Psyllid ID: psy713


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MYRGSGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
cccccHHHHHHHcHHHHHHcccccccccccccccccccHHHHHHHHHHHccccEEEccccccEEEEccccccHHHHHHHHHHHcccccccccccccHHHHHccccccEEEEEcHHHHHHHHHHHcccccHHHHHHHHHHHccEEEEEEEcHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHcHHHcccccccEEEHHHHHHHHHHHHHHHHHHHHcccc
ccccccEEEEEEcHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccEEcccccHHHHcccHHHHHHHHHHHHHHHHHcccccccccccccccccEEcccHHHHHccHHHHccccccccccccHHHHHHHccHccccEEEEEcHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHccccEEEccccHHHHccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHccccHHHHccccHHHcHHHHHHHHHHHHccHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHccc
myrgsgvnillITPEKAIKLAAndffrhpkmqkepknqstNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDffrhhlapsngeplslvrGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKtrlqnqtvgadgkkqyhsikispffvsagevvpkiSATSIALELVKTKGIVGlykgttatalrdvsFSVVYFPLFAqlnslgprkkdgsgeAAFYWSFLSGcisgsmaalsvnpfdVIKTRLQVLKKGqgelhyngvsdaiiEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
MYRGSGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNqtvgadgkkqyhSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
MYRGSGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLvnggiagiigvsvvFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
******VNILLITPEKAIKLAANDFFR************TNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGP*****SGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLG**
MYRGSGVNILLITPEKAIKLAAND*****************FICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQN***********************GEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPR*****GE*AFYWSFLSGCISGSMAALSVNPFDVIKTRL***************SDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
MYRGSGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
MYRGSGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooo
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MYRGSGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITANLLISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGVAENLLGIK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query378 2.2.26 [Sep-21-2011]
Q9H936323 Mitochondrial glutamate c yes N/A 0.669 0.783 0.430 2e-57
Q08DK4322 Mitochondrial glutamate c yes N/A 0.666 0.782 0.441 8e-57
Q9D6M3323 Mitochondrial glutamate c yes N/A 0.669 0.783 0.424 4e-56
Q5RD81323 Mitochondrial glutamate c yes N/A 0.669 0.783 0.424 5e-56
Q9H1K4315 Mitochondrial glutamate c no N/A 0.656 0.787 0.354 6e-49
Q505J6320 Mitochondrial glutamate c yes N/A 0.656 0.775 0.346 2e-48
Q9DB41320 Mitochondrial glutamate c no N/A 0.650 0.768 0.362 4e-45
Q12482902 Mitochondrial aspartate-g yes N/A 0.582 0.243 0.298 5e-24
Q75AH6911 Mitochondrial aspartate-g yes N/A 0.571 0.237 0.280 4e-20
Q54RB9772 Calcium-binding mitochond yes N/A 0.526 0.257 0.302 2e-18
>sp|Q9H936|GHC1_HUMAN Mitochondrial glutamate carrier 1 OS=Homo sapiens GN=SLC25A22 PE=1 SV=1 Back     alignment and function desciption
 Score =  223 bits (568), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 188/323 (58%), Gaps = 70/323 (21%)

Query: 55  LISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTP 114
           +  G+ VN+ L+TPEKAIKLAANDFFRH L+  +G+ L+L++ M AG  AG CQ+++TTP
Sbjct: 65  MYRGAAVNLTLVTPEKAIKLAANDFFRHQLS-KDGQKLTLLKEMLAGCGAGTCQVIVTTP 123

Query: 115 MELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSI 174
           ME+LKIQ+QDAGR+ AQ K++                       Q Q + A G  Q  S+
Sbjct: 124 MEMLKIQLQDAGRIAAQRKILAA---------------------QGQ-LSAQGGAQ-PSV 160

Query: 175 KISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLN 234
           +            P+ +AT +  +L++++GI GLYKG  AT LRDV FSVVYFPLFA LN
Sbjct: 161 E--------APAAPRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLN 212

Query: 235 SLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSD 294
            LG  +     ++ FY SFL+GC++GS AA++VNP DV+KTRLQ L++G  E  Y+G+ D
Sbjct: 213 QLG--RPASEEKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLQRGVNEDTYSGILD 270

Query: 295 AIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMV 354
              + L                                      +   AF KG  CR +V
Sbjct: 271 CARKILR------------------------------------HEGPSAFLKGAYCRALV 294

Query: 355 IAPLFGIAQMVYFLGVAENLLGI 377
           IAPLFGIAQ+VYFLG+AE+LLG+
Sbjct: 295 IAPLFGIAQVVYFLGIAESLLGL 317




Involved in the transport of glutamate across the inner mitochondrial membrane. Glutamate is cotransported with H(+).
Homo sapiens (taxid: 9606)
>sp|Q08DK4|GHC1_BOVIN Mitochondrial glutamate carrier 1 OS=Bos taurus GN=SLC25A22 PE=2 SV=1 Back     alignment and function description
>sp|Q9D6M3|GHC1_MOUSE Mitochondrial glutamate carrier 1 OS=Mus musculus GN=Slc25a22 PE=1 SV=1 Back     alignment and function description
>sp|Q5RD81|GHC1_PONAB Mitochondrial glutamate carrier 1 OS=Pongo abelii GN=SLC25A22 PE=2 SV=1 Back     alignment and function description
>sp|Q9H1K4|GHC2_HUMAN Mitochondrial glutamate carrier 2 OS=Homo sapiens GN=SLC25A18 PE=2 SV=1 Back     alignment and function description
>sp|Q505J6|GHC2_RAT Mitochondrial glutamate carrier 2 OS=Rattus norvegicus GN=Slc25a18 PE=2 SV=2 Back     alignment and function description
>sp|Q9DB41|GHC2_MOUSE Mitochondrial glutamate carrier 2 OS=Mus musculus GN=Slc25a18 PE=2 SV=4 Back     alignment and function description
>sp|Q12482|AGC1_YEAST Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGC1 PE=1 SV=1 Back     alignment and function description
>sp|Q75AH6|AGC1_ASHGO Mitochondrial aspartate-glutamate transporter AGC1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AGC1 PE=3 SV=2 Back     alignment and function description
>sp|Q54RB9|CMC_DICDI Calcium-binding mitochondrial carrier protein OS=Dictyostelium discoideum GN=mcfO PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
270006795260 hypothetical protein TcasGA2_TC013175 [T 0.632 0.919 0.490 4e-70
119114782305 AGAP010293-PA [Anopheles gambiae str. PE 0.629 0.780 0.489 6e-70
350409421312 PREDICTED: mitochondrial glutamate carri 0.629 0.762 0.436 2e-69
340713573312 PREDICTED: mitochondrial glutamate carri 0.629 0.762 0.433 1e-68
157128921315 mitochondrial glutamate carrier protein 0.632 0.758 0.487 2e-68
94469154315 mitochondrial solute carrier protein [Ae 0.632 0.758 0.484 3e-68
193627246320 PREDICTED: mitochondrial glutamate carri 0.616 0.728 0.424 6e-68
307171574307 Mitochondrial glutamate carrier 1 [Campo 0.629 0.775 0.431 7e-68
189237755312 PREDICTED: similar to mitochondrial glut 0.642 0.778 0.481 9e-67
391338958305 PREDICTED: mitochondrial glutamate carri 0.616 0.763 0.469 4e-66
>gi|270006795|gb|EFA03243.1| hypothetical protein TcasGA2_TC013175 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/324 (49%), Positives = 186/324 (57%), Gaps = 85/324 (26%)

Query: 55  LISGSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTP 114
           +  GS VNILLITPEKAIKLAANDFFRHHL    G  L + R MAA              
Sbjct: 21  MYRGSAVNILLITPEKAIKLAANDFFRHHLQTKEGT-LPMFRQMAA-------------- 65

Query: 115 MELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSI 174
                                 GG+AG   + +  P++L+K ++Q+    A   K     
Sbjct: 66  ----------------------GGLAGFCQIIITTPMELLKIQMQDAGRVAAAAK----- 98

Query: 175 KISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLN 234
                  SAG+VVPK +AT IAL+L K  GI+GLYKG  AT LRDV+FS+VYFPLFA LN
Sbjct: 99  -------SAGKVVPKTTATKIALDLFKKHGILGLYKGIGATMLRDVTFSIVYFPLFATLN 151

Query: 235 SLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSD 294
            LGPRK DGSGEA F+ SFLSGC +GS AAL VNP DV+KTRLQ L K +GE  Y+GVSD
Sbjct: 152 DLGPRKSDGSGEAVFWCSFLSGCAAGSFAALFVNPLDVVKTRLQALTKAEGERAYSGVSD 211

Query: 295 AIIEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMV 354
           AII+ +                                      +  LAFFKGGACRM+V
Sbjct: 212 AIIKTMKY------------------------------------EGPLAFFKGGACRMIV 235

Query: 355 IAPLFGIAQMVYFLGVAENLLGIK 378
           IAPLFGIAQMVY+LGVAE LLGIK
Sbjct: 236 IAPLFGIAQMVYYLGVAEALLGIK 259




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|119114782|ref|XP_554210.2| AGAP010293-PA [Anopheles gambiae str. PEST] gi|116118582|gb|EAL39319.2| AGAP010293-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|350409421|ref|XP_003488730.1| PREDICTED: mitochondrial glutamate carrier 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340713573|ref|XP_003395316.1| PREDICTED: mitochondrial glutamate carrier 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|157128921|ref|XP_001661549.1| mitochondrial glutamate carrier protein [Aedes aegypti] gi|108872424|gb|EAT36649.1| AAEL011276-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|94469154|gb|ABF18426.1| mitochondrial solute carrier protein [Aedes aegypti] Back     alignment and taxonomy information
>gi|193627246|ref|XP_001952292.1| PREDICTED: mitochondrial glutamate carrier 1-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307171574|gb|EFN63383.1| Mitochondrial glutamate carrier 1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|189237755|ref|XP_001812708.1| PREDICTED: similar to mitochondrial glutamate carrier protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|391338958|ref|XP_003743820.1| PREDICTED: mitochondrial glutamate carrier 1-like [Metaseiulus occidentalis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query378
ZFIN|ZDB-GENE-110408-61330 si:dkey-201c1.2 "si:dkey-201c1 0.412 0.472 0.5 2.4e-66
UNIPROTKB|E1C660322 SLC25A22 "Uncharacterized prot 0.452 0.531 0.443 8.8e-57
WB|WBGene00008979313 F20D1.9 [Caenorhabditis elegan 0.354 0.428 0.474 2.3e-56
FB|FBgn0037970319 CG12201 [Drosophila melanogast 0.362 0.429 0.464 7.8e-56
ZFIN|ZDB-GENE-040426-2745329 slc25a22 "solute carrier famil 0.447 0.513 0.435 9.9e-54
ZFIN|ZDB-GENE-040801-184331 zgc:92113 "zgc:92113" [Danio r 0.452 0.516 0.427 3.3e-53
UNIPROTKB|F1NEQ1303 SLC25A22 "Uncharacterized prot 0.439 0.547 0.432 3.3e-53
FB|FBgn0260743321 CG18347 [Drosophila melanogast 0.370 0.436 0.567 5.4e-53
UNIPROTKB|F1RYY8322 SLC25A22 "Uncharacterized prot 0.449 0.527 0.4 3.7e-52
UNIPROTKB|Q9H936323 SLC25A22 "Mitochondrial glutam 0.349 0.408 0.474 1.6e-51
ZFIN|ZDB-GENE-110408-61 si:dkey-201c1.2 "si:dkey-201c1.2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 340 (124.7 bits), Expect = 2.4e-66, Sum P(3) = 2.4e-66
 Identities = 81/162 (50%), Positives = 103/162 (63%)

Query:   164 GADGKKQYHSIKISPFFVSAGEVVPKISATSIAL--ELVKTKGIVGLYKGTTATALRDVS 221
             GA G+      K+ P  V+ G  V   S T++ L  +L+K KGI GLYKG  AT LRDV 
Sbjct:   148 GARGEAAAQR-KLMPQAVTPGGPVEMKSPTAMQLTRQLLKEKGIAGLYKGLGATLLRDVP 206

Query:   222 FSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLK 281
             FS++YFPLFA LN+LG  KK G G A FY SF+SGCI+GS AA++VNP DVIKTRLQ L 
Sbjct:   207 FSIIYFPLFANLNNLG--KKGGDGPAPFYVSFISGCIAGSTAAVAVNPVDVIKTRLQSLT 264

Query:   282 KGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIVITTPM 323
             +G  E  Y+GV+D I + L    G AA      C+ ++  P+
Sbjct:   265 RGSEEDSYSGVTDCIRKILRN-EGPAAFLKGAYCRALVIAPL 305


GO:0055085 "transmembrane transport" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0006810 "transport" evidence=IEA
UNIPROTKB|E1C660 SLC25A22 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00008979 F20D1.9 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0037970 CG12201 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2745 slc25a22 "solute carrier family 25 (mitochondrial carrier: glutamate), member 22" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-184 zgc:92113 "zgc:92113" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NEQ1 SLC25A22 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0260743 CG18347 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1RYY8 SLC25A22 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9H936 SLC25A22 "Mitochondrial glutamate carrier 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q08DK4GHC1_BOVINNo assigned EC number0.44130.66660.7826yesN/A
Q505J6GHC2_RATNo assigned EC number0.34660.65600.775yesN/A
Q5RD81GHC1_PONABNo assigned EC number0.42410.66930.7832yesN/A
Q9D6M3GHC1_MOUSENo assigned EC number0.42410.66930.7832yesN/A
Q9H936GHC1_HUMANNo assigned EC number0.43030.66930.7832yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-14
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-09
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 6e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.003
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 20/105 (19%)

Query: 132 AKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKIS 191
           A L+ GGIAG I  +V +PLD+VKTRLQ+   G  G ++Y  I                 
Sbjct: 7   ASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAG--GSRKYKGI----------------- 47

Query: 192 ATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSL 236
                 ++ K +GI GLYKG     LR    + +YF  +  L  L
Sbjct: 48  -LDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKL 91


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 378
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
KOG0754|consensus294 100.0
KOG0753|consensus317 100.0
KOG0758|consensus297 100.0
KOG0757|consensus319 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760|consensus302 100.0
KOG0762|consensus311 100.0
KOG0759|consensus286 100.0
KOG0751|consensus694 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0761|consensus361 100.0
KOG0750|consensus304 100.0
KOG0749|consensus298 100.0
KOG0036|consensus463 100.0
KOG0768|consensus323 100.0
KOG0756|consensus299 100.0
KOG0766|consensus297 100.0
KOG0769|consensus308 100.0
KOG0770|consensus353 100.0
KOG0763|consensus301 100.0
KOG0765|consensus333 100.0
KOG0755|consensus320 100.0
KOG0764|consensus299 100.0
KOG0753|consensus317 100.0
KOG0767|consensus333 99.98
KOG0752|consensus 320 99.98
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.97
KOG0757|consensus319 99.97
KOG0760|consensus302 99.97
KOG0759|consensus286 99.96
KOG0758|consensus297 99.96
KOG0754|consensus294 99.95
PTZ00168259 mitochondrial carrier protein; Provisional 99.95
KOG0770|consensus353 99.95
KOG0762|consensus 311 99.95
KOG0751|consensus694 99.94
KOG0769|consensus308 99.94
KOG0768|consensus323 99.93
KOG0761|consensus 361 99.93
KOG0036|consensus463 99.93
KOG0749|consensus298 99.9
KOG0755|consensus320 99.9
KOG0765|consensus333 99.9
KOG0766|consensus 297 99.89
KOG0767|consensus 333 99.87
KOG0756|consensus299 99.87
KOG0750|consensus304 99.86
KOG0763|consensus301 99.85
KOG1519|consensus297 99.77
KOG2745|consensus321 99.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.62
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.53
KOG2745|consensus321 99.51
KOG1519|consensus297 99.45
KOG2954|consensus427 99.43
KOG2954|consensus427 98.45
>KOG0752|consensus Back     alignment and domain information
Probab=100.00  E-value=3.5e-52  Score=382.86  Aligned_cols=267  Identities=20%  Similarity=0.313  Sum_probs=228.2

Q ss_pred             cccceeccChhHHHhhhhhhhhcCCCCCCCCCCCCchHHHHhhhhcccc---cccccccchhhhhhhhhhHHHHhHHHHH
Q psy713            5 SGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITAN---LLISGSGVNILLITPEKAIKLAANDFFR   81 (378)
Q Consensus         5 ~~~~~~~~~Pld~iK~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~i~r~e---glyrG~~~~~~~~~~~~~~~f~~y~~~k   81 (378)
                      ++++..++.|||+||+|+|.+.++    .....+.|+++.++ +|+++|   |||||+.+++++.+|+.+++|.+||+++
T Consensus        38 Gavsrt~~APLd~iKIlfQ~~~~~----~~~~k~~g~~~~~~-~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k  112 (320)
T KOG0752|consen   38 GAVSRTVTAPLDRIKILFQVQVEP----SKTSKYPGVIQAFK-SIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYK  112 (320)
T ss_pred             HHHHHHhcCchhHceEEEEecccc----ccccccccHHHHHH-HHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhh
Confidence            567889999999999999976433    33467889999999 999999   9999999999999999999999999999


Q ss_pred             Hhhc-CCCCCCcchhHHHHHhhhhhHHHHHhhcchHHHHHHHHhcccchhhhhHHhhhhHHHHHHHhhchHHHHHHHHHh
Q psy713           82 HHLA-PSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQN  160 (378)
Q Consensus        82 ~~~~-~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~~g~~a~~~~~~~~~P~d~vk~rlq~  160 (378)
                      +... .+.....++...++||++||++++++++|+|++|+|+-.+.+.                                
T Consensus       113 ~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~--------------------------------  160 (320)
T KOG0752|consen  113 KLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGEL--------------------------------  160 (320)
T ss_pred             hhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeeccc--------------------------------
Confidence            8432 2222267788888899999988888888887777777554321                                


Q ss_pred             ccCCCCCCcccccccccccccccCCccCcccHHHHHHHHHHhcCccccccccchhhhhhccchhhHHHHHHHHHhhCCCC
Q psy713          161 QTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRK  240 (378)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~~~~G~~glyrG~~~~~l~~~~~~~i~f~~ye~lk~~l~~~  240 (378)
                                                ..|++..+++++|+++||++|||||+.|++++.+|+.++.|.+||.+|.+....
T Consensus       161 --------------------------~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~  214 (320)
T KOG0752|consen  161 --------------------------KVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLK  214 (320)
T ss_pred             --------------------------ccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhccc
Confidence                                      136699999999999999999999999999999999999999999999952222


Q ss_pred             CCCCCCchHHHHHHHHHHHhHhhhhccccHHHHHHHHhhcccC--CCccccCcHHHHHHHHHHHHHHHHHHHHHhHhHhH
Q psy713          241 KDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKG--QGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIV  318 (378)
Q Consensus       241 ~~~~~~~~~~~~~~~g~~ag~~a~~v~~Pldvvk~r~q~~~~~--~~~~~y~~~~~~~~~i~~~~~G~~~~~~~~~~~~~  318 (378)
                      ..++.+.+.+..+++|++||+++++++||||+||+|||+.+..  ....+|.+++||+++|++                 
T Consensus       215 ~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~-----------------  277 (320)
T KOG0752|consen  215 SSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVK-----------------  277 (320)
T ss_pred             ccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHHHHHH-----------------
Confidence            2333577889999999999999999999999999999998742  233456899999999999                 


Q ss_pred             hcCcHHHHHHHHhccchhhhhcccccccchhhhHHHhhcccchhhHhhHHHH
Q psy713          319 ITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGV  370 (378)
Q Consensus       319 ~~~P~d~ir~r~q~~~~~~~eG~~g~y~G~~~~llr~~~~~~i~~~~ye~~~  370 (378)
                                         +||+.|||||+.|++++.+|+++++|++||...
T Consensus       278 -------------------~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye~~k  310 (320)
T KOG0752|consen  278 -------------------TEGVKGLYKGLSPNLLKVVPSVAISFTTYEILK  310 (320)
T ss_pred             -------------------HhhhhhhhccccHHHHHhcccceeeeehHHHHH
Confidence                               999999999999999999999999999999765



>KOG0764|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 71/184 (38%), Gaps = 18/184 (9%) Query: 149 FPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGL 208 FPLD K RLQ Q G+ Q V L +V+T+G L Sbjct: 20 FPLDTAKVRLQIQ-----GESQ--------GLVRTAASAQYRGVLGTILTMVRTEGPRSL 66 Query: 209 YKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSFLSGCISGSMAALSVN 268 Y G A R +SF+ V L+ +S+ GS A L+G +G++A Sbjct: 67 YNGLVAGLQRQMSFASVRIGLY---DSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQ 123 Query: 269 PFDVIKTRLQVLKKGQGELHYNGVSDA--IIEPLSLVRGMAAGGLAGLCQIVITTPMELL 326 P DV+K R Q + G Y +A I +RG+ G + + I EL+ Sbjct: 124 PTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELV 183 Query: 327 KIQM 330 + Sbjct: 184 TYDL 187

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query378
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-35
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-22
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-07
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-28
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-22
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  131 bits (331), Expect = 1e-35
 Identities = 43/240 (17%), Positives = 82/240 (34%), Gaps = 55/240 (22%)

Query: 58  GSGVNILLITPEKAIKLAANDFFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMEL 117
           G+  N++   P +A+  A  D ++              R  A                  
Sbjct: 72  GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFA------------------ 113

Query: 118 LKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKIS 177
                   G + +      GG AG   +  V+PLD  +TRL         ++++  +   
Sbjct: 114 --------GNLAS------GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGL--- 156

Query: 178 PFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLG 237
                 G  + KI          K+ G+ GLY+G   +    + +   YF ++     + 
Sbjct: 157 ------GNCITKI---------FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGML 201

Query: 238 PRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQV-LKKGQGELHYNGVSDAI 296
           P  K+         S++      ++A L   PFD ++ R+ +   +   ++ Y G  D  
Sbjct: 202 PDPKNVH----IIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCW 257


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.98
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.97
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.3e-48  Score=368.36  Aligned_cols=268  Identities=14%  Similarity=0.172  Sum_probs=225.6

Q ss_pred             CcccceeccChhHHHhhhhhhhhcCCCC--CCCCCCCCchHHHHhhhhcccc---cccccccchhhhhhhhhhHHHHhHH
Q psy713            4 GSGVNILLITPEKAIKLAANDFFRHPKM--QKEPKNQSTNFICLACQTITAN---LLISGSGVNILLITPEKAIKLAAND   78 (378)
Q Consensus         4 g~~~~~~~~~Pld~iK~~~Q~~~~~~~~--~~~~~~~~~~~~~~~~~i~r~e---glyrG~~~~~~~~~~~~~~~f~~y~   78 (378)
                      +++++.++++|||+||+|+|.+......  ......|.+++++++ +|+|+|   +||||+.+++++.+|..+++|.+||
T Consensus        11 ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye   89 (303)
T 2lck_A           11 AACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTIL-TMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYD   89 (303)
T ss_dssp             HHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHH-HHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHH
T ss_pred             HHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHH-HHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence            3567789999999999999975321100  011346889999999 999999   9999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCcchhHHHHHhhhhhHHHHHhhcchHHHHHHHHhcccchhhhhHHhhhhHHHHHHHhhchHHHHHHHH
Q psy713           79 FFRHHLAPSNGEPLSLVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKTRL  158 (378)
Q Consensus        79 ~~k~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~~g~~a~~~~~~~~~P~d~vk~rl  158 (378)
                      .+|+.+..... ..+....+++|++||+++.++++|+|++|+|+|.+...                              
T Consensus        90 ~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~------------------------------  138 (303)
T 2lck_A           90 SVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA------------------------------  138 (303)
T ss_dssp             HHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC------------------------------
T ss_pred             HHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc------------------------------
Confidence            99999875532 35667778888888888887777777777777765321                              


Q ss_pred             HhccCCCCCCcccccccccccccccCCccCcccHHHHHHHHHHhcCccccccccchhhhhhccchhhHHHHHHHHHhhCC
Q psy713          159 QNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGP  238 (378)
Q Consensus       159 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~~~~G~~glyrG~~~~~l~~~~~~~i~f~~ye~lk~~l~  238 (378)
                            .                   ....|++.++++++|+++||++|||||+.|++++.+++.+++|.+||.+|+.+.
T Consensus       139 ------~-------------------~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~  193 (303)
T 2lck_A          139 ------G-------------------GGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLL  193 (303)
T ss_dssp             ------C-------------------CSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ------C-------------------CCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  0                   012466999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCchHHHHHHHHHHHhHhhhhccccHHHHHHHHhhcccCCCccccCcHHHHHHHHHHHHHHHHHHHHHhHhHhH
Q psy713          239 RKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQGELHYNGVSDAIIEPLSLVRGMAAGGLAGLCQIV  318 (378)
Q Consensus       239 ~~~~~~~~~~~~~~~~~g~~ag~~a~~v~~Pldvvk~r~q~~~~~~~~~~y~~~~~~~~~i~~~~~G~~~~~~~~~~~~~  318 (378)
                      ...  ....+...++++|++||++++++++|+||||+|+|++..    ..|.++++|+++|++                 
T Consensus       194 ~~~--~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~----~~y~~~~~~~~~i~~-----------------  250 (303)
T 2lck_A          194 KAN--LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL----GQYHSAGHCALTMLR-----------------  250 (303)
T ss_dssp             TTT--SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS----SSCCSHHHHHHHHHH-----------------
T ss_pred             hcc--CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc----cccCCHHHHHHHHHH-----------------
Confidence            432  224457788999999999999999999999999999743    369999999999999                 


Q ss_pred             hcCcHHHHHHHHhccchhhhhcccccccchhhhHHHhhcccchhhHhhHHHH
Q psy713          319 ITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFLGV  370 (378)
Q Consensus       319 ~~~P~d~ir~r~q~~~~~~~eG~~g~y~G~~~~llr~~~~~~i~~~~ye~~~  370 (378)
                                         +||++|||||+.++++|.+|.++++|.+||...
T Consensus       251 -------------------~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k  283 (303)
T 2lck_A          251 -------------------KEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLK  283 (303)
T ss_dssp             -------------------SSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------------HcChHHhhccHHHHHHHHHhHHHHHHHHHHHHH
Confidence                               999999999999999999999999999999764



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 378
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-10
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-08
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-06
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 0.001
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 58.2 bits (139), Expect = 4e-10
 Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 15/164 (9%)

Query: 134 LVNGGIAGIIGVSVVFPLDLVKTRLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISAT 193
            + GG+A  I  + V P++ VK  LQ Q        +         +    + V +I   
Sbjct: 10  FLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQ-------YKGIIDCVVRIPKE 62

Query: 194 SIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSLGPRKKDGSGEAAFYWSF 253
              L   +      +    T             F    +   LG   +       F  + 
Sbjct: 63  QGFLSFWRGNLANVIRYFPT-------QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNL 115

Query: 254 LSGCISGSMAALSVNPFDVIKTRLQV-LKKGQGELHYNGVSDAI 296
            SG  +G+ +   V P D  +TRL   + KG  +  + G+ + I
Sbjct: 116 ASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCI 159


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query378
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.96
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.4e-44  Score=336.16  Aligned_cols=268  Identities=16%  Similarity=0.282  Sum_probs=217.3

Q ss_pred             CcccceeccChhHHHhhhhhhhhcCCCCCCCCCCCCchHHHHhhhhcccc---cccccccchhhhhhhhhhHHHHhHHHH
Q psy713            4 GSGVNILLITPEKAIKLAANDFFRHPKMQKEPKNQSTNFICLACQTITAN---LLISGSGVNILLITPEKAIKLAANDFF   80 (378)
Q Consensus         4 g~~~~~~~~~Pld~iK~~~Q~~~~~~~~~~~~~~~~~~~~~~~~~i~r~e---glyrG~~~~~~~~~~~~~~~f~~y~~~   80 (378)
                      +++++.+++||||+||+|+|++..+.. ......++|++++++ +++++|   +||||+.+.++...+...++|.+||.+
T Consensus        16 a~~i~~~~~~Pld~iK~r~Q~~~~~~~-~~~~~~~~~~~~~~~-~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~   93 (292)
T d1okca_          16 AAAISKTAVAPIERVKLLLQVQHASKQ-ISAEKQYKGIIDCVV-RIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKY   93 (292)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHGGGCSS-CCGGGSCCSHHHHHH-HHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhHHHHHHHHHhcCCCCCC-CCcccccCCHHHHHH-HHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHH
Confidence            356788999999999999999765542 334457899999999 999999   899999999999999999999999999


Q ss_pred             HHhhcCCCCCCcc----hhHHHHHhhhhhHHHHHhhcchHHHHHHHHhcccchhhhhHHhhhhHHHHHHHhhchHHHHHH
Q psy713           81 RHHLAPSNGEPLS----LVRGMAAGGLAGLCQIVITTPMELLKIQMQDAGRVMAQAKLVNGGIAGIIGVSVVFPLDLVKT  156 (378)
Q Consensus        81 k~~~~~~~~~~~~----~~~~~~ag~~ag~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~~g~~a~~~~~~~~~P~d~vk~  156 (378)
                      ++.+.....+..+    ....+++|..||+++.++++|+|++|+|+|                                 
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~---------------------------------  140 (292)
T d1okca_          94 KQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLA---------------------------------  140 (292)
T ss_dssp             HHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------
T ss_pred             HHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeee---------------------------------
Confidence            9998765542222    233344555555555555555555555554                                 


Q ss_pred             HHHhccCCCCCCcccccccccccccccCCccCcccHHHHHHHHHHhcCccccccccchhhhhhccchhhHHHHHHHHHhh
Q psy713          157 RLQNQTVGADGKKQYHSIKISPFFVSAGEVVPKISATSIALELVKTKGIVGLYKGTTATALRDVSFSVVYFPLFAQLNSL  236 (378)
Q Consensus       157 rlq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~~~~G~~glyrG~~~~~l~~~~~~~i~f~~ye~lk~~  236 (378)
                         .+......                  .+.|.+..+.++.++++||+++||+|+.+++++.+++++++|..||.+|+.
T Consensus       141 ---~~~~~~~~------------------~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~  199 (292)
T d1okca_         141 ---ADVGKGAA------------------QREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM  199 (292)
T ss_dssp             ---HCCCSSTT------------------TCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ---cccccccc------------------ccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhh
Confidence               44322211                  123559999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCchHHHHHHHHHHHhHhhhhccccHHHHHHHHhhcccCCC-ccccCcHHHHHHHHHHHHHHHHHHHHHhHh
Q psy713          237 GPRKKDGSGEAAFYWSFLSGCISGSMAALSVNPFDVIKTRLQVLKKGQG-ELHYNGVSDAIIEPLSLVRGMAAGGLAGLC  315 (378)
Q Consensus       237 l~~~~~~~~~~~~~~~~~~g~~ag~~a~~v~~Pldvvk~r~q~~~~~~~-~~~y~~~~~~~~~i~~~~~G~~~~~~~~~~  315 (378)
                      +.+    .........++++.+++.++++++||+||||+|||.+..... ...|.++++|++++++              
T Consensus       200 ~~~----~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~--------------  261 (292)
T d1okca_         200 LPD----PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAK--------------  261 (292)
T ss_dssp             SCG----GGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHH--------------
T ss_pred             ccc----ccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH--------------
Confidence            763    234457888999999999999999999999999999865432 4579999999999999              


Q ss_pred             HhHhcCcHHHHHHHHhccchhhhhcccccccchhhhHHHhhcccchhhHhhHH
Q psy713          316 QIVITTPMELLKIQMQDAGRVMAQAKLAFFKGGACRMMVIAPLFGIAQMVYFL  368 (378)
Q Consensus       316 ~~~~~~P~d~ir~r~q~~~~~~~eG~~g~y~G~~~~llr~~~~~~i~~~~ye~  368 (378)
                                            +||++|||||+.++++|.++ ++++|++||.
T Consensus       262 ----------------------~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~  291 (292)
T d1okca_         262 ----------------------DEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE  291 (292)
T ss_dssp             ----------------------HHCGGGGGTTHHHHHHHHHH-HHHHHHHHHT
T ss_pred             ----------------------hcCcCcccccHHHHHHHHHH-HHhhhhHhhc
Confidence                                  99999999999999999866 6899999984



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure