Psyllid ID: psy7235
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 305 | ||||||
| 91080827 | 670 | PREDICTED: similar to soluble guanylyl c | 0.865 | 0.394 | 0.665 | 1e-113 | |
| 328717516 | 601 | PREDICTED: head-specific guanylate cycla | 0.865 | 0.439 | 0.661 | 1e-111 | |
| 345491970 | 722 | PREDICTED: head-specific guanylate cycla | 0.865 | 0.365 | 0.655 | 1e-110 | |
| 333033747 | 702 | soluble guanylyl cyclase alpha-1 subunit | 0.865 | 0.376 | 0.647 | 1e-109 | |
| 307174201 | 553 | Head-specific guanylate cyclase [Campono | 0.865 | 0.477 | 0.641 | 1e-108 | |
| 332025314 | 631 | Head-specific guanylate cyclase [Acromyr | 0.865 | 0.418 | 0.641 | 1e-108 | |
| 307210703 | 598 | Head-specific guanylate cyclase [Harpegn | 0.865 | 0.441 | 0.638 | 1e-107 | |
| 322794614 | 712 | hypothetical protein SINV_08279 [Solenop | 0.940 | 0.403 | 0.604 | 1e-106 | |
| 383855632 | 702 | PREDICTED: head-specific guanylate cycla | 0.862 | 0.374 | 0.631 | 1e-103 | |
| 380019972 | 700 | PREDICTED: head-specific guanylate cycla | 0.862 | 0.375 | 0.638 | 1e-103 |
| >gi|91080827|ref|XP_970511.1| PREDICTED: similar to soluble guanylyl cyclase alpha-1 subunit [Tribolium castaneum] gi|270005900|gb|EFA02348.1| hypothetical protein TcasGA2_TC008018 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/296 (66%), Positives = 228/296 (77%), Gaps = 32/296 (10%)
Query: 8 SKLTDGLRRRMDKLKSSIEEANQAVDQERETNVSLLHMIFPPDIAKRLWLGESIEAKTHE 67
++ DGLRRRMDKLKSSIEE N+AVD+ERE NVSLLH+IFPPDIAKRLWLG++IEAKTHE
Sbjct: 400 ARAQDGLRRRMDKLKSSIEEGNRAVDKEREKNVSLLHLIFPPDIAKRLWLGQTIEAKTHE 459
Query: 68 HVTMLFSDIVGFTSICSTATPFMVISMLENLYNKFDAFCGQLDVYKVETIGDAYCVAGGL 127
VTMLFSDIVGFTSICST TP MVI+ML++LYN+FD FCGQLDVYKVETIGDAYCVAGGL
Sbjct: 460 DVTMLFSDIVGFTSICSTTTPMMVINMLQDLYNQFDVFCGQLDVYKVETIGDAYCVAGGL 519
Query: 128 HKTQSTHAQRIAWMALKMIHTCASHSTHDGKPIKLRVSTLLQVRVLRPAVVLKMRWIDDS 187
HK THA +IAWMALKMI TC+ H TH G+PI+
Sbjct: 520 HKETDTHALQIAWMALKMIDTCSHHHTHQGQPIR-------------------------- 553
Query: 188 HLAVFQMRIGLHTGTVLAGVVGVKMPRYCLFGHNVTVANKFESGSEPLRINISPTTYECL 247
MRIGLHTG+VLAGVVGVKMPRYC+FGHNVT+ANKFESGSEPLRIN+SPTTYE L
Sbjct: 554 ------MRIGLHTGSVLAGVVGVKMPRYCMFGHNVTIANKFESGSEPLRINVSPTTYERL 607
Query: 248 RNTEHFTFEPRSRELLPKGFPENIPGICYFVNDYRHPSLPSEEPLEKHIDRAVEDL 303
E F E R R LPK FP NIPG C+F++DY+HP+LP + L +HI+ ++++
Sbjct: 608 AAFEGFRLEARERSCLPKDFPANIPGTCHFLSDYKHPALPPDAALTQHIEAGLKEI 663
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328717516|ref|XP_001944860.2| PREDICTED: head-specific guanylate cyclase-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|345491970|ref|XP_001602491.2| PREDICTED: head-specific guanylate cyclase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|333033747|dbj|BAK23250.1| soluble guanylyl cyclase alpha-1 subunit [Gryllus bimaculatus] | Back alignment and taxonomy information |
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| >gi|307174201|gb|EFN64846.1| Head-specific guanylate cyclase [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|332025314|gb|EGI65482.1| Head-specific guanylate cyclase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|307210703|gb|EFN87126.1| Head-specific guanylate cyclase [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|322794614|gb|EFZ17622.1| hypothetical protein SINV_08279 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|383855632|ref|XP_003703314.1| PREDICTED: head-specific guanylate cyclase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|380019972|ref|XP_003693873.1| PREDICTED: head-specific guanylate cyclase-like [Apis florea] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 305 | ||||||
| FB|FBgn0013972 | 676 | Gycalpha99B "Guanylyl cyclase | 0.567 | 0.255 | 0.655 | 8e-91 | |
| UNIPROTKB|E2RNY9 | 738 | GUCY1A2 "Uncharacterized prote | 0.514 | 0.212 | 0.547 | 5.5e-79 | |
| UNIPROTKB|E1BP75 | 730 | GUCY1A2 "Uncharacterized prote | 0.514 | 0.215 | 0.547 | 7.6e-79 | |
| UNIPROTKB|P33402 | 732 | GUCY1A2 "Guanylate cyclase sol | 0.514 | 0.214 | 0.547 | 1e-78 | |
| UNIPROTKB|B7ZLT5 | 753 | GUCY1A2 "GUCY1A2 protein" [Hom | 0.514 | 0.208 | 0.547 | 1.5e-78 | |
| UNIPROTKB|F1MA43 | 333 | Gucy1a2 "Guanylate cyclase sol | 0.514 | 0.471 | 0.541 | 1.7e-78 | |
| UNIPROTKB|F1PI77 | 739 | GUCY1A2 "Uncharacterized prote | 0.514 | 0.212 | 0.547 | 2.4e-78 | |
| MGI|MGI:1926562 | 691 | Gucy1a3 "guanylate cyclase 1, | 0.567 | 0.250 | 0.517 | 1.2e-77 | |
| RGD|621655 | 730 | Gucy1a2 "guanylate cyclase 1, | 0.514 | 0.215 | 0.541 | 1.7e-77 | |
| UNIPROTKB|E1C0P0 | 724 | GUCY1A2 "Uncharacterized prote | 0.514 | 0.216 | 0.554 | 2.3e-77 |
| FB|FBgn0013972 Gycalpha99B "Guanylyl cyclase alpha-subunit at 99B" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 578 (208.5 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 114/174 (65%), Positives = 134/174 (77%)
Query: 8 SKLTDGLRRRMDKLKSSIEEANQAVDQERETNVSLLHMIFPPDIAKRLWLGESIEAKTHE 67
++ DGLRRRMDK+K+SIEEAN AV +ER+ NVSLLH+IFP +IA++LWLG SI+AKT+
Sbjct: 404 ARAQDGLRRRMDKIKNSIEEANSAVTKERKKNVSLLHLIFPAEIAEKLWLGSSIDAKTYP 463
Query: 68 HVTMLFSDIVGFTSICSTATPFMVISMLENLYNKFDAFCGQLDVYKVETIGDAYCVAGGL 127
VT+LFSDIVGFTSICS ATPFMVISMLE LY FD FC DVYKVETIGDAYCVA GL
Sbjct: 464 DVTILFSDIVGFTSICSRATPFMVISMLEGLYKDFDEFCDFFDVYKVETIGDAYCVASGL 523
Query: 128 HKTQSTHAQRIAWMALKMIHTCASHSTHDGKPIKLRVSTLLQVRVLRPAVVLKM 181
H+ A ++AWMALKMI C+ H THDG+ IK+R+ L VL V KM
Sbjct: 524 HRASIYDAHKVAWMALKMIDACSKHITHDGEQIKMRIG-LHTGTVLAGVVGRKM 576
|
|
| UNIPROTKB|E2RNY9 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BP75 GUCY1A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P33402 GUCY1A2 "Guanylate cyclase soluble subunit alpha-2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B7ZLT5 GUCY1A2 "GUCY1A2 protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MA43 Gucy1a2 "Guanylate cyclase soluble subunit alpha-2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PI77 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1926562 Gucy1a3 "guanylate cyclase 1, soluble, alpha 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|621655 Gucy1a2 "guanylate cyclase 1, soluble, alpha 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C0P0 GUCY1A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 305 | |||
| smart00044 | 194 | smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca | 2e-72 | |
| pfam00211 | 184 | pfam00211, Guanylate_cyc, Adenylate and Guanylate | 1e-69 | |
| cd07302 | 177 | cd07302, CHD, cyclase homology domain | 4e-50 | |
| cd07556 | 133 | cd07556, Nucleotidyl_cyc_III, Class III nucleotidy | 2e-20 | |
| COG2114 | 227 | COG2114, CyaA, Adenylate cyclase, family 3 (some p | 1e-14 | |
| pfam07701 | 209 | pfam07701, HNOBA, Heme NO binding associated | 5e-11 |
| >gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain | Back alignment and domain information |
|---|
Score = 220 bits (564), Expect = 2e-72
Identities = 86/225 (38%), Positives = 125/225 (55%), Gaps = 36/225 (16%)
Query: 35 ERETNVSLLHMIFPPDIAKRLWLGESIE-AKTHEHVTMLFSDIVGFTSICSTATPFMVIS 93
E++ LL + P +A++L G S A+++++VT+LFSDIVGFTS+CST+TP V++
Sbjct: 2 EKKKTDRLLDQLLPASVAEQLKRGGSPVPAESYDNVTILFSDIVGFTSLCSTSTPEQVVN 61
Query: 94 MLENLYNKFDAFCGQLDVYKVETIGDAYCVAGGL-HKTQSTHAQRIAWMALKMIHTCASH 152
+L +LY++FD + YKV+TIGDAY VA GL + HA+ IA AL M+ +
Sbjct: 62 LLNDLYSRFDQIIDRHGGYKVKTIGDAYMVASGLPEEALVDHAELIADEALDMVEELKTV 121
Query: 153 -STHDGKPIKLRVSTLLQVRVLRPAVVLKMRWIDDSHLAVFQMRIGLHTGTVLAGVVGVK 211
H + ++RIG+HTG V+AGVVG++
Sbjct: 122 LVQHREEG--------------------------------LRVRIGIHTGPVVAGVVGIR 149
Query: 212 MPRYCLFGHNVTVANKFESGSEPLRINISPTTYECL-RNTEHFTF 255
MPRYCLFG V +A++ ES +P +I +S TY L R F F
Sbjct: 150 MPRYCLFGDTVNLASRMESAGDPGQIQVSEETYSLLARRGGQFVF 194
|
Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes. Length = 194 |
| >gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|143636 cd07302, CHD, cyclase homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|143637 cd07556, Nucleotidyl_cyc_III, Class III nucleotidyl cyclases | Back alignment and domain information |
|---|
| >gnl|CDD|225025 COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|219526 pfam07701, HNOBA, Heme NO binding associated | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| KOG4171|consensus | 671 | 100.0 | ||
| PF00211 | 184 | Guanylate_cyc: Adenylate and Guanylate cyclase cat | 100.0 | |
| smart00044 | 194 | CYCc Adenylyl- / guanylyl cyclase, catalytic domai | 100.0 | |
| KOG3619|consensus | 867 | 100.0 | ||
| KOG1023|consensus | 484 | 100.0 | ||
| KOG3619|consensus | 867 | 100.0 | ||
| COG2114 | 227 | CyaA Adenylate cyclase, family 3 (some proteins co | 100.0 | |
| KOG3618|consensus | 1318 | 100.0 | ||
| cd07302 | 177 | CHD cyclase homology domain. Catalytic domains of | 100.0 | |
| KOG3618|consensus | 1318 | 99.96 | ||
| cd07556 | 133 | Nucleotidyl_cyc_III Class III nucleotidyl cyclases | 99.48 | |
| PF05165 | 246 | GGDN: GGDN family; InterPro: IPR007839 GTP cyclohy | 96.1 | |
| PRK09966 | 407 | putative inner membrane diguanylate cyclase; Provi | 95.5 | |
| PF00990 | 161 | GGDEF: GGDEF domain; InterPro: IPR000160 This doma | 95.18 | |
| PRK10245 | 366 | adrA diguanylate cyclase AdrA; Provisional | 94.95 | |
| PRK11059 | 640 | regulatory protein CsrD; Provisional | 94.81 | |
| PRK09894 | 296 | diguanylate cyclase; Provisional | 94.79 | |
| smart00267 | 163 | GGDEF diguanylate cyclase. Diguanylate cyclase, pr | 94.32 | |
| COG2199 | 181 | c-di-GMP synthetase (diguanylate cyclase, GGDEF do | 94.27 | |
| COG3706 | 435 | PleD Response regulator containing a CheY-like rec | 94.17 | |
| COG2429 | 250 | Archaeal GTP cyclohydrolase III [Nucleotide transp | 93.93 | |
| PRK11829 | 660 | biofilm formation regulator HmsP; Provisional | 92.83 | |
| PRK13561 | 651 | putative diguanylate cyclase; Provisional | 92.64 | |
| cd01949 | 158 | GGDEF Diguanylate-cyclase (DGC) or GGDEF domain. D | 92.26 | |
| PRK02240 | 254 | GTP cyclohydrolase III; Provisional | 91.24 | |
| TIGR02577 | 482 | cas_TM1794_Crm2 CRISPR-associated protein, Crm2 fa | 90.61 | |
| PRK14538 | 838 | putative bifunctional signaling protein/50S riboso | 89.5 | |
| PRK15426 | 570 | putative diguanylate cyclase YedQ; Provisional | 88.82 | |
| COG3887 | 655 | Predicted signaling protein consisting of a modifi | 88.08 | |
| TIGR00254 | 165 | GGDEF diguanylate cyclase (GGDEF) domain. The GGDE | 88.0 | |
| PF10851 | 116 | DUF2652: Protein of unknown function (DUF2652) ; I | 81.7 | |
| PRK02240 | 254 | GTP cyclohydrolase III; Provisional | 80.13 | |
| TIGR02578 | 648 | cas_TM1811_Csm1 CRISPR-associated protein, Csm1 fa | 80.07 |
| >KOG4171|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-50 Score=386.71 Aligned_cols=254 Identities=44% Similarity=0.740 Sum_probs=239.7
Q ss_pred CcccCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHhcCCcccccccCcEEEEEEeccCcc
Q psy7235 1 MELSSPGSKLTDGLRRRMDKLKSSIEEANQAVDQERETNVSLLHMIFPPDIAKRLWLGESIEAKTHEHVTMLFSDIVGFT 80 (305)
Q Consensus 1 ~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~lP~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft 80 (305)
++|+|+++....+|+.++++++++++++.++++.||+|...||..++|+.||++|+.|+.....++++|||||+||++||
T Consensus 375 lILl~~Q~~aq~el~~~lE~~~~~Le~~~~~Le~EKkkTd~LLy~mlP~~VA~qLr~g~~v~a~~f~~vTilFsdIv~Ft 454 (671)
T KOG4171|consen 375 LVLLGQQRRAQLELNLELEKLKEKLEKMTRELEEEKKKTDTLLYSMLPRSVAQQLRQGESVDAKEFDDVTILFSDIVGFT 454 (671)
T ss_pred heecchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHcCCCcCccccCceEEEEeccchHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHhHHHHHHHHHHHHHHhhhhcCeEEEeeeCceEEEEeCCCCCCchHHHHHHHHHHHHHHHhhhcccCC-CCc
Q psy7235 81 SICSTATPFMVISMLENLYNKFDAFCGQLDVYKVETIGDAYCVAGGLHKTQSTHAQRIAWMALKMIHTCASHSTHD-GKP 159 (305)
Q Consensus 81 ~l~~~~~~~~~~~~ln~~~~~~~~~v~~~~g~~ik~~Gd~~~~~~g~~~~~~~~a~~a~~~Al~i~~~~~~~~~~~-~~~ 159 (305)
.++..+.|-+++.+||++|+.||+++..++++++.++||+||++.|+|.....||..++++||.|....+++..+. +.+
T Consensus 455 ~ic~~ctp~~vV~~LN~lyt~fD~~i~~~~VYKVETIGDaYm~vsG~P~~~~~HAe~i~~~AL~Mm~~ak~v~~p~~~~p 534 (671)
T KOG4171|consen 455 AICSQCTPMQVVNMLNELYTRFDRIIDTHDVYKVETIGDAYMVVSGLPDASDYHAEHIADLALGMMEEAKEVVSPVTGEP 534 (671)
T ss_pred hHhhccCcHHHHHHHHHHHHHHHHhhcccCeEEEeeccchheeecCCCCCChhHHHHHHHHHHHHHHHhhhhcCcCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988876654 444
Q ss_pred cchhhhhhhHhhhhhhhhhhhhhhcccccCceeeEEEEEeeceEEEEeecCCCcceEEeCchHHHHHHHhcCCCCCcEEe
Q psy7235 160 IKLRVSTLLQVRVLRPAVVLKMRWIDDSHLAVFQMRIGLHTGTVLAGVVGVKMPRYCLFGHNVTVANKFESGSEPLRINI 239 (305)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~G~vG~~~~~y~v~G~~Vn~Aarl~~~a~~~~I~v 239 (305)
+. +|||||+|+|++||||.+.|+|++||++||+|+|||+.+.|+.|+|
T Consensus 535 i~--------------------------------iRiGIHsG~VvAGVVG~kmPRYCLFGdTVn~AsrmES~s~p~KI~v 582 (671)
T KOG4171|consen 535 IQ--------------------------------IRIGIHSGPVVAGVVGVKMPRYCLFGDTVNLASRMESSSVPGKINV 582 (671)
T ss_pred eE--------------------------------EEEEeccCCeeeeeecccccceeecCCchhhhhhhhcCCCCceEEe
Confidence 44 9999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhCCCCeEEEeCceeeccCCCCCCcceeEEEEeecCCCCCCCCC
Q psy7235 240 SPTTYECLRNTEHFTFEPRSRELLPKGFPENIPGICYFVNDYRHPSLPSEE 290 (305)
Q Consensus 240 S~~t~~~l~~~~~~~~~~~g~~~~~kG~~~~~~~~~y~v~~~~~~~~~~~~ 290 (305)
|+.||+.|+....|.|+++|.+.+ || ++++.||||.....+..+...
T Consensus 583 S~~T~~~l~~~~~f~f~pRg~v~v-k~---kg~m~tyFL~~~~~~~~~~~~ 629 (671)
T KOG4171|consen 583 SPTTYRKLKKQGSFEFEPRGRVEV-KG---KGPMETYFLERSLGPSIWEPC 629 (671)
T ss_pred CHHHHHHHHhCCCceeeecCcccc-CC---CCceEEEEEEecCCCCCCccc
Confidence 999999999877799999999999 66 899999999988776644433
|
|
| >PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4 | Back alignment and domain information |
|---|
| >smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain | Back alignment and domain information |
|---|
| >KOG3619|consensus | Back alignment and domain information |
|---|
| >KOG1023|consensus | Back alignment and domain information |
|---|
| >KOG3619|consensus | Back alignment and domain information |
|---|
| >COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG3618|consensus | Back alignment and domain information |
|---|
| >cd07302 CHD cyclase homology domain | Back alignment and domain information |
|---|
| >KOG3618|consensus | Back alignment and domain information |
|---|
| >cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases | Back alignment and domain information |
|---|
| >PF05165 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohydrolase III catalyses the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP | Back alignment and domain information |
|---|
| >PRK09966 putative inner membrane diguanylate cyclase; Provisional | Back alignment and domain information |
|---|
| >PF00990 GGDEF: GGDEF domain; InterPro: IPR000160 This domain appears to be ubiquitous in bacteria and is often linked to a regulatory domain, such as a phosphorylation receiver or oxygen sensing domain | Back alignment and domain information |
|---|
| >PRK10245 adrA diguanylate cyclase AdrA; Provisional | Back alignment and domain information |
|---|
| >PRK11059 regulatory protein CsrD; Provisional | Back alignment and domain information |
|---|
| >PRK09894 diguanylate cyclase; Provisional | Back alignment and domain information |
|---|
| >smart00267 GGDEF diguanylate cyclase | Back alignment and domain information |
|---|
| >COG2199 c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2429 Archaeal GTP cyclohydrolase III [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11829 biofilm formation regulator HmsP; Provisional | Back alignment and domain information |
|---|
| >PRK13561 putative diguanylate cyclase; Provisional | Back alignment and domain information |
|---|
| >cd01949 GGDEF Diguanylate-cyclase (DGC) or GGDEF domain | Back alignment and domain information |
|---|
| >PRK02240 GTP cyclohydrolase III; Provisional | Back alignment and domain information |
|---|
| >TIGR02577 cas_TM1794_Crm2 CRISPR-associated protein, Crm2 family | Back alignment and domain information |
|---|
| >PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional | Back alignment and domain information |
|---|
| >PRK15426 putative diguanylate cyclase YedQ; Provisional | Back alignment and domain information |
|---|
| >COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR00254 GGDEF diguanylate cyclase (GGDEF) domain | Back alignment and domain information |
|---|
| >PF10851 DUF2652: Protein of unknown function (DUF2652) ; InterPro: IPR020503 This entry contains proteins with no known function | Back alignment and domain information |
|---|
| >PRK02240 GTP cyclohydrolase III; Provisional | Back alignment and domain information |
|---|
| >TIGR02578 cas_TM1811_Csm1 CRISPR-associated protein, Csm1 family | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 305 | ||||
| 3uvj_A | 225 | Crystal Structure Of The Catalytic Domain Of The He | 3e-66 | ||
| 3et6_B | 190 | The Crystal Structure Of The Catalytic Domain Of A | 2e-29 | ||
| 3et6_A | 190 | The Crystal Structure Of The Catalytic Domain Of A | 5e-29 | ||
| 2wz1_A | 219 | Structure Of The Catalytic Domain Of Human Soluble | 7e-25 | ||
| 3uvj_B | 220 | Crystal Structure Of The Catalytic Domain Of The He | 9e-23 | ||
| 1yk9_A | 204 | Crystal Structure Of A Mutant Form Of The Mycobacte | 3e-22 | ||
| 1cjk_A | 217 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 1e-15 | ||
| 1azs_A | 220 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 1e-15 | ||
| 1cs4_A | 225 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 1e-15 | ||
| 1ab8_A | 220 | Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COM | 1e-06 | ||
| 1cul_B | 208 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 1e-06 | ||
| 1azs_B | 212 | Complex Of Gs-Alpha With The Catalytic Domains Of M | 1e-06 | ||
| 3r5g_A | 198 | Crystal Structure Of The Adenylyl Cyclase Cyab From | 3e-05 | ||
| 2w01_A | 208 | Crystal Structure Of The Guanylyl Cyclase Cya2 Leng | 5e-05 |
| >pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 225 | Back alignment and structure |
|
| >pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190 | Back alignment and structure |
| >pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190 | Back alignment and structure |
| >pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble Guanylate Cyclase 1 Beta 3. Length = 219 | Back alignment and structure |
| >pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 220 | Back alignment and structure |
| >pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial Adenylyl Cyclase Rv1625c Length = 204 | Back alignment and structure |
| >pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With Adenosine 5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn Length = 217 | Back alignment and structure |
| >pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 220 | Back alignment and structure |
| >pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And Mg Length = 225 | Back alignment and structure |
| >pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX Length = 220 | Back alignment and structure |
| >pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg Length = 208 | Back alignment and structure |
| >pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 212 | Back alignment and structure |
| >pdb|3R5G|A Chain A, Crystal Structure Of The Adenylyl Cyclase Cyab From P. Aeruginosa Length = 198 | Back alignment and structure |
| >pdb|2W01|A Chain A, Crystal Structure Of The Guanylyl Cyclase Cya2 Length = 208 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 305 | |||
| 3uvj_A | 225 | Guanylate cyclase soluble subunit alpha-3; nitric | 1e-100 | |
| 3et6_A | 190 | Soluble guanylyl cyclase beta; guanylate cyclase, | 9e-80 | |
| 2wz1_A | 219 | Guanylate cyclase soluble subunit beta-1; lyase, G | 4e-78 | |
| 1yk9_A | 204 | Adenylate cyclase; beta-alpha-beta sandwich, struc | 9e-78 | |
| 1azs_A | 220 | VC1; complex (lyase/hydrolase), hydrolase, signal | 2e-76 | |
| 1ab8_A | 220 | Adenylyl cyclase; lyase, complex (transferase-inhi | 2e-58 | |
| 1fx2_A | 235 | Receptor-type adenylate cyclase gresag 4.1; CAMP, | 2e-39 | |
| 1y10_A | 407 | Hypothetical protein RV1264/MT1302; adenylyl cycla | 3e-34 | |
| 2w01_A | 208 | Adenylate cyclase; guanylyl cyclase, class III nuc | 2e-17 | |
| 3r5g_A | 198 | CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas | 8e-17 | |
| 1wc3_A | 219 | Adenylate cyclase; soluble adenylyl cyclase, CAMP | 1e-15 | |
| 1ybt_A | 184 | Hydrolase, alpha/beta hydrolase fold family; cycla | 5e-13 | |
| 3mr7_A | 189 | Adenylate/guanylate cyclase/hydrolase, alpha/beta | 6e-11 | |
| 3hls_A | 66 | Guanylate cyclase soluble subunit beta-1; coiled-c | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 |
| >3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225 | Back alignment and structure |
|---|
Score = 293 bits (752), Expect = e-100
Identities = 124/246 (50%), Positives = 155/246 (63%), Gaps = 32/246 (13%)
Query: 58 GESIEAKTHEHVTMLFSDIVGFTSICSTATPFMVISMLENLYNKFDAFCGQLDVYKVETI 117
G+ ++AK +VTMLFSDIVGFT+ICS +P VI+ML LY +FD CG+LDVYKVETI
Sbjct: 4 GQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETI 63
Query: 118 GDAYCVAGGLHKTQSTHAQRIAWMALKMIHTCASHSTHDGKPIKLRVSTLLQVRVLRPAV 177
GDAYCVAGGLHK THA +IA MALKM+ + G+PI
Sbjct: 64 GDAYCVAGGLHKESDTHAVQIALMALKMMELSDEVMSPHGEPI----------------- 106
Query: 178 VLKMRWIDDSHLAVFQMRIGLHTGTVLAGVVGVKMPRYCLFGHNVTVANKFESGSEPLRI 237
+MRIGLH+G+V AGVVGVKMPRYCLFG+NVT+ANKFES S P +I
Sbjct: 107 ---------------KMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKI 151
Query: 238 NISPTTYECLRNTEHFTFEPRSRELLPKGFPENIPGICYFVNDYRHPSLPSEEPLEKHID 297
N+SPTTY L++ F F PRSRE LP FP IPGIC+F++ Y+ + +K ++
Sbjct: 152 NVSPTTYRLLKDCPGFVFTPRSREELPPNFPSEIPGICHFLDAYQQGTNSKPCFQKKDVE 211
Query: 298 RAVEDL 303
+
Sbjct: 212 DGNANF 217
|
| >3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190 | Back alignment and structure |
|---|
| >2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219 | Back alignment and structure |
|---|
| >1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204 | Back alignment and structure |
|---|
| >1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220 | Back alignment and structure |
|---|
| >1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220 | Back alignment and structure |
|---|
| >1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Length = 235 | Back alignment and structure |
|---|
| >1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Length = 407 | Back alignment and structure |
|---|
| >2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} Length = 208 | Back alignment and structure |
|---|
| >3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} Length = 198 | Back alignment and structure |
|---|
| >1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* Length = 219 | Back alignment and structure |
|---|
| >1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* Length = 184 | Back alignment and structure |
|---|
| >3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} Length = 189 | Back alignment and structure |
|---|
| >3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} Length = 66 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| 3uvj_A | 225 | Guanylate cyclase soluble subunit alpha-3; nitric | 100.0 | |
| 2wz1_A | 219 | Guanylate cyclase soluble subunit beta-1; lyase, G | 100.0 | |
| 1yk9_A | 204 | Adenylate cyclase; beta-alpha-beta sandwich, struc | 100.0 | |
| 3et6_A | 190 | Soluble guanylyl cyclase beta; guanylate cyclase, | 100.0 | |
| 1ab8_A | 220 | Adenylyl cyclase; lyase, complex (transferase-inhi | 100.0 | |
| 2w01_A | 208 | Adenylate cyclase; guanylyl cyclase, class III nuc | 100.0 | |
| 1azs_A | 220 | VC1; complex (lyase/hydrolase), hydrolase, signal | 100.0 | |
| 3r5g_A | 198 | CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas | 100.0 | |
| 1y10_A | 407 | Hypothetical protein RV1264/MT1302; adenylyl cycla | 100.0 | |
| 1wc3_A | 219 | Adenylate cyclase; soluble adenylyl cyclase, CAMP | 100.0 | |
| 1fx2_A | 235 | Receptor-type adenylate cyclase gresag 4.1; CAMP, | 100.0 | |
| 1ybt_A | 184 | Hydrolase, alpha/beta hydrolase fold family; cycla | 100.0 | |
| 3mr7_A | 189 | Adenylate/guanylate cyclase/hydrolase, alpha/beta | 100.0 | |
| 3hls_A | 66 | Guanylate cyclase soluble subunit beta-1; coiled-c | 98.4 | |
| 3i5c_A | 206 | Fusion of general control protein GCN4 and WSPR R | 96.59 | |
| 2qv6_A | 268 | MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY | 95.06 | |
| 3hva_A | 177 | Protein FIMX; ggdef diguanylate cyclase, biofilm, | 94.42 | |
| 3mtk_A | 178 | Diguanylate cyclase/phosphodiesterase; structural | 93.95 | |
| 3tvk_A | 179 | DGC, diguanylate cyclase YDEH; putative zinc senso | 93.78 | |
| 3ign_A | 177 | Diguanylate cyclase; ggdef domain, A1U3W3_marav, N | 93.68 | |
| 3icl_A | 171 | EAL/ggdef domain protein; structural genomics, PSI | 93.54 | |
| 3ezu_A | 342 | Ggdef domain protein; multidomain protein of unkno | 93.34 | |
| 3bre_A | 358 | Probable two-component response regulator; protein | 93.05 | |
| 3pjx_A | 430 | Cyclic dimeric GMP binding protein; ggdef-EAL tand | 92.99 | |
| 3hvw_A | 176 | Diguanylate-cyclase (DGC); alpha-beta protein., st | 92.48 | |
| 3qyy_A | 167 | Response regulator; C-DI-GMP, DGC, ggdef, competit | 90.63 | |
| 1w25_A | 459 | Stalked-cell differentiation controlling protein; | 88.11 |
| >3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-45 Score=319.09 Aligned_cols=200 Identities=61% Similarity=1.053 Sum_probs=180.2
Q ss_pred cCCcccccccCcEEEEEEeccCcccccccCCHHhHHHHHHHHHHHHHHhhhhcCeEEEeeeCceEEEEeCCCCCCchHHH
Q psy7235 57 LGESIEAKTHEHVTMLFSDIVGFTSICSTATPFMVISMLENLYNKFDAFCGQLDVYKVETIGDAYCVAGGLHKTQSTHAQ 136 (305)
Q Consensus 57 ~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~~~~~~~~ln~~~~~~~~~v~~~~g~~ik~~Gd~~~~~~g~~~~~~~~a~ 136 (305)
+++....++++++||||+||+|||.+++.++|++++.+||++|..+++++..|+|+++|++||+||++||+|.+..+|+.
T Consensus 3 ~g~~~~~~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~~g~v~k~~GD~~ma~fg~p~~~~~~a~ 82 (225)
T 3uvj_A 3 QGQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKESDTHAV 82 (225)
T ss_dssp --CEEEEEEEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCEEECCSTTCEEEEESSSSCCTTHHH
T ss_pred CCCccCCcccceEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeCcEEEEEECCCCCchHHHH
Confidence 45667778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCccchhhhhhhHhhhhhhhhhhhhhhcccccCceeeEEEEEeeceEEEEeecCCCcceE
Q psy7235 137 RIAWMALKMIHTCASHSTHDGKPIKLRVSTLLQVRVLRPAVVLKMRWIDDSHLAVFQMRIGLHTGTVLAGVVGVKMPRYC 216 (305)
Q Consensus 137 ~a~~~Al~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~G~vG~~~~~y~ 216 (305)
+|+.||++|++.+..++...+.+ +++|||||+|+|++|++|..+++||
T Consensus 83 ~a~~~al~~~~~~~~~~~~~~~~--------------------------------l~~riGih~G~v~~G~iG~~~~~~~ 130 (225)
T 3uvj_A 83 QIALMALKMMELSDEVMSPHGEP--------------------------------IKMRIGLHSGSVFAGVVGVKMPRYC 130 (225)
T ss_dssp HHHHHHHHHHHHHTTSBCTTSCB--------------------------------CCEEEEEEEEEEEEEEECC-CCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcCCc--------------------------------eEEEEEEEeccEEEEEecCCCceEE
Confidence 99999999999999877655444 4499999999999999999888999
Q ss_pred EeCchHHHHHHHhcCCCCCcEEeCHHHHHHhhCCCCeEEEeCceeeccCCCCCCcceeEEEEeecCCCCCCC
Q psy7235 217 LFGHNVTVANKFESGSEPLRINISPTTYECLRNTEHFTFEPRSRELLPKGFPENIPGICYFVNDYRHPSLPS 288 (305)
Q Consensus 217 v~G~~Vn~Aarl~~~a~~~~I~vS~~t~~~l~~~~~~~~~~~g~~~~~kG~~~~~~~~~y~v~~~~~~~~~~ 288 (305)
+||++||+|+||++.|.+++|+||++|++.+.+...|.|+++|.+.+|||++++.++.+|+|..+..+..+.
T Consensus 131 ~~Gd~VN~AaRle~~a~~~~I~vS~~~~~~l~~~~~~~~~~~g~~~lk~~~~~~~~~~~y~l~~~~~~~~~~ 202 (225)
T 3uvj_A 131 LFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGFVFTPRSREELPPNFPSEIPGICHFLDAYQQGTNSK 202 (225)
T ss_dssp EESHHHHHHHHHHHTSCTTCEEECHHHHHHHTTSTTEEEEECCSTTSCTTSCTTSCCCCEEEEEEC------
T ss_pred EECcHHHHHHHHHhcCCCCeEEECHHHHHhhcCCCceEEEEcCcEEecCCCCCCCceEEEEEeccccCCCCc
Confidence 999999999999999999999999999999998668999999999998889999999999999887765544
|
| >2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B | Back alignment and structure |
|---|
| >1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B | Back alignment and structure |
|---|
| >1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* | Back alignment and structure |
|---|
| >2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} | Back alignment and structure |
|---|
| >1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* | Back alignment and structure |
|---|
| >3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0 | Back alignment and structure |
|---|
| >1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* | Back alignment and structure |
|---|
| >1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* | Back alignment and structure |
|---|
| >1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A | Back alignment and structure |
|---|
| >1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* | Back alignment and structure |
|---|
| >3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
| >3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A* | Back alignment and structure |
|---|
| >2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
| >3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus} | Back alignment and structure |
|---|
| >3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
| >3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8} | Back alignment and structure |
|---|
| >3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus} | Back alignment and structure |
|---|
| >3ezu_A Ggdef domain protein; multidomain protein of unknown function with GG domain, structural genomics, joint center for structural GE JCSG; 1.95A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
| >3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A* | Back alignment and structure |
|---|
| >3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A | Back alignment and structure |
|---|
| >3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
| >1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 305 | ||||
| d1fx2a_ | 235 | d.58.29.1 (A:) Receptor-type monomeric adenylyl cy | 1e-33 | |
| d1azsb_ | 199 | d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a { | 2e-27 | |
| d1azsa_ | 190 | d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {D | 3e-22 | |
| d1wc1a_ | 197 | d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina p | 2e-20 |
| >d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Nucleotide cyclase family: Adenylyl and guanylyl cyclase catalytic domain domain: Receptor-type monomeric adenylyl cyclase species: Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]
Score = 121 bits (303), Expect = 1e-33
Identities = 35/227 (15%), Positives = 86/227 (37%), Gaps = 8/227 (3%)
Query: 63 AKTHEHVTMLFSDIVGFTSICSTATPFMVISMLENLYNKFDAFCGQLDVYKVETIGDAYC 122
+ + VT++F+DI T++ + P ++ + + + G+ Y+V+T+GD++
Sbjct: 7 KEPTDPVTLIFTDIESSTALWAA-HPDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFM 65
Query: 123 VAGGLHKTQSTHAQRIAWMALKMIHTCASHSTHDGKPIKLRVSTLLQVRVLRPAVVLKMR 182
+A AQ + L + + + R + + ++
Sbjct: 66 IASKSPFAAVQLAQELQLCFLHHDWGTNALDDSYREFEEQRAEGECEYTPPTAHMDPEVY 125
Query: 183 WIDDSHLAVFQMRIGLHTGTVLAGVVGVKMPRYCLFGHNVTVANKFESGSEPLRINISPT 242
+ L ++R+G+HTG V Y +G +A + ES + ++ ++
Sbjct: 126 SRLWNGL---RVRVGIHTGLCDIRHDEVTKG-YDYYGRTPNMAARTESVANGGQVLMTHA 181
Query: 243 TYECLRNTEHFTFEPRSRELLP-KGFPENIPGICYFVNDYRHPSLPS 288
Y L + + + + +G + + Y +N + +
Sbjct: 182 AYMSLSAEDRKQIDVTALGDVALRGVSDPVK--MYQLNTVPSRNFAA 226
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| >d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 199 | Back information, alignment and structure |
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| >d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Length = 190 | Back information, alignment and structure |
|---|
| >d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Length = 197 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| d1azsb_ | 199 | Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor | 100.0 | |
| d1azsa_ | 190 | Adenylyl cyclase VC1, domain C1a {Dog (Canis famil | 100.0 | |
| d1wc1a_ | 197 | Adenylate cyclase CyaC {Spirulina platensis [TaxId | 100.0 | |
| d1fx2a_ | 235 | Receptor-type monomeric adenylyl cyclase {Trypanos | 100.0 | |
| d1w25a3 | 162 | Response regulator PleD, C-terminal domain {Caulob | 93.33 |
| >d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: Nucleotide cyclase family: Adenylyl and guanylyl cyclase catalytic domain domain: Adenylyl cyclase IIC1, domain C2a species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=7.2e-41 Score=286.43 Aligned_cols=179 Identities=25% Similarity=0.434 Sum_probs=158.9
Q ss_pred cccCcEEEEEEeccCcccccccCC----HHhHHHHHHHHHHHHHHhhhh---cCeEEEeeeCceEEEEeCCCCCC-----
Q psy7235 64 KTHEHVTMLFSDIVGFTSICSTAT----PFMVISMLENLYNKFDAFCGQ---LDVYKVETIGDAYCVAGGLHKTQ----- 131 (305)
Q Consensus 64 ~~~~~vtvlf~DI~~ft~l~~~~~----~~~~~~~ln~~~~~~~~~v~~---~~g~~ik~~Gd~~~~~~g~~~~~----- 131 (305)
+.+++|||||+||+|||.+++.++ |.+++++||++|..|+.++.. |+|+++|++||+||++||+|...
T Consensus 2 ~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~~~~~Ln~~~~~fd~~~~~~~~~g~~~~k~iGD~~~a~~g~~~~~~~~~a 81 (199)
T d1azsb_ 2 QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAIPSQEHA 81 (199)
T ss_dssp CEEEEEEEEEEECTTHHHHCCCCTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEESSSCC------
T ss_pred CCCCcEEEEEEEcCCChHHHHhCCcccCHHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCeEEEEecCCCCcccccc
Confidence 467889999999999999998764 678999999999999999866 89999999999999999987532
Q ss_pred ------chHHHHHHHHHHHHHHHhhhcccCCCCccchhhhhhhHhhhhhhhhhhhhhhcccccCceeeEEEEEeeceEEE
Q psy7235 132 ------STHAQRIAWMALKMIHTCASHSTHDGKPIKLRVSTLLQVRVLRPAVVLKMRWIDDSHLAVFQMRIGLHTGTVLA 205 (305)
Q Consensus 132 ------~~~a~~a~~~Al~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rIGIh~G~v~~ 205 (305)
..++.+++++|++|++.+.+++.....++ ++|||||+|+|++
T Consensus 82 ~~~~~~~~~~~~av~~a~~~~~~~~~~~~~~~~~l--------------------------------~~rIGIh~G~v~~ 129 (199)
T d1azsb_ 82 QEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDF--------------------------------KLRVGINHGPVIA 129 (199)
T ss_dssp ----CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCC--------------------------------CCEEEEEEEEEEE
T ss_pred cchHHHHHhHHHHHHHHHHHHHHhhhccccCCCCe--------------------------------eEEeeeeecCcee
Confidence 24678899999999998887765544444 4999999999999
Q ss_pred EeecCCCcceEEeCchHHHHHHHhcCCCCCcEEeCHHHHHHhhCCCCeEEEeCceeeccCCCCCCcceeEEEEe
Q psy7235 206 GVVGVKMPRYCLFGHNVTVANKFESGSEPLRINISPTTYECLRNTEHFTFEPRSRELLPKGFPENIPGICYFVN 279 (305)
Q Consensus 206 G~vG~~~~~y~v~G~~Vn~Aarl~~~a~~~~I~vS~~t~~~l~~~~~~~~~~~g~~~~~kG~~~~~~~~~y~v~ 279 (305)
|++|.++++||+||++||+|+|||+.|+|++|+||++||+.+++ .+|.++++|.+.+ || ++.+.||||+
T Consensus 130 Gv~g~~~~~y~v~Gd~VN~AaRle~~a~~g~I~vS~~t~~~l~~-~~~~~~~~g~i~v-KG---kg~~~ty~l~ 198 (199)
T d1azsb_ 130 GVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQT-LGYTCTCRGIINV-KG---KGDLKTYFVN 198 (199)
T ss_dssp EEECSSSCEEEEESHHHHHHHHHHHTCCTTEEEEEHHHHHHHHH-TTCCEEEEEEEEE-TT---TEEEEEEEEC
T ss_pred eeeccccccccccchHHHHHHHHHhcCCCCeEEECHHHHHHHhc-CCeEEEEeCCEEe-cC---CCeEEEEEEe
Confidence 99999999999999999999999999999999999999999986 4799999999999 88 4679999985
|
| >d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} | Back information, alignment and structure |
|---|
| >d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} | Back information, alignment and structure |
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| >d1w25a3 d.58.29.2 (A:294-455) Response regulator PleD, C-terminal domain {Caulobacter crescentus [TaxId: 155892]} | Back information, alignment and structure |
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