Psyllid ID: psy7100

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70------
Protein Sequence
MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEEGK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHccccHHHHHHHHHHHHcccccEEEccc
Coil and Loop (DISEMBL)
MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLeienseesssgwMLLSTLNLLaagdvslveegk
Flexible Loop (DISEMBL)
mtdkfrdvhqfcdhvsrLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLlaagdvslveegk
Low Complexity Region (SEG)
MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEEGK
Disordered region (IsUnstruct)
******DVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIE******SGWMLLSTLNLLAAGDV*******
Disordered Region (DISOPRED)
**DKFRDVHQFCDHVSRLMVTK***************AIAKFLEIENSEESSSGWMLLSTLNLLAAGDV*******
Disordered Region (DISEMBL)
MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEEGK
Disordered Region (DISPRO)
*TDKFRDVHQFCDHVSRLMVTKVCQRASNQ****ASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDV*L*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEEGK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	76	2.2.26 [Sep-21-2011]
Q8IZQ1	3526	WD repeat and FYVE domain	yes	N/A	0.868	0.018	0.651	2e-17
Q6VNB8	3508	WD repeat and FYVE domain	yes	N/A	0.868	0.018	0.651	2e-17

>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 54/66 (81%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct: 70  MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query: 61  LNLLAA 66
           +NLLA+
Sbjct: 130 INLLAS 135

Homo sapiens (taxid: 9606)

>sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus GN=Wdfy3 PE=1 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 54/66 (81%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct: 70  MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query: 61  LNLLAA 66
           +NLLA+
Sbjct: 130 INLLAS 135


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.126    0.357 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,443,273
Number of Sequences: 539616
Number of extensions: 562909
Number of successful extensions: 1407
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1401
Number of HSP's gapped (non-prelim): 6
length of query: 76
length of database: 191,569,459
effective HSP length: 47
effective length of query: 29
effective length of database: 166,207,507
effective search space: 4820017703
effective search space used: 4820017703
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	76
357622950	3478	hypothetical protein KGM_22003 [Danaus p	0.960	0.020	0.739	3e-23
270002019	3378	hypothetical protein TcasGA2_TC000957 [T	0.960	0.021	0.726	5e-22
189234451	3381	PREDICTED: similar to blue cheese CG1400	0.960	0.021	0.726	5e-22
443729221	1917	hypothetical protein CAPTEDRAFT_187188 [	0.960	0.038	0.671	3e-21
242010104	3546	WD repeat and FYVE domain-containing pro	0.960	0.020	0.698	1e-20
405978839	3642	WD repeat and FYVE domain-containing pro	0.960	0.020	0.602	9e-19
427788307	3525	Putative kinase a-anchor protein neurobe	0.960	0.020	0.630	4e-17
328697893	3470	PREDICTED: WD repeat and FYVE domain-con	0.868	0.019	0.681	9e-17
260802316	3485	hypothetical protein BRAFLDRAFT_202950 [	0.960	0.020	0.575	1e-16
383859858	4136	PREDICTED: WD repeat and FYVE domain-con	0.960	0.017	0.712	2e-16

>gi|357622950|gb|EHJ74292.1| hypothetical protein KGM_22003 [Danaus plexippus]

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 64/73 (87%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           M +KF D+  FC  VS+LMV+++ +RASNQSTE ASCAIAKFLEIENSEESS+GWMLLST
Sbjct: 77  MNEKFWDILSFCQQVSKLMVSEIRKRASNQSTEAASCAIAKFLEIENSEESSNGWMLLST 136

Query: 61  LNLLAAGDVSLVE 73
           LNLLAAGD SL++
Sbjct: 137 LNLLAAGDQSLIQ 149

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002019|gb|EEZ98466.1| hypothetical protein TcasGA2_TC000957 [Tribolium castaneum]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 62/73 (84%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           M +KF D+  FC  VS LMV+++ +RASNQSTE ASCAIAKFLEIEN EESS+GWMLLST
Sbjct: 81  MNEKFWDILAFCHQVSLLMVSEIRKRASNQSTEAASCAIAKFLEIENCEESSNGWMLLST 140

Query: 61  LNLLAAGDVSLVE 73
           LNLLAAGD +LV+
Sbjct: 141 LNLLAAGDATLVQ 153

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234451|ref|XP_967488.2| PREDICTED: similar to blue cheese CG14001-PA [Tribolium castaneum]

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 62/73 (84%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           M +KF D+  FC  VS LMV+++ +RASNQSTE ASCAIAKFLEIEN EESS+GWMLLST
Sbjct: 81  MNEKFWDILAFCHQVSLLMVSEIRKRASNQSTEAASCAIAKFLEIENCEESSNGWMLLST 140

Query: 61  LNLLAAGDVSLVE 73
           LNLLAAGD +LV+
Sbjct: 141 LNLLAAGDATLVQ 153

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443729221|gb|ELU15205.1| hypothetical protein CAPTEDRAFT_187188 [Capitella teleta]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/73 (67%), Positives = 62/73 (84%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           MT+KF D+ QFC HVSRLMV+++ +RASNQST+ ASC+I +FLEIE++EE S GWMLLST
Sbjct: 72  MTEKFPDILQFCSHVSRLMVSEIRRRASNQSTDAASCSIVRFLEIESTEELSKGWMLLST 131

Query: 61  LNLLAAGDVSLVE 73
           LNLL AG  S+V+
Sbjct: 132 LNLLCAGPSSIVD 144

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|242010104|ref|XP_002425816.1| WD repeat and FYVE domain-containing protein, putative [Pediculus humanus corporis] gi|212509749|gb|EEB13078.1| WD repeat and FYVE domain-containing protein, putative [Pediculus humanus corporis]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/73 (69%), Positives = 63/73 (86%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           MTDKF+D+  FC  VS+LMV ++ +RASNQSTE AS AI KFLEIENSEESS+GWMLL+T
Sbjct: 77  MTDKFKDILLFCRVVSQLMVGEIRKRASNQSTEEASTAIVKFLEIENSEESSNGWMLLTT 136

Query: 61  LNLLAAGDVSLVE 73
           +NLLA+GD +LV+
Sbjct: 137 INLLASGDDALVQ 149

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405978839|gb|EKC43200.1| WD repeat and FYVE domain-containing protein 3 [Crassostrea gigas]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 61/73 (83%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           MT+KF DV QFC H+S+LMVT++ +RASNQSTE ASCAI  FLE+++SE + +GWMLL+ 
Sbjct: 74  MTEKFGDVLQFCSHLSKLMVTEIRRRASNQSTEAASCAIVTFLEMDSSETTGNGWMLLTA 133

Query: 61  LNLLAAGDVSLVE 73
           LNLL+ G+ +L++
Sbjct: 134 LNLLSCGNQALID 146

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|427788307|gb|JAA59605.1| Putative kinase a-anchor protein neurobeachin [Rhipicephalus pulchellus]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 58/73 (79%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           + DKF DV  F   VS+LMV+++ +RASNQSTE AS AIA+FLEIE++EE S GWMLL+T
Sbjct: 78  IIDKFSDVLAFSKLVSKLMVSEIRRRASNQSTESASSAIAQFLEIESTEEQSRGWMLLAT 137

Query: 61  LNLLAAGDVSLVE 73
           +NLLA+G   LVE
Sbjct: 138 MNLLASGGAPLVE 150

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328697893|ref|XP_001948747.2| PREDICTED: WD repeat and FYVE domain-containing protein 3-like [Acyrthosiphon pisum]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 45/66 (68%), Positives = 54/66 (81%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           + +KF D++ +C  +S LMV ++ QRASNQSTE AS AIA FLEIEN EESS+GWMLLST
Sbjct: 81  IIEKFCDINSWCSEMSALMVAEIRQRASNQSTETASRAIASFLEIENCEESSNGWMLLST 140

Query: 61  LNLLAA 66
           LNLLAA
Sbjct: 141 LNLLAA 146

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260802316|ref|XP_002596038.1| hypothetical protein BRAFLDRAFT_202950 [Branchiostoma floridae] gi|229281292|gb|EEN52050.1| hypothetical protein BRAFLDRAFT_202950 [Branchiostoma floridae]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 57/73 (78%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           MT+KF D+ QF  H  RLMV ++ +RASN+STE ASC+I ++LEI+  EE+S GWMLL++
Sbjct: 72  MTEKFGDILQFSSHCGRLMVNEIRRRASNKSTEAASCSIVEYLEIKTVEETSCGWMLLTS 131

Query: 61  LNLLAAGDVSLVE 73
           LNLLAAG   +V+
Sbjct: 132 LNLLAAGGKEIVD 144

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|383859858|ref|XP_003705409.1| PREDICTED: WD repeat and FYVE domain-containing protein 3-like [Megachile rotundata]

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 62/73 (84%)

Query: 1   MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
           M++KF D+  F   VSRLMV+++ +RASNQSTE ASCAI KFLEIENSEESS+GWMLLS 
Sbjct: 868 MSEKFWDILAFTQQVSRLMVSEIRKRASNQSTETASCAIVKFLEIENSEESSNGWMLLSA 927

Query: 61  LNLLAAGDVSLVE 73
           LNLLAAGD SL++
Sbjct: 928 LNLLAAGDTSLIQ 940

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	76
FB|FBgn0043362	3489	bchs "blue cheese" [Drosophila	0.960	0.020	0.684	1.8e-19
RGD|1307097	3505	Wdfy3 "WD repeat and FYVE doma	0.960	0.020	0.602	3.1e-15
MGI|MGI:1096875	3508	Wdfy3 "WD repeat and FYVE doma	0.960	0.020	0.602	3.1e-15
UNIPROTKB|F1N6Q9	3509	WDFY3 "Uncharacterized protein	0.960	0.020	0.602	3.1e-15
UNIPROTKB|E2RLD7	3509	WDFY3 "Uncharacterized protein	0.960	0.020	0.602	3.1e-15
UNIPROTKB|E1BRH2	3511	WDFY3 "Uncharacterized protein	0.960	0.020	0.602	3.1e-15
UNIPROTKB|J9PB38	3512	WDFY3 "Uncharacterized protein	0.960	0.020	0.602	3.1e-15
UNIPROTKB|Q8IZQ1	3526	WDFY3 "WD repeat and FYVE doma	0.960	0.020	0.602	3.1e-15
UNIPROTKB|E1BPS3	3527	WDFY3 "Uncharacterized protein	0.960	0.020	0.602	3.1e-15
UNIPROTKB|F1RW14	3527	WDFY3 "Uncharacterized protein	0.960	0.020	0.602	3.1e-15

FB|FBgn0043362 bchs "blue cheese" [Drosophila melanogaster (taxid:7227)]

 Score = 251 (93.4 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 50/73 (68%), Positives = 62/73 (84%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             M++KF DV  FC  VSRLMV+++ +RASNQSTE AS AI KFLE+E +EE+SSGWMLL+T
Sbjct:   107 MSEKFWDVVAFCQQVSRLMVSEIRKRASNQSTEAASIAIVKFLEVETTEETSSGWMLLAT 166

Query:    61 LNLLAAGDVSLVE 73
             LNLLA GDVSL++
Sbjct:   167 LNLLANGDVSLIQ 179

GO:0007041 "lysosomal transport" evidence=ISS

GO:0030424 "axon" evidence=NAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0022416 "chaeta development" evidence=IGI

GO:0050807 "regulation of synapse organization" evidence=IGI

GO:0048749 "compound eye development" evidence=IMP

GO:0048786 "presynaptic active zone" evidence=IDA

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0031396 "regulation of protein ubiquitination" evidence=IMP

GO:0007409 "axonogenesis" evidence=IMP

RGD|1307097 Wdfy3 "WD repeat and FYVE domain containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKAVD 142

GO:0003831 "beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity" evidence=ISO

GO:0005545 "1-phosphatidylinositol binding" evidence=ISO

GO:0005635 "nuclear envelope" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0019898 "extrinsic to membrane" evidence=ISO

GO:0044444 "cytoplasmic part" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=ISO

MGI|MGI:1096875 Wdfy3 "WD repeat and FYVE domain containing 3" [Mus musculus (taxid:10090)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0003831 "beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity" evidence=IDA

GO:0005545 "1-phosphatidylinositol binding" evidence=ISO

GO:0005635 "nuclear envelope" evidence=ISA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005776 "autophagic vacuole" evidence=ISA

GO:0008152 "metabolic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0019898 "extrinsic to membrane" evidence=ISA

GO:0044444 "cytoplasmic part" evidence=ISA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1N6Q9 WDFY3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RLD7 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E1BRH2 WDFY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J9PB38 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q8IZQ1 WDFY3 "WD repeat and FYVE domain-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0046872 "metal ion binding" evidence=IEA

GO:0003831 "beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity" evidence=IEA

GO:0005545 "1-phosphatidylinositol binding" evidence=IDA

GO:0005635 "nuclear envelope" evidence=IDA

GO:0005776 "autophagic vacuole" evidence=IDA

GO:0019898 "extrinsic to membrane" evidence=IDA

GO:0044444 "cytoplasmic part" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E1BPS3 WDFY3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEINQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0005545 "1-phosphatidylinositol binding" evidence=IEA

GO:0003831 "beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1RW14 WDFY3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:     1 MTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLST 60
             MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI  SEE+S GWMLL+T
Sbjct:    70 MTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEIHQSEEASRGWMLLTT 129

Query:    61 LNLLAAGDVSLVE 73
             +NLLA+     V+
Sbjct:   130 INLLASSGQKTVD 142

GO:0019898 "extrinsic to membrane" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

GO:0005545 "1-phosphatidylinositol binding" evidence=IEA

GO:0003831 "beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6VNB8	WDFY3_MOUSE	No assigned EC number	0.6515	0.8684	0.0188	yes	N/A
Q8IZQ1	WDFY3_HUMAN	No assigned EC number	0.6515	0.8684	0.0187	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	76
KOG1788|consensus	2799		94.69
cd08818	88	CARD_MDA5_1 Caspase activation and recruitment dom	80.7

>KOG1788|consensus

Probab=94.69  E-value=0.01  Score=54.51  Aligned_cols=71  Identities=14%  Similarity=0.079  Sum_probs=61.2

Q ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHhhhhcccccchhHHHHHHHH-----HHhcCCcchhhcC
Q psy7100           2 TDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLN-----LLAAGDVSLVEEG   75 (76)
Q Consensus         2 v~~F~~i~~fa~~vs~~lv~EIr~ras~k~tE~A~~ai~~fL~~~~~e~~~~GwlLLksv~-----lLs~~d~~~v~~~   75 (76)
                      .++|++...|++..|...+.|+|+|+....|-++.+.|.+|+..   .+.-.||..||++.     |||+.+.-+++++
T Consensus        84 seeeKEaalnlTvlcfcrlvkvhanvdqlvTmlveqhIfsFvig---rafvkdyekLkagss~ganLLtaeevlmsgpa  159 (2799)
T KOG1788|consen   84 SEEEKEAALNLTVLCFCRLVKVHANVDQLVTMLVEQHIFSFVIG---RAFVKDYEKLKAGSSHGANLLTAEEVLMSGPA  159 (2799)
T ss_pred             cHHHHHHHHhhhheeeeeeeHHhhhhhhhhhhhhHhhHHHHhcC---ccccccchhhhccccccchhhhhhHHHhhCch
Confidence            47899999999999999999999999999999999999999965   56668899888874     7777776666543

>cd08818 CARD_MDA5_1 Caspase activation and recruitment domain found in MDA5, first repeat

Probab=80.70  E-value=2.8  Score=27.66  Aligned_cols=52  Identities=15%  Similarity=0.285  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHhhhhcccccchhHH--HHHHHH
Q psy7100           8 VHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWM--LLSTLN   62 (76)
Q Consensus         8 i~~fa~~vs~~lv~EIr~ras~k~tE~A~~ai~~fL~~~~~e~~~~Gwl--LLksv~   62 (76)
                      |.+|-..+..-.+.+||+...+++.-+|...+.+.|+.   ....-||-  +|.+++
T Consensus        24 VL~~l~~L~~e~ke~I~a~~~~~Gn~~AA~~LL~~l~~---~~~~~GWf~~FldAL~   77 (88)
T cd08818          24 VLDYLTFLEAEVKERIRAAAATRGNIAAAELLLSTLEK---GTWDPGWFREFVTALE   77 (88)
T ss_pred             HhhhcccCCHHHHHHHHHHHHccCcHHHHHHHHHHHHH---hccCCchHHHHHHHHH
Confidence            66677777788899999999999998898888888875   23457994  555543

Caspase activation and recruitment domain (CARD) found in MDA5 (melanoma-differentiation-associated gene 5), first repeat. MDA5, also known as IFIH1, contains two N-terminal CARD domains and a C-terminal RNA helicase domain. MDA5 is a cytoplasmic DEAD box RNA helicase that plays an important role in host antiviral response by sensing incoming viral RNA. Upon activation, the signal is transferred to downstream pathways via the adaptor molecule IPS-1 (MAVS, VISA, CARDIF), leading to the induction of type I interferons. Although very similar in sequence, MDA5 recognizes different sets of viruses compared to RIG-I, a related RNA helicase. MDA5 associates with IPS-1 through a CARD-CARD interaction. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00