Psyllid ID: psy7273

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
Protein Sequence
MTMSLYSSYTPDDFNTEEDIFECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIVPSVLTSRKRSLLHTSAPALSCSSELPCYKPSEYPPNTRTYSASSNSECDGDSGRGDSSICSDVKEEEPPPHLSPGTELQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccEEEEEEccccccccccccccccccccccEEEEEEEEEccccccEEEEEEccccccccccEEEEcccccEEEEEEEEEEcccccEEEEEEEEEEccEEEccccccccccccccEEEccccccEEEcccccccEEEEEEEcccccccccccccccccccEEEEEEEEEEEEccccccEEEEEEEEEEEEccccccccHHHHHHHHcccccccccEEEEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccEccccccHccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHcEEEEEEEEEccccccccccccccHHcccccccccccccccccccccccccccEEEcccccccccccccccccccccccHHHcHHHcccccEEEEEEEEEEEccccHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEEEcHHHHHHHccccEEEEEEHHHHHHcccEEEEEEEEEEccccccccccEEEEEEEEEEccccccccccccccccEcccccccEEEccccccEEEEEEEEEccccccccHHccccccccEEEEEEEEEEEEccccccEEEEEEEEEEEEccccccccHHHHHHHcccccccccccccEEEEEEEEEccccccc
Coil and Loop (DISEMBL)
mtmslyssytpddfnteedifECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIvpsvltsrkrsllhtsapalscsselpcykpseyppntrtysassnsecdgdsgrgdssicsdvkeeeppphlspgtelQFRITVLQAVGISTEYSDIFCQfnflhrhdeafstepvkntgkgtplgfyhiqnitvPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVheqvpeirwKDVKELVVGRirntpepemdedtdssVLSLGLfvgeyleipgedrsmfrfeaawdsslhnspllnrISAHGEQIFMTISAYLElencgqpgiitkdlslviygrdartaprtlkhlfsssyknneanrLTGVYEMALKRANEAGSP
Flexible Loop (DISEMBL)
mtmslyssytpddfnteEDIFECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVelkkktrsvmvtagevivpsvltsrkRSLLHTsapalscsselpcYKPSEYPPNTRTYSAssnsecdgdsgrGDSSICSDVKEEEPpphlspgtelQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTivheqvpeirwkdvkelVVGRIrntpepemdedtdssVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDARTaprtlkhlfsssyknneanrlTGVYEMALKRANEAGSP
Low Complexity Region (SEG)
MTMSLYSSYTPDDFNTEEDIFECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIVPSVLTSRKRSLLHTSAPALSCSSELPCYKPSEYPPNTRTYSASSNSECDGDSGRGDSSICSDVKEEEPPPHLSPGTELQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP
Disordered region (IsUnstruct)
*************FNTEEDIFECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIVPSVLTS***********************************************************************LQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIR**************VLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDARTAPRTLKHLFS***********TGVY*************
Disordered Region (DISOPRED)
*********************ECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIVPSVLTSRK******************************************************************GTELQFRITVLQAVGISTEYSDIFCQFNFLHRHDE*****************FYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRI********************LFVG*YLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDA******L***FSSSYKNNEANRLTGVYEMA***A******
Disordered Region (DISEMBL)
********YTPDDFNTEEDIFECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIVPSVLTSRKRSLLHTSAPALSCSSELPCYKPSEYPPNT************************************PGTELQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPE*********SVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP
Disordered Region (DISPRO)
**********P*DFNTEEDIFECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIVPSVLTSRKRSLLHTSAPALSCSSELPC*****YPPNTRTYS****************SICSDVKEEEPPPHLSPGTELQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRAN*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTMSLYSSYTPDDFNTEEDIFECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRSVMVTAGEVIVPSVLTSRKRSLLHTSAPALSCSSELPCYKPSEYPPNTRTYSASSNSECDGDSGRGDSSICSDVKEEEPPPHLSPGTELQFRITVLQAVGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFECRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
UNIPROTKB|Q7PHR1	1644	unc-104 "Kinesin-like protein	0.423	0.106	0.76	1.3e-144
UNIPROTKB|Q17BU3	1644	unc-104 "Kinesin-like protein	0.421	0.105	0.751	1.9e-142
UNIPROTKB|Q28WQ1	1671	unc-104 "Kinesin-like protein	0.423	0.104	0.737	1.1e-138
FB|FBgn0034155	1670	unc-104 "unc-104 ortholog" [Dr	0.423	0.104	0.754	1.7e-138
ZFIN|ZDB-GENE-030820-1	1782	kif1b "kinesin family member 1	0.418	0.097	0.539	1.7e-103
RGD|621520	1816	Kif1b "kinesin family member 1	0.418	0.095	0.544	3.2e-103
UNIPROTKB|O88658	1816	Kif1b "Kinesin-like protein KI	0.418	0.095	0.544	3.2e-103
UNIPROTKB|E1C889	1770	KIF1B "Uncharacterized protein	0.418	0.097	0.544	5.3e-103
UNIPROTKB|F1NXK6	1657	KIF1A "Uncharacterized protein	0.421	0.105	0.542	1.3e-102
ZFIN|ZDB-GENE-070912-480	1785	kif1ab "kinesin family member	0.421	0.097	0.531	1.5e-102

UNIPROTKB|Q7PHR1 unc-104 "Kinesin-like protein unc-104" [Anopheles gambiae (taxid:7165)]

 Score = 730 (262.0 bits), Expect = 1.3e-144, Sum P(3) = 1.3e-144
 Identities = 133/175 (76%), Positives = 157/175 (89%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             CRGLFLLHQGIQRRIR+TIVHE  PE++WKD++ELVVGRIRN PEP  DED+DS VLSLG
Sbjct:  1151 CRGLFLLHQGIQRRIRITIVHEPTPEVKWKDIRELVVGRIRNQPEPADDEDSDSCVLSLG 1210

Query:   299 LFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPG 358
             LF GE LE+PG+DRS FRFEAAWDSSLHNS LLNR++  GEQI++T+SAYLEL+NC +P 
Sbjct:  1211 LFPGEVLEVPGDDRSFFRFEAAWDSSLHNSALLNRVTQTGEQIYITLSAYLELDNCARPA 1270

Query:   359 IITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP 413
             IITKDLS++IYGRDART PR+LKHLFS  Y+N EANRL+GVYE++L+RA+EAGSP
Sbjct:  1271 IITKDLSMIIYGRDARTGPRSLKHLFSGQYRNPEANRLSGVYELSLRRASEAGSP 1325

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

UNIPROTKB|Q17BU3 unc-104 "Kinesin-like protein unc-104" [Aedes aegypti (taxid:7159)]

 Score = 711 (255.3 bits), Expect = 1.9e-142, Sum P(3) = 1.9e-142
 Identities = 133/177 (75%), Positives = 157/177 (88%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEP--EMDEDTDSSVLS 296
             CRGL+LLHQGIQRRIR+TIVHE   E++WKD++ELVVGRIRN PEP  E+D D+DS VLS
Sbjct:  1152 CRGLYLLHQGIQRRIRITIVHEPTAEVKWKDIRELVVGRIRNQPEPADELD-DSDSCVLS 1210

Query:   297 LGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQ 356
             LGLF GE LE+PG+DRS FRFEAAWDSSLHNS LLNR++  GEQIF+T+SAYLELENC +
Sbjct:  1211 LGLFPGEVLEVPGDDRSFFRFEAAWDSSLHNSALLNRVTQTGEQIFITLSAYLELENCAR 1270

Query:   357 PGIITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP 413
             P IITKDLS++IYGRDART PR+LKHLFS  Y+N EANRL+GVYE++L+RA+EAGSP
Sbjct:  1271 PAIITKDLSMIIYGRDARTGPRSLKHLFSGQYRNPEANRLSGVYELSLRRASEAGSP 1327

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

UNIPROTKB|Q28WQ1 unc-104 "Kinesin-like protein unc-104" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 709 (254.6 bits), Expect = 1.1e-138, Sum P(3) = 1.1e-138
 Identities = 129/175 (73%), Positives = 154/175 (88%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             CRGLFLLHQGIQRRIR+TIVHE  PE++WKD+ ELVVGRIRNTPE   ++D D+ VLSLG
Sbjct:  1144 CRGLFLLHQGIQRRIRITIVHEPTPEVKWKDINELVVGRIRNTPESSDEQDEDACVLSLG 1203

Query:   299 LFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPG 358
             LF GE L++PG+DRS +RFEAAWDSSLHNS LLNR+S  GE I++T+SAYLELENC +P 
Sbjct:  1204 LFPGEVLDVPGDDRSFYRFEAAWDSSLHNSALLNRVSQGGETIYITLSAYLELENCARPA 1263

Query:   359 IITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP 413
             I+TKDLS+VIYGRDART PR+LKHLFS  Y+N EANRL+GVYE++L+RA+EAGSP
Sbjct:  1264 IVTKDLSMVIYGRDARTGPRSLKHLFSGQYRNPEANRLSGVYELSLRRASEAGSP 1318

GO:0003674 "molecular_function" evidence=ND

GO:0005875 "microtubule associated complex" evidence=ISS

GO:0047496 "vesicle transport along microtubule" evidence=ISS

GO:0048489 "synaptic vesicle transport" evidence=ISS

FB|FBgn0034155 unc-104 "unc-104 ortholog" [Drosophila melanogaster (taxid:7227)]

 Score = 711 (255.3 bits), Expect = 1.7e-138, Sum P(3) = 1.7e-138
 Identities = 132/175 (75%), Positives = 153/175 (87%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             CRGLFLLHQGIQRRIR+TIVHE   E++WKD+ ELVVGRIRNTPE   ++D D+ VLSLG
Sbjct:  1144 CRGLFLLHQGIQRRIRITIVHEPTTEVKWKDINELVVGRIRNTPESSDEQDEDACVLSLG 1203

Query:   299 LFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPG 358
             LF GE LE+PG+DRS +RFEAAWDSSLHNS LLNR+S  GE I++T+SAYLELENC +P 
Sbjct:  1204 LFPGEALEVPGDDRSFYRFEAAWDSSLHNSALLNRVSQGGETIYITLSAYLELENCARPA 1263

Query:   359 IITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAGSP 413
             IITKDLS+VIYGRDART PR+LKHLFS  Y+N EANRLTGVYE+AL+RA+EAGSP
Sbjct:  1264 IITKDLSMVIYGRDARTGPRSLKHLFSGQYRNPEANRLTGVYELALRRASEAGSP 1318

GO:0003777 "microtubule motor activity" evidence=ISS

GO:0005871 "kinesin complex" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IMP

GO:0048489 "synaptic vesicle transport" evidence=IMP

GO:0016188 "synaptic vesicle maturation" evidence=IMP

GO:0047496 "vesicle transport along microtubule" evidence=IMP

GO:0016192 "vesicle-mediated transport" evidence=IMP

GO:0007528 "neuromuscular junction development" evidence=IMP

GO:0008345 "larval locomotory behavior" evidence=IMP

GO:0048490 "anterograde synaptic vesicle transport" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

ZFIN|ZDB-GENE-030820-1 kif1b "kinesin family member 1B" [Danio rerio (taxid:7955)]

 Score = 500 (181.1 bits), Expect = 1.7e-103, Sum P(3) = 1.7e-103
 Identities = 96/178 (53%), Positives = 134/178 (75%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             C G +LLHQGIQRRI +T++HE+  E+ WKDV+ELVVGRIRN  +PE+D+    +VLSL 
Sbjct:  1244 CHGTYLLHQGIQRRITVTLIHEKGSELHWKDVRELVVGRIRN--KPEVDDSAADAVLSLN 1301

Query:   299 LFVGEYLEIP-GEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQP 357
             +   + L+      R+ +RFEA WDSSLHNS LLNR++ +GE+I+MT+SAYLEL++C QP
Sbjct:  1302 IISAKNLKSSHNSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQP 1361

Query:   358 GIITKDLSLVIYGRDARTAP-RTLKHLFSSSY-KNNEANRLTGVYEMALKRANEAGSP 413
              IITKD+ +V Y RDA+ +P R+L++LF S Y K  + N++TGVYE++L +  + GSP
Sbjct:  1362 AIITKDICMVFYSRDAKISPPRSLRNLFGSGYSKTPDCNKVTGVYELSLCKIADTGSP 1419

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0048918 "posterior lateral line nerve development" evidence=IMP

GO:0048917 "posterior lateral line ganglion development" evidence=IMP

GO:0008298 "intracellular mRNA localization" evidence=IMP

GO:0048675 "axon extension" evidence=IMP

RGD|621520 Kif1b "kinesin family member 1B" [Rattus norvegicus (taxid:10116)]

 Score = 507 (183.5 bits), Expect = 3.2e-103, Sum P(4) = 3.2e-103
 Identities = 97/178 (54%), Positives = 137/178 (76%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             C+G FLLHQGIQRRI +TI+HE+  E+ WKDV+ELVVGRIRN  +PE+DE    ++LSL 
Sbjct:  1280 CQGTFLLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRN--KPEVDEAAVDAILSLN 1337

Query:   299 LFVGEYLEIP-GEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQP 357
             +   + L+      R+ +RFEA WDSSLHNS LLNR++ +GE+I+MT+SAYLEL++C QP
Sbjct:  1338 IISAKSLKSSHSSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQP 1397

Query:   358 GIITKDLSLVIYGRDARTAP-RTLKHLFSSSY-KNNEANRLTGVYEMALKRANEAGSP 413
              +ITKD+ +V Y RDA+ +P R+L++LF S Y K+ ++NR+TG+YE++L +  + GSP
Sbjct:  1398 AVITKDVCMVFYSRDAKISPPRSLRNLFGSGYSKSPDSNRVTGIYELSLCKMADTGSP 1455

GO:0003777 "microtubule motor activity" evidence=ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005874 "microtubule" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=ISO;ISS

GO:0006200 "ATP catabolic process" evidence=ISO

GO:0007018 "microtubule-based movement" evidence=ISO;ISS

GO:0007270 "neuron-neuron synaptic transmission" evidence=ISO;ISS

GO:0007274 "neuromuscular synaptic transmission" evidence=ISO;ISS

GO:0008089 "anterograde axon cargo transport" evidence=ISO;ISS

GO:0008152 "metabolic process" evidence=ISO

GO:0016887 "ATPase activity" evidence=ISO;ISS

GO:0030659 "cytoplasmic vesicle membrane" evidence=ISO;ISS

GO:0030705 "cytoskeleton-dependent intracellular transport" evidence=ISO;ISS

GO:0031410 "cytoplasmic vesicle" evidence=IDA

GO:0043005 "neuron projection" evidence=IDA

GO:0047497 "mitochondrion transport along microtubule" evidence=IEA;ISO

UNIPROTKB|O88658 Kif1b "Kinesin-like protein KIF1B" [Rattus norvegicus (taxid:10116)]

 Score = 507 (183.5 bits), Expect = 3.2e-103, Sum P(4) = 3.2e-103
 Identities = 97/178 (54%), Positives = 137/178 (76%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             C+G FLLHQGIQRRI +TI+HE+  E+ WKDV+ELVVGRIRN  +PE+DE    ++LSL 
Sbjct:  1280 CQGTFLLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRN--KPEVDEAAVDAILSLN 1337

Query:   299 LFVGEYLEIP-GEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQP 357
             +   + L+      R+ +RFEA WDSSLHNS LLNR++ +GE+I+MT+SAYLEL++C QP
Sbjct:  1338 IISAKSLKSSHSSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQP 1397

Query:   358 GIITKDLSLVIYGRDARTAP-RTLKHLFSSSY-KNNEANRLTGVYEMALKRANEAGSP 413
              +ITKD+ +V Y RDA+ +P R+L++LF S Y K+ ++NR+TG+YE++L +  + GSP
Sbjct:  1398 AVITKDVCMVFYSRDAKISPPRSLRNLFGSGYSKSPDSNRVTGIYELSLCKMADTGSP 1455

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E1C889 KIF1B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 508 (183.9 bits), Expect = 5.3e-103, Sum P(3) = 5.3e-103
 Identities = 97/178 (54%), Positives = 138/178 (77%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             C+G FLLHQGIQRRI +TI+HE+  E+ WKDV+ELVVGRIRN  + E+DE    ++LSL 
Sbjct:  1234 CQGTFLLHQGIQRRITVTIIHEKGNELHWKDVRELVVGRIRN--KAEVDEAAVDAILSLN 1291

Query:   299 LFVGEYLEIP-GEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQP 357
             +   +YL+     +R+ +RFEA WDSSLHNS LLNR++ +GE+I+MT+SAYLEL++C QP
Sbjct:  1292 IISAKYLKSSHSSNRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQP 1351

Query:   358 GIITKDLSLVIYGRDARTAP-RTLKHLFSSSY-KNNEANRLTGVYEMALKRANEAGSP 413
              +ITKD+ +V Y RDA+ +P R+L++LF S Y K+ ++NR+TG+YE++L +  + GSP
Sbjct:  1352 AVITKDVCMVFYSRDAKISPPRSLRNLFGSGYSKSPDSNRVTGIYELSLCKMADTGSP 1409

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007270 "neuron-neuron synaptic transmission" evidence=IEA

GO:0007274 "neuromuscular synaptic transmission" evidence=IEA

GO:0008089 "anterograde axon cargo transport" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0047497 "mitochondrion transport along microtubule" evidence=IEA

UNIPROTKB|F1NXK6 KIF1A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 502 (181.8 bits), Expect = 1.3e-102, Sum P(3) = 1.3e-102
 Identities = 96/177 (54%), Positives = 134/177 (75%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             C G FLLHQGIQRRI +T+VHE    IRWK+V+ELVVGRIRNTPE + +   D ++LSL 
Sbjct:  1127 CHGTFLLHQGIQRRITVTLVHETGSLIRWKEVRELVVGRIRNTPEAD-ESLIDPNILSLN 1185

Query:   299 LFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPG 358
             +    Y+    +DR+ ++FE AWDSS+HNS LLNR++ + E+I++T+SAY+E+ENC QP 
Sbjct:  1186 ILSSGYIHPSQDDRTFYQFETAWDSSMHNSLLLNRVTPYREKIYITLSAYIEMENCTQPA 1245

Query:   359 IITKDLSLVIYGRDART-APRTLKHLFSS-SYKNNEANRLTGVYEMALKRANEAGSP 413
             +ITKD  +V Y RDA+  A R++++LF S S + +E+NR+TGVYE++L R  +AGSP
Sbjct:  1246 VITKDFCMVFYSRDAKLPASRSIRNLFGSGSLRASESNRVTGVYELSLCRVADAGSP 1302

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-070912-480 kif1ab "kinesin family member 1Ab" [Danio rerio (taxid:7955)]

 Score = 496 (179.7 bits), Expect = 1.5e-102, Sum P(3) = 1.5e-102
 Identities = 94/177 (53%), Positives = 133/177 (75%)

Query:   239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLG 298
             C G FLLHQGIQRRI +TI HE   +I WK+VKELV+GRIRNTPE + +   D ++LSL 
Sbjct:  1281 CHGTFLLHQGIQRRITVTIAHETGNDIEWKEVKELVIGRIRNTPEAD-ETIIDPNILSLN 1339

Query:   299 LFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPG 358
             +    Y+    +DR+ +RFEAAWDSS+HNS LLNR++ +GE+I++T+SAYLE+ENC QP 
Sbjct:  1340 ILSSNYIRPTYDDRTFYRFEAAWDSSMHNSLLLNRVTPYGEKIYITLSAYLEMENCTQPT 1399

Query:   359 IITKDLSLVIYGRDART-APRTLKHLFSS-SYKNNEANRLTGVYEMALKRANEAGSP 413
             ++TKD  +V Y RDA+  A R++++LFS+ +++  E+N +TGVYE++L    + GSP
Sbjct:  1400 VVTKDFCMVFYSRDAKLPASRSIRNLFSTGAFRPLESNCVTGVYELSLCHLADIGSP 1456

GO:0005524 "ATP binding" evidence=IEA

GO:0005875 "microtubule associated complex" evidence=IEA

GO:0003777 "microtubule motor activity" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	413
pfam12473	142	pfam12473, DUF3694, Kinesin protein	3e-40

>gnl|CDD|221593 pfam12473, DUF3694, Kinesin protein

 Score =  139 bits (353), Expect = 3e-40
 Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 7/134 (5%)

Query: 241 GLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLGLF 300
           G F L QG+QRRI +T+  E   ++ W+D+  LVVG +R   +   D      VLSL L 
Sbjct: 16  GTFKLRQGLQRRIVVTLKQESGEQLPWEDITRLVVGLVRKAGKQP-DMGLVDPVLSLKLL 74

Query: 301 VGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGII 360
            G     P +  +    EA WDSSLHNS LLNR++   E++++T++  + L  C +P   
Sbjct: 75  SG-----PDDGTN-VVIEAQWDSSLHNSLLLNRVTPKKERVYLTLAVDVVLSKCAEPVRF 128

Query: 361 TKDLSLVIYGRDAR 374
           +KDL + IY R  R
Sbjct: 129 SKDLCVQIYSRSER 142

This domain family is found in eukaryotes, and is typically between 131 and 151 amino acids in length. The family is found in association with pfam00225, pfam00498. There is a single completely conserved residue W that may be functionally important. Length = 142

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	413
KOG0241|consensus	1714		100.0
KOG0245|consensus	1221		100.0
PF12473	140	DUF3694: Kinesin protein ; InterPro: IPR022164 Thi	100.0
PF11618	107	DUF3250: Protein of unknown function (DUF3250); In	87.56
PF12423	45	KIF1B: Kinesin protein 1B; InterPro: IPR022140 Thi	86.35
PF00168	85	C2: C2 domain; InterPro: IPR000008 The C2 domain i	84.44

>KOG0241|consensus

Probab=100.00  E-value=1.8e-70  Score=583.07  Aligned_cols=369  Identities=21%  Similarity=0.341  Sum_probs=291.1

Q ss_pred             cCCCcHHHHHHHHHHHHhcccccccchHHHHHhhcccHHHHHHHHHHhcccccE-EEEecCC--cc---------c-cee
Q psy7273          22 ECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRS-VMVTAGE--VI---------V-PSV   88 (413)
Q Consensus        22 ~~~wt~~e~~lar~~~~kWk~~~~~sLrE~l~~na~lvKEAN~IS~EL~K~VqF-vll~~p~--L~---------~-P~i   88 (413)
                      ...|.+++.+++|.++.        +|||||++++.||+|||+||+||+|++.| |+|++|+  |.         + |+|
T Consensus       643 ~~~WAeerdemf~~SL~--------rLr~~iv~AN~LVrEAN~laeEm~KkT~y~VTLQIPaanL~~nrkrGa~vsEPaI  714 (1714)
T KOG0241|consen  643 VTQWAEERDEMFRQSLA--------RLREQIVKANTLVREANFLAEEMSKKTDYQVTLQIPAANLSANRKRGAFVSEPAI  714 (1714)
T ss_pred             HHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHhhccceeEEEEcchhcCCcccccCceecccee
Confidence            34799999999999999        59999999999999999999999999999 9999975  22         2 887


Q ss_pred             -EE----------Eec--------cchhhhcccCCCCC-CCCCCCCCCCC-----CC--cceee----------------
Q psy7273          89 -LT----------SRK--------RSLLHTSAPALSCS-SELPCYKPSEY-----PP--NTRTY----------------  125 (413)
Q Consensus        89 -Vr----------lrq--------RemY~~~~~~~p~~-~~~f~~e~p~y-----~~--Gv~~~----------------  125 (413)
                       ||          ++|        |+|||.|++++|+. ..+++.-||+|     +.  ||||.                
T Consensus       715 ~VrR~g~gsQiWt~ekLenkLiDMRd~Yqe~ke~~~~~~~~~~k~~DPFyesQEnhnLiGVANvFLE~LF~DvkL~Y~vP  794 (1714)
T KOG0241|consen  715 QVRRKGKGSQIWTIEKLENKLIDMRDLYQEWKEKVPPAKRLYGKRGDPFYESQENHNLIGVANVFLEVLFHDVKLQYAVP  794 (1714)
T ss_pred             EEEecCCCceeeeHHHhHhHHhhHHHHHHHHHhcCCchhhhccccCCccccccccccchhhHHHHHHHHHhhheeccccc
Confidence             76          222        99999999977764 33344445555     33  99952                


Q ss_pred             eecCCeeee------CCCCCCCC---CccCCCCCCCCCCCCCCCCeEEEEEEEEeecCCCCCCCe-eEEEeeeCCCcccc
Q psy7273         126 SASSNSECD------GDSGRGDS---SICSDVKEEEPPPHLSPGTELQFRITVLQAVGISTEYSD-IFCQFNFLHRHDEA  195 (413)
Q Consensus       126 ~~~~~Gev~------v~~~~~~~---~~~~~~~~~~~p~~l~~g~~ltf~V~I~~a~Glp~~~s~-VfcQy~f~~~~e~~  195 (413)
                      +|+|+|||+      +-...|+-   ....++-.+...+..+.+++|||||+|++|+|||..+|+ |||||+||++.|.+
T Consensus       795 IIsQqGEVAGRLhVev~Rv~gq~~~~~~ggdev~e~~~~~~~~~~~ltCrVkIk~AtGLP~~LSnFVFCqYtFw~~~E~~  874 (1714)
T KOG0241|consen  795 IISQQGEVAGRLHVEVMRVTGQVPERVVGGDEVVESSGEIIHRVKKLTCRVKIKEATGLPLNLSNFVFCQYTFWDQQEST  874 (1714)
T ss_pred             eecccccccceeEEEEEEeccccchhhccccccccCCCccccccceEEEEEEEeeccCCcccccceEEEEeeecccccce
Confidence            799999994      11111110   111111112223345778999999999999999999999 99999999999976


Q ss_pred             eecCccc----CCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEEEe---------------------------------
Q psy7273         196 FSTEPVK----NTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFE---------------------------------  238 (413)
Q Consensus       196 ~st~p~~----~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~iE---------------------------------  238 (413)
                      ...+.++    +.....++.|+||++|+|+|||+|+||+++|+|+||                                 
T Consensus       875 vvaP~vd~ss~~~~~~~~v~FeH~~df~V~vtEeFlE~~~dgALaIEVwGHr~~g~~~~iwe~d~~qaKtrsL~dRW~Ev  954 (1714)
T KOG0241|consen  875 VVAPVVDPSSQSKDAQYTVIFEHCKDFVVNVTEEFLEHISDGALAIEVWGHRIAGNGSSIWEVDSLQAKTRSLHDRWNEV  954 (1714)
T ss_pred             eeeeccccccccCCCCeEEEeecccceEEeehHHHHHHhhcCceEEEEeeccccCCCcccccchhhhhhhhHHHHHHHHH
Confidence            5432222    344578999999999999999999999999999999                                 


Q ss_pred             -------------------------------eceEEEEecCceeeEEE--EEEeccCC-ceeeeeeeEEEecee--e---
Q psy7273         239 -------------------------------CRGLFLLHQGIQRRIRL--TIVHEQVP-EIRWKDVKELVVGRI--R---  279 (413)
Q Consensus       239 -------------------------------~~G~FqLhQGlQRRI~V--tl~h~sG~-~L~w~~i~~l~vG~v--R---  279 (413)
                                                     +||+||||||+|||++|  +++|.||+ ||..+.|.+|.||||  |   
T Consensus       955 tRriE~Wvei~ElNenGey~~VEv~~a~dV~TGGI~QLrQGq~RRv~V~Vk~vq~sGtLPl~~e~I~sVsIG~v~~r~tr 1034 (1714)
T KOG0241|consen  955 TRRIEMWVEILELNENGEYAPVEVHQAKDVNTGGIFQLRQGQSRRVQVTVKPVQHSGTLPLMVECILSVSIGCVTARSTR 1034 (1714)
T ss_pred             HHHHHHHHHHHHhccCCCcceeEEeecccccccceeEeccCceeEEEEEEeeccCCCccceehhhhheeeeeeEEeeecc
Confidence                                           99999999999999998  77999998 999999999999999  3   


Q ss_pred             c---------------------------------------CCCCCCCC-CCCcce----EEe----------------cc
Q psy7273         280 N---------------------------------------TPEPEMDE-DTDSSV----LSL----------------GL  299 (413)
Q Consensus       280 ~---------------------------------------~~~~~~~~-~~~~~~----l~L----------------~~  299 (413)
                      +                                       +.++.+++ +++.++    |.|                |+
T Consensus      1035 ~~r~~dsyqeeDL~~lR~kWs~AL~kR~~YLdqQiq~l~~K~~KtE~d~eRE~~L~~qwv~LTEERnAV~vPapgSgIPG 1114 (1714)
T KOG0241|consen 1035 LQRGLDSYQEEDLNCLREKWSDALIKRREYLDQQIQKLSNKTEKTEDDVEREAQLVEQWVGLTEERNAVLVPAPGSGIPG 1114 (1714)
T ss_pred             CcCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhhhhhhcceeeccCCCCCCCC
Confidence            1                                       23444443 555533    333                77


Q ss_pred             cCCCceecCC--------------CC------------------------------------CeEEEEEEEecCCCCCcc
Q psy7273         300 FVGEYLEIPG--------------ED------------------------------------RSMFRFEAAWDSSLHNSP  329 (413)
Q Consensus       300 ~~~~~~~~~~--------------d~------------------------------------~~~~~~~a~WDSS~H~s~  329 (413)
                      +|+.|++++|              ||                                    .+.+.++|+||||+|+|+
T Consensus      1115 APadW~pp~GmE~HiPVlFLdLN~DD~s~q~t~dep~~aG~~s~L~~E~~~~f~~l~I~k~~D~ev~a~aSWDSsvHd~~ 1194 (1714)
T KOG0241|consen 1115 APADWIPPPGMETHIPVLFLDLNADDLSAQETLDEPHAAGVNSILPKEHGSQFFYLPIIKHSDKEVSATASWDSSVHDSP 1194 (1714)
T ss_pred             CCccccCCCCCcccCceEEEecCCCccccccccCCcccccccccccCCcCCceEEEEeEeccCCceeEEeeccccccCch
Confidence            7888988887              22                                    344679999999999999


Q ss_pred             ccccccCCCCEEEEEEEEEEEecC-cCcceEEEEeeeEEEeccCCcCcchhhhhhhccccccccccceeeEEEEE
Q psy7273         330 LLNRISAHGEQIFMTISAYLELEN-CGQPGIITKDLSLVIYGRDARTAPRTLKHLFSSSYKNNEANRLTGVYEMA  403 (413)
Q Consensus       330 lLNRvT~~~~rV~~tl~~~v~~~~-~~~Pv~f~kdi~v~I~~R~~~~~~~~~~~l~~~~~r~~~~~~~sgvf~v~  403 (413)
                      .|||+|+.++|||++|+.+|+++| |+|.++++|+||++||+++++ +.++++. .+| .-+  +.++.-.|+|.
T Consensus      1195 aLnr~T~~neRvylIvk~tV~LSHPa~M~lVLRKRi~~ni~~kqs~-t~~l~kk-m~~-~~~--i~~~gvtyeiV 1264 (1714)
T KOG0241|consen 1195 ALNRVTPQNERVYLIVKTTVQLSHPAPMELVLRKRICANIYKKQSF-TQSLKKK-MSG-KNI--IYSCGVTYEIV 1264 (1714)
T ss_pred             hhcCCCCCCceEEEEEEEEeeecCCCcHHHHHHHHHhhhhhcCccH-HHHHHHH-hcc-ccc--ccccceEEehh
Confidence            999999999999999999999999 999999999999999999999 4565555 443 333  44555666664

>KOG0245|consensus

Probab=100.00  E-value=4.4e-52  Score=448.63  Aligned_cols=379  Identities=44%  Similarity=0.672  Sum_probs=318.3

Q ss_pred             cCCCcHHHHHHHHHHHHhcccccccchHHHHHhhcccHHHHHHHHHHhcccccE--EEEec-------CCccccee----
Q psy7273          22 ECTWTEREFALAAWAFRKWKYHQFTSLRDDLWGNAIFLKEANAISVELKKKTRS--VMVTA-------GEVIVPSV----   88 (413)
Q Consensus        22 ~~~wt~~e~~lar~~~~kWk~~~~~sLrE~l~~na~lvKEAN~IS~EL~K~VqF--vll~~-------p~L~~P~i----   88 (413)
                      +++||.++.+|+.|+++|||+|+|+++||++|++++++++||+|+.|++|+|+|  +++++       ++|+ |.+    
T Consensus       651 ~~~~~~~~~~~~~~~~~k~k~~~~~s~~~~~~~~~~~l~~~~a~~~e~~k~v~~e~al~td~q~~~~~~ell-~t~i~~~  729 (1221)
T KOG0245|consen  651 EVQWTVKECELALWAKRKAKRHQEQSLRDLLEGNAIFLAAAAALEVELKKKVRFEEALLTDTQKSMKEEELL-PTEILVN  729 (1221)
T ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhccchhhhhhhcccccccccccccc-chhhhhh
Confidence            789999999999999999999999999999999999999999999999999988  88876       3444 522    


Q ss_pred             EE-----------Eec----cchhhhcccCCCC-CCCCCC----CCCCCCCC-------c-ce-----ee---------e
Q psy7273          89 LT-----------SRK----RSLLHTSAPALSC-SSELPC----YKPSEYPP-------N-TR-----TY---------S  126 (413)
Q Consensus        89 Vr-----------lrq----RemY~~~~~~~p~-~~~~f~----~e~p~y~~-------G-v~-----~~---------~  126 (413)
                      |+           ..+    |+||....+ ++. +...+.    -.+|+|..       | +.     .|         +
T Consensus       730 v~d~~~~~t~~w~~ekl~~~R~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~l~~l~~~~~l~~~~~~  808 (1221)
T KOG0245|consen  730 VSDKSDGATHLWSKEKLDMIRELGEQEAE-MATSDGDESEDIATGSDPFYERRHWFKLLGILVRLSSLAYPVPLIAKKAI  808 (1221)
T ss_pred             ccccccchHHHHHHHHHHHHHHhchhhhh-hcccCCCccccccccCCccccchhHHHHHHHHHHHHhcccchhHHHhhhh
Confidence            32           011    888888776 333 232221    13577742       3 11     11         2


Q ss_pred             ----ecCCeeeeC--CCCCC-----C----CCccCCCC---CCCCCCCCCCCCeEEEEEEEEeecCCCCCCCeeEEEeee
Q psy7273         127 ----ASSNSECDG--DSGRG-----D----SSICSDVK---EEEPPPHLSPGTELQFRITVLQAVGISTEYSDIFCQFNF  188 (413)
Q Consensus       127 ----~~~~Gev~v--~~~~~-----~----~~~~~~~~---~~~~p~~l~~g~~ltf~V~I~~a~Glp~~~s~VfcQy~f  188 (413)
                          +..+|.+.+  .++..     |    ......+.   .+..++++..|..++|++++++|.+++.++.++||||+|
T Consensus       809 ~~~~g~~kg~lt~~~~~~~~d~e~~d~e~~~~~~~~~~~~~vs~~~~~~~~~~~~~~~~s~~~a~~~~~~~~~~~~~~~f  888 (1221)
T KOG0245|consen  809 VELQGQEKGMLTVAVQPVEADDEELDYEELRIVHGQGAAEEVSAILEDLQSGLSFTFRVSVIEAVDIAMEDLDSNCQERF  888 (1221)
T ss_pred             hhhhccccceeeeeccccccCCcccchhhhccccccCchhhccccccccccCCCcccchhhhhhccchhhhhhcccchhh
Confidence                333444432  22221     1    00000111   124468899999999999999999999999999999999


Q ss_pred             CCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEEEe------------------------------
Q psy7273         189 LHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFE------------------------------  238 (413)
Q Consensus       189 ~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~iE------------------------------  238 (413)
                      ++++++.|+++|+.|.+.+++..|+|+++|.+.+++.++.|+.+.+..||                              
T Consensus       889 l~~~~~~~s~~~l~~~g~~~~~~~~h~~~~~~~~~~~~~~~~~s~~~~~eq~~~~q~~~~~~~~~~~~~~~~~~~~~~~~  968 (1221)
T KOG0245|consen  889 LHRKDEALSGTPLQNSGRGGPGVRYHVTNFAVKIDKSEVFYFKSNPQHFEQFGHYQSGQQPSPLSPQELVSPTRCSRERR  968 (1221)
T ss_pred             ccccccccccCccccCCCCCCcccccccccccccccchhhhhccCcceeeeccccccccccCCccchhcccccccchhcc
Confidence            99999999999999898999999999999999999999999999999999                              


Q ss_pred             -----------------------------------------------------------eceEEEEecCceeeEEEEEEe
Q psy7273         239 -----------------------------------------------------------CRGLFLLHQGIQRRIRLTIVH  259 (413)
Q Consensus       239 -----------------------------------------------------------~~G~FqLhQGlQRRI~Vtl~h  259 (413)
                                                                                 +.|+|.||||+||||.+++-|
T Consensus       969 ~~~~~~s~~~~~~~l~~~~~~~~~~~k~l~~~L~~fe~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~q~~q~~~~~~~~~ 1048 (1221)
T KOG0245|consen  969 PPSMPRSKPVRATSLAKLSANRNGSVKSLETLLQWFEICEHEATPQYIQKAVDQAIQLPRQGVKLLHQGAQRRISVTILH 1048 (1221)
T ss_pred             CCCccccccccchHHHhhhhhccchhhcchhhHHHhhhhhhhccchhhhHHHhhccccccccccchhhhheeehhhhhhc
Confidence                                                                       889999999999999999999


Q ss_pred             ccCCceeeeeeeEEEeceeecCCCCCCCCCCCcceEEecccCCCceecCCCCCeEEEEEEEecCCCCCccccccccCCCC
Q psy7273         260 EQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNRISAHGE  339 (413)
Q Consensus       260 ~sG~~L~w~~i~~l~vG~vR~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~d~~~~~~~~a~WDSS~H~s~lLNRvT~~~~  339 (413)
                      + |.+|.|++|.++++|+||+.++ +   --|+ +++|+++++++++..+|++.+|.++|+||||+|++.+|||+|+++.
T Consensus      1049 E-~~~~~~~~vre~v~~~i~~~~~-~---~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~~~~~~~~~~~ 1122 (1221)
T KOG0245|consen 1049 E-GGELKWKDVRELVMGRIRNGPE-D---LYDP-ILSLNILSAEFPEGSHDDRTFFQMEAAWDSSLHNSELLNAVSPYKE 1122 (1221)
T ss_pred             c-ccchhHHHHHHHHhhhhhcCcc-c---chhH-HHhcCcchhhhcccccccchhhhhhhhhhhhhhhhhhhhccCcchh
Confidence            9 7799999999999999999877 2   2334 7799999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEEEEecCcCcceEEEEeeeEEEeccCCc-CcchhhhhhhccccccccccceeeEEEEEEEeccCCC
Q psy7273         340 QIFMTISAYLELENCGQPGIITKDLSLVIYGRDAR-TAPRTLKHLFSSSYKNNEANRLTGVYEMALKRANEAG  411 (413)
Q Consensus       340 rV~~tl~~~v~~~~~~~Pv~f~kdi~v~I~~R~~~-~~~~~~~~l~~~~~r~~~~~~~sgvf~v~l~~~~~~~  411 (413)
                      .||||++.+.++++|.+|++..||.|+-+|.|+++ +.+|+++++++   +..+.||++|||++.++..++.|
T Consensus      1123 ~i~~~~s~~~El~~c~~~~~~ak~~~~~~~~re~~is~~~~~k~~~~---~~~~~~rv~~v~~~~~~~~s~~~ 1192 (1221)
T KOG0245|consen 1123 KIYMTLSAYRELDLCMQPAVVAKDFCLLFYSREAKISASRSLKSLFG---LSPESNRVTGVYELSLCDCSDYG 1192 (1221)
T ss_pred             HHHHHHHHHHHHHhhhhhhhcccchheeehhhhhccCccHHHHHhhc---cchHhhhccchhhhhcccCCCcc
Confidence            99999999999999999999999999999999998 78889999987   55678999999999999988865

>PF12473 DUF3694: Kinesin protein ; InterPro: IPR022164 This domain family is found in eukaryotes, and is typically between 131 and 151 amino acids in length

Probab=100.00  E-value=2.6e-41  Score=300.87  Aligned_cols=127  Identities=40%  Similarity=0.712  Sum_probs=116.1

Q ss_pred             eceEEEEecCceeeEEEEEEeccCCceeeeeeeEEEeceeecCCCCCCCCCCCcceEEecccCCCceecCCCCCeEEEEE
Q psy7273         239 CRGLFLLHQGIQRRIRLTIVHEQVPEIRWKDVKELVVGRIRNTPEPEMDEDTDSSVLSLGLFVGEYLEIPGEDRSMFRFE  318 (413)
Q Consensus       239 ~~G~FqLhQGlQRRI~Vtl~h~sG~~L~w~~i~~l~vG~vR~~~~~~~~~~~~~~~l~L~~~~~~~~~~~~d~~~~~~~~  318 (413)
                      |+|+||||||+||||+|++.|++|..|+|++|++|+||+||++++  +..  ....++|++++.++     ||+++|+++
T Consensus        14 ~~g~F~LrqG~qRrI~v~l~~~sg~~l~~e~~~~v~vg~vR~~~~--~~~--~~~~~~l~~~~~~~-----~~~~~~~~~   84 (140)
T PF12473_consen   14 DGGIFQLRQGLQRRIQVTLKHESGSQLPWERCFGVLVGRVRLVDD--MHL--LDMVVSLPLISGPY-----DGTSSYSIE   84 (140)
T ss_pred             cCCcEeeeCCEeeeEEEEEEEeCCCCcceeeEeeeeecceEeccc--ccc--cceeeccccccccC-----CCccEEEEE
Confidence            569999999999999999999999999999999999999999843  442  22367788877655     889999999


Q ss_pred             EEecCCCCCccccccccCCCCEEEEEEEEEEEecCcCcceEEEEeeeEEEeccCCc
Q psy7273         319 AAWDSSLHNSPLLNRISAHGEQIFMTISAYLELENCGQPGIITKDLSLVIYGRDAR  374 (413)
Q Consensus       319 a~WDSS~H~s~lLNRvT~~~~rV~~tl~~~v~~~~~~~Pv~f~kdi~v~I~~R~~~  374 (413)
                      |+||||+|+|.+|||+|++++||||||+|+|++++|+|||+|+||+||+||+|+++
T Consensus        85 ~~WDss~h~s~~LNr~T~~~~rV~~tv~~~v~~~~~~ePv~f~~di~v~I~~r~~~  140 (140)
T PF12473_consen   85 ASWDSSLHNSLLLNRVTPKGERVYMTVAVDVVISHCQEPVRFRKDICVRIYPRDEF  140 (140)
T ss_pred             EeecccCCcHHHcCCCCCCCCEEEEEEEEEEEeCCCCCceEEEEEEEEEEeCCCCC
Confidence            99999999999999999999999999999999999999999999999999999974

The family is found in association with PF00225 from PFAM, PF00498 from PFAM. There is a single completely conserved residue W that may be functionally important.

>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function

Probab=87.56  E-value=1.3  Score=38.35  Aligned_cols=51  Identities=27%  Similarity=0.569  Sum_probs=30.1

Q ss_pred             eEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEEEe
Q psy7273         182 IFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLVFE  238 (413)
Q Consensus       182 VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~iE  238 (413)
                      +||=|.|++ .| .-+| |+-   .+....|+.+-.+.|.+..-|+.||..+.+.||
T Consensus         1 tFct~dFyd-fE-tq~T-pvv---~G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lE   51 (107)
T PF11618_consen    1 TFCTYDFYD-FE-TQTT-PVV---RGLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLE   51 (107)
T ss_dssp             EEEEE-STT-----EE----E---ESSS----EEEEEEE--SHHHHHHHHH--EEEE
T ss_pred             CEEEEEeec-ee-eecc-cce---eCCCccceeEEEEEEEcCHHHHHHhhcCCEEEE
Confidence            699999994 34 3344 443   135778899999999999999999999999988

It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.

>PF12423 KIF1B: Kinesin protein 1B; InterPro: IPR022140 This domain family is found in eukaryotes, and is approximately 50 amino acids in length

Probab=86.35  E-value=0.38  Score=35.17  Aligned_cols=25  Identities=8%  Similarity=-0.019  Sum_probs=16.3

Q ss_pred             cchhhhccc-CCCCCCCCCCCCCCCC
Q psy7273          94 RSLLHTSAP-ALSCSSELPCYKPSEY  118 (413)
Q Consensus        94 RemY~~~~~-~~p~~~~~f~~e~p~y  118 (413)
                      |||||++.+ ..|.+.++++.+||+|
T Consensus         9 RemYq~~~~~~~~~~~~~~~~~DPF~   34 (45)
T PF12423_consen    9 REMYQQYKENDFPEYDQHFKEDDPFY   34 (45)
T ss_pred             HHHHHHHHhcCCccccccCCCCCCCC
Confidence            999999932 1356555666566665

The family is found in association with PF00225 from PFAM, PF00498 from PFAM. KIF1B is an anterograde motor for transport of mitochondria in axons of neuronal cells.

>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking

Probab=84.44  E-value=7.4  Score=29.59  Aligned_cols=53  Identities=13%  Similarity=0.203  Sum_probs=39.6

Q ss_pred             EEEEEEeecCCCC-C---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273         165 FRITVLQAVGIST-E---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV  220 (413)
Q Consensus       165 f~V~I~~a~Glp~-~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v  220 (413)
                      .+|+|.+|.||+. +   ..+.||.+.+.+.....+.|....++   ....|+.+..|.+
T Consensus         1 L~v~I~~a~~L~~~~~~~~~~~yv~v~~~~~~~~~~~T~~~~~~---~~P~w~e~~~~~~   57 (85)
T PF00168_consen    1 LTVTIHSARNLPSKDSNGKPDPYVRVSVNGSESTKYKTKVKKNT---SNPVWNEEFEFPL   57 (85)
T ss_dssp             EEEEEEEEESSSSSSTTSSBEEEEEEEEETTTCEEEEECCBSSB---SSEEEEEEEEEEE
T ss_pred             CEEEEEEEECCCCcccCCcccccceeecceeeeeeeeeeeeecc---ccceeeeeeeeee
Confidence            3689999999994 4   34599999998755556777665543   5889997777775

C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	413
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 61/484 (12%), Positives = 129/484 (26%), Gaps = 174/484 (35%)

Query: 1   MTMSLYSSYTPDDFNTEEDIFECTWTEREFALAAWAFRKWKYHQF-TSLR--DDLWGNAI 57
           M   L     P+ + +  D        R  ++ A   R  K   +   L    ++     
Sbjct: 201 MLQKLLYQIDPN-WTSRSDH-SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258

Query: 58  FLKEANAISVELKKKTRSVMVTAGEVIVPSVLTSRKRSLLHTSAPALSCSSELPCYKPSE 117
           +   A      L  K               +LT+R + +    + A +    L  +  + 
Sbjct: 259 W--NA----FNLSCKI--------------LLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 118 YPPNTRTYSASSNSECDGDSGRGDSSICSDVKEEEPPP---HLSPGTELQFRITVLQAVG 174
            P   ++                      D + ++ P      +P      R+++     
Sbjct: 299 TPDEVKSLLLK----------------YLDCRPQDLPREVLTTNP-----RRLSI----- 332

Query: 175 ISTEYSDIFCQF-NFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQ 233
           I+    D    + N+ H + +  +T                       + +S +  L+  
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTT-----------------------IIESSLNVLEPA 369

Query: 234 PLVFECRGLFLLHQGIQRRIRLTI----VH--EQVPEIRWKDVKELVVGRIRNTPEPEMD 287
               E R +F          RL++     H    +  + W DV +       +     ++
Sbjct: 370 ----EYRKMFD---------RLSVFPPSAHIPTILLSLIWFDVIK-------SDVMVVVN 409

Query: 288 EDTDSSVLSLGLFVGEYLEIPGEDRSMFRFEAAWDSSLHNSPLLNR-------------- 333
           +    S++           IP     + + +   + +LH S +++               
Sbjct: 410 KLHKYSLVEKQPKESTI-SIPSIYLEL-KVKLENEYALHRS-IVDHYNIPKTFDSDDLIP 466

Query: 334 ----------ISAH------GEQIFMTISAYLELE-----------NCGQPGIITKDLS- 365
                     I  H       E++ +    +L+                  G I   L  
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526

Query: 366 LVIYGR----DARTAPRTLK-----------HLFSSSYKN-------NEANRLTGVYEMA 403
           L  Y      +     R +            +L  S Y +        E      ++E A
Sbjct: 527 LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDE---AIFEEA 583

Query: 404 LKRA 407
            K+ 
Sbjct: 584 HKQV 587

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	413
2yrb_A	156	Protein fantom; beta sandwich, NPPSFA, national pr	93.26
1rlw_A	126	Phospholipase A2, CALB domain; hydrolase, C2 domai	88.15

>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1

Probab=93.26  E-value=0.26  Score=44.11  Aligned_cols=78  Identities=24%  Similarity=0.462  Sum_probs=56.6

Q ss_pred             CCCCCCCCeEEEEEEEEeecCCC-------CCCCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhH
Q psy7273         154 PPHLSPGTELQFRITVLQAVGIS-------TEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSF  226 (413)
Q Consensus       154 p~~l~~g~~ltf~V~I~~a~Glp-------~~~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~f  226 (413)
                      -.+|.+|..+ |.|-|.++.==|       .....+||=|.|++ .| +-+| |+-   .+....|+.+..+.|.+..-|
T Consensus        10 ~~~l~~gEnl-fEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~d-fE-tq~T-pv~---~G~~p~y~fts~Y~V~~d~~f   82 (156)
T 2yrb_A           10 TIHLERGENL-FEIHINKVTFSSEVLQASGDKEPVTFCTYAFYD-FE-LQTT-PVV---RGLHPEYNFTSQYLVHVNDLF   82 (156)
T ss_dssp             CSSCCSSCEE-EEEEEEEECCCHHHHHHHCSSCCEEEEEECSTT-CC-CEEC-CCE---ESSSCCCCEEEEEEECCSHHH
T ss_pred             hhhccCCCcE-EEEEEeEEEEcHHHHhhccccCCcEEEEEEEec-eE-eeec-ccc---cCCCCCcceEEEEEEEeCHHH
Confidence            3466676665 788888876222       22345999999994 33 4445 433   135778888999999999999


Q ss_pred             HHHhhcCCEEEe
Q psy7273         227 IEYLKTQPLVFE  238 (413)
Q Consensus       227 i~~l~~~~l~iE  238 (413)
                      +.||..+.+.+|
T Consensus        83 l~yL~~~~l~lE   94 (156)
T 2yrb_A           83 LQYIQKNTITLE   94 (156)
T ss_dssp             HHHHHHCCEEEE
T ss_pred             HHHHhcCCEEEE
Confidence            999999999887

>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1

Probab=88.15  E-value=6.9  Score=31.49  Aligned_cols=65  Identities=14%  Similarity=0.192  Sum_probs=46.9

Q ss_pred             EEEEEEEeecCCCC-------CCCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhHHHHhhcCCEE
Q psy7273         164 QFRITVLQAVGIST-------EYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEYLKTQPLV  236 (413)
Q Consensus       164 tf~V~I~~a~Glp~-------~~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~l~~~~l~  236 (413)
                      .++|+|.+|.+||.       ..+|-||.+.+.+.....+.|..++++   ....|+.+..|.+...       ....|.
T Consensus         4 ~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t---~nP~wne~f~f~v~~~-------~~~~l~   73 (126)
T 1rlw_A            4 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND---INPVWNETFEFILDPN-------QENVLE   73 (126)
T ss_dssp             EEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC---SSCEEEEEEEEEECTT-------SCCEEE
T ss_pred             EEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCC---CCCcccceEEEEecCC-------CCCEEE
Confidence            57899999999996       457899999998655566777665533   4778887777776322       245677


Q ss_pred             Ee
Q psy7273         237 FE  238 (413)
Q Consensus       237 iE  238 (413)
                      |+
T Consensus        74 i~   75 (126)
T 1rlw_A           74 IT   75 (126)
T ss_dssp             EE
T ss_pred             EE
Confidence            77

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	413
d2yrba1	142	Fantom {Human (Homo sapiens) [TaxId: 9606]}	91.2
d1dqva1	130	Synaptotagmin III {Rat (Rattus norvegicus) [TaxId:	87.25
d1rlwa_	126	Domain from cytosolic phospholipase A2 {Human (Hom	84.72
d1rsya_	143	Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10	83.85

>d2yrba1 b.7.1.1 (A:596-737) Fantom {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Fantom
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.20  E-value=0.35  Score=40.59  Aligned_cols=75  Identities=23%  Similarity=0.469  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEEEEEee-------cCCCCCCCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEEecCHhHHHH
Q psy7273         157 LSPGTELQFRITVLQA-------VGISTEYSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITVPVSKSFIEY  229 (413)
Q Consensus       157 l~~g~~ltf~V~I~~a-------~Glp~~~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v~vTe~fi~~  229 (413)
                      |.+|..+ |.|-|.++       .++...-..+||=|.|++ +|. -+| |+-   .+....|+++-.+.|.+..-|++|
T Consensus         5 l~~gEnl-fEihi~~~~~s~e~l~~~~d~~p~tF~T~~Fyd-~Et-q~T-Pv~---~g~~p~ynfts~Y~V~~d~~fl~Y   77 (142)
T d2yrba1           5 LERGENL-FEIHINKVTFSSEVLQASGDKEPVTFCTYAFYD-FEL-QTT-PVV---RGLHPEYNFTSQYLVHVNDLFLQY   77 (142)
T ss_dssp             CCSSCEE-EEEEEEEECCCHHHHHHHCSSCCEEEEEECSTT-CCC-EEC-CCE---ESSSCCCCEEEEEEECCSHHHHHH
T ss_pred             ecCCCcE-EEEEEeeEEEcHHHHhhccCCCCcEEEEEEEEe-eee-ecC-cee---cCCCCcceeEEEEEEccCHHHHHH
Confidence            4455443 67777776       222222334999999995 442 234 433   234568999999999999999999


Q ss_pred             hhcCCEEEe
Q psy7273         230 LKTQPLVFE  238 (413)
Q Consensus       230 l~~~~l~iE  238 (413)
                      |....+.+|
T Consensus        78 L~~~~~~le   86 (142)
T d2yrba1          78 IQKNTITLE   86 (142)
T ss_dssp             HHHCCEEEE
T ss_pred             HhhCCEEEE
Confidence            999999888

>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin III
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.25  E-value=1.3  Score=34.94  Aligned_cols=54  Identities=22%  Similarity=0.380  Sum_probs=39.2

Q ss_pred             EEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273         164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV  220 (413)
Q Consensus       164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v  220 (413)
                      .++|+|++|.+|| .+   .+|.||+..+.......+.|...+++   ....|+.+..|.+
T Consensus        19 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~l~~~~~~~~kT~v~~~t---~~P~wne~f~f~v   76 (130)
T d1dqva1          19 QLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKT---LNPIFNETFQFSV   76 (130)
T ss_dssp             EEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSC---SSCEEEEEEEEEC
T ss_pred             EEEEEEEeeeCCccccCCCCcceEEEEEEccCCCceEeceeEcCC---CCeeeeeEEEEEE
Confidence            5679999999998 33   45799999998655556777665533   3677887666654

>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from cytosolic phospholipase A2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.72  E-value=5.4  Score=30.51  Aligned_cols=55  Identities=15%  Similarity=0.188  Sum_probs=39.9

Q ss_pred             EEEEEEEEeecCCCC-C------CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273         163 LQFRITVLQAVGIST-E------YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV  220 (413)
Q Consensus       163 ltf~V~I~~a~Glp~-~------~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v  220 (413)
                      -.++|+|++|.+||. .      -+|-||.+.+.......+.|....++   ....|+.+..|.+
T Consensus         3 ~~l~V~v~~a~~L~~~~~~d~~~~~Dpyv~v~l~~~~~~~~~T~~~~~t---~nP~wne~f~f~i   64 (126)
T d1rlwa_           3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNND---INPVWNETFEFIL   64 (126)
T ss_dssp             EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTC---SSCEEEEEEEEEE
T ss_pred             cEEEEEEEEccCCCCccccccCCCCCcEEEEEECCcccceeEeeecCCC---ccceeceeeeecc
Confidence            368999999999994 2      34689999987656666777665543   3557888777766

>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.85  E-value=1.4  Score=35.12  Aligned_cols=54  Identities=20%  Similarity=0.271  Sum_probs=38.8

Q ss_pred             EEEEEEEeecCCC-CC---CCeeEEEeeeCCCcccceecCcccCCCCCcceEEeEEEEEEE
Q psy7273         164 QFRITVLQAVGIS-TE---YSDIFCQFNFLHRHDEAFSTEPVKNTGKGTPLGFYHIQNITV  220 (413)
Q Consensus       164 tf~V~I~~a~Glp-~~---~s~VfcQy~f~~~~e~~~st~p~~~~~~~~~~~F~h~~~~~v  220 (413)
                      .++|+|++|.+|| .+   .+|.||...+.......+-|...+++   ....|+++..|.+
T Consensus        35 ~L~V~V~~a~~L~~~~~~g~~dpyV~v~l~~~~~~~~kT~~~~~t---~~P~wne~f~f~i   92 (143)
T d1rsya_          35 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKT---LNPVFNEQFTFKV   92 (143)
T ss_dssp             EEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTC---SSCEEEEEEEECC
T ss_pred             EEEEEEEEccCCCCCCCCCCCCeEEEEEEcCCCCeeEEEEEeccc---cCcceeeeeEEEE
Confidence            5789999999998 33   46799999887655556667665533   3567887776654