Psyllid ID: psy7084
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 326 | ||||||
| 307213360 | 983 | Lysosomal alpha-mannosidase [Harpegnatho | 0.840 | 0.278 | 0.368 | 3e-38 | |
| 194761914 | 1080 | GF15795 [Drosophila ananassae] gi|190616 | 0.877 | 0.264 | 0.337 | 7e-38 | |
| 195118762 | 1079 | GI20521 [Drosophila mojavensis] gi|19391 | 0.837 | 0.253 | 0.335 | 4e-37 | |
| 195434116 | 1076 | GK14884 [Drosophila willistoni] gi|19416 | 0.837 | 0.253 | 0.338 | 6e-37 | |
| 24583443 | 1080 | lysosomal alpha-mannosidase, isoform B [ | 0.825 | 0.249 | 0.346 | 5e-36 | |
| 19921088 | 1080 | lysosomal alpha-mannosidase, isoform A [ | 0.825 | 0.249 | 0.346 | 5e-36 | |
| 195578231 | 1080 | GD23708 [Drosophila simulans] gi|1941909 | 0.815 | 0.246 | 0.332 | 5e-36 | |
| 195339843 | 1114 | GM18459 [Drosophila sechellia] gi|194130 | 0.815 | 0.238 | 0.332 | 5e-36 | |
| 157111150 | 1008 | lysosomal alpha-mannosidase (mannosidase | 0.812 | 0.262 | 0.352 | 1e-35 | |
| 322799964 | 1003 | hypothetical protein SINV_11995 [Solenop | 0.837 | 0.272 | 0.367 | 1e-35 |
| >gi|307213360|gb|EFN88812.1| Lysosomal alpha-mannosidase [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 168/312 (53%), Gaps = 38/312 (12%)
Query: 47 TVKTCLYLNISSCEPSETWDKFAINVYNALGRTV----------NRYVLQL-AERTSQNS 95
T+ TCL LNISSC +E DKF + VYN L R + N Y +QL + + S
Sbjct: 471 TMSTCLELNISSCVFTEGSDKFLVTVYNPLSRPIPTYVRLPVEGNAYDVQLVGQNDGRIS 530
Query: 96 SAKMELVFKA-TLPPMGYSSFFVSTGPGK-TSEVSPSHDNFIGTSMFGLRLDKDGLVSQL 153
+ ELVF+ +PP+G S+ ++ K T EV P +NFI + ++ + ++ DG V
Sbjct: 531 KTENELVFRTDNIPPVGMLSYLITRKQQKNTPEVQP--ENFISSELYNISINNDGNVVVN 588
Query: 154 LKNNHSLPMTQTFGYYVGHESDYGNNDNGEMSSGAYIFKPE---VNKSVVSKS------- 203
++ Q+F YY G E D +N SSGAYIF+P+ +N + + S
Sbjct: 589 FNKQKNMNFVQSFHYYEGAEGDNKVFEN--RSSGAYIFRPKNESINNFIYTGSYEIYKGP 646
Query: 204 ---EVNDST---VEDVVRL-LSNGEVTTTVYKGPGKTSEVSPSHDNFIGTSIPSFNSQNR 256
E++ + V V+R+ L V GP + I + +
Sbjct: 647 VVQEIHQTINEWVSQVIRVYLEEEHVEFDWLVGPILVKDKIGKE--IITKYTSNLKTDGV 704
Query: 257 FYTDSNGREMIERILNYRQTWELDNQEPISSNYYPVTSRIAVVDD--VLQMSVLTDRAQG 314
FYTDSNGREM++R+ NYR TW+L+ EP+S NYYPVTS+IA+ D+ L+++VLTDRAQG
Sbjct: 705 FYTDSNGREMLKRVRNYRPTWDLELHEPVSGNYYPVTSKIAIKDEEKQLKLNVLTDRAQG 764
Query: 315 GTSLKKGEIELM 326
G+S+ G +ELM
Sbjct: 765 GSSMDDGAVELM 776
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194761914|ref|XP_001963136.1| GF15795 [Drosophila ananassae] gi|190616833|gb|EDV32357.1| GF15795 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|195118762|ref|XP_002003905.1| GI20521 [Drosophila mojavensis] gi|193914480|gb|EDW13347.1| GI20521 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
| >gi|195434116|ref|XP_002065049.1| GK14884 [Drosophila willistoni] gi|194161134|gb|EDW76035.1| GK14884 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
| >gi|24583443|ref|NP_723591.1| lysosomal alpha-mannosidase, isoform B [Drosophila melanogaster] gi|22946166|gb|AAN10754.1| lysosomal alpha-mannosidase, isoform B [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|19921088|ref|NP_609408.1| lysosomal alpha-mannosidase, isoform A [Drosophila melanogaster] gi|5052492|gb|AAD38576.1|AF145601_1 BcDNA.GH02419 [Drosophila melanogaster] gi|22946165|gb|AAF52958.2| lysosomal alpha-mannosidase, isoform A [Drosophila melanogaster] gi|220960016|gb|ACL92544.1| CG6206-PA [synthetic construct] | Back alignment and taxonomy information |
|---|
| >gi|195578231|ref|XP_002078969.1| GD23708 [Drosophila simulans] gi|194190978|gb|EDX04554.1| GD23708 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
| >gi|195339843|ref|XP_002036526.1| GM18459 [Drosophila sechellia] gi|194130406|gb|EDW52449.1| GM18459 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
| >gi|157111150|ref|XP_001651410.1| lysosomal alpha-mannosidase (mannosidase alpha class 2b member 1) [Aedes aegypti] gi|108878513|gb|EAT42738.1| AAEL005749-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|322799964|gb|EFZ21090.1| hypothetical protein SINV_11995 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 326 | ||||||
| UNIPROTKB|F1MMX7 | 999 | MAN2B1 "Lysosomal alpha-mannos | 0.677 | 0.221 | 0.373 | 3.9e-33 | |
| UNIPROTKB|Q29451 | 999 | MAN2B1 "Lysosomal alpha-mannos | 0.677 | 0.221 | 0.373 | 3.9e-33 | |
| FB|FBgn0027611 | 1080 | LM408 "Lysosomal alpha-mannosi | 0.607 | 0.183 | 0.364 | 8e-31 | |
| UNIPROTKB|G5E928 | 1010 | MAN2B1 "Mannosidase, alpha, cl | 0.546 | 0.176 | 0.365 | 3.4e-28 | |
| UNIPROTKB|O00754 | 1011 | MAN2B1 "Lysosomal alpha-mannos | 0.546 | 0.176 | 0.365 | 3.4e-28 | |
| MGI|MGI:107286 | 1013 | Man2b1 "mannosidase 2, alpha B | 0.536 | 0.172 | 0.352 | 6.5e-27 | |
| ZFIN|ZDB-GENE-050327-52 | 982 | man2b1 "mannosidase, alpha, cl | 0.539 | 0.179 | 0.329 | 7.8e-27 | |
| UNIPROTKB|F1SEY1 | 1008 | MAN2B1 "Uncharacterized protei | 0.552 | 0.178 | 0.366 | 1e-26 | |
| UNIPROTKB|F1PKB2 | 1007 | MAN2B1 "Uncharacterized protei | 0.552 | 0.178 | 0.371 | 1e-26 | |
| FB|FBgn0032253 | 950 | CG5322 [Drosophila melanogaste | 0.607 | 0.208 | 0.351 | 1e-24 |
| UNIPROTKB|F1MMX7 MAN2B1 "Lysosomal alpha-mannosidase D peptide" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 325 (119.5 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 96/257 (37%), Positives = 132/257 (51%)
Query: 95 SSAKMELVFKATLPPMGYSSFFVSTGPGKTSEVSPSHDNFIGTSMFGLRLDKD-GLVSQL 153
SS EL+F A +P +G+S + VS P + + S S D I R D + GL+ +L
Sbjct: 556 SSDSQELLFSALVPAVGFSIYSVSQMPNQRPQKSWSRDLVIQNEYLRARFDPNTGLLMEL 615
Query: 154 --LKNNHSLPMTQTFGYYVGHESDYGNNDNGEMSSGAYIF-----KPXXXXXXXXXXXXX 206
L+ N LP+ Q F +Y + GNN + + +SGAYIF KP
Sbjct: 616 ENLEQNLLLPVRQAFYWY---NASTGNNLSSQ-ASGAYIFRPNQNKPLFVSHWAQTHLVK 671
Query: 207 XXTVEDV-----------VRLLSNG---EVTTTVYK---GPGKTSEVSPSHDNFIGTSIP 249
V++V VRL E+ TV G G EV D + T
Sbjct: 672 ASLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALAT--- 728
Query: 250 SFNSQNRFYTDSNGREMIERILNYRQTWELDNQEPISSNYYPVTSRIAVVDDVLQMSVLT 309
+ FYTDSNGRE++ER NYR TW+L+ EP++ NYYPV SRI + D +Q++VLT
Sbjct: 729 ----RGLFYTDSNGREILERRRNYRPTWKLNQTEPVAGNYYPVNSRIYITDGNMQLTVLT 784
Query: 310 DRAQGGTSLKKGEIELM 326
DR+QGG+SL+ G +ELM
Sbjct: 785 DRSQGGSSLRDGSLELM 801
|
|
| UNIPROTKB|Q29451 MAN2B1 "Lysosomal alpha-mannosidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0027611 LM408 "Lysosomal alpha-mannosidase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E928 MAN2B1 "Mannosidase, alpha, class 2B, member 1, isoform CRA_a" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O00754 MAN2B1 "Lysosomal alpha-mannosidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:107286 Man2b1 "mannosidase 2, alpha B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050327-52 man2b1 "mannosidase, alpha, class 2B, member 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SEY1 MAN2B1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PKB2 MAN2B1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0032253 CG5322 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 326 | |||
| pfam07748 | 379 | pfam07748, Glyco_hydro_38C, Glycosyl hydrolases fa | 4e-17 | |
| PLN02701 | 1050 | PLN02701, PLN02701, alpha-mannosidase | 3e-09 |
| >gnl|CDD|219551 pfam07748, Glyco_hydro_38C, Glycosyl hydrolases family 38 C-terminal domain | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 4e-17
Identities = 59/277 (21%), Positives = 86/277 (31%), Gaps = 72/277 (25%)
Query: 72 VYNALGRTVNRYVLQLAERTSQNSSAKMELVFKATLPPMGYSSFFVSTGPGKTSEVSPSH 131
V+N L V T+P VS+ ++ S
Sbjct: 5 VFNPLAWERTEVV---------------------TIP--------VSSPNVSVTDESVI- 34
Query: 132 DNFIGTSMFGLRLDKDGLVSQL--LKNNHSLP--MTQTFGYY---------VGHESDYGN 178
+ + D GL+ + +N + + F Y + DY
Sbjct: 35 ---LENGFLKVEFDPTGLLKSIYDKENGREVLAGVGNQFQLYEDKPLYWDAWDIDKDYEE 91
Query: 179 NDNGEMSSGAYIFKPEVNKSVVSKSEV---NDSTVEDVVRLLSNG---EVTTTVYKGPGK 232
SGAY+F P V + EV S + V+RL + E TTV
Sbjct: 92 KPLEVQDSGAYLFLPNGPLRAVVRVEVHQYGSSWISQVIRLYAGKPRIEFETTV--DW-- 147
Query: 233 TSEVSPSHDNFIGTSIPS-FNSQNRFYTDSNGREMIERILNYRQTWELDNQEPISSNYYP 291
P + P+ NS FY D NG + P + YY
Sbjct: 148 -----PERHKELKVRFPTDINSDKAFYEDQNGVIERKL------PTHP--NTPWEAAYYE 194
Query: 292 VTSRIAVVDD--VLQMSVLTDRAQGGTSLKKGEIELM 326
V S + D +SVL D G +SL G++EL
Sbjct: 195 VPSHRFIDDSEASYGVSVLNDSKYGVSSLADGQLELS 231
|
Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Length = 379 |
| >gnl|CDD|178304 PLN02701, PLN02701, alpha-mannosidase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 326 | |||
| KOG1959|consensus | 996 | 100.0 | ||
| PLN02701 | 1050 | alpha-mannosidase | 100.0 | |
| KOG1958|consensus | 1129 | 100.0 | ||
| PF07748 | 457 | Glyco_hydro_38C: Glycosyl hydrolases family 38 C-t | 99.97 | |
| PRK09819 | 875 | alpha-mannosidase; Provisional | 99.86 | |
| KOG4342|consensus | 1078 | 99.21 | ||
| COG0383 | 943 | AMS1 Alpha-mannosidase [Carbohydrate transport and | 98.06 |
| >KOG1959|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-66 Score=519.41 Aligned_cols=272 Identities=40% Similarity=0.678 Sum_probs=240.2
Q ss_pred cCcccccccccccccCCc-CCCeeEEEEEcCCCceEEEEEEEe----------------e-ee----------eccCCCC
Q psy7084 46 STVKTCLYLNISSCEPSE-TWDKFAINVYNALGRTVNRYVLQL----------------A-ER----------TSQNSSA 97 (326)
Q Consensus 46 ~~~~~c~~ln~s~C~~t~-~~~~~~vvVyNpL~~~r~~vV~v~----------------P-qi----------~~~~~~~ 97 (326)
.+|++|++||||+||.|+ .++.+.|+|||||+|+++++|||| | |+ ..+....
T Consensus 459 ~~f~~C~~lNiS~C~~t~~~~~~~~v~~YNpLa~~~t~~VRiPV~~~~~~V~D~~G~~v~Sqivp~~~~~~al~~~~~~~ 538 (996)
T KOG1959|consen 459 GEFQSCLLLNISECAFTKDGADNFIVTLYNPLAHTVTQYVRIPVKEENYRVTDEKGRTVPSQIVPVPWQVLALESRNNDT 538 (996)
T ss_pred ccchhhhhhccccCCCCcCCcCcEEEEEEcCCcceeeeEEEEeccCCCeEEECCCCCCcccceeccchhhhhhhccccCC
Confidence 489999999999999995 788999999999999999999999 1 22 2456778
Q ss_pred cEEEEEEEecCCCceEEEEEEeCCCCCC---------CCCCCCceeEeeceEEEEEcC-CCCEEEEEE--CCceeeeeEE
Q psy7084 98 KMELVFKATLPPMGYSSFFVSTGPGKTS---------EVSPSHDNFIGTSMFGLRLDK-DGLVSQLLK--NNHSLPMTQT 165 (326)
Q Consensus 98 ~~~L~F~a~vPpLG~~ty~v~~~~~~~~---------~~~~~~~~~IeN~~lkl~fd~-~G~L~sl~~--~~~~~~~~~~ 165 (326)
+++|+|.|.||||||++|+|++..+... ++.......|+|+++|+.||. +|+|+++.. +|.+.++.|+
T Consensus 539 ~~eLvf~asvpplg~aty~i~k~~~~~~~~~~~~~~i~~~~~n~~~V~n~~~kl~fd~~tG~l~~v~~n~t~~t~~V~Q~ 618 (996)
T KOG1959|consen 539 KHELVFKASVPPLGIATYFIKKVASTERGSASHVRNIKKRESNATEVGNSHLKLVFDNDTGLLKTVEMNQTGVTENVDQE 618 (996)
T ss_pred CceEEEEEEecCccceEEEEeecCcccccccccccccccccCcceEeccceEEEEEcCCCCceEEEEecccCcceeeeee
Confidence 9999999999999999999996544322 112333488999999999998 899999887 5999999999
Q ss_pred EEEEeccccCCCCCCCCCCCCceeEecCCCCceEee-ccc----c-cCccEEEEEEEecCcEEE--EEEecCCCCeEEE-
Q psy7084 166 FGYYVGHESDYGNNDNGEMSSGAYIFKPEVNKSVVS-KSE----V-NDSTVEDVVRLLSNGEVT--TTVYKGPGKTSEV- 236 (326)
Q Consensus 166 f~~Y~~~~~~~Gd~~~~~~~sGAYiF~P~~~~~~~~-~~~----v-~Gpl~~ev~~~~~~~~~s--vrLy~~~~~~vEV- 236 (326)
|.+|.+.. |++ +.|.||||+|||.. .+.++ +.. | .|+|+.||||.+ ++|++ +|||+|.+ ++|+
T Consensus 619 f~~Y~~~~---g~n--~~q~SgAYiFRp~~-~~~~~~~~~vel~vv~G~LV~EVhQ~f-~~wiSQviRvy~g~~-~~E~E 690 (996)
T KOG1959|consen 619 FGYYKGYR---GDN--DKQASGAYIFRPGQ-ADIPIVSDQVELTVVDGPLVKEVHQQF-NPWISQVIRVYEGKN-HVEFE 690 (996)
T ss_pred eEEEEeec---CCc--CCccCcceEecCCC-CCccccccceEEEEecCchHHHHHHHH-HHHHhheeEecCCCc-ceEEE
Confidence 99999886 776 35999999999943 33343 322 3 999999999999 99999 99999999 8884
Q ss_pred -----EcCCCCcceE-EEEE----ecCCCeEEecCCCCeeEEeecccccCcccccccccccceEeeeeeEEEeeCceeEE
Q psy7084 237 -----SPSHDNFIGT-SIPS----FNSQNRFYTDSNGREMIERILNYRQTWELDNQEPISSNYYPVTSRIAVVDDVLQMS 306 (326)
Q Consensus 237 -----i~i~d~~~~k-vv~r----i~s~~~fyTDsNG~~~ikR~~~~r~~w~~~~~~pia~NyYP~~s~~~I~D~~~~lt 306 (326)
||++|+ +|| +++| |++++.|||||||+|||||.+++|++|.++.++|+|||||||+++|||+|++.||+
T Consensus 691 w~VGpIp~~d~-~gkEvVtr~~t~i~S~g~fYTDSNGRe~~kR~~d~r~~~~~~~~epiAGNYYPvt~~i~lqD~~~rl~ 769 (996)
T KOG1959|consen 691 WLVGPIPIDDG-IGKEVVTRFSTEISSNGVFYTDSNGREMIKRVRDKREDFVLDVNEPIAGNYYPVTSRIYLQDSKKRLS 769 (996)
T ss_pred EEecceecCCC-ccceEEEEeccccccCceEEecCcHHHHHHHHhcccCCCccccCccccccccccceeeEEecCCceEE
Confidence 999999 999 9999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCcceeeccCCCeeeeC
Q psy7084 307 VLTDRAQGGTSLKKGEIELM 326 (326)
Q Consensus 307 Vl~drs~G~sSl~~G~lElM 326 (326)
||+||||||||++||+||||
T Consensus 770 vL~DRAqGgsSl~dG~lElM 789 (996)
T KOG1959|consen 770 VLNDRAQGGSSLKDGQLELM 789 (996)
T ss_pred EEeecccCCccccCCeEEEE
Confidence 99999999999999999999
|
|
| >PLN02701 alpha-mannosidase | Back alignment and domain information |
|---|
| >KOG1958|consensus | Back alignment and domain information |
|---|
| >PF07748 Glyco_hydro_38C: Glycosyl hydrolases family 38 C-terminal domain; InterPro: IPR011682 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK09819 alpha-mannosidase; Provisional | Back alignment and domain information |
|---|
| >KOG4342|consensus | Back alignment and domain information |
|---|
| >COG0383 AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 326 | ||||
| 1o7d_D | 282 | The Structure Of The Bovine Lysosomal A-Mannosidase | 3e-23 | ||
| 1qwu_A | 1045 | Golgi Alpha-Mannosidase Ii D341n Mutant Complex Wit | 4e-09 | ||
| 1qwn_A | 1045 | Golgi Alpha-Mannosidase Ii Covalent Intermediate Co | 5e-09 | ||
| 3cv5_A | 1045 | Golgi Mannosidase Ii D204a Catalytic Nucleophile Mu | 5e-09 | ||
| 1hxk_A | 1015 | Golgi Alpha-Mannosidase Ii In Complex With Deoxyman | 5e-09 | ||
| 3dx3_A | 1045 | Golgi Alpha-Mannosidase Ii In Complex With Mannosta | 5e-09 | ||
| 1ps3_A | 1045 | Golgi Alpha-mannosidase Ii In Complex With Kifunens | 5e-09 | ||
| 1hty_A | 1015 | Golgi Alpha-Mannosidase Ii Length = 1015 | 4e-07 | ||
| 1o7d_C | 159 | The Structure Of The Bovine Lysosomal A-Mannosidase | 1e-04 |
| >pdb|1O7D|D Chain D, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 282 | Back alignment and structure |
|
| >pdb|1QWU|A Chain A, Golgi Alpha-Mannosidase Ii D341n Mutant Complex With 5-F-Guloside Length = 1045 | Back alignment and structure |
| >pdb|1QWN|A Chain A, Golgi Alpha-Mannosidase Ii Covalent Intermediate Complex With 5- Fluoro-Gulosyl-Fluoride Length = 1045 | Back alignment and structure |
| >pdb|3CV5|A Chain A, Golgi Mannosidase Ii D204a Catalytic Nucleophile Mutant Complex With 3alpha,6alpha-Mannopentaose Length = 1045 | Back alignment and structure |
| >pdb|1HXK|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin Length = 1015 | Back alignment and structure |
| >pdb|3DX3|A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Mannostatin Analog (1r,2r, 3s,4r,5r)-5-Aminocyclopentane-1,2,3,4-Tetraol Length = 1045 | Back alignment and structure |
| >pdb|1PS3|A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine Length = 1045 | Back alignment and structure |
| >pdb|1HTY|A Chain A, Golgi Alpha-Mannosidase Ii Length = 1015 | Back alignment and structure |
| >pdb|1O7D|C Chain C, The Structure Of The Bovine Lysosomal A-Mannosidase Suggests A Novel Mechanism For Low Ph Activation Length = 159 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 326 | |||
| 1o7d_D | 282 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 2e-38 | |
| 3bvx_A | 1045 | Alpha-mannosidase 2; family 38 glycoysl hydrolase, | 2e-30 | |
| 1o7d_C | 159 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 3e-11 | |
| 3lvt_A | 899 | Glycosyl hydrolase, family 38; PSI, MCSG, structur | 9e-09 |
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 Length = 282 | Back alignment and structure |
|---|
Score = 137 bits (345), Expect = 2e-38
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 22/210 (10%)
Query: 135 IGTSMFGLRLDKD-GLVSQL--LKNNHSLPMTQTFGYYVGHESDYGNNDNGEMSSGAYIF 191
I R D + GL+ +L L+ N LP+ Q F +Y + ++ +SGAYIF
Sbjct: 5 IQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQ----ASGAYIF 60
Query: 192 KPEVNKSVVSKS----EVNDSTVEDVVRLLSNGEVT--TTVYKGPG-----KTSEVSPSH 240
+P NK + + +++ V + + +Y T P
Sbjct: 61 RPNQNKPLFVSHWAQTHLVKASLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVG 120
Query: 241 DNFIGTSIPSF----NSQNRFYTDSNGREMIERILNYRQTWELDNQEPISSNYYPVTSRI 296
D + I F ++ FYTDSNGRE++ER NYR TW+L+ EP++ NYYPV SRI
Sbjct: 121 DGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTWKLNQTEPVAGNYYPVNSRI 180
Query: 297 AVVDDVLQMSVLTDRAQGGTSLKKGEIELM 326
+ D +Q++VLTDR+QGG+SL+ G +ELM
Sbjct: 181 YITDGNMQLTVLTDRSQGGSSLRDGSLELM 210
|
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... Length = 1045 | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 Length = 159 | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} Length = 899 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 326 | |||
| 1o7d_D | 282 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 100.0 | |
| 3bvx_A | 1045 | Alpha-mannosidase 2; family 38 glycoysl hydrolase, | 100.0 | |
| 2wyh_A | 923 | Alpha-mannosidase; hydrolase, glycosidase, glycosi | 99.97 | |
| 3lvt_A | 899 | Glycosyl hydrolase, family 38; PSI, MCSG, structur | 99.96 | |
| 1o7d_C | 159 | Lysosomal alpha-mannosidase; hydrolase, glycosyl h | 99.54 |
| >1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-50 Score=370.56 Aligned_cols=188 Identities=41% Similarity=0.690 Sum_probs=169.8
Q ss_pred ceeEeeceEEEEEcC-CCCEEEEEE--CCceeeeeEEEEEEeccccCCCCCCCCCCCCceeEecCCCCceEeeccc----
Q psy7084 132 DNFIGTSMFGLRLDK-DGLVSQLLK--NNHSLPMTQTFGYYVGHESDYGNNDNGEMSSGAYIFKPEVNKSVVSKSE---- 204 (326)
Q Consensus 132 ~~~IeN~~lkl~fd~-~G~L~sl~~--~~~~~~~~~~f~~Y~~~~~~~Gd~~~~~~~sGAYiF~P~~~~~~~~~~~---- 204 (326)
++.|+|+++++.||+ +|+|+++++ +|.+.++.++|.+|.+.. |++ .+.+.||||+|+|++..+.++...
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~---g~~-~~~~~SGAYiFrP~g~~~~~~~~~~~~~ 77 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNAST---GNN-LSSQASGAYIFRPNQNKPLFVSHWAQTH 77 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCC---CBT-TBSCCCCSSCCCBSSSSCEESCSCCEEE
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEeccc---CCC-CCCCCCceEEecCCCCCCcccCCCcEEE
Confidence 578999999999999 899999997 789999999999999875 543 246899999999997655555433
Q ss_pred c-cCccEEEEEEEecCcEEE--EEEecCCCCeEEE------EcCCCCcceE-EEEE----ecCCCeEEecCCCCeeEEee
Q psy7084 205 V-NDSTVEDVVRLLSNGEVT--TTVYKGPGKTSEV------SPSHDNFIGT-SIPS----FNSQNRFYTDSNGREMIERI 270 (326)
Q Consensus 205 v-~Gpl~~ev~~~~~~~~~s--vrLy~~~~~~vEV------i~i~d~~~~k-vv~r----i~s~~~fyTDsNG~~~ikR~ 270 (326)
+ +||+++||++.+ ++|++ +|||++.. ++|+ ||++++ .|| +++| |+|++.||||+||+||+||.
T Consensus 78 v~~G~lv~eV~~~~-~~~~sq~~Rly~~~~-~vE~e~~Vgpipi~d~-~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~ 154 (282)
T 1o7d_D 78 LVKASLVQEVHQNF-SAWCSQVVRLYPRQR-HLELEWTVGPIPVGDG-WGKEVISRFDTALATRGLFYTDSNGREILERR 154 (282)
T ss_dssp EEECSSCEEEEEEE-ETTEEEEEEECTTCS-SEEEEEEECCCCCTTS-CCEEEEEEEECCCCCTTEEEEESTTSSEEEEE
T ss_pred EEECCEEEEEEEEE-CCcEEEEEEEecCCc-eEEEEEEEccccccCC-CCcEEEEEEEeeeccCCeEEECCCCceeeEEE
Confidence 2 999999999999 88998 89999998 9985 688888 899 9999 88899999999999999999
Q ss_pred cccccCcccccccccccceEeeeeeEEEeeCceeEEEEeCCcceeeccCCCeeeeC
Q psy7084 271 LNYRQTWELDNQEPISSNYYPVTSRIAVVDDVLQMSVLTDRAQGGTSLKKGEIELM 326 (326)
Q Consensus 271 ~~~r~~w~~~~~~pia~NyYP~~s~~~I~D~~~~ltVl~drs~G~sSl~~G~lElM 326 (326)
+++|++|+++.++|++||||||+++|||+|++.||+|++|||+||||+++|+||||
T Consensus 155 ~~~r~~~~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl~~G~lElM 210 (282)
T 1o7d_D 155 RNYRPTWKLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELM 210 (282)
T ss_dssp TTCCSSSCCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCSSTTEEEEE
T ss_pred eccccccccccccCcccceeeeeeEEEEEcCCeEEEEEecccccccccCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999
|
| >3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ... | Back alignment and structure |
|---|
| >2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A* | Back alignment and structure |
|---|
| >3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 326 | ||||
| g1o7d.2 | 490 | b.30.5.6 (C:488-585,D:603-875,E:885-1007) Lysosoma | 2e-47 | |
| d3bvua2 | 522 | b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II { | 3e-33 |
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 522 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 326 | |||
| g1o7d.2 | 490 | Lysosomal alpha-mannosidase {Cow (Bos taurus) [Tax | 100.0 | |
| d3bvua2 | 522 | Golgi alpha-mannosidase II {Fruit fly (Drosophila | 100.0 |
| >d3bvua2 b.30.5.6 (A:523-1044) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|