Psyllid ID: psy7267

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------57
Protein Sequence
MISQQNNRTQSGVFPLEMGGESEPILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVYFLKVTGSCNMDVHKTCAKNDCSARSKLGVVAVKCVLLPVVRIEYFPQMPLRPGEVHCSSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVSGGIDAEGSRGTRPEKG
Secondary Structure (PSIPRED)
ccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHccccccccccccccccEEEEEEccccccccEEccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccccEEccHHHHHHHHHccccEEEEEEEEEEccccEEEcHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccccccHHHHHHHHHcccccHHHHcccccccccccHHHHHHHHHHHcccccccccccccccccccccccEEEcccEEEEEccccccccccEEEEEEEccccEEEEEEEEcccccccEEEEEEEcEEEEcccccccccccccEEEEEEcEEEEEEcHHHcccccccccccccEEEEEEEcccccccccEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccccccEEEEccHccccccEEccHHHHHHHHHHHHHHHHEHccccccccccccEEccHHHHHHHHHHHcccccEEHHHHHHHHHHccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccEEEccccccHHHHHHHHHHHHHHHHHHHccccEcEcHHHccccccHHHcccEEEEEEEEccEEEEEEccccccccccEEcccEEEccccEEEccccEccccccccEEEEccccccEEHHEEHccccHcccEEEEEEccEEEEccccccccHHcccEEEEEEcEEEEEHcHHHHcccEEccccEccEEEEEccccccccccEEEEEccEccccccccccccc
Coil and Loop (DISEMBL)
misqqnnrtqsgvfplemggesepiltEFEIHCYIALFLVCGILSYAYrsfktknpfpdidflskgervfldvktgqelefpslddepsvnlsvivpayneqdrlkPMLDETIEFLNERRkkiptfkyEIIVVsdgstdktMQVVHQYTEKCGEDIVRGLKLLKnrgkggavtlgtkcargsiilfadadgatkfADLEKLEDKLKeltdgdyiedknnaagcngvIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGvrtirdtqcgfkLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHipmaevsvnwteiegskivpvFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYravyvpsqtspvyflkvtgscnmdvhktcakndcsarskLGVVAVKCVLlpvvrieyfpqmplrpgevhcssvvcrpmnavtfgrtvsesspgigtihkfgvsGKSLLFIQLCDIgrefnyyyyfwypqiiicpemsktgllnknlIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFIcgwdlnnhhsvpvcvsggidaegsrgtrpekg
Flexible Loop (DISEMBL)
misqqnnrtqsgvfpleMGGESEPILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELefpslddepsvnLSVIVPayneqdrlkpMLDETIEFLNerrkkiptfkyeiivvsdgstdktMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELtdgdyiedknnAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVYFLKVTGSCNMDVHKTCAKNdcsarsklgVVAVKCVLLPVVRIEYFPQMPLRPGEVHCSSVVCRPMNAVTFGRtvsesspgigTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVsggidaegsrgtrpekg
Low Complexity Region (SEG)
MISQQNNRTQSGVFPLEMGGESEPILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVrglkllknrgkggAVTLGTKCARGSIILFADADGATKFAdlekledklkeltdGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVYFLKVTGSCNMDVHKTCAKNDCSARSKLGvvavkcvllpvvRIEYFPQMPLRPGEVHCSSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVSGGIDAEGSRGTRPEKG
Disordered region (IsUnstruct)
***********************PILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFP******SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVYFLKVTGSCNMDVHKTCAKNDCSARSKLGVVAVKCVLLPVVRIEYFPQMPLRPGEVHCSSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVSGGI*************
Disordered Region (DISOPRED)
***********GVFPLEMGGESEPILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLS*************************VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAME*******VPSQTSPVYFLKVTGSCNMDVHKTCAKNDCSARSKLGVVAVKCVLLPVVRIEYFP***********SSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVSGGI*************
Disordered Region (DISEMBL)
**********SGVFPLEMGGESEPILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVYFLKVTGSCNMDVHKTCAKNDCSARSKLGVVAVKCVLLPVVRIEYFPQMPLRPGEVHCSSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVSGGIDA***********
Disordered Region (DISPRO)
**********SGVFPLEMGGESEPILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDG*********AGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVYFLKVTGSCNMDVHKTCAKNDCSARSKLGVVAVKCVLLPVVRIEYFPQMPLRPGEVHCSSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVSGGID************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MISQQNNRTQSGVFPLEMGGESEPILTEFEIHCYIALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVYFLKVTGSCNMDVHKTCAKNDCSARSKLGVVAVKCVLLPVVRIEYFPQMPLRPGEVHCSSVVCRPMNAVTFGRTVSESSPGIGTIHKFGVSGKSLLFIQLCDIGREFNYYYYFWYPQIIICPEMSKTGLLNKNLIIFWNLKCVFFCGYKLLSQSIIGTSKISSQFFICGWDLNNHHSVPVCVSGGIDAEGSRGTRPEKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	569
FB|FBgn0261020	326	wol "wollknaeuel" [Drosophila	0.550	0.960	0.492	9.3e-75
ZFIN|ZDB-GENE-030131-6586	323	alg5 "asparagine-linked glycos	0.492	0.866	0.512	2.1e-70
UNIPROTKB|F1N540	324	ALG5 "Uncharacterized protein"	0.537	0.944	0.447	8e-69
UNIPROTKB|Q9Y673	324	ALG5 "Dolichyl-phosphate beta-	0.513	0.901	0.478	1.7e-68
UNIPROTKB|E2R422	324	ALG5 "Uncharacterized protein"	0.518	0.910	0.470	9.2e-68
MGI|MGI:1913498	324	Alg5 "asparagine-linked glycos	0.513	0.901	0.485	1.2e-67
UNIPROTKB|J9P6U5	291	ALG5 "Uncharacterized protein"	0.485	0.948	0.493	1.5e-67
RGD|1308900	324	Alg5 "ALG5, dolichyl-phosphate	0.485	0.851	0.496	5.1e-67
UNIPROTKB|E1BUU9	287	ALG5 "Uncharacterized protein"	0.476	0.944	0.486	1.3e-66
UNIPROTKB|E1C2H8	291	ALG5 "Uncharacterized protein"	0.486	0.951	0.489	1.3e-66

FB|FBgn0261020 wol "wollknaeuel" [Drosophila melanogaster (taxid:7227)]

 Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
 Identities = 160/325 (49%), Positives = 207/325 (63%)

Query:    34 YIALFLVCGILSYAYRS-FKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNL 92
             Y+   L    LS A    +KTK P+P+I    K E  FLD  T + + FPSL+D PS+ L
Sbjct:    11 YLLSTLAVAALSIAALVLYKTK-PYPNIK-RHKDEETFLDPHTIKTVTFPSLEDSPSLEL 68

Query:    93 SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKC 152
             SVIVPAYNE+ RL  MLDE + FL ++    P F YE+IVVSDGS D T+ V   Y++K 
Sbjct:    69 SVIVPAYNEEQRLPSMLDECLAFLEQKSAGTPNFTYEVIVVSDGSQDATVSVALGYSKKH 128

Query:   153 GEDIVXXXXXXXXXXXXXAVTLGTKCARGSIILFADADGATKFAXXXXXXXXXXXXXXGD 212
             G + V             AV +G   ARG  +LFADADGATKF                +
Sbjct:   129 GAEKVRVLELIENRGKGGAVRMGMLSARGRNLLFADADGATKFPDYDKLEVALKQLAP-E 187

Query:   213 YIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGF 272
             + +D        G+ +GSRAHLE  A   RSFFR ILM GFHF+VW   VR+IRDTQCGF
Sbjct:   188 WRDD--------GIAIGSRAHLENDAIATRSFFRTILMHGFHFLVWLFAVRSIRDTQCGF 239

Query:   273 KLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQ 332
             KLFTR +A +LF+S+HV+RWAFDVELL++AE L +PM+EV+V WTEI+GSK+ P +SW+Q
Sbjct:   240 KLFTRTTARKLFTSLHVERWAFDVELLYLAENLKLPMSEVAVRWTEIDGSKLTPFWSWLQ 299

Query:   333 MGWDVLNIWLHYTLGLWKIKAMENK 357
             MG D+  IW+ Y +G W+I +++ K
Sbjct:   300 MGRDLFMIWVRYLVGAWRIASIQKK 324

GO:0004581 "dolichyl-phosphate beta-glucosyltransferase activity" evidence=ISS

GO:0007379 "segment specification" evidence=IMP

GO:0009880 "embryonic pattern specification" evidence=IMP

GO:0007030 "Golgi organization" evidence=IMP

GO:0040003 "chitin-based cuticle development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0007029 "endoplasmic reticulum organization" evidence=IMP

GO:0006493 "protein O-linked glycosylation" evidence=IMP

GO:0006487 "protein N-linked glycosylation" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0007009 "plasma membrane organization" evidence=IMP

ZFIN|ZDB-GENE-030131-6586 alg5 "asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase)" [Danio rerio (taxid:7955)]

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 149/291 (51%), Positives = 192/291 (65%)

Query:    67 ERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTF 126
             E+ FL    G+  +FPSL + PS++LSV+VP+YNE+ RL  M+DE +++L +R+K+ P F
Sbjct:    42 EKQFLTAD-GKREDFPSLMEPPSIDLSVVVPSYNEELRLPVMMDEAMDYLEKRQKENPPF 100

Query:   127 KYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXXXXXXAVTLGTKCARGSIILF 186
              YE+IVV DGS DKT +V  +YT+K G   V             AV +GT   RG +IL 
Sbjct:   101 TYEVIVVDDGSKDKTTEVAMKYTKKYGAKKVRVLTLVKNRGKGGAVKMGTLSCRGRLILM 160

Query:   187 ADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR 246
             ADADGATKFA                  +  N A  C     GSRAHLE  +  QRS FR
Sbjct:   161 ADADGATKFADVEKVEEGLESITE----KPDNMAISC-----GSRAHLEKESVAQRSMFR 211

Query:   247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLH 306
               LM GFHF+VWF  VR I+DTQCGFKLFTR++AL+ FSS+HV+RWAFDVELLFIA+   
Sbjct:   212 TFLMYGFHFLVWFFCVRGIKDTQCGFKLFTREAALKTFSSLHVERWAFDVELLFIAQCFD 271

Query:   307 IPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENK 357
             IP+ EV+VNWTEIEGSK+VP +SW+QMG D++ I L Y  G W++++ E K
Sbjct:   272 IPIEEVAVNWTEIEGSKLVPFWSWLQMGRDLIFIRLRYLTGAWRLES-ERK 321

GO:0005575 "cellular_component" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|F1N540 ALG5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 142/317 (44%), Positives = 198/317 (62%)

Query:    36 ALFLVCGILSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVI 95
             A  +   ++  ++ +F T    P +    + E+ FL+V+ GQ    PS+ D P+  LSV+
Sbjct:    13 AALVAAALILISFVAFITATEMPQLH-RHEEEKFFLNVR-GQREALPSIQDSPTKQLSVV 70

Query:    96 VPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGED 155
             VP+YNE+ RL  M+DE + +L +R+K+ PTF YE+I+V DGS D+T +V  +Y +K G D
Sbjct:    71 VPSYNEEKRLPVMMDEALGYLEDRQKQDPTFTYEVIIVDDGSKDQTSKVAFKYCQKYGSD 130

Query:   156 IVXXXXXXXXXXXXXAVTLGTKCARGSIILFADADGATKFAXXXXXXXXXXXXXXGDYIE 215
              V             A+ +G   +RG  IL ADADGATKF                  + 
Sbjct:   131 KVRVITLVKNRGKGGAIRMGVFSSRGKKILMADADGATKFPDIEKLEKG---------LN 181

Query:   216 DKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLF 275
             D         +  GSRAHLE  +  QRS+FR +LM GFHF+VWF  V+ IRDTQCGFKL 
Sbjct:   182 DLQPWPDQMAIACGSRAHLEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLL 241

Query:   276 TRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGW 335
             TR++A + FSS+H++RWAFDVELL+IA+   IP+AE++VNWTEIEGSK+VP +SW+QMG 
Sbjct:   242 TREAASRTFSSLHIERWAFDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVPFWSWLQMGK 301

Query:   336 DVLNIWLHYTLGLWKIK 352
             D+L I L Y  G W+++
Sbjct:   302 DLLFIRLRYLTGAWRLE 318

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|Q9Y673 ALG5 "Dolichyl-phosphate beta-glucosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
 Identities = 145/303 (47%), Positives = 193/303 (63%)

Query:    50 SFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPML 109
             +F T    P +    + E+ FL+ K GQ+   PS+ D P+  LSV+VP+YNE+ RL  M+
Sbjct:    27 AFTTATKMPALH-RHEEEKFFLNAK-GQKETLPSIWDSPTKQLSVVVPSYNEEKRLPVMM 84

Query:   110 DETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXXXXX 169
             DE + +L +R+K+ P F YE+IVV DGS D+T +V  +Y +K G D V            
Sbjct:    85 DEALSYLEKRQKRDPAFTYEVIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVKNRGKG 144

Query:   170 XAVTLGTKCARGSIILFADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGVIVG 229
              A+ +G   +RG  IL ADADGATKF                D     N  A    +  G
Sbjct:   145 GAIRMGIFSSRGEKILMADADGATKFPDVEKLEKGL-----NDLQPWPNQMA----IACG 195

Query:   230 SRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHV 289
             SRAHLE  +  QRS+FR +LM GFHF+VWF  V+ IRDTQCGFKLFTR++A + FSS+HV
Sbjct:   196 SRAHLEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAASRTFSSLHV 255

Query:   290 QRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLW 349
             +RWAFDVELL+IA+   IP+AE++VNWTEIEGSK+VP +SW+QMG D+L I L Y  G W
Sbjct:   256 ERWAFDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAW 315

Query:   350 KIK 352
             +++
Sbjct:   316 RLE 318

GO:0016021 "integral to membrane" evidence=IEA

GO:0004581 "dolichyl-phosphate beta-glucosyltransferase activity" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0004576 "oligosaccharyl transferase activity" evidence=TAS

GO:0006486 "protein glycosylation" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|E2R422 ALG5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 144/306 (47%), Positives = 196/306 (64%)

Query:    47 AYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLK 106
             ++ +F T    P +    + E+ FL+ K GQ+   PS+ D P+  LSV+VP+YNE+ RL 
Sbjct:    24 SFVAFITATKMPHLH-QHEEEKFFLNAK-GQKETLPSVWDSPTKQLSVVVPSYNEEKRLP 81

Query:   107 PMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXX 166
              M+DE + +L +R+K+ PTF YE+IVV DGS D+T +V  +Y +K G D V         
Sbjct:    82 VMMDEALGYLEKRQKQDPTFTYEVIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVKNR 141

Query:   167 XXXXAVTLGTKCARGSIILFADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGV 226
                 A+ +G   +RG  IL ADADGAT+F                 + E    A  C   
Sbjct:   142 GKGGAIKMGIFSSRGEKILMADADGATQFPDIEKLEKGLNDLQ--PWPEQM--AIAC--- 194

Query:   227 IVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSS 286
               GSRAHLE  +  QRS+FR +LM GFHF+VWF  V+ IRDTQCGFKLFTR++A + FSS
Sbjct:   195 --GSRAHLEKESIAQRSYFRTLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAASRTFSS 252

Query:   287 IHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTL 346
             +H++RWAFDVELL+IA+   IP+AE++VNWTEIEGSK+VP +SW+QMG D+L I L Y  
Sbjct:   253 LHIERWAFDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLT 312

Query:   347 GLWKIK 352
             G W+++
Sbjct:   313 GAWRLE 318

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

MGI|MGI:1913498 Alg5 "asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase)" [Mus musculus (taxid:10090)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 147/303 (48%), Positives = 191/303 (63%)

Query:    50 SFKTKNPFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPML 109
             +F T    P   +  + E+ FL+ K GQ+   PS+ D P+  LSV+VP+YNE+ RL  M+
Sbjct:    27 AFITATKMPPC-YQHEEEKFFLNAK-GQKEALPSIWDSPTKQLSVVVPSYNEEKRLPVMM 84

Query:   110 DETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXXXXX 169
             DE + +L +R+K   TF YE+IVV DGS D+T +V  +Y +K G D V            
Sbjct:    85 DEALNYLEKRQKHDCTFTYEVIVVDDGSEDQTSKVALKYCQKYGSDKVRVITLVRNRGKG 144

Query:   170 XAVTLGTKCARGSIILFADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGVIVG 229
              AV +G   +RG  IL ADADGATKF                 + E    A  C     G
Sbjct:   145 GAVRMGVFSSRGEKILMADADGATKFPDVEKLEKGLSDLQ--PWPEQM--AIAC-----G 195

Query:   230 SRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHV 289
             SRAHLE  +  QRS+FR  LM GFHF+VWF  V+ IRDTQCGFKL TR++A + FSS+H+
Sbjct:   196 SRAHLEKESIAQRSYFRTFLMYGFHFLVWFLCVKGIRDTQCGFKLLTREAAARTFSSLHI 255

Query:   290 QRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLW 349
             +RWAFDVELL+IA+ L IP+AEV+VNWTEIEGSK+VP +SW+QMG D+L I L Y  G W
Sbjct:   256 ERWAFDVELLYIAQCLQIPIAEVAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAW 315

Query:   350 KIK 352
             ++K
Sbjct:   316 RLK 318

GO:0004581 "dolichyl-phosphate beta-glucosyltransferase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|J9P6U5 ALG5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 141/286 (49%), Positives = 188/286 (65%)

Query:    67 ERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTF 126
             E+ FL+ K GQ+   PS+ D P+  LSV+VP+YNE+ RL  M+DE + +L +R+K+ PTF
Sbjct:    10 EKFFLNAK-GQKETLPSVWDSPTKQLSVVVPSYNEEKRLPVMMDEALGYLEKRQKQDPTF 68

Query:   127 KYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXXXXXXAVTLGTKCARGSIILF 186
              YE+IVV DGS D+T +V  +Y +K G D V             A+ +G   +RG  IL 
Sbjct:    69 TYEVIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVKNRGKGGAIKMGIFSSRGEKILM 128

Query:   187 ADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR 246
             ADADGAT+F                 + E    A  C     GSRAHLE  +  QRS+FR
Sbjct:   129 ADADGATQFPDIEKLEKGLNDLQ--PWPEQM--AIAC-----GSRAHLEKESIAQRSYFR 179

Query:   247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLH 306
              +LM GFHF+VWF  V+ IRDTQCGFKLFTR++A + FSS+H++RWAFDVELL+IA+   
Sbjct:   180 TLLMYGFHFLVWFLCVKGIRDTQCGFKLFTREAASRTFSSLHIERWAFDVELLYIAQFFK 239

Query:   307 IPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK 352
             IP+AE++VNWTEIEGSK+VP +SW+QMG D+L I L Y  G W+++
Sbjct:   240 IPIAEIAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLE 285

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

RGD|1308900 Alg5 "ALG5, dolichyl-phosphate beta-glucosyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 142/286 (49%), Positives = 186/286 (65%)

Query:    67 ERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTF 126
             E+ FL+ + GQ+   PS+ D P+  LSV+VP+YNE+ RL  M+DE + +L +R+K   TF
Sbjct:    43 EKFFLNAR-GQKEALPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALNYLEKRQKHDRTF 101

Query:   127 KYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXXXXXXAVTLGTKCARGSIILF 186
              YE+IVV DGS D+T +V  +Y +K G D V             AV +G   +RG  IL 
Sbjct:   102 TYEVIVVDDGSEDQTSKVALKYCQKYGSDKVRVITLVQNRGKGGAVRMGVFSSRGEKILM 161

Query:   187 ADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR 246
             ADADGATKF                 + E    A  C     GSRAHLE  +  QRS+FR
Sbjct:   162 ADADGATKFPDVEKLEKGLSDLQ--PWPEQM--AIAC-----GSRAHLEKESIAQRSYFR 212

Query:   247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLH 306
              +LM GFHF+VWF  V+ IRDTQCGFKL TR++A + FSS+H++RWAFDVELL+IA+ L 
Sbjct:   213 TLLMYGFHFLVWFLCVKGIRDTQCGFKLLTREAAARTFSSLHIERWAFDVELLYIAQFLQ 272

Query:   307 IPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK 352
             IP+AEV+VNWTEIEGSK+VP +SW+QMG D+L I L Y  G W+++
Sbjct:   273 IPIAEVAVNWTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLE 318

GO:0007368 "determination of left/right symmetry" evidence=IEA;ISO

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|E1BUU9 ALG5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 139/286 (48%), Positives = 190/286 (66%)

Query:    67 ERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTF 126
             E+ F+  + G++   PS+ D P+  LSV+VP+YNE+DRL  M+DE +++L +R+K+ P+F
Sbjct:    10 EKFFVSAE-GRKEPVPSIHDPPTKELSVVVPSYNEEDRLPLMMDEALDYLEKRQKRDPSF 68

Query:   127 KYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXXXXXXAVTLGTKCARGSIILF 186
              YE+IVV DGS D+T +V+ +   + G D V             AV +G   +RG  IL 
Sbjct:    69 TYEVIVVDDGSKDQTTEVMVELLRENGSDKVRVLSLVKNRGKGGAVRMGVLSSRGKKILM 128

Query:   187 ADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR 246
             ADADGATKFA               + +     A  C     GSRAHLE  +  +RS+FR
Sbjct:   129 ADADGATKFADIEKVE---------EEVHLNQMAISC-----GSRAHLEKDSIAKRSYFR 174

Query:   247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLH 306
              +LM GFHF+VWF  V+ IRDTQCGFKL TR++AL+ FS++HV+RWAFDVELL+IA+ L 
Sbjct:   175 TLLMYGFHFLVWFLCVKKIRDTQCGFKLLTREAALRTFSTLHVERWAFDVELLYIAQHLR 234

Query:   307 IPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK 352
             IP+AEV+VNWTEIEGSK+VP +SW+QMG D+L I L Y  G W+++
Sbjct:   235 IPIAEVAVNWTEIEGSKLVPFWSWLQMGRDLLFIRLRYMTGAWQLE 280

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

UNIPROTKB|E1C2H8 ALG5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 140/286 (48%), Positives = 190/286 (66%)

Query:    67 ERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTF 126
             E+ F+  + G++   PS+ D P+  LSV+VP+YNE+DRL  M+DE +++L +R+K+ P+F
Sbjct:    10 EKFFVSAE-GRKEPVPSIHDPPTKELSVVVPSYNEEDRLPLMMDEALDYLEKRQKRDPSF 68

Query:   127 KYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVXXXXXXXXXXXXXAVTLGTKCARGSIILF 186
              YE+IVV DGS D+T +V  +   + G D V             AV +G   +RG  IL 
Sbjct:    69 TYEVIVVDDGSKDQTTEV--ELLRENGSDKVRVLSLVKNRGKGGAVRMGVLSSRGKKILM 126

Query:   187 ADADGATKFAXXXXXXXXXXXXXXGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR 246
             ADADGATKFA                +   KN  A    +  GSRAHLE  +  +RS+FR
Sbjct:   127 ADADGATKFADIEKVEEGLKNLQ--PWPLSKNQMA----ISCGSRAHLEKDSIAKRSYFR 180

Query:   247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLH 306
              +LM GFHF+VWF  V+ IRDTQCGFKL TR++AL+ FS++HV+RWAFDVELL+IA+ L 
Sbjct:   181 TLLMYGFHFLVWFLCVKKIRDTQCGFKLLTREAALRTFSTLHVERWAFDVELLYIAQHLR 240

Query:   307 IPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK 352
             IP+AEV+VNWTEIEGSK+VP +SW+QMG D+L I L Y  G W+++
Sbjct:   241 IPIAEVAVNWTEIEGSKLVPFWSWLQMGRDLLFIRLRYMTGAWQLE 286

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!
4th Layer	2.4.1.80	LOW CONFIDENCE prediction!
4th Layer	2.4.1.117	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	569
cd04188	211	cd04188, DPG_synthase, DPG_synthase is involved in	1e-107
PTZ00260	333	PTZ00260, PTZ00260, dolichyl-phosphate beta-glucos	1e-106
cd04179	185	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_l	4e-52
pfam00535	168	pfam00535, Glycos_transf_2, Glycosyl transferase f	2e-20
cd06442	224	cd06442, DPM1_like, DPM1_like represents putative	2e-19
cd04187	181	cd04187, DPM1_like_bac, Bacterial DPM1_like enzyme	5e-19
cd00761	156	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase	9e-18
COG0463	291	COG0463, WcaA, Glycosyltransferases involved in ce	7e-17
cd06423	180	cd06423, CESA_like, CESA_like is the cellulose syn	5e-15
cd06439	251	cd06439, CESA_like_1, CESA_like_1 is a member of t	1e-14
cd02525	249	cd02525, Succinoglycan_BP_ExoA, ExoA is involved i	7e-14
PRK11204	420	PRK11204, PRK11204, N-glycosyltransferase; Provisi	3e-13
TIGR03937	407	TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glu	2e-12
TIGR04283	220	TIGR04283, glyco_like_mftF, transferase 2, rSAM/se	1e-10
cd04192	229	cd04192, GT_2_like_e, Subfamily of Glycosyltransfe	7e-10
COG1215	439	COG1215, COG1215, Glycosyltransferases, probably i	1e-09
PRK10714	325	PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy	7e-09
cd02522	221	cd02522, GT_2_like_a, GT_2_like_a represents a gly	8e-09
PLN02726	243	PLN02726, PLN02726, dolichyl-phosphate beta-D-mann	1e-08
PRK10073	328	PRK10073, PRK10073, putative glycosyl transferase;	5e-08
TIGR03965	467	TIGR03965, mycofact_glyco, mycofactocin system gly	1e-06
PRK14583	444	PRK14583, hmsR, N-glycosyltransferase; Provisional	9e-06
PRK13915	306	PRK13915, PRK13915, putative glucosyl-3-phosphogly	3e-05
pfam13641	229	pfam13641, Glyco_tranf_2_3, Glycosyltransferase li	2e-04
pfam10111	278	pfam10111, Glyco_tranf_2_2, Glycosyltransferase li	4e-04
cd02511	229	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS	9e-04
TIGR04182	293	TIGR04182, glyco_TIGR04182, glycosyltransferase, T	0.003
cd04196	214	cd04196, GT_2_like_d, Subfamily of Glycosyltransfe	0.003

>gnl|CDD|133031 cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation

 Score =  321 bits (824), Expect = e-107
 Identities = 119/230 (51%), Positives = 147/230 (63%), Gaps = 19/230 (8%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG 153
           V++PAYNE+ RL P L+E +E+L ER    P+F YEIIVV DGS D T +V  +   K  
Sbjct: 1   VVIPAYNEEKRLPPTLEEAVEYLEER----PSFSYEIIVVDDGSKDGTAEVARKLARKNP 56

Query: 154 EDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDY 213
             I R L L KNRGKGGAV  G   ARG  ILFADAD AT F +LEKLE+ LK      Y
Sbjct: 57  ALI-RVLTLPKNRGKGGAVRAGMLAARGDYILFADADLATPFEELEKLEEALKT---SGY 112

Query: 214 IEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFK 273
                       + +GSRAHL + A V+RS+ RN+L +GF+F+V       I+DTQCGFK
Sbjct: 113 -----------DIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLVRLLLGLGIKDTQCGFK 161

Query: 274 LFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSK 323
           LFTR +A +LF  +H++RWAFDVELL +A  L  P+ EV V W EI GSK
Sbjct: 162 LFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVPVRWVEIPGSK 211

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. Length = 211

>gnl|CDD|240336 PTZ00260, PTZ00260, dolichyl-phosphate beta-glucosyltransferase; Provisional

 Score =  322 bits (828), Expect = e-106
 Identities = 144/345 (41%), Positives = 204/345 (59%), Gaps = 39/345 (11%)

Query: 24  PILTEFEIH-CYIALFLVCGI--LSYAYRSFKTKNPFPDIDFLSKGERVFLDVKTGQELE 80
            I      H   I L LV G+  L Y Y S+               ++V   VK+    E
Sbjct: 3   NIWKVIFKHRMLIVLGLVVGLALLFYPYISWPDD------------DKVIRQVKSSVIHE 50

Query: 81  FPSLDD----------EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEI 130
                D          +  V+LS+++PAYNE+DRL  ML ETI++L  R +K P FKYEI
Sbjct: 51  KSKEVDKENYINNILKDSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEI 110

Query: 131 IVVSDGSTDKTMQVVHQY-TEKCGEDI-VRGLKLLKNRGKGGAVTLGTKCARGSIILFAD 188
           I+V+DGS DKT++V   +  +    +I +R L LL+N+GKGGAV +G   +RG  IL  D
Sbjct: 111 IIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRNKGKGGAVRIGMLASRGKYILMVD 170

Query: 189 ADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHL-EALANVQRSFFRN 247
           ADGAT   D +KLED + ++                G++ GSR HL ++    +R ++RN
Sbjct: 171 ADGATDIDDFDKLEDIMLKIEQNGL-----------GIVFGSRNHLVDSDVVAKRKWYRN 219

Query: 248 ILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHI 307
           ILM GFHFIV       ++DTQCGFKLFTR++A  +F S+H++RWAFD+E++ IA+ L++
Sbjct: 220 ILMYGFHFIVNTICGTNLKDTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNL 279

Query: 308 PMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK 352
           P+AEV VNWTE+EGSK+  + + IQM  D+L +   Y LG+WK+K
Sbjct: 280 PIAEVPVNWTEVEGSKLNVISASIQMARDILLVRSFYLLGIWKVK 324

Length = 333

>gnl|CDD|133022 cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

 Score =  175 bits (447), Expect = 4e-52
 Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 24/209 (11%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG 153
           V++PAYNE++ +  +++  +  L E       + YEIIVV DGSTD T ++  +   +  
Sbjct: 1   VVIPAYNEEENIPELVERLLAVLEE------GYDYEIIVVDDGSTDGTAEIARELAARVP 54

Query: 154 EDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDY 213
              VR ++L +N GKG AV  G K ARG I++  DAD      D+ KL +KL E   G  
Sbjct: 55  R--VRVIRLSRNFGKGAAVRAGFKAARGDIVVTMDADLQHPPEDIPKLLEKLLE---GGA 109

Query: 214 IEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFK 273
             D         V++GSR              R +  + F+F++       I DTQ GF+
Sbjct: 110 --D---------VVIGSRFVRGG--GAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFR 156

Query: 274 LFTRKSALQLFSSIHVQRWAFDVELLFIA 302
           LF R+    L S +    + F +ELL  A
Sbjct: 157 LFRREVLEALLSLLESNGFEFGLELLVGA 185

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 185

>gnl|CDD|215980 pfam00535, Glycos_transf_2, Glycosyl transferase family 2

 Score = 88.3 bits (219), Expect = 2e-20
 Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 24/192 (12%)

Query: 93  SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKC 152
           SVI+P YNE+  L+    ET+E L  +  K     +EIIVV DGSTD T+++  +Y +  
Sbjct: 1   SVIIPTYNEEKYLE----ETLESLLNQTYK----NFEIIVVDDGSTDGTVEIAEEYAKN- 51

Query: 153 GEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGD 212
            +  VR ++L +N GK  A   G K A G  I F DAD       LEKL + L++     
Sbjct: 52  -DPRVRVIRLEENLGKAAARNAGLKLATGDYIAFLDADDEVAPDWLEKLVELLEK----- 105

Query: 213 YIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGF 272
                        +++GSR  +     +     R  L+     +   +    +       
Sbjct: 106 ---------NGADIVIGSRVVINGETRLYGRALRFELLLLLGKLGARSLGLKVLFLIGSN 156

Query: 273 KLFTRKSALQLF 284
            L+ R+   +L 
Sbjct: 157 ALYRREVLEELL 168

Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. Length = 168

>gnl|CDD|133062 cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1

 Score = 86.8 bits (216), Expect = 2e-19
 Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 30/235 (12%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG 153
           +I+P YNE++ +  +++     L           YEIIVV D S D T ++V +  ++  
Sbjct: 1   IIIPTYNERENIPELIERLDAALKG-------IDYEIIVVDDNSPDGTAEIVRELAKEYP 53

Query: 154 ED--IVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDG 211
               IVR       RG G A   G K ARG +I+  DAD +     + +L +   E    
Sbjct: 54  RVRLIVRP----GKRGLGSAYIEGFKAARGDVIVVMDADLSHPPEYIPELLEAQLE-GGA 108

Query: 212 DYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCG 271
           D             +++GSR ++E          R ++ +G + +      R + D   G
Sbjct: 109 D-------------LVIGSR-YVEGGGVEGWGLKRKLISRGANLLARLLLGRKVSDPTSG 154

Query: 272 FKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTE-IEG-SKI 324
           F+ + R+   +L  S+  + + F +ELL  A  L   + EV + + +   G SK+
Sbjct: 155 FRAYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGESKL 209

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 224

>gnl|CDD|133030 cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1

 Score = 84.5 bits (210), Expect = 5e-19
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 30/186 (16%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG 153
           ++VP YNE++ L  + +     L         + YEII V DGSTD+T++++ +   +  
Sbjct: 1   IVVPVYNEEENLPELYERLKAVLES-----LGYDYEIIFVDDGSTDRTLEILRELAARDP 55

Query: 154 EDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDY 213
              V+ ++L +N G+  A+  G   ARG  ++  DAD       + ++  K +E  D   
Sbjct: 56  R--VKVIRLSRNFGQQAALLAGLDHARGDAVITMDADLQDPPELIPEMLAKWEEGYD--- 110

Query: 214 IEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIV-WFTGVRTIRDTQCGF 272
                       V+ G R       N + S+ + +  K F+ ++   +GV    +    F
Sbjct: 111 ------------VVYGVR------KNRKESWLKRLTSKLFYRLINKLSGVDIPDNG-GDF 151

Query: 273 KLFTRK 278
           +L  RK
Sbjct: 152 RLMDRK 157

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily. Length = 181

>gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

 Score = 80.2 bits (198), Expect = 9e-18
 Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 17/173 (9%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG 153
           VI+PAYNE    +P L+  +E L           +E+IVV DGSTD T++++ +Y +K  
Sbjct: 1   VIIPAYNE----EPYLERCLESL----LAQTYPNFEVIVVDDGSTDGTLEILEEYAKK-- 50

Query: 154 EDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDY 213
           +  V  +   +N+G   A   G K ARG  ILF DAD          L D L+ L     
Sbjct: 51  DPRVIRVINEENQGLAAARNAGLKAARGEYILFLDADDLL-------LPDWLERLVAELL 103

Query: 214 IEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIR 266
            + + +A G  G ++  R  LE +     +         F   +   G    R
Sbjct: 104 ADPEADAVGGPGNLLFRRELLEEIGGFDEALLSGEEDDDFLLRLLRGGKVAFR 156

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities. Length = 156

>gnl|CDD|223539 COG0463, WcaA, Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

 Score = 81.3 bits (199), Expect = 7e-17
 Identities = 55/282 (19%), Positives = 99/282 (35%), Gaps = 24/282 (8%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           +SV++P YNE++ L   L+  +    +         +EIIVV DGSTD T ++  +Y  K
Sbjct: 5   VSVVIPTYNEEEYLPEALESLLNQTYK--------DFEIIVVDDGSTDGTTEIAIEYGAK 56

Query: 152 CGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDG 211
               I    +  +N G G A   G + ARG  I+F DAD         +L   +    DG
Sbjct: 57  DVRVIRLINE--RNGGLGAARNAGLEYARGDYIVFLDADDQHP----PELIPLVAAGGDG 110

Query: 212 DYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCG 271
           DYI   ++       I   R  L  L  +  +    +L+      +       +RD   G
Sbjct: 111 DYIARLDDR----DDIWLPRKLLSKLVKLLGNRLLGVLIPDGFGDLRL----LVRDAVDG 162

Query: 272 FKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIE--GSKIVPVFS 329
            + F    +  L   +          L ++     +  ++  +    +      +     
Sbjct: 163 LRAFLEGRSRFLRLLLRKLVLIRREVLEYLLLYRLLGASKRVLLGKLLRLGLLLLDSKLK 222

Query: 330 WIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVY 371
            + +   +L       L +  +  +    R +          
Sbjct: 223 AVPLDLLLLLGLFIALLSILLLLLLLLLRRLLGANLSEKGKP 264

Length = 291

>gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily

 Score = 73.0 bits (180), Expect = 5e-15
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 11/98 (11%)

Query: 94  VIVPAYNEQDRLKPMLDETIE-FLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKC 152
           +IVPAYNE+     +++ TIE  L     K      E+IVV DGSTD T++++ +     
Sbjct: 1   IIVPAYNEEA----VIERTIESLLALDYPK-----LEVIVVDDGSTDDTLEILEELAALY 51

Query: 153 GEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
              ++  ++  +N GK GA+  G + A+G I++  DAD
Sbjct: 52  IRRVLV-VRDKENGGKAGALNAGLRHAKGDIVVVLDAD 88

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan. Length = 180

>gnl|CDD|133061 cd06439, CESA_like_1, CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 18/123 (14%)

Query: 71  LDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEI 130
           L     +    P     P+V  ++I+PAYNE+  ++  L+  +  L+  R ++     EI
Sbjct: 12  LARLRPKPPSLPDPAYLPTV--TIIIPAYNEEAVIEAKLENLLA-LDYPRDRL-----EI 63

Query: 131 IVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL---KNRGKGGAVTLGTKCARGSIILFA 187
           IVVSDGSTD T ++  +Y +K       G+KLL   + RGK  A+      A G I++F 
Sbjct: 64  IVVSDGSTDGTAEIAREYADK-------GVKLLRFPERRGKAAALNRALALATGEIVVFT 116

Query: 188 DAD 190
           DA+
Sbjct: 117 DAN 119

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Length = 251

>gnl|CDD|133016 cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan

 Score = 71.5 bits (176), Expect = 7e-14
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 15/102 (14%)

Query: 93  SVIVPAYNEQDRLKPMLDETIE-FLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           S+I+P  NE+  ++    E +E  LN+     P    EIIVV  GSTD T ++V +Y  K
Sbjct: 3   SIIIPVRNEEKYIE----ELLESLLNQSY---PKDLIEIIVVDGGSTDGTREIVQEYAAK 55

Query: 152 CGEDIVRGLKLLKNRGK--GGAVTLGTKCARGSIILFADADG 191
                   ++L+ N  +     + +G + +RG II+  DA  
Sbjct: 56  DPR-----IRLIDNPKRIQSAGLNIGIRNSRGDIIIRVDAHA 92

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus. Length = 249

>gnl|CDD|236882 PRK11204, PRK11204, N-glycosyltransferase; Provisional

 Score = 71.5 bits (176), Expect = 3e-13
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 12/109 (11%)

Query: 82  PSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT 141
             L + P V  S++VP YNE + +    +ETI  L     + P   YE+I ++DGS+D T
Sbjct: 48  AQLKEYPGV--SILVPCYNEGENV----EETISHLL--ALRYP--NYEVIAINDGSSDNT 97

Query: 142 MQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
            +++ +   +     +R + L +N+GK  A+  G   AR   ++  D D
Sbjct: 98  GEILDRLAAQ--IPRLRVIHLAENQGKANALNTGAAAARSEYLVCIDGD 144

Length = 420

>gnl|CDD|188452 TIGR03937, PgaC_IcaA, poly-beta-1,6 N-acetyl-D-glucosamine synthase

 Score = 69.2 bits (170), Expect = 2e-12
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 16/124 (12%)

Query: 67  ERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTF 126
           ER +   +T      P LD+ P V  S++VP YNE   +    +ETI  L   R   P  
Sbjct: 28  ERKWPLPRTPP----PPLDEYPGV--SILVPCYNEGANV----EETISHLLALR--YP-- 73

Query: 127 KYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILF 186
            +EII ++DGS D T +++ +   +  +  +R + L +N+GK  A+  G   A+   ++ 
Sbjct: 74  NFEIIAINDGSKDNTAEILDRLAAQ--DPRLRVIHLAENQGKANALNTGLLAAKYEYLVC 131

Query: 187 ADAD 190
            D D
Sbjct: 132 IDGD 135

Members of this protein family are biofilm-forming enzymes that polymerize N-acetyl-D-glucosamine residues in beta(1,6) linkage. One named members is IcaA (intercellular adhesin protein A), an enzyme that acts (with aid of subunit IcaD) in Polysaccharide Intercellular Adhesin (PIA) biosynthesis in Staphylococcus epidermis). The homologous member in E. coli is designated PgaC. Members are often encoded next to a polysaccharide deacetylase and involved in biofilm formation. Note that chitin, although also made from N-acetylglucosamine, is formed with beta-1,4 linkages. Length = 407

>gnl|CDD|234532 TIGR04283, glyco_like_mftF, transferase 2, rSAM/selenodomain-associated

 Score = 61.4 bits (150), Expect = 1e-10
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 20/100 (20%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           LS+I+P  NE   L  +L +      +          E+IVV  GSTD T+++       
Sbjct: 1   LSIIIPVLNEAATLPELLADLQALPGD---------AEVIVVDGGSTDGTVEIARSL--- 48

Query: 152 CGEDIVRGLKLLKN-RGKGGAVTLGTKCARGSIILFADAD 190
                  G K++ + +G+   +  G   A+G I+LF  AD
Sbjct: 49  -------GAKVIHSPKGRARQMNAGAALAKGDILLFLHAD 81

This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine [Unknown function, Enzymes of unknown specificity]. Length = 220

>gnl|CDD|133035 cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 15/102 (14%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG 153
           V++ A NE + L  +L  ++  L+      P  K+E+I+V D STD T+Q++     K  
Sbjct: 1   VVIAARNEAENLPRLLQ-SLSALD-----YPKEKFEVILVDDHSTDGTVQILEFAAAK-- 52

Query: 154 EDIVRGLKLLKNR-----GKGGAVTLGTKCARGSIILFADAD 190
               + LK+L N      GK  A+T   K A+G  I+  DAD
Sbjct: 53  -PNFQ-LKILNNSRVSISGKKNALTTAIKAAKGDWIVTTDAD 92

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 229

>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

 Score = 60.7 bits (147), Expect = 1e-09
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 15/103 (14%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           +SVI+PAYNE+        E +E   E        +YE+IVV DGSTD+T +++    E+
Sbjct: 56  VSVIIPAYNEEP-------EVLEETLESLLSQDYPRYEVIVVDDGSTDETYEIL----EE 104

Query: 152 CGEDIVRGLKLL----KNRGKGGAVTLGTKCARGSIILFADAD 190
            G +     +++    KN GK GA+  G K A+G +++  DAD
Sbjct: 105 LGAEYGPNFRVIYPEKKNGGKAGALNNGLKRAKGDVVVILDAD 147

Length = 439

>gnl|CDD|182669 PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

 Score = 57.1 bits (138), Expect = 7e-09
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 27/191 (14%)

Query: 87  EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVH 146
            P   +SV++P YNEQ+ L  ++  T        K     +YEI+++ DGS+D + +++ 
Sbjct: 3   HPIKKVSVVIPVYNEQESLPELIRRTTAACESLGK-----EYEILLIDDGSSDNSAEMLV 57

Query: 147 QYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLK 206
           +  +     IV  L L +N G+  A+  G     G +I+  DAD      ++ +L  K  
Sbjct: 58  EAAQAPDSHIVAIL-LNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKAD 116

Query: 207 ELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIR 266
           E  D                +VG+        N Q S+FR    K  + ++  T  + + 
Sbjct: 117 EGYD----------------VVGTVR-----QNRQDSWFRKTASKMINRLIQRTTGKAMG 155

Query: 267 DTQCGFKLFTR 277
           D  C  + + R
Sbjct: 156 DYGCMLRAYRR 166

Length = 325

>gnl|CDD|133013 cd02522, GT_2_like_a, GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 17/99 (17%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           LS+I+P  NE + L       +  L  RR        EIIVV  GSTD T+ +       
Sbjct: 1   LSIIIPTLNEAENLPR----LLASL--RRLNPLPL--EIIVVDGGSTDGTVAIARSA--- 49

Query: 152 CGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
            G  ++        +G+   +  G   ARG  +LF  AD
Sbjct: 50  -GVVVISS-----PKGRARQMNAGAAAARGDWLLFLHAD 82

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 221

>gnl|CDD|215385 PLN02726, PLN02726, dolichyl-phosphate beta-D-mannosyltransferase

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 40/103 (38%), Positives = 50/103 (48%), Gaps = 16/103 (15%)

Query: 93  SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFK-YEIIVVSDGSTDKTMQVVHQYTEK 151
           S+IVP YNE+  +       I +L    K +   K +EIIVV DGS D T  VV Q  + 
Sbjct: 12  SIIVPTYNERLNIA-----LIVYL--IFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKV 64

Query: 152 CGEDIV----RGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
            GED +    R  KL    G G A   G K A G  ++  DAD
Sbjct: 65  YGEDRILLRPRPGKL----GLGTAYIHGLKHASGDFVVIMDAD 103

Length = 243

>gnl|CDD|182223 PRK10073, PRK10073, putative glycosyl transferase; Provisional

 Score = 54.7 bits (132), Expect = 5e-08
 Identities = 51/204 (25%), Positives = 69/204 (33%), Gaps = 46/204 (22%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           LS+I+P YN     +  + E++               EII+V+DGSTD ++++   Y E 
Sbjct: 8   LSIIIPLYNAGKDFRAFM-ESLIAQTWTA-------LEIIIVNDGSTDNSVEIAKHYAEN 59

Query: 152 CGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKL-----EDKLK 206
                VR L    N G   A   G   A G  + F DAD        E L     ED L 
Sbjct: 60  YPH--VRLLH-QANAGVSVARNTGLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLD 116

Query: 207 ELT-DGDYIEDKNNAA---------GCNGVIVGSRAHLEALA----------NVQRSFFR 246
               + D+                    GV+ G      AL+           V R  F 
Sbjct: 117 VAQCNADWCFRDTGETWQSIPSDRLRSTGVLSGPDWLRMALSSRRWTHVVWLGVYRRDF- 175

Query: 247 NILMKGFHF--------IVWFTGV 262
            I+     F        I W T V
Sbjct: 176 -IVKNNIKFEPGLHHQDIPWTTEV 198

Length = 328

>gnl|CDD|234419 TIGR03965, mycofact_glyco, mycofactocin system glycosyltransferase

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 13/110 (11%)

Query: 82  PSLDDE-PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDK 140
           P+L    PSV  +V+VP  N    L  +L              P  + E+IVV DGS D 
Sbjct: 67  PALLPSPPSV--TVVVPVRNRPAGLARLLAAL------LALDYPRDRLEVIVVDDGSEDP 118

Query: 141 TMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
                     +     VR ++  + +G   A   G + AR   + F D+D
Sbjct: 119 V-PTRAARGARLP---VRVIRHPRRQGPAAARNAGARAARTEFVAFTDSD 164

Members of this protein family are putative glycosyltransferases, members of pfam00535 (glycosyl transferase family 2). Members appear mostly in the Actinobacteria, where they appear to be part of a system for converting a precursor peptide (TIGR03969) into a novel redox carrier designated mycofactocin. A radical SAM enzyme, TIGR03962, is a proposed to be a key maturase for mycofactocin. Length = 467

>gnl|CDD|184755 PRK14583, hmsR, N-glycosyltransferase; Provisional

 Score = 48.1 bits (114), Expect = 9e-06
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 14/118 (11%)

Query: 74  KTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEF-LNERRKKIPTFKYEIIV 132
             G ++  P L   P V  S++VP +NE    +    ETI   L +    I     E+I 
Sbjct: 61  PWGDDVPAPELKGHPLV--SILVPCFNEGLNAR----ETIHAALAQTYTNI-----EVIA 109

Query: 133 VSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
           ++DGS+D T QV+     +  +  +R + L  N+GK  A+ +G   AR   ++  D D
Sbjct: 110 INDGSSDDTAQVLDALLAE--DPRLRVIHLAHNQGKAIALRMGAAAARSEYLVCIDGD 165

Length = 444

>gnl|CDD|237556 PRK13915, PRK13915, putative glucosyl-3-phosphoglycerate synthase; Provisional

 Score = 46.1 bits (110), Expect = 3e-05
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 38/114 (33%)

Query: 93  SVIVPAYNEQ-------DRLKPMLDET-IEFLNERRKKIPTFKYEIIVVSDGSTDKTMQ- 143
           SV++PA NE+       D ++P+L E  ++              E+IV+  GSTD T + 
Sbjct: 34  SVVLPALNEEETVGKVVDSIRPLLMEPLVD--------------ELIVIDSGSTDATAER 79

Query: 144 -------VVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
                  VV +      E+I+  L      GKG A+        G I++F DAD
Sbjct: 80  AAAAGARVVSR------EEILPELPPR--PGKGEALWRSLAATTGDIVVFVDAD 125

Length = 306

>gnl|CDD|222281 pfam13641, Glyco_tranf_2_3, Glycosyltransferase like family 2

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 11/102 (10%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQY--- 148
           ++V+VP +NE   L   L   +     R         E+IVV DGS D+T+ V  +    
Sbjct: 3   VAVVVPTWNEDKVLGRTLRSILAQDYPR--------LEVIVVVDGSDDETLDVARELAAA 54

Query: 149 TEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
                  +VR  +     GK  A+    +  +  +++  DAD
Sbjct: 55  YPDVRVHVVRRPRPPGPTGKARALNEALRAIKSDLVVLLDAD 96

Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 229

>gnl|CDD|220577 pfam10111, Glyco_tranf_2_2, Glycosyltransferase like family 2

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 25/119 (21%), Positives = 38/119 (31%), Gaps = 7/119 (5%)

Query: 93  SVIVPAYNEQDRLKPMLDETIEFLNERRKKI-PTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           SVI+P Y         + + ++    R          EIIVV   S     + + +   K
Sbjct: 1   SVIIPVYL--SLRTRDILKRLQSCLNRLSYFLSDPDVEIIVVDGDSPLSFAKELKKIIAK 58

Query: 152 CGEDIVRGLKLLKNR-GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELT 209
            G       K  K+      A   G + +    I F D D        + LE  +K   
Sbjct: 59  NGAINYISHKTHKDLFSPAKARNRGAEYSSSDFIFFLDVD---CLISPDTLEKIIKHFQ 114

Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis. Length = 278

>gnl|CDD|133005 cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide

 Score = 40.7 bits (96), Expect = 9e-04
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 19/100 (19%)

Query: 91  NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTE 150
            LSV++   NE+  ++  L E++++  +          EIIVV  GSTD+T+++  +Y  
Sbjct: 1   TLSVVIITKNEERNIERCL-ESVKWAVD----------EIIVVDSGSTDRTVEIAKEYGA 49

Query: 151 KCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
           K    + +        G G       + A    +L  DAD
Sbjct: 50  K----VYQ----RWWDGFGAQRNFALELATNDWVLSLDAD 81

UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core. Length = 229

>gnl|CDD|200433 TIGR04182, glyco_TIGR04182, glycosyltransferase, TIGR04182 family

 Score = 39.6 bits (93), Expect = 0.003
 Identities = 49/229 (21%), Positives = 90/229 (39%), Gaps = 52/229 (22%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFK----YEIIVVSDGSTDKTMQVVHQYT 149
           V++P  NE   +  ++D               F+     +I+V+   STD T ++  +  
Sbjct: 4   VLIPTLNEAATIGDVIDG--------------FQELGYSDILVIDGNSTDGTQEIAKEA- 48

Query: 150 EKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELT 209
              G  +V    +   +GKG AV    +      +L  D DG    AD + L + L    
Sbjct: 49  ---GARVV----IQSGKGKGQAVREAFELIDAPYVLMLDGDGTYLPADADALLEPL---- 97

Query: 210 DGDYIEDKNNAAGCNGVIVGSR-AHLEALANVQRSFFRN-ILMKGFHFIVWFTGVRTIRD 267
                      +G    ++G+R A +E  A  + +   N ++ + F  I    GV  +RD
Sbjct: 98  ----------LSGRADHVIGNRFADMEPGAFTRLNLVGNRLINRLFRII---HGVD-LRD 143

Query: 268 TQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLH--IPMAEVSV 314
              G++ FTR+S       + +    F++E     E +   + +  V +
Sbjct: 144 ILSGYRAFTRES----IRRMELTETGFEIETEIAVECVKKNLRVEVVPI 188

Members of this family are glycosyltransferases restricted to the archaea. All but two members are from species with the PGF-CTERM/archaeosortase A system, a proposed maturation system for exported, glycosylated proteins as are found often in S-layers. Length = 293

>gnl|CDD|133039 cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT---LGTKCARGSIIL 185
           E+I+  DGSTD T++++ +Y +K        + L++N    G         + A G  + 
Sbjct: 29  ELIISDDGSTDGTVEIIKEYIDK----DPFIIILIRNGKNLGVARNFESLLQAADGDYVF 84

Query: 186 FADAD 190
           F D D
Sbjct: 85  FCDQD 89

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families. Length = 214

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	569
PTZ00260	333	dolichyl-phosphate beta-glucosyltransferase; Provi	100.0
KOG2977|consensus	323		100.0
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	100.0
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	99.97
KOG2978|consensus	238		99.97
PRK11204	420	N-glycosyltransferase; Provisional	99.97
PRK14583	444	hmsR N-glycosyltransferase; Provisional	99.96
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	99.96
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	99.96
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	99.96
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	99.95
PRK10714	325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	99.95
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	99.95
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	99.94
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	99.94
PRK11498	852	bcsA cellulose synthase catalytic subunit; Provisi	99.93
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	99.93
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	99.93
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	99.93
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	99.93
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.93
COG1215	439	Glycosyltransferases, probably involved in cell wa	99.93
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	99.92
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.92
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	99.91
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.91
cd06913	219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	99.91
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	99.91
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.91
PRK13915	306	putative glucosyl-3-phosphoglycerate synthase; Pro	99.9
PRK10073	328	putative glycosyl transferase; Provisional	99.9
PRK14716	504	bacteriophage N4 adsorption protein B; Provisional	99.9
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.9
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.89
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	99.88
PRK10063	248	putative glycosyl transferase; Provisional	99.88
cd04190	244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.88
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.88
cd06438	183	EpsO_like EpsO protein participates in the methano	99.87
cd04191	254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	99.87
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.87
PRK11234	727	nfrB bacteriophage N4 adsorption protein B; Provis	99.86
PRK10018	279	putative glycosyl transferase; Provisional	99.86
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	99.86
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.85
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.85
PRK05454	691	glucosyltransferase MdoH; Provisional	99.85
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.84
cd02522	221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.84
cd06436	191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.83
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	99.82
PRK15489	703	nfrB bacteriophage N4 adsorption protein B; Provis	99.81
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	99.81
COG1216	305	Predicted glycosyltransferases [General function p	99.8
PF10111	281	Glyco_tranf_2_2: Glycosyltransferase like family 2	99.77
COG0463	291	WcaA Glycosyltransferases involved in cell wall bi	99.7
cd02511	229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	99.68
cd00761	156	Glyco_tranf_GTA_type Glycosyltransferase family A	99.59
KOG3736|consensus	578		99.24
KOG3737|consensus	603		99.24
KOG3738|consensus	559		99.22
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	99.11
KOG2547|consensus	431		99.05
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	98.9
PLN02893	734	Cellulose synthase-like protein	98.89
cd02514	334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	98.74
COG2943	736	MdoH Membrane glycosyltransferase [Cell envelope b	98.68
PF03142	527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	98.65
PF13712	217	Glyco_tranf_2_5: Glycosyltransferase like family;	98.43
PF13704	97	Glyco_tranf_2_4: Glycosyl transferase family 2	97.97
PLN02190	756	cellulose synthase-like protein	97.75
PLN02195	977	cellulose synthase A	97.74
PLN02189	1040	cellulose synthase	97.71
cd00899	219	b4GalT Beta-4-Galactosyltransferase is involved in	97.63
PLN02638	1079	cellulose synthase A (UDP-forming), catalytic subu	97.57
KOG2571|consensus	862		97.28
COG4092	346	Predicted glycosyltransferase involved in capsule	97.27
PF03452	269	Anp1: Anp1; InterPro: IPR005109 The members of thi	97.24
PF03071	434	GNT-I: GNT-I family; InterPro: IPR004139 The biosy	97.17
PLN02248	1135	cellulose synthase-like protein	97.13
PF05679	499	CHGN: Chondroitin N-acetylgalactosaminyltransferas	97.11
PLN02400	1085	cellulose synthase	96.97
PLN02915	1044	cellulose synthase A [UDP-forming], catalytic subu	96.49
TIGR02460	381	osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	96.46
PF06306	347	CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (	96.41
KOG3916|consensus	372		96.35
PRK14503	393	mannosyl-3-phosphoglycerate synthase; Provisional	96.26
PF09488	381	Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas	96.23
PF11735	241	CAP59_mtransfer: Cryptococcal mannosyltransferase	96.1
PLN02436	1094	cellulose synthase A	95.87
PF03552	720	Cellulose_synt: Cellulose synthase; InterPro: IPR0	95.05
KOG3588|consensus	494		94.67
PF11316	234	Rhamno_transf: Putative rhamnosyl transferase ; In	94.62
cd06915	223	NTP_transferase_WcbM_like WcbM_like is a subfamily	93.98
PF12804	160	NTP_transf_3: MobA-like NTP transferase domain; PD	93.6
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	93.6
PF13733	136	Glyco_transf_7N: N-terminal region of glycosyl tra	93.54
cd02508	200	ADP_Glucose_PP ADP-glucose pyrophosphorylase is in	93.44
PF11397	343	GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP	93.27
cd02540	229	GT2_GlmU_N_bac N-terminal domain of bacterial GlmU	93.2
PLN02917	293	CMP-KDO synthetase	92.92
TIGR00466	238	kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe	92.48
cd04181	217	NTP_transferase NTP_transferases catalyze the tran	92.38
cd04182	186	GT_2_like_f GT_2_like_f is a subfamily of the glyc	92.13
cd02516	218	CDP-ME_synthetase CDP-ME synthetase is involved in	90.48
PRK00317	193	mobA molybdopterin-guanine dinucleotide biosynthes	90.33
cd02503	181	MobA MobA catalyzes the formation of molybdopterin	90.25
PRK14352	482	glmU bifunctional N-acetylglucosamine-1-phosphate	90.11
PLN02458	346	transferase, transferring glycosyl groups	89.98
PF01697	285	Glyco_transf_92: Glycosyltransferase family 92; In	89.86
cd00218	223	GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I)	89.0
TIGR03310	188	matur_ygfJ molybdenum hydroxylase accessory protei	88.73
TIGR03202	190	pucB xanthine dehydrogenase accessory protein pucB	87.93
PRK14356	456	glmU bifunctional N-acetylglucosamine-1-phosphate	87.67
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	87.58
PRK05450	245	3-deoxy-manno-octulosonate cytidylyltransferase; P	87.42
TIGR02665	186	molyb_mobA molybdopterin-guanine dinucleotide bios	86.79
PRK13385	230	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans	86.2
cd02513	223	CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-	86.16
cd06425	233	M1P_guanylylT_B_like_N N-terminal domain of the M1	86.11
PF04666	297	Glyco_transf_54: N-Acetylglucosaminyltransferase-I	86.0
cd02518	233	GT2_SpsF SpsF is a glycosyltrnasferase implicated	85.81
cd04189	236	G1P_TT_long G1P_TT_long represents the long form o	85.41
COG2068	199	Uncharacterized MobA-related protein [General func	85.27
KOG3917|consensus	310		84.99
PF02709	78	Glyco_transf_7C: N-terminal domain of galactosyltr	84.77
PRK14355	459	glmU bifunctional N-acetylglucosamine-1-phosphate	84.43
PF03214	348	RGP: Reversibly glycosylated polypeptide; InterPro	84.25
PRK13368	238	3-deoxy-manno-octulosonate cytidylyltransferase; P	84.04
cd06428	257	M1P_guanylylT_A_like_N N-terminal domain of M1P_gu	83.71
TIGR03552	195	F420_cofC 2-phospho-L-lactate guanylyltransferase	83.31
PF00483	248	NTP_transferase: Nucleotidyl transferase This Pros	83.1
PF09258	247	Glyco_transf_64: Glycosyl transferase family 64 do	82.5
cd06422	221	NTP_transferase_like_1 NTP_transferase_like_1 is a	82.25
TIGR03584	222	PseF pseudaminic acid CMP-transferase. The sequenc	82.21
PRK02726	200	molybdopterin-guanine dinucleotide biosynthesis pr	82.11
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	82.08
PRK14360	450	glmU bifunctional N-acetylglucosamine-1-phosphate	82.02
PRK09451	456	glmU bifunctional N-acetylglucosamine-1-phosphate	81.74
PRK14357	448	glmU bifunctional N-acetylglucosamine-1-phosphate	80.98
KOG1476|consensus	330		80.49
TIGR01173	451	glmU UDP-N-acetylglucosamine diphosphorylase/gluco	80.34
TIGR00453	217	ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl	80.18
COG1212	247	KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase	80.08

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional

Probab=100.00  E-value=3.3e-36  Score=316.42  Aligned_cols=257  Identities=49%  Similarity=0.856  Sum_probs=224.3

Q ss_pred             CCCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhh--CCCeEEEEEcC
Q psy7267          86 DEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKC--GEDIVRGLKLL  163 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~--~~~~V~vi~~~  163 (569)
                      ....|.+|||||+|||++.|+++|+++.+++.+..-++|..++||+||||||+|+|.++++++.+++  ++.+++++.++
T Consensus        66 ~~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~  145 (333)
T PTZ00260         66 KDSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLL  145 (333)
T ss_pred             CCCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcC
Confidence            4567889999999999999999999999887642223455579999999999999999999987764  33569999999


Q ss_pred             CCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccc-cchhh
Q psy7267         164 KNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEAL-ANVQR  242 (569)
Q Consensus       164 ~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~-~~~~~  242 (569)
                      +|.|++.|+|.|+++|+||+|+++|+|+.++|++++++++.+.+..           .++.|+|+|+|....++ ....+
T Consensus       146 ~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~-----------~~~~dvV~GsR~~~~~~~~~~~~  214 (333)
T PTZ00260        146 RNKGKGGAVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIE-----------QNGLGIVFGSRNHLVDSDVVAKR  214 (333)
T ss_pred             CCCChHHHHHHHHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhh-----------ccCCceEEeeccccccCcccccC
Confidence            9999999999999999999999999999999999999999987521           14679999999754332 34566


Q ss_pred             HHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEecCC
Q psy7267         243 SFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGS  322 (569)
Q Consensus       243 ~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~GS  322 (569)
                      ++++++.++.++.+.+...+..+.|.+||+++|+|++++++++....++|.+|+|+.+++.+.|+++.++|+.|+++.+|
T Consensus       215 ~~~r~~~~~~~~~l~~~~~~~~i~D~~~Gfk~~~r~~~~~i~~~~~~~~~~fd~Ell~~a~~~g~~I~EvPv~~~~~~~S  294 (333)
T PTZ00260        215 KWYRNILMYGFHFIVNTICGTNLKDTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNWTEVEGS  294 (333)
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCcccCCCCeEEEeHHHHHHHhhhccccCccchHHHHHHHHHcCCCEEEEceeeEECCCC
Confidence            78888889988888889999999999999999999999999766667889999999999999999999999999998889


Q ss_pred             ccchhHHHHHHHHHHHHHHHHhcchhhHHHH
Q psy7267         323 KIVPVFSWIQMGWDVLNIWLHYTLGLWKIKA  353 (569)
Q Consensus       323 ~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~~  353 (569)
                      +...++..+++.+.+++.+..|..|.|.+..
T Consensus       295 k~~~~~~~~~~~~~l~~~~~~y~~~~~~~~~  325 (333)
T PTZ00260        295 KLNVISASIQMARDILLVRSFYLLGIWKVKD  325 (333)
T ss_pred             eechHHHHHHHHHHHHHHHHHHhcCeeeccC
Confidence            9988999999999999999999999988754

>KOG2977|consensus

Probab=100.00  E-value=6e-34  Score=282.69  Aligned_cols=286  Identities=52%  Similarity=0.860  Sum_probs=246.5

Q ss_pred             CCCcccccccccccccccccCcCcCCCCCCCC-CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEe
Q psy7267          56 PFPDIDFLSKGERVFLDVKTGQELEFPSLDDE-PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVS  134 (569)
Q Consensus        56 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVD  134 (569)
                      +.+..... +....+.++.+......|....+ ...-+|||||+|||+..|+..++...+.+++.....|.+.+||+|||
T Consensus        33 ~r~~~e~~-e~ei~~~d~g~~k~~~lp~~~d~~~~~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvd  111 (323)
T KOG2977|consen   33 PRPALENE-ETEITLDDPGSIKSRTLPNIRDSPEKMYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVD  111 (323)
T ss_pred             CCcccccc-ceEEEEcCCCCccceeCcccccChhhceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeC
Confidence            44444443 44455556555444444544443 33479999999999999999999999999885544566899999999


Q ss_pred             CCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCcc
Q psy7267         135 DGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYI  214 (569)
Q Consensus       135 DgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~  214 (569)
                      |||+|+|.+++-++..++..++++|+...+|+|||+|...|+-+++|+++++.|||....-..++++.+.+.+.     .
T Consensus       112 dgs~d~T~~~a~k~s~K~~~d~irV~~l~~nrgKGgAvR~g~l~~rG~~ilfadAdGaTkf~d~ekLe~al~~~-----~  186 (323)
T KOG2977|consen  112 DGSTDSTVEVALKFSRKLGDDNIRVIKLKKNRGKGGAVRKGMLSSRGQKILFADADGATKFADLEKLEKALNDK-----A  186 (323)
T ss_pred             CCCchhHHHHHHHHHHHcCcceEEEeehhccCCCCcceehhhHhccCceEEEEcCCCCccCCCHHHHHHHHHhh-----c
Confidence            99999999999999978777899999999999999999999999999999999999987777788888888763     1


Q ss_pred             ccccCCCCCceEEEeeeeeccc-ccchhhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchh
Q psy7267         215 EDKNNAAGCNGVIVGSRAHLEA-LANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWA  293 (569)
Q Consensus       215 g~~~~~~~g~dvV~G~r~~~~~-~~~~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~  293 (569)
                      |   +. ..-++++|+|.+++. .....+++.|++++.+++.+.+....+.+.|++|||++|+|.+..++|+...-++|.
T Consensus       187 ~---p~-~r~~va~GsrahLe~~~a~a~rs~~r~iLM~gFH~lv~~~a~rsI~DTQcgfklftR~aa~~if~~lh~e~W~  262 (323)
T KOG2977|consen  187 G---PG-PRDDVACGSRAHLENTEAVAKRSVIRNILMYGFHKLVWIFAIRSIRDTQCGFKLFTRAAARRIFPWLHVERWA  262 (323)
T ss_pred             C---CC-CCCceeecCHHHhhccHHHHHHhHhhHHHHHHHHHHHHHHhcCcccccchhHHHhHHHHHHhhcchhheeeee
Confidence            2   11 233699999999877 788899999999999999999999999999999999999999999999888899999


Q ss_pred             hchHHHHHHHHcCCCEEEEEEEEEEecCCccchhHHHHHHHHHHHHHHHHhcchhhHH
Q psy7267         294 FDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKI  351 (569)
Q Consensus       294 ~D~EL~~Ra~~~G~rI~~vPv~~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~i  351 (569)
                      +|.|+.+.+.+.+..+.++|+.|++-+||++.+++++++|.+++..++.+|..|.|++
T Consensus       263 fdvEll~La~~~~ipi~ei~v~w~EIdgSKi~~~~s~~~m~~dlv~i~v~y~~g~w~~  320 (323)
T KOG2977|consen  263 FDVELLYLAKRFTIPIKEIPVEWTEIDGSKITPVWSWLQMGSDLVLIRVRYLTGIWKR  320 (323)
T ss_pred             ccHHHHHHHHHcCCCcEEeeeEEEEcCCceeehHHHHHHHhhhhheEeeehhcceEEe
Confidence            9999999999999999999999999999999999999999999999999999999864

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=100.00  E-value=3.9e-31  Score=264.58  Aligned_cols=228  Identities=25%  Similarity=0.308  Sum_probs=183.5

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      ..|+||||||+|||++.|+.+++++.+++.    .++  ++||+||||||+|+|.++++++.++++..+++++.+++|.|
T Consensus         7 ~~~~vsVvIp~yne~~~l~~~l~~l~~~~~----~~~--~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G   80 (243)
T PLN02726          7 GAMKYSIIVPTYNERLNIALIVYLIFKALQ----DVK--DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLG   80 (243)
T ss_pred             CCceEEEEEccCCchhhHHHHHHHHHHHhc----cCC--CeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCC
Confidence            457899999999999999999988877643    222  78999999999999999999998877556788888899999


Q ss_pred             hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHH
Q psy7267         168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRN  247 (569)
Q Consensus       168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~  247 (569)
                      ++.|+|.|+++|+|||++++|+|+.++|++++++++.+.+              ++.++|.|.+.... +....+.+.+.
T Consensus        81 ~~~a~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~--------------~~~~~v~g~r~~~~-~~~~~~~~~r~  145 (243)
T PLN02726         81 LGTAYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRE--------------TGADIVTGTRYVKG-GGVHGWDLRRK  145 (243)
T ss_pred             HHHHHHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHHHh--------------cCCcEEEEccccCC-CCcCCccHHHH
Confidence            9999999999999999999999999999999999999876              46799999876432 22223344455


Q ss_pred             HhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEec-C-Cccc
Q psy7267         248 ILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIE-G-SKIV  325 (569)
Q Consensus       248 ~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~-G-S~~~  325 (569)
                      +.......+.....+.++.+.+|++++|||++++++.......+|.+|+||++++.+.|+++.++|+.+.++. | |+. 
T Consensus       146 ~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~s~~-  224 (243)
T PLN02726        146 LTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGESKL-  224 (243)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHHHHhhccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCCCCcccC-
Confidence            5555555565666667888999999999999999994334446788899999999999999999999999887 4 553 


Q ss_pred             hhHHHHHHHHHH
Q psy7267         326 PVFSWIQMGWDV  337 (569)
Q Consensus       326 ~~~~~~~~~~~~  337 (569)
                      .....+++...+
T Consensus       225 ~~~~~~~~~~~~  236 (243)
T PLN02726        225 GGSEIVQYLKGL  236 (243)
T ss_pred             CHHHHHHHHHHH
Confidence            334444444433

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=99.97  E-value=2.6e-30  Score=252.07  Aligned_cols=211  Identities=55%  Similarity=0.898  Sum_probs=179.7

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+|||++.|+++|+++.+++.++    +...+|||||||||+|+|.++++++.++++ ..++++++++|.|++.|+|
T Consensus         1 iiip~yN~~~~l~~~l~~l~~~~~~~----~~~~~eiivvdd~S~D~t~~~~~~~~~~~~-~~i~~i~~~~n~G~~~a~~   75 (211)
T cd04188           1 VVIPAYNEEKRLPPTLEEAVEYLEER----PSFSYEIIVVDDGSKDGTAEVARKLARKNP-ALIRVLTLPKNRGKGGAVR   75 (211)
T ss_pred             CEEcccChHHHHHHHHHHHHHHHhcc----CCCCEEEEEEeCCCCCchHHHHHHHHHhCC-CcEEEEEcccCCCcHHHHH
Confidence            69999999999999999999986642    233789999999999999999999988774 2368899899999999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGF  253 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~  253 (569)
                      .|++.|++|||+++|+|+.++|++++++++.+.+              ++.+++.|.+.....+........+.+.....
T Consensus        76 ~g~~~a~gd~i~~ld~D~~~~~~~l~~l~~~~~~--------------~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~  141 (211)
T cd04188          76 AGMLAARGDYILFADADLATPFEELEKLEEALKT--------------SGYDIAIGSRAHLASAAVVKRSWLRNLLGRGF  141 (211)
T ss_pred             HHHHHhcCCEEEEEeCCCCCCHHHHHHHHHHHhc--------------cCCcEEEEEeeccCCcccccccHHHHHHHHHH
Confidence            9999999999999999999999999999999765              45689999887543332234556667777766


Q ss_pred             hhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEecCCc
Q psy7267         254 HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSK  323 (569)
Q Consensus       254 ~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~GS~  323 (569)
                      ..+.+...+..+.+.++|+++|+|++++++++....+.|.+|+||+.|+.++|+++.++|+.|++++||+
T Consensus       142 ~~~~~~~~~~~~~d~~~g~~~~~r~~~~~~~~~~~~~~~~~d~el~~r~~~~g~~~~~vpi~~~~~~~~~  211 (211)
T cd04188         142 NFLVRLLLGLGIKDTQCGFKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVPVRWVEIPGSK  211 (211)
T ss_pred             HHHHHHHcCCCCcccccCceeEcHHHHHHHHhhhhccceEeeHHHHHHHHHcCCeEEEcCcceecCCCCC
Confidence            6666777777888999999999999999986555567888999999999999999999999999999864

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>KOG2978|consensus

Probab=99.97  E-value=7.8e-30  Score=239.72  Aligned_cols=227  Identities=26%  Similarity=0.342  Sum_probs=198.9

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      .++.||++|+|||.++|+-++.-+...+.+..     .++|||+|||+|.|+|.++++++++.+++++|.+..+....|.
T Consensus         2 ~~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~-----~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~klGL   76 (238)
T KOG2978|consen    2 SIKYSVILPTYNEKENLPIITRLIAKYMSEEG-----KKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKLGL   76 (238)
T ss_pred             CcceeEEeccccCCCCCeeeHHHHHhhhhhhc-----CceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcccc
Confidence            35689999999999999966665555544332     3899999999999999999999999998899999998889999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHH
Q psy7267         169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNI  248 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~  248 (569)
                      +.|.-.|+++|+|||+++||||.+++|.+++++++...+              ..+|+|.|.|+. .++++..|...|++
T Consensus        77 gtAy~hgl~~a~g~fiviMDaDlsHhPk~ipe~i~lq~~--------------~~~div~GTRYa-~~ggV~gW~mkRk~  141 (238)
T KOG2978|consen   77 GTAYIHGLKHATGDFIVIMDADLSHHPKFIPEFIRLQKE--------------GNYDIVLGTRYA-GGGGVYGWDMKRKI  141 (238)
T ss_pred             hHHHHhhhhhccCCeEEEEeCccCCCchhHHHHHHHhhc--------------cCcceeeeeeEc-CCCceecchhhHHH
Confidence            999999999999999999999999999999999998877              467999999974 56777889999999


Q ss_pred             hhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEec-C-Cccch
Q psy7267         249 LMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIE-G-SKIVP  326 (569)
Q Consensus       249 ~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~-G-S~~~~  326 (569)
                      .+++.+++.+.+.+.+..|.++.|+++++++++.......+.+|.+.+||..|+++.||.|.++|+++.+|. | |+.. 
T Consensus       142 IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~~li~e~vSkGyvfqmEll~ra~~~~y~IgEvPitFvdR~~GeSKLg-  220 (238)
T KOG2978|consen  142 ISRGANFLARILLNPGVSDLTGSFRLYKKEVLEKLIEESVSKGYVFQMELLARARQHGYTIGEVPITFVDRTYGESKLG-  220 (238)
T ss_pred             HhhhhHHHHHHhccCCCccCcceeeeehHHHHHhhHHHhhccchhhhHHHHHhccccCceEeecceEEEeecccccccc-
Confidence            999999999999999999999999999999999986667778999999999999999999999999999987 6 7753 


Q ss_pred             hHHHHHHHHH
Q psy7267         327 VFSWIQMGWD  336 (569)
Q Consensus       327 ~~~~~~~~~~  336 (569)
                      .....++.+.
T Consensus       221 ~~eIv~ylk~  230 (238)
T KOG2978|consen  221 GKEIVQYLKG  230 (238)
T ss_pred             HHHHHHHHHH
Confidence            2333444333

>PRK11204 N-glycosyltransferase; Provisional

Probab=99.97  E-value=2.1e-28  Score=263.76  Aligned_cols=232  Identities=15%  Similarity=0.200  Sum_probs=174.2

Q ss_pred             CCCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC
Q psy7267          86 DEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN  165 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n  165 (569)
                      ....|+|||+||+|||++.|+++++++.+|      +||  ++||+||||||+|+|.+.++++.+++  +++++++.++|
T Consensus        50 ~~~~p~vsViIp~yne~~~i~~~l~sl~~q------~yp--~~eiiVvdD~s~d~t~~~l~~~~~~~--~~v~~i~~~~n  119 (420)
T PRK11204         50 LKEYPGVSILVPCYNEGENVEETISHLLAL------RYP--NYEVIAINDGSSDNTGEILDRLAAQI--PRLRVIHLAEN  119 (420)
T ss_pred             cCCCCCEEEEEecCCCHHHHHHHHHHHHhC------CCC--CeEEEEEECCCCccHHHHHHHHHHhC--CcEEEEEcCCC
Confidence            345678999999999999999999999887      777  78999999999999999999998887  68999998999


Q ss_pred             CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHH
Q psy7267         166 RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFF  245 (569)
Q Consensus       166 ~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~  245 (569)
                      .||+.|+|.|++.+++|+++++|+|+.++||+++++++.++++             +++++|.|.....+..+...+...
T Consensus       120 ~Gka~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~-------------~~v~~v~g~~~~~~~~~~~~~~~~  186 (420)
T PRK11204        120 QGKANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHN-------------PRVGAVTGNPRIRNRSTLLGRIQV  186 (420)
T ss_pred             CCHHHHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhC-------------CCeEEEECCceeccchhHHHHHHH
Confidence            9999999999999999999999999999999999999999764             566777776544333222222111


Q ss_pred             HHHhhhh-hhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEE--EEEecCC
Q psy7267         246 RNILMKG-FHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVN--WTEIEGS  322 (569)
Q Consensus       246 r~~~~~~-~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~--~~~~~GS  322 (569)
                      ..+.... .........+ ......|.+.++||++++++ +++..+...+|.|++.|+.++|+++.++|..  +++.+.+
T Consensus       187 ~~~~~~~~~~~~~~~~~~-~~~~~~G~~~~~rr~~l~~v-gg~~~~~~~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~t  264 (420)
T PRK11204        187 GEFSSIIGLIKRAQRVYG-RVFTVSGVITAFRKSALHEV-GYWSTDMITEDIDISWKLQLRGWDIRYEPRALCWILMPET  264 (420)
T ss_pred             HHHHHhhhHHHHHHHHhC-CceEecceeeeeeHHHHHHh-CCCCCCcccchHHHHHHHHHcCCeEEeccccEEEeECccc
Confidence            1111100 0000011111 22233456679999999998 3333345678999999999999999999853  4444333


Q ss_pred             ccchhHHHHHHHHHHHHHHHHhcchhhHHHH
Q psy7267         323 KIVPVFSWIQMGWDVLNIWLHYTLGLWKIKA  353 (569)
Q Consensus       323 ~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~~  353 (569)
                      .           +.+.+|+.||..|.++...
T Consensus       265 ~-----------~~~~~Qr~RW~~G~~~~l~  284 (420)
T PRK11204        265 L-----------KGLWKQRLRWAQGGAEVLL  284 (420)
T ss_pred             H-----------HHHHHHHHHHhcCHHHHHH
Confidence            3           6678899999999876543

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=99.96  E-value=6.9e-28  Score=262.54  Aligned_cols=229  Identities=17%  Similarity=0.188  Sum_probs=173.8

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      ..|.|||+||+|||++.|+++++++++|      +||  ++||+||||||+|+|.++++++.+++  +++++++.++|.|
T Consensus        73 ~~p~vsViIP~yNE~~~i~~~l~sll~q------~yp--~~eIivVdDgs~D~t~~~~~~~~~~~--~~v~vv~~~~n~G  142 (444)
T PRK14583         73 GHPLVSILVPCFNEGLNARETIHAALAQ------TYT--NIEVIAINDGSSDDTAQVLDALLAED--PRLRVIHLAHNQG  142 (444)
T ss_pred             CCCcEEEEEEeCCCHHHHHHHHHHHHcC------CCC--CeEEEEEECCCCccHHHHHHHHHHhC--CCEEEEEeCCCCC
Confidence            4688999999999999999999999887      788  68999999999999999999998887  6899999889999


Q ss_pred             hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHH
Q psy7267         168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRN  247 (569)
Q Consensus       168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~  247 (569)
                      |+.|+|.|++.+++|+++++|||+.++||+++++++.+.++             ++.+++.|.....+..+...+.....
T Consensus       143 ka~AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~-------------~~~g~v~g~~~~~~~~~~~~~~~~~e  209 (444)
T PRK14583        143 KAIALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIAN-------------PRTGAVTGNPRIRTRSTLIGRVQVGE  209 (444)
T ss_pred             HHHHHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhC-------------CCeEEEEccceecCCCcchhhHHHHH
Confidence            99999999999999999999999999999999999999775             46677777654433333222211111


Q ss_pred             HhhhhhhhH--hhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEE--EEEecCCc
Q psy7267         248 ILMKGFHFI--VWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVN--WTEIEGSK  323 (569)
Q Consensus       248 ~~~~~~~~l--~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~--~~~~~GS~  323 (569)
                      +.. .....  .....+ .+....|++.++||++++++ +++..+...+|.|+..|+.++|+++.+.|..  +.+.+.+.
T Consensus       210 ~~~-~~~~~~~~~~~~g-~~~~~sG~~~~~rr~al~~v-Gg~~~~~i~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p~t~  286 (444)
T PRK14583        210 FSS-IIGLIKRTQRVYG-QVFTVSGVVAAFRRRALADV-GYWSPDMITEDIDISWKLQLKHWSVFFEPRGLCWILMPETL  286 (444)
T ss_pred             HHH-HHHHHHHHHHHhC-CceEecCceeEEEHHHHHHc-CCCCCCcccccHHHHHHHHHcCCeEEEeeccEEeeeCCCCH
Confidence            111 00000  001111 22223456679999999998 3344445778999999999999999999854  44433333


Q ss_pred             cchhHHHHHHHHHHHHHHHHhcchhhHHHH
Q psy7267         324 IVPVFSWIQMGWDVLNIWLHYTLGLWKIKA  353 (569)
Q Consensus       324 ~~~~~~~~~~~~~~l~~r~ry~~g~w~i~~  353 (569)
                                 +.+++||.||..|..+...
T Consensus       287 -----------~~~~~Qr~RW~~G~~~~~~  305 (444)
T PRK14583        287 -----------RGLWKQRLRWAQGGAEVFL  305 (444)
T ss_pred             -----------HHHHHHHHHHhCcHHHHHH
Confidence                       6778899999999866543

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=99.96  E-value=6.8e-28  Score=240.41  Aligned_cols=234  Identities=13%  Similarity=0.081  Sum_probs=161.8

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChH
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKG  169 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka  169 (569)
                      |.||||||+|||++.|.++|+|+++|      +||...+||+||||+|+|+|.++++++.... ..++.++.+..|.|++
T Consensus         1 p~vsIiIp~~Ne~~~l~~~l~sl~~~------~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~-~~~i~~~~~~~~~G~~   73 (241)
T cd06427           1 PVYTILVPLYKEAEVLPQLIASLSAL------DYPRSKLDVKLLLEEDDEETIAAARALRLPS-IFRVVVVPPSQPRTKP   73 (241)
T ss_pred             CeEEEEEecCCcHHHHHHHHHHHHhC------cCCcccEEEEEEECCCCchHHHHHHHhccCC-CeeEEEecCCCCCchH
Confidence            56999999999999999999999887      7887679999999999999999999875321 1356666666788999


Q ss_pred             HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccc-ccchhhHHHHHH
Q psy7267         170 GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEA-LANVQRSFFRNI  248 (569)
Q Consensus       170 ~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~-~~~~~~~~~r~~  248 (569)
                      .|+|.|+++++||||+++|+|+.++|+++.++++.+.+.+            +++.++.+.....+. .....+.....+
T Consensus        74 ~a~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~  141 (241)
T cd06427          74 KACNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLD------------DKLACVQAPLNYYNARENWLTRMFALEY  141 (241)
T ss_pred             HHHHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcC------------CCEEEEeCceEeeCCCccHHHHHHHHHH
Confidence            9999999999999999999999999999999999997531            233344433222211 111111110000


Q ss_pred             hhhhhhhHhhhccccccc-ccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEecCCccchh
Q psy7267         249 LMKGFHFIVWFTGVRTIR-DTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPV  327 (569)
Q Consensus       249 ~~~~~~~l~~~~~~~~i~-d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~GS~~~~~  327 (569)
                       ...+..........+.. ...+++.++||++++++ +++....+.+|.|++.|+.+.|+++.++|........+.    
T Consensus       142 -~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v-gg~~~~~~~eD~~l~~rl~~~G~r~~~~~~~~~~~~~~~----  215 (241)
T cd06427         142 -AAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLREL-GGWDPFNVTEDADLGLRLARAGYRTGVLNSTTLEEANNA----  215 (241)
T ss_pred             -HHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHHc-CCCCcccchhhHHHHHHHHHCCceEEEecccccccCcHh----
Confidence             00011000101111111 12334468999999998 233333567899999999999999999975332222222    


Q ss_pred             HHHHHHHHHHHHHHHHhcchhhHHHHH
Q psy7267         328 FSWIQMGWDVLNIWLHYTLGLWKIKAM  354 (569)
Q Consensus       328 ~~~~~~~~~~l~~r~ry~~g~w~i~~~  354 (569)
                            .+.+++++.||..|.+++...
T Consensus       216 ------~~~~~~q~~Rw~~g~~~~~~~  236 (241)
T cd06427         216 ------LGNWIRQRSRWIKGYMQTWLV  236 (241)
T ss_pred             ------HHHHHHHHHHHhccHHHHHHH
Confidence                  367888999999999887643

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=99.96  E-value=1.1e-27  Score=233.78  Aligned_cols=218  Identities=26%  Similarity=0.385  Sum_probs=171.2

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+||+++.|+++|+++.+|..       ...+|||||||||+|+|.++++++.+++  +.++++.+++|.|++.|+|
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q~~-------~~~~eiiiVDd~S~d~t~~~~~~~~~~~--~~i~~~~~~~n~G~~~a~n   71 (224)
T cd06442           1 IIIPTYNERENIPELIERLDAALK-------GIDYEIIVVDDNSPDGTAEIVRELAKEY--PRVRLIVRPGKRGLGSAYI   71 (224)
T ss_pred             CeEeccchhhhHHHHHHHHHHhhc-------CCCeEEEEEeCCCCCChHHHHHHHHHhC--CceEEEecCCCCChHHHHH
Confidence            699999999999999999999843       1278999999999999999999998877  6788998899999999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGF  253 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~  253 (569)
                      .|++.|++|+|+++|+|+.++|++++.+++.+.+              ++.++|.|.+.... .....+...+.......
T Consensus        72 ~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~--------------~~~~~v~g~~~~~~-~~~~~~~~~~~~~~~~~  136 (224)
T cd06442          72 EGFKAARGDVIVVMDADLSHPPEYIPELLEAQLE--------------GGADLVIGSRYVEG-GGVEGWGLKRKLISRGA  136 (224)
T ss_pred             HHHHHcCCCEEEEEECCCCCCHHHHHHHHHHHhc--------------CCCCEEEEeeeecC-CccCCCcHHHHHHHHHH
Confidence            9999999999999999999999999999999765              34578888775432 22233344444444444


Q ss_pred             hhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEec-CCccchhHHHHH
Q psy7267         254 HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIE-GSKIVPVFSWIQ  332 (569)
Q Consensus       254 ~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~-GS~~~~~~~~~~  332 (569)
                      ....+.....+..+.++++++++|++++++......+++.+|.|++.|+.+.|+++.++|..+..+. |+.....+..++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~s~~~~~~~~~  216 (224)
T cd06442         137 NLLARLLLGRKVSDPTSGFRAYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGESKLGGKEIVE  216 (224)
T ss_pred             HHHHHHHcCCCCCCCCCccchhhHHHHHHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCcCceeHHHHHH
Confidence            4444444455677888899999999999993234456788899999999999999999999887766 433234444444


Q ss_pred             HHH
Q psy7267         333 MGW  335 (569)
Q Consensus       333 ~~~  335 (569)
                      +.+
T Consensus       217 ~~~  219 (224)
T cd06442         217 YLK  219 (224)
T ss_pred             HHH
Confidence            433

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=99.96  E-value=5.6e-27  Score=255.16  Aligned_cols=232  Identities=15%  Similarity=0.184  Sum_probs=169.0

Q ss_pred             CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCC
Q psy7267          87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNR  166 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~  166 (569)
                      ...|+||||||+|||++.|+++|+++.+|      +||.+.+||+||||||+|+|.++++++++++  ++++++..++|.
T Consensus        46 ~~~P~vsVIIP~yNe~~~l~~~l~sl~~q------~yp~~~~eIiVVDd~StD~T~~il~~~~~~~--~~v~v~~~~~~~  117 (439)
T TIGR03111        46 GKLPDITIIIPVYNSEDTLFNCIESIYNQ------TYPIELIDIILANNQSTDDSFQVFCRAQNEF--PGLSLRYMNSDQ  117 (439)
T ss_pred             CCCCCEEEEEEeCCChHHHHHHHHHHHhc------CCCCCCeEEEEEECCCChhHHHHHHHHHHhC--CCeEEEEeCCCC
Confidence            44688999999999999999999999988      8998889999999999999999999988887  677777777889


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchh-h---
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQ-R---  242 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~-~---  242 (569)
                      ||+.|+|.|++.+++|+|+++|+|+.++||+++++++.++++             ++++++.|..... .+.... .   
T Consensus       118 Gka~AlN~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~-------------~~v~~v~g~~~~~-~~~~~~~~~~~  183 (439)
T TIGR03111       118 GKAKALNAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENN-------------PDIHAMTGVILTD-KELIEKTKGRF  183 (439)
T ss_pred             CHHHHHHHHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhC-------------CCeEEEEeEEecC-chhhhhhcchh
Confidence            999999999999999999999999999999999999999864             4556666655321 111100 0   


Q ss_pred             -HHHHH--HhhhhhhhHh-hh--cccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHH-cCCCEEEEEEE
Q psy7267         243 -SFFRN--ILMKGFHFIV-WF--TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEV-LHIPMAEVSVN  315 (569)
Q Consensus       243 -~~~r~--~~~~~~~~l~-~~--~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~-~G~rI~~vPv~  315 (569)
                       ...+.  +.......+. +.  .....+....|++.++||++++++ +++..+...+|+|+..|++. .|+++.++|..
T Consensus       184 ~~~~~~~~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~v-ggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~a  262 (439)
T TIGR03111       184 LKLIRRCEYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKT-QLYNSETVGEDTDMTFQIRELLDGKVYLCENA  262 (439)
T ss_pred             hhHhHHhHHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHh-CCCCCCCcCccHHHHHHHHHhcCCeEEECCCC
Confidence             01110  0000000000 00  001122334456779999999998 34444567899999999964 68999988744


Q ss_pred             --EEEecCCccchhHHHHHHHHHHHHHHHHhcchhhHHH
Q psy7267         316 --WTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK  352 (569)
Q Consensus       316 --~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~  352 (569)
                        +++.+.+.           +.+++||.||.+|..+..
T Consensus       263 ~~~~~~p~t~-----------~~~~~QR~RW~rG~~qv~  290 (439)
T TIGR03111       263 IFYVDPIDGL-----------NKLYTQRQRWQRGELEVS  290 (439)
T ss_pred             EEEEECCcCH-----------HHHHHHHHHHhccHHHHH
Confidence              44433333           567778888888865554

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=99.95  E-value=3.9e-27  Score=232.97  Aligned_cols=225  Identities=16%  Similarity=0.183  Sum_probs=158.2

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhC--CCeEEEEEcCCCCC
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG--EDIVRGLKLLKNRG  167 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~--~~~V~vi~~~~n~G  167 (569)
                      |+||||||+|||++.|.++|+++++|      +||.+.+||||||| |+|+|.++++++.++++  ..+++.+...+|.|
T Consensus         1 p~vSViIp~yNe~~~l~~~L~sl~~q------~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G   73 (232)
T cd06437           1 PMVTVQLPVFNEKYVVERLIEAACAL------DYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRTG   73 (232)
T ss_pred             CceEEEEecCCcHHHHHHHHHHHHhc------CCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCCC
Confidence            46999999999999999999999987      88887899999998 99999999998866542  24677777666667


Q ss_pred             -hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccc-ccchhhHHH
Q psy7267         168 -KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEA-LANVQRSFF  245 (569)
Q Consensus       168 -ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~-~~~~~~~~~  245 (569)
                       |+.|+|.|++.+++|||+++|+|+.++|++|+++...+.+              +++++|.+.....+. .++..+...
T Consensus        74 ~k~~a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~~--------------~~v~~v~~~~~~~~~~~~~~~~~~~  139 (232)
T cd06437          74 YKAGALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFAD--------------PKLGFVQTRWGHINANYSLLTRVQA  139 (232)
T ss_pred             CchHHHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhcC--------------CCeEEEecceeeEcCCCchhhHhhh
Confidence             7999999999999999999999999999999997776654              455666664432222 221111100


Q ss_pred             HHHhhhh-hhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEecC-Cc
Q psy7267         246 RNILMKG-FHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEG-SK  323 (569)
Q Consensus       246 r~~~~~~-~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~G-S~  323 (569)
                      ....... ........ ........++..+|||++++++ +++..+.+.+|+||+.|+..+|+++.++|.....+.. +.
T Consensus       140 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~rr~~~~~v-gg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~~  217 (232)
T cd06437         140 MSLDYHFTIEQVARSS-TGLFFNFNGTAGVWRKECIEDA-GGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPAS  217 (232)
T ss_pred             hhHHhhhhHhHhhHhh-cCCeEEeccchhhhhHHHHHHh-CCCCCCcchhhHHHHHHHHHCCCeEEEeccceeeeeCCcC
Confidence            0000000 00000111 1111122344558999999998 3344445678999999999999999999854444332 33


Q ss_pred             cchhHHHHHHHHHHHHHHHHhcch
Q psy7267         324 IVPVFSWIQMGWDVLNIWLHYTLG  347 (569)
Q Consensus       324 ~~~~~~~~~~~~~~l~~r~ry~~g  347 (569)
                      .          +.+..|++||..|
T Consensus       218 ~----------~~~~~q~~rW~~g  231 (232)
T cd06437         218 M----------SAYRSQQHRWSKG  231 (232)
T ss_pred             H----------HHHHHHHHHhccC
Confidence            2          6677888998776

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional

Probab=99.95  E-value=3e-26  Score=240.30  Aligned_cols=213  Identities=24%  Similarity=0.355  Sum_probs=168.8

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      .+++|||||+|||++.|+++++++.+.+.+..     .++||+||||||+|+|.++++++.++.+ .+++.+.+.+|.|+
T Consensus         5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~-----~~~EIIvVDDgS~D~T~~il~~~~~~~~-~~v~~i~~~~n~G~   78 (325)
T PRK10714          5 IKKVSVVIPVYNEQESLPELIRRTTAACESLG-----KEYEILLIDDGSSDNSAEMLVEAAQAPD-SHIVAILLNRNYGQ   78 (325)
T ss_pred             CCeEEEEEcccCchhhHHHHHHHHHHHHHhCC-----CCEEEEEEeCCCCCcHHHHHHHHHhhcC-CcEEEEEeCCCCCH
Confidence            45699999999999999999999987654321     2689999999999999999998865532 56777777889999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHH
Q psy7267         169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNI  248 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~  248 (569)
                      +.|+|.|+++|+||+++++|+|++.+|++++++++.+++               ++|+|.|.+...      ..+..+++
T Consensus        79 ~~A~~~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~~~---------------~~DvV~~~r~~~------~~~~~r~~  137 (325)
T PRK10714         79 HSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE---------------GYDVVGTVRQNR------QDSWFRKT  137 (325)
T ss_pred             HHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHh---------------hCCEEEEEEcCC------CCcHHHHH
Confidence            999999999999999999999999999999999999864               458887766421      12456777


Q ss_pred             hhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEec-C-Cccch
Q psy7267         249 LMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIE-G-SKIVP  326 (569)
Q Consensus       249 ~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~-G-S~~~~  326 (569)
                      .++.++.+.+...+..+.|.+|+|++++|++++++..  ..+...+   +...+...|+++.++|+.+.++. | |+.. 
T Consensus       138 ~s~~~~~l~~~~~g~~~~d~~~gfr~~~r~~~~~l~~--~~~~~~~---~~~l~~~~g~~i~evpv~~~~R~~G~Sk~~-  211 (325)
T PRK10714        138 ASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLH--CHERSTF---IPILANTFARRAIEIPVHHAEREFGDSKYS-  211 (325)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCcCeEEEcHHHHHHHHH--CCCCccH---HHHHHHHcCCCEEEEEeEecCccCCcCCCC-
Confidence            7777777777888889999999999999999999831  1222222   34556778999999999999887 6 6643 


Q ss_pred             hHHHHHHH
Q psy7267         327 VFSWIQMG  334 (569)
Q Consensus       327 ~~~~~~~~  334 (569)
                      +++.++..
T Consensus       212 ~~~~~~~~  219 (325)
T PRK10714        212 FMRLINLM  219 (325)
T ss_pred             HHHHHHHH
Confidence            34444433

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=99.95  E-value=2e-26  Score=222.75  Aligned_cols=187  Identities=18%  Similarity=0.091  Sum_probs=151.3

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC--
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG--  167 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G--  167 (569)
                      |+||||||+|||++.|.++|+++++|      +||  ++|||||||+|+|+|.++++++.++++..+++++...++.|  
T Consensus         1 p~vsviip~~n~~~~l~~~L~sl~~q------~~~--~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~   72 (196)
T cd02520           1 PGVSILKPLCGVDPNLYENLESFFQQ------DYP--KYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGIN   72 (196)
T ss_pred             CCeEEEEecCCCCccHHHHHHHHHhc------cCC--CeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCC
Confidence            46999999999999999999999987      666  58999999999999999999998887544677777666644  


Q ss_pred             -hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHH
Q psy7267         168 -KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR  246 (569)
Q Consensus       168 -ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r  246 (569)
                       ++.++|.|++.+++|+++++|+|+.++|++|+++++.+.+              +++++|.|.                
T Consensus        73 ~~~~~~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~~~--------------~~~~~v~~~----------------  122 (196)
T cd02520          73 PKVNNLIKGYEEARYDILVISDSDISVPPDYLRRMVAPLMD--------------PGVGLVTCL----------------  122 (196)
T ss_pred             HhHHHHHHHHHhCCCCEEEEECCCceEChhHHHHHHHHhhC--------------CCCCeEEee----------------
Confidence             5678999999999999999999999999999999999865              456777764                


Q ss_pred             HHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC---chhhchHHHHHHHHcCCCEEEEEEEEEEecC-C
Q psy7267         247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RWAFDVELLFIAEVLHIPMAEVSVNWTEIEG-S  322 (569)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~G-S  322 (569)
                                          ...++..++||++++++  +.+.+   ...+|++|+.|+.++|+++.++|....++.+ .
T Consensus       123 --------------------~~~g~~~~~r~~~~~~~--ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~~~  180 (196)
T cd02520         123 --------------------CAFGKSMALRREVLDAI--GGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLGST  180 (196)
T ss_pred             --------------------cccCceeeeEHHHHHhc--cChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCCcc
Confidence                                12235679999999998  33322   2457999999999999999999876655554 2


Q ss_pred             ccchhHHHHHHHHHHHHHHHHhcc
Q psy7267         323 KIVPVFSWIQMGWDVLNIWLHYTL  346 (569)
Q Consensus       323 ~~~~~~~~~~~~~~~l~~r~ry~~  346 (569)
                      +          ++.+++++.||..
T Consensus       181 ~----------~~~~~~q~~rw~~  194 (196)
T cd02520         181 S----------LASFWRRQLRWSR  194 (196)
T ss_pred             c----------HHHHHHHHHHHhc
Confidence            2          1566677777754

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=99.94  E-value=8.6e-26  Score=240.81  Aligned_cols=205  Identities=15%  Similarity=0.035  Sum_probs=150.7

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      ..|+||||||+|||++.|+++|+|+.+|      +||  ++||+|+||+|+|.|.++++++++++|+.+++++..+++.|
T Consensus        39 ~~p~VSViiP~~nee~~l~~~L~Sl~~q------~Yp--~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G  110 (373)
T TIGR03472        39 AWPPVSVLKPLHGDEPELYENLASFCRQ------DYP--GFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHG  110 (373)
T ss_pred             CCCCeEEEEECCCCChhHHHHHHHHHhc------CCC--CeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCC
Confidence            3678999999999999999999999998      888  59999999999999999999999888666788887666655


Q ss_pred             ---hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHH
Q psy7267         168 ---KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSF  244 (569)
Q Consensus       168 ---ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~  244 (569)
                         |..+++.++++|++|+++++|+|+.++|++|+++++.+++              +++++|.+.......++...+..
T Consensus       111 ~~~K~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~--------------~~v~~V~~~~~~~~~~~~~~~l~  176 (373)
T TIGR03472       111 PNRKVSNLINMLPHARHDILVIADSDISVGPDYLRQVVAPLAD--------------PDVGLVTCLYRGRPVPGFWSRLG  176 (373)
T ss_pred             CChHHHHHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHhcC--------------CCcceEeccccCCCCCCHHHHHH
Confidence               7788888999999999999999999999999999999975              46677777543222222211111


Q ss_pred             HHHHhhhhh-hhHhhhcccccccccccceeeEeHHHHHHHhccccC---CchhhchHHHHHHHHcCCCEEEEEEEEE
Q psy7267         245 FRNILMKGF-HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHV---QRWAFDVELLFIAEVLHIPMAEVSVNWT  317 (569)
Q Consensus       245 ~r~~~~~~~-~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~---e~~~~D~EL~~Ra~~~G~rI~~vPv~~~  317 (569)
                      ......... ........+ ......|.+.++||++++++  +.++   ....+|.+|..++.++|+++...|....
T Consensus       177 ~~~~~~~~~~~~~~~~~~~-~~~~~~G~~~a~RR~~l~~i--GGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~v~  250 (373)
T TIGR03472       177 AMGINHNFLPSVMVARALG-RARFCFGATMALRRATLEAI--GGLAALAHHLADDYWLGELVRALGLRVVLAPVVVD  250 (373)
T ss_pred             HHHhhhhhhHHHHHHHhcc-CCccccChhhheeHHHHHHc--CChHHhcccchHHHHHHHHHHHcCCeEEecchhhh
Confidence            100000010 000111111 11223456679999999999  3332   3456899999999999999998875433

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=99.94  E-value=1.8e-25  Score=219.45  Aligned_cols=226  Identities=12%  Similarity=0.049  Sum_probs=159.1

Q ss_pred             ccEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC-
Q psy7267          90 VNLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG-  167 (569)
Q Consensus        90 p~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G-  167 (569)
                      |+||||||+|||+ +.++++|+|+++|      +||...+||+||||||+|+|.++++++..++   +++++..+.|.| 
T Consensus         1 p~vsviip~~n~~~~~l~~~l~sl~~q------~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~---~~~~~~~~~~~~~   71 (234)
T cd06421           1 PTVDVFIPTYNEPLEIVRKTLRAALAI------DYPHDKLRVYVLDDGRRPELRALAAELGVEY---GYRYLTRPDNRHA   71 (234)
T ss_pred             CceEEEEecCCCcHHHHHHHHHHHHhc------CCCcccEEEEEEcCCCchhHHHHHHHhhccc---CceEEEeCCCCCC
Confidence            4699999999987 5789999999987      7776569999999999999999999987653   456666666655 


Q ss_pred             hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccc--hhhHHH
Q psy7267         168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALAN--VQRSFF  245 (569)
Q Consensus       168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~--~~~~~~  245 (569)
                      +++++|.|++++++|||+++|+|+.++|++++++++.+.++             ++.+++.|..........  ......
T Consensus        72 ~~~~~n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~~~  138 (234)
T cd06421          72 KAGNLNNALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDD-------------PKVALVQTPQFFYNPDPFDWLADGAP  138 (234)
T ss_pred             cHHHHHHHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcC-------------CCeEEEecceEEecCCcchhHHHHHH
Confidence            78899999999999999999999999999999999999874             455667665443322221  011110


Q ss_pred             HHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEecC-Ccc
Q psy7267         246 RNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEG-SKI  324 (569)
Q Consensus       246 r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~G-S~~  324 (569)
                      . ......................+++.++||++++++ ++.....+.+|++++.|+.++|+++.++|.....+.. .. 
T Consensus       139 ~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~i-g~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~~~~-  215 (234)
T cd06421         139 N-EQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDEI-GGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPET-  215 (234)
T ss_pred             H-HHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHHh-CCCCccceeccHHHHHHHHHcCceEEEecCccccccCCcc-
Confidence            0 000111111111111122233456789999999998 2333345678999999999999999999865443322 11 


Q ss_pred             chhHHHHHHHHHHHHHHHHhcchhh
Q psy7267         325 VPVFSWIQMGWDVLNIWLHYTLGLW  349 (569)
Q Consensus       325 ~~~~~~~~~~~~~l~~r~ry~~g~w  349 (569)
                               .+.+++++.||..|..
T Consensus       216 ---------~~~~~~q~~rw~~~~~  231 (234)
T cd06421         216 ---------LAAYIKQRLRWARGML  231 (234)
T ss_pred             ---------HHHHHHHHHHHhcCCe
Confidence                     1447778888877753

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional

Probab=99.93  E-value=2.8e-24  Score=246.99  Aligned_cols=228  Identities=14%  Similarity=0.092  Sum_probs=155.2

Q ss_pred             CCCCccEEEEEeecCCCC-ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          86 DEPSVNLSVIVPAYNEQD-RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~-~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ....|+|||+||+|||+. .+++++.+++++      |||.+++||+|+||||+|+|.+++++       .+++++..++
T Consensus       256 ~~~~P~VsViIPtYNE~~~vv~~tI~a~l~~------dYP~~k~EViVVDDgS~D~t~~la~~-------~~v~yI~R~~  322 (852)
T PRK11498        256 MSLWPTVDIFVPTYNEDLNVVKNTIYASLGI------DWPKDKLNIWILDDGGREEFRQFAQE-------VGVKYIARPT  322 (852)
T ss_pred             cCCCCcEEEEEecCCCcHHHHHHHHHHHHhc------cCCCCceEEEEEeCCCChHHHHHHHH-------CCcEEEEeCC
Confidence            345689999999999995 567788888877      99998999999999999999998877       3577887766


Q ss_pred             C-CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhh-
Q psy7267         165 N-RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQR-  242 (569)
Q Consensus       165 n-~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~-  242 (569)
                      | .||++|+|.|+++++||||+++|||+.++++++++++..+.++             ++.++|.+.....+.+..... 
T Consensus       323 n~~gKAGnLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~d-------------P~VglVQtp~~f~n~dp~~rnl  389 (852)
T PRK11498        323 HEHAKAGNINNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKD-------------KKLAMMQTPHHFFSPDPFERNL  389 (852)
T ss_pred             CCcchHHHHHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhC-------------CCeEEEEcceeccCCchHHHhh
Confidence            5 4699999999999999999999999999999999999988765             455666554322222211100 


Q ss_pred             HHHHHHhh---hhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEE--EEE
Q psy7267         243 SFFRNILM---KGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSV--NWT  317 (569)
Q Consensus       243 ~~~r~~~~---~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv--~~~  317 (569)
                      ...+....   .++..+.............|++.++||++++++ +++..+...+|.|++.|+.++||++.+++.  .+.
T Consensus       390 ~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeV-GGfd~~titED~dlslRL~~~Gyrv~yl~~~~a~g  468 (852)
T PRK11498        390 GRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEI-GGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAG  468 (852)
T ss_pred             HHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHHh-cCCCCCccCccHHHHHHHHHcCCEEEEEeccceeE
Confidence            00000000   001111100000011112345679999999999 344445577999999999999999999863  333


Q ss_pred             EecCCccchhHHHHHHHHHHHHHHHHhcchhhHH
Q psy7267         318 EIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKI  351 (569)
Q Consensus       318 ~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~i  351 (569)
                      ..+.+.           ....+|+.||..|..++
T Consensus       469 laPesl-----------~~~~~QR~RWarG~lQi  491 (852)
T PRK11498        469 LATESL-----------SAHIGQRIRWARGMVQI  491 (852)
T ss_pred             ECCCCH-----------HHHHHHHHHHHHHHHHH
Confidence            222333           44455666666655443

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=99.93  E-value=5.6e-25  Score=217.33  Aligned_cols=224  Identities=17%  Similarity=0.125  Sum_probs=154.5

Q ss_pred             EEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHH-HHHHHHhHhhCCCeEEEEEcCCCCC-hH
Q psy7267          93 SVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTM-QVVHQYTEKCGEDIVRGLKLLKNRG-KG  169 (569)
Q Consensus        93 SVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~-eil~~~~~~~~~~~V~vi~~~~n~G-ka  169 (569)
                      |||||+|||+ +.|+++|+++.+|      +||  ++||+||||+|+|+|. ++++++.++.+ .+++++...+|.| ++
T Consensus         1 siiip~~ne~~~~l~~~l~sl~~q------~~~--~~eiiVvdd~s~D~t~~~~i~~~~~~~~-~~i~~i~~~~~~G~~~   71 (236)
T cd06435           1 SIHVPCYEEPPEMVKETLDSLAAL------DYP--NFEVIVIDNNTKDEALWKPVEAHCAQLG-ERFRFFHVEPLPGAKA   71 (236)
T ss_pred             CeeEeeCCCcHHHHHHHHHHHHhC------CCC--CcEEEEEeCCCCchhHHHHHHHHHHHhC-CcEEEEEcCCCCCCch
Confidence            7999999998 6899999998876      666  6899999999999985 67777766543 5788888777777 69


Q ss_pred             HHHHHHHHhcc--CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccc-cchhhHHHH
Q psy7267         170 GAVTLGTKCAR--GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEAL-ANVQRSFFR  246 (569)
Q Consensus       170 ~AlN~Gl~~A~--gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~-~~~~~~~~r  246 (569)
                      .|+|.|++++.  +|||+++|+|+.++|++|.++++.+++              ++.++|.+........ ....+....
T Consensus        72 ~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~--------------~~~~~v~~~~~~~~~~~~~~~~~~~~  137 (236)
T cd06435          72 GALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDD--------------PRVGFVQAPQDYRDGEESLFKRMCYA  137 (236)
T ss_pred             HHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcC--------------CCeeEEecCccccCCCccHHHHHHhH
Confidence            99999999986  699999999999999999999999864              4556666533221111 111110000


Q ss_pred             HHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccC-CchhhchHHHHHHHHcCCCEEEEEEEEEEecC-Ccc
Q psy7267         247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHV-QRWAFDVELLFIAEVLHIPMAEVSVNWTEIEG-SKI  324 (569)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~-e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~G-S~~  324 (569)
                      .+.......... ..........+.+.++||++++++  +.++ ..+.+|.|++.|+.+.|+++.++|....+... +. 
T Consensus       138 ~~~~~~~~~~~~-~~~~~~~~~~g~~~~~rr~~~~~i--Ggf~~~~~~eD~dl~~r~~~~G~~~~~~~~~~~~~~~~~~-  213 (236)
T cd06435         138 EYKGFFDIGMVS-RNERNAIIQHGTMCLIRRSALDDV--GGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDT-  213 (236)
T ss_pred             HHHHHHHHHhcc-ccccCceEEecceEEEEHHHHHHh--CCCCCccccchHHHHHHHHHCCcEEEEcchhhccCcCccc-
Confidence            000000000000 000011122345679999999999  4333 34567999999999999999999854333221 22 


Q ss_pred             chhHHHHHHHHHHHHHHHHhcchhhHHH
Q psy7267         325 VPVFSWIQMGWDVLNIWLHYTLGLWKIK  352 (569)
Q Consensus       325 ~~~~~~~~~~~~~l~~r~ry~~g~w~i~  352 (569)
                               +..+.+++.||..|.++..
T Consensus       214 ---------~~~~~~q~~rw~~g~~~~~  232 (236)
T cd06435         214 ---------FEAFKKQRFRWAYGAVQIL  232 (236)
T ss_pred             ---------HHHHHHHHHHHhcchhhhh
Confidence                     2677788999999987654

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=99.93  E-value=2.6e-24  Score=246.89  Aligned_cols=234  Identities=15%  Similarity=0.107  Sum_probs=160.8

Q ss_pred             CCCCccEEEEEeecCCCCCh-HHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH--------------HHHHHHHhH
Q psy7267          86 DEPSVNLSVIVPAYNEQDRL-KPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT--------------MQVVHQYTE  150 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~~I-~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T--------------~eil~~~~~  150 (569)
                      ....|+|||+||+|||+..+ ++++++++++      +||.+++||+|+||||||+|              .+.++++.+
T Consensus       127 ~~~~P~VsViIP~yNE~~~iv~~tl~s~~~~------dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~  200 (713)
T TIGR03030       127 PEEWPTVDVFIPTYNEDLEIVATTVLAAKNM------DYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCR  200 (713)
T ss_pred             cccCCeeEEEEcCCCCCHHHHHHHHHHHHhC------CCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHH
Confidence            34568899999999999755 5788888777      89988999999999999998              345556655


Q ss_pred             hhCCCeEEEEEcCCCC-ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEe
Q psy7267         151 KCGEDIVRGLKLLKNR-GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVG  229 (569)
Q Consensus       151 ~~~~~~V~vi~~~~n~-Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G  229 (569)
                      +   .+++++..++|. +|++|+|.|+++++||+|+++|||+.++||+|++++..+.++             +++.+|.+
T Consensus       201 ~---~~v~yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~d-------------p~v~~Vqt  264 (713)
T TIGR03030       201 K---LGVNYITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVED-------------PKLFLVQT  264 (713)
T ss_pred             H---cCcEEEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhC-------------CCEEEEeC
Confidence            5   468888877775 599999999999999999999999999999999999999764             45555555


Q ss_pred             eeeecccccchhh-HHHHHHh---hhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHc
Q psy7267         230 SRAHLEALANVQR-SFFRNIL---MKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVL  305 (569)
Q Consensus       230 ~r~~~~~~~~~~~-~~~r~~~---~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~  305 (569)
                      .....+.+..... .......   ..++..+.......+.....|++.++||++++++ +++..+...+|++++.|+.++
T Consensus       265 p~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~i-GGf~~~~vtED~~l~~rL~~~  343 (713)
T TIGR03030       265 PHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEI-GGIAGETVTEDAETALKLHRR  343 (713)
T ss_pred             CeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHc-CCCCCCCcCcHHHHHHHHHHc
Confidence            4322222211100 0000000   0001111100000011112345578999999999 334445678899999999999


Q ss_pred             CCCEEEEEEEEEEecC-CccchhHHHHHHHHHHHHHHHHhcchhhHHH
Q psy7267         306 HIPMAEVSVNWTEIEG-SKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK  352 (569)
Q Consensus       306 G~rI~~vPv~~~~~~G-S~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~  352 (569)
                      ||++.++|........ ..          .+.+.+||.||..|..++.
T Consensus       344 G~~~~y~~~~~~~g~~p~s----------l~~~~~Qr~RWa~G~~qi~  381 (713)
T TIGR03030       344 GWNSAYLDRPLIAGLAPET----------LSGHIGQRIRWAQGMMQIF  381 (713)
T ss_pred             CCeEEEeccccccccCCCC----------HHHHHHHHHHHhcChHHHH
Confidence            9999998744332221 12          2667788888888876654

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=99.93  E-value=1.3e-24  Score=216.59  Aligned_cols=224  Identities=19%  Similarity=0.194  Sum_probs=162.5

Q ss_pred             CCCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC
Q psy7267          86 DEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN  165 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n  165 (569)
                      ....|++|||||+|||++.|.++|+++.+|      +||...+||+||||+|+|+|.++++++.++    +++++..++|
T Consensus        25 ~~~~~~isVvip~~n~~~~l~~~l~si~~q------~~~~~~~eiivvdd~s~d~t~~~~~~~~~~----~v~~i~~~~~   94 (251)
T cd06439          25 PAYLPTVTIIIPAYNEEAVIEAKLENLLAL------DYPRDRLEIIVVSDGSTDGTAEIAREYADK----GVKLLRFPER   94 (251)
T ss_pred             CCCCCEEEEEEecCCcHHHHHHHHHHHHhC------cCCCCcEEEEEEECCCCccHHHHHHHHhhC----cEEEEEcCCC
Confidence            455778999999999999999999999887      677656999999999999999999987543    5888888899


Q ss_pred             CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccc-hhhHH
Q psy7267         166 RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALAN-VQRSF  244 (569)
Q Consensus       166 ~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~-~~~~~  244 (569)
                      .|++.|+|.|++++++|||+++|+|+.++|++++++++.+++              ++.++++|......+.+. .....
T Consensus        95 ~g~~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~--------------~~~~~v~~~~~~~~~~~~~~~~~~  160 (251)
T cd06439          95 RGKAAALNRALALATGEIVVFTDANALLDPDALRLLVRHFAD--------------PSVGAVSGELVIVDGGGSGSGEGL  160 (251)
T ss_pred             CChHHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhcC--------------CCccEEEeEEEecCCcccchhHHH
Confidence            999999999999999999999999999999999999999975              456778876654433220 11111


Q ss_pred             HHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEEEEEecC-Cc
Q psy7267         245 FRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEG-SK  323 (569)
Q Consensus       245 ~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~G-S~  323 (569)
                      ...+....... . .... ......+++.+++|++++.    .......+|.++..++.+.|+++.++|.....+.. ..
T Consensus       161 ~~~~~~~~~~~-~-~~~~-~~~~~~g~~~~~rr~~~~~----~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~  233 (251)
T cd06439         161 YWKYENWLKRA-E-SRLG-STVGANGAIYAIRRELFRP----LPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAED  233 (251)
T ss_pred             HHHHHHHHHHH-H-HhcC-CeeeecchHHHhHHHHhcC----CCcccchhHHHHHHHHHHcCCeEEeccccEEEEeCccc
Confidence            11111111110 0 0111 1233445566889988873    23345567999999999999999999855444432 22


Q ss_pred             cchhHHHHHHHHHHHHHHHHhcchhhH
Q psy7267         324 IVPVFSWIQMGWDVLNIWLHYTLGLWK  350 (569)
Q Consensus       324 ~~~~~~~~~~~~~~l~~r~ry~~g~w~  350 (569)
                      .          ...++++.||..|.|+
T Consensus       234 ~----------~~~~~~~~r~~~g~~~  250 (251)
T cd06439         234 G----------SEEFRRRVRIAAGNLQ  250 (251)
T ss_pred             H----------HHHHHHHHHHHhcccc
Confidence            1          3455667777777653

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=99.93  E-value=4.6e-24  Score=228.44  Aligned_cols=204  Identities=20%  Similarity=0.138  Sum_probs=147.1

Q ss_pred             CCCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCC-CeEEEEEcCC
Q psy7267          86 DEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGE-DIVRGLKLLK  164 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~-~~V~vi~~~~  164 (569)
                      ++..|+||||||+|||++.|+++|+++++|      +||. ++|||||||+|+|+|.++++++.+++|. +++++++.++
T Consensus        36 ~~~~p~VSVIIpa~Ne~~~L~~~L~sL~~q------~yp~-~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~  108 (384)
T TIGR03469        36 PEAWPAVVAVVPARNEADVIGECVTSLLEQ------DYPG-KLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQP  108 (384)
T ss_pred             CCCCCCEEEEEecCCcHhHHHHHHHHHHhC------CCCC-ceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCC
Confidence            345688999999999999999999999987      7875 5899999999999999999999877742 2788887432


Q ss_pred             ----CCChHHHHHHHHHhcc-----CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecc
Q psy7267         165 ----NRGKGGAVTLGTKCAR-----GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLE  235 (569)
Q Consensus       165 ----n~Gka~AlN~Gl~~A~-----gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~  235 (569)
                          +.||+.|+|.|+++|+     +|+++++|+|+.++|++++++++.+++.              +.+++.+......
T Consensus       109 ~~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~--------------~~~~vs~~~~~~~  174 (384)
T TIGR03469       109 LPPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAE--------------GLDLVSLMVRLRC  174 (384)
T ss_pred             CCCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhC--------------CCCEEEecccccC
Confidence                2589999999999999     9999999999999999999999999873              4566655432221


Q ss_pred             cccchhhHHHHHHhhhhhh--hHhhhcc-cccccccccceeeEeHHHHHHHhccccC---CchhhchHHHHHHHHcCCCE
Q psy7267         236 ALANVQRSFFRNILMKGFH--FIVWFTG-VRTIRDTQCGFKLFTRKSALQLFSSIHV---QRWAFDVELLFIAEVLHIPM  309 (569)
Q Consensus       236 ~~~~~~~~~~r~~~~~~~~--~l~~~~~-~~~i~d~~~gf~lfrR~al~~I~~~~~~---e~~~~D~EL~~Ra~~~G~rI  309 (569)
                       .+...+.....+......  ...+... ........+++.++||++++++  +.++   ....+|++++.|++++|+++
T Consensus       175 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~v--GGf~~~~~~~~ED~~L~~r~~~~G~~v  251 (384)
T TIGR03469       175 -ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALERI--GGIAAIRGALIDDCTLAAAVKRSGGRI  251 (384)
T ss_pred             -CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHHc--CCHHHHhhCcccHHHHHHHHHHcCCcE
Confidence             111111111111000000  0000000 1112224567889999999999  4333   23567999999999999998


Q ss_pred             EEEE
Q psy7267         310 AEVS  313 (569)
Q Consensus       310 ~~vP  313 (569)
                      ....
T Consensus       252 ~~~~  255 (384)
T TIGR03469       252 WLGL  255 (384)
T ss_pred             EEEe
Confidence            8764

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=99.93  E-value=1.2e-24  Score=224.45  Aligned_cols=216  Identities=19%  Similarity=0.079  Sum_probs=142.6

Q ss_pred             EEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHH
Q psy7267          93 SVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGA  171 (569)
Q Consensus        93 SVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~A  171 (569)
                      |||||+||++ +.|.++|+|++++      .++...+|||||||||+|+|.+++.+.......++++++++++|.|.+.|
T Consensus         1 SIIIp~~N~~~~~l~~~l~Sl~~~------~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a   74 (299)
T cd02510           1 SVIIIFHNEALSTLLRTVHSVINR------TPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRA   74 (299)
T ss_pred             CEEEEEecCcHHHHHHHHHHHHhc------CchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHH
Confidence            7999999999 9999999999987      44433579999999999999998876221111268999999999999999


Q ss_pred             HHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhh
Q psy7267         172 VTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMK  251 (569)
Q Consensus       172 lN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~  251 (569)
                      +|.|+++|+||||+++|+|+.++|++|+++++.+.+++.+.+.|........ ......... ...+...+.....+...
T Consensus        75 ~N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~  152 (299)
T cd02510          75 RIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDAD-TFEYRGSSG-DARGGFDWSLHFKWLPL  152 (299)
T ss_pred             HHHHHHHccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCC-CeeEecCCC-ceeEEecccceeccccC
Confidence            9999999999999999999999999999999999886432221111100000 000000000 00000000000000000


Q ss_pred             hhhh--HhhhcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcCCCEEEEEEEEEE
Q psy7267         252 GFHF--IVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLHIPMAEVSVNWTE  318 (569)
Q Consensus       252 ~~~~--l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G~rI~~vPv~~~~  318 (569)
                      ....  ..............+++.++||++++++  +.+++.+    .+|+||+.|+.++|+++.++|.....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~v--GgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~  223 (299)
T cd02510         153 PEEERRRESPTAPIRSPTMAGGLFAIDREWFLEL--GGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVG  223 (299)
T ss_pred             CHHHhhhcCCCCCccCccccceeeEEEHHHHHHh--CCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEE
Confidence            0000  0000011122334567889999999999  5565554    37999999999999999999954433

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=1.1e-23  Score=227.09  Aligned_cols=231  Identities=24%  Similarity=0.301  Sum_probs=170.3

Q ss_pred             CccEEEEEeecCCCC-ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEc-CCCC
Q psy7267          89 SVNLSVIVPAYNEQD-RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKL-LKNR  166 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~-~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~-~~n~  166 (569)
                      .|+++|+||+|||+. .++++++++.++      +||  ++||++|||+|+|+|.+++++..++++ ++++++.. .+|.
T Consensus        53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~------dyp--~~evivv~d~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~  123 (439)
T COG1215          53 LPKVSVIIPAYNEEPEVLEETLESLLSQ------DYP--RYEVIVVDDGSTDETYEILEELGAEYG-PNFRVIYPEKKNG  123 (439)
T ss_pred             CCceEEEEecCCCchhhHHHHHHHHHhC------CCC--CceEEEECCCCChhHHHHHHHHHhhcC-cceEEEeccccCc
Confidence            588999999999999 999999999998      888  589999999999999999999988873 36666643 5789


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccc---cchhhH
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEAL---ANVQRS  243 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~---~~~~~~  243 (569)
                      ||+.|+|.|++.+++|+|+++|||..++||+|.+++..+.+.+              ...++|........   +...+.
T Consensus       124 gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~--------------~~~v~~~~~~~~~~~~~~~l~~~  189 (439)
T COG1215         124 GKAGALNNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDPP--------------VGAVVGTPRIRNRPDPSNLLGRI  189 (439)
T ss_pred             cchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCCC--------------eeEEeCCceeeecCChhhhcchh
Confidence            9999999999999999999999999999999999999999842              22455544332221   111111


Q ss_pred             HHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEEE--EEEecC
Q psy7267         244 FFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVN--WTEIEG  321 (569)
Q Consensus       244 ~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~--~~~~~G  321 (569)
                      ..-..................+.-..|...++||++++++ +++..+...+|.+++.++...|+++.++|..  +.+.+.
T Consensus       190 ~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~-g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~~~~~~~p~  268 (439)
T COG1215         190 QAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEV-GGWLEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPE  268 (439)
T ss_pred             cchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHh-CCCCCCceeccHHHHHHHHHCCCeEEEeecceEeeeCcc
Confidence            1000000000000011111123444566789999999999 3456677789999999999999999999855  444433


Q ss_pred             CccchhHHHHHHHHHHHHHHHHhcchhhHHHHH
Q psy7267         322 SKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKAM  354 (569)
Q Consensus       322 S~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~~~  354 (569)
                      +.           ..+++||.||.+|.++....
T Consensus       269 t~-----------~~~~~Qr~RW~~g~~~~~~~  290 (439)
T COG1215         269 TL-----------KELWRQRLRWARGGLQVLLL  290 (439)
T ss_pred             cH-----------HHHHHHHHHHHcccceeeeh
Confidence            43           67888999999998765543

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=99.92  E-value=1.1e-23  Score=207.98  Aligned_cols=228  Identities=18%  Similarity=0.131  Sum_probs=161.7

Q ss_pred             cEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHH
Q psy7267          91 NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGG  170 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~  170 (569)
                      ++|||||+||+++.|.++|+++.+|      .||..++||+||||+|+|+|.+.++++.+++  +.++++.+ ++.|++.
T Consensus         1 ~~sIiip~~n~~~~l~~~l~sl~~q------~~~~~~~evivvd~~s~d~~~~~~~~~~~~~--~~v~~i~~-~~~~~~~   71 (249)
T cd02525           1 FVSIIIPVRNEEKYIEELLESLLNQ------SYPKDLIEIIVVDGGSTDGTREIVQEYAAKD--PRIRLIDN-PKRIQSA   71 (249)
T ss_pred             CEEEEEEcCCchhhHHHHHHHHHhc------cCCCCccEEEEEeCCCCccHHHHHHHHHhcC--CeEEEEeC-CCCCchH
Confidence            3899999999999999999999887      6665689999999999999999999988775  67888875 4678999


Q ss_pred             HHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhh
Q psy7267         171 AVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILM  250 (569)
Q Consensus       171 AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~  250 (569)
                      |+|.|++.+++|+++++|+|+.++|++++++++.+.+              ++.+++.|.......... ..........
T Consensus        72 a~N~g~~~a~~d~v~~lD~D~~~~~~~l~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~-~~~~~~~~~~  136 (249)
T cd02525          72 GLNIGIRNSRGDIIIRVDAHAVYPKDYILELVEALKR--------------TGADNVGGPMETIGESKF-QKAIAVAQSS  136 (249)
T ss_pred             HHHHHHHHhCCCEEEEECCCccCCHHHHHHHHHHHhc--------------CCCCEEecceecCCCChH-HHHHHHHhhc
Confidence            9999999999999999999999999999999998876              455777776643322211 1111111000


Q ss_pred             hhhh--hHhhhcccccccccccceeeEeHHHHHHHhccccCCch--hhchHHHHHHHHcCCCEEEEEEEEEEecC-Cccc
Q psy7267         251 KGFH--FIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW--AFDVELLFIAEVLHIPMAEVSVNWTEIEG-SKIV  325 (569)
Q Consensus       251 ~~~~--~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~--~~D~EL~~Ra~~~G~rI~~vPv~~~~~~G-S~~~  325 (569)
                      ....  ...............+++.+++|++++++  +..++.+  .+|.|++.|+.++|+++.++|.....+.. ++. 
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~s~-  213 (249)
T cd02525         137 PLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKV--GGFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTL-  213 (249)
T ss_pred             hhccCCccccccccccccccccccceEEHHHHHHh--CCCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcCCCCH-
Confidence            0000  00000000001123456679999999998  4444433  47999999999999999999855444332 221 


Q ss_pred             hhHHHHHHHHHHHHHHHHhcchhhHHHHH
Q psy7267         326 PVFSWIQMGWDVLNIWLHYTLGLWKIKAM  354 (569)
Q Consensus       326 ~~~~~~~~~~~~l~~r~ry~~g~w~i~~~  354 (569)
                               +..++++.||..+.++....
T Consensus       214 ---------~~~~~~~~r~~~~~~~~~~~  233 (249)
T cd02525         214 ---------KKLARQYFRYGKWRARTLRK  233 (249)
T ss_pred             ---------HHHHHHHHHHhhhhHHHHHh
Confidence                     34556777777776655443

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.92  E-value=1.4e-23  Score=204.72  Aligned_cols=221  Identities=19%  Similarity=0.136  Sum_probs=150.6

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC--CCCChHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL--KNRGKGGA  171 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~--~n~Gka~A  171 (569)
                      ||||+||+++.|+++|+++++|      +||.+.+||+||||||+|+|.++++ +....+.++++++..+  .|.|++.|
T Consensus         1 viip~~n~~~~l~~~l~sl~~q------~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~~~~~v~~~~~~~~~~~g~~~a   73 (229)
T cd04192           1 VVIAARNEAENLPRLLQSLSAL------DYPKEKFEVILVDDHSTDGTVQILE-FAAAKPNFQLKILNNSRVSISGKKNA   73 (229)
T ss_pred             CEEEecCcHHHHHHHHHHHHhC------CCCCCceEEEEEcCCCCcChHHHHH-HHHhCCCcceEEeeccCcccchhHHH
Confidence            6999999999999999999888      6776569999999999999999988 3334434678888766  47899999


Q ss_pred             HHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhh
Q psy7267         172 VTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMK  251 (569)
Q Consensus       172 lN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~  251 (569)
                      +|.|++++++|+|+++|+|+.++|++|+++++.+.++              +.+++.|.......++.............
T Consensus        74 ~n~g~~~~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  139 (229)
T cd04192          74 LTTAIKAAKGDWIVTTDADCVVPSNWLLTFVAFIQKE--------------QIGLVAGPVIYFKGKSLLAKFQRLDWLSL  139 (229)
T ss_pred             HHHHHHHhcCCEEEEECCCcccCHHHHHHHHHHhhcC--------------CCcEEeeeeeecCCccHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999988763              34556665433222222111110000000


Q ss_pred             hhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC---chhhchHHHHHHHHcCC-CEEEEE--EEEEEecCCccc
Q psy7267         252 GFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RWAFDVELLFIAEVLHI-PMAEVS--VNWTEIEGSKIV  325 (569)
Q Consensus       252 ~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~~~D~EL~~Ra~~~G~-rI~~vP--v~~~~~~GS~~~  325 (569)
                      ..........+... ...+++.+++|++++++  +.+++   ...+|.+++.|+.+.|+ ++.+++  ..+......   
T Consensus       140 ~~~~~~~~~~~~~~-~~~g~~~~~rr~~~~~~--ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---  213 (229)
T cd04192         140 LGLIAGSFGLGKPF-MCNGANMAYRKEAFFEV--GGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPV---  213 (229)
T ss_pred             HHHHhhHHHhcCcc-ccccceEEEEHHHHHHh--cCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCc---
Confidence            00000011111111 12345579999999999  44432   33469999999999999 887764  222222111   


Q ss_pred             hhHHHHHHHHHHHHHHHHhcch
Q psy7267         326 PVFSWIQMGWDVLNIWLHYTLG  347 (569)
Q Consensus       326 ~~~~~~~~~~~~l~~r~ry~~g  347 (569)
                            ..+..+++++.||..|
T Consensus       214 ------~~~~~~~~q~~Rw~~g  229 (229)
T cd04192         214 ------TSWKELLNQRKRWASK  229 (229)
T ss_pred             ------hhHHHHHHHHHHhhcC
Confidence                  1125677788888654

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=99.91  E-value=1.2e-24  Score=213.64  Aligned_cols=223  Identities=21%  Similarity=0.208  Sum_probs=137.9

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC--
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG--  167 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G--  167 (569)
                      |+|+||||+|||++.|.++|++++++      +||  ++||+||||+|+|+|.+.++++.++++..+++++..+.|.|  
T Consensus         1 P~v~Vvip~~~~~~~l~~~l~sl~~~------~~~--~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~   72 (228)
T PF13641_consen    1 PRVSVVIPAYNEDDVLRRCLESLLAQ------DYP--RLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPG   72 (228)
T ss_dssp             --EEEE--BSS-HHHHHHHHHHHTTS------HHH--TEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHH
T ss_pred             CEEEEEEEecCCHHHHHHHHHHHHcC------CCC--CeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcc
Confidence            56999999999999999999999987      343  79999999999999999999988888644678888776654  


Q ss_pred             -hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHH
Q psy7267         168 -KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR  246 (569)
Q Consensus       168 -ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r  246 (569)
                       |+.|+|.|++++++|+|+++|+|+.++|++|.++++.+++              +++++|.+.....+......... .
T Consensus        73 ~k~~a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~~~~~~-~  137 (228)
T PF13641_consen   73 GKARALNEALAAARGDYILFLDDDTVLDPDWLERLLAAFAD--------------PGVGAVGGPVFPDNDRNWLTRLQ-D  137 (228)
T ss_dssp             HHHHHHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHB--------------SS--EEEEEEEETTCCCEEEE-T-T
T ss_pred             hHHHHHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHh--------------CCCCeEeeeEeecCCCCHHHHHH-H
Confidence             8999999999999999999999999999999999999944              56777776664333222211110 0


Q ss_pred             HHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccC-CchhhchHHHHHHHHcCCCEEEEEEEEEEec-CCcc
Q psy7267         247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHV-QRWAFDVELLFIAEVLHIPMAEVSVNWTEIE-GSKI  324 (569)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~-e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~-GS~~  324 (569)
                      .................+.....|++.+|||++++++  +.++ ....+|.+++.|+.++|+++.+.|.....+. .+..
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~~--g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~~~~  215 (228)
T PF13641_consen  138 LFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEEV--GGFDPFILGEDFDLCLRLRAAGWRIVYAPDALVYHEEPSSL  215 (228)
T ss_dssp             --S-EETTTS-TT-B----S-B--TEEEEEHHHHHHH---S--SSSSSHHHHHHHHHHHTT--EEEEEEEEEEE--SSST
T ss_pred             HHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHHh--CCCCCCCcccHHHHHHHHHHCCCcEEEECCcEEEEeCCCCH
Confidence            0000000000000011112222356789999999999  3333 3445799999999999999999996544443 3332


Q ss_pred             chhHHHHHHHHHHHHHHHHhcch
Q psy7267         325 VPVFSWIQMGWDVLNIWLHYTLG  347 (569)
Q Consensus       325 ~~~~~~~~~~~~~l~~r~ry~~g  347 (569)
                                +.+++++.||..|
T Consensus       216 ----------~~~~~q~~RW~~g  228 (228)
T PF13641_consen  216 ----------KAFFKQRFRWSRG  228 (228)
T ss_dssp             ----------HHHHHHHHHHH--
T ss_pred             ----------HHHHHHHhccCcC
Confidence                      6677788888654

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=99.91  E-value=2.1e-23  Score=205.39  Aligned_cols=220  Identities=16%  Similarity=0.155  Sum_probs=151.6

Q ss_pred             cEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChH
Q psy7267          91 NLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKG  169 (569)
Q Consensus        91 ~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka  169 (569)
                      +||||||+|||+ +.|.+||+++.+|      +    +.||+||||||+|+|.+.+++.. .+  +.+.++. .+|.||+
T Consensus         1 ~isVvIp~~ne~~~~l~~~l~sl~~q------~----~~eiivvdd~s~d~~~~~l~~~~-~~--~~~~v~~-~~~~g~~   66 (235)
T cd06434           1 DVTVIIPVYDEDPDVFRECLRSILRQ------K----PLEIIVVTDGDDEPYLSILSQTV-KY--GGIFVIT-VPHPGKR   66 (235)
T ss_pred             CeEEEEeecCCChHHHHHHHHHHHhC------C----CCEEEEEeCCCChHHHHHHHhhc-cC--CcEEEEe-cCCCChH
Confidence            389999999999 9999999999986      2    46999999999999999875433 22  5566665 7789999


Q ss_pred             HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHh
Q psy7267         170 GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNIL  249 (569)
Q Consensus       170 ~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~  249 (569)
                      .|+|.|++.|++|+|+++|+|+.++|++|+++++.+++              ++++++.|....................
T Consensus        67 ~a~n~g~~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~--------------~~v~~v~~~~~~~~~~~~~~~~~~~~~~  132 (235)
T cd06434          67 RALAEGIRHVTTDIVVLLDSDTVWPPNALPEMLKPFED--------------PKVGGVGTNQRILRPRDSKWSFLAAEYL  132 (235)
T ss_pred             HHHHHHHHHhCCCEEEEECCCceeChhHHHHHHHhccC--------------CCEeEEcCceEeecCcccHHHHHHHHHH
Confidence            99999999999999999999999999999999999984              4667777655433321111111111111


Q ss_pred             hhhh-hhHhhhcccccccccccceeeEeHHHHHHH-hccc--------cCCchhhchHHHHHHHHcCCCEEEEEEE--EE
Q psy7267         250 MKGF-HFIVWFTGVRTIRDTQCGFKLFTRKSALQL-FSSI--------HVQRWAFDVELLFIAEVLHIPMAEVSVN--WT  317 (569)
Q Consensus       250 ~~~~-~~l~~~~~~~~i~d~~~gf~lfrR~al~~I-~~~~--------~~e~~~~D~EL~~Ra~~~G~rI~~vPv~--~~  317 (569)
                      .... ................+.+.++||++++++ +...        ......+|.+++.|+.+.|+++.+.|..  ++
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~  212 (235)
T cd06434         133 ERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYT  212 (235)
T ss_pred             HHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEE
Confidence            1000 000001111122223445678999999986 1111        1123456999999999999999998743  33


Q ss_pred             EecCCccchhHHHHHHHHHHHHHHHHhcchhh
Q psy7267         318 EIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLW  349 (569)
Q Consensus       318 ~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w  349 (569)
                      +.+.+           .+.+++++.||..|.|
T Consensus       213 ~~~~~-----------~~~~~~q~~Rw~~~~~  233 (235)
T cd06434         213 ETPEN-----------YKKFLKQQLRWSRSNW  233 (235)
T ss_pred             Ecchh-----------HHHHHHHhhhhhhccc
Confidence            32222           2567788888887764

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine

Probab=99.91  E-value=6.3e-23  Score=201.14  Aligned_cols=204  Identities=15%  Similarity=0.129  Sum_probs=140.7

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEc----CCCCChH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKL----LKNRGKG  169 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~----~~n~Gka  169 (569)
                      ||||+||+++.|+++|+|+++|      .|| .++|||||||||+|+|.++++++.++++..+++++..    ++|.|.+
T Consensus         1 ViIp~yn~~~~l~~~l~sl~~q------~~~-~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~   73 (219)
T cd06913           1 IILPVHNGEQWLDECLESVLQQ------DFE-GTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVG   73 (219)
T ss_pred             CEEeecCcHHHHHHHHHHHHhC------CCC-CCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHH
Confidence            6999999999999999999887      565 2689999999999999999999887765456777643    3468999


Q ss_pred             HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeec-ccccchhhHHHHHH
Q psy7267         170 GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHL-EALANVQRSFFRNI  248 (569)
Q Consensus       170 ~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~-~~~~~~~~~~~r~~  248 (569)
                      .|+|.|++.|+|||++++|+|+.++|+++++++..+.+++               +.++|.+... .++...........
T Consensus        74 ~a~N~g~~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~~~~~~~~~~  138 (219)
T cd06913          74 YAKNQAIAQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHP---------------NSIIGCQVRRIPEDSTERYTRWINT  138 (219)
T ss_pred             HHHHHHHHhcCCCEEEEECCCccCChhHHHHHHHHHHhCC---------------CcEEEEEEEecCcccchhhHHHHHh
Confidence            9999999999999999999999999999999988887641               2233443322 11111111101010


Q ss_pred             hhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCc---hhhchHHHHHHHHcCCCEEEEE---EEEEEecCC
Q psy7267         249 LMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQR---WAFDVELLFIAEVLHIPMAEVS---VNWTEIEGS  322 (569)
Q Consensus       249 ~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~---~~~D~EL~~Ra~~~G~rI~~vP---v~~~~~~GS  322 (569)
                      ... ............. .......++||++++++  +.+++.   +.+|.+|+.|+.++|.++..+|   +.|+.+.+|
T Consensus       139 ~~~-~~~~~~~~~~~~~-~~~~~~~~~rr~~~~~~--g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~~~s  214 (219)
T cd06913         139 LTR-EQLLTQVYTSHGP-TVIMPTWFCSREWFSHV--GPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLLYRYHPGA  214 (219)
T ss_pred             cCH-HHHHHHHHhhcCC-ccccccceeehhHHhhc--CCccchhccchhHHHHHHHHHHcCCceEEEcceeeeeeecCCC
Confidence            000 0011111111111 11112357999999998  444443   3579999999999999999886   455555554


Q ss_pred             c
Q psy7267         323 K  323 (569)
Q Consensus       323 ~  323 (569)
                      .
T Consensus       215 ~  215 (219)
T cd06913         215 T  215 (219)
T ss_pred             c
Confidence            4

This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=99.91  E-value=1.9e-23  Score=197.79  Aligned_cols=185  Identities=36%  Similarity=0.551  Sum_probs=149.3

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+||+++.|.++|+++.++..      +...+||+||||+|+|+|.++++++.+++  +.++++..++|.|++.|+|
T Consensus         1 iii~~~n~~~~l~~~l~sl~~~~~------~~~~~eiivvd~~s~d~~~~~~~~~~~~~--~~~~~~~~~~n~G~~~a~n   72 (185)
T cd04179           1 VVIPAYNEEENIPELVERLLAVLE------EGYDYEIIVVDDGSTDGTAEIARELAARV--PRVRVIRLSRNFGKGAAVR   72 (185)
T ss_pred             CeecccChHhhHHHHHHHHHHHhc------cCCCEEEEEEcCCCCCChHHHHHHHHHhC--CCeEEEEccCCCCccHHHH
Confidence            689999999999999999999843      23378999999999999999999998887  5678899999999999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGF  253 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~  253 (569)
                      .|++.|+|||++++|+|+.+.|++|+++++.+.+              .+.++++|.+....+.  ......+.+.....
T Consensus        73 ~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~~~--------------~~~~~v~g~~~~~~~~--~~~~~~~~~~~~~~  136 (185)
T cd04179          73 AGFKAARGDIVVTMDADLQHPPEDIPKLLEKLLE--------------GGADVVIGSRFVRGGG--AGMPLLRRLGSRLF  136 (185)
T ss_pred             HHHHHhcCCEEEEEeCCCCCCHHHHHHHHHHHhc--------------cCCcEEEEEeecCCCc--ccchHHHHHHHHHH
Confidence            9999999999999999999999999999998665              3568888887654432  22333444444444


Q ss_pred             hhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHH
Q psy7267         254 HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIA  302 (569)
Q Consensus       254 ~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra  302 (569)
                      ...........+....+++.+++|++++++..+...++|.+|.|++.|+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~~~~~~~~~~~~  185 (185)
T cd04179         137 NFLIRLLLGVRISDTQSGFRLFRREVLEALLSLLESNGFEFGLELLVGA  185 (185)
T ss_pred             HHHHHHHcCCCCcCCCCceeeeHHHHHHHHHhhccccCcceeeEeeecC
Confidence            4444444556677788889999999999995455668888899888764

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=99.91  E-value=2.6e-23  Score=199.84  Aligned_cols=191  Identities=17%  Similarity=0.232  Sum_probs=141.3

Q ss_pred             ccEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHH-HHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          90 VNLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTM-QVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        90 p~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~-eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      |++|||||+||++ +.++++|+|+++|      .|+  ++||+||||||+|++. ++++++..+.  ++++++.+++|.|
T Consensus         1 p~vsiii~~~n~~~~~l~~~l~sl~~q------~~~--~~eiivvd~gs~d~~~~~~~~~~~~~~--~~~~~~~~~~~~g   70 (202)
T cd04184           1 PLISIVMPVYNTPEKYLREAIESVRAQ------TYP--NWELCIADDASTDPEVKRVLKKYAAQD--PRIKVVFREENGG   70 (202)
T ss_pred             CeEEEEEecccCcHHHHHHHHHHHHhC------cCC--CeEEEEEeCCCCChHHHHHHHHHHhcC--CCEEEEEcccCCC
Confidence            4699999999999 9999999999987      444  6899999999999865 4556655554  6788888899999


Q ss_pred             hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHH
Q psy7267         168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRN  247 (569)
Q Consensus       168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~  247 (569)
                      ++.|+|.|++.+++||++++|+|+.++|++++++++.+.++             ++.+++++................  
T Consensus        71 ~~~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~--  135 (202)
T cd04184          71 ISAATNSALELATGEFVALLDHDDELAPHALYEVVKALNEH-------------PDADLIYSDEDKIDEGGKRSEPFF--  135 (202)
T ss_pred             HHHHHHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHHHhC-------------CCCCEEEccHHhccCCCCEecccc--
Confidence            99999999999999999999999999999999999999554             455677664432221111111000  


Q ss_pred             HhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCch--hhchHHHHHHHHcCCCEEEEEE
Q psy7267         248 ILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW--AFDVELLFIAEVLHIPMAEVSV  314 (569)
Q Consensus       248 ~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~--~~D~EL~~Ra~~~G~rI~~vPv  314 (569)
                        .....  ......   ....+++.++||++++++  +.+++.+  .+|.||+.|+.++|+++.++|.
T Consensus       136 --~~~~~--~~~~~~---~~~~~~~~~~~r~~~~~i--ggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~  195 (202)
T cd04184         136 --KPDWS--PDLLLS---QNYIGHLLVYRRSLVRQV--GGFREGFEGAQDYDLVLRVSEHTDRIAHIPR  195 (202)
T ss_pred             --CCCCC--HHHhhh---cCCccceEeEEHHHHHHh--CCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence              00000  000000   123456679999999999  4444433  4699999999999999999984

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional

Probab=99.90  E-value=1e-22  Score=211.94  Aligned_cols=226  Identities=19%  Similarity=0.149  Sum_probs=157.0

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEE-EcCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGL-KLLKNR  166 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi-~~~~n~  166 (569)
                      ..+++|||||+|||++.|.++|+++.+++..      ...+|||||||||+|+|.++++++..+.- ....++ .++.|.
T Consensus        29 ~~~~vSVVIPayNee~~I~~~l~sl~~~~~~------~~~~EIIVVDDgStD~T~~ia~~~~~~v~-~~~~~~~~~~~n~  101 (306)
T PRK13915         29 AGRTVSVVLPALNEEETVGKVVDSIRPLLME------PLVDELIVIDSGSTDATAERAAAAGARVV-SREEILPELPPRP  101 (306)
T ss_pred             CCCCEEEEEecCCcHHHHHHHHHHHHHHhcc------CCCcEEEEEeCCCccHHHHHHHHhcchhh-cchhhhhccccCC
Confidence            4678999999999999999999999987532      12579999999999999999998754320 111222 236789


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccc-cc----ch
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEA-LA----NV  240 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~-~~----~~  240 (569)
                      ||+.|+|.|++.+++|+|+++|+|+. ++|++++++++.+..+             +++++|.|.+..... ..    ..
T Consensus       102 Gkg~A~~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~-------------~~~~~V~g~~~r~~~~~~~~~~~~  168 (306)
T PRK13915        102 GKGEALWRSLAATTGDIVVFVDADLINFDPMFVPGLLGPLLTD-------------PGVHLVKAFYRRPLRVSGGVDATG  168 (306)
T ss_pred             CHHHHHHHHHHhcCCCEEEEEeCccccCCHHHHHHHHHHHHhC-------------CCceEEEEEeccccccccccCcCC
Confidence            99999999999999999999999996 8999999999999753             567888886432110 00    00


Q ss_pred             hhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHH-cCC-CEEEEEEEEEE
Q psy7267         241 QRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEV-LHI-PMAEVSVNWTE  318 (569)
Q Consensus       241 ~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~-~G~-rI~~vPv~~~~  318 (569)
                      .....+......+..+...  ...+.++.+|++++||++++++  .. ..+|.+|++++..+.+ .|. ++.++++..+.
T Consensus       169 ~gr~~~~~~~~l~~~~~~~--l~~i~dp~sG~~a~rr~~l~~l--~~-~~~yg~e~~~l~~~~~~~g~~~i~~V~l~~r~  243 (306)
T PRK13915        169 GGRVTELVARPLLNLLRPE--LAGFVQPLGGEYAGRRELLESL--PF-VPGYGVEIGLLIDTLDRLGLDAIAQVDLGVRA  243 (306)
T ss_pred             CCchHHHHHHHHHHHHHHh--hhcccCcchHhHHHHHHHHHhC--CC-CCCCeehHHHHHHHHHHhCcCceEEEEecccc
Confidence            0001111111111111111  1256688889999999999998  33 3668889999998874 687 89999876655


Q ss_pred             ecCCccchhHHHHHHHHHHHHHH
Q psy7267         319 IEGSKIVPVFSWIQMGWDVLNIW  341 (569)
Q Consensus       319 ~~GS~~~~~~~~~~~~~~~l~~r  341 (569)
                      +..   .+.+...+|....+...
T Consensus       244 h~~---~~~~~~~~m~~~i~~~~  263 (306)
T PRK13915        244 HRN---QPLRALGRMARQIIATA  263 (306)
T ss_pred             cCC---CCHHHHHHHHHHHHHHH
Confidence            542   23445555555555443

>PRK10073 putative glycosyl transferase; Provisional

Probab=99.90  E-value=7.1e-23  Score=215.02  Aligned_cols=206  Identities=20%  Similarity=0.222  Sum_probs=146.3

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      .|.||||||+||+++.|++||+|+++|      .|+  ++|||||||||+|+|.++++++.+++  +++++++ .+|.|.
T Consensus         5 ~p~vSVIIP~yN~~~~L~~~l~Sl~~Q------t~~--~~EIIiVdDgStD~t~~i~~~~~~~~--~~i~vi~-~~n~G~   73 (328)
T PRK10073          5 TPKLSIIIPLYNAGKDFRAFMESLIAQ------TWT--ALEIIIVNDGSTDNSVEIAKHYAENY--PHVRLLH-QANAGV   73 (328)
T ss_pred             CCeEEEEEeccCCHHHHHHHHHHHHhC------CCC--CeEEEEEeCCCCccHHHHHHHHHhhC--CCEEEEE-CCCCCh
Confidence            477999999999999999999999988      454  78999999999999999999998877  7899987 579999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHH--H
Q psy7267         169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFF--R  246 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~--r  246 (569)
                      +.|+|.|++.|+||||+++|+|+.+.|++++++++.+++              ++.|++.+.......++.......  .
T Consensus        74 ~~arN~gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~~~--------------~~~dvv~~~~~~~~~~~~~~~~~~~~~  139 (328)
T PRK10073         74 SVARNTGLAVATGKYVAFPDADDVVYPTMYETLMTMALE--------------DDLDVAQCNADWCFRDTGETWQSIPSD  139 (328)
T ss_pred             HHHHHHHHHhCCCCEEEEECCCCccChhHHHHHHHHHHh--------------CCCCEEEEccEEEEeCCCccccccccc
Confidence            999999999999999999999999999999999998876              345666654321111110000000  0


Q ss_pred             HH----hhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccc-cCCch-hhchHHHHHHHHcCCCEEEEE---EEEE
Q psy7267         247 NI----LMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSI-HVQRW-AFDVELLFIAEVLHIPMAEVS---VNWT  317 (569)
Q Consensus       247 ~~----~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~-~~e~~-~~D~EL~~Ra~~~G~rI~~vP---v~~~  317 (569)
                      ..    ......++............ ....++||+++++.  +. +.++. .+|.++..++...+.++.+++   +.|+
T Consensus       140 ~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~l~Rr~~l~~~--~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ly~Yr  216 (328)
T PRK10073        140 RLRSTGVLSGPDWLRMALSSRRWTHV-VWLGVYRRDFIVKN--NIKFEPGLHHQDIPWTTEVMFNALRVRYTEQSLYKYY  216 (328)
T ss_pred             cccccceechHHHHHHHHhhCCCCcc-HhHHHHHHHHHHHc--CCccCCCCEeccHHHHHHHHHHCCEEEEECCCEEEEE
Confidence            00    00001111111111122221 23468999999986  32 22332 369999999999999999886   4555


Q ss_pred             EecCC
Q psy7267         318 EIEGS  322 (569)
Q Consensus       318 ~~~GS  322 (569)
                      .+.+|
T Consensus       217 ~~~~S  221 (328)
T PRK10073        217 LHDTS  221 (328)
T ss_pred             ecCCc
Confidence            56653

>PRK14716 bacteriophage N4 adsorption protein B; Provisional

Probab=99.90  E-value=2.3e-22  Score=221.16  Aligned_cols=236  Identities=15%  Similarity=0.140  Sum_probs=155.7

Q ss_pred             CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC--
Q psy7267          87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK--  164 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~--  164 (569)
                      .+.|+++|+||+|||+++|+++|+++++++     +||  ++||+|+||+|+|+|.+.++++.+++  ++++++..++  
T Consensus        63 ~~~p~vaIlIPA~NE~~vI~~~l~s~L~~l-----dY~--~~eIiVv~d~ndd~T~~~v~~l~~~~--p~v~~vv~~~~g  133 (504)
T PRK14716         63 VPEKRIAIFVPAWREADVIGRMLEHNLATL-----DYE--NYRIFVGTYPNDPATLREVDRLAARY--PRVHLVIVPHDG  133 (504)
T ss_pred             CCCCceEEEEeccCchhHHHHHHHHHHHcC-----CCC--CeEEEEEECCCChhHHHHHHHHHHHC--CCeEEEEeCCCC
Confidence            346789999999999999999999976541     676  78999999999999999999999888  5566544333  


Q ss_pred             CCChHHHHHHHHHhc------cC---cEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecc
Q psy7267         165 NRGKGGAVTLGTKCA------RG---SIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLE  235 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A------~g---d~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~  235 (569)
                      ..||+.|+|.|++.+      +|   |+|+++|||+.++|+.++.+...+.+                .++++......+
T Consensus       134 p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~~----------------~~~VQ~pv~~~~  197 (504)
T PRK14716        134 PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLPR----------------HDFVQLPVFSLP  197 (504)
T ss_pred             CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcCC----------------CCEEecceeccC
Confidence            346999999999764      45   99999999999999999987655433                244443222111


Q ss_pred             c--ccchhhHHHHHHhhhhhhhH-hhhcccccccccccceeeEeHHHHHHHh---cc--ccCCchhhchHHHHHHHHcCC
Q psy7267         236 A--LANVQRSFFRNILMKGFHFI-VWFTGVRTIRDTQCGFKLFTRKSALQLF---SS--IHVQRWAFDVELLFIAEVLHI  307 (569)
Q Consensus       236 ~--~~~~~~~~~r~~~~~~~~~l-~~~~~~~~i~d~~~gf~lfrR~al~~I~---~~--~~~e~~~~D~EL~~Ra~~~G~  307 (569)
                      .  ...........+.......+ .+...+ ......|...+|||++++++.   ++  +..+...||+|+..|+..+|+
T Consensus       198 ~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG-~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sLTED~dLglRL~~~G~  276 (504)
T PRK14716        198 RDWGEWVAGTYMDEFAESHLKDLPVREALG-GLIPSAGVGTAFSRRALERLAAERGGQPFDSDSLTEDYDIGLRLKRAGF  276 (504)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCcchHHHHHHHHHHCCC
Confidence            1  11111111111111111111 111122 112233456799999999982   22  444568899999999999999


Q ss_pred             CEEEEEEEEEE--ec----CCccchhHHHHHHHHHHHHHHHHhcchh
Q psy7267         308 PMAEVSVNWTE--IE----GSKIVPVFSWIQMGWDVLNIWLHYTLGL  348 (569)
Q Consensus       308 rI~~vPv~~~~--~~----GS~~~~~~~~~~~~~~~l~~r~ry~~g~  348 (569)
                      ++.++|.....  ..    +..+.........++...+||.||..|+
T Consensus       277 rv~y~p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi  323 (504)
T PRK14716        277 RQIFVRVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGI  323 (504)
T ss_pred             EEEEecccccccccccccccccccccccCccCHHHHHHHHHHHHhch
Confidence            99999865322  00    1111111122334578899999999995

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=99.90  E-value=5.6e-23  Score=197.63  Aligned_cols=192  Identities=18%  Similarity=0.185  Sum_probs=140.9

Q ss_pred             EEEEeecCCCC--ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC-CccHHHHHHHHhHhhCCCeEEEEEcCCCCChH
Q psy7267          93 SVIVPAYNEQD--RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS-TDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKG  169 (569)
Q Consensus        93 SVIIP~yNE~~--~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS-tD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka  169 (569)
                      ||+||+||++.  .|+++|+|+++|      .|+  +.||||||||| +|+|.++++++.+++  + ++++.+++|.|++
T Consensus         1 sviip~~n~~~~~~l~~~l~Sl~~q------~~~--~~eiiivdd~ss~d~t~~~~~~~~~~~--~-i~~i~~~~n~G~~   69 (201)
T cd04195           1 SVLMSVYIKEKPEFLREALESILKQ------TLP--PDEVVLVKDGPVTQSLNEVLEEFKRKL--P-LKVVPLEKNRGLG   69 (201)
T ss_pred             CEEEEccccchHHHHHHHHHHHHhc------CCC--CcEEEEEECCCCchhHHHHHHHHHhcC--C-eEEEEcCccccHH
Confidence            69999999984  899999999988      555  57999999998 788999999988775  3 8889989999999


Q ss_pred             HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHh
Q psy7267         170 GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNIL  249 (569)
Q Consensus       170 ~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~  249 (569)
                      .|+|.|+++++||||+++|+|+.++|++++.+++.++++             ++.+++.|........+.......  ..
T Consensus        70 ~a~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~--~~  134 (201)
T cd04195          70 KALNEGLKHCTYDWVARMDTDDISLPDRFEKQLDFIEKN-------------PEIDIVGGGVLEFDSDGNDIGKRR--LP  134 (201)
T ss_pred             HHHHHHHHhcCCCEEEEeCCccccCcHHHHHHHHHHHhC-------------CCeEEEcccEEEECCCCCeecccc--CC
Confidence            999999999999999999999999999999999999875             455666665443322221111000  00


Q ss_pred             hhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEEEEE
Q psy7267         250 MKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSV  314 (569)
Q Consensus       250 ~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv  314 (569)
                      ...............   ..++..++||++++++ ++.....+.+|.++..|+..+|+++.++|.
T Consensus       135 ~~~~~~~~~~~~~~~---~~~~~~~~rr~~~~~~-g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~  195 (201)
T cd04195         135 TSHDDILKFARRRSP---FNHPTVMFRKSKVLAV-GGYQDLPLVEDYALWARMLANGARFANLPE  195 (201)
T ss_pred             CCHHHHHHHhccCCC---CCChHHhhhHHHHHHc-CCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence            000000000011111   2234568999999998 333334677899999999999999998873

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.89  E-value=3.4e-22  Score=192.88  Aligned_cols=194  Identities=19%  Similarity=0.155  Sum_probs=139.7

Q ss_pred             EEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHH
Q psy7267          93 SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAV  172 (569)
Q Consensus        93 SVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~Al  172 (569)
                      |||||+||+++.|+++|+|+++|      +||  ++|||||||||+|+|.++++++.++++ ..++++..++|.|++.++
T Consensus         1 sIvIp~yn~~~~l~~~l~sl~~q------~~~--~~eiiVvddgS~d~t~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~   71 (214)
T cd04196           1 AVLMATYNGEKYLREQLDSILAQ------TYK--NDELIISDDGSTDGTVEIIKEYIDKDP-FIIILIRNGKNLGVARNF   71 (214)
T ss_pred             CEEEEecCcHHHHHHHHHHHHhC------cCC--CeEEEEEeCCCCCCcHHHHHHHHhcCC-ceEEEEeCCCCccHHHHH
Confidence            68999999999999999999997      555  789999999999999999999988774 467788888999999999


Q ss_pred             HHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccccc-chhhHHHHHHhhh
Q psy7267         173 TLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALA-NVQRSFFRNILMK  251 (569)
Q Consensus       173 N~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~-~~~~~~~r~~~~~  251 (569)
                      |.|++.++||||+++|+|+.++|++|.++++.+...             +..+++.+.....+.+. .............
T Consensus        72 n~g~~~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (214)
T cd04196          72 ESLLQAADGDYVFFCDQDDIWLPDKLERLLKAFLKD-------------DKPLLVYSDLELVDENGNPIGESFFEYQKIK  138 (214)
T ss_pred             HHHHHhCCCCEEEEECCCcccChhHHHHHHHHHhcC-------------CCceEEecCcEEECCCCCCcccccccccccC
Confidence            999999999999999999999999999999996654             45566666543322221 1111111110000


Q ss_pred             hhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC--chhhchHHHHHHHHcCCCEEEEEE
Q psy7267         252 GFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ--RWAFDVELLFIAEVLHIPMAEVSV  314 (569)
Q Consensus       252 ~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e--~~~~D~EL~~Ra~~~G~rI~~vPv  314 (569)
                      ............   ...++..++||++++++  +...+  .+.+|.++..++.+ +.++..+|.
T Consensus       139 ~~~~~~~~~~~~---~~~~~~~~~r~~~~~~~--~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~  197 (214)
T cd04196         139 PGTSFNNLLFQN---VVTGCTMAFNRELLELA--LPFPDADVIMHDWWLALLASA-FGKVVFLDE  197 (214)
T ss_pred             CccCHHHHHHhC---ccCCceeeEEHHHHHhh--ccccccccccchHHHHHHHHH-cCceEEcch
Confidence            000011111111   12234569999999998  33333  46678888887777 668888764

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=99.88  E-value=1.5e-21  Score=185.36  Aligned_cols=169  Identities=27%  Similarity=0.398  Sum_probs=134.7

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+||+++.|.++++++.+++.+   .+  ..+||+||||||+|+|.++++++.+++  ++++++.+.+|.|++.|+|
T Consensus         1 viIp~~n~~~~l~~~l~sl~~~~~~---~~--~~~eiivvdd~s~d~t~~~~~~~~~~~--~~i~~i~~~~n~G~~~a~n   73 (181)
T cd04187           1 IVVPVYNEEENLPELYERLKAVLES---LG--YDYEIIFVDDGSTDRTLEILRELAARD--PRVKVIRLSRNFGQQAALL   73 (181)
T ss_pred             CEEeecCchhhHHHHHHHHHHHHHh---cC--CCeEEEEEeCCCCccHHHHHHHHHhhC--CCEEEEEecCCCCcHHHHH
Confidence            6999999999999999999887664   12  278999999999999999999998776  6899999899999999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGF  253 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~  253 (569)
                      .|++.+++|+|+++|+|+.+++++++++++.+++               +.++|.|.+.... .     .....+.....
T Consensus        74 ~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~~~---------------~~~~v~g~~~~~~-~-----~~~~~~~~~~~  132 (181)
T cd04187          74 AGLDHARGDAVITMDADLQDPPELIPEMLAKWEE---------------GYDVVYGVRKNRK-E-----SWLKRLTSKLF  132 (181)
T ss_pred             HHHHhcCCCEEEEEeCCCCCCHHHHHHHHHHHhC---------------CCcEEEEEecCCc-c-----hHHHHHHHHHH
Confidence            9999999999999999999999999999998543               4578888876433 2     12223333333


Q ss_pred             hhHhhhcccccccccccceeeEeHHHHHHHhccccCCch
Q psy7267         254 HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW  292 (569)
Q Consensus       254 ~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~  292 (569)
                      ...........+.+..+++++++|++++++  +..++.+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i--~~~d~~~  169 (181)
T cd04187         133 YRLINKLSGVDIPDNGGDFRLMDRKVVDAL--LLLPERH  169 (181)
T ss_pred             HHHHHHHcCCCCCCCCCCEEEEcHHHHHHH--HhcCCCC
Confidence            333334455677888899999999999999  4444433

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>PRK10063 putative glycosyl transferase; Provisional

Probab=99.88  E-value=6.8e-21  Score=192.48  Aligned_cols=191  Identities=17%  Similarity=0.133  Sum_probs=132.8

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChH
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKG  169 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka  169 (569)
                      |.||||||+||+++.|+++|+|+.++...     +..++|||||||||+|+|.++++++.++   .+++++.. +|.|.+
T Consensus         1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~-----~~~~~EiIVvDdgStD~t~~i~~~~~~~---~~i~~i~~-~~~G~~   71 (248)
T PRK10063          1 MLLSVITVAFRNLEGIVKTHASLRHLAQD-----PGISFEWIVVDGGSNDGTREFLENLNGI---FNLRFVSE-PDNGIY   71 (248)
T ss_pred             CeEEEEEEeCCCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEECcCcccHHHHHHHhccc---CCEEEEEC-CCCCHH
Confidence            56999999999999999999999876432     2237899999999999999999987543   35888874 577999


Q ss_pred             HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccccc-chhhHHHHHH
Q psy7267         170 GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALA-NVQRSFFRNI  248 (569)
Q Consensus       170 ~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~-~~~~~~~r~~  248 (569)
                      .|+|.|++.|+||||+++|+|+.+.|+.++.+ ..+...             +..++++|.+....+++ ...+..... 
T Consensus        72 ~A~N~Gi~~a~g~~v~~ld~DD~~~~~~~~~~-~~~~~~-------------~~~~~v~g~~~~~~~~~~~~~~~~~~~-  136 (248)
T PRK10063         72 DAMNKGIAMAQGRFALFLNSGDIFHQDAANFV-RQLKMQ-------------KDNAMIIGDALLDFGDGHKIKRSAKPG-  136 (248)
T ss_pred             HHHHHHHHHcCCCEEEEEeCCcccCcCHHHHH-HHHHhC-------------CCCeEEEeeeEEEcCCCcEEEEccCCh-
Confidence            99999999999999999999999999876543 344332             33467777765322111 100000000 


Q ss_pred             hhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC--chhhchHHHHHHHHcCCCEEEEEEEEEE
Q psy7267         249 LMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ--RWAFDVELLFIAEVLHIPMAEVSVNWTE  318 (569)
Q Consensus       249 ~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e--~~~~D~EL~~Ra~~~G~rI~~vPv~~~~  318 (569)
                           ..   ......   ......+++|+.++..  + +++  .+.+|.|+..|+...|+++.++|.....
T Consensus       137 -----~~---~~~~~~---~~~~~~~~~~~~~~~~--~-fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~  194 (248)
T PRK10063        137 -----WY---IYHSLP---ASHQAIFFPVSGLKKW--R-YDLQYKVSSDYALAARLYKAGYAFKKLNGLVSE  194 (248)
T ss_pred             -----hH---HhcCCC---CCCcEEEEEHHHHhcC--C-CCcccchHHhHHHHHHHHHcCCcEEEcCceeEE
Confidence                 00   000001   1112347788887753  2 233  3457999999999999999999865444

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin

Probab=99.88  E-value=4.7e-22  Score=199.69  Aligned_cols=201  Identities=16%  Similarity=0.032  Sum_probs=139.4

Q ss_pred             EEEeecCCC-CChHHHHHHHHHHHHhhhccCC--------CCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          94 VIVPAYNEQ-DRLKPMLDETIEFLNERRKKIP--------TFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        94 VIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp--------~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ||||+|||+ ..|+++|+|+++|      +||        .+++||+||||||+|                        .
T Consensus         1 v~ip~yNE~~~~i~~~l~sv~~q------~y~~~~~~~~~~~~~evivv~Dgs~d------------------------~   50 (244)
T cd04190           1 VCVTMYNEDEEELARTLDSILKN------DYPFCARGGDSWKKIVVCVIFDGAIK------------------------K   50 (244)
T ss_pred             CEEeeecCCHHHHHHHHHHHHHh------hHHHHhcCCCCccEEEEEEEeCCccc------------------------c
Confidence            699999997 7999999999999      888        779999999999999                        3


Q ss_pred             CCChHH-------HHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccc
Q psy7267         165 NRGKGG-------AVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEAL  237 (569)
Q Consensus       165 n~Gka~-------AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~  237 (569)
                      |.||+.       ++|.++..+++|+|+++|+|+.++|++|.++++.|..+             ++++.|.|.....+..
T Consensus        51 ~~gk~~~~~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~-------------p~vg~v~g~~~~~~~~  117 (244)
T cd04190          51 NRGKRDSQLWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKD-------------PEIGGVCGEIHPMGKK  117 (244)
T ss_pred             cCcchHHHHHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhC-------------CCEEEEEeeeEEcCCc
Confidence            455554       67888888999999999999999999999999999754             4566677765433321


Q ss_pred             -cchhhHHHHHHh-hhhhhhHhhhcccccccccccceeeEeHHHHHHHhcccc------------C-------Cchhhch
Q psy7267         238 -ANVQRSFFRNIL-MKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIH------------V-------QRWAFDV  296 (569)
Q Consensus       238 -~~~~~~~~r~~~-~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~------------~-------e~~~~D~  296 (569)
                       +.........+. ............+ ......|.+.+||+++++++.....            .       ....+|.
T Consensus       118 ~~~~~~~q~~ey~~~~~~~~~~~s~~g-~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~  196 (244)
T cd04190         118 QGPLVMYQVFEYAISHWLDKAFESVFG-FVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDR  196 (244)
T ss_pred             chhHHHhHheehhhhhhhcccHHHcCC-ceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhccc
Confidence             211111100000 0000000011111 1233445678999999998722111            0       1246799


Q ss_pred             HHHHHHHHcCCCEEE--EEEE--EEEecCCccchhHHHHHHHHHHHHHHHHhcchhh
Q psy7267         297 ELLFIAEVLHIPMAE--VSVN--WTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLW  349 (569)
Q Consensus       297 EL~~Ra~~~G~rI~~--vPv~--~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w  349 (569)
                      +|+.++..+|+++.+  .|..  +++.+.|.           +.+++||.||..|.+
T Consensus       197 ~l~~~l~~~G~~~~~~~~~~a~~~~~~p~s~-----------~~~~~QR~RW~~g~~  242 (244)
T cd04190         197 ILCTLLLKAGPKRKYLYVPGAVAETDVPETF-----------VELLSQRRRWINSTI  242 (244)
T ss_pred             ceeHHHhccCCccEEEEecccEEEEECCCCH-----------HHHHHHhHhhhcccc
Confidence            999999999999998  7744  34433344           678899999988864

Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=99.88  E-value=9.8e-22  Score=186.76  Aligned_cols=188  Identities=20%  Similarity=0.198  Sum_probs=137.6

Q ss_pred             EEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHH
Q psy7267          93 SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAV  172 (569)
Q Consensus        93 SVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~Al  172 (569)
                      |||||+||+++.|+++|+++.+|      .++  ++||+||||||+|+|.++++++..+     +..+.+.+|.|++.|+
T Consensus         1 sivi~~~n~~~~l~~~l~sl~~q------~~~--~~evivvDd~s~d~~~~~~~~~~~~-----~~~~~~~~~~g~~~a~   67 (202)
T cd06433           1 SIITPTYNQAETLEETIDSVLSQ------TYP--NIEYIVIDGGSTDGTVDIIKKYEDK-----ITYWISEPDKGIYDAM   67 (202)
T ss_pred             CEEEeccchHHHHHHHHHHHHhC------CCC--CceEEEEeCCCCccHHHHHHHhHhh-----cEEEEecCCcCHHHHH
Confidence            68999999999999999999887      444  5899999999999999999987543     3344558899999999


Q ss_pred             HHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhh
Q psy7267         173 TLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKG  252 (569)
Q Consensus       173 N~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~  252 (569)
                      |.|++.|++|||+++|+|+.+.++++.+++..+...             ++.+++.|.......+........     ..
T Consensus        68 n~~~~~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~-------------~~~~~v~g~~~~~~~~~~~~~~~~-----~~  129 (202)
T cd06433          68 NKGIALATGDIIGFLNSDDTLLPGALLAVVAAFAEH-------------PEVDVVYGDVLLVDENGRVIGRRR-----PP  129 (202)
T ss_pred             HHHHHHcCCCEEEEeCCCcccCchHHHHHHHHHHhC-------------CCccEEEeeeEEEcCCCCcccCCC-----Cc
Confidence            999999999999999999999999999999776664             567888887654332221111000     00


Q ss_pred             hhhHhhhcccccccccccceeeEeHHHHHHHhccccCCc--hhhchHHHHHHHHcCCCEEEEEEEE
Q psy7267         253 FHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQR--WAFDVELLFIAEVLHIPMAEVSVNW  316 (569)
Q Consensus       253 ~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~--~~~D~EL~~Ra~~~G~rI~~vPv~~  316 (569)
                      ............   ..+...+++|++++++  +.+++.  +.+|.|++.|+.+.|+++..+|...
T Consensus       130 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~  190 (202)
T cd06433         130 PFLDKFLLYGMP---ICHQATFFRRSLFEKY--GGFDESYRIAADYDLLLRLLLAGKIFKYLPEVL  190 (202)
T ss_pred             chhhhHHhhcCc---ccCcceEEEHHHHHHh--CCCchhhCchhhHHHHHHHHHcCCceEecchhh
Confidence            000000111111   1123358999999998  434443  4569999999999999998887543

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis

Probab=99.87  E-value=1e-21  Score=187.70  Aligned_cols=176  Identities=20%  Similarity=0.176  Sum_probs=123.0

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+|||++.|.++|+++.+|      +||...+||+||||||+|+|.++++++.     ..+.+....+|.||+.|+|
T Consensus         1 VvIp~~ne~~~i~~~l~sl~~~------~~p~~~~eiivvdd~s~D~t~~~~~~~~-----~~~~~~~~~~~~gk~~aln   69 (183)
T cd06438           1 ILIPAHNEEAVIGNTVRSLKAQ------DYPRELYRIFVVADNCTDDTAQVARAAG-----ATVLERHDPERRGKGYALD   69 (183)
T ss_pred             CEEeccchHHHHHHHHHHHHhc------CCCCcccEEEEEeCCCCchHHHHHHHcC-----CeEEEeCCCCCCCHHHHHH
Confidence            6999999999999999999887      7777789999999999999999987753     2344444467889999999


Q ss_pred             HHHHhcc-----CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccc-cchhhHH-HH
Q psy7267         174 LGTKCAR-----GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEAL-ANVQRSF-FR  246 (569)
Q Consensus       174 ~Gl~~A~-----gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~-~~~~~~~-~r  246 (569)
                      .|++.+.     +|+++++|+|+.++|+++.++++.+.+.               .+++.|.+.....+ ++..+.. ..
T Consensus        70 ~g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~~---------------~~~v~g~~~~~~~~~~~~~~~~~~~  134 (183)
T cd06438          70 FGFRHLLNLADDPDAVVVFDADNLVDPNALEELNARFAAG---------------ARVVQAYYNSKNPDDSWITRLYAFA  134 (183)
T ss_pred             HHHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhhC---------------CCeeEEEEeeeCCccCHHHHHHHHH
Confidence            9999874     9999999999999999999999999762               36777766543322 2211111 00


Q ss_pred             HHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHH
Q psy7267         247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVEL  298 (569)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL  298 (569)
                      ...........+...+..... .++..+|||+++++.  ++......+|+||
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~-~G~~~~~rr~~l~~~--g~~~~~l~ED~~~  183 (183)
T cd06438         135 FLVFNRLRPLGRSNLGLSCQL-GGTGMCFPWAVLRQA--PWAAHSLTEDLEF  183 (183)
T ss_pred             HHHHHHHHHHHHHHcCCCeee-cCchhhhHHHHHHhC--CCCCCCcccccCC
Confidence            100111111111112212222 334458999999994  6666667788774

The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan

Probab=99.87  E-value=2.1e-20  Score=189.64  Aligned_cols=230  Identities=13%  Similarity=0.070  Sum_probs=156.0

Q ss_pred             EEEEEeecCCCCC-hHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHH----HHHHHhHhhC-CCeEEEEEcCCC
Q psy7267          92 LSVIVPAYNEQDR-LKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQ----VVHQYTEKCG-EDIVRGLKLLKN  165 (569)
Q Consensus        92 VSVIIP~yNE~~~-I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~e----il~~~~~~~~-~~~V~vi~~~~n  165 (569)
                      |||+||+|||+.. +.++|+++.+.+..+  +| +.++||+|+||+++++...    .++++.++++ ..++++++.++|
T Consensus         1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~--~~-~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~   77 (254)
T cd04191           1 TAIVMPVYNEDPARVFAGLRAMYESLAKT--GL-ADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRREN   77 (254)
T ss_pred             CEEEEeCCCCCHHHHHHHHHHHHHHHHhc--CC-cCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCC
Confidence            6999999999987 888888888765543  33 2379999999987765432    2233444443 267888998888


Q ss_pred             CC-hHHHHHHHHHh--ccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhh
Q psy7267         166 RG-KGGAVTLGTKC--ARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQR  242 (569)
Q Consensus       166 ~G-ka~AlN~Gl~~--A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~  242 (569)
                      .| |++++|.+++.  +++|+|+++|||..++|++|.++++.+.++             +++++|++.....+.+++..+
T Consensus        78 ~g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~-------------~~vg~vq~~~~~~n~~~~~~~  144 (254)
T cd04191          78 TGRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEAN-------------PRAGIIQTAPKLIGAETLFAR  144 (254)
T ss_pred             CCccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhC-------------CCEEEEeCCceeECCCCHHHH
Confidence            77 88999999987  788999999999999999999999999864             577888776554444443222


Q ss_pred             HHHHHHhhhhhh-hHhh--hcccccccccccceeeEeHHHHHHH--h------ccccCCchhhchHHHHHHHHcCCCEEE
Q psy7267         243 SFFRNILMKGFH-FIVW--FTGVRTIRDTQCGFKLFTRKSALQL--F------SSIHVQRWAFDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       243 ~~~r~~~~~~~~-~l~~--~~~~~~i~d~~~gf~lfrR~al~~I--~------~~~~~e~~~~D~EL~~Ra~~~G~rI~~  311 (569)
                      ..  .+....+. .+..  .....+.....|...++||++++++  +      +++..+...+|+++..++..+||++.+
T Consensus       145 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~  222 (254)
T cd04191         145 LQ--QFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRL  222 (254)
T ss_pred             HH--HHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEE
Confidence            11  11111110 0000  0000111222344579999999985  1      122234567899999999999999999


Q ss_pred             EEEEE---EEecCCccchhHHHHHHHHHHHHHHHHhcchhhH
Q psy7267         312 VSVNW---TEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWK  350 (569)
Q Consensus       312 vPv~~---~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~  350 (569)
                      .|...   .+.+.+.           ..+++++.||..|.++
T Consensus       223 ~~~~~~~~~~~p~~~-----------~~~~~qr~RW~~G~~q  253 (254)
T cd04191         223 APDLEGSYEECPPTL-----------IDFLKRDRRWCQGNLQ  253 (254)
T ss_pred             ccCCcceEeECCCCH-----------HHHHHHHHHHHhhcCc
Confidence            98643   2223333           6778899999888753

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.87  E-value=5.5e-21  Score=184.37  Aligned_cols=166  Identities=22%  Similarity=0.201  Sum_probs=136.2

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+||+++.|+++|+|+++|      ++|  ..|||||||||+|+|.++++++.+.+   +++++..++|.|.+.++|
T Consensus         1 viI~~~n~~~~l~~~l~sl~~q------~~~--~~eiiivD~~s~d~t~~~~~~~~~~~---~i~~~~~~~n~g~~~~~n   69 (202)
T cd04185           1 AVVVTYNRLDLLKECLDALLAQ------TRP--PDHIIVIDNASTDGTAEWLTSLGDLD---NIVYLRLPENLGGAGGFY   69 (202)
T ss_pred             CEEEeeCCHHHHHHHHHHHHhc------cCC--CceEEEEECCCCcchHHHHHHhcCCC---ceEEEECccccchhhHHH
Confidence            6999999999999999999887      555  57999999999999999999987654   388899999999999999


Q ss_pred             HHHHhc---cCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhh
Q psy7267         174 LGTKCA---RGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILM  250 (569)
Q Consensus       174 ~Gl~~A---~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~  250 (569)
                      .|++.+   ++|+++++|+|+.++|++++++++.+++              ++.+++.+.+...+.              
T Consensus        70 ~~~~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~--------------~~~~~~~~~~~~~~~--------------  121 (202)
T cd04185          70 EGVRRAYELGYDWIWLMDDDAIPDPDALEKLLAYADK--------------DNPQFLAPLVLDPDG--------------  121 (202)
T ss_pred             HHHHHHhccCCCEEEEeCCCCCcChHHHHHHHHHHhc--------------CCceEecceeEcCCC--------------
Confidence            999876   6899999999999999999999999984              456777766543221              


Q ss_pred             hhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCc---hhhchHHHHHHHHcCCCEEEEEEEEEEe
Q psy7267         251 KGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQR---WAFDVELLFIAEVLHIPMAEVSVNWTEI  319 (569)
Q Consensus       251 ~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~---~~~D~EL~~Ra~~~G~rI~~vPv~~~~~  319 (569)
                                        ..+..+++|++++++  +...+.   +.+|.|++.|+.++|+++ ++|.....+
T Consensus       122 ------------------~~~~~~~~~~~~~~~--g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h  172 (202)
T cd04185         122 ------------------SFVGVLISRRVVEKI--GLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVH  172 (202)
T ss_pred             ------------------ceEEEEEeHHHHHHh--CCCChhhhccchHHHHHHHHHHcCCcE-EecceEEEE
Confidence                              112358999999998  444433   456999999999999999 887544433

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=99.86  E-value=5.1e-20  Score=210.22  Aligned_cols=240  Identities=14%  Similarity=0.046  Sum_probs=159.6

Q ss_pred             CCCCCCCCccEEEEEeecCCCCChHHHHHHHHH-HHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEE
Q psy7267          82 PSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIE-FLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGL  160 (569)
Q Consensus        82 p~~~~~~~p~VSVIIP~yNE~~~I~~~L~sll~-~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi  160 (569)
                      +.+.....|+|||+||+|||+.+++++++++++ +      +||  ++||++++|+++|+|.++++++.+++  ++++++
T Consensus        55 ~~l~~~~~~~vsIlVPa~nE~~vi~~~i~~ll~~l------dYP--~~eI~vi~~~nD~~T~~~~~~l~~~~--p~~~~v  124 (727)
T PRK11234         55 RELYKPDEKPLAIMVPAWNETGVIGNMAELAATTL------DYE--NYHIFVGTYPNDPATQADVDAVCARF--PNVHKV  124 (727)
T ss_pred             hhcccCCCCCEEEEEecCcchhhHHHHHHHHHHhC------CCC--CeEEEEEecCCChhHHHHHHHHHHHC--CCcEEE
Confidence            334455668899999999999999999999874 3      888  59999999999999999999999988  556655


Q ss_pred             EcCC--CCChHHHHHHHHHhc---------cCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEe
Q psy7267         161 KLLK--NRGKGGAVTLGTKCA---------RGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVG  229 (569)
Q Consensus       161 ~~~~--n~Gka~AlN~Gl~~A---------~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G  229 (569)
                      ..++  |.||+.|+|.|++.+         +.+++++.|||+.++|+.|+ +++.+.+              +. ++|++
T Consensus       125 ~~~~~g~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l~~--------------~~-~~VQ~  188 (727)
T PRK11234        125 VCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYLVE--------------RK-DLIQI  188 (727)
T ss_pred             EeCCCCCCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhhcC--------------CC-CeEee
Confidence            4444  789999999999987         34678889999999999998 5566654              22 66666


Q ss_pred             eeeecccc--cchhhHHHHHHhhhhhh-hHhhhcccccccccccceeeE-eH--HHHHHHhc--cccCCchhhchHHHHH
Q psy7267         230 SRAHLEAL--ANVQRSFFRNILMKGFH-FIVWFTGVRTIRDTQCGFKLF-TR--KSALQLFS--SIHVQRWAFDVELLFI  301 (569)
Q Consensus       230 ~r~~~~~~--~~~~~~~~r~~~~~~~~-~l~~~~~~~~i~d~~~gf~lf-rR--~al~~I~~--~~~~e~~~~D~EL~~R  301 (569)
                      .....+..  ......+...+...... ...+...+..+ ...|...+| ||  +++.++-+  .+..+..++|+|+..|
T Consensus       189 p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~-~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~r  267 (727)
T PRK11234        189 PVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQV-PSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFR  267 (727)
T ss_pred             cccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCc-ccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHH
Confidence            54322111  11111111122111111 11222222222 233334577 55  45667622  2556788899999999


Q ss_pred             HHHcCCCEEEEEEEEEE-------e-cC-Cc-----cchhHHHHHHHHHHHHHHHHhcchh
Q psy7267         302 AEVLHIPMAEVSVNWTE-------I-EG-SK-----IVPVFSWIQMGWDVLNIWLHYTLGL  348 (569)
Q Consensus       302 a~~~G~rI~~vPv~~~~-------~-~G-S~-----~~~~~~~~~~~~~~l~~r~ry~~g~  348 (569)
                      +..+|+++.+.|.....       + .| +.     ...+......++...+||.||..|.
T Consensus       268 L~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~  328 (727)
T PRK11234        268 LKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGI  328 (727)
T ss_pred             HHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHccc
Confidence            99999999998843321       0 11 10     1122233456688888999998886

>PRK10018 putative glycosyl transferase; Provisional

Probab=99.86  E-value=2.3e-20  Score=191.87  Aligned_cols=110  Identities=19%  Similarity=0.225  Sum_probs=98.0

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      .|.||||||+||+++.|.++|+|+++|      .||  ++|||||||||+|  .++++++.+++.+++++++++++|.|.
T Consensus         4 ~p~VSVIip~yN~~~~l~~~l~Svl~Q------t~~--~~EiIVVDDgS~~--~~~~~~~~~~~~~~ri~~i~~~~n~G~   73 (279)
T PRK10018          4 NPLISIYMPTWNRQQLAIRAIKSVLRQ------DYS--NWEMIIVDDCSTS--WEQLQQYVTALNDPRITYIHNDINSGA   73 (279)
T ss_pred             CCEEEEEEEeCCCHHHHHHHHHHHHhC------CCC--CeEEEEEECCCCC--HHHHHHHHHHcCCCCEEEEECCCCCCH
Confidence            577999999999999999999999998      555  7899999999995  456666665544478999999999999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      +.|+|.|++.|+||||+++|+|+.+.|+.|+.+++.+.+.
T Consensus        74 ~~a~N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~  113 (279)
T PRK10018         74 CAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQL  113 (279)
T ss_pred             HHHHHHHHHHcCCCEEEEECCCCCCCccHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999988764

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.86  E-value=1.9e-21  Score=178.16  Aligned_cols=167  Identities=29%  Similarity=0.355  Sum_probs=121.0

Q ss_pred             EEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHH
Q psy7267          93 SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAV  172 (569)
Q Consensus        93 SVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~Al  172 (569)
                      |||||+||+++.|.++|+|+++|..      +  .+||+||||||+|+|.++++++.+..  .+++++++++|.|++.|+
T Consensus         1 Svvip~~n~~~~l~~~l~sl~~q~~------~--~~eiivvdd~s~d~~~~~~~~~~~~~--~~i~~i~~~~n~g~~~~~   70 (169)
T PF00535_consen    1 SVVIPTYNEAEYLERTLESLLKQTD------P--DFEIIVVDDGSTDETEEILEEYAESD--PNIRYIRNPENLGFSAAR   70 (169)
T ss_dssp             EEEEEESS-TTTHHHHHHHHHHHSG------C--EEEEEEEECS-SSSHHHHHHHHHCCS--TTEEEEEHCCCSHHHHHH
T ss_pred             CEEEEeeCCHHHHHHHHHHHhhccC------C--CEEEEEeccccccccccccccccccc--cccccccccccccccccc
Confidence            7999999999999999999999822      2  78999999999999999999987633  789999999999999999


Q ss_pred             HHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHH-HHhhh
Q psy7267         173 TLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR-NILMK  251 (569)
Q Consensus       173 N~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r-~~~~~  251 (569)
                      |.|+++|+++|++++|+|+.+.|++++++++.+++.              +.+++.+................. .....
T Consensus        71 n~~~~~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (169)
T PF00535_consen   71 NRGIKHAKGEYILFLDDDDIISPDWLEELVEALEKN--------------PPDVVIGSVIYIDDDNRYPDRRLRFSFWNR  136 (169)
T ss_dssp             HHHHHH--SSEEEEEETTEEE-TTHHHHHHHHHHHC--------------TTEEEEEEEEEEECTTETEECCCTSEEEEC
T ss_pred             cccccccceeEEEEeCCCceEcHHHHHHHHHHHHhC--------------CCcEEEEEEEEecCCccccccccchhhhhh
Confidence            999999999999999999999999999999999983              457777766544322211111100 00011


Q ss_pred             hhhhHhhhcccccccccccceeeEeHHHHHHH
Q psy7267         252 GFHFIVWFTGVRTIRDTQCGFKLFTRKSALQL  283 (569)
Q Consensus       252 ~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I  283 (569)
                      ..................+++.++||++++++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~  168 (169)
T PF00535_consen  137 FERKIFNNIRFWKISFFIGSCALFRRSVFEEI  168 (169)
T ss_dssp             CHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred             hhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence            11111112222234445557789999999986

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=99.85  E-value=2.1e-20  Score=176.62  Aligned_cols=168  Identities=19%  Similarity=0.231  Sum_probs=127.0

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+||+++.|+++|+++.+|      +|+  ++||+||||+|+|+|.++++++.+..+...+.+.+.+.+.|++.++|
T Consensus         1 ivip~~n~~~~l~~~l~sl~~q------~~~--~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n   72 (182)
T cd06420           1 LIITTYNRPEALELVLKSVLNQ------SIL--PFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRN   72 (182)
T ss_pred             CEEeecCChHHHHHHHHHHHhc------cCC--CCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHH
Confidence            6999999999999999999987      333  68999999999999999999887654323344445445568999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGF  253 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~  253 (569)
                      .|++.|++|||+++|+|+.++|++++++++.+..               + ..+.|.+.........             
T Consensus        73 ~g~~~a~g~~i~~lD~D~~~~~~~l~~~~~~~~~---------------~-~~v~g~~~~~~~~~~~-------------  123 (182)
T cd06420          73 KAIAAAKGDYLIFIDGDCIPHPDFIADHIELAEP---------------G-VFLSGSRVLLNEKLTE-------------  123 (182)
T ss_pred             HHHHHhcCCEEEEEcCCcccCHHHHHHHHHHhCC---------------C-cEEecceeecccccce-------------
Confidence            9999999999999999999999999999988732               2 3555665543322110             


Q ss_pred             hhHhhhcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcCCCEEEE
Q psy7267         254 HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       254 ~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G~rI~~v  312 (569)
                                  ....++..+++|+.+.++  +.+++.+    .+|+|++.|+.++|++...+
T Consensus       124 ------------~~~~~~~~~~~r~~~~~~--ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~  172 (182)
T cd06420         124 ------------RGIRGCNMSFWKKDLLAV--NGFDEEFTGWGGEDSELVARLLNSGIKFRKL  172 (182)
T ss_pred             ------------eEeccceEEEEHHHHHHh--CCCCcccccCCcchHHHHHHHHHcCCcEEEe
Confidence                        112234557888888887  4444332    46999999999999776655

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=99.85  E-value=1.3e-20  Score=185.75  Aligned_cols=193  Identities=17%  Similarity=0.091  Sum_probs=129.5

Q ss_pred             EEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHH
Q psy7267          94 VIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAV  172 (569)
Q Consensus        94 VIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~Al  172 (569)
                      +|||+||++ +.|.++|+|+++|           ..|||||||+|+|.+.+..+.   ..  .+++++..++|.|++.|+
T Consensus         1 ~vI~~yn~~~~~l~~~l~sl~~q-----------~~~iivvDn~s~~~~~~~~~~---~~--~~i~~i~~~~n~G~~~a~   64 (237)
T cd02526           1 AVVVTYNPDLSKLKELLAALAEQ-----------VDKVVVVDNSSGNDIELRLRL---NS--EKIELIHLGENLGIAKAL   64 (237)
T ss_pred             CEEEEecCCHHHHHHHHHHHhcc-----------CCEEEEEeCCCCccHHHHhhc---cC--CcEEEEECCCceehHHhh
Confidence            589999999 9999999999886           459999999999887665443   22  679999999999999999


Q ss_pred             HHHHHhccC---cEEEEEcCCCCCChhhHHHHH---HHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHH
Q psy7267         173 TLGTKCARG---SIILFADADGATKFADLEKLE---DKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR  246 (569)
Q Consensus       173 N~Gl~~A~g---d~Vv~lDaD~~~~pd~L~~lv---~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r  246 (569)
                      |.|++.|++   |||+++|+|+.++|++|++++   ..+.+.             +... ++|........... ... .
T Consensus        65 N~g~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~-------------~~~~-~~~~~~~~~~~~~~-~~~-~  128 (237)
T cd02526          65 NIGIKAALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKN-------------SNIG-AVGPRIIDRRTGEN-SPG-V  128 (237)
T ss_pred             hHHHHHHHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccC-------------CCeE-EEeeeEEcCCCCee-ccc-e
Confidence            999999987   999999999999999999996   333332             2222 23333221111100 000 0


Q ss_pred             HHhhhhhhhHhhhcc-cccccccccceeeEeHHHHHHHhccccCCch---hhchHHHHHHHHcCCCEEEEEEEEEEec
Q psy7267         247 NILMKGFHFIVWFTG-VRTIRDTQCGFKLFTRKSALQLFSSIHVQRW---AFDVELLFIAEVLHIPMAEVSVNWTEIE  320 (569)
Q Consensus       247 ~~~~~~~~~l~~~~~-~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~---~~D~EL~~Ra~~~G~rI~~vPv~~~~~~  320 (569)
                      ............... ........++..++||++++++  +.+++.+   .+|+|++.|+.+.|+++.++|.....+.
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~--ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~  204 (237)
T cd02526         129 RKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKV--GGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHE  204 (237)
T ss_pred             eccCccceecccccCCceEeeeeeccceEEcHHHHHHh--CCCCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEec
Confidence            000000000000000 0111112234468999999999  5555554   4599999999999999999986544443

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PRK05454 glucosyltransferase MdoH; Provisional

Probab=99.85  E-value=2.6e-19  Score=203.45  Aligned_cols=235  Identities=13%  Similarity=0.062  Sum_probs=157.9

Q ss_pred             CCCCccEEEEEeecCCCC-----ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHH----HHHHhHhhC-CC
Q psy7267          86 DEPSVNLSVIVPAYNEQD-----RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQV----VHQYTEKCG-ED  155 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~-----~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~ei----l~~~~~~~~-~~  155 (569)
                      .+..|+|+|+||+|||+.     .|+++++|+.++      +|+ +++||+|+||+++|++...    .+++.++++ ..
T Consensus       120 ~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~------~~~-~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~  192 (691)
T PRK05454        120 PPPEARTAILMPIYNEDPARVFAGLRAMYESLAAT------GHG-AHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEG  192 (691)
T ss_pred             CCCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhc------CCC-CCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCC
Confidence            345688999999999995     356666666554      554 3799999999999987543    345555553 25


Q ss_pred             eEEEEEcCCCCC-hHHHHHHHHHh--ccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeee
Q psy7267         156 IVRGLKLLKNRG-KGGAVTLGTKC--ARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRA  232 (569)
Q Consensus       156 ~V~vi~~~~n~G-ka~AlN~Gl~~--A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~  232 (569)
                      ++.+.+..+|.| |++++|.+++.  +++||++++|||..+++|++.+++..++.+             +++++|++...
T Consensus       193 ~i~yr~R~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~d-------------P~vGlVQt~~~  259 (691)
T PRK05454        193 RIFYRRRRRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEAN-------------PRAGLIQTLPV  259 (691)
T ss_pred             cEEEEECCcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhC-------------cCEEEEeCCcc
Confidence            788888777766 89999999998  567999999999999999999999999864             57788887554


Q ss_pred             ecccccchhhHHHHHHhhhhhhhHhhhcc--cc-cccccccceeeEeHHHHHHHh--------ccccCCchhhchHHHHH
Q psy7267         233 HLEALANVQRSFFRNILMKGFHFIVWFTG--VR-TIRDTQCGFKLFTRKSALQLF--------SSIHVQRWAFDVELLFI  301 (569)
Q Consensus       233 ~~~~~~~~~~~~~r~~~~~~~~~l~~~~~--~~-~i~d~~~gf~lfrR~al~~I~--------~~~~~e~~~~D~EL~~R  301 (569)
                      ..+.++...+..  .+.+..+..+.....  .. +.....|...++||+++.++.        +.+..+...+|+++..+
T Consensus       260 ~~n~~slfaR~q--qf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~  337 (691)
T PRK05454        260 AVGADTLFARLQ--QFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAAL  337 (691)
T ss_pred             CcCCCCHHHHHH--HHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHH
Confidence            444443322211  111111111100000  00 111122344689999999872        11223556789999999


Q ss_pred             HHHcCCCEEEEEE---EEEEecCCccchhHHHHHHHHHHHHHHHHhcchhhHHHH
Q psy7267         302 AEVLHIPMAEVSV---NWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIKA  353 (569)
Q Consensus       302 a~~~G~rI~~vPv---~~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~~  353 (569)
                      ++++||++.++|.   .|.+.+.+-           ...++++.||..|.++...
T Consensus       338 l~~~GyrV~~~pd~~~~~ee~P~tl-----------~~~~~qr~RW~~G~lQ~l~  381 (691)
T PRK05454        338 MRRAGWGVWLAPDLPGSYEELPPNL-----------LDELKRDRRWCQGNLQHLR  381 (691)
T ss_pred             HHHCCCEEEEcCccccccccCCCCH-----------HHHHHHHHHHHhchHHHHH
Confidence            9999999999986   244433333           5666777777777766543

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=99.84  E-value=4.5e-20  Score=170.16  Aligned_cols=159  Identities=23%  Similarity=0.297  Sum_probs=133.3

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+||+.+.+.++++++.++      .++  .+||+|+||||+|++.+.+++..     .+++++..++|.|++.|+|
T Consensus         1 vii~~~~~~~~l~~~l~sl~~~------~~~--~~~iiivdd~s~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~a~n   67 (166)
T cd04186           1 IIIVNYNSLEYLKACLDSLLAQ------TYP--DFEVIVVDNASTDGSVELLRELF-----PEVRLIRNGENLGFGAGNN   67 (166)
T ss_pred             CEEEecCCHHHHHHHHHHHHhc------cCC--CeEEEEEECCCCchHHHHHHHhC-----CCeEEEecCCCcChHHHhh
Confidence            6899999999999999999887      332  78999999999999999887753     3588888889999999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGF  253 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~  253 (569)
                      .|++.+++|+++++|+|+.++|+++.++++.+.+.             ++.+++.+.                       
T Consensus        68 ~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~-----------------------  111 (166)
T cd04186          68 QGIREAKGDYVLLLNPDTVVEPGALLELLDAAEQD-------------PDVGIVGPK-----------------------  111 (166)
T ss_pred             HHHhhCCCCEEEEECCCcEECccHHHHHHHHHHhC-------------CCceEEEcc-----------------------
Confidence            99999999999999999999999999999988774             344454433                       


Q ss_pred             hhHhhhcccccccccccceeeEeHHHHHHHhccccCCc---hhhchHHHHHHHHcCCCEEEEEEEEE
Q psy7267         254 HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQR---WAFDVELLFIAEVLHIPMAEVSVNWT  317 (569)
Q Consensus       254 ~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~---~~~D~EL~~Ra~~~G~rI~~vPv~~~  317 (569)
                                    ..+++.+++|++++++  +..++.   +.+|.++..|+.+.|+++..+|....
T Consensus       112 --------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~  162 (166)
T cd04186         112 --------------VSGAFLLVRREVFEEV--GGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVI  162 (166)
T ss_pred             --------------CceeeEeeeHHHHHHc--CCCChhhhccccHHHHHHHHHHcCCeEEEccceEE
Confidence                          3457789999999998  444433   45699999999999999999986543

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

Probab=99.84  E-value=2.5e-19  Score=174.54  Aligned_cols=178  Identities=21%  Similarity=0.128  Sum_probs=124.2

Q ss_pred             EEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHH
Q psy7267          92 LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGA  171 (569)
Q Consensus        92 VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~A  171 (569)
                      ||||||+||+++.|.++|+++++|      .|+  ++||+||||+|+|+|.+++++       .+++++.  .+.|++.|
T Consensus         1 vsvii~~~n~~~~l~~~l~sl~~q------~~~--~~evivvdd~s~d~~~~~~~~-------~~~~~~~--~~~g~~~a   63 (221)
T cd02522           1 LSIIIPTLNEAENLPRLLASLRRL------NPL--PLEIIVVDGGSTDGTVAIARS-------AGVVVIS--SPKGRARQ   63 (221)
T ss_pred             CEEEEEccCcHHHHHHHHHHHHhc------cCC--CcEEEEEeCCCCccHHHHHhc-------CCeEEEe--CCcCHHHH
Confidence            589999999999999999999887      332  789999999999999998876       3455554  46799999


Q ss_pred             HHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhh
Q psy7267         172 VTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMK  251 (569)
Q Consensus       172 lN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~  251 (569)
                      +|.|++.|++|+|+++|+|+.++|+++++++..+.+.              +..++.... ...........    ....
T Consensus        64 ~n~g~~~a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~--------------~~~~~~~~~-~~~~~~~~~~~----~~~~  124 (221)
T cd02522          64 MNAGAAAARGDWLLFLHADTRLPPDWDAAIIETLRAD--------------GAVAGAFRL-RFDDPGPRLRL----LELG  124 (221)
T ss_pred             HHHHHHhccCCEEEEEcCCCCCChhHHHHHHHHhhcC--------------CcEEEEEEe-eecCCccchhh----hhhc
Confidence            9999999999999999999999999999997766552              222222222 22222211110    0000


Q ss_pred             hhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCEEE
Q psy7267         252 GFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       252 ~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI~~  311 (569)
                       . ........   ........+++|++++++ +++....+.+|+|++.|+.+.|+++..
T Consensus       125 -~-~~~~~~~~---~~~~~~~~~~r~~~~~~~-G~fd~~~~~ED~d~~~r~~~~G~~~~~  178 (221)
T cd02522         125 -A-NLRSRLFG---LPYGDQGLFIRRELFEEL-GGFPELPLMEDVELVRRLRRRGRPALL  178 (221)
T ss_pred             -c-cceecccC---CCcCCceEEEEHHHHHHh-CCCCccccccHHHHHHHHHhCCCEEEc
Confidence             0 00000011   111223568999999998 233333356799999999999998765

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine

Probab=99.83  E-value=1e-19  Score=175.74  Aligned_cols=162  Identities=19%  Similarity=0.140  Sum_probs=111.9

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC---CCCChHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL---KNRGKGG  170 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~---~n~Gka~  170 (569)
                      ||||+|||++.|+++|+++.++      + |  ++||+||||||+|+|.++++ +....  +++++++..   .|.||+.
T Consensus         1 ViIp~~Ne~~~l~~~l~sl~~~------~-~--~~eIivvdd~S~D~t~~~~~-~~~~~--~~v~~i~~~~~~~~~Gk~~   68 (191)
T cd06436           1 VLVPCLNEEAVIQRTLASLLRN------K-P--NFLVLVIDDASDDDTAGIVR-LAITD--SRVHLLRRHLPNARTGKGD   68 (191)
T ss_pred             CEEeccccHHHHHHHHHHHHhC------C-C--CeEEEEEECCCCcCHHHHHh-heecC--CcEEEEeccCCcCCCCHHH
Confidence            6999999999999999999886      3 2  68999999999999999998 33333  578888753   5789999


Q ss_pred             HHHHHHHhcc-----------CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccc-c
Q psy7267         171 AVTLGTKCAR-----------GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEAL-A  238 (569)
Q Consensus       171 AlN~Gl~~A~-----------gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~-~  238 (569)
                      |+|.|++.++           +|+|+++|+|+.++|++++++...+.+              ++++.+.+.....+.. .
T Consensus        69 aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~~~--------------~~v~~v~~~~~~~~~~~~  134 (191)
T cd06436          69 ALNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYFSD--------------PRVAGTQSRVRMYNRHKN  134 (191)
T ss_pred             HHHHHHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhhcC--------------CceEEEeeeEEEecCCCC
Confidence            9999999875           379999999999999999998887764              4556666554333322 2


Q ss_pred             chhhHHHHHHhhhh-hhhHhhhcccccccccccceeeEeHHHHHHH
Q psy7267         239 NVQRSFFRNILMKG-FHFIVWFTGVRTIRDTQCGFKLFTRKSALQL  283 (569)
Q Consensus       239 ~~~~~~~r~~~~~~-~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I  283 (569)
                      +..+...-.+.... .....+...+ . ....+...+|||++++++
T Consensus       135 ~~~~~~~~e~~~~~~~~~~~~~~~~-~-~~~~G~~~~~r~~~l~~v  178 (191)
T cd06436         135 LLTILQDLEFFIIIAATQSLRALTG-T-VGLGGNGQFMRLSALDGL  178 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC-c-EEECCeeEEEeHHHHHHh
Confidence            21111111111110 0111111112 1 123445579999999999

N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=99.82  E-value=2.4e-19  Score=183.01  Aligned_cols=191  Identities=18%  Similarity=0.151  Sum_probs=124.8

Q ss_pred             eecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHH
Q psy7267          97 PAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLG  175 (569)
Q Consensus        97 P~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~G  175 (569)
                      .+||.+ +.|.++|+++++|           ..|||||||||+|+  +.++++.+++  ++++++++++|.|.+.|+|.|
T Consensus         1 Vtyn~~~~~l~~~l~sl~~q-----------~~~iiVVDN~S~~~--~~~~~~~~~~--~~i~~i~~~~N~G~a~a~N~G   65 (281)
T TIGR01556         1 VTFNPDLEHLGELITSLPKQ-----------VDRIIAVDNSPHSD--QPLKNARLRG--QKIALIHLGDNQGIAGAQNQG   65 (281)
T ss_pred             CccCccHHHHHHHHHHHHhc-----------CCEEEEEECcCCCc--HhHHHHhccC--CCeEEEECCCCcchHHHHHHH
Confidence            379974 7888999988886           45999999999765  2223333334  689999999999999999999


Q ss_pred             HHhc---cCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhH-HHHHHhhh
Q psy7267         176 TKCA---RGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRS-FFRNILMK  251 (569)
Q Consensus       176 l~~A---~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~-~~r~~~~~  251 (569)
                      ++.|   .+|||+++|+|+.+++++++++++.+++.+            .. ..++|.+.....+...... ........
T Consensus        66 i~~a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (281)
T TIGR01556        66 LDASFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSAEN------------GQ-ACALGPRFFDRGTSRRLPAIHLDGLLLR  132 (281)
T ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHhcC------------Cc-eEEECCeEEcCCCcccCCceeeccccee
Confidence            9998   689999999999999999999999987631            12 2333333211111000000 00000000


Q ss_pred             hhhhHhhhcccccc-cccccceeeEeHHHHHHHhccccCCch---hhchHHHHHHHHcCCCEEEEEEEEEEe
Q psy7267         252 GFHFIVWFTGVRTI-RDTQCGFKLFTRKSALQLFSSIHVQRW---AFDVELLFIAEVLHIPMAEVSVNWTEI  319 (569)
Q Consensus       252 ~~~~l~~~~~~~~i-~d~~~gf~lfrR~al~~I~~~~~~e~~---~~D~EL~~Ra~~~G~rI~~vPv~~~~~  319 (569)
                      ... .......... ...++| .+++|++++++  +.+++++   .+|+|+++|+.++|+++.++|.....|
T Consensus       133 ~~~-~~~~~~~~~~~~~~~sg-~li~~~~~~~i--G~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H  200 (281)
T TIGR01556       133 QIS-LDGLTTPQKTSFLISSG-CLITREVYQRL--GMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEH  200 (281)
T ss_pred             eec-ccccCCceeccEEEcCc-ceeeHHHHHHh--CCccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEE
Confidence            000 0000000011 112233 48999999999  6666654   349999999999999999999544433

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=99.81  E-value=1.9e-18  Score=195.51  Aligned_cols=238  Identities=13%  Similarity=0.134  Sum_probs=156.6

Q ss_pred             CCCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC
Q psy7267          86 DEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN  165 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n  165 (569)
                      ....|.+||+||+|||+++|+++++++++.+     +||  ++||+|+.+..+++|.+.++++...+  ++++++..+++
T Consensus        67 ~~~~~~vsIlVPa~nE~~VI~~~v~~ll~~l-----dYp--~~~I~v~~~~nD~~T~~~~~~~~~~~--p~~~~v~~~~~  137 (703)
T PRK15489         67 ERDEQPLAIMVPAWKEYDVIAKMIENMLATL-----DYR--RYVIFVGTYPNDAETITEVERMRRRY--KRLVRVEVPHD  137 (703)
T ss_pred             ccCCCceEEEEeCCCcHHHHHHHHHHHHhcC-----CCC--CeEEEEEecCCCccHHHHHHHHhccC--CcEEEEEcCCC
Confidence            4456789999999999999999999987431     788  68999965444558888888888777  57777766554


Q ss_pred             --CChHHHHHHHHHhc-------cCc--EEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeee-
Q psy7267         166 --RGKGGAVTLGTKCA-------RGS--IILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAH-  233 (569)
Q Consensus       166 --~Gka~AlN~Gl~~A-------~gd--~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~-  233 (569)
                        .||+.|+|.|++.+       .++  .|++.|||+.++|+.|..+ +.+...               .+++++.... 
T Consensus       138 gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~-~~~~~~---------------~~~iQ~pV~~~  201 (703)
T PRK15489        138 GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYF-NYLLPR---------------KDLVQLPVLSL  201 (703)
T ss_pred             CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHH-HhhcCC---------------cceeeeeeccC
Confidence              78999999999986       333  4999999999999999876 444331               2566653221 


Q ss_pred             -cccccchhhHHHHHHhhhhhh-hHhhhcccccccccccceeeEeHHHHHHHhc-----cccCCchhhchHHHHHHHHcC
Q psy7267         234 -LEALANVQRSFFRNILMKGFH-FIVWFTGVRTIRDTQCGFKLFTRKSALQLFS-----SIHVQRWAFDVELLFIAEVLH  306 (569)
Q Consensus       234 -~~~~~~~~~~~~r~~~~~~~~-~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~-----~~~~e~~~~D~EL~~Ra~~~G  306 (569)
                       .+.+++..+.+.-.+...+.. ...+...+..+. .+|...+|||++++++..     .+..+..+||+|+.+|+.+.|
T Consensus       202 ~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ip-l~Gv~~~frr~aL~~l~~~gg~~~~n~~sLTED~Dlg~RL~~~G  280 (703)
T PRK15489        202 ERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVP-SAGVGTCFSRRALLALMKERGNQPFNTSSLTEDYDFSFRLAELG  280 (703)
T ss_pred             CCccccHHHHHHHHHHHHHhhhHHHHHHHcCCcee-ccCcceeeeHHHHHHHHHhcCCCCCCCCCchHhHHHHHHHHHCC
Confidence             223344444333333332221 112212222332 233345899999998721     234467789999999999999


Q ss_pred             CCEEEE--EEEEEEec------------CCccchhHHHHHHHHHHHHHHHHhcchhh
Q psy7267         307 IPMAEV--SVNWTEIE------------GSKIVPVFSWIQMGWDVLNIWLHYTLGLW  349 (569)
Q Consensus       307 ~rI~~v--Pv~~~~~~------------GS~~~~~~~~~~~~~~~l~~r~ry~~g~w  349 (569)
                      ++..+.  |+.+..+.            +..+.........++...+|+.||..|+.
T Consensus       281 ~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~  337 (703)
T PRK15489        281 MQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIA  337 (703)
T ss_pred             CceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHH
Confidence            998884  55432211            11222233445666778888888887753

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=99.81  E-value=9.1e-20  Score=166.99  Aligned_cols=168  Identities=24%  Similarity=0.280  Sum_probs=119.0

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ||||+||+++.|.++|+++++|      .++  ++||+||||+|+|+|.+.++++....+ ..+.++...+|.|++.|+|
T Consensus         1 Viip~~n~~~~l~~~l~sl~~q------~~~--~~~iivvdd~s~d~t~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~n   71 (180)
T cd06423           1 IIVPAYNEEAVIERTIESLLAL------DYP--KLEVIVVDDGSTDDTLEILEELAALYI-RRVLVVRDKENGGKAGALN   71 (180)
T ss_pred             CeecccChHHHHHHHHHHHHhC------CCC--ceEEEEEeCCCccchHHHHHHHhcccc-ceEEEEEecccCCchHHHH
Confidence            6899999999999999999987      332  789999999999999999998766542 3466777789999999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccc-cchhhHHHHHHhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEAL-ANVQRSFFRNILMKG  252 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~-~~~~~~~~r~~~~~~  252 (569)
                      .|++.+++|+++++|+|+.++|+++++++..+...             ++.+++.|........ ...............
T Consensus        72 ~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (180)
T cd06423          72 AGLRHAKGDIVVVLDADTILEPDALKRLVVPFFAD-------------PKVGAVQGRVRVRNGSENLLTRLQAIEYLSIF  138 (180)
T ss_pred             HHHHhcCCCEEEEECCCCCcChHHHHHHHHHhccC-------------CCeeeEeeeEEEecCcCcceeccchheeccee
Confidence            99999999999999999999999999997776654             4566777666543332 111110000000000


Q ss_pred             hhhHhhhcccccccccccceeeEeHHHHHHH
Q psy7267         253 FHFIVWFTGVRTIRDTQCGFKLFTRKSALQL  283 (569)
Q Consensus       253 ~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I  283 (569)
                      .................+++.++||++++++
T Consensus       139 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  169 (180)
T cd06423         139 RLGRRAQSALGGVLVLSGAFGAFRREALREV  169 (180)
T ss_pred             eeeeehhheecceeecCchHHHHHHHHHHHh
Confidence            0000000011122344556789999999998

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=99.80  E-value=7e-19  Score=182.66  Aligned_cols=212  Identities=17%  Similarity=0.089  Sum_probs=145.2

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      +|++++||++||..+.+.+||+++.++      .|+  ..+|++|||+|+|+|.+.+++..  +  ++++++.+++|.|.
T Consensus         2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~------~~~--~~~iv~vDn~s~d~~~~~~~~~~--~--~~v~~i~~~~NlG~   69 (305)
T COG1216           2 MPKISIIIVTYNRGEDLVECLASLAAQ------TYP--DDVIVVVDNGSTDGSLEALKARF--F--PNVRLIENGENLGF   69 (305)
T ss_pred             CcceEEEEEecCCHHHHHHHHHHHhcC------CCC--CcEEEEccCCCCCCCHHHHHhhc--C--CcEEEEEcCCCccc
Confidence            477999999999999999999999987      444  44666899999999999988742  3  78999999999999


Q ss_pred             HHHHHHHHHhccCc---EEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHH
Q psy7267         169 GGAVTLGTKCARGS---IILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFF  245 (569)
Q Consensus       169 a~AlN~Gl~~A~gd---~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~  245 (569)
                      +++.|.|++.|.++   |++++|.|..++|++|+++++.+++.+...++|......++..-.-......  ..    ...
T Consensus        70 agg~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~----~~~  143 (305)
T COG1216          70 AGGFNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGES--DG----LTG  143 (305)
T ss_pred             hhhhhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheecccc--cc----ccc
Confidence            99999999999654   9999999999999999999999999644333333211111000000000000  00    000


Q ss_pred             HHHhhhhhhhHhhhccccccc-ccccceeeEeHHHHHHHhccccCCchh---hchHHHHHHHHcCCCEEEEEEEEEEec
Q psy7267         246 RNILMKGFHFIVWFTGVRTIR-DTQCGFKLFTRKSALQLFSSIHVQRWA---FDVELLFIAEVLHIPMAEVSVNWTEIE  320 (569)
Q Consensus       246 r~~~~~~~~~l~~~~~~~~i~-d~~~gf~lfrR~al~~I~~~~~~e~~~---~D~EL~~Ra~~~G~rI~~vPv~~~~~~  320 (569)
                      ..................... ...+++.+++|++++++  +..+++++   +|+|++.|++++|+++..+|.....|.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~li~~~~~~~v--G~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~  220 (305)
T COG1216         144 GWRASPLLEIAPDLSSYLEVVASLSGACLLIRREAFEKV--GGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAIIYHK  220 (305)
T ss_pred             cceecccccccccccchhhhhhhcceeeeEEcHHHHHHh--CCCCcccceeehHHHHHHHHHHcCCeEEEeeccEEEEe
Confidence            000000000000000001111 24567789999999999  66666654   499999999999999999996554443

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]

Probab=99.77  E-value=2e-17  Score=170.03  Aligned_cols=202  Identities=22%  Similarity=0.288  Sum_probs=134.0

Q ss_pred             EEEEeecCCCCC--hHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC---CC
Q psy7267          93 SVIVPAYNEQDR--LKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN---RG  167 (569)
Q Consensus        93 SVIIP~yNE~~~--I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n---~G  167 (569)
                      |||||++|+...  |.+.|.+++..+....   +..++|||||||||++.+.+.++++.++.  ...+++....+   .|
T Consensus         1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~---~~~~~eiIvvd~~s~~~~~~~l~~~~~~~--~~~~~i~~~~~~~~f~   75 (281)
T PF10111_consen    1 SIIIPVRNRSERPDILERLRNCLESLSQFQ---SDPDFEIIVVDDGSSDEFDEELKKLCEKN--GFIRYIRHEDNGEPFS   75 (281)
T ss_pred             CEEEEecCCccchHHHHHHHHHHHHHHhcC---CCCCEEEEEEECCCchhHHHHHHHHHhcc--CceEEEEcCCCCCCcC
Confidence            799999999965  5566666666655421   23489999999999999888888877765  33435555543   59


Q ss_pred             hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHH---HHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHH
Q psy7267         168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLED---KLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSF  244 (569)
Q Consensus       168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~---~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~  244 (569)
                      ++.|+|.|++.|++|+|+++|+|+.++|+.++++++   .+...             +..-++..... ..+....  ..
T Consensus        76 ~a~arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~-------------~~~~~~~p~~y-l~~~~~~--~~  139 (281)
T PF10111_consen   76 RAKARNIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKN-------------PNAFLVYPCLY-LSEEGSE--KF  139 (281)
T ss_pred             HHHHHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcC-------------CCceEEEeeee-ccchhhH--HH
Confidence            999999999999999999999999999999999999   55543             11122222222 2221111  11


Q ss_pred             HHHH-hhhhhhhHhhhcc----cccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcCCCEEEEEEE
Q psy7267         245 FRNI-LMKGFHFIVWFTG----VRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLHIPMAEVSVN  315 (569)
Q Consensus       245 ~r~~-~~~~~~~l~~~~~----~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G~rI~~vPv~  315 (569)
                      .... .............    ........+++.+++|+.+.++  +.++|.|    .+|.|++.|+.+.|..+...+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~i--GGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~  217 (281)
T PF10111_consen  140 YSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEI--GGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDY  217 (281)
T ss_pred             hhcchhcchHHHHHHHhhccccccccccccceEEEEEHHHHHHh--CCCCccccCCCcchHHHHHHHHHcCCcEecChHH
Confidence            1100 0000000101111    1111223347789999999999  6666665    46999999999999999888754


Q ss_pred             EE
Q psy7267         316 WT  317 (569)
Q Consensus       316 ~~  317 (569)
                      ..
T Consensus       218 ~~  219 (281)
T PF10111_consen  218 LV  219 (281)
T ss_pred             hc
Confidence            44

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=1.6e-16  Score=145.50  Aligned_cols=106  Identities=36%  Similarity=0.471  Sum_probs=93.5

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      .|++|||||+||+++.|.++|+|+++|...        ++|||||||||+|+|.++++++.++.  .++......+|.|+
T Consensus         2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~--------~~eiivvddgs~d~t~~~~~~~~~~~--~~~~~~~~~~~~g~   71 (291)
T COG0463           2 MPKVSVVIPTYNEEEYLPEALESLLNQTYK--------DFEIIVVDDGSTDGTTEIAIEYGAKD--VRVIRLINERNGGL   71 (291)
T ss_pred             CccEEEEEeccchhhhHHHHHHHHHhhhhc--------ceEEEEEeCCCCCChHHHHHHHhhhc--ceEEEeecccCCCh
Confidence            477999999999999999999999998443        47999999999999999999987764  45666777889999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHH
Q psy7267         169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKL  205 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~  205 (569)
                      +.|+|.|+..+.+|+++++|+|+. .++.+..+.+..
T Consensus        72 ~~~~~~~~~~~~~~~~~~~d~d~~-~~~~~~~~~~~~  107 (291)
T COG0463          72 GAARNAGLEYARGDYIVFLDADDQ-HPPELIPLVAAG  107 (291)
T ss_pred             HHHHHhhHHhccCCEEEEEccCCC-CCHHHHHHHHHh
Confidence            999999999999999999999999 998888844444

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide

Probab=99.68  E-value=3.7e-16  Score=155.25  Aligned_cols=99  Identities=24%  Similarity=0.224  Sum_probs=89.9

Q ss_pred             cEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHH
Q psy7267          91 NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGG  170 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~  170 (569)
                      +|||+||+|||++.|++||+|+..+           ..|||||||||+|+|.+++++       .+++++.. ++.|.+.
T Consensus         1 ~isvii~~~Ne~~~l~~~l~sl~~~-----------~~eiivvD~gStD~t~~i~~~-------~~~~v~~~-~~~g~~~   61 (229)
T cd02511           1 TLSVVIITKNEERNIERCLESVKWA-----------VDEIIVVDSGSTDRTVEIAKE-------YGAKVYQR-WWDGFGA   61 (229)
T ss_pred             CEEEEEEeCCcHHHHHHHHHHHhcc-----------cCEEEEEeCCCCccHHHHHHH-------cCCEEEEC-CCCChHH
Confidence            3899999999999999999999765           349999999999999999985       35677776 8999999


Q ss_pred             HHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         171 AVTLGTKCARGSIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       171 AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      |+|.|++.|++|||+++|+|..++|+.++++.+.+++.
T Consensus        62 ~~n~~~~~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~~   99 (229)
T cd02511          62 QRNFALELATNDWVLSLDADERLTPELADEILALLATD   99 (229)
T ss_pred             HHHHHHHhCCCCEEEEEeCCcCcCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999874

UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

Probab=99.59  E-value=3.6e-14  Score=126.71  Aligned_cols=151  Identities=31%  Similarity=0.339  Sum_probs=120.8

Q ss_pred             EEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          94 VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        94 VIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      |+||++|+.+.+.++++++.++      .+  ...||+++||+++|.+.+.++++.+..  ..+..+....+.|++.++|
T Consensus         1 iii~~~~~~~~l~~~l~s~~~~------~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~   70 (156)
T cd00761           1 VIIPAYNEEPYLERCLESLLAQ------TY--PNFEVIVVDDGSTDGTLEILEEYAKKD--PRVIRVINEENQGLAAARN   70 (156)
T ss_pred             CEEeecCcHHHHHHHHHHHHhC------Cc--cceEEEEEeCCCCccHHHHHHHHHhcC--CCeEEEEecCCCChHHHHH
Confidence            6899999999999999999886      33  278999999999999999998876542  3456666788999999999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhh
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGF  253 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~  253 (569)
                      .|++.+++|+++++|+|..++|+++..++..+...             ++.+++.+.                       
T Consensus        71 ~~~~~~~~d~v~~~d~D~~~~~~~~~~~~~~~~~~-------------~~~~~v~~~-----------------------  114 (156)
T cd00761          71 AGLKAARGEYILFLDADDLLLPDWLERLVAELLAD-------------PEADAVGGP-----------------------  114 (156)
T ss_pred             HHHHHhcCCEEEEECCCCccCccHHHHHHHHHhcC-------------CCceEEecc-----------------------
Confidence            99999999999999999999999999986655543             455666654                       


Q ss_pred             hhHhhhcccccccccccceeeEeHHHHHHHhccccCCc---hhhchHHHHHHHHcCCCE
Q psy7267         254 HFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQR---WAFDVELLFIAEVLHIPM  309 (569)
Q Consensus       254 ~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~---~~~D~EL~~Ra~~~G~rI  309 (569)
                                       +..++++++++++  +...+.   +.+|.++..++...|.++
T Consensus       115 -----------------~~~~~~~~~~~~~--~~~~~~~~~~~ed~~~~~~~~~~g~~~  154 (156)
T cd00761         115 -----------------GNLLFRRELLEEI--GGFDEALLSGEEDDDFLLRLLRGGKVA  154 (156)
T ss_pred             -----------------chheeeHHHHHHh--CCcchHhcCCcchHHHHHHHHhhcccc
Confidence                             4569999999998  332222   246888888888877654

Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als

>KOG3736|consensus

Probab=99.24  E-value=5.7e-12  Score=139.29  Aligned_cols=206  Identities=20%  Similarity=0.107  Sum_probs=141.2

Q ss_pred             CCCccEEEEEeecCCCCC-hHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH-HHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          87 EPSVNLSVIVPAYNEQDR-LKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT-MQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~-I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T-~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ...|..||||+.+||+.. +-+++.|+++..-.      ..--|||+|||+|+..- .+.++++.+.+  ..+++++.++
T Consensus       139 ~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~------~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~--~~v~i~r~~~  210 (578)
T KOG3736|consen  139 DKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPP------YLLKEIILVDDFSDRDHLKDKLEEYVKRF--SKVRILRTKK  210 (578)
T ss_pred             cccCCCceEEEEecCCCcchhheEEeehccCCh------hHeEEEEEeecCcchhhhhhhhHHHHhhh--cceeEEeecc
Confidence            457889999999999965 55555565554221      22359999999997654 66688888887  4599999999


Q ss_pred             CCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhH-
Q psy7267         165 NRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRS-  243 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~-  243 (569)
                      +.|.-.|+..|.+.|+||+++|+|+-+.....|++.+++.+.....              .+|+..-..++.+++.... 
T Consensus       211 R~GLIrARl~GA~~A~geVL~FLDsHcE~n~gWLePLL~~I~~~r~--------------tvv~PvID~Id~~tf~y~~~  276 (578)
T KOG3736|consen  211 REGLIRARLLGASMATGEVLTFLDSHCEVNVGWLEPLLARIAEDRK--------------TVVCPVIDVIDDNTFEYEKQ  276 (578)
T ss_pred             hhhhHHHHhhhhhhhhchheeeeecceeEecCcchHHHHHhhhcCc--------------eeecceEEeecCcCceeccc
Confidence            9999999999999999999999999999999999999999987532              2333222222222211111 


Q ss_pred             --HHHHHhhhhh---------hhHhhhcc-cccc--cccccceeeEeHHHHHHHhccccCCch---h-hchHHHHHHHHc
Q psy7267         244 --FFRNILMKGF---------HFIVWFTG-VRTI--RDTQCGFKLFTRKSALQLFSSIHVQRW---A-FDVELLFIAEVL  305 (569)
Q Consensus       244 --~~r~~~~~~~---------~~l~~~~~-~~~i--~d~~~gf~lfrR~al~~I~~~~~~e~~---~-~D~EL~~Ra~~~  305 (569)
                        ..+.-+.+.+         ....+... ..++  ....||.++++|+.+.++  +..+++.   + +.+||++|+...
T Consensus       277 ~~~~rGgFdW~l~f~w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~ei--G~yD~gMdiwGGENlElSfrvWqC  354 (578)
T KOG3736|consen  277 SELMRGGFDWELTFKWERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGEL--GSYDEGMDIWGGENLELSFRVWQC  354 (578)
T ss_pred             CccceeeeecceeEEeccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhc--cCccccccccChhhceeeEEEecc
Confidence              0000000000         01111101 1122  234467889999999999  5554443   2 599999999999


Q ss_pred             CCCEEEEEEEE
Q psy7267         306 HIPMAEVSVNW  316 (569)
Q Consensus       306 G~rI~~vPv~~  316 (569)
                      |.++..+|.+.
T Consensus       355 GG~lei~PCSr  365 (578)
T KOG3736|consen  355 GGRLEIVPCSR  365 (578)
T ss_pred             CCeEEecCccc
Confidence            99999999543

>KOG3737|consensus

Probab=99.24  E-value=9.1e-12  Score=129.12  Aligned_cols=212  Identities=17%  Similarity=0.111  Sum_probs=141.0

Q ss_pred             CCCccEEEEEeecCCCCC-hHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCcc-HHHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          87 EPSVNLSVIVPAYNEQDR-LKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDK-TMQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~-I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~-T~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ...|..||||..+||.-. |-+++.|++...-      +.--.||++|||-|+.+ ..+.+.++...+. ..|+|+++++
T Consensus       152 e~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP------~~~l~eivlvDDfSdKehLkekLDeYv~~fn-GlVkV~Rne~  224 (603)
T KOG3737|consen  152 ENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSP------RKYLAEIVLVDDFSDKEHLKEKLDEYVKLFN-GLVKVFRNER  224 (603)
T ss_pred             ccCCcceEEEEEecCccHHHHHHHHHHHhcCc------HHhhheEEEeccCCccHHHHHHHHHHHHHhc-CEEEEEecch
Confidence            457889999999999954 6667777765311      11245999999999754 6788888888874 6789999999


Q ss_pred             CCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccc-ccchhhH
Q psy7267         165 NRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEA-LANVQRS  243 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~-~~~~~~~  243 (569)
                      +.|.-.|+..|.++|.|++++|+||.+.+.-+|++.|++.+..+...-.+       +-.|.+-+....... .+.. ..
T Consensus       225 REGLI~aRSiGA~~atGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTV-------P~IDgId~n~~EyrpvyG~d-n~  296 (603)
T KOG3737|consen  225 REGLIQARSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTV-------PLIDGIDGNTYEYRPVYGGD-ND  296 (603)
T ss_pred             hhhhhhhhccchhhccccEEEEEecceeeecccccccccccccCceEEEE-------eeeeeecCCceEEeeccCCc-ch
Confidence            99999999999999999999999999999999999999999874211111       011111111111100 0000 00


Q ss_pred             HHHHHhhhhhh----hHhh------hcccc--cccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcCC
Q psy7267         244 FFRNILMKGFH----FIVW------FTGVR--TIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLHI  307 (569)
Q Consensus       244 ~~r~~~~~~~~----~l~~------~~~~~--~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G~  307 (569)
                      ..+.+..+++-    .+..      .....  +.....+|.+++.|+.+.++  +..+++.    .+..||++++.+.|.
T Consensus       297 h~rGifeWgmLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~EL--G~YDpgLqiWGGEnfElSfKIWQCGG  374 (603)
T KOG3737|consen  297 HARGIFEWGMLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFEL--GLYDPGLQIWGGENFELSFKIWQCGG  374 (603)
T ss_pred             hhcchhhhhheeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHh--ccCCCcceeecCcceeEEEEEEeeCC
Confidence            12222111110    0000      00011  12233467889999999999  6555544    358899999999999


Q ss_pred             CEEEEEEE
Q psy7267         308 PMAEVSVN  315 (569)
Q Consensus       308 rI~~vPv~  315 (569)
                      +|.++|.+
T Consensus       375 ~i~fVPCS  382 (603)
T KOG3737|consen  375 KILFVPCS  382 (603)
T ss_pred             EEEEEEcc
Confidence            99999964

>KOG3738|consensus

Probab=99.22  E-value=1.6e-11  Score=127.69  Aligned_cols=212  Identities=18%  Similarity=0.055  Sum_probs=134.8

Q ss_pred             CCccEEEEEeecCCCCC-hHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDR-LKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNR  166 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~-I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~  166 (569)
                      .+|.-||||..+||+.. |-+++.|+++..-+      ..-.|||+|||+|.|.+  ..+.+. +.  ++++++++.++.
T Consensus       122 dlp~TsviITfHNEARS~LLRTv~SvlnrsP~------~li~EiILVDD~S~Dpe--d~~~L~-ri--~kvr~LRN~~Re  190 (559)
T KOG3738|consen  122 DLPPTSVIITFHNEARSTLLRTVVSVLNRSPE------HLIHEIILVDDFSQDPE--DGKLLK-RI--PKVRVLRNNERE  190 (559)
T ss_pred             CCCCceEEEEeccHHHHHHHHHHHHHHcCChH------HhhheeEEecCCCCChH--HHHHHh-hh--heeeeecccchh
Confidence            46788999999999964 66667777664222      11359999999999864  233332 22  789999999999


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCC-CCceEEEeeeeecccccchhhHHH
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAA-GCNGVIVGSRAHLEALANVQRSFF  245 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~-~g~dvV~G~r~~~~~~~~~~~~~~  245 (569)
                      |.-..++.|...|++.++.|+|+.+.+..+||+.|++.++++....+.+...... +....+.++...  .++ ..+++.
T Consensus       191 GLirSRvrGAdvA~a~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf~Y~~asadL--rGG-FDWsLh  267 (559)
T KOG3738|consen  191 GLIRSRVRGADVAQATVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNFSYVGASADL--RGG-FDWSLH  267 (559)
T ss_pred             hhhhhhccccccccceEEEEEecceeecchhhHHHHHHHhhcccceeecccccccccccccccchhhh--cCC-cceEEE
Confidence            9999999999999999999999999999999999999998764333322111100 011111111110  011 011110


Q ss_pred             HHHh-hhhhhhHhhh--cccccccccccceeeEeHHHHHHHhccccC---Cchh-hchHHHHHHHHcCCCEEEEEEE
Q psy7267         246 RNIL-MKGFHFIVWF--TGVRTIRDTQCGFKLFTRKSALQLFSSIHV---QRWA-FDVELLFIAEVLHIPMAEVSVN  315 (569)
Q Consensus       246 r~~~-~~~~~~l~~~--~~~~~i~d~~~gf~lfrR~al~~I~~~~~~---e~~~-~D~EL~~Ra~~~G~rI~~vPv~  315 (569)
                      -++. +.......+.  .....-....||.+++.|+.++++  +..+   +-|+ +.+||++|....|..+..+|.+
T Consensus       268 F~We~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~L--Gkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCS  342 (559)
T KOG3738|consen  268 FKWEQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNEL--GKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCS  342 (559)
T ss_pred             EEehhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHh--cccCccccccCCcceEEEEEEEeeCCeeEEEecc
Confidence            0000 0000111110  111122335578899999999998  3322   3343 5889999999999999999854

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=99.11  E-value=1.5e-09  Score=104.45  Aligned_cols=143  Identities=15%  Similarity=-0.000  Sum_probs=102.9

Q ss_pred             EEEEcCCCCC---hHHHHHHHHHh-ccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeee
Q psy7267         158 RGLKLLKNRG---KGGAVTLGTKC-ARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAH  233 (569)
Q Consensus       158 ~vi~~~~n~G---ka~AlN~Gl~~-A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~  233 (569)
                      +++..++..|   |..++..|+++ +++|+++++|+|..++|++|..++..+++              +++++|.+....
T Consensus         5 ~lvv~~~~~g~N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~--------------p~vglVt~~~~~   70 (175)
T PF13506_consen    5 RLVVGGPPRGCNPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLAD--------------PGVGLVTGLPRG   70 (175)
T ss_pred             EEEECCCCCCCChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhC--------------CCCcEEEecccc
Confidence            3555455544   99999999998 99999999999999999999999999987              577899887765


Q ss_pred             cccccchhhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhcccc---CCchhhchHHHHHHHHcCCCEE
Q psy7267         234 LEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIH---VQRWAFDVELLFIAEVLHIPMA  310 (569)
Q Consensus       234 ~~~~~~~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~---~e~~~~D~EL~~Ra~~~G~rI~  310 (569)
                      ...+++...-. ..+.......+..   ..+.....|++.++||++++++  +..   .+.+.+|+.|..++.+.|+++.
T Consensus        71 ~~~~~~~~~l~-~~~~~~~~~~~~a---~~~~~~~~G~~m~~rr~~L~~~--GG~~~l~~~ladD~~l~~~~~~~G~~v~  144 (175)
T PF13506_consen   71 VPARGFWSRLE-AAFFNFLPGVLQA---LGGAPFAWGGSMAFRREALEEI--GGFEALADYLADDYALGRRLRARGYRVV  144 (175)
T ss_pred             cCCcCHHHHHH-HHHHhHHHHHHHH---hcCCCceecceeeeEHHHHHHc--ccHHHHhhhhhHHHHHHHHHHHCCCeEE
Confidence            55444333221 1111222222222   1244456678889999999998  332   2467789999999999999999


Q ss_pred             EEEEEEEEec
Q psy7267         311 EVSVNWTEIE  320 (569)
Q Consensus       311 ~vPv~~~~~~  320 (569)
                      ..|.......
T Consensus       145 ~~~~~v~~~~  154 (175)
T PF13506_consen  145 LSPYPVVQTS  154 (175)
T ss_pred             Ecchheeecc
Confidence            9986544433

>KOG2547|consensus

Probab=99.05  E-value=9.3e-10  Score=114.18  Aligned_cols=200  Identities=12%  Similarity=-0.001  Sum_probs=143.3

Q ss_pred             CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCC
Q psy7267          87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNR  166 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~  166 (569)
                      +..|.||||.|...-++++-+.+|+....      +|+  ++|++.+-+.++|...++++++.++||+-..+++...+..
T Consensus        82 ~~LPgVSiikPl~G~d~nl~~Nlesffts------~Y~--~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~v  153 (431)
T KOG2547|consen   82 PKLPGVSIIKPLKGVDPNLYHNLESFFTS------QYH--KYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKV  153 (431)
T ss_pred             CCCCCceEEeecccCCchhHHhHHHHHhh------ccC--ceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEccccc
Confidence            36789999999999999998888888877      788  8999999999999999999999999976667777767766


Q ss_pred             C---hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhH
Q psy7267         167 G---KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRS  243 (569)
Q Consensus       167 G---ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~  243 (569)
                      |   |-.++--|.+.|+.|+|++.|+|..+.||.+-.|...+.++             +.-..|.+.+.-.+.++....-
T Consensus       154 g~npKInN~mpgy~~a~ydlvlisDsgI~m~pdtildm~t~M~sh-------------ekmalvtq~py~~dr~Gf~atl  220 (431)
T KOG2547|consen  154 GLNPKINNMMPGYRAAKYDLVLISDSGIFMKPDTILDMATTMMSH-------------EKMALVTQTPYCKDRQGFDATL  220 (431)
T ss_pred             ccChhhhccCHHHHHhcCCEEEEecCCeeecCchHHHHHHhhhcc-------------cceeeecCCceeeccccchhhh
Confidence            6   77778889999999999999999999999999999999986             4556777766655544422111


Q ss_pred             HHHHHhhhhhhhHhhhcccccccc---cccceeeEeHHHHHHHhccccC--CchhhchHHHHHHHHcCCCEEEE
Q psy7267         244 FFRNILMKGFHFIVWFTGVRTIRD---TQCGFKLFTRKSALQLFSSIHV--QRWAFDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       244 ~~r~~~~~~~~~l~~~~~~~~i~d---~~~gf~lfrR~al~~I~~~~~~--e~~~~D~EL~~Ra~~~G~rI~~v  312 (569)
                      ....+...    -.+.....+..+   .++-..++||+++++. ++..+  ....+|+=+.......|++-...
T Consensus       221 e~~~fgTs----h~r~yl~~n~~~~~c~tgms~~mrK~~ld~~-ggi~~f~~yLaedyFaaksllSRG~ksais  289 (431)
T KOG2547|consen  221 EQVYFGTS----HPRIYLSGNVLGFNCSTGMSSMMRKEALDEC-GGISAFGGYLAEDYFAAKSLLSRGWKSAIS  289 (431)
T ss_pred             hheeeccC----CceEEEccccccccccccHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence            11111110    011111112222   2222358899999997 33322  23345777777777778775444

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=98.90  E-value=1.4e-08  Score=97.42  Aligned_cols=140  Identities=16%  Similarity=0.052  Sum_probs=87.3

Q ss_pred             EEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHH-HHHHhhhhhhhHhhhcc
Q psy7267         183 IILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSF-FRNILMKGFHFIVWFTG  261 (569)
Q Consensus       183 ~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~-~r~~~~~~~~~l~~~~~  261 (569)
                      ||+++|+|+.++||.++++++.+++              ++++++.+.....+.++...+.. .................
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~~--------------~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALED--------------PKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSL   66 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHhC--------------CCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhc
Confidence            6899999999999999999999984              56788877665432222111111 11000000001111111


Q ss_pred             cccccccccceeeEeHHHHHHHhcccc-CCchhhchHHHHHHHHcCCCEEEEEEEEEEec-CCccchhHHHHHHHHHHHH
Q psy7267         262 VRTIRDTQCGFKLFTRKSALQLFSSIH-VQRWAFDVELLFIAEVLHIPMAEVSVNWTEIE-GSKIVPVFSWIQMGWDVLN  339 (569)
Q Consensus       262 ~~~i~d~~~gf~lfrR~al~~I~~~~~-~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~-GS~~~~~~~~~~~~~~~l~  339 (569)
                      + ......|+..++|+++++++ +++. .....||.|++.|+.++|+++.++|....+.. .+.          .+..++
T Consensus        67 ~-~~~~~~G~~~~~r~~~l~~v-g~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~t----------~~~~~~  134 (193)
T PF13632_consen   67 G-RPLFLSGSGMLFRREALREV-GGFDDPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPPT----------FRAFIR  134 (193)
T ss_pred             C-CCccccCcceeeeHHHHHHh-CcccccccccchHHHHHHHHHCCCEEEEecccceeeeCCCC----------HHHHHH
Confidence            2 12223456679999999999 2233 35566899999999999999999997532222 222          256667


Q ss_pred             HHHHhcchh
Q psy7267         340 IWLHYTLGL  348 (569)
Q Consensus       340 ~r~ry~~g~  348 (569)
                      ||.||..|.
T Consensus       135 Qr~RW~~g~  143 (193)
T PF13632_consen  135 QRRRWARGA  143 (193)
T ss_pred             HHHHHHhhh
Confidence            777777773

>PLN02893 Cellulose synthase-like protein

Probab=98.89  E-value=1.4e-07  Score=107.16  Aligned_cols=162  Identities=13%  Similarity=0.027  Sum_probs=92.1

Q ss_pred             hHHHHHHHHHh----ccCcEEEEEcCCCCC-ChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeee--cccccch
Q psy7267         168 KGGAVTLGTKC----ARGSIILFADADGAT-KFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAH--LEALANV  240 (569)
Q Consensus       168 ka~AlN~Gl~~----A~gd~Vv~lDaD~~~-~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~--~~~~~~~  240 (569)
                      ||+|+|.+++.    ++|++|+.+|+|... +|+.+++.+-.|.+..          ..++...|+-...-  .+.+.. 
T Consensus       282 KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~Dp~----------~~~~vafVQfPQ~F~~i~~~D~-  350 (734)
T PLN02893        282 KAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLLDPS----------MDPKLGYVQFPQIFHGINKNDI-  350 (734)
T ss_pred             ccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhcCCC----------cCCceEEEeCcccccCCCcCCC-
Confidence            99999999996    689999999999985 6899999999887631          01244555532211  111110 


Q ss_pred             hhHHHHHHhhhhhhhHhhhcccc-cccccccceeeEeHHHHH---------HH---------------------------
Q psy7267         241 QRSFFRNILMKGFHFIVWFTGVR-TIRDTQCGFKLFTRKSAL---------QL---------------------------  283 (569)
Q Consensus       241 ~~~~~r~~~~~~~~~l~~~~~~~-~i~d~~~gf~lfrR~al~---------~I---------------------------  283 (569)
                      .....+.    ++......+.+. +....+ ..+++||+++-         ++                           
T Consensus       351 y~~~~~v----ff~~~~~glDG~~gp~y~G-TGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~s  425 (734)
T PLN02893        351 YAGELKR----LFQINMIGMDGLAGPNYVG-TGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAG  425 (734)
T ss_pred             CcchhHH----HHHHHhhcccccCCceeec-cceEEEHHHhcCCCccccchhhhhcccccccccccchHHHHHHhhhccc
Confidence            0000111    111111111111 111122 23488999982         11                           


Q ss_pred             --hc---------cccCCchhhchHHHHHHHHcCCCEEEEEEEEEEecCCccchhHHHHHHHHHHHHHHHHhcchhhHHH
Q psy7267         284 --FS---------SIHVQRWAFDVELLFIAEVLHIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK  352 (569)
Q Consensus       284 --~~---------~~~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~  352 (569)
                        ++         ++..+...||+...++++.+||+..++.-.-....|..-.       .....+.|+.||..|..++.
T Consensus       426 C~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~-------~l~~~l~Q~~RWa~G~lqI~  498 (734)
T PLN02893        426 CNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPI-------NLHDVLNQQKRWSVGLLEVA  498 (734)
T ss_pred             cccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCC-------CHHHHHHHHHHHHhhhHHHH
Confidence              00         1111223779999999999999998874211111231111       12567889999999987765

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides

Probab=98.74  E-value=5.6e-08  Score=102.34  Aligned_cols=106  Identities=24%  Similarity=0.239  Sum_probs=81.7

Q ss_pred             EEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC----CCC
Q psy7267          92 LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK----NRG  167 (569)
Q Consensus        92 VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~----n~G  167 (569)
                      +.|+|++||..+.+.++|++++++-      ....+.+|+|.+||+++++.+.++.+.     ..++++.+..    |.|
T Consensus         2 ~PVlv~ayNRp~~l~r~LesLl~~~------p~~~~~~liIs~DG~~~~~~~~v~~~~-----~~i~~i~~~~~~~~~~~   70 (334)
T cd02514           2 IPVLVIACNRPDYLRRMLDSLLSYR------PSAEKFPIIVSQDGGYEEVADVAKSFG-----DGVTHIQHPPISIKNVN   70 (334)
T ss_pred             cCEEEEecCCHHHHHHHHHHHHhcc------ccCCCceEEEEeCCCchHHHHHHHhhc-----cccEEEEcccccccccC
Confidence            5799999999999999999999862      122367999999999998888887763     2455665432    211


Q ss_pred             ----------hHH----HHHHHHHhccCcEEEEEcCCCCCChhhH---HHHHHHHHhc
Q psy7267         168 ----------KGG----AVTLGTKCARGSIILFADADGATKFADL---EKLEDKLKEL  208 (569)
Q Consensus       168 ----------ka~----AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L---~~lv~~~~~~  208 (569)
                                .+.    |+|.++..++++.++++|.|+.+.|+++   +++++.++++
T Consensus        71 ~~~~~~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D  128 (334)
T cd02514          71 PPHKFQGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEED  128 (334)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcC
Confidence                      233    9999999889999999999999999965   5566666653

Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.68  E-value=2.3e-06  Score=92.66  Aligned_cols=210  Identities=16%  Similarity=0.132  Sum_probs=119.4

Q ss_pred             ccEEEEEeecCCCCC-hHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHH-----HhHhh-CCCeEEEEEc
Q psy7267          90 VNLSVIVPAYNEQDR-LKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQ-----YTEKC-GEDIVRGLKL  162 (569)
Q Consensus        90 p~VSVIIP~yNE~~~-I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~-----~~~~~-~~~~V~vi~~  162 (569)
                      .+-.|++|+|||+.. +-.-|+.+-+++.+.   -....+++.|+.| |+|.-...+|+     +.++. ++.+|-+-+.
T Consensus       144 hrTAilmPiynEd~~rVfAgLrA~~eSla~T---g~~~~FD~FVLSD-s~dpdialAEq~a~~~l~~e~~g~~~ifYRrR  219 (736)
T COG2943         144 HRTAILMPIYNEDVNRVFAGLRATYESLAAT---GHAEHFDFFVLSD-SRDPDIALAEQKAWAELCRELGGEGNIFYRRR  219 (736)
T ss_pred             cceeEEeeccccCHHHHHHHHHHHHHHHHhh---CCcccceEEEEcC-CCCchhhhhHHHHHHHHHHHhCCCCceeeehH
Confidence            347999999999842 222233333343331   1234788999888 56654444443     22221 2357777666


Q ss_pred             CCCCC-hHHHHHHHHHh--ccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccc
Q psy7267         163 LKNRG-KGGAVTLGTKC--ARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALAN  239 (569)
Q Consensus       163 ~~n~G-ka~AlN~Gl~~--A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~  239 (569)
                      .+|.| |++++..=.+.  ..+++.+++|||..+..|.+-++++.++.++             ++++++......+.++.
T Consensus       220 r~n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME~~P-------------~aGlIQt~P~~~gg~TL  286 (736)
T COG2943         220 RRNVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLMEANP-------------DAGLIQTSPKASGGDTL  286 (736)
T ss_pred             hhhhcccccCHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHhhCC-------------CCceeecchhhcCcchH
Confidence            67765 66666554444  3579999999999999999999999999985             44555544433333332


Q ss_pred             hhhHHHHHHhhhhh-----hhHhhhcccccccccccceeeEeHHHHHHH--hccccC------CchhhchHHHHHHHHcC
Q psy7267         240 VQRSFFRNILMKGF-----HFIVWFTGVRTIRDTQCGFKLFTRKSALQL--FSSIHV------QRWAFDVELLFIAEVLH  306 (569)
Q Consensus       240 ~~~~~~r~~~~~~~-----~~l~~~~~~~~i~d~~~gf~lfrR~al~~I--~~~~~~------e~~~~D~EL~~Ra~~~G  306 (569)
                      ..+  ...+..+.+     ..+.+...+..  ..=|....+|.+++.+-  ++.+..      +-...|.-=...+++.|
T Consensus       287 ~AR--~qQFatrvYGpl~~~GLawW~~~Es--~yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRaG  362 (736)
T COG2943         287 YAR--CQQFATRVYGPLFTAGLAWWQLGES--HYWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAG  362 (736)
T ss_pred             HHH--HHHHHHHHhchHHhhhhHHHhcccc--ccccccceeechhhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhcC
Confidence            211  111222211     12222222211  11234568999888876  222221      22223544456678899


Q ss_pred             CCEEEEEE---EEEEec
Q psy7267         307 IPMAEVSV---NWTEIE  320 (569)
Q Consensus       307 ~rI~~vPv---~~~~~~  320 (569)
                      +.++..++   +|.|.+
T Consensus       363 W~v~ia~dL~GSyEE~P  379 (736)
T COG2943         363 WGVWIAYDLDGSYEELP  379 (736)
T ss_pred             ceEEEeccCCCchhhCC
Confidence            99887763   444444

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2

Probab=98.65  E-value=1.2e-06  Score=97.13  Aligned_cols=231  Identities=16%  Similarity=0.095  Sum_probs=138.7

Q ss_pred             CccEEEEEeecCCCC-ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC------CccHHHHHHHHhHh----------
Q psy7267          89 SVNLSVIVPAYNEQD-RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS------TDKTMQVVHQYTEK----------  151 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~-~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS------tD~T~eil~~~~~~----------  151 (569)
                      .+.+-.+||+|||.+ .|..+|+|+..+      +||..+-=|+||.||-      +-.|.+++-+....          
T Consensus        24 ~~~~i~~v~cy~E~~~~l~~tldsl~~~------~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~~~~~~~~~~~~   97 (527)
T PF03142_consen   24 DKFVICLVPCYSEGEEELRTTLDSLATT------DYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILGDFVDPPEDPEP   97 (527)
T ss_pred             CceEEEEEccccCChHHHHHHHHHHHhc------CCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhcccCCCcCCCCC
Confidence            345677999999984 477788887766      7887777788888864      23466766543220          


Q ss_pred             ------------------------hC------------CCeEEEEE----------cCCCCChHHHHHHHHHh-------
Q psy7267         152 ------------------------CG------------EDIVRGLK----------LLKNRGKGGAVTLGTKC-------  178 (569)
Q Consensus       152 ------------------------~~------------~~~V~vi~----------~~~n~Gka~AlN~Gl~~-------  178 (569)
                                              +.            .|-+.++.          .+.|+||-..+-..+..       
T Consensus        98 ~~~~~~~~g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~NrGKRDsq~~~~~fl~~~~~~  177 (527)
T PF03142_consen   98 LSYVSLGEGSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNRGKRDSQILLMSFLNKVHFN  177 (527)
T ss_pred             cceEEeccCchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccCCchHHHHHHHHHHHHHhcC
Confidence                                    00            12233444          36788877654333321       


Q ss_pred             ----------------------ccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccc
Q psy7267         179 ----------------------ARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEA  236 (569)
Q Consensus       179 ----------------------A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~  236 (569)
                                            ...||++.+|||+.++|+.+.+|++.+.++             +....++|.-...+.
T Consensus       178 ~~~~~~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d-------------~~i~gvCG~t~i~n~  244 (527)
T PF03142_consen  178 NPMTPLELELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERD-------------PKIGGVCGETRIDNK  244 (527)
T ss_pred             CCCchHHHHHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCC-------------CCeEEEeceeEEcCC
Confidence                                  124999999999999999999999999875             566667774332222


Q ss_pred             -ccchh-hHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHH-----------------Hhc----cccC---C
Q psy7267         237 -LANVQ-RSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQ-----------------LFS----SIHV---Q  290 (569)
Q Consensus       237 -~~~~~-~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~-----------------I~~----~~~~---e  290 (569)
                       +++.. ...+....+...........+ .+.--.|+|.++|-++++.                 ..+    ++..   -
T Consensus       245 ~~s~~t~~Q~fEY~ish~l~Ka~Es~fG-~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~  323 (527)
T PF03142_consen  245 GQSWWTMYQVFEYAISHHLQKAFESVFG-SVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLL  323 (527)
T ss_pred             CCCHhhheeccchhHHHHHHHHHHHHhC-ceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhh
Confidence             22211 111222222222222222233 2333334677877766554                 101    1111   1


Q ss_pred             chhhchHHHHHHHHc--CCCEEEEEEE--EEEecCCccchhHHHHHHHHHHHHHHHHhcchhhH
Q psy7267         291 RWAFDVELLFIAEVL--HIPMAEVSVN--WTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGLWK  350 (569)
Q Consensus       291 ~~~~D~EL~~Ra~~~--G~rI~~vPv~--~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~  350 (569)
                      .++||-.|+..+.+.  ++++.++|..  ++..+.+.           ..++.||+||..+.+.
T Consensus       324 ~lGEDR~LttLlLk~~~~~k~~y~~~A~a~T~aP~t~-----------~vflsQRRRWinSTi~  376 (527)
T PF03142_consen  324 DLGEDRWLTTLLLKQFPGYKTEYVPSAVAYTDAPETF-----------SVFLSQRRRWINSTIH  376 (527)
T ss_pred             hcchhHHHHHHHHhhCCCceEEEcccccccccCCccH-----------HHHHHHhhhccchhHh
Confidence            456788898877777  7888988754  34444433           7788999999988754

4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B

Probab=98.43  E-value=3.5e-07  Score=91.05  Aligned_cols=145  Identities=10%  Similarity=-0.009  Sum_probs=71.0

Q ss_pred             CCCChHHHHHHHHHhccCcEEEEEcCCCCC-ChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccch-h
Q psy7267         164 KNRGKGGAVTLGTKCARGSIILFADADGAT-KFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANV-Q  241 (569)
Q Consensus       164 ~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~-~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~-~  241 (569)
                      ...+.+.|+|.|+++|+++|+++++.|..+ +++++..+++.++++++.+++|.           .|.+.....+.+. .
T Consensus        38 ~~~s~~~~yN~a~~~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGv-----------aG~~~~~~~~~~w~~  106 (217)
T PF13712_consen   38 NAKSMAAAYNEAMEKAKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGV-----------AGSKRLPPNGVWWES  106 (217)
T ss_dssp             S-S-TTTHHHHHGGG--SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEES-----------EEEESS-S-TTS---
T ss_pred             CCcCHHHHHHHHHHhCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEe-----------ecCCcCCCCCccccc
Confidence            346788999999999999999999999876 68999999999976644333321           2333221111100 0


Q ss_pred             h----------HHHHHHhhhhh-hh-Hhh--hcccccccccccceeeEeHHHHHHHhccccCCch-hhchHHHHHHHHcC
Q psy7267         242 R----------SFFRNILMKGF-HF-IVW--FTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW-AFDVELLFIAEVLH  306 (569)
Q Consensus       242 ~----------~~~r~~~~~~~-~~-l~~--~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~-~~D~EL~~Ra~~~G  306 (569)
                      .          +.......... .. +..  ......+...-+.+.+.+|+++ .. +...-.+| .+|++++.+++++|
T Consensus       107 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~-~f-de~~~~gfH~Ydvd~cl~~~~~G  184 (217)
T PF13712_consen  107 PNKVGKVREYGRIMHGHGPNSAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP-RF-DEDLFTGFHFYDVDQCLEARRAG  184 (217)
T ss_dssp             EEEEEETTEEEE----E-------------ES-SSEEEEEE-TTEEEEETTB-------SS--SSSSHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccccccccccccccccCCceeEEEecceEEEEEcccC-CC-CccccCCcchHHHHHHHHHHHhC
Confidence            0          00000000000 00 000  0112233344456788899888 32 22212345 57999999999999


Q ss_pred             CCEEEEEEEEEEecC
Q psy7267         307 IPMAEVSVNWTEIEG  321 (569)
Q Consensus       307 ~rI~~vPv~~~~~~G  321 (569)
                      +++...|....+..+
T Consensus       185 ~~v~~~~~~~~H~s~  199 (217)
T PF13712_consen  185 YRVVVPPPWCIHFSG  199 (217)
T ss_dssp             -EEEE-----EE-S-
T ss_pred             CEEEecCceEEEcCC
Confidence            999666655445444

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2

Probab=97.97  E-value=2e-05  Score=67.68  Aligned_cols=81  Identities=22%  Similarity=0.184  Sum_probs=55.7

Q ss_pred             cCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC---h-HHHHHH
Q psy7267          99 YNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG---K-GGAVTL  174 (569)
Q Consensus        99 yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G---k-a~AlN~  174 (569)
                      +||+..|++.|+..++.    .      --+++|+||||+|+|.++++++      +.+.++.......   . ...++.
T Consensus         1 rne~~~L~~wl~~~~~l----G------~d~i~i~d~~s~D~t~~~l~~~------~~v~i~~~~~~~~~~~~~~~~~~~   64 (97)
T PF13704_consen    1 RNEADYLPEWLAHHLAL----G------VDHIYIYDDGSTDGTREILRAL------PGVGIIRWVDPYRDERRQRAWRNA   64 (97)
T ss_pred             CChHHHHHHHHHHHHHc----C------CCEEEEEECCCCccHHHHHHhC------CCcEEEEeCCCccchHHHHHHHHH
Confidence            68888888888877543    1      2379999999999999999886      3466665443322   2 233344


Q ss_pred             HHHh-ccCcEEEEEcCCCCCCh
Q psy7267         175 GTKC-ARGSIILFADADGATKF  195 (569)
Q Consensus       175 Gl~~-A~gd~Vv~lDaD~~~~p  195 (569)
                      ..+. ..+||++++|+|..+.+
T Consensus        65 ~~~~~~~~dWvl~~D~DEfl~~   86 (97)
T PF13704_consen   65 LIERAFDADWVLFLDADEFLVP   86 (97)
T ss_pred             HHHhCCCCCEEEEEeeeEEEec
Confidence            3334 36799999999976543

>PLN02190 cellulose synthase-like protein

Probab=97.75  E-value=0.00071  Score=77.44  Aligned_cols=116  Identities=15%  Similarity=0.151  Sum_probs=81.0

Q ss_pred             CCccEEEEEeecC---CCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHH----------------
Q psy7267          88 PSVNLSVIVPAYN---EQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQY----------------  148 (569)
Q Consensus        88 ~~p~VSVIIP~yN---E~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~----------------  148 (569)
                      ..|.|.|.|+++|   |+..  -+++++++.+.-   |||.+++-++|.|||...=|.+.+.|.                
T Consensus        91 ~Lp~VDvFV~TaDP~kEPpl--~v~nTvLSilA~---dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~I  165 (756)
T PLN02190         91 DLPSVDMFVPTADPVREPPI--IVVNTVLSLLAV---NYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNV  165 (756)
T ss_pred             cCCcceEEEecCCCCcCCHH--HHHHHHHHHHhc---cCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCC
Confidence            4689999999999   5542  344555554433   999999999999999887776655440                


Q ss_pred             -----------------------------------hH---------------------------hhC-------------
Q psy7267         149 -----------------------------------TE---------------------------KCG-------------  153 (569)
Q Consensus       149 -----------------------------------~~---------------------------~~~-------------  153 (569)
                                                         ..                           +||             
T Consensus       166 epRaPe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~  245 (756)
T PLN02190        166 RVRAPFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGV  245 (756)
T ss_pred             CcCCHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCc
Confidence                                               00                           000             


Q ss_pred             -----CCeEEEEEcCCCCC-----hHHHHHHHHHhc----cCcEEEEEcCCCCC-ChhhHHHHHHHHHhc
Q psy7267         154 -----EDIVRGLKLLKNRG-----KGGAVTLGTKCA----RGSIILFADADGAT-KFADLEKLEDKLKEL  208 (569)
Q Consensus       154 -----~~~V~vi~~~~n~G-----ka~AlN~Gl~~A----~gd~Vv~lDaD~~~-~pd~L~~lv~~~~~~  208 (569)
                           -|.+.++.++++.|     ||+|+|.-++.+    ++.+|+.+|.|... +|+.+++.+-.+.+.
T Consensus       246 ~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~  315 (756)
T PLN02190        246 GDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQK  315 (756)
T ss_pred             cccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCC
Confidence                 01122333334444     999999999764    78999999999865 789999988887754

>PLN02195 cellulose synthase A

Probab=97.74  E-value=0.00074  Score=79.03  Aligned_cols=41  Identities=20%  Similarity=0.114  Sum_probs=35.2

Q ss_pred             hHHHHHHHHHhc----cCcEEEEEcCCCCCCh-hhHHHHHHHHHhc
Q psy7267         168 KGGAVTLGTKCA----RGSIILFADADGATKF-ADLEKLEDKLKEL  208 (569)
Q Consensus       168 ka~AlN~Gl~~A----~gd~Vv~lDaD~~~~p-d~L~~lv~~~~~~  208 (569)
                      ||+|+|.+++.+    ++++|+.+|+|..+.+ +.+++.+-.|.+.
T Consensus       437 KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~D~  482 (977)
T PLN02195        437 KAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLMDP  482 (977)
T ss_pred             ccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhccCc
Confidence            999999999854    6999999999987655 6899988888764

>PLN02189 cellulose synthase

Probab=97.71  E-value=0.00087  Score=78.85  Aligned_cols=52  Identities=17%  Similarity=0.117  Sum_probs=41.0

Q ss_pred             EEEEEcCCCCC-----hHHHHHHHHHh----ccCcEEEEEcCCCCCC-hhhHHHHHHHHHhc
Q psy7267         157 VRGLKLLKNRG-----KGGAVTLGTKC----ARGSIILFADADGATK-FADLEKLEDKLKEL  208 (569)
Q Consensus       157 V~vi~~~~n~G-----ka~AlN~Gl~~----A~gd~Vv~lDaD~~~~-pd~L~~lv~~~~~~  208 (569)
                      +.++.++++.|     ||+|+|..++.    +++++|+.+|+|.... |+.+++.+=.|.+.
T Consensus       500 LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCfflDp  561 (1040)
T PLN02189        500 LVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDP  561 (1040)
T ss_pred             eEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhhcCC
Confidence            44444444444     99999999954    5799999999999885 59999999888764

>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Probab=97.63  E-value=0.00054  Score=68.20  Aligned_cols=148  Identities=18%  Similarity=0.141  Sum_probs=98.6

Q ss_pred             cEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHH
Q psy7267          91 NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGG  170 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~  170 (569)
                      +++||||-+|.++.|...+..+...+..|..     ++.|+||+-- .                        .....+|.
T Consensus         3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~~-----~~~i~vi~Q~-~------------------------~~~FNR~~   52 (219)
T cd00899           3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQL-----DYRIFVIEQV-G------------------------NFRFNRAK   52 (219)
T ss_pred             ceEEEEecCCHHHHHHHHHHHHHHHHHhcCC-----cEEEEEEEec-C------------------------Cccchhhh
Confidence            5999999999999999999999998888765     6778777531 0                        11245677


Q ss_pred             HHHHHHHhcc----CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHH
Q psy7267         171 AVTLGTKCAR----GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR  246 (569)
Q Consensus       171 AlN~Gl~~A~----gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r  246 (569)
                      .+|.|+..|.    .|++++=|.|..+..+....   ...+.             + .-+..+.-      .     +  
T Consensus        53 llNvG~~~a~k~~~~dc~i~hDVDllP~~~~~~y---~~~~~-------------p-~H~s~~~~------~-----~--  102 (219)
T cd00899          53 LLNVGFLEALKDGDWDCFIFHDVDLLPENDRNLY---GCEEG-------------P-RHLSVPLD------K-----F--  102 (219)
T ss_pred             hhhHHHHHHhhcCCccEEEEecccccccCccccc---cCCCC-------------C-eEEEEeec------c-----c--
Confidence            8888887763    57999999998877665331   11110             0 01111100      0     0  


Q ss_pred             HHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC---chh-hchHHHHHHHHcCCCEEEEE
Q psy7267         247 NILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RWA-FDVELLFIAEVLHIPMAEVS  313 (569)
Q Consensus       247 ~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~~-~D~EL~~Ra~~~G~rI~~vP  313 (569)
                                   ....+....-||..+++|+.+.++  +..++   +|+ ||.||..|+..+|+++...+
T Consensus       103 -------------~~~lpy~~~~Gg~~~~~k~~f~~V--NGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~  158 (219)
T cd00899         103 -------------HYKLPYKTYFGGVLALTREQFRKV--NGFSNAYWGWGGEDDDLYNRIKAAGLKITRPS  158 (219)
T ss_pred             -------------ccccCcccccccceeeEHHHHHHh--CCcCCcCccCCcchHHHHHHHHHCCCeEEecc
Confidence                         000011122357789999999999  44433   454 69999999999999988876

Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit

Probab=97.57  E-value=0.0015  Score=77.11  Aligned_cols=51  Identities=22%  Similarity=0.167  Sum_probs=41.0

Q ss_pred             EEEEcCCCCC-----hHHHHHHHHHh----ccCcEEEEEcCCCCCC-hhhHHHHHHHHHhc
Q psy7267         158 RGLKLLKNRG-----KGGAVTLGTKC----ARGSIILFADADGATK-FADLEKLEDKLKEL  208 (569)
Q Consensus       158 ~vi~~~~n~G-----ka~AlN~Gl~~----A~gd~Vv~lDaD~~~~-pd~L~~lv~~~~~~  208 (569)
                      .++.++++.|     ||+|+|..++.    +++++|+.+|+|.... |+.+++.+=.|.+.
T Consensus       519 VYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~lDp  579 (1079)
T PLN02638        519 VYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDP  579 (1079)
T ss_pred             EEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhhcCc
Confidence            4444455554     99999999965    4799999999998765 99999999888764

>KOG2571|consensus

Probab=97.28  E-value=0.0009  Score=77.57  Aligned_cols=155  Identities=16%  Similarity=0.001  Sum_probs=95.3

Q ss_pred             ChHHHHHHHHHhccC--cEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccc-hhhH
Q psy7267         167 GKGGAVTLGTKCARG--SIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALAN-VQRS  243 (569)
Q Consensus       167 Gka~AlN~Gl~~A~g--d~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~-~~~~  243 (569)
                      ++-..++...+....  ++|+++|+|+.++|+++.+|++.|+.+             +.++.++| +.....+++ ....
T Consensus       425 ~~r~~~y~~~~~L~~~v~~il~vD~dT~~~P~ai~~lv~~f~~d-------------p~VggaCG-~I~~~~~~w~v~~Q  490 (862)
T KOG2571|consen  425 QHRWVMYTAFKALMPSVDYILVVDADTRLDPDALYHLVKVFDED-------------PQVGGACG-RILNKGGSWVVAYQ  490 (862)
T ss_pred             HHHHHHHHHHHHhcCcceEEEEecCCCccCcHHHHHHHHHhccC-------------cccceecc-ccccCCCceEEeHH
Confidence            466677777777654  678999999999999999999999975             45566666 333333332 2222


Q ss_pred             HHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHh----ccc--------cCCchhhchHHHHHHHHcCCCEEE
Q psy7267         244 FFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLF----SSI--------HVQRWAFDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       244 ~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~----~~~--------~~e~~~~D~EL~~Ra~~~G~rI~~  311 (569)
                      .++...++....-..-..+ .+.-..|+|.+||-+++..-.    .+.        .-.++++|-.|+.++..+||++.+
T Consensus       491 ~FEY~Ish~l~Ka~ESvFG-~VsclPGcfs~yR~~aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y  569 (862)
T KOG2571|consen  491 NFEYAISHNLQKATESVFG-CVSCLPGCFSLYRASALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKY  569 (862)
T ss_pred             HHHHHHHHHHHHhhhhhce-eEEecCchhHHHHHHHHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeee
Confidence            3333333332222222222 233344578899987776431    111        113567799999999999999999


Q ss_pred             EEEE--EEEecCCccchhHHHHHHHHHHHHHHHHhcch
Q psy7267         312 VSVN--WTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLG  347 (569)
Q Consensus       312 vPv~--~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g  347 (569)
                      ++..  .++.+.+.           ..++.||.||..|
T Consensus       570 ~a~s~a~t~~Pe~~-----------~efl~QrrRW~~s  596 (862)
T KOG2571|consen  570 VAASDAETEAPESF-----------LEFLNQRRRWLNS  596 (862)
T ss_pred             eccccccccCcHhH-----------HHHHHHhhhhccc
Confidence            9743  33333322           4455566666665

>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]

Probab=97.27  E-value=0.02  Score=58.12  Aligned_cols=201  Identities=12%  Similarity=0.019  Sum_probs=106.0

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCC---
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNR---  166 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~---  166 (569)
                      ++++++||+--.++ .+.+-.++...+.....=-+.+..+||++++.+.-+  ..++.+....  +++.++......   
T Consensus         2 ~~~~~iiPv~~S~e-~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d--~~i~~~i~~~--~~~~yl~~~s~~~F~   76 (346)
T COG4092           2 QPNGEIIPVAESEE-LPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD--RLIRSYIDPM--PRVLYLDFGSPEPFA   76 (346)
T ss_pred             CCcceEeecchhhc-cchhHHHHHhhHhhhhhccccccEEEEEEecchhHH--HHHHHHhccc--cceEEEecCCCcccc
Confidence            45899999865443 344444444422211112355578999998876322  4556665554  676676643221   


Q ss_pred             ChHHHHHHHHHhcc----CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhh
Q psy7267         167 GKGGAVTLGTKCAR----GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQR  242 (569)
Q Consensus       167 Gka~AlN~Gl~~A~----gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~  242 (569)
                      .-+...|.|...+.    .++|+++|+|+....|..++++.-..-..-        .-.-++-.|......-...+....
T Consensus        77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~--------~tnI~a~~vlPV~~LNk~~~~v~f  148 (346)
T COG4092          77 SETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKM--------RTNIDAPLVLPVYHLNKADTQVFF  148 (346)
T ss_pred             chhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHH--------HhccCcceeeeeeecchhhhhHHH
Confidence            12556677776664    899999999999998888777744332100        000122334443332112221111


Q ss_pred             HHHHHHh--hhhhhhHhhhccccc-ccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHc
Q psy7267         243 SFFRNIL--MKGFHFIVWFTGVRT-IRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVL  305 (569)
Q Consensus       243 ~~~r~~~--~~~~~~l~~~~~~~~-i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~  305 (569)
                      .....+.  +-....+........ .....++..++.|+.+-+.  +..+|+|    .+|.|+..|+...
T Consensus       149 ~~~d~f~d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~t--gGydE~F~GhG~EDfe~~~R~~l~  216 (346)
T COG4092         149 DVEDMFLDAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLT--GGYDERFRGHGSEDFEFLTRLGLY  216 (346)
T ss_pred             HHHHHhhhhHhhhhHHHHhCcccccccccccceEEEehhHHHHh--cCCccccccCCchhHHHHHHHHHH
Confidence            1111100  011111111111111 1223346679999999887  5556655    3599999998775

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function

Probab=97.24  E-value=0.0021  Score=65.83  Aligned_cols=111  Identities=17%  Similarity=0.148  Sum_probs=80.5

Q ss_pred             CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC--ccHHHHHHHHhHhhC--------CCe
Q psy7267          87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST--DKTMQVVHQYTEKCG--------EDI  156 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt--D~T~eil~~~~~~~~--------~~~  156 (569)
                      ...++|-|+.|..|.+..+++.++.+.+.      +||+..+.+=++.+.++  |+|.+.+++..++..        -..
T Consensus        22 ~~~e~VLILtplrna~~~l~~y~~~L~~L------~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~   95 (269)
T PF03452_consen   22 RNKESVLILTPLRNAASFLPDYFDNLLSL------TYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRS   95 (269)
T ss_pred             ccCCeEEEEEecCCchHHHHHHHHHHHhC------CCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcce
Confidence            45678999999999999999999888887      89999999977666677  889888875543310        046


Q ss_pred             EEEEEcCCC--------------------CChHHHHHHHHHhc---cCcEEEEEcCCCCC-ChhhHHHHHH
Q psy7267         157 VRGLKLLKN--------------------RGKGGAVTLGTKCA---RGSIILFADADGAT-KFADLEKLED  203 (569)
Q Consensus       157 V~vi~~~~n--------------------~Gka~AlN~Gl~~A---~gd~Vv~lDaD~~~-~pd~L~~lv~  203 (569)
                      |++++.+-.                    .--|.|+|..+..+   ..+||+++|+|..- +|+.|+.|++
T Consensus        96 itIl~~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~  166 (269)
T PF03452_consen   96 ITILRKDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIA  166 (269)
T ss_pred             EEEEcCCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHh
Confidence            777664310                    11567788888776   35899999999864 5555555544

These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].

>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.17  E-value=0.0029  Score=68.82  Aligned_cols=108  Identities=21%  Similarity=0.254  Sum_probs=65.2

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC----
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL----  163 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~----  163 (569)
                      ..+.+-|+|-++|....+.+||++|++.-..      ...+.|+|-.||+++.+.++++++...     ++.++..    
T Consensus        91 ~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~------~~~fpIiVSQDg~~~~~~~vi~~y~~~-----v~~i~~~~~~~  159 (434)
T PF03071_consen   91 KEPVIPVLVFACNRPDYLRRTLDSLLKYRPS------AEKFPIIVSQDGDDEEVAEVIKSYGDQ-----VTYIQHPDFSP  159 (434)
T ss_dssp             ------EEEEESS-TT-HHHHHHHHHHH-S-------TTTS-EEEEE-TT-HHHHHHHHGGGGG-----SEEEE-S--S-
T ss_pred             CCCcceEEEEecCCcHHHHHHHHHHHHcCCC------CCCccEEEEecCCcHHHHHHHHHhhhh-----heeeecCCcCC
Confidence            3456899999999999999999999986211      235679999999999999999887533     2333321    


Q ss_pred             -----CC-C-----C----hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHH
Q psy7267         164 -----KN-R-----G----KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLK  206 (569)
Q Consensus       164 -----~n-~-----G----ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~  206 (569)
                           .+ .     +    -..|++..+..-+.+.++++..|..+.||+++-+.+...
T Consensus       160 i~~~~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~  217 (434)
T PF03071_consen  160 ITIPPKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLP  217 (434)
T ss_dssp             ----TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHH
T ss_pred             ceeCcccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHH
Confidence                 11 0     1    123455555444678999999999999999876665443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.

>PLN02248 cellulose synthase-like protein

Probab=97.13  E-value=0.0098  Score=70.64  Aligned_cols=40  Identities=20%  Similarity=0.160  Sum_probs=34.5

Q ss_pred             hHHHHHHHHH----hccCcEEEEEcCCCCCC-hhhHHHHHHHHHh
Q psy7267         168 KGGAVTLGTK----CARGSIILFADADGATK-FADLEKLEDKLKE  207 (569)
Q Consensus       168 ka~AlN~Gl~----~A~gd~Vv~lDaD~~~~-pd~L~~lv~~~~~  207 (569)
                      ||+|+|.-++    .+++++|+.+|+|.... ++.+++.+=.|.+
T Consensus       603 KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD  647 (1135)
T PLN02248        603 KAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMD  647 (1135)
T ss_pred             ccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheec
Confidence            9999999998    45899999999999865 5589998888876

>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase

Probab=97.11  E-value=0.014  Score=65.37  Aligned_cols=116  Identities=17%  Similarity=0.186  Sum_probs=87.0

Q ss_pred             CCCccEEEEEeecCC-CCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC-Ccc-----HHHHHHHHhHhhCCCeEEE
Q psy7267          87 EPSVNLSVIVPAYNE-QDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS-TDK-----TMQVVHQYTEKCGEDIVRG  159 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE-~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS-tD~-----T~eil~~~~~~~~~~~V~v  159 (569)
                      .....|.||||+.+. .+.+...++...+...+     +.++...+||..++ .|.     ..+.++++.++++..++.+
T Consensus       244 ~~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~-----~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~  318 (499)
T PF05679_consen  244 TESTRVHIIVPLSGREADWFRRFLENFEKVCLE-----TDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKW  318 (499)
T ss_pred             cCCCEEEEEEEecCccHHHHHHHHHHHHHHhcc-----cCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEE
Confidence            345789999999999 77777777766554332     23366667766655 332     2357788888887678999


Q ss_pred             EEcC-CCCChHHHHHHHHHhcc-CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         160 LKLL-KNRGKGGAVTLGTKCAR-GSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       160 i~~~-~n~Gka~AlN~Gl~~A~-gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                      +... .+..++.|+..|++... .++++++|.|..++++.|.+.-..-..
T Consensus       319 i~~~~~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~  368 (499)
T PF05679_consen  319 ISVKTGEFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRMNTIP  368 (499)
T ss_pred             EEecCCCccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHHhhhc
Confidence            9887 77889999999999764 579999999999999999997665443

Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane

>PLN02400 cellulose synthase

Probab=96.97  E-value=0.01  Score=70.42  Aligned_cols=52  Identities=19%  Similarity=0.161  Sum_probs=40.6

Q ss_pred             EEEEEcCCCCC-----hHHHHHHHHHh----ccCcEEEEEcCCCCC-ChhhHHHHHHHHHhc
Q psy7267         157 VRGLKLLKNRG-----KGGAVTLGTKC----ARGSIILFADADGAT-KFADLEKLEDKLKEL  208 (569)
Q Consensus       157 V~vi~~~~n~G-----ka~AlN~Gl~~----A~gd~Vv~lDaD~~~-~pd~L~~lv~~~~~~  208 (569)
                      +.++.++++.|     ||+|+|.-++.    +++.||+.+|.|-.. +++.+++.+=.|-+.
T Consensus       525 LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf~lD~  586 (1085)
T PLN02400        525 LVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDP  586 (1085)
T ss_pred             eEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhheecc
Confidence            33444445554     99999999995    479999999999877 788999888887764

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit

Probab=96.49  E-value=0.043  Score=65.13  Aligned_cols=41  Identities=17%  Similarity=0.141  Sum_probs=34.5

Q ss_pred             hHHHHHHHHHhc----cCcEEEEEcCCCCC-ChhhHHHHHHHHHhc
Q psy7267         168 KGGAVTLGTKCA----RGSIILFADADGAT-KFADLEKLEDKLKEL  208 (569)
Q Consensus       168 ka~AlN~Gl~~A----~gd~Vv~lDaD~~~-~pd~L~~lv~~~~~~  208 (569)
                      ||+|+|.-++.+    ++.||+.+|.|... +++.+++.+=.+-+.
T Consensus       472 KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r~AMCf~lD~  517 (1044)
T PLN02915        472 KAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDP  517 (1044)
T ss_pred             hhhhhhhHhhhhheeecCcEEEeeccccccCcchhhHhhceeeecC
Confidence            999999999986    78999999999865 677888877776653

>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase

Probab=96.46  E-value=0.087  Score=55.46  Aligned_cols=105  Identities=20%  Similarity=0.333  Sum_probs=68.8

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC---ccH---HHHHHHHhHhhCCCeEEEEEcC
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST---DKT---MQVVHQYTEKCGEDIVRGLKLL  163 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt---D~T---~eil~~~~~~~~~~~V~vi~~~  163 (569)
                      -+.+||||+.||.-   .+|+-+++.+       |. +.-||||.|.+.   |.-   .+.++.+..-- +..+-+++..
T Consensus        50 ~~maIVVP~KdE~l---~lleGVL~gI-------Ph-~c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t-~r~~i~vHQk  117 (381)
T TIGR02460        50 GKTAIVVPVKNEKL---HLLEGVLSGI-------PH-ECPIIIVSNSKREPPDRFKMEVDLIRHFSNLT-HRKIIIIHQK  117 (381)
T ss_pred             hCcEEEEEcCCCch---hHHhhHhhcC-------CC-CCeEEEEeCCCCCChhHHHHHHHHHHHHHHhh-cCceEEEEcC
Confidence            45899999999994   4577777753       33 567889988776   432   34444443321 1334444422


Q ss_pred             ----------------------CCCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         164 ----------------------KNRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       164 ----------------------~n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                                            -+-||+.++-.|+..|+   .+||-|+|||..++ .++.+-+..+..
T Consensus       118 Dp~la~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiP-GaV~EYvk~yAa  185 (381)
T TIGR02460       118 DPALAEAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFP-GAVNEYVKIYAA  185 (381)
T ss_pred             CHHHHHHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCC-chHHHHHHHHHh
Confidence                                  12589999999987764   59999999999775 555555555443

This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.

>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni []

Probab=96.41  E-value=0.012  Score=61.27  Aligned_cols=98  Identities=16%  Similarity=0.117  Sum_probs=74.1

Q ss_pred             cEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEE-------EcC
Q psy7267          91 NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGL-------KLL  163 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi-------~~~  163 (569)
                      .++-.|=+.||+.+|+++|+|++..+.           |.|+.=|.|||+|.|++.++.+++|+ -+.+.       .++
T Consensus        88 ~~~~~iRvKnE~~tl~~si~S~Lpai~-----------~gVI~yNdc~D~t~Eiil~fckkyP~-fip~~Ypy~v~~~n~  155 (347)
T PF06306_consen   88 NPWAFIRVKNEAMTLAESIESILPAID-----------EGVIGYNDCTDGTEEIILEFCKKYPS-FIPIKYPYEVIIKNP  155 (347)
T ss_pred             CcceEEEEcchhhhHHHHHHHHHHHHh-----------ccEEEeecCCCCHHHHHHHHHHhCcc-cccccCcchhhccCC
Confidence            478899999999999999999999854           67888888999999999999999963 22221       111


Q ss_pred             CC--CChHHHHHHHHHhc-cCcEEEEEcCCCCCChhhHHH
Q psy7267         164 KN--RGKGGAVTLGTKCA-RGSIILFADADGATKFADLEK  200 (569)
Q Consensus       164 ~n--~Gka~AlN~Gl~~A-~gd~Vv~lDaD~~~~pd~L~~  200 (569)
                      +.  -....=.|.++... +.+|++=+|+|-..+++.|-+
T Consensus       156 ~~~~n~l~~YYNy~ls~ipk~~w~iKID~DhIy~~~KL~k  195 (347)
T PF06306_consen  156 KSEENSLYNYYNYVLSFIPKNEWAIKIDADHIYDTKKLYK  195 (347)
T ss_pred             chhhhhhhhhhhhhhcccccceEEEEeccceeecHHHHhh
Confidence            11  12344456666664 689999999999998877533

>KOG3916|consensus

Probab=96.35  E-value=0.038  Score=57.91  Aligned_cols=152  Identities=14%  Similarity=0.200  Sum_probs=98.4

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      +.-+|+||||.+|.++.|.-.|.-+...+..|..     ++.|+||+-..++                         ...
T Consensus       149 ar~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL-----~y~iyVieQ~g~~-------------------------~FN  198 (372)
T KOG3916|consen  149 ARHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRL-----DYRIYVIEQAGNK-------------------------PFN  198 (372)
T ss_pred             ccceeEEEeecccHHHHHHHHHHHhhHHHHhhhh-----ceeEEEEEecCCC-------------------------ccc
Confidence            3457999999999999999999999999988877     6789988653322                         234


Q ss_pred             hHHHHHHHHHhcc----CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhH
Q psy7267         168 KGGAVTLGTKCAR----GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRS  243 (569)
Q Consensus       168 ka~AlN~Gl~~A~----gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~  243 (569)
                      +|.-+|.|+..|.    -|-++|=|.|..+..           +.                ....+.... .       .
T Consensus       199 RakL~NVGf~eAlkd~~wdCfIFHDVDllPen-----------Dr----------------NlY~C~~~P-R-------H  243 (372)
T KOG3916|consen  199 RAKLLNVGFLEALKDYGWDCFIFHDVDLLPEN-----------DR----------------NLYGCPEQP-R-------H  243 (372)
T ss_pred             HHHhhhhHHHHHHHhcCCCEEEEecccccccC-----------CC----------------CccCCCCCC-c-------c
Confidence            5667788887763    478999999976432           21                111111110 0       0


Q ss_pred             HHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCch---hhchHHHHHHHHcCCCEEEEE
Q psy7267         244 FFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW---AFDVELLFIAEVLHIPMAEVS  313 (569)
Q Consensus       244 ~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~---~~D~EL~~Ra~~~G~rI~~vP  313 (569)
                      +.-        .+.+.....+....-||..+++++-+.+| .+...+-|   ++|-||.-|...+|++|..-|
T Consensus       244 ~sv--------a~dk~gy~LPY~~~FGGVsalt~~qf~kI-NGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~  307 (372)
T KOG3916|consen  244 MSV--------ALDKFGYRLPYKEYFGGVSALTKEQFRKI-NGFSNAFWGWGGEDDDLWNRVQLAGMKISRPP  307 (372)
T ss_pred             hhh--------hhhhccccccchhhhCchhhccHHHHHHh-cCCCchhcccCCcchHHHHHHHhcCceeecCC
Confidence            000        01111111233333457779999999999 22222333   369999999999999998665

>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional

Probab=96.26  E-value=0.12  Score=54.70  Aligned_cols=105  Identities=21%  Similarity=0.340  Sum_probs=68.4

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC---ccH---HHHHHHHhHhhCCCeEEEEEcC
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST---DKT---MQVVHQYTEKCGEDIVRGLKLL  163 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt---D~T---~eil~~~~~~~~~~~V~vi~~~  163 (569)
                      -+.+||||+.||.-   .+|+-+++.+       |. +.-||||.|.+.   |.-   .+.++.+..-- +..+-+++..
T Consensus        51 ~~mAIVVP~KdE~l---~lleGVL~gI-------Ph-~c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t-~r~~i~vHQk  118 (393)
T PRK14503         51 GRMAIVVPVKNERL---KLLEGVLKGI-------PH-ECPIIVVSNSKREPPDRFKLEVDLVRHFYRLT-QRPIIIVHQK  118 (393)
T ss_pred             hCcEEEEEcCCCch---hHHhhHhhcC-------CC-CCeEEEEeCCCCCCchHHHHHHHHHHHHHhhh-cCceEEEEcC
Confidence            45899999999994   4577777753       33 567888888765   432   34444443321 1334444422


Q ss_pred             ----------------------CCCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         164 ----------------------KNRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       164 ----------------------~n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                                            -+-||+.++-.|+-.|+   .+||-|+|||..++ .++.+-+..+..
T Consensus       119 Dp~la~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiP-GaV~EYvk~yAA  186 (393)
T PRK14503        119 DPGLAEALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIP-GAVNEYVKIYAA  186 (393)
T ss_pred             CHHHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCC-chHHHHHHHHHh
Confidence                                  12589999999987764   59999999999775 555555554443

>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis

Probab=96.23  E-value=0.046  Score=57.75  Aligned_cols=105  Identities=21%  Similarity=0.344  Sum_probs=63.5

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC---ccH---HHHHHHHhHhhCCCeEEEEEcC
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST---DKT---MQVVHQYTEKCGEDIVRGLKLL  163 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt---D~T---~eil~~~~~~~~~~~V~vi~~~  163 (569)
                      -+.+||||+.||.   ...|+-+++.+       |. +.-||||.|.+.   |.-   .+.++++...- ...+-+++..
T Consensus        50 ~~maIVVP~KnE~---l~lleGVL~gI-------Ph-~C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t-~r~~~~vHQk  117 (381)
T PF09488_consen   50 SKMAIVVPCKNEK---LKLLEGVLSGI-------PH-DCLIIVVSNSSREPVDRFKMEVDLLKHFCRLT-RRQIIIVHQK  117 (381)
T ss_dssp             TTEEEEEEESS-----HHHHHHHHHCS--------T-TSEEEEEE---CSSSCHHHHHHHHHHHHHHHC-T--EEEEETT
T ss_pred             hCcEEEEECCCCc---hhhhhhhhhcC-------CC-CCeEEEEECCCCCCccHHHHHHHHHHHHHHhh-cCceEEEecC
Confidence            3589999999999   45678887753       33 678999999888   654   45555554432 1345555533


Q ss_pred             ----------------------CCCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         164 ----------------------KNRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       164 ----------------------~n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                                            -+-||+.++-.|+..|+   .+||-|+|||..+ |.++.+-+..+..
T Consensus       118 Dp~lA~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyi-PGaV~EYvk~yAA  185 (381)
T PF09488_consen  118 DPGLAEAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYI-PGAVNEYVKDYAA  185 (381)
T ss_dssp             -HHHHHHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS--HHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCC-cchHHHHHHHHHh
Confidence                                  13589999999988764   5999999999976 4555555555543

Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.

>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]

Probab=96.10  E-value=0.078  Score=53.80  Aligned_cols=109  Identities=15%  Similarity=0.028  Sum_probs=74.1

Q ss_pred             EEEEeecCCCCChHHHHH-HHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeE--EEEEcCCCC-C-
Q psy7267          93 SVIVPAYNEQDRLKPMLD-ETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIV--RGLKLLKNR-G-  167 (569)
Q Consensus        93 SVIIP~yNE~~~I~~~L~-sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V--~vi~~~~n~-G-  167 (569)
                      =|..-.||.++.|+.... ++++.+.....    ++.=|-|+++||+|+|.+.++++......-+|  .+...+... . 
T Consensus         3 fIA~~l~~~~~iL~~~~~~~ll~li~~LGp----~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~   78 (241)
T PF11735_consen    3 FIAANLYNNEDILPSLWGDALLELIRFLGP----ENVFVSIYESGSWDGTKEALRALDAELDALGVPHSIVLSDITHRDE   78 (241)
T ss_pred             EEEEEcccCHhHHHHHHHHHHHHHHHHhCc----CeEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCeEEEeCCCccccc
Confidence            344456899999987777 88777665442    36778899999999999999998744311111  111111110 0 


Q ss_pred             ------------hHHHHHHHHHhc---------cCcEEEEEcCCCCCChhhHHHHHHHHH
Q psy7267         168 ------------KGGAVTLGTKCA---------RGSIILFADADGATKFADLEKLEDKLK  206 (569)
Q Consensus       168 ------------ka~AlN~Gl~~A---------~gd~Vv~lDaD~~~~pd~L~~lv~~~~  206 (569)
                                  .+.-+|.|++--         ..|-|+|+| |....++++-+|+..-.
T Consensus        79 ~~~~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~  137 (241)
T PF11735_consen   79 IERPPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRN  137 (241)
T ss_pred             ccccchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcC
Confidence                        367788888742         237899999 88888888888877655

It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.

>PLN02436 cellulose synthase A

Probab=95.87  E-value=0.076  Score=63.19  Aligned_cols=41  Identities=17%  Similarity=0.156  Sum_probs=35.5

Q ss_pred             hHHHHHHHHHhc----cCcEEEEEcCCC-CCChhhHHHHHHHHHhc
Q psy7267         168 KGGAVTLGTKCA----RGSIILFADADG-ATKFADLEKLEDKLKEL  208 (569)
Q Consensus       168 ka~AlN~Gl~~A----~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~  208 (569)
                      ||+|+|..++.+    ++.||+.+|.|- .-+++.+++.+=.|-+.
T Consensus       550 KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~  595 (1094)
T PLN02436        550 KAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDP  595 (1094)
T ss_pred             hhhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhhhcCC
Confidence            999999999864    789999999998 45788999988888764

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals

Probab=95.05  E-value=0.063  Score=61.74  Aligned_cols=52  Identities=19%  Similarity=0.121  Sum_probs=40.5

Q ss_pred             EEEEEcCCCCC-----hHHHHHHHHHhc----cCcEEEEEcCCCC-CChhhHHHHHHHHHhc
Q psy7267         157 VRGLKLLKNRG-----KGGAVTLGTKCA----RGSIILFADADGA-TKFADLEKLEDKLKEL  208 (569)
Q Consensus       157 V~vi~~~~n~G-----ka~AlN~Gl~~A----~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~  208 (569)
                      +.++.++++.|     ||+|+|..++.+    ++++|+.+|.|.. -+|+.+++.+-.+.+.
T Consensus       168 lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~  229 (720)
T PF03552_consen  168 LVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDP  229 (720)
T ss_pred             EEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccC
Confidence            34444455555     999999998764    7899999999984 5688999988888774

The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane

>KOG3588|consensus

Probab=94.67  E-value=0.33  Score=51.58  Aligned_cols=188  Identities=13%  Similarity=0.101  Sum_probs=111.6

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC-CccH--HHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS-TDKT--MQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS-tD~T--~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ..|.|.+++|...+.........++...        +.++++++||-=|+ .|+-  .+.+..+.+++  +++..+....
T Consensus       227 ~~pgih~i~pl~gr~~~f~rf~q~~c~~--------~d~~l~l~vv~f~~se~e~ak~e~~tslra~f--~~~q~l~lng  296 (494)
T KOG3588|consen  227 EDPGIHMIMPLRGRAAIFARFAQSICAR--------GDDRLALSVVYFGYSEDEMAKRETITSLRASF--IPVQFLGLNG  296 (494)
T ss_pred             cCCCceEEEeccchHHHhhhhhHHHhcc--------CCCceEEEEEEecCCChHHHhhhHHHHHhhcC--CceEEecccc
Confidence            4567999999999988776666644332        33477877765444 4432  34555677777  6777777666


Q ss_pred             CCChHHHHHHHHHhccCc-EEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeec-c-------
Q psy7267         165 NRGKGGAVTLGTKCARGS-IILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHL-E-------  235 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A~gd-~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~-~-------  235 (569)
                      ....|.|+..|.+.-+.+ .+.|.|.|..+.-++|.+.-..-.               .|..+........ +       
T Consensus       297 eFSRa~aL~vGAe~~~~nvLLFfcDVDi~FT~efL~rcr~Nt~---------------~gkqiyfPivFS~ynp~ivy~~  361 (494)
T KOG3588|consen  297 EFSRAKALMVGAETLNANVLLFFCDVDIYFTTEFLNRCRLNTI---------------LGKQIYFPIVFSQYNPEIVYEQ  361 (494)
T ss_pred             hhhhhHHHHhhHHHhccceeEEEeccceeehHHHHHHHhhccC---------------CCceEEEEEEEeecCcceeecC
Confidence            677899999999998665 566789999988888877543221               2222222211110 0       


Q ss_pred             cccchhhHHHHHHhhhhhhhHhhhccccc-ccccccceeeEeHHHHHHHhccc--cCCchh-hchHHHHHHHHcCCCEEE
Q psy7267         236 ALANVQRSFFRNILMKGFHFIVWFTGVRT-IRDTQCGFKLFTRKSALQLFSSI--HVQRWA-FDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       236 ~~~~~~~~~~r~~~~~~~~~l~~~~~~~~-i~d~~~gf~lfrR~al~~I~~~~--~~e~~~-~D~EL~~Ra~~~G~rI~~  311 (569)
                      +...+..   ..+.         .....+ ..|.+-|..+.-|+-+.++ ++.  .-++|+ +|++|..+..+.|.++..
T Consensus       362 ~~~~p~e---~~~~---------~~~~tGfwRdfGfGmtc~yrsd~~~v-gGFD~~I~GWG~EDV~Ly~K~v~~~l~viR  428 (494)
T KOG3588|consen  362 DKPLPAE---QQLV---------IKKDTGFWRDFGFGMTCQYRSDFLTV-GGFDMEIKGWGGEDVDLYRKYVHSGLKVIR  428 (494)
T ss_pred             CCCCchh---Hhee---------eccccccccccCCceeEEeeccceee-cCcceeeeccCcchHHHHHHHHhcCcEEEe
Confidence            1111100   0000         000011 1222334444555555566 122  225776 699999999999999888


Q ss_pred             EE
Q psy7267         312 VS  313 (569)
Q Consensus       312 vP  313 (569)
                      .|
T Consensus       429 ~p  430 (494)
T KOG3588|consen  429 TP  430 (494)
T ss_pred             cC
Confidence            76

>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function

Probab=94.62  E-value=0.17  Score=51.13  Aligned_cols=89  Identities=12%  Similarity=0.063  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHhhhccCCCCceEEEE-EeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc---cCcE
Q psy7267         108 MLDETIEFLNERRKKIPTFKYEIIV-VSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA---RGSI  183 (569)
Q Consensus       108 ~L~sll~~l~~~~~~yp~~~~EIIV-VDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A---~gd~  183 (569)
                      ||.|+.+|..      +  ++..+| +|+.+.+.-.+.++++.+.+  ++++++..++ .....++..+++.+   .+++
T Consensus        47 ~LpSl~~QTd------~--dF~~lv~~~~~~P~~~~~rL~~l~~~~--p~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~  115 (234)
T PF11316_consen   47 CLPSLRAQTD------Q--DFTWLVLFDDDLPEPYRERLRDLLADY--PQFRIVFRPP-GPHRDAMRRAINAARRDGADP  115 (234)
T ss_pred             HhhHHHhccC------C--CeEEEEEECCCCCHHHHHHHHHHhccC--CCcEEEecCC-chHHHHHHHHHhhhccCCCCE
Confidence            5666666633      2  677776 66666777788899988887  6677776443 33666777776443   3465


Q ss_pred             EE--EEcCCCCCChhhHHHHHHHHHh
Q psy7267         184 IL--FADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       184 Vv--~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                      ++  .+|+|+-++.|+++++-+...+
T Consensus       116 ~~~~RLDdDDAl~~dFV~rlr~~a~~  141 (234)
T PF11316_consen  116 VLQFRLDDDDALHRDFVARLRRAAAD  141 (234)
T ss_pred             EEEEEECCcchhhHHHHHHHHHHHHh
Confidence            55  4599999999999999998864

>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases

Probab=93.98  E-value=0.54  Score=45.63  Aligned_cols=99  Identities=15%  Similarity=0.093  Sum_probs=60.1

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|.-+. ..|...++.+.+.    .      --+|+|+-+...+...+.+.+.. .++ ..+.+.......|.+.++..
T Consensus        23 ll~i~g~-pli~~~l~~l~~~----g------~~~v~vv~~~~~~~i~~~~~~~~-~~~-~~~~~~~~~~~~G~~~~l~~   89 (223)
T cd06915          23 LAPVAGR-PFLEYLLEYLARQ----G------ISRIVLSVGYLAEQIEEYFGDGY-RGG-IRIYYVIEPEPLGTGGAIKN   89 (223)
T ss_pred             ccEECCc-chHHHHHHHHHHC----C------CCEEEEEcccCHHHHHHHHcCcc-ccC-ceEEEEECCCCCcchHHHHH
Confidence            4555554 5566666665553    0      12677765543333333332110 011 23444554566888999999


Q ss_pred             HHHhccCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         175 GTKCARGSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                      |++....|.++++++|...+ ..+.++++.+.+
T Consensus        90 a~~~~~~~~~lv~~~D~~~~-~~~~~~l~~~~~  121 (223)
T cd06915          90 ALPKLPEDQFLVLNGDTYFD-VDLLALLAALRA  121 (223)
T ss_pred             HHhhcCCCCEEEEECCcccC-CCHHHHHHHHHh
Confidence            99988778899999999775 457787777754

WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.

>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B

Probab=93.60  E-value=0.38  Score=44.57  Aligned_cols=93  Identities=14%  Similarity=0.151  Sum_probs=65.4

Q ss_pred             EeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHH
Q psy7267          96 VPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTL  174 (569)
Q Consensus        96 IP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~  174 (569)
                      +|. +....|+.+++.+.+.    .      .-+|+|+-..  ++..+.+    ..   .+++++.++ ...|-..++-.
T Consensus        19 ~~i-~g~~li~~~l~~l~~~----~------~~~Ivvv~~~--~~~~~~~----~~---~~~~~v~~~~~~~G~~~sl~~   78 (160)
T PF12804_consen   19 LPI-GGKPLIERVLEALREA----G------VDDIVVVTGE--EEIYEYL----ER---YGIKVVVDPEPGQGPLASLLA   78 (160)
T ss_dssp             SEE-TTEEHHHHHHHHHHHH----T------ESEEEEEEST--HHHHHHH----TT---TTSEEEE-STSSCSHHHHHHH
T ss_pred             eeE-CCccHHHHHHHHhhcc----C------CceEEEecCh--HHHHHHH----hc---cCceEEEeccccCChHHHHHH
Confidence            555 6666677777666554    0      1278877665  3222222    22   356777655 46899999999


Q ss_pred             HHHhc-cCcEEEEEcCCCC-CChhhHHHHHHHHHhc
Q psy7267         175 GTKCA-RGSIILFADADGA-TKFADLEKLEDKLKEL  208 (569)
Q Consensus       175 Gl~~A-~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~  208 (569)
                      |++.. ..+.++++.+|.. ++++.++++++.+++.
T Consensus        79 a~~~~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~  114 (160)
T PF12804_consen   79 ALSQLPSSEPVLVLPCDQPFLSPELLRRLLEALEKS  114 (160)
T ss_dssp             HHHTSTTSSEEEEEETTETTS-HHHHHHHHHHHHHT
T ss_pred             HHHhcccCCCcEEEeCCccccCHHHHHHHHHHHhcc
Confidence            99999 8999999999995 6999999999999863

...

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=93.60  E-value=0.4  Score=55.30  Aligned_cols=105  Identities=15%  Similarity=0.258  Sum_probs=68.4

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC---ccH---HHHHHHHhHhhCCCeEEEEEcC
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST---DKT---MQVVHQYTEKCGEDIVRGLKLL  163 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt---D~T---~eil~~~~~~~~~~~V~vi~~~  163 (569)
                      -+..||||+.||.-   .+|+-+++.+       |. +.-||||.|.+.   |.-   .+.++.+..-- +..+-+++..
T Consensus        55 ~~~aivvp~k~e~~---~~~~gvl~~i-------p~-~c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~-~~~~~~vhq~  122 (694)
T PRK14502         55 KKMAIVLPIKDEDL---KVFEGVLSGI-------PH-DCLMIVISNSSKQEVDNFKNEKDIVNRFCRIT-HRQAIVVHQK  122 (694)
T ss_pred             hCcEEEEEcCCCch---hHHhhHhhcC-------CC-CCeEEEEeCCCCCchHHHHHHHHHHHHHHHhh-cCceEEEEcC
Confidence            45899999999994   4577777753       33 567888888775   432   34444443321 1334444422


Q ss_pred             ----------------------CCCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         164 ----------------------KNRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       164 ----------------------~n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                                            -+-||+.++-.|+..|+   .+||-|+|||..++ .++.+-+..+..
T Consensus       123 dp~~a~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~p-g~v~ey~~~yaa  190 (694)
T PRK14502        123 NPELANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIP-GAVWEYAKHFAT  190 (694)
T ss_pred             CHHHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCC-chHHHHHHHHHh
Confidence                                  13589999999988774   59999999999875 555555554443

>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A

Probab=93.54  E-value=0.16  Score=47.01  Aligned_cols=78  Identities=21%  Similarity=0.350  Sum_probs=54.5

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      +.-+++||||-+|.++.|...|..+...+..|..     .+.|+||+-..+                         ....
T Consensus        45 ~~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~-----~y~I~vieQ~~~-------------------------~~FN   94 (136)
T PF13733_consen   45 PRHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQL-----DYRIFVIEQVDN-------------------------GPFN   94 (136)
T ss_dssp             -S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEEEEEE-SS-------------------------S---
T ss_pred             cccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcc-----eEEEEEEeeccC-------------------------CCCc
Confidence            3458999999999999999999999988888765     788999865321                         1234


Q ss_pred             hHHHHHHHHHhc----cCcEEEEEcCCCCCCh
Q psy7267         168 KGGAVTLGTKCA----RGSIILFADADGATKF  195 (569)
Q Consensus       168 ka~AlN~Gl~~A----~gd~Vv~lDaD~~~~p  195 (569)
                      +|.-+|.|+..|    ..|.++|=|.|..+..
T Consensus        95 Rg~L~NvGf~eA~~~~~~dc~ifHDVDllP~~  126 (136)
T PF13733_consen   95 RGKLMNVGFLEALKDDDFDCFIFHDVDLLPEN  126 (136)
T ss_dssp             HHHHHHHHHHHHHHHS--SEEEEE-TTEEESB
T ss_pred             hhhhhhHHHHHHhhccCCCEEEEecccccccC
Confidence            666788888776    3589999999986543

...

>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch

Probab=93.44  E-value=1.6  Score=42.33  Aligned_cols=155  Identities=12%  Similarity=0.047  Sum_probs=92.1

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhC----CCeEEEEEc------CC
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG----EDIVRGLKL------LK  164 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~----~~~V~vi~~------~~  164 (569)
                      ++|+.|....|..+++.+.+.    .      --||+||-+...+.-.+.+.+.. .++    ..+++++..      +.
T Consensus        23 llpv~g~~pli~~~l~~l~~~----g------i~~iivv~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   91 (200)
T cd02508          23 AVPFGGRYRLIDFPLSNMVNS----G------IRNVGVLTQYKSRSLNDHLGSGK-EWDLDRKNGGLFILPPQQRKGGDW   91 (200)
T ss_pred             eeEECCeeeeHHHHHHHHHHC----C------CCEEEEEeCCChHHHHHHHhCCC-cccCCCCCCCEEEeCcccCCCCCc
Confidence            788888645777777777663    1      23788877654433333322110 010    123555531      33


Q ss_pred             CCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchh
Q psy7267         165 NRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQ  241 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~  241 (569)
                      ..|-+.|+..|....+   .|.++++.+|.. .+..+.++++...+.              +.++.+...          
T Consensus        92 ~~Gta~al~~a~~~i~~~~~~~~lv~~gD~v-~~~~~~~~l~~~~~~--------------~~~~t~~~~----------  146 (200)
T cd02508          92 YRGTADAIYQNLDYIERSDPEYVLILSGDHI-YNMDYREMLDFHIES--------------GADITVVYK----------  146 (200)
T ss_pred             ccCcHHHHHHHHHHHHhCCCCEEEEecCCEE-EecCHHHHHHHHHHc--------------CCCEEEEEh----------
Confidence            5789999999988763   578889999984 556788888877653              334443322          


Q ss_pred             hHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhcccc-CCchhhchHHHHHHHHcCCCEEEE
Q psy7267         242 RSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIH-VQRWAFDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       242 ~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~-~e~~~~D~EL~~Ra~~~G~rI~~v  312 (569)
                                                ..+|..+|+++++.++.+... .....+..|+.-.+... .++.-.
T Consensus       147 --------------------------~~~g~yi~~~~~~~~~l~~~~~~~~~~~~~d~i~~l~~~-~~v~~~  191 (200)
T cd02508         147 --------------------------ASMGIYIFSKDLLIELLEEDAADGSHDFGKDIIPAMLKK-LKIYAY  191 (200)
T ss_pred             --------------------------hcCEEEEEEHHHHHHHHHHHhccCcchhHHHHHHHHhcc-CcEEEE
Confidence                                      345788999999876633221 12223456777777666 355443

ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.

>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ]

Probab=93.27  E-value=2.3  Score=45.43  Aligned_cols=110  Identities=22%  Similarity=0.180  Sum_probs=74.1

Q ss_pred             EEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHH--H----------------HHHHHhHh--
Q psy7267          92 LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTM--Q----------------VVHQYTEK--  151 (569)
Q Consensus        92 VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~--e----------------il~~~~~~--  151 (569)
                      |=|.|..|-..+ ...+|.++.++.     .+| +++-|=|++-...++..  .                ....+...  
T Consensus         2 IFvsiasyRD~~-c~~Tl~~~~~~A-----~~P-~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~   74 (343)
T PF11397_consen    2 IFVSIASYRDPE-CAPTLKDLFARA-----TNP-ERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSA   74 (343)
T ss_pred             EEEEEeeecCch-HHHHHHHHHHhc-----CCC-ceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhccc
Confidence            567888888865 777888887763     244 46667677543322211  0                00111110  


Q ss_pred             ----------hCCCeEEEEEcC--CCCChHHHHHHHHHhccC-cEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         152 ----------CGEDIVRGLKLL--KNRGKGGAVTLGTKCARG-SIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       152 ----------~~~~~V~vi~~~--~n~Gka~AlN~Gl~~A~g-d~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                                ....+|++++.+  .-+|-..|++.+.+.-++ +|++.+|+...+.++|=+.+++.++..
T Consensus        75 ~~~~~~~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~~gE~y~LqiDSH~rF~~~WD~~li~~~~~~  144 (343)
T PF11397_consen   75 CAEWPDGALCLRSDQIRVIRVDASEARGPCWARYLAQKLYRGEDYYLQIDSHMRFVPGWDEILIEMLKSL  144 (343)
T ss_pred             ccccccccccccCCeEEEEEeCHHHCcChHHHHHHHHHHhCCCeEEEEEeccceeeccHHHHHHHHHHhc
Confidence                      112467777654  357889999999988775 799999999999999999999998875

>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU

Probab=93.20  E-value=0.73  Score=45.22  Aligned_cols=95  Identities=19%  Similarity=0.174  Sum_probs=63.5

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|+-+. ..|..+++++.+.      .    --+|++|-....    +.++++..+   .+++++..+...|.+.++..
T Consensus        20 l~~v~gk-pli~~~i~~l~~~------~----i~~i~iv~~~~~----~~i~~~~~~---~~~~~~~~~~~~g~~~ai~~   81 (229)
T cd02540          20 LHPLAGK-PMLEHVLDAARAL------G----PDRIVVVVGHGA----EQVKKALAN---PNVEFVLQEEQLGTGHAVKQ   81 (229)
T ss_pred             cceeCCc-cHHHHHHHHHHhC------C----CCeEEEEECCCH----HHHHHHhCC---CCcEEEECCCCCCCHHHHHH
Confidence            4565553 6666677666553      0    236666553222    233333222   35666766667899999999


Q ss_pred             HHHhcc--CcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         175 GTKCAR--GSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~--gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      |+....  .|.++++++|. .+.++.+.++++.+.+
T Consensus        82 a~~~~~~~~~~vli~~~D~p~~~~~~i~~l~~~~~~  117 (229)
T cd02540          82 ALPALKDFEGDVLVLYGDVPLITPETLQRLLEAHRE  117 (229)
T ss_pred             HHHhhccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence            998875  68999999998 4688999999988865

The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.

>PLN02917 CMP-KDO synthetase

Probab=92.92  E-value=2.7  Score=43.85  Aligned_cols=52  Identities=10%  Similarity=-0.007  Sum_probs=36.9

Q ss_pred             eEEEEEc--CCCCChHHHHHHHHHhcc--CcEEEEEcCCCC-CChhhHHHHHHHHHhc
Q psy7267         156 IVRGLKL--LKNRGKGGAVTLGTKCAR--GSIILFADADGA-TKFADLEKLEDKLKEL  208 (569)
Q Consensus       156 ~V~vi~~--~~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~  208 (569)
                      ++.++..  ....|-+.+ ..|++..+  .|+++++++|.. ++++.+.++++.+.+.
T Consensus       108 ~v~vi~~~~~~~~GT~~~-~~a~~~l~~~~d~Vlil~gD~PlI~~~tI~~li~~~~~~  164 (293)
T PLN02917        108 GADVIMTSESCRNGTERC-NEALKKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAA  164 (293)
T ss_pred             CCEEEeCCcccCCchHHH-HHHHHhccCCCCEEEEecCCcCCCCHHHHHHHHHHHHhc
Confidence            3444433  233565555 46776664  689999999986 6899999999988653

>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase

Probab=92.48  E-value=2.1  Score=43.07  Aligned_cols=28  Identities=14%  Similarity=0.144  Sum_probs=24.6

Q ss_pred             cCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         180 RGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       180 ~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      ..|+|+++|+|.- ++++.+.++++.+.+
T Consensus        87 ~~d~Vli~~gD~Pli~~~~I~~li~~~~~  115 (238)
T TIGR00466        87 DDERIVNLQGDEPFIPKEIIRQVADNLAT  115 (238)
T ss_pred             CCCEEEEEcCCcCcCCHHHHHHHHHHHhc
Confidence            5689999999986 799999999999854

>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars

Probab=92.38  E-value=0.84  Score=44.16  Aligned_cols=99  Identities=16%  Similarity=0.108  Sum_probs=61.4

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|+-+. ..|..+++++.+.-          --+|+++-+...+...+.+.+... + ...+.++..+...|.+.++..
T Consensus        23 ll~v~g~-pli~~~l~~l~~~g----------~~~i~vv~~~~~~~i~~~~~~~~~-~-~~~i~~~~~~~~~g~~~al~~   89 (217)
T cd04181          23 LLPIAGK-PILEYIIERLARAG----------IDEIILVVGYLGEQIEEYFGDGSK-F-GVNIEYVVQEEPLGTAGAVRN   89 (217)
T ss_pred             ccEECCe-eHHHHHHHHHHHCC----------CCEEEEEeccCHHHHHHHHcChhh-c-CceEEEEeCCCCCccHHHHHH
Confidence            4555554 66666776665530          226777765443333333322110 1 134666665556889999999


Q ss_pred             HHHhccCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         175 GTKCARGSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                      +++....+.++++++|...+.+ +.++++...+
T Consensus        90 ~~~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~  121 (217)
T cd04181          90 AEDFLGDDDFLVVNGDVLTDLD-LSELLRFHRE  121 (217)
T ss_pred             hhhhcCCCCEEEEECCeecCcC-HHHHHHHHHh
Confidence            9998877899999999987665 5556665554

Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.

>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function

Probab=92.13  E-value=0.96  Score=42.51  Aligned_cols=52  Identities=19%  Similarity=0.160  Sum_probs=41.4

Q ss_pred             eEEEEEcC-CCCChHHHHHHHHHhcc--CcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         156 IVRGLKLL-KNRGKGGAVTLGTKCAR--GSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       156 ~V~vi~~~-~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      .+.++..+ ...|...++..|++.+.  .|+++++.+|. .++++.+.++++.+.+
T Consensus        63 ~~~~~~~~~~~~G~~~~i~~al~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~  118 (186)
T cd04182          63 PVVVVINPDWEEGMSSSLAAGLEALPADADAVLILLADQPLVTAETLRALIDAFRE  118 (186)
T ss_pred             CeEEEeCCChhhCHHHHHHHHHHhccccCCEEEEEeCCCCCCCHHHHHHHHHHHHh
Confidence            35545533 23688899999999886  79999999998 5789999999988765

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production

Probab=90.48  E-value=3.9  Score=39.76  Aligned_cols=98  Identities=19%  Similarity=0.195  Sum_probs=58.2

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|. +....|..+++.+.+.    .     .--+|+||-+....   +..+.+........+.++..  ..|...++..
T Consensus        22 l~~i-~Gkpll~~~i~~l~~~----~-----~~~~ivVv~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~si~~   86 (218)
T cd02516          22 FLEL-GGKPVLEHTLEAFLAH----P-----AIDEIVVVVPPDDI---DLAKELAKYGLSKVVKIVEG--GATRQDSVLN   86 (218)
T ss_pred             eeEE-CCeEHHHHHHHHHhcC----C-----CCCEEEEEeChhHH---HHHHHHHhcccCCCeEEECC--chHHHHHHHH
Confidence            4454 4455566666655442    0     01267776543322   22222111110123444432  2357888999


Q ss_pred             HHHhc---cCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         175 GTKCA---RGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A---~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      |+++.   ..|+++++++|.. ++++.++++++.+.+
T Consensus        87 al~~~~~~~~~~vlv~~~D~P~i~~~~i~~li~~~~~  123 (218)
T cd02516          87 GLKALPDADPDIVLIHDAARPFVSPELIDRLIDALKE  123 (218)
T ss_pred             HHHhcccCCCCEEEEccCcCCCCCHHHHHHHHHHHhh
Confidence            99886   4789999999975 689999999998865

4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.

>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed

Probab=90.33  E-value=4.2  Score=39.05  Aligned_cols=51  Identities=16%  Similarity=0.057  Sum_probs=40.4

Q ss_pred             EEEEEcCC--CCChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         157 VRGLKLLK--NRGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       157 V~vi~~~~--n~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      ++++....  ..|...++..|++..+.|+++++++|. .++++.++++++.+.+
T Consensus        63 ~~~v~~~~~~~~g~~~~i~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~  116 (193)
T PRK00317         63 LPVIPDSLADFPGPLAGILAGLKQARTEWVLVVPCDTPFIPPDLVARLAQAAGK  116 (193)
T ss_pred             CcEEeCCCCCCCCCHHHHHHHHHhcCCCeEEEEcCCcCCCCHHHHHHHHHhhhc
Confidence            44554332  367778999999988889999999998 5689999999998754

>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide

Probab=90.25  E-value=2.1  Score=40.44  Aligned_cols=87  Identities=13%  Similarity=0.092  Sum_probs=59.6

Q ss_pred             EeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHH
Q psy7267          96 VPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTL  174 (569)
Q Consensus        96 IP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~  174 (569)
                      +|. +....|+.+++.+.+.           --+|+||-+...+.    ..    .   .+++++..+ ...|...++..
T Consensus        21 l~~-~g~~ll~~~i~~l~~~-----------~~~iivv~~~~~~~----~~----~---~~~~~v~~~~~~~G~~~si~~   77 (181)
T cd02503          21 LEL-GGKPLLEHVLERLKPL-----------VDEVVISANRDQER----YA----L---LGVPVIPDEPPGKGPLAGILA   77 (181)
T ss_pred             eEE-CCEEHHHHHHHHHHhh-----------cCEEEEECCCChHH----Hh----h---cCCcEeeCCCCCCCCHHHHHH
Confidence            344 4455666666666543           12677775433221    11    1   245566544 35788899999


Q ss_pred             HHHhccCcEEEEEcCCCC-CChhhHHHHHHHH
Q psy7267         175 GTKCARGSIILFADADGA-TKFADLEKLEDKL  205 (569)
Q Consensus       175 Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~  205 (569)
                      |++..+.|.++++++|.. ++++.+..+++.+
T Consensus        78 ~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~  109 (181)
T cd02503          78 ALRAAPADWVLVLACDMPFLPPELLERLLAAA  109 (181)
T ss_pred             HHHhcCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence            999988999999999995 6899999999887

The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.

>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=90.11  E-value=2.4  Score=47.10  Aligned_cols=98  Identities=13%  Similarity=0.089  Sum_probs=60.6

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|..+.. .|..+|+++.+.    .      .-+++++-....+...+.++    ... ..+.++..+...|.+.++..
T Consensus        26 llpi~gkp-li~~~l~~l~~~----g------~~~iivvv~~~~~~i~~~~~----~~~-~~~~~~~~~~~~Gt~~si~~   89 (482)
T PRK14352         26 LHTLAGRS-MLGHVLHAAAGL----A------PQHLVVVVGHDRERVAPAVA----ELA-PEVDIAVQDEQPGTGHAVQC   89 (482)
T ss_pred             eceeCCcc-HHHHHHHHHHhc----C------CCcEEEEECCCHHHHHHHhh----ccC-CccEEEeCCCCCCcHHHHHH
Confidence            55665543 566666666543    1      22566555432232222222    111 23555554556788889999


Q ss_pred             HHHhcc---CcEEEEEcCCC-CCChhhHHHHHHHHHhc
Q psy7267         175 GTKCAR---GSIILFADADG-ATKFADLEKLEDKLKEL  208 (569)
Q Consensus       175 Gl~~A~---gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~  208 (569)
                      |++...   .+.++++++|. .++++.+.++++.+.+.
T Consensus        90 al~~l~~~~~~~vlV~~gD~P~~~~~~l~~li~~~~~~  127 (482)
T PRK14352         90 ALEALPADFDGTVVVTAGDVPLLDGETLADLVATHTAE  127 (482)
T ss_pred             HHHHhccCCCCeEEEEeCCeeccCHHHHHHHHHHHHhc
Confidence            988764   37899999998 57889999999987653

>PLN02458 transferase, transferring glycosyl groups

Probab=89.98  E-value=1.8  Score=45.56  Aligned_cols=101  Identities=14%  Similarity=0.114  Sum_probs=61.1

Q ss_pred             CccEEEEEeecCC-CCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC-CccHHHHHHHHhHhhCCCeEEEEEcCCCC
Q psy7267          89 SVNLSVIVPAYNE-QDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS-TDKTMQVVHQYTEKCGEDIVRGLKLLKNR  166 (569)
Q Consensus        89 ~p~VSVIIP~yNE-~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS-tD~T~eil~~~~~~~~~~~V~vi~~~~n~  166 (569)
                      .+.|-||-|+|.. .... .-|..+...+....+     ++.-|||+|+. ++.|.+++++..-.     .+.+..++|.
T Consensus       111 ~rlIivVTPTY~rR~~Q~-a~LTRLahTL~lVp~-----pL~WIVVEd~~~t~~va~lLrrsGl~-----y~HL~~k~~~  179 (346)
T PLN02458        111 RRLVIIVTPISTKDRYQG-VLLRRLANTLRLVPP-----PLLWIVVEGQSDSEEVSEMLRKTGIM-----YRHLVFKENF  179 (346)
T ss_pred             CceEEEECCCCCCcchhH-HHHHHHHHHHhcCCC-----CceEEEEeCCCCCHHHHHHHHHcCCc-----eEEeccCCCC
Confidence            3458899999983 3332 334555554443321     57889999876 34455555553211     1222223332


Q ss_pred             -----ChHHHHHHHHHhccC----cEEEEEcCCCCCChhhHHH
Q psy7267         167 -----GKGGAVTLGTKCARG----SIILFADADGATKFADLEK  200 (569)
Q Consensus       167 -----Gka~AlN~Gl~~A~g----d~Vv~lDaD~~~~pd~L~~  200 (569)
                           .....+|.|+++.+.    -+|.|.|.|...+-+..++
T Consensus       180 ~~~~~r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeE  222 (346)
T PLN02458        180 TDPEAELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDE  222 (346)
T ss_pred             CCccchhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHH
Confidence                 124569999998753    5888999999888666555

>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function

Probab=89.86  E-value=1.1  Score=45.53  Aligned_cols=104  Identities=21%  Similarity=0.247  Sum_probs=70.2

Q ss_pred             EEEEE-eecC-CCC--ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC----
Q psy7267          92 LSVIV-PAYN-EQD--RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL----  163 (569)
Q Consensus        92 VSVII-P~yN-E~~--~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~----  163 (569)
                      ++|.+ |.|. |.+  .+.+.|+-...+    .      --.+++-|+++++.+.++++.+.+.   ..|+++.-+    
T Consensus         3 ~~vCv~pl~~~~~~~~~l~e~ie~~~~~----G------~~~~~~Y~~~~~~~~~~vL~~Y~~~---g~v~~~~w~~~~~   69 (285)
T PF01697_consen    3 FVVCVSPLFGNEDDWLQLIEWIEYHRLL----G------VDHFYFYDNSSSPSVRKVLKEYERS---GYVEVIPWPLRPK   69 (285)
T ss_pred             EEEEccchhcccccHHHHHHHHHHHHHh----C------CCEEEEEEccCCHHHHHhHHHHhhc---CeEEEEEcccccc
Confidence            55665 6665 433  344444443332    1      3367788888999999999998765   467776654    


Q ss_pred             ----------C-----CCChHHHHHHHHHhcc--CcEEEEEcCCCCCChhh----HHHHHHHHHhc
Q psy7267         164 ----------K-----NRGKGGAVTLGTKCAR--GSIILFADADGATKFAD----LEKLEDKLKEL  208 (569)
Q Consensus       164 ----------~-----n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~~~~pd~----L~~lv~~~~~~  208 (569)
                                .     ..|...|.|..+...+  .+|++++|.|..+-|..    ...+.+.+++.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE~lvP~~~~~~~~~~~~~l~~~  135 (285)
T PF01697_consen   70 FPDFPSPFPDPNSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDEFLVPTNAPTYPEEFEDLLREF  135 (285)
T ss_pred             cCCcccchhhhhhHHHHHHHHHHHHHHHHHhhhhceEEEEeccccEEEeccccchhhHHHHHHhhc
Confidence                      1     1356778888888775  58999999999876655    66666666664

The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.

>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

Probab=89.00  E-value=3.8  Score=41.10  Aligned_cols=99  Identities=17%  Similarity=0.186  Sum_probs=62.0

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC--CccHHHHHHHHhHhhCCCeEEEEEcCCC--
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS--TDKTMQVVHQYTEKCGEDIVRGLKLLKN--  165 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS--tD~T~eil~~~~~~~~~~~V~vi~~~~n--  165 (569)
                      |.|-||-|+|.......+. ..+...+...    |  ++.-|||+|+.  ++.|.+++++..-.|    .++. .+.+  
T Consensus         1 p~i~vVTPTy~R~~Q~~~L-tRLa~TL~lV----p--~l~WIVVEd~~~~t~~va~lL~~sgl~y----~HL~-~~~~~~   68 (223)
T cd00218           1 PTIYVVTPTYARPVQKAEL-TRLAHTLRLV----P--PLHWIVVEDSEEKTPLVAELLRRSGLMY----THLN-AKTPSD   68 (223)
T ss_pred             CeEEEECCCCccchhhHHH-HHHHHHHhcC----C--ceEEEEEeCCCCCCHHHHHHHHHcCCce----EEec-cCCCCC
Confidence            3478899999888765553 3343333322    2  78899999987  455666666632211    2221 1212  


Q ss_pred             -----CChHHHHHHHHHhccC-------cEEEEEcCCCCCChhhHHH
Q psy7267         166 -----RGKGGAVTLGTKCARG-------SIILFADADGATKFADLEK  200 (569)
Q Consensus       166 -----~Gka~AlN~Gl~~A~g-------d~Vv~lDaD~~~~pd~L~~  200 (569)
                           ..-...+|.|+++.+.       -+|.|.|.|...+-+.+++
T Consensus        69 ~~~~~~rg~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~e  115 (223)
T cd00218          69 PTWLKPRGVEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEE  115 (223)
T ss_pred             cccCCcccHHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHH
Confidence                 1134679999987642       4788999999988766666

Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).

>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family

Probab=88.73  E-value=2.8  Score=39.71  Aligned_cols=95  Identities=16%  Similarity=0.214  Sum_probs=60.1

Q ss_pred             EeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC-CCChHHHHHH
Q psy7267          96 VPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK-NRGKGGAVTL  174 (569)
Q Consensus        96 IP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~-n~Gka~AlN~  174 (569)
                      +|. +....|...++.+.+.      .    .-+|+||-+...+   ++.+++..+   .++.++..+. ..|...++..
T Consensus        20 l~~-~g~pll~~~i~~l~~~------~----~~~iivv~~~~~~---~~~~~~~~~---~~v~~v~~~~~~~g~~~si~~   82 (188)
T TIGR03310        20 LPY-KGKTILEHVVDNALRL------F----FDEVILVLGHEAD---ELVALLANH---SNITLVHNPQYAEGQSSSIKL   82 (188)
T ss_pred             ccc-CCeeHHHHHHHHHHHc------C----CCcEEEEeCCcHH---HHHHHhccC---CCeEEEECcChhcCHHHHHHH
Confidence            344 3455566666665543      0    2266666443222   233333322   3566666442 3578888999


Q ss_pred             HHH-hccCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         175 GTK-CARGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~-~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      |++ ....|.++++++|.. ++++.++++++.+.+
T Consensus        83 ~l~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~  117 (188)
T TIGR03310        83 GLELPVQSDGYLFLLGDQPFVTPDIIQLLLEAFAL  117 (188)
T ss_pred             HhcCCCCCCEEEEEeCCcCCCCHHHHHHHHHHHHh
Confidence            988 456799999999984 689999999998765

Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.

>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB

Probab=87.93  E-value=5.1  Score=38.33  Aligned_cols=95  Identities=14%  Similarity=0.087  Sum_probs=59.3

Q ss_pred             CCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC-CCChHHHHHHHHHh
Q psy7267         100 NEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK-NRGKGGAVTLGTKC  178 (569)
Q Consensus       100 NE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~-n~Gka~AlN~Gl~~  178 (569)
                      +....|+.+++..++.      .    --+|+||-+.. ++..+.+.+.....  .++.++.++. ..|.+.++..|+++
T Consensus        24 ~g~~ll~~~i~~~~~~------~----~~~i~vv~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~G~~~si~~gl~~   90 (190)
T TIGR03202        24 GETTLGSASLKTALSS------R----LSKVIVVIGEK-YAHLSWLDPYLLAD--ERIMLVCCRDACEGQAHSLKCGLRK   90 (190)
T ss_pred             CCccHHHHHHHHHHhC------C----CCcEEEEeCCc-cchhhhhhHhhhcC--CCeEEEECCChhhhHHHHHHHHHHH
Confidence            4555566666555442      0    23678876543 32222222221111  3455554333 35788899999998


Q ss_pred             c---cCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         179 A---RGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       179 A---~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      +   ..|+++++++|.. ++++.+.++++.+.+
T Consensus        91 ~~~~~~d~vlv~~~D~P~v~~~~i~~L~~~~~~  123 (190)
T TIGR03202        91 AEAMGADAVVILLADQPFLTADVINALLALAKR  123 (190)
T ss_pred             hccCCCCeEEEEeCCCCCCCHHHHHHHHHHHhh
Confidence            6   4799999999985 688999999998765

In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.

>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=87.67  E-value=12  Score=41.11  Aligned_cols=94  Identities=11%  Similarity=0.062  Sum_probs=58.4

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|..+ ...|+..++++.+.    .      .-+|++|-....|    .++++...   ..++++..+...|-+.++..
T Consensus        27 l~~i~g-kpli~~~l~~l~~~----~------~~~iivv~~~~~~----~i~~~~~~---~~~~~v~~~~~~Gt~~al~~   88 (456)
T PRK14356         27 LQTLLG-EPMLRFVYRALRPL----F------GDNVWTVVGHRAD----MVRAAFPD---EDARFVLQEQQLGTGHALQC   88 (456)
T ss_pred             ecccCC-CcHHHHHHHHHHhc----C------CCcEEEEECCCHH----HHHHhccc---cCceEEEcCCCCCcHHHHHH
Confidence            444443 44555566655432    1      1257666443222    23332221   35666766666788888888


Q ss_pred             HHHhcc---CcEEEEEcCCC-CCChhhHHHHHHHHH
Q psy7267         175 GTKCAR---GSIILFADADG-ATKFADLEKLEDKLK  206 (569)
Q Consensus       175 Gl~~A~---gd~Vv~lDaD~-~~~pd~L~~lv~~~~  206 (569)
                      +++...   .|.++++++|. .++++.++++++...
T Consensus        89 a~~~l~~~~~d~vlv~~gD~P~i~~~~i~~li~~~~  124 (456)
T PRK14356         89 AWPSLTAAGLDRVLVVNGDTPLVTTDTIDDFLKEAA  124 (456)
T ss_pred             HHHHHhhcCCCcEEEEeCCcccCCHHHHHHHHHHHh
Confidence            877653   58999999998 578899999988754

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=87.58  E-value=5.4  Score=38.59  Aligned_cols=164  Identities=13%  Similarity=0.047  Sum_probs=85.1

Q ss_pred             CceEEEEEeCCCC--ccH-HHHHHHHhHhhCCCeEEEEEcCCC---CC--hHHHHHHHHHhcc-CcEEEEEcCCCCCChh
Q psy7267         126 FKYEIIVVSDGST--DKT-MQVVHQYTEKCGEDIVRGLKLLKN---RG--KGGAVTLGTKCAR-GSIILFADADGATKFA  196 (569)
Q Consensus       126 ~~~EIIVVDDgSt--D~T-~eil~~~~~~~~~~~V~vi~~~~n---~G--ka~AlN~Gl~~A~-gd~Vv~lDaD~~~~pd  196 (569)
                      ..++++.+-..+.  |.. .+.+++=.+++  ..+......+.   ..  -..+++.+.+++. .+||+.+|.|..+.++
T Consensus        19 ~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y--~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~~~~v~k~DDD~~vn~~   96 (195)
T PF01762_consen   19 VRVKVVFVVGESPNSDSDLQEALQEEAEKY--GDILQGDFVDSYRNLTLKTLAGLKWASKHCPNAKYVLKVDDDVFVNPD   96 (195)
T ss_pred             CcEEEEEEEecCCCCcHHHHHHhhhhhhhc--CceEeeecccccchhhHHHHHHHHHHHhhCCchhheeecCcEEEEehH
Confidence            3677777766665  433 33343323344  44555544333   22  3467777777776 7999999999999988


Q ss_pred             hHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhhhhHhhhcccccccccccceeeEe
Q psy7267         197 DLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFT  276 (569)
Q Consensus       197 ~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfr  276 (569)
                      .|.+.+......             .....+.|...... ... .....+......  .   .....-.....|++.+++
T Consensus        97 ~l~~~L~~~~~~-------------~~~~~~~g~~~~~~-~~~-r~~~~kw~v~~~--~---y~~~~yP~y~~G~~yvls  156 (195)
T PF01762_consen   97 RLVSFLKSLKQD-------------PSKNSIYGGCIKNG-PPI-RDPSSKWYVSEE--E---YPDDYYPPYCSGGGYVLS  156 (195)
T ss_pred             HhhhhhhhcccC-------------ccccccccccccCC-ccc-cccccCceeeee--e---cccccCCCcCCCCeEEec
Confidence            877777666111             11123333222110 000 000000000000  0   000001122345677999


Q ss_pred             HHHHHHHhccccC-C-chhhchHHHHHHHHcCCCEEE
Q psy7267         277 RKSALQLFSSIHV-Q-RWAFDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       277 R~al~~I~~~~~~-e-~~~~D~EL~~Ra~~~G~rI~~  311 (569)
                      +++++.+...... . -..+|+-+..-+.+.|.+...
T Consensus       157 ~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~~  193 (195)
T PF01762_consen  157 SDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPIH  193 (195)
T ss_pred             HHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCccC
Confidence            9999999332221 2 223588888888888876543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional

Probab=87.42  E-value=12  Score=37.12  Aligned_cols=28  Identities=11%  Similarity=0.203  Sum_probs=24.3

Q ss_pred             cCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         180 RGSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       180 ~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      ..+.++++++|. .++++.+.++++.+..
T Consensus        90 ~~~~vlv~~~D~Pli~~~~l~~li~~~~~  118 (245)
T PRK05450         90 DDDIVVNVQGDEPLIPPEIIDQVAEPLAN  118 (245)
T ss_pred             CCCEEEEecCCCCCCCHHHHHHHHHHHhc
Confidence            468999999999 6799999999998765

>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial

Probab=86.79  E-value=4.4  Score=38.41  Aligned_cols=51  Identities=14%  Similarity=0.057  Sum_probs=41.8

Q ss_pred             EEEEEcC--CCCChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         157 VRGLKLL--KNRGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       157 V~vi~~~--~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      ++++...  ...|...++..|++..+.|+++++++|. .++++.++++++.+.+
T Consensus        62 ~~~i~~~~~~~~g~~~si~~al~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~  115 (186)
T TIGR02665        62 LPVVPDALADFPGPLAGILAGLRWAGTDWVLTVPCDTPFLPEDLVARLAAALEA  115 (186)
T ss_pred             CcEEecCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCcCCHHHHHHHHHHhhc
Confidence            4555542  3478899999999988889999999998 5799999999998865

In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.

>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional

Probab=86.20  E-value=7.9  Score=38.38  Aligned_cols=95  Identities=14%  Similarity=0.137  Sum_probs=55.9

Q ss_pred             CCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhC--CCeEEEEEcCCCCChHHHHHHHHH
Q psy7267         100 NEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG--EDIVRGLKLLKNRGKGGAVTLGTK  177 (569)
Q Consensus       100 NE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~--~~~V~vi~~~~n~Gka~AlN~Gl~  177 (569)
                      +....|..+++.+.+.        +. --+|+||-+..   ....++++..+++  ..++.++..  ..+...++..|++
T Consensus        28 ~gkpll~~~i~~~~~~--------~~-~~~ivVv~~~~---~~~~~~~~~~~~~~~~~~~~~v~~--g~~r~~sv~~gl~   93 (230)
T PRK13385         28 VGEPIFIHALRPFLAD--------NR-CSKIIIVTQAQ---ERKHVQDLMKQLNVADQRVEVVKG--GTERQESVAAGLD   93 (230)
T ss_pred             CCeEHHHHHHHHHHcC--------CC-CCEEEEEeChh---hHHHHHHHHHhcCcCCCceEEcCC--CchHHHHHHHHHH
Confidence            4555666666665542        00 22566665432   2222222222221  124555532  2345688888888


Q ss_pred             hcc-CcEEEEEcCCCC-CChhhHHHHHHHHHhc
Q psy7267         178 CAR-GSIILFADADGA-TKFADLEKLEDKLKEL  208 (569)
Q Consensus       178 ~A~-gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~  208 (569)
                      ... .|+++++|+|.. ++++.+.++++.+.+.
T Consensus        94 ~~~~~d~vli~~~d~P~i~~~~i~~li~~~~~~  126 (230)
T PRK13385         94 RIGNEDVILVHDGARPFLTQDIIDRLLEGVAKY  126 (230)
T ss_pred             hccCCCeEEEccCCCCCCCHHHHHHHHHHHhhC
Confidence            763 578999999985 6899999999988763

>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety

Probab=86.16  E-value=11  Score=36.50  Aligned_cols=41  Identities=7%  Similarity=0.062  Sum_probs=33.7

Q ss_pred             ChHHHHHHHHHhcc-----CcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         167 GKGGAVTLGTKCAR-----GSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       167 Gka~AlN~Gl~~A~-----gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      |...++..|++...     .|+++++++|.. +.++.+.++++.+.+
T Consensus        79 ~~~~~i~~~l~~l~~~~~~~d~vlv~~~D~P~i~~~~i~~~i~~~~~  125 (223)
T cd02513          79 SSIDVILHALDQLEELGRDFDIVVLLQPTSPLRSAEDIDEAIELLLS  125 (223)
T ss_pred             CcHHHHHHHHHHHHHhCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHh
Confidence            56777888887653     389999999985 689999999999876

CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.

>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins

Probab=86.11  E-value=3.6  Score=40.73  Aligned_cols=99  Identities=16%  Similarity=0.186  Sum_probs=59.6

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEE--cCCCCChHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLK--LLKNRGKGGAV  172 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~--~~~n~Gka~Al  172 (569)
                      ++|+-+. ..|...++++.++    .      --+|+||-....+...+.+.++...   .++.++.  .....|-+.|+
T Consensus        25 llpv~g~-pli~~~l~~l~~~----g------~~~v~iv~~~~~~~~~~~l~~~~~~---~~~~i~~~~~~~~~G~~~al   90 (233)
T cd06425          25 LVEFCNK-PMIEHQIEALAKA----G------VKEIILAVNYRPEDMVPFLKEYEKK---LGIKITFSIETEPLGTAGPL   90 (233)
T ss_pred             cCeECCc-chHHHHHHHHHHC----C------CcEEEEEeeeCHHHHHHHHhccccc---CCeEEEeccCCCCCccHHHH
Confidence            5566665 5677777766653    1      1256666554444444444433212   2344433  34457888999


Q ss_pred             HHHHHhccC--cEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         173 TLGTKCARG--SIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       173 N~Gl~~A~g--d~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      ..|....+.  +-++++++|...+.+ +..+++..++.
T Consensus        91 ~~a~~~~~~~~~~~lv~~~D~~~~~~-~~~~~~~~~~~  127 (233)
T cd06425          91 ALARDLLGDDDEPFFVLNSDVICDFP-LAELLDFHKKH  127 (233)
T ss_pred             HHHHHHhccCCCCEEEEeCCEeeCCC-HHHHHHHHHHc
Confidence            999887753  446777999876655 67888877653

GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.

>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum

Probab=86.00  E-value=9.7  Score=39.98  Aligned_cols=114  Identities=12%  Similarity=0.134  Sum_probs=69.3

Q ss_pred             CccEEEEEeec--CCCCChHHHHHHHHHHHHhhhccCCCCceEEE-EEeCCCCccHHHHHHHHhHhhC----CCeEEEEE
Q psy7267          89 SVNLSVIVPAY--NEQDRLKPMLDETIEFLNERRKKIPTFKYEII-VVSDGSTDKTMQVVHQYTEKCG----EDIVRGLK  161 (569)
Q Consensus        89 ~p~VSVIIP~y--NE~~~I~~~L~sll~~l~~~~~~yp~~~~EII-VVDDgStD~T~eil~~~~~~~~----~~~V~vi~  161 (569)
                      .+++.|=||+-  ..+..|.++|.|+++.+.+...    ...-|+ .+-|-..+.-...++++..+++    ...+.+|.
T Consensus        51 ~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er----~~i~IvVllAd~Dp~~~~~~~~~i~~~f~~~i~sG~l~VI~  126 (297)
T PF04666_consen   51 GKKLCIGIPTVKREKESYLLDTLASLLDGLSPEER----KDIVIVVLLADTDPDYHPSVAQNISTRFADHIESGLLEVIS  126 (297)
T ss_pred             CCeEEEEecccccCCCchHHHHHHHHHHhCCHHHh----cCeEEEEEecCCChhhhHHHHHHHHHHhHHHHHhCceEEEe
Confidence            34599999984  4557799999999998765321    122222 2334333333444444433321    12344554


Q ss_pred             cCC--------------------------CCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         162 LLK--------------------------NRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       162 ~~~--------------------------n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      .+.                          |.-.+..++.+  +..++|.+.+..|....|+++.++.+.+...
T Consensus       127 ~p~~~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~--~~~~~YyL~LEDDVia~~~f~~~i~~~v~~~  197 (297)
T PF04666_consen  127 PPPSYYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYC--QNLGDYYLQLEDDVIAAPGFLSRIKRFVEAW  197 (297)
T ss_pred             cccccCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHH--HhcCCeEEEecCCeEechhHHHHHHHHHHHh
Confidence            321                          11223334433  3468999999999999999999999998875

N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane

>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat

Probab=85.81  E-value=7.2  Score=38.60  Aligned_cols=97  Identities=11%  Similarity=0.115  Sum_probs=56.3

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      +.|. +....+..+++.+.+.      ..   --+|+|+-+.... . +.++++...   .+++++..+...+.+ ....
T Consensus        18 ll~l-~Gkpli~~~i~~l~~~------~~---~~~ivVv~~~~~~-~-~~i~~~~~~---~~v~~v~~~~~~~l~-~~~~   81 (233)
T cd02518          18 LKPL-GGKPLLEHLLDRLKRS------KL---IDEIVIATSTNEE-D-DPLEALAKK---LGVKVFRGSEEDVLG-RYYQ   81 (233)
T ss_pred             cccc-CCccHHHHHHHHHHhC------CC---CCeEEEECCCCcc-c-HHHHHHHHH---cCCeEEECCchhHHH-HHHH
Confidence            4443 4455666666666543      00   1257776554431 1 122222222   346677655433222 2333


Q ss_pred             HHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         175 GTKCARGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      +++....|+++++++|.. ++++.++++++.+.+
T Consensus        82 ~~~~~~~d~vli~~~D~P~i~~~~i~~li~~~~~  115 (233)
T cd02518          82 AAEEYNADVVVRITGDCPLIDPEIIDAVIRLFLK  115 (233)
T ss_pred             HHHHcCCCEEEEeCCCCCCCCHHHHHHHHHHHHh
Confidence            455556799999999985 689999999998876

Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.

>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase

Probab=85.41  E-value=7.2  Score=38.41  Aligned_cols=99  Identities=11%  Similarity=0.087  Sum_probs=58.0

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|+-+. ..|...++++.+.    .      --+|+||-....+...+.+++.. .++ ..+.++......|.+.++..
T Consensus        25 l~~i~g~-~li~~~l~~l~~~----~------~~~i~vv~~~~~~~~~~~~~~~~-~~~-~~i~~~~~~~~~g~~~sl~~   91 (236)
T cd04189          25 LIPVAGK-PIIQYAIEDLREA----G------IEDIGIVVGPTGEEIKEALGDGS-RFG-VRITYILQEEPLGLAHAVLA   91 (236)
T ss_pred             eeEECCc-chHHHHHHHHHHC----C------CCEEEEEcCCCHHHHHHHhcchh-hcC-CeEEEEECCCCCChHHHHHH
Confidence            5666554 6666666666553    1      22677776553333333333211 111 24556655556788999999


Q ss_pred             HHHhccCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         175 GTKCARGSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                      |......+-++++.+|...+.+ +.++++.+..
T Consensus        92 a~~~i~~~~~li~~~D~~~~~~-~~~~~~~~~~  123 (236)
T cd04189          92 ARDFLGDEPFVVYLGDNLIQEG-ISPLVRDFLE  123 (236)
T ss_pred             HHHhcCCCCEEEEECCeecCcC-HHHHHHHHHh
Confidence            9988753445558899888665 5556665544

This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in

>COG2068 Uncharacterized MobA-related protein [General function prediction only]

Probab=85.27  E-value=6.1  Score=38.99  Aligned_cols=94  Identities=12%  Similarity=0.119  Sum_probs=67.8

Q ss_pred             ecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC-CCChHHHHHHHH
Q psy7267          98 AYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK-NRGKGGAVTLGT  176 (569)
Q Consensus        98 ~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~-n~Gka~AlN~Gl  176 (569)
                      -++....+..+++..++.      .    --+||||-.+-   ..+..+++.+.   .+++++.+++ ..|.+..+..|+
T Consensus        27 p~~g~plv~~~~~~a~~a------~----~~~vivV~g~~---~~~~~~a~~~~---~~~~~v~npd~~~Gls~Sl~ag~   90 (199)
T COG2068          27 PLDGKPLVRASAETALSA------G----LDRVIVVTGHR---VAEAVEALLAQ---LGVTVVVNPDYAQGLSTSLKAGL   90 (199)
T ss_pred             ccCCCcHHHHHHHHHHhc------C----CCeEEEEeCcc---hhhHHHhhhcc---CCeEEEeCcchhhhHhHHHHHHH
Confidence            344555566666666653      1    22788886654   33333443332   4688888765 589999999999


Q ss_pred             HhccCc--EEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         177 KCARGS--IILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       177 ~~A~gd--~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      +++.++  .++++-+|.. +.++.+.++++.+..
T Consensus        91 ~a~~~~~~~v~~~lgDmP~V~~~t~~rl~~~~~~  124 (199)
T COG2068          91 RAADAEGDGVVLMLGDMPQVTPATVRRLIAAFRA  124 (199)
T ss_pred             HhcccCCCeEEEEeCCCCCCCHHHHHHHHHhccc
Confidence            999765  9999999986 899999999999987

>KOG3917|consensus

Probab=84.99  E-value=5.2  Score=40.10  Aligned_cols=151  Identities=18%  Similarity=0.202  Sum_probs=90.3

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      ...++.|++|.++.-+.+.+.+.-+.+.+..+..     ...|+|++.  .|                +.       +..
T Consensus        72 S~HklavlVPfRdRfEELl~FvPHM~~FL~rq~v-----~HHI~vlNQ--vD----------------~f-------RFN  121 (310)
T KOG3917|consen   72 SYHKLAVLVPFRDRFEELLEFVPHMSKFLHRQNV-----SHHILVLNQ--VD----------------PF-------RFN  121 (310)
T ss_pred             cceeEEEEechHHHHHHHHHhhHHHHHHHhhcCc-----ceEEEEeec--cC----------------cc-------eec
Confidence            4568999999998887788888888887776654     556666643  11                11       234


Q ss_pred             hHHHHHHHHHhcc--CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHH
Q psy7267         168 KGGAVTLGTKCAR--GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFF  245 (569)
Q Consensus       168 ka~AlN~Gl~~A~--gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~  245 (569)
                      .+.-+|.|+..|+  .|||++-|.|..+-.+.       +.-               ++.-..|.+. ......-....+
T Consensus       122 RAsLINVGf~eas~~~DYiaMhDVDLLPlN~e-------l~Y---------------~fP~~~gp~H-iasP~lHPkYHY  178 (310)
T KOG3917|consen  122 RASLINVGFNEASRLCDYIAMHDVDLLPLNPE-------LPY---------------DFPGIGGPRH-IASPQLHPKYHY  178 (310)
T ss_pred             hhhheecchhhhcchhceeeecccccccCCCC-------CCC---------------CCCccCCccc-ccCcccCchhhh
Confidence            5667888888875  69999999996432111       100               1111122222 111111111111


Q ss_pred             HHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchh---hchHHHHHHHHcCCCEEEE
Q psy7267         246 RNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWA---FDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       246 r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~---~D~EL~~Ra~~~G~rI~~v  312 (569)
                      .+                    ..+|..+.+++-+++. .++....|+   +|-|+..|+..+|..+...
T Consensus       179 ~~--------------------fvGGILll~~~hyk~~-NGMSN~yWGWGlEDDEFy~RI~dagLqltRp  227 (310)
T KOG3917|consen  179 EK--------------------FVGGILLLTLKHYKKL-NGMSNKYWGWGLEDDEFYLRIIDAGLQLTRP  227 (310)
T ss_pred             hh--------------------hcceeEEeeHHHHHHh-cCccccccccCcccchhhheeccccceEecc
Confidence            11                    1246778999999987 344444443   4999999999999876543

>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases

Probab=84.77  E-value=0.85  Score=38.12  Aligned_cols=44  Identities=16%  Similarity=0.118  Sum_probs=29.6

Q ss_pred             cccceeeEeHHHHHHHhccccCCc---h-hhchHHHHHHHHcCCCEEEEE
Q psy7267         268 TQCGFKLFTRKSALQLFSSIHVQR---W-AFDVELLFIAEVLHIPMAEVS  313 (569)
Q Consensus       268 ~~~gf~lfrR~al~~I~~~~~~e~---~-~~D~EL~~Ra~~~G~rI~~vP  313 (569)
                      ..+|..+++|+.++++  +..+|.   | .+|.||..|+..+|.++..++
T Consensus        19 ~~Gg~~~~~~~~f~~v--nGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~   66 (78)
T PF02709_consen   19 FFGGVFAISREDFEKV--NGFDERFWGWGGEDDDLYNRLWKAGLKIVRVP   66 (78)
T ss_dssp             ---SEEEEEHHHHHHT--TSS-SS-TSCSSHHHHHHHHHHHTT---B-SS
T ss_pred             eeEEEEEEeHHHHHHc--CCCCccccccCccHHHHHHHHHHcCCeEEecC
Confidence            4457789999999999  544443   4 369999999999999977654

The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....

>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=84.43  E-value=6.1  Score=43.54  Aligned_cols=96  Identities=14%  Similarity=0.083  Sum_probs=62.4

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|+.+. ..|...|+++.+.    .      --+|+++-....+   ++.+.+ .+.  ..+.++..++..|.+.++..
T Consensus        25 l~pi~g~-pli~~~l~~l~~~----g------i~~iiiv~~~~~~---~i~~~~-~~~--~~i~~~~~~~~~Gt~~al~~   87 (459)
T PRK14355         25 MHPLAGR-PMVSWPVAAAREA----G------AGRIVLVVGHQAE---KVREHF-AGD--GDVSFALQEEQLGTGHAVAC   87 (459)
T ss_pred             eceeCCc-cHHHHHHHHHHhc----C------CCeEEEEECCCHH---HHHHHh-ccC--CceEEEecCCCCCHHHHHHH
Confidence            6666665 5566666655543    1      2266666443222   222222 221  35666655667899999999


Q ss_pred             HHHhcc--CcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         175 GTKCAR--GSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~--gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      |++..+  .|.++++++|. .+.++.+.++++.+..
T Consensus        88 a~~~l~~~~~~vlv~~gD~p~~~~~~i~~l~~~~~~  123 (459)
T PRK14355         88 AAPALDGFSGTVLILCGDVPLLRAETLQGMLAAHRA  123 (459)
T ss_pred             HHHHhhccCCcEEEEECCccCcCHHHHHHHHHHHHh
Confidence            988764  47999999998 5788999999988765

>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []

Probab=84.25  E-value=1.5  Score=46.18  Aligned_cols=107  Identities=20%  Similarity=0.309  Sum_probs=64.0

Q ss_pred             cEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhh-CC-CeEEEEEcCC--CC
Q psy7267          91 NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKC-GE-DIVRGLKLLK--NR  166 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~-~~-~~V~vi~~~~--n~  166 (569)
                      .|.||||+-+..  |...+++-...+.         ++.+|||-|+...+..++.+-+.-+. .. .-.+++-.+.  ..
T Consensus         9 ~~divi~~~~~~--l~~~~~~wr~~~~---------~~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~~~lg~~~~i~~   77 (348)
T PF03214_consen    9 EVDIVIPALRPN--LTDFLEEWRPFFS---------PYHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIERVLGAKTLIPF   77 (348)
T ss_pred             cccEEeeccccc--HHHHHHHHHHhhc---------ceeEEEEeCCCccccccCCcccceeeecHhhHHhhcCCcccccc
Confidence            489999997743  3344444444322         68999999986554443332211000 00 0011111110  12


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      .-...+|.|+-.++.+|++++|.|+.+..|..-..++.+.++
T Consensus        78 ~~~a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh  119 (348)
T PF03214_consen   78 KGDACRNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQH  119 (348)
T ss_pred             cccchhhhHhhhcccceEEEEccccccccCCccceehhhhcc
Confidence            234578999999999999999999998888776666666654

It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction

>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional

Probab=84.04  E-value=18  Score=35.80  Aligned_cols=41  Identities=12%  Similarity=0.149  Sum_probs=31.2

Q ss_pred             CChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         166 RGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       166 ~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      .|.+ .+..+++....|.++++++|. .+.++.+.++++.+.+
T Consensus        75 ~g~~-~~~~a~~~~~~d~~lv~~~D~P~i~~~~i~~l~~~~~~  116 (238)
T PRK13368         75 SGTD-RLAEVMLKIEADIYINVQGDEPMIRPRDIDTLIQPMLD  116 (238)
T ss_pred             CccH-HHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHHH
Confidence            3444 344566666678999999998 5789999999998865

>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase

Probab=83.71  E-value=6.5  Score=39.63  Aligned_cols=101  Identities=14%  Similarity=0.146  Sum_probs=61.3

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|+-+. ..|...|+++.+.   ..      --+|+|+-....+...+.+.+..... ...+.++...+..|-+.|+..
T Consensus        25 llpv~g~-plI~~~l~~l~~~---~g------i~~i~iv~~~~~~~i~~~l~~~~~~~-~~~i~~~~~~~~~Gt~~al~~   93 (257)
T cd06428          25 LFPVAGK-PMIHHHIEACAKV---PD------LKEVLLIGFYPESVFSDFISDAQQEF-NVPIRYLQEYKPLGTAGGLYH   93 (257)
T ss_pred             cCeECCe-eHHHHHHHHHHhc---CC------CcEEEEEecCCHHHHHHHHHhccccc-CceEEEecCCccCCcHHHHHH
Confidence            6777776 6666666666541   00      23677776544443344443321111 124555554556888888888


Q ss_pred             HHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         175 GTKCAR---GSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                      +.....   .+.++++.+|...+. .+..+++...+
T Consensus        94 a~~~l~~~~~~~~lv~~gD~~~~~-dl~~~~~~h~~  128 (257)
T cd06428          94 FRDQILAGNPSAFFVLNADVCCDF-PLQELLEFHKK  128 (257)
T ss_pred             HHHHhhccCCCCEEEEcCCeecCC-CHHHHHHHHHH
Confidence            776642   477889999988654 48888887765

N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase, but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repre

>TIGR03552 F420_cofC 2-phospho-L-lactate guanylyltransferase CofC

Probab=83.31  E-value=8.5  Score=36.96  Aligned_cols=51  Identities=24%  Similarity=0.160  Sum_probs=40.6

Q ss_pred             eEEEEEcCCCCChHHHHHHHHHhcc--CcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         156 IVRGLKLLKNRGKGGAVTLGTKCAR--GSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       156 ~V~vi~~~~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      ++.++.++ ..|.+.++..|++++.  ++.++++-+|.. +.++.++++++.+++
T Consensus        65 ~v~~i~~~-~~G~~~si~~al~~~~~~~~~vlv~~~D~P~l~~~~i~~l~~~~~~  118 (195)
T TIGR03552        65 GAPVLRDP-GPGLNNALNAALAEAREPGGAVLILMADLPLLTPRELKRLLAAATE  118 (195)
T ss_pred             CCEEEecC-CCCHHHHHHHHHHHhhccCCeEEEEeCCCCCCCHHHHHHHHHhccc
Confidence            56677644 4599999999998754  469999999986 689999999988754

Members of this protein family are the CofC enzyme of coenzyme F420 biosynthesis.

>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry

Probab=83.10  E-value=3.7  Score=40.70  Aligned_cols=101  Identities=16%  Similarity=0.100  Sum_probs=65.2

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeC-CCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSD-GSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDD-gStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ++|+.|....|...|+.+.+.    .      --++++|-. ...+.-.+.+++.. ++ ..++.++..+...|.+.|+.
T Consensus        24 ll~i~g~~pli~~~l~~l~~~----g------~~~ii~V~~~~~~~~i~~~~~~~~-~~-~~~i~~i~~~~~~Gta~al~   91 (248)
T PF00483_consen   24 LLPIGGKYPLIDYVLENLANA----G------IKEIIVVVNGYKEEQIEEHLGSGY-KF-GVKIEYIVQPEPLGTAGALL   91 (248)
T ss_dssp             GSEETTEEEHHHHHHHHHHHT----T------CSEEEEEEETTTHHHHHHHHTTSG-GG-TEEEEEEEESSSSCHHHHHH
T ss_pred             cceecCCCcchhhhhhhhccc----C------CceEEEEEeecccccccccccccc-cc-cccceeeecccccchhHHHH
Confidence            567777755566666665552    1      336455444 32222223332211 11 02577887788889999999


Q ss_pred             HHHHhccCcE----EEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         174 LGTKCARGSI----ILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       174 ~Gl~~A~gd~----Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      .+......+-    ++++.+|...+. .+..+++...+.
T Consensus        92 ~a~~~i~~~~~~~~~lv~~gD~i~~~-~~~~~l~~~~~~  129 (248)
T PF00483_consen   92 QALDFIEEEDDDEDFLVLNGDIIFDD-DLQDMLEFHRES  129 (248)
T ss_dssp             HTHHHHTTSEE-SEEEEETTEEEEST-THHHHHHHHHHH
T ss_pred             HHHHHhhhccccceEEEEeccccccc-hhhhHHHhhhcc
Confidence            9999988765    999999998777 778888887765

; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....

>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans

Probab=82.50  E-value=1.2  Score=45.47  Aligned_cols=103  Identities=19%  Similarity=0.188  Sum_probs=59.0

Q ss_pred             EEEEEee-cCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHH
Q psy7267          92 LSVIVPA-YNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGG  170 (569)
Q Consensus        92 VSVIIP~-yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~  170 (569)
                      +||||-+ |+..+.|.+.|+.+.+.        | .--||+||=++.... .+. .+.....  ..|+++..+.|  .-.
T Consensus         1 fTvvi~t~~~R~~~L~~~l~~l~~~--------~-~l~~IvVvWn~~~~~-P~~-~~~~~~~--vpV~~~~~~~n--sLn   65 (247)
T PF09258_consen    1 FTVVINTSYKRSDLLKRLLRHLASS--------P-SLRKIVVVWNNPNPP-PPS-SKWPSTG--VPVRVVRSSRN--SLN   65 (247)
T ss_dssp             EEEEEEE-SS-HHHHHHHHHHHTTS--------T-TEEEEEEEEE-TS---THH-HHHT-----S-EEEEEESSH--HGG
T ss_pred             CEEEEEecccchHHHHHHHHHHHcC--------C-CCCeEEEEeCCCCCC-Ccc-cccCCCC--ceEEEEecCCc--cHH
Confidence            4789999 88776666666555322        1 156899987763222 111 2222222  56788775543  111


Q ss_pred             HHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhcc
Q psy7267         171 AVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELT  209 (569)
Q Consensus       171 AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~  209 (569)
                      .+-.-....+.|.|+.+|.|..++.+.|+...+..++.+
T Consensus        66 nRF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~p  104 (247)
T PF09258_consen   66 NRFLPDPEIETDAVLSLDDDVMLSCDELEFAFQVWREFP  104 (247)
T ss_dssp             GGGS--TT--SSEEEEEETTEEE-HHHHHHHHHHHCCST
T ss_pred             hcCcCccccCcceEEEecCCcccCHHHHHHHHHHHHhCh
Confidence            222233466899999999999999999999999888753

They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.

>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family

Probab=82.25  E-value=8.3  Score=37.68  Aligned_cols=97  Identities=13%  Similarity=0.023  Sum_probs=57.6

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVT  173 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN  173 (569)
                      ++|+-+. ..|...|+++.+.    .      --+|+++-+...+...+.+.+  ..+ .-.+...... +..|-+.|+.
T Consensus        24 llpi~g~-~li~~~l~~l~~~----g------i~~i~iv~~~~~~~i~~~~~~--~~~-~~~i~~~~~~~~~~g~~~~l~   89 (221)
T cd06422          24 LVPVAGK-PLIDHALDRLAAA----G------IRRIVVNTHHLADQIEAHLGD--SRF-GLRITISDEPDELLETGGGIK   89 (221)
T ss_pred             eeeECCE-EHHHHHHHHHHHC----C------CCEEEEEccCCHHHHHHHHhc--ccC-CceEEEecCCCcccccHHHHH
Confidence            5666665 6666666666553    1      226666654433333333322  111 1234444433 3568889999


Q ss_pred             HHHHhccCcEEEEEcCCCCCChhhHHHHHHHHH
Q psy7267         174 LGTKCARGSIILFADADGATKFADLEKLEDKLK  206 (569)
Q Consensus       174 ~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~  206 (569)
                      .|+.....+.++++++|...+.+ +.++++...
T Consensus        90 ~~~~~~~~~~~lv~~~D~i~~~~-~~~~~~~~~  121 (221)
T cd06422          90 KALPLLGDEPFLVVNGDILWDGD-LAPLLLLHA  121 (221)
T ss_pred             HHHHhcCCCCEEEEeCCeeeCCC-HHHHHHHHH
Confidence            99998866889999999988766 445555544

This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.

>TIGR03584 PseF pseudaminic acid CMP-transferase

Probab=82.21  E-value=23  Score=35.22  Aligned_cols=43  Identities=14%  Similarity=-0.015  Sum_probs=35.4

Q ss_pred             CCChHHHHHHHHHhc----cCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         165 NRGKGGAVTLGTKCA----RGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A----~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      ..|...++..|++..    +.|+|+++++|.. ..++.+.++++.+.+
T Consensus        75 ~~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~  122 (222)
T TIGR03584        75 FTGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ  122 (222)
T ss_pred             CCCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh
Confidence            356778888888765    3699999999986 588999999999876

The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.

>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional

Probab=82.11  E-value=12  Score=36.33  Aligned_cols=52  Identities=15%  Similarity=0.086  Sum_probs=42.8

Q ss_pred             eEEEEEcCC-CCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         156 IVRGLKLLK-NRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       156 ~V~vi~~~~-n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      +++++.... ..|-..++..|++..+.|+++++++|.. ++++.++++++..++
T Consensus        67 ~~~~i~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~  120 (200)
T PRK02726         67 GCHWLREPPPSQGPLVAFAQGLPQIKTEWVLLLACDLPRLTVDVLQEWLQQLEN  120 (200)
T ss_pred             CCeEecCCCCCCChHHHHHHHHHhCCCCcEEEEeCCCCCCCHHHHHHHHHHhhc
Confidence            466665443 3688899999999998899999999985 589999999998764

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=82.08  E-value=44  Score=34.92  Aligned_cols=198  Identities=12%  Similarity=0.120  Sum_probs=98.5

Q ss_pred             CCCccEEEEEee-cCCCCChHHHHHHHHHHHHhhhccCCCCceEEEE-EeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          87 EPSVNLSVIVPA-YNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIV-VSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        87 ~~~p~VSVIIP~-yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIV-VDDgStD~T~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ...++.-+.+++ ++..+.+...+... .           .++.|++ .=||..|+=.+.-  +.+    .-|++..  .
T Consensus        38 ~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~-----------~nF~i~LfhYDg~vd~w~~~~--ws~----~aiHv~~--~   97 (294)
T PF05212_consen   38 PKKPKYLLAMTVGIKQKDNVDAIVKKF-S-----------DNFDIMLFHYDGRVDEWDDFE--WSD----RAIHVSA--R   97 (294)
T ss_pred             cCCCceEEEEEecHHHHhhhhHHHhhh-c-----------cCceEEEEEecCCcCchhhcc--ccc----ceEEEEe--c
Confidence            345677788887 66654444444333 1           1566654 5688888753321  111    2244433  2


Q ss_pred             CCChH---HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCce-EEEeeeeecccccch
Q psy7267         165 NRGKG---GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNG-VIVGSRAHLEALANV  240 (569)
Q Consensus       165 n~Gka---~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~d-vV~G~r~~~~~~~~~  240 (569)
                      ++.|-   .-...-=-.+.+|||.+.|-|..++...+.++++.+.... ..+  .++...++.. +--.... .......
T Consensus        98 kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~g-LeI--SQPALd~~~~~~~~~iT~-R~~~~~v  173 (294)
T PF05212_consen   98 KQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEG-LEI--SQPALDPDSSEIHHPITK-RRPDSEV  173 (294)
T ss_pred             cceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhC-Ccc--cCcccCCCCceeeeeEEe-ecCCcee
Confidence            22221   1111111135789999999999999889999998888741 011  1111111111 1111000 0000000


Q ss_pred             hhHHHHHHhhhhhhhHhhhccccccccccc------ceeeEeHHHHHHHh---ccccCCchhhchHHHHHHHHcCCCEEE
Q psy7267         241 QRSFFRNILMKGFHFIVWFTGVRTIRDTQC------GFKLFTRKSALQLF---SSIHVQRWAFDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       241 ~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~------gf~lfrR~al~~I~---~~~~~e~~~~D~EL~~Ra~~~G~rI~~  311 (569)
                          .+.  ..     ...........+.|      ..-+|+|++++-+.   ++-...+|+.|.-+.+-+.....+|.-
T Consensus       174 ----hr~--~~-----~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~~~~~~kiGV  242 (294)
T PF05212_consen  174 ----HRK--TR-----GGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCAGDRHKKIGV  242 (294)
T ss_pred             ----Eec--cC-----CCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHhccccccEEE
Confidence                000  00     00000001111111      12479999998883   222236899999999888666778887


Q ss_pred             EEEEEEEe
Q psy7267         312 VSVNWTEI  319 (569)
Q Consensus       312 vPv~~~~~  319 (569)
                      +...+..+
T Consensus       243 VDs~~VvH  250 (294)
T PF05212_consen  243 VDSQYVVH  250 (294)
T ss_pred             EeeEEEEE
Confidence            76555433

>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=82.02  E-value=8.2  Score=42.21  Aligned_cols=97  Identities=16%  Similarity=0.146  Sum_probs=60.5

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|.-+. ..|..+|+++.+.    .      .-++++|-....+.    ++++..+.  .+++++..+...|-+.++..
T Consensus        23 ll~v~gk-pli~~~l~~l~~~----g------~~~iivvv~~~~~~----i~~~~~~~--~~i~~v~~~~~~G~~~sv~~   85 (450)
T PRK14360         23 LHPLGGK-SLVERVLDSCEEL----K------PDRRLVIVGHQAEE----VEQSLAHL--PGLEFVEQQPQLGTGHAVQQ   85 (450)
T ss_pred             cCEECCh-hHHHHHHHHHHhC----C------CCeEEEEECCCHHH----HHHHhccc--CCeEEEEeCCcCCcHHHHHH
Confidence            4555443 5666666666553    1      22555554432222    23332222  35777765556788888888


Q ss_pred             HHHhcc--CcEEEEEcCCC-CCChhhHHHHHHHHHhc
Q psy7267         175 GTKCAR--GSIILFADADG-ATKFADLEKLEDKLKEL  208 (569)
Q Consensus       175 Gl~~A~--gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~  208 (569)
                      +++...  .+.++++|+|. .+.++.++++++.+.+.
T Consensus        86 ~~~~l~~~~~~vlV~~~D~P~i~~~~l~~ll~~~~~~  122 (450)
T PRK14360         86 LLPVLKGFEGDLLVLNGDVPLLRPETLEALLNTHRSS  122 (450)
T ss_pred             HHHHhhccCCcEEEEeCCccccCHHHHHHHHHHHHhc
Confidence            887653  45678899998 46889999999888763

>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=81.74  E-value=9.3  Score=42.01  Aligned_cols=95  Identities=14%  Similarity=0.145  Sum_probs=58.6

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|.-+ ...|+..++.+.+.    .      --+|+++-....    +.+++....   .+++++..++..|-+.|+..
T Consensus        27 l~~i~g-kpli~~~i~~l~~~----g------i~~i~vv~~~~~----~~i~~~~~~---~~~~~i~~~~~~Gt~~al~~   88 (456)
T PRK09451         27 LHTLAG-KPMVQHVIDAANEL----G------AQHVHLVYGHGG----DLLKQTLAD---EPLNWVLQAEQLGTGHAMQQ   88 (456)
T ss_pred             cceeCC-hhHHHHHHHHHHhc----C------CCcEEEEECCCH----HHHHHhhcc---CCcEEEECCCCCCcHHHHHH
Confidence            456555 33455555555432    1      226666654221    223332221   35666665666788999999


Q ss_pred             HHHhcc-CcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         175 GTKCAR-GSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~-gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      |++... .+.++++++|. .+.++.+.++++...+
T Consensus        89 a~~~l~~~~~vlV~~gD~P~i~~~~i~~l~~~~~~  123 (456)
T PRK09451         89 AAPFFADDEDILMLYGDVPLISVETLQRLRDAKPQ  123 (456)
T ss_pred             HHHhhccCCcEEEEeCCcccCCHHHHHHHHHHhhc
Confidence            988764 57899999998 4678889988876543

>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional

Probab=80.98  E-value=11  Score=41.32  Aligned_cols=93  Identities=14%  Similarity=0.129  Sum_probs=61.5

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|+-+. ..|..+|+++.+.           .-+|+|+-+...    +.++++..    ..+.++..++..|.+.|+..
T Consensus        22 l~~v~gk-pli~~~l~~l~~~-----------~~~i~vv~~~~~----~~i~~~~~----~~~~~~~~~~~~g~~~ai~~   81 (448)
T PRK14357         22 LHKISGK-PMINWVIDTAKKV-----------AQKVGVVLGHEA----ELVKKLLP----EWVKIFLQEEQLGTAHAVMC   81 (448)
T ss_pred             eeEECCe-eHHHHHHHHHHhc-----------CCcEEEEeCCCH----HHHHHhcc----cccEEEecCCCCChHHHHHH
Confidence            6677664 6666666666553           125666644221    33333322    23455554566788999999


Q ss_pred             HHHhcc-CcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         175 GTKCAR-GSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~-gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      +++... .|.++++++|. .+..+.+.++++.+++
T Consensus        82 a~~~l~~~~~vlv~~gD~p~i~~~~i~~l~~~~~~  116 (448)
T PRK14357         82 ARDFIEPGDDLLILYGDVPLISENTLKRLIEEHNR  116 (448)
T ss_pred             HHHhcCcCCeEEEEeCCcccCCHHHHHHHHHHHHh
Confidence            988874 58999999997 5678889999988765

>KOG1476|consensus

Probab=80.49  E-value=20  Score=37.75  Aligned_cols=100  Identities=20%  Similarity=0.255  Sum_probs=63.9

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC--CccHHHHHHHHhHhhCCCeEEEEEcCCCC
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS--TDKTMQVVHQYTEKCGEDIVRGLKLLKNR  166 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS--tD~T~eil~~~~~~~~~~~V~vi~~~~n~  166 (569)
                      .|.|-||-|+|+......+ |..+.+.+...    |  ++.-|||+||+  +..+..++++-.-    +..++. .+.+.
T Consensus        86 ~~~iivVTPTY~R~~q~~~-LtRlanTL~~V----~--nLhWIVVEd~~~~~p~v~~~L~rtgl----~ythl~-~~t~~  153 (330)
T KOG1476|consen   86 LPTIIVVTPTYVRPVQAAE-LTRLANTLRLV----P--NLHWIVVEDGEGTTPEVSGILRRTGL----PYTHLV-HKTPM  153 (330)
T ss_pred             CccEEEEcccccchhHHHH-HHHHHHHHhhc----C--CeeEEEEecCCCCCHHHHHHHHHcCC----ceEEEe-ccCCC
Confidence            6779999999999855443 34444444322    2  78999999995  4456666665321    223333 34443


Q ss_pred             C-h----HHHHHHHHHhcc---------CcEEEEEcCCCCCChhhHHH
Q psy7267         167 G-K----GGAVTLGTKCAR---------GSIILFADADGATKFADLEK  200 (569)
Q Consensus       167 G-k----a~AlN~Gl~~A~---------gd~Vv~lDaD~~~~pd~L~~  200 (569)
                      + +    -..+|.|+++.+         .-+|.|-|.|...+-+..++
T Consensus       154 ~~~~~rg~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~e  201 (330)
T KOG1476|consen  154 GYKARRGWEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEE  201 (330)
T ss_pred             CCccccchhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHH
Confidence            3 2    467899988765         24677888888888665555

>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase

Probab=80.34  E-value=6  Score=43.12  Aligned_cols=95  Identities=18%  Similarity=0.152  Sum_probs=60.7

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|.-+. ..|..+++++.+.    .      ..+++++-....+    .+++...+   .++.++..++..|-+.++..
T Consensus        22 l~~i~gk-pli~~~l~~l~~~----g------~~~iiiv~~~~~~----~i~~~~~~---~~i~~~~~~~~~G~~~ai~~   83 (451)
T TIGR01173        22 LHPLAGK-PMLEHVIDAARAL----G------PQKIHVVYGHGAE----QVRKALAN---RDVNWVLQAEQLGTGHAVLQ   83 (451)
T ss_pred             hceeCCc-cHHHHHHHHHHhC----C------CCeEEEEECCCHH----HHHHHhcC---CCcEEEEcCCCCchHHHHHH
Confidence            5565554 5566666665543    1      2266666443222    22332222   24566655556788889999


Q ss_pred             HHHhcc-CcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         175 GTKCAR-GSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       175 Gl~~A~-gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      +++..+ .|.++++++|. .++++.++++++.+.+
T Consensus        84 a~~~l~~~~~~lv~~~D~p~i~~~~~~~l~~~~~~  118 (451)
T TIGR01173        84 ALPFLPDDGDVLVLYGDVPLISAETLERLLEAHRQ  118 (451)
T ss_pred             HHHhcCCCCcEEEEECCcCCcCHHHHHHHHHHHhh
Confidence            988874 47899999998 5788999999988765

This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.

>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

Probab=80.18  E-value=20  Score=34.88  Aligned_cols=41  Identities=22%  Similarity=0.276  Sum_probs=35.0

Q ss_pred             ChHHHHHHHHHhc-cCcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         167 GKGGAVTLGTKCA-RGSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       167 Gka~AlN~Gl~~A-~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      +...++..|++.. +.|+++++++|.. ++++.+.++++.+.+
T Consensus        76 ~~~~sl~~~l~~~~~~d~vlv~~~D~P~i~~~~i~~li~~~~~  118 (217)
T TIGR00453        76 TRQDSVRNGLKALKDAEWVLVHDAARPFVPKELLDRLLEALRK  118 (217)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEccCccCCCCHHHHHHHHHHHhh
Confidence            4567888899887 6899999999984 799999999998865

Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.

>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]

Probab=80.08  E-value=24  Score=35.65  Aligned_cols=104  Identities=16%  Similarity=0.185  Sum_probs=57.5

Q ss_pred             cEEEEEeecCCCCChHH----------HHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEE
Q psy7267          91 NLSVIVPAYNEQDRLKP----------MLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGL  160 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~~----------~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi  160 (569)
                      ++.||||++=....++.          ++..+.++..+-.      --+|+|.-|.  .+-.+.+++    ++ ..+...
T Consensus         3 ~~~viIPAR~~STRLpgKPLadI~GkpmI~rV~e~a~~s~------~~rvvVATDd--e~I~~av~~----~G-~~avmT   69 (247)
T COG1212           3 KFVVIIPARLASTRLPGKPLADIGGKPMIVRVAERALKSG------ADRVVVATDD--ERIAEAVQA----FG-GEAVMT   69 (247)
T ss_pred             ceEEEEecchhcccCCCCchhhhCCchHHHHHHHHHHHcC------CCeEEEEcCC--HHHHHHHHH----hC-CEEEec
Confidence            46778887544433322          2344444433211      3367776442  122333333    21 233333


Q ss_pred             EcCCCCChHHHHHHHHHhc---cCcEEEEEcCCCC-CChhhHHHHHHHHHhc
Q psy7267         161 KLLKNRGKGGAVTLGTKCA---RGSIILFADADGA-TKFADLEKLEDKLKEL  208 (569)
Q Consensus       161 ~~~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~  208 (569)
                      ....+.|--. +..+++..   ..++|+-+-+|.. ++|..+.++++.+++.
T Consensus        70 ~~~h~SGTdR-~~Ev~~~l~~~~~~iIVNvQGDeP~i~p~~I~~~~~~L~~~  120 (247)
T COG1212          70 SKDHQSGTDR-LAEVVEKLGLPDDEIIVNVQGDEPFIEPEVIRAVAENLENS  120 (247)
T ss_pred             CCCCCCccHH-HHHHHHhcCCCcceEEEEccCCCCCCCHHHHHHHHHHHHhC
Confidence            4344556444 34444443   4589999999975 6899999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	569
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	1e-24
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	3e-20
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	1e-12
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	3e-10
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	9e-12
2bo4_A	397	Mannosylglycerate synthase; catalysis, glycosyltra	4e-11
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	5e-11
3bcv_A	240	Putative glycosyltransferase protein; protein stru	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	6e-08
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	2e-07
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	5e-07
2zu9_A	394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	5e-04

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Length = 329

 Score =  103 bits (259), Expect = 1e-24
 Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 22/227 (9%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           +SV++PA +E+D +  ++D            +     E+IV+  GSTD T         +
Sbjct: 50  ISVVLPALDEEDTIGSVIDSI-------SPLVDGLVDELIVLDSGSTDDTEIRAVAAGAR 102

Query: 152 CGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFA-DLEKLEDKLKELTD 210
                    ++    GKG A+      +RG I++F D+D        +  L   L  LT 
Sbjct: 103 VVSREQALPEVPIRPGKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPL--LTG 160

Query: 211 GDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQC 270
                 K+       V                      L            +  I     
Sbjct: 161 DGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPL-----LAALRPELGCILQPLG 215

Query: 271 GFKLFTRKSALQL-FSSIHVQRWAFDVELLF--IAEVLHIPMAEVSV 314
           G    TR+    + F+      +  ++ LL      +    +A+V++
Sbjct: 216 GEYAATRELLTSVPFAP----GYGVEIGLLVDTFDRLGLDAIAQVNL 258

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Length = 387

 Score = 91.8 bits (227), Expect = 3e-20
 Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 25/246 (10%)

Query: 80  EFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTD 139
           +      E  + +S ++P+ N  D +  ++DE                 +I+VV   S D
Sbjct: 84  DLARRKRELGLTVSAVLPSRNVADTVGGIIDEIHALNER-----APLIDQILVVDADSED 138

Query: 140 KTMQVVHQYTEKCGEDIVRGLKLLK----NRGKGGAVTLGTKCARGSIILFADADGATKF 195
            T  V        G ++    +L+       GKG A+       RG ++L+ DAD     
Sbjct: 139 GTAGVA----ASHGAEVYSENELMSGYGDAHGKGDAMWRALSVTRGDLVLYIDADTRD-- 192

Query: 196 ADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHF 255
              +     L  + +   +     AA       G     +    V     + +      F
Sbjct: 193 FRPQLAYGVLGPVLEVPGV-RFVKAAYRRPFRKGESIEEDGGGRVTELTAKPL------F 245

Query: 256 IVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSVN 315
            +++  +        G  +  R+    +     +  +A +  ++          A   V+
Sbjct: 246 NLFYPELAGFVQPLAGEFVADRELFCSI---PFLTGYAVETGIMIDVLKKVGLGAMAQVD 302

Query: 316 WTEIEG 321
             E + 
Sbjct: 303 LGERQN 308

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625

 Score = 69.6 bits (170), Expect = 1e-12
 Identities = 53/347 (15%), Positives = 97/347 (27%), Gaps = 60/347 (17%)

Query: 56  PFPDIDFLSKGERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIE- 114
           P    D++  G+R  LD    ++L            LS+++P YN       +L  T+  
Sbjct: 67  PESTNDYVWAGKRKELDDYPRKQLIID--------GLSIVIPTYNRAK----ILAITLAC 114

Query: 115 FLNERRKKIPTFK-YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVT 173
             N++     T   YE+IV  DGS +   ++V ++        VR     K+ G      
Sbjct: 115 LCNQK-----TIYDYEVIVADDGSKENIEEIVREFESLLNIKYVR----QKDYGYQLCAV 165

Query: 174 L--GTKCARGSIILFADADGATKFADL---EKLEDKLKEL----------TDGDYIEDKN 218
              G + A+ + +   D D             ++  ++ L                  K+
Sbjct: 166 RNLGLRAAKYNYVAILDCD------MAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKH 219

Query: 219 NAAGCNGVIVGSRAHLEAL------ANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGF 272
                           E +        V+++   +  ++ F          T      G 
Sbjct: 220 TYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGG 279

Query: 273 KLFTRKSALQ---LFSSIHVQRWAFDVELLF-IAE----VLHIPMAEVSVNWTEIEGSKI 324
            +   K  L     F          D E  + +         +          E  G + 
Sbjct: 280 NVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE--GAMAYHQEPPGKEN 337

Query: 325 VPVFSWIQMGWDVLNIWLHYTLGLWKIKAMENKYRAVYVPSQTSPVY 371
               +  +     L           K K      + V + S   P Y
Sbjct: 338 ETDRAAGKNITVQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAY 384

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Length = 625

 Score = 61.9 bits (150), Expect = 3e-10
 Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 34/143 (23%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIE-FLNERRKKIPTFK-YEIIVVSDGSTDKTMQVVHQYT 149
           +S+ +PAYN    +       +E  LN+      T    E+ +  DGSTD T++++ ++ 
Sbjct: 377 VSIYIPAYNCSKYIV----RCVESALNQ------TITDLEVCICDDGSTDDTLRILQEHY 426

Query: 150 EKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADL---EKLEDKLK 206
                  VR     KN+G G A     +  RG  I   D+D      D    + +E  L 
Sbjct: 427 AN--HPRVR-FISQKNKGIGSASNTAVRLCRGFYIGQLDSD------DFLEPDAVELCLD 477

Query: 207 EL----------TDGDYIEDKNN 219
           E           T    I+ + N
Sbjct: 478 EFRKDLSLACVYTTNRNIDREGN 500

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Length = 729

 Score = 66.9 bits (163), Expect = 9e-12
 Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 11/100 (11%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFK-YEIIVVSDGSTDKTMQVVHQYTE 150
           L++IV  YN ++ +   L+   +            + + +I+V+DGSTD++ +++ +  +
Sbjct: 4   LTIIVTYYNAEEYITGCLESIKQ---------QRTQDFNLIIVNDGSTDQSKKLMDEAIK 54

Query: 151 KCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
              +  +R + L +N G   A  +  +       +F DAD
Sbjct: 55  DY-DKNIRFIDLDENSGHAHARNIALEEVETPYFMFLDAD 93

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Length = 397

 Score = 64.0 bits (155), Expect = 4e-11
 Identities = 32/240 (13%), Positives = 60/240 (25%), Gaps = 49/240 (20%)

Query: 93  SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKC 152
            V+ P  +E           +          P  +   ++      D+T + V +   + 
Sbjct: 3   LVVFPFKHEHPE-------VLLHNVRVAAAHP--RVHEVLCIGYERDQTYEAVERAAPEI 53

Query: 153 GEDIVRGLKLLK-------NRGKGGAVTLG----TKCARGSIILFADADGATKFAD-LEK 200
                  + +           GKG  +        +  +   I F DAD  +   D + K
Sbjct: 54  SRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITK 113

Query: 201 LEDKLK---ELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIV 257
            E+       L    +     +A                           I   GF  + 
Sbjct: 114 AEEAADFGYGLVRHYFPRASTDAM----------------------ITWMITRTGFALLW 151

Query: 258 WFTGVRTIRDTQCGFKLFTRK---SALQLFSSIHVQRWAFDVELLFIAEVLHIPMAEVSV 314
             T +  I     G  L  R+      +         W  D    F+     + + E  +
Sbjct: 152 PHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYI 211

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Length = 255

 Score = 62.4 bits (152), Expect = 5e-11
 Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 26/120 (21%)

Query: 93  SVIVPAYNEQDRLKPMLDETIE-FLNERRKKIPTFK-YEIIVVSDGSTDKTMQVVHQYTE 150
           SVI+ +YN+ D +     ++I   L++      TF  +E+ ++ D S ++T+ V+  +  
Sbjct: 4   SVIMTSYNKSDYVA----KSISSILSQ------TFSDFELFIMDDNSNEETLNVIRPFLN 53

Query: 151 KC-----GEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADL---EKLE 202
                    DI    +  +       +    + A G  I +A  D      ++   ++L 
Sbjct: 54  DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDD------NIYMPDRLL 107

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Length = 240

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 45/224 (20%), Positives = 81/224 (36%), Gaps = 43/224 (19%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFK-YEIIVVSDGSTDKTMQVVHQYTE 150
           +SVIVP YN +  L   +   +  L +      T    EII++ D S D   ++   Y  
Sbjct: 7   VSVIVPIYNVEKYLDQCVQ-AL--LAQ------TLSDIEIILIDDESPDNCPKICDDYAA 57

Query: 151 KCGED--IVRGLKLL--KNRGKGGAVTLGTKCARGSIILFADADGATKFAD------LEK 200
           +      I    K++  KN G G A   G   A G  + F D+D      D         
Sbjct: 58  Q---YPNI----KVIHKKNAGLGMACNSGLDVATGEYVAFCDSD------DYVDSDMYMT 104

Query: 201 LEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQ-RSFFRNILMKGFHFIVWF 259
           + +  ++    D +          G+  G+  H +     + ++    +L        + 
Sbjct: 105 MYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYA 163

Query: 260 TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAE 303
              R I+ +     L+ R++   L    H++   F  E +  +E
Sbjct: 164 REERAIQVSAKV-VLY-RRN---LIEKKHLR---FVSERILPSE 199

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.9 bits (131), Expect = 6e-08
 Identities = 55/423 (13%), Positives = 113/423 (26%), Gaps = 96/423 (22%)

Query: 42  GILSYAYR--------SFKTKNPFPDI-DFLSKGERVFLDVKTGQELEFPSLDDEPSVNL 92
           G   Y Y+        +F       D+ D     + +    +    +         ++ L
Sbjct: 12  GEHQYQYKDILSVFEDAFVDNFDCKDVQDMP---KSILSKEEIDHIIMSKD-AVSGTLRL 67

Query: 93  SVIVPAYNE---QDRLKPMLDETIEFLNER---RKKIPTFKYEIIVVSDGSTDKTMQVVH 146
              + +  E   Q  ++ +L    +FL       ++ P+    + +          QV  
Sbjct: 68  FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127

Query: 147 QYT---EKCGEDIVRGLKLLKNR------GKGGA--VTLGTKCARGSIILFADADGA--T 193
           +Y     +    + + L  L+        G  G+    +         +           
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187

Query: 194 KFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR-----NI 248
              +    E  L+ L    Y  D N  +  +      +  + ++    R   +     N 
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH-SSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 249 LMKGFHFI---VWFTGVRTIR--DTQCGFKLFTRKS----ALQLFSSIHV----QRWAFD 295
           L+     +   V     +     +  C   L TR       L   ++ H+          
Sbjct: 247 LL-----VLLNVQ--NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 296 ----VELLFIAEVLHIPMAEVSVNWTEIEGSKIVP-VFSWI----QMGWDVLNIWLHYTL 346
                 LL   + L     ++       E     P   S I    + G    + W H   
Sbjct: 300 PDEVKSLL--LKYLDCRPQDLPR-----EVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 347 GLWKIKAM---------ENKYRAVY-----------VPSQTSPVYFLKVTGSCNMDVHKT 386
              K+  +           +YR ++           +P+    + +  V  S  M V   
Sbjct: 353 --DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

Query: 387 CAK 389
             K
Sbjct: 411 LHK 413

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 1e-04
 Identities = 57/314 (18%), Positives = 97/314 (30%), Gaps = 95/314 (30%)

Query: 25  ILTEFEIHCYIALFL-----VCGILSYAYRSFKTKNPFPD-------IDFLSKGERVFLD 72
               F + C I L       V   LS A  +  + +              L K    +LD
Sbjct: 258 AWNAFNLSCKI-LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK----YLD 312

Query: 73  VKTGQELEFPS--LDDEPSVNLSVIV------PA------YNEQDRLKPMLDETIEFLN- 117
            +  Q+L  P   L   P   LS+I        A      +   D+L  +++ ++  L  
Sbjct: 313 CRP-QDL--PREVLTTNPRR-LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 118 -ERRK------------KIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK 164
            E RK             IPT    +I   D      M VV++  +           L++
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPTILLSLIW-FDVIKSDVMVVVNKLHKYS---------LVE 418

Query: 165 NRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKL-------KELTDGDYIEDK 217
            + K   +++       SI L    +   K  +   L   +       K     D I   
Sbjct: 419 KQPKESTISIP------SIYL----ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 218 NNAAGCNGVI---VGSRAHLEALANVQR-SFFRNILMKGFHFIVWFTGVRTIRDTQCGFK 273
            +           +G   HL+ + + +R + FR + +  F F+      + IR       
Sbjct: 469 LD-----QYFYSHIGH--HLKNIEHPERMTLFRMVFLD-FRFL-----EQKIRHD--STA 513

Query: 274 LFTRKSALQLFSSI 287
                S L     +
Sbjct: 514 WNASGSILNTLQQL 527

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Length = 570

 Score = 54.5 bits (130), Expect = 6e-08
 Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 10/142 (7%)

Query: 67  ERVFLDVKTGQELEFPSLDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTF 126
            R   D++         L+  P+   S+I+P +NE       L  T+  +  R    P  
Sbjct: 91  NRSLPDIRHPNCNSKRYLETLPNT--SIIIPFHNEGWS---SLLRTVHSVLNRSP--PEL 143

Query: 127 KYEIIVVSDGSTDKT-MQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIIL 185
             EI++V D S  +   + +  Y        VR L+  K  G      LG   A G +I 
Sbjct: 144 VAEIVLVDDFSDREHLKKPLEDYMALF--PSVRILRTKKREGLIRTRMLGASVATGDVIT 201

Query: 186 FADADGATKFADLEKLEDKLKE 207
           F D+        L  L D++  
Sbjct: 202 FLDSHCEANVNWLPPLLDRIAR 223

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Length = 472

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 14/173 (8%)

Query: 84  LDDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQ 143
            D+ P+   SV++  +NE       L  T+  +  R         EI++V D S    ++
Sbjct: 25  PDNLPTT--SVVIVFHNEA---WSTLLRTVHSVINRSP--RHMIEEIVLVDDASERDFLK 77

Query: 144 VVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLED 203
              +   K  +  V  +++ +  G   A   G   +RG +I F D       A  E    
Sbjct: 78  RPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLD-------AHCECTAG 130

Query: 204 KLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFI 256
            L+ L      + +        VI        A +++    F   L   ++ +
Sbjct: 131 WLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPV 183

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Length = 501

 Score = 51.3 bits (122), Expect = 5e-07
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 12/105 (11%)

Query: 86  DEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVV 145
           D P+   SV++  +NE    +  L  T+  + ++    P    EII+V D S D     +
Sbjct: 64  DLPAT--SVVITFHNEA---RSALLRTVVSVLKKSP--PHLIKEIILVDDYSNDPEDGAL 116

Query: 146 HQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADAD 190
               EK     VR L+  +  G   +   G   A+  ++ F D+ 
Sbjct: 117 LGKIEK-----VRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSH 156

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Length = 394

 Score = 41.7 bits (97), Expect = 5e-04
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 21/120 (17%)

Query: 91  NLSVIVPAYNEQDRLK-------PMLDETIEFLNERRKKIPTFKYEIIVVSD--GSTDKT 141
            ++VIVP  NE+  L        P     I   N +R+    +K E+ ++      T   
Sbjct: 52  KMAVIVPMKNEKLHLVDGVLKAIPHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSK 111

Query: 142 MQVVHQ--------YTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGS---IILFADAD 190
           + ++HQ        + E    DI+    ++++ GKG  + +G   A+      + F DAD
Sbjct: 112 IIMIHQKDPGLAKAFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDAD 170

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	569
3bcv_A	240	Putative glycosyltransferase protein; protein stru	99.95
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	99.94
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	99.94
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.93
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	99.92
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	99.92
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.91
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.91
2bo4_A	397	Mannosylglycerate synthase; catalysis, glycosyltra	99.89
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.88
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.86
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	99.86
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	99.85
2nxv_A	249	ATP synthase subunits region ORF 6; majastridin, A	99.7
2zu9_A	394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	99.69
2fy7_A	287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	99.6
2wvl_A	391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	99.58
1fo8_A	343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	98.78
2c0n_A	203	A197; thermophil protein, thermophilic virus, STIV	97.93
3lw6_A	287	FI08434P, beta-4-galactosyltransferase 7; protein-	97.57
3tqd_A	256	3-deoxy-manno-octulosonate cytidylyltransferase; c	96.12
3k8d_A	264	3-deoxy-manno-octulosonate cytidylyltransferase; K	95.6
4fce_A	459	Bifunctional protein GLMU; GLMU. csgid, niaid, str	94.36
3oam_A	252	3-deoxy-manno-octulosonate cytidylyltransferase; c	94.06
1qwj_A	229	Cytidine monophospho-N-acetylneuraminic acid synth	93.65
4fcu_A	253	3-deoxy-manno-octulosonate cytidylyltransferase; s	93.65
3st8_A	501	Bifunctional protein GLMU; acetyltransferase, pyro	92.82
2v0h_A	456	Bifunctional protein GLMU; cell WALL, magnesium, c	91.66
1v84_A	253	Galactosylgalactosylxylosylprotein 3-beta- glucuro	91.56
1ezi_A	228	CMP-N-acetylneuraminic acid synthetase; homodimer,	90.91
1h7e_A	245	3-deoxy-manno-octulosonate cytidylyltransferase; n	90.87
3cu0_A	281	Galactosylgalactosylxylosylprotein 3-beta- glucuro	90.48
2d0j_A	246	Galactosylgalactosylxylosylprotein 3-beta- glucuro	89.9
2waw_A	199	MOBA relate protein; unknown function; HET: PGE; 1	89.84
3f1c_A	246	Putative 2-C-methyl-D-erythritol 4-phosphate cytid	89.1
2wee_A	197	MOBA-related protein; unknown function; 1.65A {Myc	88.68
1hm9_A	468	GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr	88.43
2y6p_A	234	3-deoxy-manno-octulosonate cytidylyltransferase; l	87.48
1vgw_A	231	4-diphosphocytidyl-2C-methyl-D-erythritol synthas;	86.62
4ecm_A	269	Glucose-1-phosphate thymidylyltransferase; HET: DA	86.31
2yc3_A	228	2-C-methyl-D-erythritol 4-phosphate cytidylyltran	85.58
1vic_A	262	3-deoxy-manno-octulosonate cytidylyltransferase; s	85.24
2qh5_A	308	PMI, ALGA, mannose-6-phosphate isomerase; structur	84.1
1i52_A	236	4-diphosphocytidyl-2-C-methylerythritol synthase;	84.07
1e5k_A	201	Molybdopterin-guanine dinucleotide biosynthesis pr	83.31
1omz_A	293	Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro	82.13
3ngw_A	208	Molybdopterin-guanine dinucleotide biosynthesis P	81.6
3d5n_A	197	Q97W15_sulso; NESG, SSR125, structural genomics, P	81.03
3rsb_A	196	Adenosylcobinamide-phosphate guanylyltransferase;	80.86
2xwl_A	223	2-C-methyl-D-erythritol 4-phosphate cytidylyltran;	80.84
1yp2_A	451	Glucose-1-phosphate adenylyltransferase small subu	80.42

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=99.95  E-value=8.7e-27  Score=227.86  Aligned_cols=199  Identities=15%  Similarity=0.153  Sum_probs=141.9

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      .|+||||||+||+++.|.++|+|+++|      .|+  ++|||||||||+|+|.++++++.+++  +++++++ .+|.|+
T Consensus         4 ~p~vsViIp~yn~~~~l~~~l~Sl~~q------~~~--~~eiIvvDd~S~d~t~~~~~~~~~~~--~~i~~i~-~~n~G~   72 (240)
T 3bcv_A            4 IPKVSVIVPIYNVEKYLDQCVQALLAQ------TLS--DIEIILIDDESPDNCPKICDDYAAQY--PNIKVIH-KKNAGL   72 (240)
T ss_dssp             CCSEEEEEEESSCTTTHHHHHHHHHTC------SSS--SEEEEEEECCCSSSHHHHHHHHHHHC--SSEEEEE-CCCCCH
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHhC------cCC--CeEEEEEECCCCcCHHHHHHHHHhhC--CCEEEEE-CCCCCh
Confidence            578999999999999999999999887      555  78999999999999999999998887  7899997 679999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHH-
Q psy7267         169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRN-  247 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~-  247 (569)
                      +.|+|.|+++|+||||+++|+|+.++|++|+++++.+++.              +.+++++.......++......... 
T Consensus        73 ~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~~~~~  138 (240)
T 3bcv_A           73 GMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKY--------------TCDAVFTGLKRITMAGIPTGTVTHQK  138 (240)
T ss_dssp             HHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHH--------------TCSEEEC-------------------
T ss_pred             HHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhc--------------CCCEEEEeeEEEccCCcccccccccc
Confidence            9999999999999999999999999999999999999873              3456655443222221100000000 


Q ss_pred             ----Hhh--hhhhhHhhhcccc------cccccccceeeEeHHHHHHHhcc-ccCCc---hhhchHHHHHHHHcCCCEEE
Q psy7267         248 ----ILM--KGFHFIVWFTGVR------TIRDTQCGFKLFTRKSALQLFSS-IHVQR---WAFDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       248 ----~~~--~~~~~l~~~~~~~------~i~d~~~gf~lfrR~al~~I~~~-~~~e~---~~~D~EL~~Ra~~~G~rI~~  311 (569)
                          ...  .....+.......      ......++..++||++++++  + .+++.   ..+|.+++.|+..+|+++.+
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~--g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~  216 (240)
T 3bcv_A          139 EFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKK--HLRFVSERILPSEDLIFNVDVLANSNIVCV  216 (240)
T ss_dssp             -CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHT--TCCCCCTTTCTTHHHHHHHHHHTTCSCEEE
T ss_pred             ccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHHHc--CCccCCCCCccCCCHHHHHHHHHhCCEEEE
Confidence                000  0000000111100      00112245679999999997  4 34333   45799999999999999999


Q ss_pred             EEE
Q psy7267         312 VSV  314 (569)
Q Consensus       312 vPv  314 (569)
                      +|.
T Consensus       217 ~~~  219 (240)
T 3bcv_A          217 LPQ  219 (240)
T ss_dssp             CC-
T ss_pred             ECC
Confidence            874

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A

Probab=99.94  E-value=5.1e-27  Score=243.85  Aligned_cols=215  Identities=18%  Similarity=0.118  Sum_probs=157.2

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEE-cCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLK-LLKNR  166 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~-~~~n~  166 (569)
                      ..|+||||||+|||++.|.++|+++++|      .||. .+|||||||||+|+|.++++++..+.. .+++++. +++|.
T Consensus        46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q------~~~~-~~eiivVDdgS~D~t~~~~~~~~~~~~-~~~~~~~~~~~n~  117 (329)
T 3ckj_A           46 AGRTISVVLPALDEEDTIGSVIDSISPL------VDGL-VDELIVLDSGSTDDTEIRAVAAGARVV-SREQALPEVPIRP  117 (329)
T ss_dssp             TTCCEEEEEEESSCTTTHHHHHHHHGGG------BTTT-BSEEEEEECSCCSSHHHHHHHTTCEEE-EHHHHCTTSCCCC
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHh------hCCC-CcEEEEEeCCCCchHHHHHHHhhhhhc-cceeeeccCCCCC
Confidence            4578999999999999999999999987      4552 589999999999999999998754310 1222332 67899


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccc-cc------
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEA-LA------  238 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~-~~------  238 (569)
                      |++.|+|.|++.|+||||+++|+|+. ++|++|+++++.+.++             +++++|+|.+..... ++      
T Consensus       118 G~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~-------------~~~~~v~g~~~~~~~~~~~~~~~~  184 (329)
T 3ckj_A          118 GKGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTG-------------DGVHLVKSFYRRPLNVGDAGGGAG  184 (329)
T ss_dssp             SHHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSC-------------SSCCEEEEEEECC-----------
T ss_pred             CHHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhC-------------CCccEEEEEecccccCCccccccc
Confidence            99999999999999999999999999 8999999999997764             577899987754321 11      


Q ss_pred             -chhhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHH-cCCC-EEEEEEE
Q psy7267         239 -NVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEV-LHIP-MAEVSVN  315 (569)
Q Consensus       239 -~~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~-~G~r-I~~vPv~  315 (569)
                       .....................  ...+.+..++++++||++++++  + +.++|.+|.|++.++.+ .|++ +.++|+.
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~rr~~l~~i--~-f~~~~~~D~~l~~r~~~~~g~~~i~~v~~~  259 (329)
T 3ckj_A          185 ATGGGRVTELVARPLLAALRPE--LGCILQPLGGEYAATRELLTSV--P-FAPGYGVEIGLLVDTFDRLGLDAIAQVNLG  259 (329)
T ss_dssp             ----CHHHHHTHHHHHHHHCGG--GGGCSCTTCSCEEEEHHHHTTS--C-BCCGGGHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             ccCCCceehhhHHHHHHHhhhh--hccccCCCccceeeeHHHHHhC--C-CCCCCcccHHHHHHHHHhcCCccEeeecce
Confidence             000001111001111111011  1235567788999999999998  4 35788899999999986 6775 9999999


Q ss_pred             EEEecCCccchhH
Q psy7267         316 WTEIEGSKIVPVF  328 (569)
Q Consensus       316 ~~~~~GS~~~~~~  328 (569)
                      |+.+.+|......
T Consensus       260 ~r~h~~s~~~~~~  272 (329)
T 3ckj_A          260 VREHRNRPLAELG  272 (329)
T ss_dssp             ECEECCCCGGGHH
T ss_pred             EEecCCCcHHHHH
Confidence            9888876654433

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*

Probab=99.94  E-value=5e-27  Score=250.08  Aligned_cols=210  Identities=15%  Similarity=0.119  Sum_probs=156.0

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      .|+||||||+|||++.|+++|+++.+++.    +||. ++|||||||||+|+|.++++++.++.....++++.+++|.|+
T Consensus        93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~----~~~~-~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~  167 (387)
T 3f1y_A           93 GLTVSAVLPSRNVADTVGGIIDEIHALNE----RAPL-IDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGK  167 (387)
T ss_dssp             TCCEEEEEEESSCTTTHHHHHHHHHHHHH----HSCC-CSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSH
T ss_pred             CCeEEEEEEcCCCHHHHHHHHHHHHHHHh----cCCC-CeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCH
Confidence            47799999999999999999999988554    3432 689999999999999999998754321012223445679999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeeccccc-c----hhh
Q psy7267         169 GGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALA-N----VQR  242 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~-~----~~~  242 (569)
                      +.|+|.|++.|+||||+++|+|+. ++|++|+++++.+.+.             +++++|.|.+......+ .    ...
T Consensus       168 g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~-------------p~~d~v~G~~~~~~~~~~~~~~~~~g  234 (387)
T 3f1y_A          168 GDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEV-------------PGVRFVKAAYRRPFRKGESIEEDGGG  234 (387)
T ss_dssp             HHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHS-------------TTCCEEEEEEECC-------CCBCCS
T ss_pred             HHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHC-------------CCceEEEEeeccccccccccccccCC
Confidence            999999999999999999999999 8999999999999874             47799999875432111 0    000


Q ss_pred             HHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHH-HcCCC-EEEEEEEEEEec
Q psy7267         243 SFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAE-VLHIP-MAEVSVNWTEIE  320 (569)
Q Consensus       243 ~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~-~~G~r-I~~vPv~~~~~~  320 (569)
                      ...+.+.......+...  ..++.++.+|+++|+|++++++  .+ .++|.+|+||+.++. +.|++ |.++|+.++++.
T Consensus       235 ~v~~~~~~~l~~~~~~~--l~~~~d~~sG~~a~rR~~l~~i--~f-~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~  309 (387)
T 3f1y_A          235 RVTELTAKPLFNLFYPE--LAGFVQPLAGEFVADRELFCSI--PF-LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNR  309 (387)
T ss_dssp             HHHHHTHHHHHHHHCGG--GTTCSCTTCSCEEEEHHHHTTS--CE-ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCC
T ss_pred             chhhhhHHHHHHHHhHh--hccccccccccEEEEHHHHHhC--CC-CCCcchHHHHHHHHHHhcCCCeEEEEecceeecC
Confidence            11111111111111111  1257888999999999999998  33 478999999999984 56997 999999997765


Q ss_pred             C
Q psy7267         321 G  321 (569)
Q Consensus       321 G  321 (569)
                      .
T Consensus       310 ~  310 (387)
T 3f1y_A          310 H  310 (387)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=99.93  E-value=3.4e-25  Score=240.17  Aligned_cols=210  Identities=16%  Similarity=0.072  Sum_probs=153.1

Q ss_pred             CCCccEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCcc-HHHHHHHHhHhhCCC-eEEEEEcC
Q psy7267          87 EPSVNLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDK-TMQVVHQYTEKCGED-IVRGLKLL  163 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~-T~eil~~~~~~~~~~-~V~vi~~~  163 (569)
                      ..+|+||||||+|||+ +.|.++|+|++++      .||...+|||||||||+|+ |.++++++.+++  + ++++++++
T Consensus        26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q------~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~--~~~v~vi~~~   97 (472)
T 1xhb_A           26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINR------SPRHMIEEIVLVDDASERDFLKRPLESYVKKL--KVPVHVIRME   97 (472)
T ss_dssp             SCCCCEEEEEEESSCCHHHHHHHHHHHHHS------SCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS--SSCEEEEECS
T ss_pred             cCCCCeEEEEEeCCCCHHHHHHHHHHHHhc------CcHhHceEEEEEECCCCcHHHHHHHHHHHHHC--CCcEEEEECC
Confidence            4578899999999999 9999999999987      5554458999999999995 999999998877  5 89999999


Q ss_pred             CCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhh-
Q psy7267         164 KNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQR-  242 (569)
Q Consensus       164 ~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~-  242 (569)
                      +|.|++.|+|.|+++|+||||+++|+|+.++|++|+++++.+++.+              ..++++.....+.+..... 
T Consensus        98 ~n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~--------------~~~v~~~~~~~~~~~~~~~~  163 (472)
T 1xhb_A           98 QRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDR--------------RTVVCPIIDVISDDTFEYMA  163 (472)
T ss_dssp             SCCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCT--------------TEEEEEEEEEECSSSCCEEC
T ss_pred             CCCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCC--------------CEEEEeeeeeEcCCCceecc
Confidence            9999999999999999999999999999999999999999998752              2334443322222111000 


Q ss_pred             --HHHHHHhhhh----h------hhHhhh---cccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHH
Q psy7267         243 --SFFRNILMKG----F------HFIVWF---TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAE  303 (569)
Q Consensus       243 --~~~r~~~~~~----~------~~l~~~---~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~  303 (569)
                        ........+.    .      ....+.   ..........+++.+++|++++++  +.+++.+    .+|+||++|+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--Ggfde~~~~~g~ED~dl~~R~~  241 (472)
T 1xhb_A          164 GSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI--GTYDAGMDIWGGENLEISFRIW  241 (472)
T ss_dssp             CCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHT--TSCCTTSCTTCCCCSHHHHHHH
T ss_pred             CCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHc--CCCCCcccccCchhHHHHHHHH
Confidence              0000000000    0      000000   001122234567789999999999  5555544    46999999999


Q ss_pred             HcCCCEEEEEEEEEEec
Q psy7267         304 VLHIPMAEVSVNWTEIE  320 (569)
Q Consensus       304 ~~G~rI~~vPv~~~~~~  320 (569)
                      +.|+++.++|.....|.
T Consensus       242 ~~G~~i~~~p~~~v~H~  258 (472)
T 1xhb_A          242 QCGGTLEIVTCSHVGHV  258 (472)
T ss_dssp             HTTCEEEEEEEEEEEEE
T ss_pred             hcCCeEEEccCcEEEEE
Confidence            99999999997655444

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=99.92  E-value=1.1e-24  Score=251.84  Aligned_cols=233  Identities=12%  Similarity=0.037  Sum_probs=159.7

Q ss_pred             CCCCccEEEEEeecCCCCCh-HHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHH---------------HHHHHHh
Q psy7267          86 DEPSVNLSVIVPAYNEQDRL-KPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTM---------------QVVHQYT  149 (569)
Q Consensus        86 ~~~~p~VSVIIP~yNE~~~I-~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~---------------eil~~~~  149 (569)
                      +...|+|||+||+|||++.+ +++|+|+.+|      +||.+++||+||||||+|+|.               +.++++.
T Consensus       136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q------~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~  209 (802)
T 4hg6_A          136 PEELPTVDILVPSYNEPADMLSVTLAAAKNM------IYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLC  209 (802)
T ss_dssp             TTTCCCEEEEEECTTCCHHHHHHHHHHHHTS------SCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEEEECCCCHHHHHHHHHHHHhc------cCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHH
Confidence            45578999999999999766 8899999887      899878999999999999993               3344554


Q ss_pred             HhhCCCeEEEEEcCCC-CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEE
Q psy7267         150 EKCGEDIVRGLKLLKN-RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIV  228 (569)
Q Consensus       150 ~~~~~~~V~vi~~~~n-~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~  228 (569)
                      ++.   +++++..++| .||+.|+|.|++.+++|||+++|+|+.++|++++++++.++++             ++.++|+
T Consensus       210 ~~~---~v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~d-------------p~v~~V~  273 (802)
T 4hg6_A          210 REL---GVVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVED-------------PDLFLVQ  273 (802)
T ss_dssp             HHH---TCEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHS-------------SSCCEEE
T ss_pred             Hhc---CcEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcC-------------CCeEEEe
Confidence            443   5777776766 7899999999999999999999999999999999999999764             4667777


Q ss_pred             eeeeecccccchhhH-HHHHHh---hhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHH
Q psy7267         229 GSRAHLEALANVQRS-FFRNIL---MKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEV  304 (569)
Q Consensus       229 G~r~~~~~~~~~~~~-~~r~~~---~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~  304 (569)
                      |.....+.+...... ......   ....................+++.++||++++++ ++...+.+.+|.|++.|+.+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v-Ggf~~~~~~ED~~l~~rl~~  352 (802)
T 4hg6_A          274 TPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA-GGFAGETITEDAETALEIHS  352 (802)
T ss_dssp             CCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH-TTCCCSSSSHHHHHHHHHHT
T ss_pred             ccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc-CCcCCCCcchHHHHHHHHHH
Confidence            755443332111000 000000   0000000000000011123456689999999998 33444567799999999999


Q ss_pred             cCCCEEEEEEEEEEe--cCCccchhHHHHHHHHHHHHHHHHhcchhhHHH
Q psy7267         305 LHIPMAEVSVNWTEI--EGSKIVPVFSWIQMGWDVLNIWLHYTLGLWKIK  352 (569)
Q Consensus       305 ~G~rI~~vPv~~~~~--~GS~~~~~~~~~~~~~~~l~~r~ry~~g~w~i~  352 (569)
                      .|+++.++|.....+  +.+.           ...++++.||..|.++..
T Consensus       353 ~G~ri~~~~~~~~~~~~p~t~-----------~~~~~Qr~RW~~G~~q~l  391 (802)
T 4hg6_A          353 RGWKSLYIDRAMIAGLQPETF-----------ASFIQQRGRWATGMMQML  391 (802)
T ss_dssp             TTCCEEECCCCCEEECCCCSH-----------HHHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEecCCEEEecCCCCH-----------HHHHHHHHHHHccHHHHH
Confidence            999999997443333  2233           345555666666655443

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=99.92  E-value=2.7e-25  Score=219.46  Aligned_cols=191  Identities=14%  Similarity=0.161  Sum_probs=143.1

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC------
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL------  163 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~------  163 (569)
                      |+||||||+||+++.|.++|+|+++|      +||  ++|||||||||+|+|.++++++.+ .  +++++++.+      
T Consensus         1 p~vSViIp~yn~~~~l~~~l~Sl~~q------~~~--~~eiivvDd~S~d~t~~~~~~~~~-~--~~i~~i~~~~~~~~~   69 (255)
T 1qg8_A            1 PKVSVIMTSYNKSDYVAKSISSILSQ------TFS--DFELFIMDDNSNEETLNVIRPFLN-D--NRVRFYQSDISGVKE   69 (255)
T ss_dssp             CCEEEEEEESSCTTTHHHHHHHHHTC------SCC--CEEEEEEECSCCHHHHHHHGGGGG-S--TTEEEEECCCCSHHH
T ss_pred             CeEEEEEEcCCCHHHHHHHHHHHHhc------cCC--ceEEEEEECCCCchHHHHHHHHhh-c--CCEEEEecccccccc
Confidence            56999999999999999999999987      565  799999999999999999999866 3  789999988      


Q ss_pred             --CCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeec--ccccc
Q psy7267         164 --KNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHL--EALAN  239 (569)
Q Consensus       164 --~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~--~~~~~  239 (569)
                        +|.|++.|+|.|+++|+||||+++|+|+.++|++|+++++.++++             ++++++.+.....  +..+.
T Consensus        70 ~~~n~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~  136 (255)
T 1qg8_A           70 RTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTH-------------PEKAVIYSASKTYHLNENRD  136 (255)
T ss_dssp             HHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHC-------------TTCCEEEEEEEEEEEC---C
T ss_pred             cccccCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhC-------------CCceEEEeceEEEEeCCCCc
Confidence              899999999999999999999999999999999999999999985             4667777765433  22111


Q ss_pred             hhhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccc---c--CC--chhhchHHHHHHHHcCCCEEEE
Q psy7267         240 VQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSI---H--VQ--RWAFDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       240 ~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~---~--~e--~~~~D~EL~~Ra~~~G~rI~~v  312 (569)
                      .....    .... .   .... .......++..++||++++++-.+.   .  ++  ...+|.+++.|+.+.| ++..+
T Consensus       137 ~~~~~----~~~~-~---~~~~-~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~  206 (255)
T 1qg8_A          137 IVKET----VRPA-A---QVTW-NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPL  206 (255)
T ss_dssp             EEEEE----EECC-C---SCBS-CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEE
T ss_pred             chhhc----cCch-H---HHHH-hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEe
Confidence            00000    0000 0   0000 1112233456799999999981011   1  22  2456999999999987 68888


Q ss_pred             EE
Q psy7267         313 SV  314 (569)
Q Consensus       313 Pv  314 (569)
                      |.
T Consensus       207 ~~  208 (255)
T 1qg8_A          207 DE  208 (255)
T ss_dssp             EE
T ss_pred             cC
Confidence            74

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=99.91  E-value=2e-24  Score=240.61  Aligned_cols=209  Identities=19%  Similarity=0.135  Sum_probs=152.6

Q ss_pred             CCCccEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH-HHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          87 EPSVNLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT-MQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T-~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ...|+||||||+|||+ +.|.++|+|++++      .||...+|||||||||+|+| .++++++.+++  ++|+++++++
T Consensus       109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~q------t~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~--~~v~vi~~~~  180 (570)
T 2d7i_A          109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNR------SPPELVAEIVLVDDFSDREHLKKPLEDYMALF--PSVRILRTKK  180 (570)
T ss_dssp             SSCCCEEEEEEESSCCHHHHHHHHHHHHHH------SCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS--TTEEEEECSS
T ss_pred             CCCCCeEEEEEECCCCHHHHHHHHHHHHhc------CCccCcEEEEEEECCCCcHHHHHHHHHHHHhC--CeEEEEECCC
Confidence            3468899999999999 9999999999998      55544569999999999999 99999998877  7899999999


Q ss_pred             CCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHH
Q psy7267         165 NRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSF  244 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~  244 (569)
                      |.|++.|+|.|+++|+||||+++|+|+.++|++|+.+++.+.+.+              ..++.+.....+.........
T Consensus       181 n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~--------------~~vv~~~i~~~~~~~~~~~~~  246 (570)
T 2d7i_A          181 REGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNR--------------KTIVCPMIDVIDHDDFRYETQ  246 (570)
T ss_dssp             CCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCT--------------TEEEEEEEEEECTTTCCEECC
T ss_pred             CCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCC--------------CEEEeeeeeccCCCchhhccc
Confidence            999999999999999999999999999999999999999998842              123332221111111100000


Q ss_pred             ----HHHHhhhh--hhhH--------hhhcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcC
Q psy7267         245 ----FRNILMKG--FHFI--------VWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLH  306 (569)
Q Consensus       245 ----~r~~~~~~--~~~l--------~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G  306 (569)
                          .+....+.  ...+        .............+++.+++|++++++  +.+++.+    .+|+||++|+.+.|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--GgfDe~~~~~g~ED~dl~~Rl~~~G  324 (570)
T 2d7i_A          247 AGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWEL--GGYDPGLEIWGGEQYEISFKVWMCG  324 (570)
T ss_dssp             TTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHT--TSSCTTCCSSSSHHHHHHHHHHHTT
T ss_pred             cCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhc--CCCCCcccccCcchHHHHHHHHhCC
Confidence                00000000  0000        000001122334577889999999999  5555554    57999999999999


Q ss_pred             CCEEEEEEEEEEe
Q psy7267         307 IPMAEVSVNWTEI  319 (569)
Q Consensus       307 ~rI~~vPv~~~~~  319 (569)
                      +++.++|.....+
T Consensus       325 ~~i~~~p~~~v~H  337 (570)
T 2d7i_A          325 GRMEDIPCSRVGH  337 (570)
T ss_dssp             CEEEEEEEEEEEE
T ss_pred             CeEEEccCeEEEE
Confidence            9999999765544

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=99.91  E-value=5.1e-24  Score=233.07  Aligned_cols=204  Identities=16%  Similarity=0.057  Sum_probs=146.6

Q ss_pred             CCCccEEEEEeecCCCC-ChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC
Q psy7267          87 EPSVNLSVIVPAYNEQD-RLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN  165 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~-~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n  165 (569)
                      ..+|+||||||+|||++ .|.++|+|++++      .||...+|||||||||+|+|.+.+   .+++  ++++++++++|
T Consensus        63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q------~~~~~~~EIIvVDDgS~D~t~~~~---~~~~--~~v~vi~~~~n  131 (501)
T 2ffu_A           63 VDLPATSVVITFHNEARSALLRTVVSVLKK------SPPHLIKEIILVDDYSNDPEDGAL---LGKI--EKVRVLRNDRR  131 (501)
T ss_dssp             SSCCCEEEEEEESSCCHHHHHHHHHHHHHH------SCGGGEEEEEEEECSCSCTHHHHG---GGGB--TTEEEEECSSC
T ss_pred             cCCCCEEEEEEeCcCcHHHHHHHHHHHHhh------CchhhceeEEEEECCCCchHHHHH---HhcC--CCEEEEECCCC
Confidence            45788999999999997 899999999998      555445799999999999996432   3445  68999999999


Q ss_pred             CChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchh----
Q psy7267         166 RGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQ----  241 (569)
Q Consensus       166 ~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~----  241 (569)
                      .|++.|+|.|+++|+||||+++|+|+.++|++|+++++.+++.              ..++|.+.....+.+....    
T Consensus       132 ~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~--------------~~~vv~~~~~~~~~~~~~~~~~~  197 (501)
T 2ffu_A          132 EGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAED--------------RTRVVSPIIDVINMDNFQYVGAS  197 (501)
T ss_dssp             CHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHC--------------TTEEEEEEEEEECTTTCCEECBC
T ss_pred             cCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhC--------------CCeEEEeeeccCcCCCceeecCC
Confidence            9999999999999999999999999999999999999999884              2245554432222211100    


Q ss_pred             ----hHHHHHHhh----h-hhhhHhh---hcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHc
Q psy7267         242 ----RSFFRNILM----K-GFHFIVW---FTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVL  305 (569)
Q Consensus       242 ----~~~~r~~~~----~-~~~~l~~---~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~  305 (569)
                          ..+......    . ......+   ...........+++.+++|++++++  +.+++.+    .+|+||++|+.+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i--Ggfde~~~~~g~ED~dl~~Rl~~~  275 (501)
T 2ffu_A          198 ADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEEL--GKYDMMMDVWGGENLEISFRVWQC  275 (501)
T ss_dssp             SSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHT--TCCCTTCCSSSSHHHHHHHHHHHT
T ss_pred             cccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHh--CCCCccccccCcchHHHHHHHHhc
Confidence                000000000    0 0000000   0011122345567899999999999  5555544    6799999999999


Q ss_pred             CCCEEEEEEEEE
Q psy7267         306 HIPMAEVSVNWT  317 (569)
Q Consensus       306 G~rI~~vPv~~~  317 (569)
                      |+++.++|....
T Consensus       276 G~~i~~~p~~~v  287 (501)
T 2ffu_A          276 GGSLEIIPCSRV  287 (501)
T ss_dssp             TCEEEEEEEEEE
T ss_pred             CCeEEEccCcEE
Confidence            999999995443

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*

Probab=99.89  E-value=2.1e-22  Score=214.81  Aligned_cols=196  Identities=16%  Similarity=0.126  Sum_probs=139.4

Q ss_pred             EEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhC-C--CeEEEEEcC--C--C
Q psy7267          93 SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG-E--DIVRGLKLL--K--N  165 (569)
Q Consensus        93 SVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~-~--~~V~vi~~~--~--n  165 (569)
                      |||||.+||+ .|+.+++++.....     +|  .+|||||||||+|+|.++++++.++.+ .  .++.++...  .  |
T Consensus         2 slVIiP~~eE-~I~~vl~~l~~~~~-----~~--~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n   73 (397)
T 2bo4_A            2 SLVVFPFKHE-HPEVLLHNVRVAAA-----HP--RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLR   73 (397)
T ss_dssp             CEEEEECCSS-CHHHHHHHHHHHHH-----ST--TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSS
T ss_pred             cEEEEeCCcc-CHHHHHHHHHHhcc-----CC--CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCC
Confidence            4555555654 68888888764321     22  579999999999999999997765542 1  233333222  3  8


Q ss_pred             CChHHHHHHHH----HhccCcEEEEEcCCCC-CChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccch
Q psy7267         166 RGKGGAVTLGT----KCARGSIILFADADGA-TKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANV  240 (569)
Q Consensus       166 ~Gka~AlN~Gl----~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~  240 (569)
                      .||+.|++.|+    +.++||+|+++|||.+ ++|+++.+|++.+++               ++|+|+|.+.....++..
T Consensus        74 ~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~---------------g~D~V~g~~~r~~~~~~~  138 (397)
T 2bo4_A           74 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF---------------GYGLVRHYFPRASTDAMI  138 (397)
T ss_dssp             SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT---------------TCSEEEEECCCCTTSCHH
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc---------------CCCEEEEEeccccCCcHH
Confidence            99999999999    8899999999999996 899999999998854               579999975432223322


Q ss_pred             hhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccc---cCCchhhchHHHHHHHHcCCCEEEEEEE
Q psy7267         241 QRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSI---HVQRWAFDVELLFIAEVLHIPMAEVSVN  315 (569)
Q Consensus       241 ~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~---~~e~~~~D~EL~~Ra~~~G~rI~~vPv~  315 (569)
                      .+...+.++...+    .......+.++.+|+++|+|++++++....   ...+|.+|+++..++.+.|++|.++|+.
T Consensus       139 ~~~~~~~ll~~~~----~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig  212 (397)
T 2bo4_A          139 TWMITRTGFALLW----PHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP  212 (397)
T ss_dssp             HHHTHHHHHHHHC----TTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred             HHHHHHHHHHHHH----HHhhccccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence            2222222211111    111122667888999999999999983211   4568889999999999999999999863

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=99.88  E-value=2.2e-22  Score=225.29  Aligned_cols=193  Identities=18%  Similarity=0.203  Sum_probs=146.6

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      .+|.||||||+||+++.|.++|+|+++|      .|+  ++|||||||||+|+|.++++++.+++  ++++++. .+|.|
T Consensus       373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q------~~~--~~eiivvdd~S~d~t~~~~~~~~~~~--~~i~~~~-~~n~G  441 (625)
T 2z86_A          373 RVPLVSIYIPAYNCSKYIVRCVESALNQ------TIT--DLEVCICDDGSTDDTLRILQEHYANH--PRVRFIS-QKNKG  441 (625)
T ss_dssp             SSCSEEEEEEESSCTTTHHHHHHHHHSS------SCC--SEEEEEEEESCSSSHHHHHHHHHTTC--TTEEEEE-ECCCC
T ss_pred             cCCeEEEEEeCCCCHHHHHHHHHHHHhC------cCC--CeEEEEEECcCChhHHHHHHHHHhhC--CcEEEEe-CCCCC
Confidence            4578999999999999999999999987      555  78999999999999999999987776  6899987 78999


Q ss_pred             hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHH
Q psy7267         168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRN  247 (569)
Q Consensus       168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~  247 (569)
                      ++.|+|.|++.|+||||+++|+|+.++|++|+++++.++++             ++.+++.+.....+..+........ 
T Consensus       442 ~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~~-  507 (625)
T 2z86_A          442 IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKD-------------LSLACVYTTNRNIDREGNLISNGYN-  507 (625)
T ss_dssp             HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHC-------------TTCSEEEEEEEEECTTSCEEEECCC-
T ss_pred             HHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhC-------------CCeeEEEeeeEEECCCCCEeccCcc-
Confidence            99999999999999999999999999999999999999875             4556676654433322111000000 


Q ss_pred             HhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCch--hhchHHHHHHHHcCCCEEEEEEE
Q psy7267         248 ILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW--AFDVELLFIAEVLHIPMAEVSVN  315 (569)
Q Consensus       248 ~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~--~~D~EL~~Ra~~~G~rI~~vPv~  315 (569)
                      .  ....  ......   ....+++.+++|++++++  +.+++.+  .+|.||+.|+.+.| ++.++|..
T Consensus       508 ~--~~~~--~~~~~~---~~~~~~~~~~~r~~~~~~--ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~  567 (625)
T 2z86_A          508 W--PIYS--REKLTS---AMICHHFRMFTARAWNLT--EGFNESISNAVDYDMYLKLSEVG-PFKHINKI  567 (625)
T ss_dssp             C--SSCC--HHHHTT---SCCCCSCEEEEHHHHTTT--TCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEE
T ss_pred             c--ccCC--HHHHhh---cccCCceEEEEHHHHHHh--CCCCCccCChHHHHHHHHHHHhC-CEEEeCCc
Confidence            0  0000  000001   112345679999999998  5555543  57999999999999 89988843

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=99.86  E-value=1.2e-21  Score=219.29  Aligned_cols=201  Identities=17%  Similarity=0.153  Sum_probs=144.3

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCC-C
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKN-R  166 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n-~  166 (569)
                      .+|+||||||+||+++.|.++|+++.+|      +++. ++|||||||||+|+|.++++++.+.   .+++++..+.+ .
T Consensus        91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q------~~~~-~~eiivvDd~s~d~t~~~~~~~~~~---~~i~~i~~~~~~~  160 (625)
T 2z86_A           91 IIDGLSIVIPTYNRAKILAITLACLCNQ------KTIY-DYEVIVADDGSKENIEEIVREFESL---LNIKYVRQKDYGY  160 (625)
T ss_dssp             CCCCEEEEEEESSCHHHHHHHHHHHHTC------CCSS-CEEEEEEEESCSSCHHHHHHTTTTT---SCEEEEEECCCSC
T ss_pred             cCCcEEEEEecCCcHHHHHHHHHHHHhh------ccCC-CeEEEEEeCCCchhHHHHHHHhhhc---CCeEEEEeCCCCc
Confidence            3578999999999999999999988876      4443 7999999999999999999988544   57888886643 4


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHH
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFR  246 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r  246 (569)
                      |++.|+|.|++.|+||||+++|+|+.++|++|+.+++.++++              ....++|.+...............
T Consensus       161 g~~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~  226 (625)
T 2z86_A          161 QLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVD--------------DNVALIGPRKYIDTSKHTYLDFLS  226 (625)
T ss_dssp             CHHHHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHC--------------TTEEEECCEEEECCTTCCHHHHHH
T ss_pred             chhHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcC--------------CceEEEEeeeeccCcccchhhccc
Confidence            699999999999999999999999999999999999999874              224555555433222210000000


Q ss_pred             --HHhh----------------------hhhhhHh---hh-cccccccccccceeeEeHHHHHHHhccccCCch----hh
Q psy7267         247 --NILM----------------------KGFHFIV---WF-TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AF  294 (569)
Q Consensus       247 --~~~~----------------------~~~~~l~---~~-~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~  294 (569)
                        ....                      +......   .. ..........+++.++||++++++  +.+++.+    .+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i--Ggfde~~~~~g~E  304 (625)
T 2z86_A          227 QKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA--GWFDEEFTHWGGE  304 (625)
T ss_dssp             STTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH--CCCCTTCSSCCCH
T ss_pred             chHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh--CCCccccccCCcc
Confidence              0000                      0000000   00 011122235567789999999999  5555554    47


Q ss_pred             chHHHHHHHHcCCCEEEEEE
Q psy7267         295 DVELLFIAEVLHIPMAEVSV  314 (569)
Q Consensus       295 D~EL~~Ra~~~G~rI~~vPv  314 (569)
                      |.|++.|+.++|+++.++|.
T Consensus       305 D~dl~~Rl~~~G~~i~~~p~  324 (625)
T 2z86_A          305 DNEFGYRLYREGCYFRSVEG  324 (625)
T ss_dssp             HHHHHHHHHHTTCEEEECGG
T ss_pred             hhhhhhhHHhCCceEEEccc
Confidence            99999999999999999983

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=99.86  E-value=7.4e-21  Score=215.13  Aligned_cols=225  Identities=12%  Similarity=-0.014  Sum_probs=141.6

Q ss_pred             CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH--HHHHHHHhHhhCCCeEEEEEcCC
Q psy7267          87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT--MQVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T--~eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      +..|+||||||+||+++.|.+||+|+.+|.....     ..+|||||||||+|++  .+..+.+....  ++++++.++ 
T Consensus       177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~-----~~~EIIVVDNgStD~s~~~~~~e~~~~~~--~~I~vI~~~-  248 (657)
T 4fix_A          177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQ-----VIGAVIVPDQGERKVRDHPDFPAAAARLG--SRLSIHDQP-  248 (657)
T ss_dssp             CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHT-----TEEEEEEEECSSSCGGGSTTHHHHHHHHG--GGEEEEECC-
T ss_pred             CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccC-----CCCEEEEEECcCCCccchHHHHHHHHhcC--CCEEEEECC-
Confidence            3468899999999999999999999988743211     1569999999999842  33333333333  689999977 


Q ss_pred             CCChHHHHHHHHHhc----cCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEE--eeeeecccc-
Q psy7267         165 NRGKGGAVTLGTKCA----RGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIV--GSRAHLEAL-  237 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A----~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~--G~r~~~~~~-  237 (569)
                      |.|.++|+|.|++.|    ++|||+++|+|+.++|++|+++++.++.+++.+++|......++.+...  |........ 
T Consensus       249 N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~  328 (657)
T 4fix_A          249 NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFM  328 (657)
T ss_dssp             CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTE
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccc
Confidence            999999999999998    4589999999999999999999999998643333332110000000000  000000000 


Q ss_pred             --cchhhHHHHHHhhhhhh----hHhhhcccccccccccceeeEeHHHHHHHhccccCCch--hhchHHHHHHHHcCCCE
Q psy7267         238 --ANVQRSFFRNILMKGFH----FIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW--AFDVELLFIAEVLHIPM  309 (569)
Q Consensus       238 --~~~~~~~~r~~~~~~~~----~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~--~~D~EL~~Ra~~~G~rI  309 (569)
                        ..........+......    ...............+++.++||++++++  +.+++.|  .+|+|+++|+.++|+++
T Consensus       329 ~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~v--Ggfd~~F~~~ED~Dl~lR~~~~G~ki  406 (657)
T 4fix_A          329 WTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEEL--GQPLPLFIKWDDADYGLRAAEHGYPT  406 (657)
T ss_dssp             EEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHH--CSCCSCSSSSHHHHHHHHHHHTTCCE
T ss_pred             ccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHh--CCChhHhccCcHHHHHHHHHHcCCeE
Confidence              00000000000000000    00001111122334556789999999999  5444332  36999999999999999


Q ss_pred             EEEEEEEEEecC
Q psy7267         310 AEVSVNWTEIEG  321 (569)
Q Consensus       310 ~~vPv~~~~~~G  321 (569)
                      .++|-....|.+
T Consensus       407 ~~~p~a~V~H~~  418 (657)
T 4fix_A          407 VTLPGAAIWHMA  418 (657)
T ss_dssp             EEEEEEEEEECC
T ss_pred             EEECCEEEEEcC
Confidence            999966555553

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=99.85  E-value=6.7e-23  Score=234.27  Aligned_cols=194  Identities=14%  Similarity=0.169  Sum_probs=0.0

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCCh
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGK  168 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gk  168 (569)
                      +|+||||||+||+++.|.++|+|+++|      +|+  ++|||||||||+|+|.++++++.++++ ++++++++++|.|.
T Consensus         1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Q------t~~--~~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~i~~~~n~G~   71 (729)
T 3l7i_A            1 MNKLTIIVTYYNAEEYITGCLESIKQQ------RTQ--DFNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRFIDLDENSGH   71 (729)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CceEEEEEEcCCCHHHHHHHHHHHHhC------CCC--CeEEEEEECCCCCcHHHHHHHHHHhCC-CCEEEEECCCCCCH
Confidence            467999999999999999999999998      444  789999999999999999999987753 58999998999999


Q ss_pred             HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHH
Q psy7267         169 GGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNI  248 (569)
Q Consensus       169 a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~  248 (569)
                      +.|+|.|++.|+||||+++|+|+.++|++|+++++.+++.                +++++.......+....... ...
T Consensus        72 ~~arN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~----------------d~v~~~~~~~~~~~~~~~~~-~~~  134 (729)
T 3l7i_A           72 AHARNIALEEVETPYFMFLDADDELASYAITFYLEKFNNT----------------DGLIAPIHSFTTQRPQFVDL-DRV  134 (729)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhcCC----------------CEEEEeeEEeecCCCccccc-cce
Confidence            9999999999999999999999999999999999999842                34444332221111000000 000


Q ss_pred             hhhhhhhHhhhcccccccccccceeeEeHHHHHHHhcc-ccCCc--hhhchHHHHHHHHcCCCEEEE
Q psy7267         249 LMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSS-IHVQR--WAFDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       249 ~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~-~~~e~--~~~D~EL~~Ra~~~G~rI~~v  312 (569)
                      ......  ........+....++..++||++++++  + .+++.  +.+|.+++.|+...|.++.++
T Consensus       135 ~~~~~~--~~~~~~~~~~~~~~~~~~~rr~~l~~~--gl~fde~~~~~ED~d~~~rl~~~g~~i~~~  197 (729)
T 3l7i_A          135 RVEYFN--AKENINSFLRKQSACNIIFRTAIVRAH--HIRFNENLNTYVDWSFVLEYMKYVNKFVRI  197 (729)
T ss_dssp             -------------------------------------------------------------------
T ss_pred             eeeeec--chhhHHHHhhccchhheeeeHHHHHHc--CCCcCCCCCcccCHHHHHHHHHhcCCEEEe
Confidence            000000  000000111122344579999999998  4 34454  567999999999999999888

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*

Probab=99.70  E-value=3.6e-17  Score=163.11  Aligned_cols=180  Identities=13%  Similarity=0.074  Sum_probs=113.2

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      .++.+||| |+||+++.|.+||+|+.+++..+.      .+|||||||+|+|.                         .|
T Consensus        14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~------~~EiIVVDn~s~d~-------------------------~g   61 (249)
T 2nxv_A           14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPD------KAEFLAADNREGNQ-------------------------FH   61 (249)
T ss_dssp             CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTT------TEEEEEEECTTSCS-------------------------CC
T ss_pred             CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCC------cEEEEEEECCCCCc-------------------------cc
Confidence            35679975 679999999999998877644321      28999999999872                         36


Q ss_pred             hHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeee-cccccchhhHHHH
Q psy7267         168 KGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAH-LEALANVQRSFFR  246 (569)
Q Consensus       168 ka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~-~~~~~~~~~~~~r  246 (569)
                      .+.|+|.|+++|+|||++++|+|+.+++++|+++++.++++.         ...++.+++ |.... ....+...  ...
T Consensus        62 ~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~---------~~~~~vg~v-g~~~~~~~~~g~~~--~~~  129 (249)
T 2nxv_A           62 GFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALE---------EADPKWLVA-GVAGSPWRPLNHSV--TAQ  129 (249)
T ss_dssp             TTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHH---------HHCTTEEEE-ESEEEESSCSCTTS--CCC
T ss_pred             HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcc---------cCCCCeeEE-eecccccCCCCcee--eec
Confidence            789999999999999999999999999999999999998620         000122222 21111 11000000  000


Q ss_pred             HHhhhhhhh--Hhhh-cccccccccccceeeEeHHHHHHHhccccCC---ch-hhchHHHHHHHHcCCCEEEEEEEEE
Q psy7267         247 NILMKGFHF--IVWF-TGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RW-AFDVELLFIAEVLHIPMAEVSVNWT  317 (569)
Q Consensus       247 ~~~~~~~~~--l~~~-~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~-~~D~EL~~Ra~~~G~rI~~vPv~~~  317 (569)
                      .. ......  .... .....+....+++.++||++   +  +.++|   +| .+|+|++.|++++|+++.++|....
T Consensus       130 ~~-~~~~~~~~~~~~~~~~~~v~~~~g~~~~~rr~~---~--~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~v~  201 (249)
T 2nxv_A          130 AL-HISDVFGNDRRRGNVPCRVESLDECFLLMRRLK---P--VLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFHLH  201 (249)
T ss_dssp             EE-EEEETTEEEEEESCSSEEEEEECTTEEEEETTB---C--CCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCCCE
T ss_pred             cc-ccCCccccccccCCCceEcCeeeeEeeEEEHhh---h--CCCCCCCCCcceehhHHHHHHHHcCCeEEEeccEEE
Confidence            00 000000  0000 00111222345677889988   3  23443   23 3699999999999999999886433

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*

Probab=99.69  E-value=3e-16  Score=165.97  Aligned_cols=233  Identities=15%  Similarity=0.106  Sum_probs=146.7

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH------HHHHHHHhHhhCCCeEEEEEcC
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT------MQVVHQYTEKCGEDIVRGLKLL  163 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T------~eil~~~~~~~~~~~V~vi~~~  163 (569)
                      .++|||||+|||+..   .+..+++++       |. .+|||+|||||+|+|      .++++++.+..+ ..+.+++..
T Consensus        51 ~~iSVVIP~yNEE~~---lI~~vL~~i-------~~-~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~-~~~~Vl~~~  118 (394)
T 2zu9_A           51 GKMAVIVPMKNEKLH---LVDGVLKAI-------PH-KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTH-SKIIMIHQK  118 (394)
T ss_dssp             TTEEEEEEESSCCHH---HHHHHHHHS-------CT-TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHC-CCEEEEETT
T ss_pred             CCEEEEEecCcccHH---HHHHHHHcC-------CC-CcEEEEEECcCcccccchhhHHHHHHHHhhccc-cceEEEecC
Confidence            369999999999954   366666542       21 579999999997777      778888766543 455666643


Q ss_pred             C----------------------CCChHHHHHHHHHhc---cCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCcccccc
Q psy7267         164 K----------------------NRGKGGAVTLGTKCA---RGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKN  218 (569)
Q Consensus       164 ~----------------------n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~  218 (569)
                      .                      +.||+.|+..|+.+|   ++|+|+++|||. ..|..+.++++.+...-       . 
T Consensus       119 ~p~v~~~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~-------~-  189 (394)
T 2zu9_A          119 DPGLAKAFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGF-------L-  189 (394)
T ss_dssp             CHHHHHHHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHH-------H-
T ss_pred             CcchhHHhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhcc-------c-
Confidence            3                      259999999999999   999999999999 67888877777665310       0 


Q ss_pred             CCCCCceEE-Eeeeeecc--cccc--hhhHHHHHHhhhhhhhHhhhcccccc---cccccceeeEeHHHHHHHhccccCC
Q psy7267         219 NAAGCNGVI-VGSRAHLE--ALAN--VQRSFFRNILMKGFHFIVWFTGVRTI---RDTQCGFKLFTRKSALQLFSSIHVQ  290 (569)
Q Consensus       219 ~~~~g~dvV-~G~r~~~~--~~~~--~~~~~~r~~~~~~~~~l~~~~~~~~i---~d~~~gf~lfrR~al~~I~~~~~~e  290 (569)
                      -...++++| .+.+....  .+..  ........+..+..+.+.+.+.+...   ..+.+|+++|+|++++++  .+. .
T Consensus       190 ~a~~~~dmVR~~~r~~~~~~~~rl~~~~~GRv~rl~~r~Ln~L~~~l~g~~~d~~~tplsGe~A~rr~ll~~L--~~~-~  266 (394)
T 2zu9_A          190 MSESEYTMVRLHWRHKPKVTKGTLYFKKWGRVSEITNHYLNLLVSEHTAFETTIMVTGNAGEHAMTMKLAEIL--PFS-T  266 (394)
T ss_dssp             HCCSSSEEEEEECC-----------------HHHHHHHHHHHHHHHHHSSCCCCCCCTTCSSEEEEHHHHTTC--CEE-S
T ss_pred             ccccccceeeeccccccccccccccccCCCceehhHHHHHHHHHHHhcCccccCcCCCCchhhHhhHHHHhcC--CCC-C
Confidence            001346777 55443210  0000  01112222333333333333333221   124458999999999988  443 6


Q ss_pred             chhhchHHHHHHHHc----------------CCCEEEEEEEEEEecCCccchhHHHHHHHHHHHHHHHHhcchh
Q psy7267         291 RWAFDVELLFIAEVL----------------HIPMAEVSVNWTEIEGSKIVPVFSWIQMGWDVLNIWLHYTLGL  348 (569)
Q Consensus       291 ~~~~D~EL~~Ra~~~----------------G~rI~~vPv~~~~~~GS~~~~~~~~~~~~~~~l~~r~ry~~g~  348 (569)
                      +|..+.+++..+.+.                |.+|.++...+.+-  +.-....+..+|....+...+|-.+..
T Consensus       267 gyGvE~~lLv~~~r~~~~~~~~~~~~~~~~~g~~I~qve~~~pH~--H~~~g~~~l~~M~~~~~~~i~~~~l~~  338 (394)
T 2zu9_A          267 GYSIEPYEIVYILERFGKWENVEEFKDVFDQGIEIFQIETLNPHF--HEDKGKEHVKEMLLLSLATIYHSKLAT  338 (394)
T ss_dssp             GGGHHHHHHHHHHHHHSSCCSCGGGHHHHHHCEEEEEEECSSCCC--BCCCCHHHHHHHHHHHHHHHHTSTTCC
T ss_pred             CCCCCHHHHHHHHHhhCccccccccccccccCceEEEEeccCCcc--ccccchhHHHHHHHHHHHHHHhhhccC
Confidence            899999999998888                77888776542211  111245566777777777766665543

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...

Probab=99.60  E-value=6.3e-16  Score=158.19  Aligned_cols=149  Identities=15%  Similarity=0.173  Sum_probs=103.9

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      ..|+||||||+||+++.|.++|+++...+..   +|+  ++||+||||+ +|+                        ..+
T Consensus        63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q---~~~--~~EIiVVdds-~d~------------------------~f~  112 (287)
T 2fy7_A           63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQR---QQL--DYGIYVINQA-GDT------------------------IFN  112 (287)
T ss_dssp             CSCEEEEEEEESSCHHHHHHHHHHHHHHHHH---TTC--EEEEEEEEEC-SSS------------------------CCC
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHH---hcC--CceEEEEEeC-CCC------------------------ccc
Confidence            4678999999999999999999999953333   333  7999999993 331                        126


Q ss_pred             hHHHHHHHH----HhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhH
Q psy7267         168 KGGAVTLGT----KCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRS  243 (569)
Q Consensus       168 ka~AlN~Gl----~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~  243 (569)
                      ++.|+|.|+    +.|+||||+++|+|+.+.+++..        .    ..+      ..... .. .. .+      . 
T Consensus       113 ~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~--------~----~~~------~~p~~-~~-~~-~~------~-  164 (287)
T 2fy7_A          113 RAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNA--------Y----RCF------SQPRH-IS-VA-MD------K-  164 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSC--------C----SCC------SSCEE-CC-CE-EG------G-
T ss_pred             hhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcce--------E----ecC------CCCce-EE-Ee-ec------c-
Confidence            788999999    89999999999999999998510        0    001      00010 00 00 00      0 


Q ss_pred             HHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHHHHHcCCCEEE
Q psy7267         244 FFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFIAEVLHIPMAE  311 (569)
Q Consensus       244 ~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~Ra~~~G~rI~~  311 (569)
                          +   .+        ........+++.+++|++++++  +.+++.+    .+|.||+.|+.++|+++..
T Consensus       165 ----~---~~--------~~~~~~~~G~~~~~rr~~f~~v--gGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~  219 (287)
T 2fy7_A          165 ----F---GF--------SLPYVQYFGGVSALSKQQFLTI--NGFPNNYWGWGGEDDDIFNRLVFRGMSISR  219 (287)
T ss_dssp             ----G---TT--------SCSSTTCCCSEEEEEHHHHHHT--TSCCSCCSSCSCHHHHHHHHHHHTTCCCBC
T ss_pred             ----c---cc--------CCCcCceeeeEEEEEHHHHHHc--CCCCccccccccchHHHHHHHHHcCCeEEe
Confidence                0   00        0112234467889999999999  5555543    2899999999999999883

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*

Probab=99.58  E-value=1.8e-14  Score=149.06  Aligned_cols=170  Identities=15%  Similarity=0.097  Sum_probs=117.5

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccH---HHHHHHHhHh-hCCCeEEEEEcCC
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKT---MQVVHQYTEK-CGEDIVRGLKLLK  164 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T---~eil~~~~~~-~~~~~V~vi~~~~  164 (569)
                      .+++|||||+|||+.   .+|+++++|+..        ++|||+|||||+|+|   .++++++.+. .  .++.+++ ++
T Consensus        52 ~~klSIVVPvYNEe~---~lLesVl~qi~~--------d~eIIlVdDGS~D~s~~e~dil~~~~~~~~--~ri~viH-Qk  117 (391)
T 2wvl_A           52 LEQTAIVVPTRNERL---KLLEGVLSGIPH--------EALILVASNSSPDRFQMERDLLEEFAHLTE--RPALIFH-QK  117 (391)
T ss_dssp             HTTEEEEEEESSCCH---HHHHHHHHTSCT--------TSEEEEEECCCHHHHHHHHHHHHHHHHHTT--CCEEEEE-TT
T ss_pred             HhceEEEEeccCcHH---HHHHHHHhcCCC--------CceEEEEECCCCCChHhHHHHHHHHHhhcc--cceEEEe-cc
Confidence            357999999999996   468888887432        789999999999999   6788898863 4  6888887 55


Q ss_pred             CCChHHH-----------------------HHHHHHhc---cCcEEEEEcCCCCCChhhHHHHHHHHHh--ccCCCcccc
Q psy7267         165 NRGKGGA-----------------------VTLGTKCA---RGSIILFADADGATKFADLEKLEDKLKE--LTDGDYIED  216 (569)
Q Consensus       165 n~Gka~A-----------------------lN~Gl~~A---~gd~Vv~lDaD~~~~pd~L~~lv~~~~~--~~~~~~~g~  216 (569)
                      |.|.+.|                       +-.|+..|   .++||.|+|||+.++.+..+.+......  ..       
T Consensus       118 n~gls~Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a-------  190 (391)
T 2wvl_A          118 DPALAEALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMA-------  190 (391)
T ss_dssp             CHHHHHHHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHC-------
T ss_pred             ChHHHHHHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhccc-------
Confidence            5555544                       44578887   6999999999999966554443322221  00       


Q ss_pred             ccCCCCCceEE-Eeeeeecc-----cccchhhHHHHHHhhhhhhhHhhhcccccc---cccccceeeEeHHHHHHH
Q psy7267         217 KNNAAGCNGVI-VGSRAHLE-----ALANVQRSFFRNILMKGFHFIVWFTGVRTI---RDTQCGFKLFTRKSALQL  283 (569)
Q Consensus       217 ~~~~~~g~dvV-~G~r~~~~-----~~~~~~~~~~r~~~~~~~~~l~~~~~~~~i---~d~~~gf~lfrR~al~~I  283 (569)
                          ...+++| ++.|....     ...+..+...+...++.++.+.....+..-   .....|=-+++-+..+.+
T Consensus       191 ----~s~~~MVRI~wR~kPK~~~~~~l~f~k~Grvs~itNr~lN~Lis~~~g~et~ii~TgNAGEHAmt~~LA~~l  262 (391)
T 2wvl_A          191 ----KTPFAMVRILWRYKPKLTEDEGVVFRRYGRVSERNNRALNQLIGGVSGFETDVVKTANAGEHAMSLGLALRL  262 (391)
T ss_dssp             ----CSSEEEEEEECCCCC------CCHHHHTHHHHHHHHHHHHHHHHHHHSSCCCCCCCSSCSSEEEEHHHHTTS
T ss_pred             ----CCCcceEEEecccCcccccCCceeEeecCccchhhHHHHHHHHHHhhCcccceEeccCchhhhhhHHHHHhc
Confidence                1346888 88887542     124455677778888888777766644332   222234467777777666

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*

Probab=98.78  E-value=1.3e-08  Score=106.44  Aligned_cols=104  Identities=16%  Similarity=0.178  Sum_probs=82.5

Q ss_pred             cEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEE---------
Q psy7267          91 NLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLK---------  161 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~---------  161 (569)
                      .++|||++||..+ +.++|++++++      +.+..+.+|||.|||+.++|.++++++..+     |..+.         
T Consensus         3 ~~pViI~~yNRp~-l~~~L~sL~~~------~p~~~~~~iivsdDgs~~~~~~vi~~~~~~-----I~~~~~~d~~~~~~   70 (343)
T 1fo8_A            3 VIPILVIACDRST-VRRCLDKLLHY------RPSAELFPIIVSQDCGHEETAQVIASYGSA-----VTHIRQPDLSNIAV   70 (343)
T ss_dssp             CCCEEEEESSCTT-HHHHHHHHHHH------CSCTTTSCEEEEECTTCHHHHHHHHTTGGG-----SEEEECSCCCCCCC
T ss_pred             cccEEEEECCcHH-HHHHHHHHHhc------CCCcCCcEEEEEECCCCHHHHHHHHHcCCc-----eEEEEcCCcccccc
Confidence            4789999999998 99999999987      333446799999999999999999887432     22222         


Q ss_pred             cCCCCChH----------HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHH
Q psy7267         162 LLKNRGKG----------GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLK  206 (569)
Q Consensus       162 ~~~n~Gka----------~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~  206 (569)
                      .++|.|..          .|+|.+++.+++|+++++|.|+.+.|++++-+.+.++
T Consensus        71 ~~~N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~  125 (343)
T 1fo8_A           71 QPDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYP  125 (343)
T ss_dssp             CTTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHH
T ss_pred             chhhcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHH
Confidence            24565643          6788888888999999999999999999977666664

>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}

Probab=97.93  E-value=2.3e-05  Score=74.94  Aligned_cols=107  Identities=11%  Similarity=-0.020  Sum_probs=72.9

Q ss_pred             hccCcEEEEEcCC---CCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhHHHHHHhhhhhh
Q psy7267         178 CARGSIILFADAD---GATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFH  254 (569)
Q Consensus       178 ~A~gd~Vv~lDaD---~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~~~~~~  254 (569)
                      ..+.|+++++|||   ...+|+.+.++++                  .++|+|+|++.......          .+....
T Consensus        51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl~------------------~g~DVV~GsYp~K~~~~----------~s~~a~  102 (203)
T 2c0n_A           51 MKDYDTLAFLDEDVVPIEIDFQKVEAKFN------------------EGYDVVCGYYYLKTLRG----------YSVYRK  102 (203)
T ss_dssp             CTTCCEEEEECTTEEEEECCHHHHHHHHH------------------HTCSEEEEECBCTTSSS----------BSEESS
T ss_pred             cCCCCEEEEEeCCCCccccCHHHHHHHHh------------------CCCCEEEEEeeccCCCc----------cchHHH
Confidence            3567999999999   9999999999982                  25699999997542111          111111


Q ss_pred             hHhhhcccccccccccceeeEeHHHHHHHhcccc--------CCchhhchHHHHHHHHcCCCEEEE
Q psy7267         255 FIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIH--------VQRWAFDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       255 ~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~--------~e~~~~D~EL~~Ra~~~G~rI~~v  312 (569)
                      .+.....+.++.+.++||++++|++++++...++        ....++|+.++..+..+|+.+.-.
T Consensus       103 ~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~  168 (203)
T 2c0n_A          103 DWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSL  168 (203)
T ss_dssp             SBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEE
T ss_pred             HHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEecccccccccccc
Confidence            2222334457889999999999999999822211        124457888998887777665433

>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}

Probab=97.57  E-value=0.0005  Score=69.30  Aligned_cols=149  Identities=15%  Similarity=0.144  Sum_probs=102.7

Q ss_pred             CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCC
Q psy7267          87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNR  166 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~  166 (569)
                      .+.-+|+||||.+|.++.|...|.-+...+..|..     .+.|+||+..  |                       ....
T Consensus        48 ~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l-----~y~I~VieQ~--~-----------------------~~~F   97 (287)
T 3lw6_A           48 ASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV-----AHHIFVLNQV--D-----------------------RFRF   97 (287)
T ss_dssp             CCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC-----EEEEEEEEEC--S-----------------------SSCC
T ss_pred             CCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC-----ceEEEEEecC--C-----------------------CCcc
Confidence            34567999999999999999999999999988766     7889998763  2                       1245


Q ss_pred             ChHHHHHHHHHhcc--CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEe---eeeecccccchh
Q psy7267         167 GKGGAVTLGTKCAR--GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVG---SRAHLEALANVQ  241 (569)
Q Consensus       167 Gka~AlN~Gl~~A~--gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G---~r~~~~~~~~~~  241 (569)
                      .+|..+|.|+..|.  .|+++|=|.|..+..|..                          ...+.   ...+.....   
T Consensus        98 NRa~LlNvGf~ea~~~~d~~ifHDVDLlP~dd~n--------------------------~Y~c~~~~~P~Hls~~~---  148 (287)
T 3lw6_A           98 NRASLINVGFQFASDVYDYIAMHDVDLLPLNDNL--------------------------LYEYPSSLGPLHIAGPK---  148 (287)
T ss_dssp             CHHHHHHHHHHHSCTTCCEEEEECTTEEECCTTS--------------------------CCCCCCTTCCEESSCTT---
T ss_pred             chhheecccHHHHhccCCEEEEecccccccCCCc--------------------------cccCCCCCCceEEeecc---
Confidence            68889999999985  599999999986542210                          00010   011111000   


Q ss_pred             hHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC---ch-hhchHHHHHHHHcCCCEEEEE
Q psy7267         242 RSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RW-AFDVELLFIAEVLHIPMAEVS  313 (569)
Q Consensus       242 ~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~-~~D~EL~~Ra~~~G~rI~~vP  313 (569)
                                       ..........-+|..+++|+.+.++  +.+++   +| .+|.|+..|+..+|+++...+
T Consensus       149 -----------------~~~~~~Y~~~~GGv~a~~re~f~kV--NGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~  205 (287)
T 3lw6_A          149 -----------------LHPKYHYDNFVGGILLVRREHFKQM--NGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQ  205 (287)
T ss_dssp             -----------------TCSSCCCTTCCCSEEEEEHHHHHHT--TSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCS
T ss_pred             -----------------ccCCCCcCCccccEEeccHHHHHHc--CCCCCcCcCCCccchHHHHHHHHcCCcEEcCC
Confidence                             0000122233457789999999999  44443   33 369999999999999988764

>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0

Probab=96.12  E-value=0.042  Score=54.61  Aligned_cols=102  Identities=21%  Similarity=0.275  Sum_probs=58.3

Q ss_pred             cEEEEEeecCCCCChH----------HHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEE
Q psy7267          91 NLSVIVPAYNEQDRLK----------PMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGL  160 (569)
Q Consensus        91 ~VSVIIP~yNE~~~I~----------~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi  160 (569)
                      ++.+|||+......++          -.|..+++.+....      --+|+|+-|  ++.    ++++..++   +++++
T Consensus         9 ~~~aIIlA~G~stRl~~K~L~~i~GkPli~~~l~~l~~~~------i~~VvVvt~--~~~----i~~~~~~~---g~~v~   73 (256)
T 3tqd_A            9 EFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIKSG------AEEVVIATD--DKR----IRQVAEDF---GAVVC   73 (256)
T ss_dssp             CCEEEEECCCC---CTTGGGCEETTEEHHHHHHHHHHHTT------CSEEEEEES--CHH----HHHHHHHT---TCEEE
T ss_pred             CceEEEEcCCCCCCCCCCCeeeECCchHHHHHHHHHHhCC------CCEEEEECC--HHH----HHHHHHHc---CCeEE
Confidence            4566666655554432          13444444433311      237777754  232    33333333   34444


Q ss_pred             Ec--CCCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHHHHHHHhc
Q psy7267         161 KL--LKNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKLEDKLKEL  208 (569)
Q Consensus       161 ~~--~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~  208 (569)
                      ..  +...|.+. +..|++..   ..|+++++++|. .++++.+.++++.+.+.
T Consensus        74 ~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~  126 (256)
T 3tqd_A           74 MTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEH  126 (256)
T ss_dssp             ECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHC
T ss_pred             EeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhC
Confidence            32  23456554 56677765   579999999999 56899999999999763

>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*

Probab=95.60  E-value=0.061  Score=53.67  Aligned_cols=103  Identities=20%  Similarity=0.242  Sum_probs=63.3

Q ss_pred             CccEEEEEeecCCCCChH----------HHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEE
Q psy7267          89 SVNLSVIVPAYNEQDRLK----------PMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVR  158 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~----------~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~  158 (569)
                      .+++.+|||+-.....++          ..|..+++.+....      --+|+|+-|  .+.    ++++..++   ++.
T Consensus        16 ~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~~------i~~IvV~t~--~~~----i~~~~~~~---g~~   80 (264)
T 3k8d_A           16 HMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG------AERIIVATD--HED----VARAVEAA---GGE   80 (264)
T ss_dssp             --CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHTT------CSEEEEEES--CHH----HHHHHHHT---TCE
T ss_pred             CCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhCC------CCEEEEECC--HHH----HHHHHHHc---CCE
Confidence            356788888888877776          24455555544321      237877764  232    33333333   344


Q ss_pred             EEE--cCCCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHHHHHHHh
Q psy7267         159 GLK--LLKNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKLEDKLKE  207 (569)
Q Consensus       159 vi~--~~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~  207 (569)
                      ++.  .....|.+. +..+++..   ..|+++++++|. .++++.+.++++.+.+
T Consensus        81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~  134 (264)
T 3k8d_A           81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQ  134 (264)
T ss_dssp             EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHT
T ss_pred             EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhh
Confidence            443  233456554 55555554   579999999998 4689999999999876

>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*

Probab=94.36  E-value=0.33  Score=51.23  Aligned_cols=72  Identities=14%  Similarity=0.104  Sum_probs=50.2

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-CcEEEEEcCCC-CCChhhHHHHHHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-GSIILFADADG-ATKFADLEKLEDKLK  206 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-gd~Vv~lDaD~-~~~pd~L~~lv~~~~  206 (569)
                      +|+|+-+...    +.++++..+   .+++++..+...|-+.++..|++... .|.++++++|. .+.++.++++++.+.
T Consensus        53 ~i~vv~~~~~----~~i~~~~~~---~~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~  125 (459)
T 4fce_A           53 HVHLVYGHGG----ELLKKTLAD---PSLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKP  125 (459)
T ss_dssp             CEEEEESSCH----HHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred             cEEEEeCCCH----HHHHHHhcc---CCcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHh
Confidence            6777764332    233333222   35667766777899999999999886 48999999998 578899999988765


Q ss_pred             h
Q psy7267         207 E  207 (569)
Q Consensus       207 ~  207 (569)
                      +
T Consensus       126 ~  126 (459)
T 4fce_A          126 E  126 (459)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13

Probab=94.06  E-value=0.75  Score=44.93  Aligned_cols=69  Identities=14%  Similarity=0.089  Sum_probs=44.2

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEE--cCCCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLK--LLKNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKLE  202 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~--~~~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~lv  202 (569)
                      +|+|+-|  .+    .++++..++   +++++.  .+...|.+. ...+++..   ..|.++++++|. .++++.+.+++
T Consensus        44 ~ivVv~~--~~----~i~~~~~~~---g~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~  113 (252)
T 3oam_A           44 RVIIATD--DE----RVEQAVQAF---GGVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVA  113 (252)
T ss_dssp             EEEEEES--CH----HHHHHHHHT---TCEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHH
T ss_pred             eEEEECC--HH----HHHHHHHHc---CCEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHH
Confidence            7777764  23    233333333   344443  234466666 34455554   579999999999 57899999999


Q ss_pred             HHHHh
Q psy7267         203 DKLKE  207 (569)
Q Consensus       203 ~~~~~  207 (569)
                      +.+.+
T Consensus       114 ~~~~~  118 (252)
T 3oam_A          114 DNLAA  118 (252)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99876

>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13

Probab=93.65  E-value=1.2  Score=42.54  Aligned_cols=70  Identities=14%  Similarity=0.122  Sum_probs=46.7

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC-----CCChHHHHHHHHHhc-cCcEEEEEcCCCC-CChhhHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK-----NRGKGGAVTLGTKCA-RGSIILFADADGA-TKFADLEKL  201 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~-----n~Gka~AlN~Gl~~A-~gd~Vv~lDaD~~-~~pd~L~~l  201 (569)
                      +|+|+-|  .|.    ++++..++   ++.++..++     ..+-..++..|++.. ..|+++++++|.. ++++.+.++
T Consensus        46 ~ivv~~~--~~~----i~~~~~~~---g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l  116 (229)
T 1qwj_A           46 SVWVSTD--HDE----IENVAKQF---GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKV  116 (229)
T ss_dssp             EEEEEES--CHH----HHHHHHHT---TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHH
T ss_pred             EEEEECC--hHH----HHHHHHHc---CCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHH
Confidence            7777764  232    23333332   345555432     234456778888877 5799999999985 588999999


Q ss_pred             HHHHHh
Q psy7267         202 EDKLKE  207 (569)
Q Consensus       202 v~~~~~  207 (569)
                      ++.+.+
T Consensus       117 ~~~~~~  122 (229)
T 1qwj_A          117 AEMIRE  122 (229)
T ss_dssp             HHHHHS
T ss_pred             HHHHHh
Confidence            998876

>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A

Probab=93.65  E-value=0.79  Score=45.18  Aligned_cols=71  Identities=11%  Similarity=0.095  Sum_probs=45.4

Q ss_pred             eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEc-C-CCCChHHHHHHHHHhc---cCcEEEEEcCCC-CCChhhHHHH
Q psy7267         128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKL-L-KNRGKGGAVTLGTKCA---RGSIILFADADG-ATKFADLEKL  201 (569)
Q Consensus       128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~-~-~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~-~~~pd~L~~l  201 (569)
                      -+|+|+-|.  +    .++++..++   ++.++.. + ...|. .++..|++..   ..|+++++++|. .++++.+.++
T Consensus        43 ~~vvVvt~~--~----~i~~~~~~~---g~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~l  112 (253)
T 4fcu_A           43 DDLCVATDD--E----RIAEICRAE---GVDVVLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQV  112 (253)
T ss_dssp             CEEEEEESC--H----HHHHHHHTT---TCCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHH
T ss_pred             CEEEEECCH--H----HHHHHHHHc---CCeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHH
Confidence            378887652  2    233333333   3344432 2 23343 3566677765   359999999999 5689999999


Q ss_pred             HHHHHhc
Q psy7267         202 EDKLKEL  208 (569)
Q Consensus       202 v~~~~~~  208 (569)
                      ++.+.+.
T Consensus       113 i~~~~~~  119 (253)
T 4fcu_A          113 AKLLVDK  119 (253)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9999774

>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*

Probab=92.82  E-value=1.5  Score=47.21  Aligned_cols=193  Identities=15%  Similarity=0.150  Sum_probs=106.2

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTL  174 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~  174 (569)
                      ++|+.|.. .|...|+.+.+.    .      .-||+||-..-.|.-.+.+.++...++ .+++++..++..|-|.|+..
T Consensus        34 l~pv~gkp-~i~~~l~~~~~~----g------~~~i~vv~~~~~~~i~~~~~~~~~~~~-~~i~~~~q~~~lGTa~Av~~  101 (501)
T 3st8_A           34 LHTLAGRS-MLSHVLHAIAKL----A------PQRLIVVLGHDHQRIAPLVGELADTLG-RTIDVALQDRPLGTGHAVLC  101 (501)
T ss_dssp             GCEETTEE-HHHHHHHHHHHH----C------CSEEEEEECTTHHHHHHHHHHHHHHHT-SCCEEEECSSCCCHHHHHHH
T ss_pred             HeEECChh-HHHHHHHHHHhC----C------CCEEEEEeCCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCCCcHHHHHH
Confidence            67888864 556666655553    1      337888776444444455554444443 56888887888999999999


Q ss_pred             HHHhccC---cEEEEEcCCC-CCChhhHHHHHHHHHhccCC-CccccccCCCCCceEEEeeeeecccccchhhHHHHHHh
Q psy7267         175 GTKCARG---SIILFADADG-ATKFADLEKLEDKLKELTDG-DYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNIL  249 (569)
Q Consensus       175 Gl~~A~g---d~Vv~lDaD~-~~~pd~L~~lv~~~~~~~~~-~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~~~r~~~  249 (569)
                      ++.....   +.++++.+|. ....+.+.+|++........ .+.......+.+++.+.-.....- .......-.    
T Consensus       102 a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~g~v-~~ivEk~~~----  176 (501)
T 3st8_A          102 GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEV-MAIVEQTDA----  176 (501)
T ss_dssp             HHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTTCCE-EEEECGGGC----
T ss_pred             HHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccceeE-EeeccccCC----
Confidence            9988754   3566666666 56788899999887764211 111111222233333321100000 000000000    


Q ss_pred             hhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccC---CchhhchHHHHHHHHcCCCEEEEE
Q psy7267         250 MKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHV---QRWAFDVELLFIAEVLHIPMAEVS  313 (569)
Q Consensus       250 ~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~---e~~~~D~EL~~Ra~~~G~rI~~vP  313 (569)
                               .-....+....+|..+|..+.+++++.....   ..-.+-++....+...|..+....
T Consensus       177 ---------~~~~~~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~~v~~~~  234 (501)
T 3st8_A          177 ---------TPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASH  234 (501)
T ss_dssp             ---------CHHHHHCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTCCEEEEE
T ss_pred             ---------ChhhccceeeeceeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCceEEEEe
Confidence                     0000112234467889999999988544332   222235566666778888776554

>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*

Probab=91.66  E-value=3.2  Score=43.51  Aligned_cols=72  Identities=17%  Similarity=0.142  Sum_probs=50.6

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-CcEEEEEcCCCC-CChhhHHHHHHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-GSIILFADADGA-TKFADLEKLEDKLK  206 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-gd~Vv~lDaD~~-~~pd~L~~lv~~~~  206 (569)
                      +|+|+-+...    +.++++..+   .+++++..+...|.+.++..|++... .|+++++++|.. +.++.++++++.+.
T Consensus        50 ~iivv~~~~~----~~i~~~~~~---~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~  122 (456)
T 2v0h_A           50 NIHLIYGHGG----DLMRTHLAN---EQVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKP  122 (456)
T ss_dssp             CEEEEECTTH----HHHHHHTTT---CCCEEEECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCC
T ss_pred             cEEEEeCCCH----HHHHHHhhc---CCcEEEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHh
Confidence            6666654321    233333222   24666666667899999999998875 799999999994 68888999887764


Q ss_pred             h
Q psy7267         207 E  207 (569)
Q Consensus       207 ~  207 (569)
                      +
T Consensus       123 ~  123 (456)
T 2v0h_A          123 E  123 (456)
T ss_dssp             T
T ss_pred             c
Confidence            4

>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*

Probab=91.56  E-value=0.81  Score=45.34  Aligned_cols=101  Identities=20%  Similarity=0.280  Sum_probs=64.2

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC--CccHHHHHHHHhHhhCCCeEEEEEcCC--
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS--TDKTMQVVHQYTEKCGEDIVRGLKLLK--  164 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS--tD~T~eil~~~~~~~~~~~V~vi~~~~--  164 (569)
                      .|.|-||-|+|.......+ |-.+...+..    =|  ++.-|||+|+.  ++.+.+++++..-.     .+.+..+.  
T Consensus         2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~----Vp--~L~WIVVEd~~~~t~~va~lL~~sgl~-----y~HL~~~~p~   69 (253)
T 1v84_A            2 LPTIHVVTPTYSRPVQKAE-LTRMANTLLH----VP--NLHWLVVEDAPRRTPLTARLLRDTGLN-----YTHLHVETPR   69 (253)
T ss_dssp             CCEEEEEEEECCSTTHHHH-HHHHHHHHTT----SS--SEEEEEEESSSSCCHHHHHHHHHHCCE-----EEEEECCCCH
T ss_pred             CCEEEEEeCCCCccchhHH-HHHHhhhhcc----CC--ceEEEEEeCCCCCCHHHHHHHHHcCCc-----eEEeecCCCc
Confidence            4679999999998765544 3344443332    13  78999999965  67788888774321     12222121  


Q ss_pred             C------------CChHHHHHHHHHhcc---------CcEEEEEcCCCCCChhhHHHH
Q psy7267         165 N------------RGKGGAVTLGTKCAR---------GSIILFADADGATKFADLEKL  201 (569)
Q Consensus       165 n------------~Gka~AlN~Gl~~A~---------gd~Vv~lDaD~~~~pd~L~~l  201 (569)
                      +            ..-...+|.|+++.+         .-+|.|.|.|...+.+.++++
T Consensus        70 ~~~~~~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~em  127 (253)
T 1v84_A           70 NYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM  127 (253)
T ss_dssp             HHHCC-------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHH
T ss_pred             cccccccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHH
Confidence            1            112457999998764         247889999998886665553

>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A

Probab=90.91  E-value=1.1  Score=42.68  Aligned_cols=70  Identities=13%  Similarity=0.071  Sum_probs=45.2

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-----CCCChHHHHHHHHHhcc--CcEEEEEcCCCC-CChhhHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-----KNRGKGGAVTLGTKCAR--GSIILFADADGA-TKFADLEK  200 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-----~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~~-~~pd~L~~  200 (569)
                      +|+|+-+.  +..    +++.+++   ++.++..+     ...|...++..|++...  .|.++++++|.. ++++.+.+
T Consensus        47 ~ivvv~~~--~~i----~~~~~~~---~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~  117 (228)
T 1ezi_A           47 RIIVSTDG--GLI----AEEAKNF---GVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIRE  117 (228)
T ss_dssp             EEEEEESC--HHH----HHHHHHT---TCEEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHH
T ss_pred             EEEEECCC--HHH----HHHHHHc---CCEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHH
Confidence            78887652  222    2232333   24444433     23456778888888763  589999999985 58889999


Q ss_pred             HHHHHHh
Q psy7267         201 LEDKLKE  207 (569)
Q Consensus       201 lv~~~~~  207 (569)
                      +++.+.+
T Consensus       118 l~~~~~~  124 (228)
T 1ezi_A          118 AFSLFDE  124 (228)
T ss_dssp             HHTTCCT
T ss_pred             HHHHHHh
Confidence            9887654

>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*

Probab=90.87  E-value=3.9  Score=39.00  Aligned_cols=70  Identities=17%  Similarity=0.188  Sum_probs=45.7

Q ss_pred             eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC--CCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHH
Q psy7267         128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL--KNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDK  204 (569)
Q Consensus       128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~--~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~  204 (569)
                      -+|+||-+.  +.    ++++..++   ++.++..+  ...|.+.+. .|++....|.++++++|.. ++++.+.++++.
T Consensus        44 ~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~  113 (245)
T 1h7e_A           44 AEVWVATDD--PR----VEQAVQAF---GGKAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQG  113 (245)
T ss_dssp             CEEEEEESC--HH----HHHHHHHT---TCEEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHH
T ss_pred             CeEEEECCc--HH----HHHHHHHc---CCeEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHH
Confidence            378887652  32    23333332   35666643  234555544 5566667799999999986 588999999998


Q ss_pred             HHh
Q psy7267         205 LKE  207 (569)
Q Consensus       205 ~~~  207 (569)
                      +.+
T Consensus       114 ~~~  116 (245)
T 1h7e_A          114 MRD  116 (245)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            876

>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*

Probab=90.48  E-value=1.1  Score=45.00  Aligned_cols=102  Identities=18%  Similarity=0.207  Sum_probs=62.2

Q ss_pred             CCCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC--CccHHHHHHHHhHhhCCCeEEEEEcC-
Q psy7267          87 EPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS--TDKTMQVVHQYTEKCGEDIVRGLKLL-  163 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS--tD~T~eil~~~~~~~~~~~V~vi~~~-  163 (569)
                      ...|.|-||-|+|.......+ |-.+...+..    =|  ++--|||+|+.  ++.+.+++++..-.     .+.+..+ 
T Consensus        18 ~~~p~IivVTPTy~R~~Q~a~-LtRLa~TL~~----Vp--~L~WIVVEd~~~~t~~va~lL~rsGl~-----y~HL~~~~   85 (281)
T 3cu0_A           18 GSHMTIYVVTPTYARLVQKAE-LVRLSQTLSL----VP--RLHWLLVEDAEGPTPLVSGLLAASGLL-----FTHLVVLT   85 (281)
T ss_dssp             ---CEEEEEEEECCSTTHHHH-HHHHHHHHTT----SS--SEEEEEEESSSSCCHHHHHHHHHHCSE-----EEEEECCC
T ss_pred             CCCCeEEEEeCCCCCcchhHH-HHHHHHHHhc----CC--ceEEEEEcCCCCCCHHHHHHHHHcCCc-----eEEeccCC
Confidence            356789999999998765444 3334333332    13  78899999964  67778888774322     2222222 


Q ss_pred             -CCC------------ChHHHHHHHHHhcc-----------------CcEEEEEcCCCCCChhhHHH
Q psy7267         164 -KNR------------GKGGAVTLGTKCAR-----------------GSIILFADADGATKFADLEK  200 (569)
Q Consensus       164 -~n~------------Gka~AlN~Gl~~A~-----------------gd~Vv~lDaD~~~~pd~L~~  200 (569)
                       .+.            .-...+|.|++..+                 .-+|.|.|.|...+.+.+++
T Consensus        86 p~~~~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFde  152 (281)
T 3cu0_A           86 PKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEE  152 (281)
T ss_dssp             C-----------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHH
T ss_pred             CccccccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHH
Confidence             111            12467999998766                 13678999999888555544

>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}

Probab=89.90  E-value=1.4  Score=43.38  Aligned_cols=100  Identities=14%  Similarity=0.207  Sum_probs=61.1

Q ss_pred             CccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCC--ccHHHHHHHHhHhhCCCeEEEEEcC--C
Q psy7267          89 SVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGST--DKTMQVVHQYTEKCGEDIVRGLKLL--K  164 (569)
Q Consensus        89 ~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgSt--D~T~eil~~~~~~~~~~~V~vi~~~--~  164 (569)
                      .|.|-||-|+|.......+ |..+...+...    |  ++.-|||+|+..  +.+.+++++..-    + .+.+..+  .
T Consensus         2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~V----p--~l~WIVVEd~~~~~~~v~~lL~~sgl----~-y~HL~~~~~~   69 (246)
T 2d0j_A            2 LPTIYAITPTYSRPVQKAE-LTRLANTFRQV----A--QLHWILVEDAAARSELVSRFLARAGL----P-STHLHVPTPR   69 (246)
T ss_dssp             CCCEEEEEEECCSTTHHHH-HHHHHHHHTTS----T--TEEEEEEESSSSCCHHHHHHHHHSCS----C-EEEEECCCCC
T ss_pred             CCEEEEEeCCCCccchhHH-HHHHHHHHhcC----C--ceEEEEEcCCCCCCHHHHHHHHHcCC----c-eEEEecCCcc
Confidence            4668999999998765444 34444444322    3  578899999763  335666665321    1 2222212  1


Q ss_pred             CC------ChHHHHHHHHHhcc---------CcEEEEEcCCCCCChhhHHH
Q psy7267         165 NR------GKGGAVTLGTKCAR---------GSIILFADADGATKFADLEK  200 (569)
Q Consensus       165 n~------Gka~AlN~Gl~~A~---------gd~Vv~lDaD~~~~pd~L~~  200 (569)
                      |.      .-...+|.|+++.+         .-+|.|.|.|...+.+.+++
T Consensus        70 ~~~~~~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~e  120 (246)
T 2d0j_A           70 RYKRPGLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQE  120 (246)
T ss_dssp             C----CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHH
T ss_pred             ccCCCCCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHH
Confidence            11      12478999997753         25789999999888665555

>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}

Probab=89.84  E-value=1.5  Score=40.31  Aligned_cols=69  Identities=14%  Similarity=0.097  Sum_probs=47.1

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHHHHHhc--cCcEEEEEcCCCC-CChhhHHHHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTLGTKCA--RGSIILFADADGA-TKFADLEKLEDK  204 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~Gl~~A--~gd~Vv~lDaD~~-~~pd~L~~lv~~  204 (569)
                      +|+||-+...    +.++++...   .++.++..+ ...|.+.++..|++..  ..|+++++++|.. ++++.+.++++.
T Consensus        48 ~i~vv~~~~~----~~~~~~~~~---~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~  120 (199)
T 2waw_A           48 QLIVTLGGAA----DEVLEKVEL---DGLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG  120 (199)
T ss_dssp             EEEEEECTTH----HHHHHHSCC---TTSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred             cEEEEeCCCH----HHHHHHhcc---CCCEEEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh
Confidence            7777765322    223333222   234555533 3357788899999987  5699999999996 588999999987

>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0

Probab=89.10  E-value=7  Score=37.59  Aligned_cols=75  Identities=16%  Similarity=0.166  Sum_probs=48.9

Q ss_pred             EEEEEeCCCCc-cHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-------CcEEEEEcCCC-CCChhhHH
Q psy7267         129 EIIVVSDGSTD-KTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-------GSIILFADADG-ATKFADLE  199 (569)
Q Consensus       129 EIIVVDDgStD-~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-------gd~Vv~lDaD~-~~~pd~L~  199 (569)
                      +|+||-+.... ...+.++++.   ....+.++..  ..+...++..|++...       .|+|+++|+|. .++++.+.
T Consensus        50 ~ivvv~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~  124 (246)
T 3f1c_A           50 KILISSPKEWMNHAEDNIKKYI---SDDRIVVIEG--GEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIE  124 (246)
T ss_dssp             EEEEEECGGGHHHHHHHHHHHC---CCTTEEEEEC--CSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHH
T ss_pred             EEEEEeCHHHHHHHHHHHHHhC---CCCCEEEECC--CCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHH
Confidence            67777653221 1233333331   1135666652  3466777888887753       58999999997 57899999


Q ss_pred             HHHHHHHhc
Q psy7267         200 KLEDKLKEL  208 (569)
Q Consensus       200 ~lv~~~~~~  208 (569)
                      ++++.+.+.
T Consensus       125 ~li~~~~~~  133 (246)
T 3f1c_A          125 ENIDAALET  133 (246)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            999998873

>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A

Probab=88.68  E-value=1.3  Score=40.59  Aligned_cols=69  Identities=17%  Similarity=0.191  Sum_probs=46.1

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHHHHHhc--cCcEEEEEcCCC-CCChhhHHHHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTLGTKCA--RGSIILFADADG-ATKFADLEKLEDK  204 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~Gl~~A--~gd~Vv~lDaD~-~~~pd~L~~lv~~  204 (569)
                      +|+||-+...    +.++++...   .+++++..+ ...|.+.++..|++..  ..|.++++++|. .++++.++++++.
T Consensus        48 ~i~vv~~~~~----~~~~~~~~~---~~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~  120 (197)
T 2wee_A           48 QLILTLGGAA----SAVRAAMAL---DGTDVVVVEDVERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV  120 (197)
T ss_dssp             EEEEEECTTH----HHHHHHSCC---TTSEEEECC----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred             cEEEEeCCCH----HHHHHHhcc---CCCEEEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence            7777754321    223333222   235566543 2358889999999887  468999999999 4688999999987

>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*

Probab=88.43  E-value=1.7  Score=45.94  Aligned_cols=52  Identities=17%  Similarity=0.087  Sum_probs=43.1

Q ss_pred             eEEEEEcCCCCChHHHHHHHHHhcc--CcEEEEEcCCCC-CChhhHHHHHHHHHh
Q psy7267         156 IVRGLKLLKNRGKGGAVTLGTKCAR--GSIILFADADGA-TKFADLEKLEDKLKE  207 (569)
Q Consensus       156 ~V~vi~~~~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~~-~~pd~L~~lv~~~~~  207 (569)
                      ++.++..+...|.+.++..|++...  .|.++++++|.. +.++.++++++.+.+
T Consensus        75 ~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~  129 (468)
T 1hm9_A           75 QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHIN  129 (468)
T ss_dssp             SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred             CcEEEeCCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence            4566666667899999999988875  689999999995 688999999998876

>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}

Probab=87.48  E-value=6.9  Score=36.85  Aligned_cols=43  Identities=12%  Similarity=0.066  Sum_probs=34.8

Q ss_pred             CCChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHHHHhc
Q psy7267         165 NRGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDKLKEL  208 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~  208 (569)
                      ..|.+.++ .|++....|+++++++|. .++++.+.++++.+.+.
T Consensus        71 ~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~  114 (234)
T 2y6p_A           71 PSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKG  114 (234)
T ss_dssp             CSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHT
T ss_pred             ccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhC
Confidence            45666666 477777789999999999 77889999999988763

>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A

Probab=86.62  E-value=6.6  Score=36.89  Aligned_cols=72  Identities=15%  Similarity=0.046  Sum_probs=48.7

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc-------cCcEEEEEcCCCC-CChhhHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA-------RGSIILFADADGA-TKFADLEK  200 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A-------~gd~Vv~lDaD~~-~~pd~L~~  200 (569)
                      +|+||-+...+...+ +.++    +...+.++  ....|.+.++..|++..       ..|.++++++|.. ++++.+.+
T Consensus        52 ~ivvv~~~~~~~~~~-~~~~----~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~  124 (231)
T 1vgw_A           52 LTVVVVSPEDTFADK-VQTA----FPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALAR  124 (231)
T ss_dssp             EEEEECCTTCSTHHH-HHHH----CTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHH
T ss_pred             eEEEEECccHHHHHH-HHhc----CCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHH
Confidence            777776533333333 3322    11345544  34568888888888876       4699999999984 58899999


Q ss_pred             HHHHHHh
Q psy7267         201 LEDKLKE  207 (569)
Q Consensus       201 lv~~~~~  207 (569)
                      +++.+.+
T Consensus       125 l~~~~~~  131 (231)
T 1vgw_A          125 LIEQAGN  131 (231)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhh
Confidence            9998765

>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*

Probab=86.31  E-value=4.7  Score=39.37  Aligned_cols=51  Identities=12%  Similarity=0.049  Sum_probs=41.5

Q ss_pred             eEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         156 IVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       156 ~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                      .+.++..+...|-+.|+..|++....|.++++.+|.... ..+.++++.+.+
T Consensus        98 ~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~  148 (269)
T 4ecm_A           98 SFTYRVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFS-DDIRPYVEEFTN  148 (269)
T ss_dssp             EEEEEECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEES-SCSHHHHHHHHT
T ss_pred             eEEEeeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCc-cCHHHHHHHHHh
Confidence            566666566789999999998887789999999999765 678888888765

>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*

Probab=85.58  E-value=9  Score=35.89  Aligned_cols=75  Identities=17%  Similarity=0.178  Sum_probs=49.6

Q ss_pred             eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc--CcEEEEEcCCC-CCChhhHHHHHHH
Q psy7267         128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR--GSIILFADADG-ATKFADLEKLEDK  204 (569)
Q Consensus       128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~--gd~Vv~lDaD~-~~~pd~L~~lv~~  204 (569)
                      -+|+||-+..   ..++.+.+...+. .++.++.  ...|...++..|++...  .++++++|+|. .++++.+.++++.
T Consensus        49 ~~ivvv~~~~---~~~~~~~~~~~~~-~~v~~~~--~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~  122 (228)
T 2yc3_A           49 KEIVVVCDPF---FRDIFEEYEESID-VDLSFAI--PGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKD  122 (228)
T ss_dssp             EEEEEECCGG---GHHHHHTTTTTSS-SEEEEEC--CCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred             CeEEEEEChH---HHHHHHHHHHhCC-CcEEEEC--CCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHH
Confidence            3677775422   2233333333321 2455543  34688889999998765  48999999996 5688999999998


Q ss_pred             HHhc
Q psy7267         205 LKEL  208 (569)
Q Consensus       205 ~~~~  208 (569)
                      +.+.
T Consensus       123 ~~~~  126 (228)
T 2yc3_A          123 GSAV  126 (228)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            8763

>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*

Probab=85.24  E-value=10  Score=36.65  Aligned_cols=71  Identities=14%  Similarity=0.156  Sum_probs=43.0

Q ss_pred             eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC--CCCChHHHHHHHHHhc---cCcEEEEEcCCCC-CChhhHHHH
Q psy7267         128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL--KNRGKGGAVTLGTKCA---RGSIILFADADGA-TKFADLEKL  201 (569)
Q Consensus       128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~--~n~Gka~AlN~Gl~~A---~gd~Vv~lDaD~~-~~pd~L~~l  201 (569)
                      -+|+|+-+.  +.    ++++..++   ++.++..+  ...|.+ .+..+++..   ..|+++++++|.. ++++.+.++
T Consensus        43 ~~ivvv~~~--~~----i~~~~~~~---~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l  112 (262)
T 1vic_A           43 SRVIIATDN--EN----VADVAKSF---GAEVCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQV  112 (262)
T ss_dssp             SEEEEEESC--HH----HHHHHHHT---TCEEEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHH
T ss_pred             ceEEEECCc--HH----HHHHHHhc---CCEEEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHH
Confidence            378877652  32    23333332   35556543  223443 233344333   5699999999984 688999999


Q ss_pred             HHHHHhc
Q psy7267         202 EDKLKEL  208 (569)
Q Consensus       202 v~~~~~~  208 (569)
                      ++.+.+.
T Consensus       113 ~~~~~~~  119 (262)
T 1vic_A          113 ADNLAKF  119 (262)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9988763

>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}

Probab=84.10  E-value=5  Score=40.17  Aligned_cols=96  Identities=9%  Similarity=0.140  Sum_probs=59.8

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHh-hCCCeEEEEEcCCCCChHHHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK-CGEDIVRGLKLLKNRGKGGAVT  173 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~-~~~~~V~vi~~~~n~Gka~AlN  173 (569)
                      ++|+.+....|..+++.+.+.           --+|+||-+..   ..+.+++.... ++.+++.++..+...|-+.++.
T Consensus        30 ll~i~gg~pli~~~l~~l~~~-----------~~~i~vv~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~   95 (308)
T 2qh5_A           30 FLKLFDHKSLFELSFKRNASL-----------VDETLIVCNEK---HYFLALEEIKNEIKNKSVGFLLESLSKNTANAIA   95 (308)
T ss_dssp             GCTTBTTBCHHHHHHHHHHTT-----------CSEEEEEEEGG---GHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHH
T ss_pred             EEECCCCCCHHHHHHHHHHcc-----------CCCEEEEEChh---HHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHH
Confidence            445544445566666655443           12666664421   12233333222 2112566666667789999999


Q ss_pred             HHHHhcc-CcEEEEEcCCCCC-ChhhHHHHHHH
Q psy7267         174 LGTKCAR-GSIILFADADGAT-KFADLEKLEDK  204 (569)
Q Consensus       174 ~Gl~~A~-gd~Vv~lDaD~~~-~pd~L~~lv~~  204 (569)
                      .+..... .++++++.+|... +++.+.++++.
T Consensus        96 ~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~  128 (308)
T 2qh5_A           96 LSALMSDKEDLLIVTPSDHLIKDLQAYENAIKK  128 (308)
T ss_dssp             HHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred             HHHHHhCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence            9988775 4579999999987 78889998886

>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A

Probab=84.07  E-value=4.1  Score=38.66  Aligned_cols=73  Identities=15%  Similarity=0.179  Sum_probs=49.2

Q ss_pred             eEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhcc-CcEEEEEcCCCC-CChhhHHHHHHHH
Q psy7267         128 YEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCAR-GSIILFADADGA-TKFADLEKLEDKL  205 (569)
Q Consensus       128 ~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A~-gd~Vv~lDaD~~-~~pd~L~~lv~~~  205 (569)
                      -+|+||-+...+...+ +.+    ++...++++.  +..|...++..|++... .|.++++++|.. ++++.+.++++.+
T Consensus        52 ~~ivvv~~~~~~~~~~-~~~----~~~~~v~~~~--~~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~  124 (236)
T 1i52_A           52 KRVVIAISPGDSRFAQ-LPL----ANHPQITVVD--GGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALS  124 (236)
T ss_dssp             EEEEEEECTTCCSGGG-SGG----GGCTTEEEEE--CCSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGG
T ss_pred             CeEEEEeCccHHHHHH-HHh----cCCCCEEEEC--CCCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHH
Confidence            3777776544343322 222    2112566554  23588888999999884 799999999985 6888999998876


Q ss_pred             Hh
Q psy7267         206 KE  207 (569)
Q Consensus       206 ~~  207 (569)
                      .+
T Consensus       125 ~~  126 (236)
T 1i52_A          125 ET  126 (236)
T ss_dssp             GT
T ss_pred             Hh
Confidence            55

>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*

Probab=83.31  E-value=3.7  Score=38.43  Aligned_cols=49  Identities=12%  Similarity=0.061  Sum_probs=39.6

Q ss_pred             eEEEEEcC-CC-CChHHHHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHH
Q psy7267         156 IVRGLKLL-KN-RGKGGAVTLGTKCARGSIILFADADG-ATKFADLEKLEDK  204 (569)
Q Consensus       156 ~V~vi~~~-~n-~Gka~AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~  204 (569)
                      ++.++..+ .. .|...++..|++....|+++++++|. .++++.++++++.
T Consensus        65 ~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~  116 (201)
T 1e5k_A           65 GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ  116 (201)
T ss_dssp             SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred             CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh
Confidence            45556543 23 68899999999999899999999999 5788999998876

>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*

Probab=82.13  E-value=0.94  Score=45.88  Aligned_cols=109  Identities=15%  Similarity=0.062  Sum_probs=67.8

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHH-HHHHHhHhhCCCeEEEEEcCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQ-VVHQYTEKCGEDIVRGLKLLKNR  166 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~e-il~~~~~~~~~~~V~vi~~~~n~  166 (569)
                      ....+||||-+|+..+    .|..+++......     .--||+||=++..+...+ ....+... + ..|+++..+.|.
T Consensus        26 ~~~~FTvvi~ty~R~~----~L~~lv~~~~~~~-----~v~~IvVvWn~~~~~pp~~~~~~~~~~-~-vpv~v~~~~~ns   94 (293)
T 1omz_A           26 ALDSFTLIMQTYNRTD----LLLRLLNHYQAVP-----SLHKVIVVWNNVGEKGPEELWNSLGPH-P-IPVIFKPQTANK   94 (293)
T ss_dssp             CTTCEEEEEEESSCHH----HHHHHHHHHTTST-----TEEEEEEEECCTTCCCTHHHHHHTCCC-S-SCEEEEECSSCC
T ss_pred             CCCceEEEEEeecccH----HHHHHHHHHhcCC-----CCCeEEEEeCCCCCCCChhhccccCCC-C-ccEEEEeCCCCc
Confidence            3456999999999643    3444444333221     156999998876433332 23332111 1 358887765552


Q ss_pred             ChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhcc
Q psy7267         167 GKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELT  209 (569)
Q Consensus       167 Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~  209 (569)
                        -..+=.-....+.|.|+.+|.|..++.+.|+...+..++.+
T Consensus        95 --LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~P  135 (293)
T 1omz_A           95 --MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFP  135 (293)
T ss_dssp             --GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTST
T ss_pred             --hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCc
Confidence              11111222346789999999999999999999888888764

>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}

Probab=81.60  E-value=7.6  Score=36.74  Aligned_cols=69  Identities=17%  Similarity=0.158  Sum_probs=48.6

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC-CCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL-KNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLK  206 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~-~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~  206 (569)
                      +|+||-+.  +   +..+++.+.+   ++.++... ...|...++..|++.+ .|++ ++++|.. ++++.+.++++.+.
T Consensus        40 ~vvvv~~~--~---~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~  109 (208)
T 3ngw_A           40 QTVFVCRD--E---KQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGE  109 (208)
T ss_dssp             EEEEECSS--H---HHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHH
T ss_pred             CEEEEECC--H---HHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhh
Confidence            78888642  2   2333433322   34555432 3356779999999998 9999 9999985 58999999999887


Q ss_pred             h
Q psy7267         207 E  207 (569)
Q Consensus       207 ~  207 (569)
                      +
T Consensus       110 ~  110 (208)
T 3ngw_A          110 K  110 (208)
T ss_dssp             H
T ss_pred             c
Confidence            5

>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}

Probab=81.03  E-value=6.3  Score=36.56  Aligned_cols=49  Identities=18%  Similarity=0.200  Sum_probs=38.7

Q ss_pred             eEEEEEcCC-CCChHHHHHHHHHhccC-cEEEEEcCCC-CCChhhHHHHHHHH
Q psy7267         156 IVRGLKLLK-NRGKGGAVTLGTKCARG-SIILFADADG-ATKFADLEKLEDKL  205 (569)
Q Consensus       156 ~V~vi~~~~-n~Gka~AlN~Gl~~A~g-d~Vv~lDaD~-~~~pd~L~~lv~~~  205 (569)
                      ++ ++.++. ..|-+.++..|++.... |.++++++|. .++++.+.++++.+
T Consensus        61 ~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~  112 (197)
T 3d5n_A           61 QI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF  112 (197)
T ss_dssp             SC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC
T ss_pred             CE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh
Confidence            35 555443 36888999999998865 8999999999 46889999998876

>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}

Probab=80.86  E-value=0.85  Score=42.20  Aligned_cols=74  Identities=12%  Similarity=0.060  Sum_probs=46.6

Q ss_pred             EEEEEeCCCCccHHHHHHHHhHhhC-CCeEEEEEcCCCCChHHHHHHHHHhccCcEEEEEcCCCC-CChhhHHHHHHHHH
Q psy7267         129 EIIVVSDGSTDKTMQVVHQYTEKCG-EDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGA-TKFADLEKLEDKLK  206 (569)
Q Consensus       129 EIIVVDDgStD~T~eil~~~~~~~~-~~~V~vi~~~~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~-~~pd~L~~lv~~~~  206 (569)
                      +|+|+-+...+...+.+++   .++ ..++.++. ....|.+.++..|++.. .|.++++++|.. ++++.+.++++.+.
T Consensus        44 ~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~-~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~  118 (196)
T 3rsb_A           44 NIFIATSPNTPKTKEYINS---AYKDYKNIVVID-TSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFY  118 (196)
T ss_dssp             CEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHH
T ss_pred             EEEEEeCCChHHHHHHHHh---hccCCCCEEEEE-CCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence            7787765444444444433   121 12566665 34566667788888877 899999999984 68999999999987


Q ss_pred             h
Q psy7267         207 E  207 (569)
Q Consensus       207 ~  207 (569)
                      +
T Consensus       119 ~  119 (196)
T 3rsb_A          119 C  119 (196)
T ss_dssp             H
T ss_pred             h
Confidence            5

>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*

Probab=80.84  E-value=18  Score=33.44  Aligned_cols=87  Identities=14%  Similarity=0.043  Sum_probs=55.6

Q ss_pred             CCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChHHHHHHHHHhc-c
Q psy7267         102 QDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCA-R  180 (569)
Q Consensus       102 ~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka~AlN~Gl~~A-~  180 (569)
                      ...|..+++.+.+.    .  .   --+|+|+-+...   .+.++++.. .  .++.++..  ..+.+.++..|++.. .
T Consensus        30 ~pli~~~l~~l~~~----~--~---~~~i~vv~~~~~---~~~~~~~~~-~--~~v~~~~~--~~~~~~~i~~al~~~~~   92 (223)
T 2xwl_A           30 TPLLEHALSGLRAS----G--V---IDRIVIAVPPAL---TDESKLVFG-G--EDSVIVSG--GVDRTESVALALEAAGD   92 (223)
T ss_dssp             EEHHHHHHHHHHHH----S--C---CSEEEEEECGGG---HHHHHHHTC-B--TTEEEEEC--CSSHHHHHHHHHTTCTT
T ss_pred             eEHHHHHHHHHhcC----C--C---CCeEEEEEcccH---HHHHHHHhc-c--CCeEEEcC--CCCHHHHHHHHHHhcCC
Confidence            34555566655543    1  0   126777755321   222333321 1  35666653  345788899999888 7


Q ss_pred             CcEEEEEcCCC-CCChhhHHHHHHHH
Q psy7267         181 GSIILFADADG-ATKFADLEKLEDKL  205 (569)
Q Consensus       181 gd~Vv~lDaD~-~~~pd~L~~lv~~~  205 (569)
                      .|+++++++|. .++++.+.++++.+
T Consensus        93 ~~~vlv~~~D~P~~~~~~i~~l~~~~  118 (223)
T 2xwl_A           93 AEFVLVHDAARALTPPALIARVVAAL  118 (223)
T ss_dssp             CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred             CCEEEEEcCCcccCCHHHHHHHHHHH
Confidence            79999999998 46888999999988

>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*

Probab=80.42  E-value=3.9  Score=43.03  Aligned_cols=102  Identities=16%  Similarity=0.074  Sum_probs=60.4

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHh-Hhh----CCCeEEEEEcC---C--
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYT-EKC----GEDIVRGLKLL---K--  164 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~-~~~----~~~~V~vi~~~---~--  164 (569)
                      ++|+-+....|..+|+.+.+.    .      --+|+||-+...+...+.+.+.. ...    ....++++...   .  
T Consensus        45 llpi~g~~pli~~~l~~l~~~----g------~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~  114 (451)
T 1yp2_A           45 AVPLGANYRLIDIPVSNCLNS----N------ISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENP  114 (451)
T ss_dssp             GCEETTTEETTHHHHHHHHHT----T------CCEEEEEESCCCHHHHHHHHHHCC--------CCEEEEEESCSSTTSC
T ss_pred             eeEECCcceeHHHHHHHHHHC----C------CCEEEEEeccCHHHHHHHHhhhhhcccccccccCcEEEeccccccccc
Confidence            455555535677777766653    0      23777776644443333333210 000    01235565421   1  


Q ss_pred             --CCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHh
Q psy7267         165 --NRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKE  207 (569)
Q Consensus       165 --n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~  207 (569)
                        ..|-+.|+..++....   .+.++++.+|...+ ..+.++++.+.+
T Consensus       115 ~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~  161 (451)
T 1yp2_A          115 DWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRE  161 (451)
T ss_dssp             CCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHH
T ss_pred             ccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHH
Confidence              3688899999888765   58999999999554 458888887765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	569
d2bo4a1	381	c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG	3e-27
d1omza_	265	c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransf	1e-08
d1xhba2	328	c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa	9e-07
d1qg8a_	255	c.68.1.1 (A:) Spore coat polysaccharide biosynthes	1e-05

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

 Score =  111 bits (278), Expect = 3e-27
 Identities = 36/244 (14%), Positives = 66/244 (27%), Gaps = 41/244 (16%)

Query: 94  VIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCG 153
           V+ P  +E         E +          P   +E++ +          V     E   
Sbjct: 3   VVFPFKHEHP-------EVLLHNVRVAAAHPRV-HEVLCIGYERDQTYEAVERAAPEISR 54

Query: 154 ----------EDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFAD-LEKLE 202
                     ++ +  L+  K  G   A+    +  +   I F DAD  +   D + K E
Sbjct: 55  ATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAE 114

Query: 203 DKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWFTGV 262
           +          +                RA  +A   +     R         +   T +
Sbjct: 115 EAADF--GYGLV-----------RHYFPRASTDA--MITWMITRTGF----ALLWPHTEL 155

Query: 263 RTIRDTQCGFKLFTRKSALQLFSSIHVQ---RWAFDVELLFIAEVLHIPMAEVSVNWTEI 319
             I     G  L  R+ A  L+    V+    W  D    F+     + + E  +   + 
Sbjct: 156 SWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKA 215

Query: 320 EGSK 323
               
Sbjct: 216 HRLY 219

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Length = 265

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.3 bits (129), Expect = 1e-08
 Identities = 20/165 (12%), Positives = 44/165 (26%), Gaps = 12/165 (7%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
            ++I+  YN  D L  +L+                 +++IVV +   +K  + +      
Sbjct: 5   FTLIMQTYNRTDLLLRLLNHYQAV---------PSLHKVIVVWNNVGEKGPEELWNSLGP 55

Query: 152 CGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDG 211
               ++   +      K             + +L  D D      DL       ++  D 
Sbjct: 56  HPIPVIFKPQ---TANKMRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ 112

Query: 212 DYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFI 256
                       +  I                   ++++ G  F 
Sbjct: 113 IIGFVPRKHVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFF 157

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.8 bits (115), Expect = 9e-07
 Identities = 34/175 (19%), Positives = 63/175 (36%), Gaps = 14/175 (8%)

Query: 85  DDEPSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQV 144
           D+ P+   SV++  +NE       L  T+  +  R         EI++V D S    ++ 
Sbjct: 19  DNLPTT--SVVIVFHNEAWS---TLLRTVHSVINR--SPRHMIEEIVLVDDASERDFLKR 71

Query: 145 VHQYTEKCGEDIVRGLKLLKNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDK 204
             +   K  +  V  +++ +  G   A   G   +RG +I F DA        LE L  +
Sbjct: 72  PLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLAR 131

Query: 205 LKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRSFFRNILMKGFHFIVWF 259
           +K        + +        VI        A +++    F   L   ++ +   
Sbjct: 132 IK-------HDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQR 179

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Length = 255

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 8/61 (13%)

Query: 92  LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK 151
           +SVI+ +YN+ D +     ++I  +  +        +E+ ++ D S ++T+ V+  +   
Sbjct: 3   VSVIMTSYNKSDYVA----KSISSILSQTFS----DFELFIMDDNSNEETLNVIRPFLND 54

Query: 152 C 152
            
Sbjct: 55  N 55

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	569
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.95
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	99.9
d2bo4a1	381	Mannosylglycerate synthase, MGS {Rhodothermus mari	99.8
d1omza_	265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	99.76
d1fo8a_	343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	97.62
d1pzta_	271	beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos	97.58
d1v82a_	252	Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (	88.36
d1qwja_	228	CMP acylneuraminate synthetase {Mouse (Mus musculu	87.91
d1fxoa_	292	RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]}	83.64
d1g97a2	250	N-acetylglucosamine 1-phosphate uridyltransferase	81.22

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=2.4e-27  Score=241.86  Aligned_cols=203  Identities=17%  Similarity=0.078  Sum_probs=146.5

Q ss_pred             CCCccEEEEEeecCCC-CChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHH-HHHHHHhHhhCCCeEEEEEcCC
Q psy7267          87 EPSVNLSVIVPAYNEQ-DRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTM-QVVHQYTEKCGEDIVRGLKLLK  164 (569)
Q Consensus        87 ~~~p~VSVIIP~yNE~-~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~-eil~~~~~~~~~~~V~vi~~~~  164 (569)
                      ..+|.||||||+|||+ ..|.+||+|+++|      .||...+|||||||||+|+|. +.++++.++.+ .+++++++++
T Consensus        19 ~~~P~vSIIIp~yNe~~~~l~~~l~Si~~q------t~~~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~-~~i~vi~~~~   91 (328)
T d1xhba2          19 DNLPTTSVVIVFHNEAWSTLLRTVHSVINR------SPRHMIEEIVLVDDASERDFLKRPLESYVKKLK-VPVHVIRMEQ   91 (328)
T ss_dssp             SCCCCEEEEEEESSCCHHHHHHHHHHHHHS------SCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS-SCEEEEECSS
T ss_pred             CCCCCEEEEEeccCCcHHHHHHHHHHHHhc------CCCCCCeEEEEEECCCChhhHHHHHHHHHHhcC-CCeEEEEecc
Confidence            4578899999999997 5689999999987      556556899999999999975 56777766553 6799999999


Q ss_pred             CCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccch----
Q psy7267         165 NRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANV----  240 (569)
Q Consensus       165 n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~----  240 (569)
                      |.|.+.|+|.|+++|+||||+++|+|+.++|++|+++++.+++.+              ..++++...........    
T Consensus        92 n~G~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~--------------~~~v~~~~~~i~~~~~~~~~~  157 (328)
T d1xhba2          92 RSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDR--------------RTVVCPIIDVISDDTFEYMAG  157 (328)
T ss_dssp             CCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCT--------------TEEEEEEEEEECSSSCCEECC
T ss_pred             cccchHHHHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCC--------------CeEEecceeeeccCceeeccC
Confidence            999999999999999999999999999999999999999998853              23443332211111000    


Q ss_pred             --------hh-------HHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCch----hhchHHHHH
Q psy7267         241 --------QR-------SFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRW----AFDVELLFI  301 (569)
Q Consensus       241 --------~~-------~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~----~~D~EL~~R  301 (569)
                              ..       ........   ................+++.+++|++++++  +.+++.+    .+|+||++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~irr~~f~~v--GgfDe~~~~~g~ED~Dl~~R  232 (328)
T d1xhba2         158 SDMTYGGFNWKLNFRWYPVPQREMD---RRKGDRTLPVRTPTMAGGLFSIDRDYFQEI--GTYDAGMDIWGGENLEISFR  232 (328)
T ss_dssp             CTTEEEEECTTCCEEEEECCHHHHH---HTTTCTTSCEECSBCCSSSEEEEHHHHHHT--TSCCTTSCTTCCCCSHHHHH
T ss_pred             Cccccccccccccccccccchhhhh---ccccccccccccceecceeeeeeHHHHHHh--CCCCCCCcCcCchHHHHHHH
Confidence                    00       00000000   000000011112234456778999999999  6666544    379999999


Q ss_pred             HHHcCCCEEEEEEE
Q psy7267         302 AEVLHIPMAEVSVN  315 (569)
Q Consensus       302 a~~~G~rI~~vPv~  315 (569)
                      +.++|+++.++|..
T Consensus       233 ~~~~G~~i~~~p~~  246 (328)
T d1xhba2         233 IWQCGGTLEIVTCS  246 (328)
T ss_dssp             HHHTTCEEEEEEEE
T ss_pred             HHHhCCeEEEeCCe
Confidence            99999999999954

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.90  E-value=1.5e-23  Score=205.12  Aligned_cols=192  Identities=15%  Similarity=0.167  Sum_probs=138.0

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcC------
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLL------  163 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~------  163 (569)
                      |+||||||+||+++.|.++|+|+++|      +|+  ++||+||||||+|+|.++++++.++   .++++++.+      
T Consensus         1 P~vSiiip~yN~~~~l~~~l~Si~~Q------t~~--~~eiivvdd~S~d~t~~~l~~~~~~---~~i~~~~~~~~~~~~   69 (255)
T d1qg8a_           1 PKVSVIMTSYNKSDYVAKSISSILSQ------TFS--DFELFIMDDNSNEETLNVIRPFLND---NRVRFYQSDISGVKE   69 (255)
T ss_dssp             CCEEEEEEESSCTTTHHHHHHHHHTC------SCC--CEEEEEEECSCCHHHHHHHGGGGGS---TTEEEEECCCCSHHH
T ss_pred             CEEEEEEecCCCHHHHHHHHHHHHhC------CCC--CeEEEEEECCCCccHHHHHHHhhhh---ccccccccccccccc
Confidence            67999999999999999999999987      566  7999999999999999999998654   579988864      


Q ss_pred             --CCCChHHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchh
Q psy7267         164 --KNRGKGGAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQ  241 (569)
Q Consensus       164 --~n~Gka~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~  241 (569)
                        +|.|.++|+|.|++.|+||||+++|+|+.++|++|+++++.++++             +..+++.|.......+... 
T Consensus        70 ~~~~~g~~~a~N~gi~~a~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~-  135 (255)
T d1qg8a_          70 RTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTH-------------PEKAVIYSASKTYHLNENR-  135 (255)
T ss_dssp             HHSSCHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHC-------------TTCCEEEEEEEEEEEC----
T ss_pred             ccccchhcccccccccccccccccccccccccccchHHHHHHHHHhC-------------CCCCeEeecceeeeeCCCC-
Confidence              688999999999999999999999999999999999999999886             4556776544322211100 


Q ss_pred             hHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHh---ccccCCch----hhchHHHHHHHHcCCCEEEEE
Q psy7267         242 RSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLF---SSIHVQRW----AFDVELLFIAEVLHIPMAEVS  313 (569)
Q Consensus       242 ~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~---~~~~~e~~----~~D~EL~~Ra~~~G~rI~~vP  313 (569)
                           ................... ....+..+++|++++++.   .+..++..    .+|.|++.|+.+ ++++..++
T Consensus       136 -----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~~-~~~~~~i~  207 (255)
T d1qg8a_         136 -----DIVKETVRPAAQVTWNAPC-AIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FYPFYPLD  207 (255)
T ss_dssp             -----CEEEEEEECCCSCBSCCTT-TSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TCCBEEEE
T ss_pred             -----cEeeeecccchhhhhhhcc-cccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHHc-CCCEEEec
Confidence                 0000000000011111111 122234689999999982   22233322    349999999864 66777765

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

Probab=99.80  E-value=2.3e-19  Score=187.25  Aligned_cols=196  Identities=18%  Similarity=0.127  Sum_probs=132.4

Q ss_pred             EEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHh---hCCCeEEEEEc----CCC
Q psy7267          93 SVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEK---CGEDIVRGLKL----LKN  165 (569)
Q Consensus        93 SVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~---~~~~~V~vi~~----~~n  165 (569)
                      -||||+|||+..+   +..+.+...    .+|. ..||+|+||+|+|.|.++.+...+.   .+ ..+.....    ..+
T Consensus         2 lVVIP~~NEe~~i---l~~~v~~~a----~~P~-~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~-~~v~~~~~~~l~~~~   72 (381)
T d2bo4a1           2 LVVFPFKHEHPEV---LLHNVRVAA----AHPR-VHEVLCIGYERDQTYEAVERAAPEISRATG-TPVSVRLQERLGTLR   72 (381)
T ss_dssp             EEEEECCSSCHHH---HHHHHHHHH----HSTT-CCEEEEEESSCCHHHHHHHHHHHHHHHHHS-CCEEEEECCCCSSSS
T ss_pred             EEEEEcCCCcHHH---HHHHHHHHH----hCCC-eeEEEEEcCCCCCcHHHHHHHhhhhhcccc-ccchhhhhccccccc
Confidence            4899999999433   333333322    2342 3577777777777666665554332   11 22332221    224


Q ss_pred             CChHH----HHHHHHHhccCcEEEEEcCCC-CCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccch
Q psy7267         166 RGKGG----AVTLGTKCARGSIILFADADG-ATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANV  240 (569)
Q Consensus       166 ~Gka~----AlN~Gl~~A~gd~Vv~lDaD~-~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~  240 (569)
                      .||+.    |+..|++.++||+|+++|||. ..+|+++++++..++.               ++|+|.|.......++..
T Consensus        73 ~GKG~g~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i~~---------------g~d~V~g~y~R~~~~grv  137 (381)
T d2bo4a1          73 PGKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF---------------GYGLVRHYFPRASTDAMI  137 (381)
T ss_dssp             SSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT---------------TCSEEEEECCCCTTSCHH
T ss_pred             CCCcHHHHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHhh---------------hcCeEEEeeccccCCCce
Confidence            57765    566666889999999999997 5789999999999864               578998855433333333


Q ss_pred             hhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccc---cCCchhhchHHHHHHHHcCCCEEEEEEEE
Q psy7267         241 QRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSI---HVQRWAFDVELLFIAEVLHIPMAEVSVNW  316 (569)
Q Consensus       241 ~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~---~~e~~~~D~EL~~Ra~~~G~rI~~vPv~~  316 (569)
                      .+...+.++.    .+........+.++.||+++|+|+++++++...   ..++|++|++|+..+.+.|+||.++|+.+
T Consensus       138 t~~l~~pll~----~l~~~~~~~~i~dPl~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~  212 (381)
T d2bo4a1         138 TWMITRTGFA----LLWPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPE  212 (381)
T ss_dssp             HHHTHHHHHH----HHCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTT
T ss_pred             ehHhhHHHHH----HHhhhhcccccccCCcccceeeHHHHHHhhhhccccccCCcccchHHHHHHHHcCCeEEecCCCH
Confidence            3333343332    233344456788999999999999999985432   24789999999999999999999998644

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=3.2e-20  Score=175.39  Aligned_cols=107  Identities=15%  Similarity=0.094  Sum_probs=87.0

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCChH
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRGKG  169 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~Gka  169 (569)
                      -++|||||+||+++.|.+||+|+++|      +||  + |+|||||+|+|+|.+.+.+...+   ....++...+|.|++
T Consensus         3 ~~~tvii~tyn~~~~l~~~l~sl~~q------~~~--~-~~iiV~d~~sd~~~~~i~~~~~~---~~~~~~~~~~~~g~~   70 (265)
T d1omza_           3 DSFTLIMQTYNRTDLLLRLLNHYQAV------PSL--H-KVIVVWNNVGEKGPEELWNSLGP---HPIPVIFKPQTANKM   70 (265)
T ss_dssp             TCEEEEEEESSCHHHHHHHHHHHTTS------TTE--E-EEEEEECCTTCCCTHHHHHHTCC---CSSCEEEEECSSCCG
T ss_pred             CcEEEEEEcCCCHHHHHHHHHHHHcC------CCc--C-eEEEEECCCCCccHHHHHHHhcc---cceEEEEecCCCCch
Confidence            46999999999999999999999876      454  3 56677766766666655554333   233444457899999


Q ss_pred             HHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         170 GAVTLGTKCARGSIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       170 ~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      .|+|.|++.|+||||+++|+|+.++|++|+++++.++++
T Consensus        71 ~a~n~~~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~  109 (265)
T d1omza_          71 RNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQF  109 (265)
T ss_dssp             GGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred             hhhhhhHHhCCcCEEEEeCcccCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999885

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: N-acetylglucosaminyltransferase I
domain: N-acetylglucosaminyltransferase I
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.62  E-value=0.00026  Score=71.08  Aligned_cols=179  Identities=13%  Similarity=-0.001  Sum_probs=104.9

Q ss_pred             EEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCC-------
Q psy7267          92 LSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLK-------  164 (569)
Q Consensus        92 VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~-------  164 (569)
                      +-|+|-+||.+ .+.++|++|+++      .-.....+|+|..||+.+++.+.++++.+.     +..+....       
T Consensus         4 iPVlv~a~NRP-~l~r~LesLlk~------~p~~~~~~I~Vs~DG~~~~~~~~v~~~~~~-----v~~I~~~~~~~~~~~   71 (343)
T d1fo8a_           4 IPILVIACDRS-TVRRCLDKLLHY------RPSAELFPIIVSQDCGHEETAQVIASYGSA-----VTHIRQPDLSNIAVQ   71 (343)
T ss_dssp             CCEEEEESSCT-THHHHHHHHHHH------CSCTTTSCEEEEECTTCHHHHHHHHTTGGG-----SEEEECSCCCCCCCC
T ss_pred             ccEEEEEcCHH-HHHHHHHHHHhc------CccccCccEEEEecCCchhHHHHHHHHHHH-----HHHhcCCccccceec
Confidence            67899999997 699999999876      111235679999999999999988877543     33333221       


Q ss_pred             --------CCCh----HHHHHHHHHhccCcEEEEEcCCCCCChhhHHHHHH---HHHhccCCCccccccCCCCCceEEEe
Q psy7267         165 --------NRGK----GGAVTLGTKCARGSIILFADADGATKFADLEKLED---KLKELTDGDYIEDKNNAAGCNGVIVG  229 (569)
Q Consensus       165 --------n~Gk----a~AlN~Gl~~A~gd~Vv~lDaD~~~~pd~L~~lv~---~~~~~~~~~~~g~~~~~~~g~dvV~G  229 (569)
                              |.|.    ..|++..++.-..+.++++..|..+.||++.-+.+   .++++             +..-.|.|
T Consensus        72 ~~~~k~~~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D-------------~~i~~IS~  138 (343)
T d1fo8a_          72 PDHRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKAD-------------PSLWCVSA  138 (343)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHC-------------TTEEEEES
T ss_pred             chhhcccchhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcC-------------CCEEEEec
Confidence                    1222    23455555544579999999999999999865444   44443             34445554


Q ss_pred             eeeecccccchhhHHHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCCchhhchHHHHHHHHcCCCE
Q psy7267         230 SRAHLEALANVQRSFFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQRWAFDVELLFIAEVLHIPM  309 (569)
Q Consensus       230 ~r~~~~~~~~~~~~~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e~~~~D~EL~~Ra~~~G~rI  309 (569)
                      ....- .........            ...+.....  ..|--.|.+|+..+++-+.+....|  |..|.....+.| |.
T Consensus       139 wNdnG-~~~~~~~~~------------~~~lyrs~~--fpg~GW~~~r~~W~el~~kwp~~~W--d~w~r~~~~rkg-r~  200 (343)
T d1fo8a_         139 WNDNG-KEQMVDSSK------------PELLYRTDF--FPGLGWLLLAELWAELEPKWPKAFW--DDWMRRPEQRKG-RA  200 (343)
T ss_dssp             CCTTC-BGGGSCTTC------------TTCEEEESS--CCCSSEEEEHHHHHHHGGGCCSSCH--HHHHTSHHHHTT-CE
T ss_pred             cccCC-CcccccCCC------------CceEEeecC--CCchhhheeHHHHHHhhhcCCCCCc--HHhhhhHHhcCC-Ce
Confidence            33210 000000000            000011111  1233468999999999555554444  433443345544 56


Q ss_pred             EEEE
Q psy7267         310 AEVS  313 (569)
Q Consensus       310 ~~vP  313 (569)
                      +-.|
T Consensus       201 cI~P  204 (343)
T d1fo8a_         201 CVRP  204 (343)
T ss_dssp             EEEE
T ss_pred             eecc
Confidence            6666

>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: beta 1,4 galactosyltransferase (b4GalT1)
domain: beta 1,4 galactosyltransferase (b4GalT1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.58  E-value=0.00016  Score=70.56  Aligned_cols=150  Identities=14%  Similarity=0.084  Sum_probs=99.6

Q ss_pred             CCccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCCeEEEEEcCCCCC
Q psy7267          88 PSVNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGEDIVRGLKLLKNRG  167 (569)
Q Consensus        88 ~~p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~~V~vi~~~~n~G  167 (569)
                      +.-+++||||.+|.++.|...|..+...+..+..     +++|+||+...+                         ....
T Consensus        47 ~~~kvaIIIPyRdR~~hL~~fl~~l~~~L~~q~~-----~y~I~vieQ~~~-------------------------~~FN   96 (271)
T d1pzta_          47 SPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQL-----DYGIYVINQAGE-------------------------SMFN   96 (271)
T ss_dssp             CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC-----EEEEEEEEECSS-------------------------SCCC
T ss_pred             ccceEEEEEecCChHHHHHHHHHHHHHHHHhcCC-----CEEEEEEeccCC-------------------------cchh
Confidence            3467999999999999999999999888877654     789999987432                         2356


Q ss_pred             hHHHHHHHHHhcc----CcEEEEEcCCCCCChhhHHHHHHHHHhccCCCccccccCCCCCceEEEeeeeecccccchhhH
Q psy7267         168 KGGAVTLGTKCAR----GSIILFADADGATKFADLEKLEDKLKELTDGDYIEDKNNAAGCNGVIVGSRAHLEALANVQRS  243 (569)
Q Consensus       168 ka~AlN~Gl~~A~----gd~Vv~lDaD~~~~pd~L~~lv~~~~~~~~~~~~g~~~~~~~g~dvV~G~r~~~~~~~~~~~~  243 (569)
                      +|..+|.|+..|.    .+++++-|.|..+..+...      -..             .+...-.....       .   
T Consensus        97 Rg~llNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~------Y~~-------------~~~p~h~~~~~-------~---  147 (271)
T d1pzta_          97 RAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNT------YRC-------------FSQPRHISVAM-------D---  147 (271)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSC------CSC-------------CSSCEECCCEE-------G---
T ss_pred             hhhhhhHHHHHhhhccCccEEEEecCCcCccccccc------ccc-------------cccCcceeeec-------c---
Confidence            8889999998763    5789999999865433210      000             00000000000       0   


Q ss_pred             HHHHHhhhhhhhHhhhcccccccccccceeeEeHHHHHHHhccccCC---chh-hchHHHHHHHHcCCCEEEE
Q psy7267         244 FFRNILMKGFHFIVWFTGVRTIRDTQCGFKLFTRKSALQLFSSIHVQ---RWA-FDVELLFIAEVLHIPMAEV  312 (569)
Q Consensus       244 ~~r~~~~~~~~~l~~~~~~~~i~d~~~gf~lfrR~al~~I~~~~~~e---~~~-~D~EL~~Ra~~~G~rI~~v  312 (569)
                                    ............+|..+|+++-++++  +.+++   +|+ ||-||..|+..+|+++...
T Consensus       148 --------------~~~~~~~y~~~~GGv~~~~k~~f~kI--NGfsN~ywGWGgEDddl~~R~~~~g~~i~R~  204 (271)
T d1pzta_         148 --------------KFGFSLPYVQYFGGVSALSKQQFLSI--NGFPNNYWGAGGEDDDIYNRLAFRGMSVSRP  204 (271)
T ss_dssp             --------------GGTTSCSCTTCCCSEEEEEHHHHHHT--TSCCSCCCSSSSHHHHHHHHHHHTTCCCBCC
T ss_pred             --------------ccccccccccccceeeeecHHHHhhc--CCCCccccCCccccHHHHHHHHHcCCeEEcc
Confidence                          00001122344568889999999999  33332   343 6999999999999998764

>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.36  E-value=1.1  Score=41.92  Aligned_cols=98  Identities=19%  Similarity=0.260  Sum_probs=62.6

Q ss_pred             ccEEEEEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCC--CccHHHHHHHHhHhhCCCeEEEEEc--CC-
Q psy7267          90 VNLSVIVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGS--TDKTMQVVHQYTEKCGEDIVRGLKL--LK-  164 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgS--tD~T~eil~~~~~~~~~~~V~vi~~--~~-  164 (569)
                      |.|-||-|+|.......+ |..+...+...    |  ++.-|||+|+.  ++.|.+++++.       ++.+.+.  +. 
T Consensus         2 p~I~vVTPTy~R~~Q~~~-LtRLa~TL~lV----p--~l~WIVVEda~~~t~~va~lL~~s-------gl~y~HL~~~~p   67 (252)
T d1v82a_           2 PTIHVVTPTYSRPVQKAE-LTRMANTLLHV----P--NLHWLVVEDAPRRTPLTARLLRDT-------GLNYTHLHVETP   67 (252)
T ss_dssp             CEEEEEEEECCSTTHHHH-HHHHHHHHTTC----S--SEEEEEEESSSSCCHHHHHHHHHH-------CCEEEEEECCCC
T ss_pred             CCEEEECCCCCchhhHHH-HHHHHhHHhcC----C--CceEEEEeCCCCCCHHHHHHHHHc-------CCceEeeccCCC
Confidence            679999999999754433 45555544432    3  78999998754  56677887773       2333332  10 


Q ss_pred             ----------CC---ChHHHHHHHHHhcc---------CcEEEEEcCCCCCChhhHHHH
Q psy7267         165 ----------NR---GKGGAVTLGTKCAR---------GSIILFADADGATKFADLEKL  201 (569)
Q Consensus       165 ----------n~---Gka~AlN~Gl~~A~---------gd~Vv~lDaD~~~~pd~L~~l  201 (569)
                                +.   --...+|.|+++.+         .-+|.|.|.|...+.+.++++
T Consensus        68 ~~~~~~~~~~~~~~~rg~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdem  126 (252)
T d1v82a_          68 RNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEM  126 (252)
T ss_dssp             HHHHCCC-----CCCTTHHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHH
T ss_pred             cccccccccccccccccHHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHH
Confidence                      00   01357899998762         248889999998886655543

>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Cytidylytransferase
domain: CMP acylneuraminate synthetase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.91  E-value=5.1  Score=35.09  Aligned_cols=100  Identities=16%  Similarity=0.125  Sum_probs=63.1

Q ss_pred             ccEEEEEeecCCCCChH--------------HHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHhHhhCCC
Q psy7267          90 VNLSVIVPAYNEQDRLK--------------PMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYTEKCGED  155 (569)
Q Consensus        90 p~VSVIIP~yNE~~~I~--------------~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~~~~~~~  155 (569)
                      |+|..|||++-....++              .+++++.+.    ..     --+|+|..|  ++...++++.+       
T Consensus         2 ~ki~aiIpaR~~S~Rlp~K~l~~i~gkpLi~~~i~~~~ks----~~-----id~Iivstd--~~~i~~~~~~~-------   63 (228)
T d1qwja_           2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDA----GV-----FQSVWVSTD--HDEIENVAKQF-------   63 (228)
T ss_dssp             CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHH----TC-----CSEEEEEES--CHHHHHHHHHT-------
T ss_pred             CCEEEEeccCCCCCCCCCcchhhhCCeeHHHHHHHHHHhc----CC-----cceEEEecc--hhhhhhhhhhc-------
Confidence            67999999987776554              455555443    11     236666654  44455555543       


Q ss_pred             eEEEEEcCC-C----CChHHHHHHHHHhc-cCcEEEEEcCCCCC-ChhhHHHHHHHHHh
Q psy7267         156 IVRGLKLLK-N----RGKGGAVTLGTKCA-RGSIILFADADGAT-KFADLEKLEDKLKE  207 (569)
Q Consensus       156 ~V~vi~~~~-n----~Gka~AlN~Gl~~A-~gd~Vv~lDaD~~~-~pd~L~~lv~~~~~  207 (569)
                      ++.++.... .    .....++..+++.- ..++++++.+|+.+ .++.+.++++.+.+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~  122 (228)
T d1qwja_          64 GAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIRE  122 (228)
T ss_dssp             TCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHS
T ss_pred             CccccccccccccccchhhhhhhhccccccccceeeeecccccccCchhhhhhhhhhhc
Confidence            234444322 2    23445556666543 47999999999864 78999999999987

>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: glucose-1-phosphate thymidylyltransferase
domain: RmlA (RfbA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.64  E-value=1.2  Score=42.64  Aligned_cols=99  Identities=14%  Similarity=0.099  Sum_probs=66.7

Q ss_pred             EEeecCCCCChHHHHHHHHHHHHhhhccCCCCceEEEEEeCCCCccHHHHHHHHh---HhhCCCeEEEEEcCCCCChHHH
Q psy7267          95 IVPAYNEQDRLKPMLDETIEFLNERRKKIPTFKYEIIVVSDGSTDKTMQVVHQYT---EKCGEDIVRGLKLLKNRGKGGA  171 (569)
Q Consensus        95 IIP~yNE~~~I~~~L~sll~~l~~~~~~yp~~~~EIIVVDDgStD~T~eil~~~~---~~~~~~~V~vi~~~~n~Gka~A  171 (569)
                      ++|++|. ..|...|+.+..+          .--||++|-++...   +.++++.   .+++ -+++++..++..|-|.|
T Consensus        26 llpi~gk-PiI~~~l~~l~~~----------Gi~ei~ii~~~~~~---~~i~~~~~~~~~~g-~~I~y~~q~~~~Gta~a   90 (292)
T d1fxoa_          26 LLPVYDK-PMIYYPLSTLMLA----------GIREILIISTPQDT---PRFQQLLGDGSNWG-LDLQYAVQPSPDGLAQA   90 (292)
T ss_dssp             GSEETTE-ETTHHHHHHHHHT----------TCCEEEEEECTTTH---HHHHHHHTTSGGGT-CEEEEEECSSCCCGGGH
T ss_pred             cCEECCE-ehHHHHHHHHHHC----------CCCEEEEEeCcCCH---HHHHHHhccccccC-eEEEEccCCCCCcHHHH
Confidence            6788887 7788888877664          13388777665432   2333332   2222 46787777788999999


Q ss_pred             HHHHHHhccCc-EEEEEcCCCCCChhhHHHHHHHHHhcc
Q psy7267         172 VTLGTKCARGS-IILFADADGATKFADLEKLEDKLKELT  209 (569)
Q Consensus       172 lN~Gl~~A~gd-~Vv~lDaD~~~~pd~L~~lv~~~~~~~  209 (569)
                      +..+.+....| .++++.+|...+ ..+.++++...++.
T Consensus        91 i~~a~~~i~~~~~~lil~dD~~~~-~dl~~ll~~h~~~~  128 (292)
T d1fxoa_          91 FLIGESFIGNDLSALVLGDNLYYG-HDFHELLGSASQRQ  128 (292)
T ss_dssp             HHHTHHHHTTSEEEEEETTEEEEC-TTHHHHHHHHHTCC
T ss_pred             HHhhhhhcCCCceEEEEccccccC-cCHHHHHHHHHhCC
Confidence            99999988765 566665555444 45888888887753

>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=81.22  E-value=2.5  Score=37.34  Aligned_cols=53  Identities=17%  Similarity=0.107  Sum_probs=38.6

Q ss_pred             eEEEEEcCCCCChHHHHHHHHHhcc---CcEEEEEcCCCCCChhhHHHHHHHHHhc
Q psy7267         156 IVRGLKLLKNRGKGGAVTLGTKCAR---GSIILFADADGATKFADLEKLEDKLKEL  208 (569)
Q Consensus       156 ~V~vi~~~~n~Gka~AlN~Gl~~A~---gd~Vv~lDaD~~~~pd~L~~lv~~~~~~  208 (569)
                      .+.........|...++..+.....   .+.+++.+.|..+.++.++++++...+.
T Consensus        65 ~~~~~~~~~~~g~~~~~~~a~~~l~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~  120 (250)
T d1g97a2          65 QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINH  120 (250)
T ss_dssp             TSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHT
T ss_pred             cccccccccccccchHHHHHHHhhhcccCcceEEecCCCccCHHHHHHHHHHHhhh
Confidence            3445555667888888888766554   3566666777788999999999987764