.|+.+    |   +|.+|+
T Consensus         4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G----~---~G~~Ce   38 (39)
T 1edm_B            4 DQCESNPCLNGGSCKDDINSYECWCPFG----F---EGKNCE   38 (39)
T ss_dssp             CTTTTCCCCTTCEEEEETTEEEEECCTT----C---CSTTSC
T ss_pred             ccCCCCCCCCCCEeEcCCCceEeECCCC----C---cCCccC
Confidence            46999999997  864  3489999998    4   778876

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=97.38  E-value=0.00012  Score=46.81  Aligned_cols=31  Identities=32%  Similarity=0.998  Sum_probs=26.1

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ..|. .+|.|||.|+..      -.|.|+ .||+|..|+
T Consensus       149 ~~C~-~~C~ngG~Cv~P------~~C~C~-~Gw~G~~C~  179 (188)
T 2ygo_A          149 AECP-GGCRNGGFCNER------RICECP-DGFHGPHCE  179 (188)
T ss_dssp             CCCT-TCCCTTCEECTT------SCEECC-TTCBTTTTC
T ss_pred             CccC-CCCCCCCEeCCC------CcccCc-CCCCCCCCc
Confidence            3564 689999999974      379999 899999996

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.37  E-value=0.00028  Score=52.25  Aligned_cols=50  Identities=28%  Similarity=0.893  Sum_probs=35.2

Q ss_pred             CccCCCCCCccCCcccccccccccccCCcccccCC-CCCCcCCceEecCCCCCCCeEEeCCCCCcCC
Q psy6902          17 DNQCICGKGCYPEYKFITQEECMTALKGKRQNACD-TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYG   82 (86)
Q Consensus        17 ~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G   82 (86)
                      .|.|.|+.|    |....|..|+ +     +|+|. ..+|.+  +|++..   ++|.|.|+ +||++
T Consensus       314 ~~~C~C~~G----~~~~~~~~C~-d-----ideC~~~~~C~~--~C~n~~---g~y~C~C~-~G~~~  364 (699)
T 1n7d_A          314 GYECLCPDG----FQLVAQRRCE-D-----IDECQDPDTCSQ--LCVNLE---GGYKCQCE-EGFQL  364 (699)
T ss_dssp             CCCCCCCSS----SCCCSSSCCC-C-----CCCCSSSSSCTT--TCCBCS---SCBCCCCC-SSCBC
T ss_pred             CcEEeCCCC----eEcCCCCccc-C-----ccccCCCCcccc--ccccCC---CCeeeeee-ccccc
Confidence            377777777    3111245565 3     89997 578864  799875   59999999 89985

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.36  E-value=8.8e-05  Score=36.68  Aligned_cols=32  Identities=22%  Similarity=0.454  Sum_probs=25.7

Q ss_pred             CCCCC---CCCCC--Cee----CCccCCCCCCccCCcccccccccccc
Q psy6902           3 ACDPA---HVRPG--CRI----QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         3 ~C~~~---~c~~g--C~~----~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      .|.++   ||+||  |..    ..|.|.|+.+    |   +|.+|+..
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G----~---~G~~Ce~~   42 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIG----Y---SGDRCQTR   42 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTT----E---ETTTTCEE
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCC----C---cCCcCCcc
Confidence            57777   99997  872    3499999999    4   88999865

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.24  E-value=0.00012  Score=54.67  Aligned_cols=50  Identities=30%  Similarity=0.768  Sum_probs=35.7

Q ss_pred             cCCCCCCccCCcccccccccccccCCcccccCCCC---CCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          19 QCICGKGCYPEYKFITQEECMTALKGKRQNACDTN---PCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        19 ~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~---PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .|.|.++    |   +|..|+...   .++.|..+   +|.++|+|+.       ..|.|+ +||+|.+|+
T Consensus       539 ~C~C~~G----~---~G~~Cec~~---~~~~C~~~~g~~Cs~~G~C~~-------g~C~C~-~Gy~G~~Ce  591 (687)
T 3k6s_B          539 KCRCHPG----F---EGSACQCER---TTEGCLNPRRVECSGRGRCRC-------NVCECH-SGYQLPLCQ  591 (687)
T ss_dssp             EEEECTT----C---CSTTSCSCC---SSCTTBCTTCSBTSSSCCBCS-------SCBCCS-TTCCTTTTC
T ss_pred             EEEcCCC----C---cCCCCccCC---CCCCCCCCCCCCCCCCCcCCC-------CEEECC-CCCcCCCCC
Confidence            5666665    4   666665210   15678765   8999999975       369999 899999986

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.11  E-value=9e-05  Score=37.03  Aligned_cols=32  Identities=31%  Similarity=0.673  Sum_probs=25.8

Q ss_pred             CCCC---CCCCCC-Cee----CCccCCCCCCccCCcccccccccccc
Q psy6902           3 ACDP---AHVRPG-CRI----QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         3 ~C~~---~~c~~g-C~~----~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      .|.+   +||+|| |..    ..|.|.|+++    |   +|.+|+..
T Consensus         5 ~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~G----y---tG~~Ce~~   44 (46)
T 1k36_A            5 KCSSDMNGYCLHGQCIYLVDMSQNYCRCEVG----Y---TGVRCEHF   44 (46)
T ss_dssp             CCCTTCCSSCSSEEEEEETTTTEEEEEECTT----C---SSTTSCCC
T ss_pred             cCCCCCCCCCCCCEeeccCCCCCEEEECCCC----C---ccCCCCcc
Confidence            5777   999999 864    2489999999    4   89999864

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.08  E-value=0.00018  Score=53.69  Aligned_cols=49  Identities=37%  Similarity=0.819  Sum_probs=38.3

Q ss_pred             ccCCCC------CCccCCcccccccccccccCCcccccCCC---CCCcC--CceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          18 NQCICG------KGCYPEYKFITQEECMTALKGKRQNACDT---NPCYH--GGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        18 ~~C~c~------~~c~~~~~~~~g~~C~~~~~~~~~~~C~~---~PC~n--gg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ..|.|+      ++       |+|..|+..     .+.|..   .+|.+  +|+|+..       .|.|+ +||+|..|+
T Consensus       493 G~C~C~~~~~~~~G-------~~G~~Ce~~-----~~~C~~~~~~~C~~~~~G~C~~g-------~C~C~-~G~~G~~Ce  552 (687)
T 3k6s_B          493 GQCLCHTSDVPGKL-------IYGQYCECD-----TINCERYNGQVCGGPGRGLCFCG-------KCRCH-PGFEGSACQ  552 (687)
T ss_dssp             TEEEECCCCSTTCC-------EESTTSCEE-----SSCSCEETTEETSHHHHEEEETT-------EEEEC-TTCCSTTSC
T ss_pred             CEEEcCCCCCCCCC-------ccccccccc-----cccccCCCCcCcCCCCCCeEECC-------EEEcC-CCCcCCCCc
Confidence            477777      55       478888865     667874   47998  8999842       79999 899999986

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.99  E-value=0.00054  Score=37.12  Aligned_cols=25  Identities=32%  Similarity=0.757  Sum_probs=20.9

Q ss_pred             cccCCC--CCCcCCceEecCCCCCCCeEEe
Q psy6902          47 QNACDT--NPCYHGGRCTQTFQDRTGYKCR   74 (86)
Q Consensus        47 ~~~C~~--~PC~ngg~C~~~~~~~~~~~C~   74 (86)
                      ||+|..  ++|.++++|+++.   ++|+|.
T Consensus         3 idEC~~~~~~C~~~~~C~Nt~---Gsy~C~   29 (71)
T 2kl7_A            3 VNECLTIPEACKGEMKCINHY---GGYLCL   29 (71)
T ss_dssp             SCCTTCCCCSCTTEEEEEETT---CCEEEE
T ss_pred             cccccCCCCCCCCCCEeECCC---CCeEec
Confidence            788975  5799889999985   589999

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.98  E-value=0.00032  Score=52.91  Aligned_cols=30  Identities=30%  Similarity=0.835  Sum_probs=23.4

Q ss_pred             cccCC-CCCCcCCceEecCCCCCCCeEEeCCCCCcCC
Q psy6902          47 QNACD-TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYG   82 (86)
Q Consensus        47 ~~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G   82 (86)
                      +|+|. ..+|.  ..|++..   ++|.|.|+ +||..
T Consensus       352 ideC~~~~~C~--~~C~n~~---gsy~C~C~-~Gy~l  382 (791)
T 3m0c_C          352 IDECQDPDTCS--QLCVNLE---GGYKCQCE-EGFQL  382 (791)
T ss_dssp             CCCCSSSSSCT--TTCCBCS---SCBCCCCC-SSEEC
T ss_pred             CcccCCCCCCC--CeeecCC---CCceeecC-CCCEe
Confidence            89997 34554  5899875   58999999 89964

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=96.96  E-value=0.00069  Score=34.52  Aligned_cols=33  Identities=27%  Similarity=0.675  Sum_probs=26.1

Q ss_pred             CCCCCC---CCCCC--Ce--e--CCccCCCCCCccCCcccccccccccc
Q psy6902           2 SACDPA---HVRPG--CR--I--QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~---~c~~g--C~--~--~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      ..|.++   ||+||  |.  .  ..|.|.|+.+    |   +|.+|+..
T Consensus         4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G----~---~G~~Ce~~   45 (53)
T 1egf_A            4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIG----Y---SGDRCQTR   45 (53)
T ss_dssp             CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTT----C---CSSSSCCC
T ss_pred             ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCC----C---cCCcCCcc
Confidence            368776   99997  87  2  3499999999    4   88999875

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.94  E-value=0.00045  Score=47.81  Aligned_cols=34  Identities=29%  Similarity=0.728  Sum_probs=28.9

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcC---CCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYY---GKKC   85 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~---G~~C   85 (86)
                      |+|..+|+..+++|++..   ++|.|.|+ +||+   |+.|
T Consensus         1 ~eC~~~~~~c~~~C~~~~---~~y~C~C~-~G~~~~~~~~C   37 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLK---IGYECLCP-DGFQLVAQRRC   37 (400)
T ss_dssp             CCTTTTGGGCSSEEEECS---SSEEEECC-TTEEECSSSCE
T ss_pred             CcccCCCCCCCCEeECCC---CCeEEECC-CCCCcCCCCcc
Confidence            578889988889999985   48999999 8998   6666

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=96.90  E-value=0.00039  Score=45.22  Aligned_cols=54  Identities=30%  Similarity=0.786  Sum_probs=37.0

Q ss_pred             ccCCCCCCccCCcccccccccccccCCc----ccccCC----CCCCcCCceEecCCCCCCCeEEeCCCCC------cCCC
Q psy6902          18 NQCICGKGCYPEYKFITQEECMTALKGK----RQNACD----TNPCYHGGRCTQTFQDRTGYKCRCSGTG------YYGK   83 (86)
Q Consensus        18 ~~C~c~~~c~~~~~~~~g~~C~~~~~~~----~~~~C~----~~PC~ngg~C~~~~~~~~~~~C~C~~~g------~~G~   83 (86)
                      ..|.|.++    |   +|.+|+-.....    ....|.    ..+|.++|+|+.       ..|.|. +|      |+|.
T Consensus       107 g~C~C~~G----~---~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-------g~C~C~-~gw~~~~~~~G~  171 (217)
T 2p28_B          107 GICRCDTG----Y---IGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-------GQCLCH-TSDVPGKLIYGQ  171 (217)
T ss_dssp             TEEEECTT----E---ESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-------TEEEEC-CCCSTTCCEEST
T ss_pred             CEEECCCC----c---cCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-------CceECC-CCCCCcccEECC
Confidence            67888887    4   777776431100    012354    578999999984       269999 89      7999


Q ss_pred             CCC
Q psy6902          84 KCQ   86 (86)
Q Consensus        84 ~Ce   86 (86)
                      +||
T Consensus       172 ~Ce  174 (217)
T 2p28_B          172 YCE  174 (217)
T ss_dssp             TSC
T ss_pred             Ccc
Confidence            886

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=96.75  E-value=0.00057  Score=39.65  Aligned_cols=30  Identities=33%  Similarity=0.747  Sum_probs=22.2

Q ss_pred             cccCCCC--CCcCCceEecCCCCCCCeEEeCCCCCcCC
Q psy6902          47 QNACDTN--PCYHGGRCTQTFQDRTGYKCRCSGTGYYG   82 (86)
Q Consensus        47 ~~~C~~~--PC~ngg~C~~~~~~~~~~~C~C~~~g~~G   82 (86)
                      +|+|..+  +|.  .+|++..   ++|.|.|+ +||+|
T Consensus        29 ~neC~~~~~~C~--~~C~n~~---g~y~C~C~-~Gy~g   60 (107)
T 2w2n_E           29 TNECLDNNGGCS--YVCNDLK---IGYECLCP-DGFQL   60 (107)
T ss_dssp             CCGGGTGGGGCS--SEEECCS---BSCEEECC-TTCEE
T ss_pred             CccCcCCCCCCC--CEeEeCC---CCeEEECC-CCccc
Confidence            5566543  443  4899875   48999999 89997

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.71  E-value=0.00086  Score=39.83  Aligned_cols=54  Identities=26%  Similarity=0.618  Sum_probs=37.4

Q ss_pred             CCCCC--CeeC----Cc-cCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCc
Q psy6902           8 HVRPG--CRIQ----DN-QCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGY   80 (86)
Q Consensus         8 ~c~~g--C~~~----~~-~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~   80 (86)
                      ||+||  |...    .+ .|.|+.+    |   +|.+|++.     ++    .+|.++     .   ...|.+.+. .++
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g----~---~G~~Ce~~-----~~----~~C~~g-----~---G~~YrG~~~-~t~   56 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKK----F---GGQHCEID-----KS----KTCYEG-----N---GHFYRGKAS-TDT   56 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTT----E---ESTTSCEE-----SS----CCSBCS-----S---CTTCCSCCC-BBT
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCC----C---CCcccccc-----Cc----CCCccc-----c---cccceeecc-ccc
Confidence            89998  8643    35 8999999    4   88999876     33    245543     1   126888887 788


Q ss_pred             CCCCCC
Q psy6902          81 YGKKCQ   86 (86)
Q Consensus        81 ~G~~Ce   86 (86)
                      +|..|+
T Consensus        57 sG~~Cq   62 (122)
T 2fd6_A           57 MGRPCL   62 (122)
T ss_dssp             TSCBBC
T ss_pred             cCCccc
Confidence            887764

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.67  E-value=0.00069  Score=41.94  Aligned_cols=66  Identities=24%  Similarity=0.574  Sum_probs=41.8

Q ss_pred             CCCCC--CeeC----CccC-CCCCCccCCcccccccccc---cccCCcc------cccCCCCCCcCC------ceEecCC
Q psy6902           8 HVRPG--CRIQ----DNQC-ICGKGCYPEYKFITQEECM---TALKGKR------QNACDTNPCYHG------GRCTQTF   65 (86)
Q Consensus         8 ~c~~g--C~~~----~~~C-~c~~~c~~~~~~~~g~~C~---~~~~~~~------~~~C~~~PC~ng------g~C~~~~   65 (86)
                      ||.++  |...    .+.| .|+.+    |   +|.+|+   .+|++..      .+.|.+=+|.++      +.|... 
T Consensus         2 ~C~~~g~C~~~~~~g~~~C~~C~~g----~---~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~-   73 (162)
T 1klo_A            2 PCPGGSSCAIVPKTKEVVCTHCPTG----T---AGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRL-   73 (162)
T ss_dssp             CSCTTCCEEECSSSCCEEECSCCTT----E---ESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTT-
T ss_pred             cCcCcCcccccCCCCCEEeCCCCCC----C---cCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCC-
Confidence            67766  8653    2789 79988    4   677765   4555432      124544456554      456433 


Q ss_pred             CCCCCeEEe-CCCCCcCCCCCC
Q psy6902          66 QDRTGYKCR-CSGTGYYGKKCQ   86 (86)
Q Consensus        66 ~~~~~~~C~-C~~~g~~G~~Ce   86 (86)
                          ...|. |+ ++|+|.+||
T Consensus        74 ----tG~C~~C~-~g~~G~~Ce   90 (162)
T 1klo_A           74 ----TGECLKCI-YNTAGFYCD   90 (162)
T ss_dssp             ----TCCBCCBC-TTEETTTTC
T ss_pred             ----CCcccCCC-CCCcCCCcC
Confidence                45794 99 899999885

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.47  E-value=0.00062  Score=46.08  Aligned_cols=35  Identities=34%  Similarity=0.936  Sum_probs=27.5

Q ss_pred             cccCC--CCCCcCCceEecCCCCCCCeEEeCCCCCcC--CCCC
Q psy6902          47 QNACD--TNPCYHGGRCTQTFQDRTGYKCRCSGTGYY--GKKC   85 (86)
Q Consensus        47 ~~~C~--~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~--G~~C   85 (86)
                      +|+|.  ..+|..++.|++..   ++|.|.|. +||+  |..|
T Consensus         5 iDEC~~~~~~C~~~a~C~Nt~---Gsy~C~C~-~Gy~GnG~~C   43 (285)
T 1gl4_A            5 QQTCANNRHQCSVHAECRDYA---TGFCCRCV-ANYTGNGRQC   43 (285)
T ss_dssp             --CHHHHGGGSCTTEEEEECS---SCEEEEEC-TTEEECSSSE
T ss_pred             chhccCCCCCCCCCCEeEcCC---CCeEEEcC-CCCCCCCCcC
Confidence            78897  56899999999985   59999999 8998  4444

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.45  E-value=0.0023  Score=39.56  Aligned_cols=31  Identities=35%  Similarity=0.863  Sum_probs=25.4

Q ss_pred             CCcCCceEecCCCCCCCeEE-eCCCCCcCCCCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGYKC-RCSGTGYYGKKCQ   86 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~~C-~C~~~g~~G~~Ce   86 (86)
                      ||.|+++|+.... .+.++| .|+ ++|+|.+||
T Consensus         2 ~C~~~g~C~~~~~-~g~~~C~~C~-~g~~G~~Ce   33 (162)
T 1klo_A            2 PCPGGSSCAIVPK-TKEVVCTHCP-TGTAGKRCE   33 (162)
T ss_dssp             CSCTTCCEEECSS-SCCEEECSCC-TTEESTTSC
T ss_pred             cCcCcCcccccCC-CCCEEeCCCC-CCCcCCCCc
Confidence            7999999987642 246899 799 899999986

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.13  E-value=0.00099  Score=47.44  Aligned_cols=31  Identities=42%  Similarity=0.962  Sum_probs=24.8

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +++|.. +|.| |+|+..      ++|.|+ +||+|..|+
T Consensus       392 ~~~C~~-~C~n-G~C~~~------~~C~C~-~G~~G~~C~  422 (463)
T 2wg3_C          392 TSECSR-LCRN-GYCTPT------GKCCCS-PGWEGDFCR  422 (463)
T ss_dssp             CCHHHH-HCCS-EEECTT------SCEEEC-TTEESTTSC
T ss_pred             cccccC-CCCC-CccCCC------CeECCC-CCcCCCcCC
Confidence            456765 7998 799863      489999 899999985

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=95.91  E-value=0.0056  Score=43.97  Aligned_cols=49  Identities=18%  Similarity=0.382  Sum_probs=33.4

Q ss_pred             ccccccCCcc---cccCCCCCCcCCceEecCCC-CCCCeEEeCCCCCcCCCCCC
Q psy6902          37 ECMTALKGKR---QNACDTNPCYHGGRCTQTFQ-DRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        37 ~C~~~~~~~~---~~~C~~~PC~ngg~C~~~~~-~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .|..+|.+..   .+.|.+.+|.++++|.+... ....+.|.|+ +||+|.+|+
T Consensus       422 ~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~-~g~~G~~Ce  474 (525)
T 4aqs_A          422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCK-RLVTGQRCD  474 (525)
T ss_dssp             EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBC-TTCCSTTTC
T ss_pred             CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECC-CCCcCCCcc
Confidence            4556666543   45677788888877765321 0135789999 899999985

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=95.89  E-value=0.00078  Score=35.59  Aligned_cols=32  Identities=25%  Similarity=0.629  Sum_probs=24.5

Q ss_pred             CCCCCCCCCC----CeeC--CccCCCCCCccCCccccc-ccccccc
Q psy6902           3 ACDPAHVRPG----CRIQ--DNQCICGKGCYPEYKFIT-QEECMTA   41 (86)
Q Consensus         3 ~C~~~~c~~g----C~~~--~~~C~c~~~c~~~~~~~~-g~~C~~~   41 (86)
                      .|.++||++|    |...  .|.|.|+++    |   + |.+|+..
T Consensus        13 ~C~snPC~nga~gtC~~~~g~y~C~C~~G----y---~~G~~C~~~   51 (61)
T 2k2s_B           13 ACSSNPCGPEAAGTCKETNSGYICRCNQG----Y---RISLDGTGN   51 (61)
T ss_dssp             HHHHCSSCSSSCCEEEECSSEEEEECCTT----E---EEEECSSSC
T ss_pred             cCcCCCCcCCCccccccCCCceEeECCCC----C---ccCCCCCCC
Confidence            5778999985    7653  499999999    4   7 8888754

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.80  E-value=0.0015  Score=44.81  Aligned_cols=36  Identities=31%  Similarity=0.755  Sum_probs=0.0

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcC----CCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYY----GKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~----G~~Ce   86 (86)
                      +|+|..+|+....+|.+..   ++|.|.|+ +||+    |+.|+
T Consensus         3 ~~~C~~~~~~c~~~C~~~~---g~~~C~C~-~G~~l~~~~~~C~   42 (386)
T 3v65_B            3 EENCNVNNGGCAQKCQMIR---GAVQCTCH-TGYRLTEDGRTCQ   42 (386)
T ss_dssp             --------------------------------------------
T ss_pred             cCcccCCCCCCCCCCcCCC---CCcEeECC-CCceECCCCCccC
Confidence            7899988866556897653   47999999 8998    77763

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.72  E-value=0.019  Score=43.38  Aligned_cols=34  Identities=32%  Similarity=0.973  Sum_probs=25.1

Q ss_pred             ccCCCCCCcCCc-----eEecCCCCCCCeEEeCCCCCcC---CCCC
Q psy6902          48 NACDTNPCYHGG-----RCTQTFQDRTGYKCRCSGTGYY---GKKC   85 (86)
Q Consensus        48 ~~C~~~PC~ngg-----~C~~~~~~~~~~~C~C~~~g~~---G~~C   85 (86)
                      ++|..++|.++.     .|++..   ++|.|.|+ +||.   |+.|
T Consensus       308 ~~C~~~~C~~~~~~C~~~C~~~~---~~y~C~C~-~Gy~l~~g~~C  349 (791)
T 3m0c_C          308 KECGTNECLDNNGGCSHVCNDLK---IGYECLCP-DGFQLVAQRRC  349 (791)
T ss_dssp             TTBSCCSTTTGGGGCSSEEEECS---BSEEEECC-TTCEEETTTEE
T ss_pred             cccccccccccccCccccccCCC---CCcccCCC-CCCccCCCCcc
Confidence            347777777554     899875   48999999 8995   5554

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=95.69  E-value=0.005  Score=31.42  Aligned_cols=28  Identities=25%  Similarity=0.729  Sum_probs=20.9

Q ss_pred             ccCCC--CCCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          48 NACDT--NPCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        48 ~~C~~--~PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      |+|..  .+|.+  .|++..   ++|.|.|+ +||.
T Consensus         2 dEC~~~~~~C~~--~C~nt~---Gsy~C~C~-~Gy~   31 (55)
T 2jkh_L            2 KLCSLDNGDCDQ--FCHEEQ---NSVVCSCA-RGYT   31 (55)
T ss_dssp             CCTTTGGGGCSS--EEEEET---TEEEEECC-TTEE
T ss_pred             ccccCCCCCcCc--EeEcCC---CCeEEeCC-CCCE
Confidence            45654  35764  799874   58999999 8996

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.66  E-value=0.0019  Score=45.90  Aligned_cols=27  Identities=33%  Similarity=0.931  Sum_probs=0.0

Q ss_pred             CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          53 NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        53 ~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .||+|||+|++.     . .|.|+ +||+|..|+
T Consensus       371 ~~C~ngg~C~~~-----~-~C~C~-~G~~G~~Ce  397 (426)
T 3zyj_B          371 LHCQNGGTCHNN-----V-RCLCP-AAYTGILCE  397 (426)
T ss_dssp             ----------------------------------
T ss_pred             ccCCCCCCcCCC-----C-CCcCC-CCCcCCCCc
Confidence            489999999875     3 89999 999998875

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.62  E-value=0.0054  Score=37.69  Aligned_cols=33  Identities=33%  Similarity=1.081  Sum_probs=25.9

Q ss_pred             cccCCCCC-----CcCCceEecCCCCCCCeEEeCCCCCcC----CCCC
Q psy6902          47 QNACDTNP-----CYHGGRCTQTFQDRTGYKCRCSGTGYY----GKKC   85 (86)
Q Consensus        47 ~~~C~~~P-----C~ngg~C~~~~~~~~~~~C~C~~~g~~----G~~C   85 (86)
                      +++|...+     |.+  .|++..   ++|.|.|+ +||+    ++.|
T Consensus       124 i~eC~~~~~~~~~C~~--~C~n~~---g~~~C~C~-~Gy~l~~d~~~C  165 (170)
T 1szb_A          124 IDECQVAPGEAPTCDH--HCHNHL---GGFYCSCR-AGYVLHRNKRTC  165 (170)
T ss_dssp             CCTTCCCTTSCCSSSS--EEEEET---TEEEEECC-TTEEECTTSSCE
T ss_pred             cCcccCCCCCCCccCC--ccccCC---CCEEEeCC-CCcEECCCCCcc
Confidence            78898655     876  799874   48999999 8997    5555

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=95.55  E-value=0.0018  Score=32.83  Aligned_cols=29  Identities=17%  Similarity=0.378  Sum_probs=22.4

Q ss_pred             CCCCCCC--Cee------CCccCCCCCCccCCcccccccccccc
Q psy6902           6 PAHVRPG--CRI------QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         6 ~~~c~~g--C~~------~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      ++||+||  |..      ..|.|.|+.+    |   +|.+|+..
T Consensus        13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~G----f---~G~~Ce~~   49 (52)
T 3ca7_A           13 AWYCLNDAHCFAVKIADLPVYSCECAIG----F---MGQRCEYK   49 (52)
T ss_dssp             HHTSCTTCEEEEEEETTEEEEEEECCTT----E---ESTTSCEE
T ss_pred             CCcCCCCCEEecCccCCCCCEEEECCCC----C---cCCCCccc
Confidence            3599998  874      2489999999    4   88999854

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=95.42  E-value=0.0024  Score=32.62  Aligned_cols=29  Identities=24%  Similarity=0.499  Sum_probs=23.1

Q ss_pred             CCCCCCC--Cee----CCccCCCCCCccCCcccccccccccc
Q psy6902           6 PAHVRPG--CRI----QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         6 ~~~c~~g--C~~----~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      ++||+||  |..    ..|.|.|+.+    |   +|.+|+..
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~G----y---tG~~Ce~~   45 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVG----Y---IGERCQYR   45 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTT----E---ESTTSCEE
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCC----C---cCCCCCcC
Confidence            6899997  862    2389999999    3   89999864

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=95.19  E-value=0.0042  Score=37.67  Aligned_cols=37  Identities=22%  Similarity=0.489  Sum_probs=25.1

Q ss_pred             CCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccccCCcccccCCC
Q psy6902           3 ACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDT   52 (86)
Q Consensus         3 ~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~   52 (86)
                      +|.++||.++  |..  ..|.|.|++|    |   +|.+|+..      ++|.+
T Consensus       121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g----~---~G~~Ce~~------~~c~~  161 (162)
T 1g1s_A          121 SCQDMSCSKQGECLETIGNYTCSCYPG----F---YGPECEYV------RDDDD  161 (162)
T ss_dssp             CCCTTGGGGSEEEEECSSSEEEEECTT----E---ESTTSCEE------CC---
T ss_pred             CCcCCCCCCCCEEecCCCCceEeCCCC----C---cCcccccC------cccCC
Confidence            5777888876  764  4588999888    3   78888763      56754

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.12  E-value=0.0062  Score=44.81  Aligned_cols=33  Identities=24%  Similarity=0.639  Sum_probs=27.7

Q ss_pred             CCCCCCCCCCC--Cee---CCccCCCC-CCccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI---QDNQCICG-KGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~---~~~~C~c~-~~c~~~~~~~~g~~C~~~   41 (86)
                      +.|.++||+||  |..   ..|.|.|+ .|    |   +|.+|+..
T Consensus         2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G----~---~G~~Ce~~   40 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTG----F---YGENCTTP   40 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSS----E---ETTTTCEE
T ss_pred             CCCCCCCCCCCCEeeCCCCCCeEEecCCCC----c---cCCCCCCc
Confidence            57999999998  973   45999999 88    4   89999875

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=94.57  E-value=0.0075  Score=44.00  Aligned_cols=33  Identities=21%  Similarity=0.457  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCC--Cee-C--CccCCCC-CCccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI-Q--DNQCICG-KGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~-~--~~~C~c~-~~c~~~~~~~~g~~C~~~   41 (86)
                      +.|.++||+||  |.. .  .|.|.|+ .|       |+|.+|+..
T Consensus         3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G-------~~G~~Ce~~   41 (553)
T 1q4g_A            3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTG-------YSGPNCTIP   41 (553)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSS-------EETTTTCEE
T ss_pred             CcCCCCCCCCCCCcCCCCCCceEeeCCCCC-------cCCCCCCCC
Confidence            46999999998  976 3  4999999 88       489999875

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=94.53  E-value=0.082  Score=39.13  Aligned_cols=24  Identities=29%  Similarity=0.953  Sum_probs=18.8

Q ss_pred             ceEecCCCCCCCeEEeCCCCCcC---CCCCC
Q psy6902          59 GRCTQTFQDRTGYKCRCSGTGYY---GKKCQ   86 (86)
Q Consensus        59 g~C~~~~~~~~~~~C~C~~~g~~---G~~Ce   86 (86)
                      .+|++..   ++|.|.|+ +||.   |+.|+
T Consensus       306 ~~C~~~~---~~~~C~C~-~G~~~~~~~~C~  332 (699)
T 1n7d_A          306 HVCNDLK---IGYECLCP-DGFQLVAQRRCE  332 (699)
T ss_dssp             TTCCCCT---TCCCCCCC-SSSCCCSSSCCC
T ss_pred             CCcccCC---CCcEEeCC-CCeEcCCCCccc
Confidence            4788764   58999999 8998   66664

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=94.20  E-value=0.011  Score=32.82  Aligned_cols=32  Identities=28%  Similarity=0.699  Sum_probs=24.1

Q ss_pred             CCCC---CCCCCCC-Cee----CCccCCCCCCccCCccccccccccc
Q psy6902           2 SACD---PAHVRPG-CRI----QDNQCICGKGCYPEYKFITQEECMT   40 (86)
Q Consensus         2 ~~C~---~~~c~~g-C~~----~~~~C~c~~~c~~~~~~~~g~~C~~   40 (86)
                      ..|.   .++|+|| |..    ..+.|.|+.+       |+|.+|+.
T Consensus        38 ~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~G-------YtG~RCE~   77 (79)
T 1xdt_R           38 DPCLRKYKDFCIHGECKYVKELRAPSCICHPG-------YHGERCHG   77 (79)
T ss_dssp             -CTTTTTTTCCSSEEECCBGGGTBCCEEECTT-------EESTTCCE
T ss_pred             CCCCccccCcCCCCEeeeecCCCCeEEEcCCC-------cccccccc
Confidence            3577   7899999 842    2388999988       48899974

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=94.04  E-value=0.034  Score=33.84  Aligned_cols=28  Identities=21%  Similarity=0.523  Sum_probs=21.7

Q ss_pred             CCCCCC--CeeC----Cc-cCCCCCCccCCcccccccccccc
Q psy6902           7 AHVRPG--CRIQ----DN-QCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         7 ~~c~~g--C~~~----~~-~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      .||+||  |...    .+ .|.|+.+    |   +|.+|++.
T Consensus        13 cpC~NGGtC~~~~~~s~~~~C~Cp~g----~---~G~~Cei~   47 (145)
T 2i9a_A           13 CDCLNGGTCVSNKYFSNIHWCNCPKK----F---GGQHCEID   47 (145)
T ss_dssp             CCCCTTCEEEECSSSTTCEEEECCTT----E---ESTTSCEE
T ss_pred             CCCCCCCCcCCCccccCCccccCCCC----C---CCCceecc
Confidence            499998  8653    35 7999999    4   78999876

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*

Probab=93.69  E-value=0.047  Score=41.86  Aligned_cols=36  Identities=36%  Similarity=0.839  Sum_probs=30.1

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|.-+||+|+++++...   ....|.|+ ++|.|..||
T Consensus       497 ~~~c~C~PC~ngg~~~l~g---~~C~C~C~-~g~~G~~Ce  532 (913)
T 3t5o_A          497 FDPCQCAPCPNNGRPTLSG---TECLCVCQ-SGTYGENCE  532 (913)
T ss_dssp             TCGGGSCCBTTTBEEEEET---TEEEEECC-TTBCSTTSC
T ss_pred             cccccCCCCCCCCEeecCC---CceEEEcc-CCccccCcc
Confidence            4667777999999999753   37899999 899999886

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=90.47  E-value=0.14  Score=30.68  Aligned_cols=33  Identities=36%  Similarity=0.936  Sum_probs=24.7

Q ss_pred             cccCCC---CCCcCCceEecCCCCCCCeEEeCCCCCcC----CCCC
Q psy6902          47 QNACDT---NPCYHGGRCTQTFQDRTGYKCRCSGTGYY----GKKC   85 (86)
Q Consensus        47 ~~~C~~---~PC~ngg~C~~~~~~~~~~~C~C~~~g~~----G~~C   85 (86)
                      +|+|..   .+|.  ..|.+..   ++|.|.|. +||+    |+.|
T Consensus       117 ~~eC~~~~~~~C~--~~C~n~~---g~~~C~C~-~Gy~l~~~~~~C  156 (159)
T 1nzi_A          117 INECTDFVDVPCS--HFCNNFI---GGYFCSCP-PEYFLHDDMKNC  156 (159)
T ss_dssp             CCTTTC-CCCCSS--SEEEEET---TEEEEECC-TTCEECTTSSCE
T ss_pred             CcccCCCCCCCCC--CcccCcC---CCEEEecC-CCcEECCCCCcc
Confidence            678875   3565  4798874   48999999 8998    5555

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=90.03  E-value=0.18  Score=32.13  Aligned_cols=27  Identities=26%  Similarity=0.682  Sum_probs=20.7

Q ss_pred             CCCCCC--CeeCCccCCCCCCccCCcccccccccccc
Q psy6902           7 AHVRPG--CRIQDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         7 ~~c~~g--C~~~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      .+|+||  |.. +..|.|++|    |   +|.+|+..
T Consensus       153 ~~C~ngG~Cv~-P~~C~C~~G----w---~G~~C~~~  181 (188)
T 2ygo_A          153 GGCRNGGFCNE-RRICECPDG----F---HGPHCEGT  181 (188)
T ss_dssp             TCCCTTCEECT-TSCEECCTT----C---BTTTTCBC
T ss_pred             CCCCCCCEeCC-CCcccCcCC----C---CCCCCcCC
Confidence            567776  543 689999999    6   89999864

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=89.95  E-value=0.21  Score=26.56  Aligned_cols=29  Identities=31%  Similarity=0.723  Sum_probs=21.4

Q ss_pred             cccCCCC--CCcCCceEecCCCCCC-CeEEeCCCCCcC
Q psy6902          47 QNACDTN--PCYHGGRCTQTFQDRT-GYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~--PC~ngg~C~~~~~~~~-~~~C~C~~~g~~   81 (86)
                      +|+|..+  .|.+  .|++..   + +|.|.|+ +||.
T Consensus         5 ~~eC~~~nggC~h--~C~n~~---g~s~~C~C~-~Gy~   36 (69)
T 1kli_L            5 QLICVNENGGCEQ--YCSDHT---GTKRSCRCH-EGYS   36 (69)
T ss_dssp             CCCTTSGGGGCSS--EEEEET---TTEEEEECC-TTEE
T ss_pred             cccccCCCCCcCC--EeEcCC---CCCEEEeCC-CCCe
Confidence            6778653  4654  688864   4 6999999 8995

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=89.20  E-value=0.077  Score=26.47  Aligned_cols=18  Identities=28%  Similarity=0.846  Sum_probs=12.2

Q ss_pred             eEecCCCCCCCeEEeCCCCCcC
Q psy6902          60 RCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        60 ~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      .|++..   ++|+|.|+ +||.
T Consensus        11 ~C~n~~---gs~~C~C~-~Gy~   28 (51)
T 1kig_L           11 FCREER---SEVRCSCA-HGYV   28 (51)
T ss_dssp             CCCEET---TEECCCCC-TTEE
T ss_pred             EeEcCC---CCeEEeCC-CCcE
Confidence            466653   47888888 7875

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=87.65  E-value=0.26  Score=33.99  Aligned_cols=33  Identities=15%  Similarity=0.438  Sum_probs=25.4

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCC-CccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGK-GCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~-~c~~~~~~~~g~~C~~~   41 (86)
                      ..|..+||++|  |..  ..|.|.|+. +       |+|..|+..
T Consensus       186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~-------~~G~~C~~~  223 (410)
T 3asi_A          186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTS-------FSGPLCNDP  223 (410)
T ss_dssp             SCCCTTSSSTTCEEEECSSSEEEECTTTS-------EESTTSCEE
T ss_pred             CCcccccCCCCCEecCCCCCceEeccCCc-------ccCCCCCCC
Confidence            36889999998  875  459999986 5       478888753

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=85.47  E-value=0.29  Score=34.76  Aligned_cols=45  Identities=24%  Similarity=0.521  Sum_probs=0.0

Q ss_pred             CeeCCccCCCCCCccCCcccccccccccccCCcccccCCCCCCcCCceEecC
Q psy6902          13 CRIQDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCYHGGRCTQT   64 (86)
Q Consensus        13 C~~~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~ngg~C~~~   64 (86)
                      |....++|.....|++..   . +.|..+|+|..   |...+|.++|+|.+.
T Consensus       366 CD~~t~~C~ngg~C~~~~---~-C~C~~G~~G~~---Ce~c~C~~~g~C~~~  410 (426)
T 3zyj_B          366 CDNELLHCQNGGTCHNNV---R-CLCPAAYTGIL---CEKLRCEEAGSCGSD  410 (426)
T ss_dssp             ----------------------------------------------------
T ss_pred             cccCcccCCCCCCcCCCC---C-CcCCCCCcCCC---CcCCCCCCCCcccCC
Confidence            544445666555565533   3 67777776543   777789999999875

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=84.54  E-value=0.39  Score=24.00  Aligned_cols=18  Identities=33%  Similarity=0.844  Sum_probs=14.1

Q ss_pred             eEecCCCCCC-CeEEeCCCCCcC
Q psy6902          60 RCTQTFQDRT-GYKCRCSGTGYY   81 (86)
Q Consensus        60 ~C~~~~~~~~-~~~C~C~~~g~~   81 (86)
                      .|++..   + +|+|.|+ +||.
T Consensus        12 ~C~n~~---ggs~~C~C~-~Gy~   30 (53)
T 2bz6_L           12 YCSDHT---GTKRSCRCH-EGYS   30 (53)
T ss_dssp             EEEEET---TTEEEEECC-TTEE
T ss_pred             EeEcCC---CCCEEeeCC-CCCE
Confidence            588763   4 5999999 8996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	86
d1q4ga2	42	g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EG	2e-05
d1cvua2	41	g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EG	2e-05
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	0.004
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	0.004

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 36.0 bits (83), Expect = 2e-05
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
          N C   PC H G C +   D   Y+C C+ TGY G  C 
Sbjct: 3  NPCCYYPCQHQGICVRFGLD--RYQCDCTRTGYSGPNCT 39

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 2e-05
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
          N C +NPC + G C  T  D   YKC C+ TG+YG+ C 
Sbjct: 2  NPCCSNPCQNRGECMSTGFD--QYKCDCTRTGFYGENCT 38

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.0 bits (68), Expect = 0.004
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
          + C++NPC +GG C         Y+C C   G+ GK C+
Sbjct: 4  DQCESNPCLNGGSCKDDIN---SYECWCP-FGFEGKNCE 38

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.0 bits (68), Expect = 0.004
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ 86
          N C +NPC +   C         ++C C   GY G  C+
Sbjct: 2  NECVSNPCQNDATCLDQIG---EFQCICM-PGYEGVHCE 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	86
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	99.5
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	99.47
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	99.47
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	99.47
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	99.42
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	99.34
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	99.33
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	99.32
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	99.32
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	99.28
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	99.2
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	99.15
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	99.04
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	98.99
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	98.94
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	98.33
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	98.31
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.18
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	98.13
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.1
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.06
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.06
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.02
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.01
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.98
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	97.95
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.87
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.85
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.8
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.76
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.71
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.7
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.69
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.57
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	97.48
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.43
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.37
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	97.24
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.2
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.12
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.11
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.03
d1szba2	45	Mannose-binding protein associated serine protease	96.83
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.81
d1nt0a3	45	Mannose-binding protein associated serine protease	96.77
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.5
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	96.39
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	96.09
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	96.05
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.3
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	94.91
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	92.74
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	92.4
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	91.82
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	85.31
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	80.9

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.2e-14  Score=70.52  Aligned_cols=36  Identities=33%  Similarity=0.941  Sum_probs=33.3

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ||+|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         1 Id~C~~~PC~n~g~C~~~~---~~y~C~C~-~G~~G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQI---GEFQCICM-PGYEGVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECS---SCEEEECC-TTEESSSSC
T ss_pred             CcCCcCCCCCCCCEEECCC---CCEEEeCC-CCCccCcCe
Confidence            6899999999999999875   49999999 999999997

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.47  E-value=9.9e-15  Score=70.12  Aligned_cols=36  Identities=31%  Similarity=1.025  Sum_probs=33.5

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         2 ~d~C~~~PC~ngg~C~~~~---~~y~C~C~-~g~~G~~Ce   37 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQL---QSYICFCL-PAFEGRNCE   37 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEET---TEEEEECC-TTEESTTSC
T ss_pred             cccCCCCCCCCCCEEECCC---CCeEEECC-CCCcCCCCC
Confidence            7899999999999999875   48999999 899999997

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3e-14  Score=67.61  Aligned_cols=35  Identities=40%  Similarity=1.203  Sum_probs=32.3

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      |+|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         1 d~C~~~PC~ngg~C~~~~---~~y~C~C~-~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKI---NEFQCECP-TGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECS---SCEEEECC-TTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCC---CCeEEECC-CCCCCCCcC
Confidence            689999999999999875   48999999 899999997

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.5e-14  Score=69.41  Aligned_cols=36  Identities=39%  Similarity=1.198  Sum_probs=33.5

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +|+|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         3 ~d~C~~~PC~ngg~C~~~~---~~y~C~C~-~g~~G~~Ce   38 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDI---NSYECWCP-FGFEGKNCE   38 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEET---TEEEEECC-TTCCSTTSC
T ss_pred             cccCCCCCCCCCcEEEcCC---CCEEEECC-CCCCCCCCC
Confidence            7899999999999999875   49999999 899999997

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.8e-14  Score=68.06  Aligned_cols=35  Identities=37%  Similarity=1.135  Sum_probs=32.2

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      |+|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         1 D~C~~~PC~ngg~C~~~~---~~y~C~C~-~G~~G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGL---GEYTCTCL-EGFEGKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCS---SSCCEECC-TTEETTTTC
T ss_pred             CcCCCCCCCCCcEEECCC---CCEEEECC-CCCCcCcCe
Confidence            689999999999999875   48999999 999999997

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=6.4e-13  Score=65.28  Aligned_cols=36  Identities=39%  Similarity=1.182  Sum_probs=32.6

Q ss_pred             cccCC--CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACD--TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~--~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ||+|.  ++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         3 ideC~~~~~pC~n~g~C~n~~---g~y~C~C~-~G~~G~~Ce   40 (42)
T d2vj3a1           3 VDECSLGANPCEHAGKCINTL---GSFECQCL-QGYTGPRCE   40 (42)
T ss_dssp             CCTTTSSSCSSSTTCEEEECS---SSEEEECC-TTEESTTSC
T ss_pred             CccccCCCCCCCCCcEeECCC---CCEEeECC-CCCcCCCCc
Confidence            78887  68999999999985   48999999 999999996

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.1e-13  Score=66.04  Aligned_cols=35  Identities=37%  Similarity=1.059  Sum_probs=32.2

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ++|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         2 ~~C~~~pC~ngg~C~~~~---~~~~C~C~-~g~~G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETI---NNYTCKCD-PGFSGLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEET---TEEEEEEC-TTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCC---CCEEEeCC-CCCcCcCcC
Confidence            679999999999999875   48999999 899999997

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.3e-13  Score=65.29  Aligned_cols=35  Identities=34%  Similarity=1.057  Sum_probs=32.2

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +.|.++||+|+|+|++..   ++|+|.|+ +||+|++||
T Consensus         2 ~~C~~~pC~ngg~C~~~~---~~y~C~C~-~g~~G~~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETI---GNYTCSCY-PGFYGPECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECS---SSEEEEEC-TTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCC---CCeEEeCC-CCccCCCCC
Confidence            679999999999999885   48999999 899999997

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=9.2e-13  Score=64.39  Aligned_cols=35  Identities=34%  Similarity=1.096  Sum_probs=30.3

Q ss_pred             CCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        50 C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      |.++||+|||+|++... ..+|+|.|+ +||+|++||
T Consensus         1 C~~nPC~ngG~C~~~~~-~~~y~C~C~-~g~~G~~Ce   35 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALY-FSDFVCQCP-EGFAGKSCE   35 (41)
T ss_dssp             CSSCCSCTTCEEEEESS-SSCEEEECC-TTCBSSSCC
T ss_pred             CcCCCCCCCCEEecCCC-CCCeEECCC-CCCCCCCcC
Confidence            67899999999997642 348999999 899999997

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.28  E-value=8.6e-13  Score=64.80  Aligned_cols=37  Identities=38%  Similarity=0.906  Sum_probs=32.1

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCC-CcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGT-GYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~-g~~G~~Ce   86 (86)
                      +|+|.++||+|+|+|++..  .++|+|.|+ . ||+|++||
T Consensus         2 id~C~~nPC~ngG~C~~~~--~~~y~C~C~-~~G~~G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFG--LDRYQCDCT-RTGYSGPNCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEET--TTEEEEECT-TSSEETTTTC
T ss_pred             CccCcCCCCCCCCEeeeCC--CCCEEEECC-CCCcCCcCcC
Confidence            6899999999999998642  248999998 5 89999997

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=5.1e-12  Score=61.65  Aligned_cols=37  Identities=46%  Similarity=1.105  Sum_probs=31.2

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      |+|.++||+|+|+|++..  .++|+|.|+.+||+|++||
T Consensus         2 d~C~~~PC~ngG~C~~~~--~~~y~C~C~~~gy~G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTG--FDQYKCDCTRTGFYGENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEE--TTEEEEECTTSSEETTTTC
T ss_pred             CcCcCCCCCCCCEEEECC--CCCEEEeCcCCCcCCcCcC
Confidence            689999999999998753  2489999962599999997

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1e-11  Score=62.46  Aligned_cols=35  Identities=31%  Similarity=0.934  Sum_probs=31.7

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +++|.++||+| |+|++..   ++|+|.|+ +||+|++||
T Consensus         8 ~~~C~~~PC~n-G~C~~~~---~~y~C~C~-~G~~G~~Ce   42 (48)
T d1autl1           8 EHPCASLCCGH-GTCIDGI---GSFSCDCR-SGWEGRFCQ   42 (48)
T ss_dssp             CCSSSSTTTTS-EEECCCS---SCCCEEEC-TTEESTTSC
T ss_pred             CCcccCCCCCC-CEEECCC---CCCeEeCC-CCCcCCCcc
Confidence            68999999999 7999875   48999999 899999996

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=1.4e-10  Score=59.37  Aligned_cols=37  Identities=32%  Similarity=0.818  Sum_probs=31.1

Q ss_pred             ccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          48 NACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        48 ~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ++|.++||+|||+|+.... ...|+|.|+ +||+|++||
T Consensus         7 ~~c~~~~C~NgG~C~~~~~-~~~~~C~C~-~gy~G~~Ce   43 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIES-LDSYTCNCV-IGYSGDRCQ   43 (53)
T ss_dssp             CTTSSCCSCSSCEEEEESS-SSCEEEECC-TTCCSSSSC
T ss_pred             CCCCCCCCCCCcEeeccCC-CCCeEeECC-CCCcCCCCc
Confidence            5678899999999985432 348999999 899999997

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1e-10  Score=58.73  Aligned_cols=38  Identities=32%  Similarity=0.744  Sum_probs=31.5

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|..+||+|||+|+.... ..+|+|.|+ .||+|.+||
T Consensus         4 C~~c~~~~C~ngG~C~~~~~-~~~~~C~C~-~gy~G~~Ce   41 (48)
T d1nqlb_           4 CPLSHDGYCLHDGVCMYIEA-LDKYACNCV-VGYIGERCQ   41 (48)
T ss_dssp             CCSTTCCEECTTCEEEEETT-TTEEEEEEC-TTEESTTSC
T ss_pred             CCCCCCCCCCCCcEEeeeCC-CCCeEEeCC-CCcccCCCC
Confidence            45688899999999986432 347999999 899999997

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.1e-10  Score=61.63  Aligned_cols=39  Identities=26%  Similarity=0.798  Sum_probs=31.5

Q ss_pred             cccCCCCCCcCCceEecC--CCCCCCeEEeCCCCCcCCCCCC
Q psy6902          47 QNACDTNPCYHGGRCTQT--FQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~--~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|.++||+|||+|...  ....++|.|.|+ +||+|.+||
T Consensus         6 c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~-~gy~G~~Ce   46 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQ-PGFTGARCT   46 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECC-TTEESTTSC
T ss_pred             CCCCcCCcCCCCCEEeecccccCCCCEEeECC-CCCCCCCcC
Confidence            577889999999999632  111358999999 899999996

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2.3e-07  Score=45.67  Aligned_cols=34  Identities=32%  Similarity=0.809  Sum_probs=25.5

Q ss_pred             CCCCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          50 CDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        50 C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +..++|+| |.|..... ...++|.|+ +||+|.+||
T Consensus         9 ~~~~yC~n-G~C~~~~~-~~~~~C~C~-~gY~G~RCe   42 (46)
T d1k36a_           9 DMNGYCLH-GQCIYLVD-MSQNYCRCE-VGYTGVRCE   42 (46)
T ss_dssp             TCCSSCSS-EEEEEETT-TTEEEEEEC-TTCSSTTSC
T ss_pred             cCCCcCcC-CEEEEeCC-CCccEeECC-CCceecCce
Confidence            34579999 56753221 347999999 899999997

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2.4e-07  Score=46.36  Aligned_cols=32  Identities=25%  Similarity=0.608  Sum_probs=26.9

Q ss_pred             CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          52 TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        52 ~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .++|+||+.|....  ...++|.|+ .||+|.+||
T Consensus        13 ~~yC~nGgcc~~~~--~~~~~C~C~-~gy~G~rCe   44 (50)
T d1ioxa_          13 KHYCIKGRCRFVVA--EQTPSCVCD-EGYIGARCE   44 (50)
T ss_dssp             TTSCTTCCEEEETT--TTEEEECCC-TTEETTTTC
T ss_pred             CCCccCCeEEEeCC--CCCcEeECC-CCCeeCCCc
Confidence            57899999997543  347999999 899999997

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.4e-07  Score=43.98  Aligned_cols=31  Identities=26%  Similarity=0.734  Sum_probs=26.3

Q ss_pred             CCCCCCCCC--Cee----CCccCCCCCCccCCcccccccccccc
Q psy6902           4 CDPAHVRPG--CRI----QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         4 C~~~~c~~g--C~~----~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      |.++||+||  |..    ..|.|.|+.+    |   +|.+|+.+
T Consensus         1 C~~nPC~ngG~C~~~~~~~~y~C~C~~g----~---~G~~Ce~~   37 (41)
T d1tpga1           1 CSEPRCFNGGTCQQALYFSDFVCQCPEG----F---AGKSCEID   37 (41)
T ss_dssp             CSSCCSCTTCEEEEESSSSCEEEECCTT----C---BSSSCCBC
T ss_pred             CcCCCCCCCCEEecCCCCCCeEECCCCC----C---CCCCcCcC
Confidence            789999999  874    2489999999    4   89999977

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=8.2e-07  Score=44.16  Aligned_cols=32  Identities=31%  Similarity=0.731  Sum_probs=26.3

Q ss_pred             CCCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          52 TNPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        52 ~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .+.|+||+.|....  ...++|.|+ +||+|.+||
T Consensus        12 ~~yClnGgcc~~~~--~~~~~C~C~-~gy~G~RCe   43 (49)
T d1moxc_          12 TQFCFHGTCRFLVQ--EDKPACVCH-SGYVGARCE   43 (49)
T ss_dssp             SCSSTTEEEEEETT--TTEEEEEEC-TTEESTTSC
T ss_pred             CCEeeCCeEEecCC--CCCcEeECC-CCCEecCCc
Confidence            46899999886543  347999999 899999997

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=5.6e-07  Score=43.59  Aligned_cols=36  Identities=31%  Similarity=0.859  Sum_probs=29.4

Q ss_pred             ccccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcC--CCCC
Q psy6902          46 RQNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYY--GKKC   85 (86)
Q Consensus        46 ~~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~--G~~C   85 (86)
                      ++|||...++...++|++..   ++|.|.|+ +||+  |..|
T Consensus         4 DidEC~~~~~~~~~~C~Nt~---Gsy~C~C~-~Gy~~~g~~C   41 (43)
T d1emoa1           4 DMDECKEPDVCKHGQCINTD---GSYRCECP-FGYILAGNEC   41 (43)
T ss_dssp             CCCSSSSTTSCSSSCCCCCS---SCCCCCCC-TTEEESSSCE
T ss_pred             ceeccCCcCCCCCCEeECCC---CCeEeECC-CCcccCCCcc
Confidence            38999887777778999985   59999999 8997  5554

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=7.3e-07  Score=42.34  Aligned_cols=33  Identities=27%  Similarity=0.606  Sum_probs=27.8

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      +.|.++||+||  |+.  ..|.|.|+++    |   +|.+|+.+
T Consensus         2 d~C~~~PC~n~g~C~~~~~~y~C~C~~G----~---~G~~Ce~d   38 (39)
T d2vj3a2           2 NECVSNPCQNDATCLDQIGEFQCICMPG----Y---EGVHCEVN   38 (39)
T ss_dssp             CTTTTCCCCSSCEEEECSSCEEEECCTT----E---ESSSSCEE
T ss_pred             cCCcCCCCCCCCEEECCCCCEEEeCCCC----C---ccCcCeeC
Confidence            57999999999  875  4599999999    5   89999854

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=8.6e-07  Score=42.09  Aligned_cols=33  Identities=18%  Similarity=0.634  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      ++|.++||+||  |..  ..|.|.|+++    |   +|.+|+..
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G----~---~G~~Cei~   37 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEG----F---EGKNCELF   37 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTT----E---ETTTTCEE
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCC----C---CcCcCeEc
Confidence            47999999998  865  4599999999    4   88999864

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.3e-06  Score=40.53  Aligned_cols=31  Identities=26%  Similarity=0.622  Sum_probs=25.7

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECM   39 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~   39 (86)
                      +.|.++||+||  |..  ..|.|.|+.+    |   +|.+||
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g----~---~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTG----F---TGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTT----E---ESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCC----C---CCCCcC
Confidence            47999999998  875  4599999998    4   888885

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.1e-06  Score=41.64  Aligned_cols=32  Identities=22%  Similarity=0.689  Sum_probs=26.6

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMT   40 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~   40 (86)
                      +.|.++||+||  |..  ..|.|.|+++    |   +|.+|+.
T Consensus         4 d~C~~~PC~ngg~C~~~~~~y~C~C~~g----~---~G~~Cei   39 (39)
T d1edmb_           4 DQCESNPCLNGGSCKDDINSYECWCPFG----F---EGKNCEL   39 (39)
T ss_dssp             CTTTTCCCCTTCEEEEETTEEEEECCTT----C---CSTTSCC
T ss_pred             ccCCCCCCCCCcEEEcCCCCEEEECCCC----C---CCCCCCC
Confidence            57999999998  875  3499999999    4   8898873

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=7.6e-07  Score=44.11  Aligned_cols=33  Identities=21%  Similarity=0.509  Sum_probs=28.0

Q ss_pred             CCCCCCCCCCC-Cee--CCccCCCCCCccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG-CRI--QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g-C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      +.|.++||+|| |..  ..|.|.|+.+    |   +|.+|+..
T Consensus         9 ~~C~~~PC~nG~C~~~~~~y~C~C~~G----~---~G~~Ce~~   44 (48)
T d1autl1           9 HPCASLCCGHGTCIDGIGSFSCDCRSG----W---EGRFCQRE   44 (48)
T ss_dssp             CSSSSTTTTSEEECCCSSCCCEEECTT----E---ESTTSCEE
T ss_pred             CcccCCCCCCCEEECCCCCCeEeCCCC----C---cCCCcccc
Confidence            57999999999 764  4599999999    5   89999876

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=6.2e-06  Score=38.29  Aligned_cols=32  Identities=25%  Similarity=0.662  Sum_probs=24.4

Q ss_pred             CCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      -|+|||+|+.-..-.+-..|.|| .+|.|.+||
T Consensus         3 ~ClNGG~Cvsyk~FS~I~rC~CP-k~f~G~HCE   34 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSNIHWCNCP-KKFGGQHCE   34 (40)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECC-TTEESTTSC
T ss_pred             ccccCCEEEEEehhcCCEEecCC-cccCceeEE
Confidence            38999999964321224579999 899999997

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.87  E-value=1.1e-06  Score=41.19  Aligned_cols=31  Identities=23%  Similarity=0.685  Sum_probs=25.7

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECM   39 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~   39 (86)
                      ++|.++||+||  |+.  ..|.|.|+++    |   +|.+||
T Consensus         3 d~C~~~PC~ngg~C~~~~~~y~C~C~~g----~---~G~~Ce   37 (37)
T d2c4fl1           3 DQCASSPCQNGGSCKDQLQSYICFCLPA----F---EGRNCE   37 (37)
T ss_dssp             CGGGGCCCCTTCEEEEETTEEEEECCTT----E---ESTTSC
T ss_pred             ccCCCCCCCCCCEEECCCCCeEEECCCC----C---cCCCCC
Confidence            57999999999  875  4599999999    4   888885

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=3.6e-06  Score=40.86  Aligned_cols=32  Identities=28%  Similarity=0.823  Sum_probs=25.7

Q ss_pred             cccCCCC--CCcCCceEecCCCCCCCeEEeCCCCCcCCC
Q psy6902          47 QNACDTN--PCYHGGRCTQTFQDRTGYKCRCSGTGYYGK   83 (86)
Q Consensus        47 ~~~C~~~--PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~   83 (86)
                      ||||...  +|.+ ++|+++.   ++|.|.|+ +||.+.
T Consensus         3 idEC~~~~~~C~~-~~C~Nt~---Gsy~C~C~-~Gy~~~   36 (44)
T d1lmja1           3 IDECRISPDLCGR-GQCVNTP---GDFECKCD-EGYESG   36 (44)
T ss_dssp             CCTTTTCSSTTTT-SCEEEET---TEEEECCC-SSEEEC
T ss_pred             ccccCCCCCCCCC-CEeEcCC---CCeEEeCC-CCCccC
Confidence            8999764  4764 7899985   59999999 899753

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.85  E-value=1.9e-06  Score=41.24  Aligned_cols=33  Identities=24%  Similarity=0.606  Sum_probs=26.6

Q ss_pred             CCCCCCCCCCCC--Cee---CCccCCCC-CCccCCccccccccccc
Q psy6902           1 SSACDPAHVRPG--CRI---QDNQCICG-KGCYPEYKFITQEECMT   40 (86)
Q Consensus         1 ~~~C~~~~c~~g--C~~---~~~~C~c~-~~c~~~~~~~~g~~C~~   40 (86)
                      +++|.++||+||  |+.   ..|.|.|+ .+       |+|.+|+.
T Consensus         1 ad~C~~~PC~ngG~C~~~~~~~y~C~C~~~g-------y~G~~Ce~   39 (41)
T d1cvua2           1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTG-------FYGENCTT   39 (41)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSS-------EETTTTCE
T ss_pred             CCcCcCCCCCCCCEEEECCCCCEEEeCcCCC-------cCCcCcCc
Confidence            578999999998  964   24999997 47       38899975

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=2.7e-06  Score=41.08  Aligned_cols=30  Identities=43%  Similarity=1.163  Sum_probs=24.0

Q ss_pred             cccCCCC--CCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTN--PCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~--PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||+|...  +|.+ ++|+++.   ++|.|.|+ +||+
T Consensus         3 inEC~~~~~~c~~-~~C~Nt~---Gsy~C~C~-~Gy~   34 (43)
T d1uzka2           3 IDECQELPGLCQG-GKCINTF---GSFQCRCP-TGYY   34 (43)
T ss_dssp             CCHHHHCGGGGBT-SEEEECS---SCEEEECC-TTCC
T ss_pred             cccccCCCCCcCC-CEEECCC---CCeEeECC-CCCe
Confidence            7888654  4765 5899985   59999999 8996

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.4e-06  Score=41.33  Aligned_cols=33  Identities=21%  Similarity=0.599  Sum_probs=27.5

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCcccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      ++|.++||+||  |..  ..|.|.|+++    |   +|.+|+..
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g----~---~G~~Ce~~   38 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPG----F---SGLKCEQI   38 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTT----E---ESTTSCEE
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCC----C---cCcCcCcc
Confidence            57999999998  875  3499999999    4   88999854

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=2.8e-06  Score=40.43  Aligned_cols=32  Identities=22%  Similarity=0.560  Sum_probs=26.9

Q ss_pred             CCCCCCCCCCC--Cee--CCccCCCCCCccCCccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMT   40 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~   40 (86)
                      ++|.++||+||  |..  ..|.|.|+++    |   +|.+|+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g----~---~G~~Ce~   37 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPG----F---YGPECEY   37 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTT----E---ESTTSCE
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCC----c---cCCCCCC
Confidence            47999999998  875  4599999999    4   8899975

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=5.2e-06  Score=39.81  Aligned_cols=30  Identities=37%  Similarity=1.000  Sum_probs=23.8

Q ss_pred             cccCCCCC--CcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTNP--CYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~P--C~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||||..+|  |. .++|+++.   ++|.|.|+ +||+
T Consensus         2 idEC~~~~~~C~-~~~C~Nt~---Gsy~C~C~-~Gy~   33 (42)
T d1lmja2           2 IDECQRDPLLCR-GGVCHNTE---GSYRCECP-PGHQ   33 (42)
T ss_dssp             CCHHHHCSSTTT-TSEEEEET---TEEEEESC-TTSC
T ss_pred             ccccCCCCCCCC-CCEeECCC---CCeEEeCC-CCCe
Confidence            67886544  75 46999985   59999999 8997

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1e-05  Score=38.93  Aligned_cols=31  Identities=26%  Similarity=0.589  Sum_probs=23.9

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||||+..+.--.+.|++..   ++|.|.|+ +||.
T Consensus         3 idEC~~~~~~c~~~C~Nt~---G~y~C~C~-~Gy~   33 (43)
T d1uzka1           3 VNECLDPTTCISGNCVNTP---GSYICDCP-PDFE   33 (43)
T ss_dssp             CCGGGSTTSSBTSEEEEET---TEEEEECC-TTCE
T ss_pred             ccccCCCCcCcCCEeECCC---CCEEEecC-CCCE
Confidence            8899764422357999985   59999999 8994

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.57  E-value=5.1e-06  Score=39.87  Aligned_cols=32  Identities=22%  Similarity=0.515  Sum_probs=25.7

Q ss_pred             CCCCCCCCCCC--Cee---CCccCCCCC-CccCCccccccccccc
Q psy6902           2 SACDPAHVRPG--CRI---QDNQCICGK-GCYPEYKFITQEECMT   40 (86)
Q Consensus         2 ~~C~~~~c~~g--C~~---~~~~C~c~~-~c~~~~~~~~g~~C~~   40 (86)
                      +.|.++||+||  |..   ..|.|.|+. +       |+|.+|+.
T Consensus         3 d~C~~nPC~ngG~C~~~~~~~y~C~C~~~G-------~~G~~Ce~   40 (42)
T d1q4ga2           3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTG-------YSGPNCTI   40 (42)
T ss_dssp             CGGGGCCCCTTCEEEEETTTEEEEECTTSS-------EETTTTCE
T ss_pred             ccCcCCCCCCCCEeeeCCCCCEEEECCCCC-------cCCcCcCc
Confidence            57999999998  964   239999986 7       38899975

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=2e-05  Score=37.53  Aligned_cols=31  Identities=32%  Similarity=0.876  Sum_probs=24.7

Q ss_pred             CCCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          53 NPCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        53 ~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      +-|.| |+|.-... ...+.|.|+ .||+|.+|+
T Consensus         8 ~yCih-G~C~~i~~-l~~~~C~C~-~gY~G~RCq   38 (41)
T d1xdtr_           8 DFCIH-GECKYVKE-LRAPSCICH-PGYHGERCH   38 (41)
T ss_dssp             TCCSS-EEECCBGG-GTBCCEEEC-TTEESTTCC
T ss_pred             CEeEC-cEEeecCc-CCCceeECC-CCCeecCcc
Confidence            45888 99975433 347899999 899999996

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4.6e-05  Score=36.15  Aligned_cols=29  Identities=31%  Similarity=0.938  Sum_probs=22.7

Q ss_pred             cccCCC-CCCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||+|.. ++|.+  .|++..   ++|.|.|+ +||+
T Consensus         1 idEC~~~~~C~~--~C~n~~---Gsy~C~C~-~Gy~   30 (41)
T d1i0ua2           1 IDECQDPDTCSQ--LCVNLE---GGYKCQCE-EGFQ   30 (41)
T ss_dssp             CCTTTTTTSCSS--CEECSS---SCCEECCC-TTEE
T ss_pred             CccCCCCCCCCC--EeECCC---CCEEeECC-CCCe
Confidence            577854 47764  799985   59999999 8997

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=1.1e-05  Score=41.79  Aligned_cols=42  Identities=19%  Similarity=0.353  Sum_probs=31.2

Q ss_pred             CCCCCCCCCC--Cee-------CCccCCCCCCccCCcccccccccccccCCcccccCCCCCCc
Q psy6902           3 ACDPAHVRPG--CRI-------QDNQCICGKGCYPEYKFITQEECMTALKGKRQNACDTNPCY   56 (86)
Q Consensus         3 ~C~~~~c~~g--C~~-------~~~~C~c~~~c~~~~~~~~g~~C~~~~~~~~~~~C~~~PC~   56 (86)
                      +|+++||+||  |..       ..|.|.|+.+    |   +|.+|+..     +......+..
T Consensus         8 ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~g----y---~G~~Ce~~-----~~~~~~~~~~   58 (63)
T d1haea_           8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG----F---TGARCTEN-----VPMKVQNQEK   58 (63)
T ss_dssp             HHHHTTSCTTCEEEEEESSSSSCCEEEECCTT----E---ESTTSCEE-----CCSSCTTCTT
T ss_pred             CCcCCcCCCCCEEeecccccCCCCEEeECCCC----C---CCCCcCCC-----CCccccCCcc
Confidence            4678999997  852       2489999999    4   89999977     6666555543

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=5.8e-05  Score=35.91  Aligned_cols=31  Identities=26%  Similarity=0.624  Sum_probs=24.2

Q ss_pred             CCC--CCCCCCC--Cee--CCccCCCCCCccCCccccccccccc
Q psy6902           3 ACD--PAHVRPG--CRI--QDNQCICGKGCYPEYKFITQEECMT   40 (86)
Q Consensus         3 ~C~--~~~c~~g--C~~--~~~~C~c~~~c~~~~~~~~g~~C~~   40 (86)
                      .|.  ++||+++  |..  ..|.|.|+++    |   +|.+|+.
T Consensus         5 eC~~~~~pC~n~g~C~n~~g~y~C~C~~G----~---~G~~Ce~   41 (42)
T d2vj3a1           5 ECSLGANPCEHAGKCINTLGSFECQCLQG----Y---TGPRCEI   41 (42)
T ss_dssp             TTTSSSCSSSTTCEEEECSSSEEEECCTT----E---ESTTSCE
T ss_pred             cccCCCCCCCCCcEeECCCCCEEeECCCC----C---cCCCCcC
Confidence            454  7899988  875  4599999999    4   8888874

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00012  Score=36.39  Aligned_cols=31  Identities=26%  Similarity=0.634  Sum_probs=22.2

Q ss_pred             cccCCCCC--C------cCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTNP--C------YHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~P--C------~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||||...+  |      .-...|+++.   ++|.|.|+ +||+
T Consensus         4 idEC~~~~~~c~~~~~~~c~~~C~Nt~---GsY~C~C~-~Gy~   42 (53)
T d1apqa_           4 LDECASRSKSGEEDPQPQCQHLCHNYV---GGYFCSCR-PGYE   42 (53)
T ss_dssp             CCTTTCSTTTCCCSSSCTTSSEEEEET---TEEEEECS-TTCE
T ss_pred             cccccCCCCCcccCCCCCccCEeEcCC---CCeEeECC-CCCe
Confidence            67776532  2      2224799985   59999999 8996

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.0001  Score=34.81  Aligned_cols=26  Identities=35%  Similarity=0.862  Sum_probs=21.2

Q ss_pred             CCcCCceEecCCCCCCCeEEeCCCCCcCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGYKCRCSGTGYYGK   83 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~   83 (86)
                      .|...++|++..   ++|.|.|+ +||+|.
T Consensus         8 ~C~~~A~C~Nt~---Gsy~C~C~-~Gy~Gd   33 (40)
T d1gl4a2           8 QCSVHAECRDYA---TGFCCRCV-ANYTGN   33 (40)
T ss_dssp             GSCTTEEEEECS---SCEEEEEC-TTEEEC
T ss_pred             CCCCCCEeecCC---CCeEeECC-CCCcCC
Confidence            456678999985   59999999 899864

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=6.7e-05  Score=35.46  Aligned_cols=30  Identities=20%  Similarity=0.549  Sum_probs=23.7

Q ss_pred             cccCCC-CCCcCCceEecCCCCCCCeEEeCCCCCcCC
Q psy6902          47 QNACDT-NPCYHGGRCTQTFQDRTGYKCRCSGTGYYG   82 (86)
Q Consensus        47 ~~~C~~-~PC~ngg~C~~~~~~~~~~~C~C~~~g~~G   82 (86)
                      ||||.. .+|.  ..|++..   ++|.|.|+ +||+.
T Consensus         2 idEC~~~~~C~--~~C~N~~---Gsy~C~C~-~Gy~l   32 (40)
T d1dx5i3           2 IDECENGGFCS--GVCHNLP---GTFECICG-PDSAL   32 (40)
T ss_dssp             CCHHHHCSSCS--SEEEECS---SSEEEEEC-SSSSC
T ss_pred             ccccCCCcCcc--CEeeCCC---CCeEeECC-CCCee
Confidence            677754 5786  4899985   59999999 89974

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.00013  Score=36.40  Aligned_cols=32  Identities=22%  Similarity=0.457  Sum_probs=25.6

Q ss_pred             CCCCCCCCCC--Cee----CCccCCCCCCccCCcccccccccccc
Q psy6902           3 ACDPAHVRPG--CRI----QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         3 ~C~~~~c~~g--C~~----~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      .|..+||+||  |..    ..|.|.|+.+       |+|.+|+..
T Consensus         8 ~c~~~~C~NgG~C~~~~~~~~~~C~C~~g-------y~G~~Ce~~   45 (53)
T d3egfa_           8 SSYDGYCLNGGVCMHIESLDSYTCNCVIG-------YSGDRCQTR   45 (53)
T ss_dssp             TTSSCCSCSSCEEEEESSSSCEEEECCTT-------CCSSSSCCC
T ss_pred             CCCCCCCCCCcEeeccCCCCCeEeECCCC-------CcCCCCccC
Confidence            5678999996  863    2499999999       488999864

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00054  Score=32.83  Aligned_cols=31  Identities=26%  Similarity=0.770  Sum_probs=22.3

Q ss_pred             cccCCCCC---CcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTNP---CYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~P---C~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||||...+   +.-...|+++.   ++|.|.|+ +||.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~---Gsy~C~C~-~Gy~   34 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHL---GGFYCSCR-AGYV   34 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEET---TEEEEECC-TTEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCC---CCeEEECC-CCCe
Confidence            56776542   12235899985   59999999 8996

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=9.9e-05  Score=36.11  Aligned_cols=32  Identities=19%  Similarity=0.356  Sum_probs=25.2

Q ss_pred             CCCCCCCCCC--Cee----CCccCCCCCCccCCcccccccccccc
Q psy6902           3 ACDPAHVRPG--CRI----QDNQCICGKGCYPEYKFITQEECMTA   41 (86)
Q Consensus         3 ~C~~~~c~~g--C~~----~~~~C~c~~~c~~~~~~~~g~~C~~~   41 (86)
                      .|..+||+||  |..    ..|.|.|+.+       |+|.+|+..
T Consensus         6 ~c~~~~C~ngG~C~~~~~~~~~~C~C~~g-------y~G~~Ce~~   43 (48)
T d1nqlb_           6 LSHDGYCLHDGVCMYIEALDKYACNCVVG-------YIGERCQYR   43 (48)
T ss_dssp             STTCCEECTTCEEEEETTTTEEEEEECTT-------EESTTSCEE
T ss_pred             CCCCCCCCCCcEEeeeCCCCCeEEeCCCC-------cccCCCCcC
Confidence            5778999996  964    2389999999       489999753

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.77  E-value=0.00041  Score=33.26  Aligned_cols=31  Identities=29%  Similarity=0.699  Sum_probs=20.3

Q ss_pred             cccCCCCC---CcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTNP---CYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~P---C~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      ||||+..+   +.-...|++..   ++|.|.|+ +||.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~---gsy~C~C~-~Gy~   34 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYL---GGYYCSCR-VGYI   34 (45)
T ss_dssp             CCTTC-------CCSSEEEEET---TEEEEECC-TTEE
T ss_pred             CcCCccCCCCcCCCCCEeecCC---CCEEEeCC-CCCE
Confidence            46776532   22234899985   59999999 8995

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0011  Score=30.22  Aligned_cols=29  Identities=34%  Similarity=1.109  Sum_probs=22.8

Q ss_pred             ccCC-CCCCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          48 NACD-TNPCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        48 ~~C~-~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      |+|+ .+||-| |+|.+..   ++|.|.|. .||.
T Consensus         2 dECsignpCGn-GTCtNvi---GgFec~C~-~GFe   31 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVI---GGFECTCE-EGFE   31 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECS---SSEEECCS-SSSC
T ss_pred             CccccCCccCC-ceeeecc---cceEEeec-CCcC
Confidence            4554 489987 6999985   59999999 7995

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.39  E-value=0.0016  Score=32.34  Aligned_cols=31  Identities=35%  Similarity=0.863  Sum_probs=22.7

Q ss_pred             CCcCCceEecCCCCCCCeEE-eCCCCCcCCCCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGYKC-RCSGTGYYGKKCQ   86 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~~C-~C~~~g~~G~~Ce   86 (86)
                      ||.++++|..... .+.++| .|+ ++|+|.+||
T Consensus         2 pC~~~~~c~~~~~-~~~~vC~~C~-~~~~G~~Ce   33 (55)
T d1kloa1           2 PCPGGSSCAIVPK-TKEVVCTHCP-TGTAGKRCE   33 (55)
T ss_dssp             CSCTTCCEEECSS-SCCEEECSCC-TTEESTTSC
T ss_pred             cCcCCCccceeCC-CCCEEcCCCC-CCCccCccc
Confidence            5777788765432 246778 599 899999986

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.0026  Score=29.98  Aligned_cols=28  Identities=39%  Similarity=1.070  Sum_probs=21.5

Q ss_pred             ccCCC---CCCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          48 NACDT---NPCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        48 ~~C~~---~PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      |||..   .+|.+  .|++..   ++|+|.|+ .||.
T Consensus         1 dEC~~~~~~~C~~--~C~n~~---Gsy~C~C~-~Gy~   31 (42)
T d1nzia2           1 NECTDFVDVPCSH--FCNNFI---GGYFCSCP-PEYF   31 (42)
T ss_dssp             CTTTC-CCCCSSS--EEEEET---TEEEEECC-TTCE
T ss_pred             CCCCCCCCcCCCC--EeecCC---CCEEEeCC-CCCE
Confidence            45642   46875  799985   59999999 8996

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0026  Score=29.63  Aligned_cols=29  Identities=38%  Similarity=0.937  Sum_probs=22.6

Q ss_pred             cccCCCC--CCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTN--PCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~--PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      +|+|+.+  .|.+  .|++..   ++|+|.|+ +||.
T Consensus         2 ~neC~~~nggC~h--~C~n~~---g~~~C~C~-~Gy~   32 (40)
T d3bpse1           2 TNECLDNNGGCSH--VCNDLK---IGYECLCP-DGFQ   32 (40)
T ss_dssp             SCGGGTGGGGCSS--EEEECS---SSEEEECC-TTCC
T ss_pred             cccCCCCCCCCcC--EEEcCC---CCEEEECC-CCCE
Confidence            5777664  4764  899885   49999999 8996

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.002  Score=30.95  Aligned_cols=30  Identities=27%  Similarity=0.419  Sum_probs=22.9

Q ss_pred             CCCCCCCCC-Cee-C---CccCCCCCCccCCccccccccccc
Q psy6902           4 CDPAHVRPG-CRI-Q---DNQCICGKGCYPEYKFITQEECMT   40 (86)
Q Consensus         4 C~~~~c~~g-C~~-~---~~~C~c~~~c~~~~~~~~g~~C~~   40 (86)
                      +..++|+|| |.. .   .+.|.|+.+       |+|.+|+.
T Consensus         9 ~~~~yC~nG~C~~~~~~~~~~C~C~~g-------Y~G~RCe~   43 (46)
T d1k36a_           9 DMNGYCLHGQCIYLVDMSQNYCRCEVG-------YTGVRCEH   43 (46)
T ss_dssp             TCCSSCSSEEEEEETTTTEEEEEECTT-------CSSTTSCC
T ss_pred             cCCCcCcCCEEEEeCCCCccEeECCCC-------ceecCcee
Confidence            445899999 753 2   288999998       48899975

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0059  Score=29.73  Aligned_cols=29  Identities=17%  Similarity=0.393  Sum_probs=22.2

Q ss_pred             CCCCCCCC--CeeC---CccCCCCCCccCCccccccccccc
Q psy6902           5 DPAHVRPG--CRIQ---DNQCICGKGCYPEYKFITQEECMT   40 (86)
Q Consensus         5 ~~~~c~~g--C~~~---~~~C~c~~~c~~~~~~~~g~~C~~   40 (86)
                      ..++|+||  |.+.   .+.|.|+.+       |+|.+|+.
T Consensus        12 ~~~yC~nGgcc~~~~~~~~~C~C~~g-------y~G~rCe~   45 (50)
T d1ioxa_          12 YKHYCIKGRCRFVVAEQTPSCVCDEG-------YIGARCER   45 (50)
T ss_dssp             GTTSCTTCCEEEETTTTEEEECCCTT-------EETTTTCE
T ss_pred             cCCCccCCeEEEeCCCCCcEeECCCC-------CeeCCCcc
Confidence            35789999  5443   288999998       48899975

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.74  E-value=0.077  Score=24.80  Aligned_cols=26  Identities=35%  Similarity=0.940  Sum_probs=19.9

Q ss_pred             CCcCCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          54 PCYHGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        54 PC~ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      .|...|+|+-.       .|.|.+++|+|+.||
T Consensus        12 iCng~G~C~cG-------~C~C~~~gy~G~~Ce   37 (43)
T d1jv2b5          12 LCSGRGKCECG-------SCVCIQPGSYGDTCE   37 (43)
T ss_dssp             GGGGTEEEETT-------EEEECCSSCBSTTSC
T ss_pred             EECCCCEEECC-------EeEeCCCCccCCccc
Confidence            37778889854       688843699999986

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.073  Score=24.60  Aligned_cols=30  Identities=27%  Similarity=0.687  Sum_probs=24.0

Q ss_pred             cccCCCCCCcCCceEecCCCCCCCeEEeCCCCCcC
Q psy6902          47 QNACDTNPCYHGGRCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        47 ~~~C~~~PC~ngg~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      +|+|..++|..  .|....  .++|.|+|. .||.
T Consensus         4 vDPCf~~~CE~--qCqP~~--~~~Y~CiCa-eGFa   33 (43)
T d1dx5i1           4 VDPCFRANCEY--QCQPLD--QTSYLCVCA-EGFA   33 (43)
T ss_dssp             CCGGGGCCCSS--EEEECS--SSCEEEECC-TTEE
T ss_pred             cccccCCCcce--eeeeCC--CCcceEEec-cccc
Confidence            68898889885  687664  358999999 7985

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.82  E-value=0.06  Score=24.92  Aligned_cols=22  Identities=45%  Similarity=1.031  Sum_probs=18.0

Q ss_pred             CCceEecCCCCCCCeEEeCCCCCcCCCCCC
Q psy6902          57 HGGRCTQTFQDRTGYKCRCSGTGYYGKKCQ   86 (86)
Q Consensus        57 ngg~C~~~~~~~~~~~C~C~~~g~~G~~Ce   86 (86)
                      ..|+|+..       .|.|. +||+|..||
T Consensus        19 ~hG~C~~G-------~C~C~-~Gw~G~~Ce   40 (41)
T d1l3ya_          19 GRGLCFCG-------KCRCH-PGFEGSACQ   40 (41)
T ss_dssp             HHEEEETT-------EEEEC-TTCCTTTTC
T ss_pred             CCCeEECC-------EEEcC-CCCcccCcc
Confidence            45888753       69999 899999996

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.31  E-value=0.3  Score=23.20  Aligned_cols=18  Identities=28%  Similarity=0.781  Sum_probs=14.8

Q ss_pred             eEecCCCCCCCeEEeCCCCCcC
Q psy6902          60 RCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        60 ~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      .|+++.   ++|+|.|+ .||+
T Consensus        12 ~C~~~~---g~~~C~C~-~Gy~   29 (50)
T d1autl2          12 YCLEEV---GWRRCSCA-PGYK   29 (50)
T ss_dssp             EEEECS---SSEEEECC-TTEE
T ss_pred             EeecCC---CCeEEECC-CCCE
Confidence            688774   48999999 8996

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.90  E-value=0.37  Score=22.97  Aligned_cols=18  Identities=28%  Similarity=0.765  Sum_probs=14.9

Q ss_pred             eEecCCCCCCCeEEeCCCCCcC
Q psy6902          60 RCTQTFQDRTGYKCRCSGTGYY   81 (86)
Q Consensus        60 ~C~~~~~~~~~~~C~C~~~g~~   81 (86)
                      .|++..   ++|+|.|+ .||.
T Consensus        13 ~C~n~~---g~~~C~C~-~Gy~   30 (51)
T d2p3ua1          13 FCHEEQ---NSVVCSCA-RGYT   30 (51)
T ss_dssp             EEEEET---TEEEEECC-TTEE
T ss_pred             EeecCC---CCeEeEcC-CCCE
Confidence            687764   48999999 8996