Psyllid ID: psy7453

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Protein Sequence
MLVTITPTLAKVFLVILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH
Secondary Structure (PSIPRED)
ccccccccHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHccccccccccccHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHccccccccHHHccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccEEccHHHHHHHHHHHcccHHHcccccccHHEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHEEEEcccccccccHHHHHHHccccHHHHHcccccEEcccccccccccHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccEEccccccEEcHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MLVTITPTLAKVFLVILEptlernrtnitsDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTtiptqnhslckhchsqlshldlldhcktcsymirpnanntfspFCIYCKAVLSTNLNELIEHCRTcksmirtdpfrhkfvcyacdyfsynigcmrshirthtgekpyacgqcafrsasvAGLHYHLKKTYH
Flexible Loop (DISEMBL)
mlvtitptlaKVFLVILEptlernrtnitSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH
Low Complexity Region (SEG)
MLVTITPTLAKVFLVILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQilnlnlsvllvttiPTQNHSLCKhchsqlshldlldhcKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH
Disordered region (IsUnstruct)
**VTITPTLAKVFLVILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL*****
Disordered Region (DISOPRED)
*****TPTL*********************DVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLS*********TCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH*HL*****
Disordered Region (DISEMBL)
MLVTITPTLAKVFLVILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH
Disordered Region (DISPRO)
MLVTITPTLAKVFLVILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLVTITPTLAKVFLVILEPTLERNRTNITSDVYIAVLVFSNLTFFITAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	200	2.2.26 [Sep-21-2011]
Q8VIG1	1082	RE1-silencing transcripti	yes	N/A	0.485	0.089	0.285	1e-07
O54963	1069	RE1-silencing transcripti	yes	N/A	0.485	0.090	0.276	1e-07
Q08705	728	Transcriptional repressor	yes	N/A	0.38	0.104	0.382	3e-07
Q61164	736	Transcriptional repressor	no	N/A	0.38	0.103	0.382	4e-07
Q9R1D1	737	Transcriptional repressor	no	N/A	0.38	0.103	0.382	4e-07
P49711	727	Transcriptional repressor	yes	N/A	0.38	0.104	0.382	4e-07
A2APF3	636	Transcriptional repressor	no	N/A	0.38	0.119	0.393	1e-06
Q13127	1097	RE1-silencing transcripti	no	N/A	0.485	0.088	0.267	1e-06
Q03172	2688	Zinc finger protein 40 OS	no	N/A	0.485	0.036	0.267	1e-06
Q2EI21	1501	RE1-silencing transcripti	N/A	N/A	0.49	0.065	0.292	2e-06

>sp|Q8VIG1|REST_MOUSE RE1-silencing transcription factor OS=Mus musculus GN=Rest PE=2 SV=2

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 15/112 (13%)

Query: 95  CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
           C  C Y       N +  +  + K  L    NE I  C  C          +  +R    
Sbjct: 213 CDRCGY-----NTNRYDHYMAHLKHHLRAGENERIYKCIICTYTTVSEYHWRKHLRNHFP 267

Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
           R  + C  C+YFS        H+RTHTGE+PY C  C + S+    L  H++
Sbjct: 268 RKVYTCSKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 319

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.
Mus musculus (taxid: 10090)

>sp|O54963|REST_RAT RE1-silencing transcription factor OS=Rattus norvegicus GN=Rest PE=2 SV=1

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 15/112 (13%)

Query: 95  CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
           C  C Y       N +  +  + K  L    NE +  C  C          +  +R    
Sbjct: 217 CDRCGY-----NTNRYDHYTAHLKHHLRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 271

Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
           R  + C  C+YFS        H+RTHTGE+PY C  C + S+    L  H++
Sbjct: 272 RKVYTCSKCNYFSTEKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 323

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Rattus norvegicus (taxid: 10116)

>sp|Q08705|CTCF_CHICK Transcriptional repressor CTCF OS=Gallus gallus GN=CTCF PE=1 SV=1

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
           C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 520

Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
           KPYAC  C   FR   +  +H+   K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

Acts as both a transcriptional activator and repressor of the MYC gene.

Gallus gallus (taxid: 9031)

>sp|Q61164|CTCF_MOUSE Transcriptional repressor CTCF OS=Mus musculus GN=Ctcf PE=1 SV=2

 Score = 54.7 bits (130), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
           C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
           KPYAC  C   FR   +  +H+   K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping (By similarity). Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Mus musculus (taxid: 10090)

>sp|Q9R1D1|CTCF_RAT Transcriptional repressor CTCF OS=Rattus norvegicus GN=Ctcf PE=2 SV=1

 Score = 54.7 bits (130), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
           C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
           KPYAC  C   FR   +  +H+   K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Rattus norvegicus (taxid: 10116)

>sp|P49711|CTCF_HUMAN Transcriptional repressor CTCF OS=Homo sapiens GN=CTCF PE=1 SV=1

 Score = 54.7 bits (130), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
           C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct: 469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query: 174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
           KPYAC  C   FR   +  +H+   K YH
Sbjct: 521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X- inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Homo sapiens (taxid: 9606)

>sp|A2APF3|CTCFL_MOUSE Transcriptional repressor CTCFL OS=Mus musculus GN=Ctcfl PE=1 SV=1

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 13/89 (14%)

Query: 114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
           C YC A        LI+H RT K+         KF C  CDY      C+++H+R HTGE
Sbjct: 460 CRYCPAGFHERY-ALIQHQRTHKN-------EKKFKCKQCDYACKQERCLKAHMRMHTGE 511

Query: 174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
           KP++C  C   FR   +  L  HL+K YH
Sbjct: 512 KPFSCLACNKHFRQKQL--LTVHLRK-YH 537

Testis-specific DNA binding protein responsible for insulator function, nuclear architecture and transcriptional control, which probably acts by recruiting epigenetic chromatin modifiers. Plays a key role in gene imprinting in male germline, by participating in the establishment of differential methylation at the IGF2/H19 imprinted control region (ICR). Directly binds the unmethylated H19 ICR and recruits the PRMT7 methyltransferase, leading to methylate histone H4 'Arg-3' to form H4R3sme2. This probably leads to recruit de novo DNA methyltransferases at these sites. Seems to act as tumor suppressor. In association with DNMT1 and DNMT3B, involved in activation of BAG1 gene expression by binding to its promoter. Required for dimethylation of H3 lysine 4 (H3K4me2) of MYC and BRCA1 promoters.

Mus musculus (taxid: 10090)

>sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 15/112 (13%)

Query: 95  CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
           C  C Y       N +  +  + K       NE +  C  C          +  +R    
Sbjct: 218 CDRCGY-----NTNRYDHYTAHLKHHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272

Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
           R  + C  C+YFS        H+RTHTGE+PY C  C + S+    L  H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.

Homo sapiens (taxid: 9606)

>sp|Q03172|ZEP1_MOUSE Zinc finger protein 40 OS=Mus musculus GN=Hivep1 PE=1 SV=1

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 102 IRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH--KFVCYACDYFSYN 159
           + P ++    P  IY  A +++ +++ +E  + C  ++R    +   K++C  C+     
Sbjct: 361 VSPASSTQSPPGPIYSSAHVASVVSQSVE--QMCSLLLRDQKPKKQGKYICEYCNRACAK 418

Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
              +  HIR+HTGE+PY C  C F   + + L+ H K   H
Sbjct: 419 PSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH 459

Transcription factor which binds specifically to the palindromic sequence 5'-GGGAAATCCC-3' in the alpha-A crystallin promoter.

Mus musculus (taxid: 10090)

>sp|Q2EI21|RESTA_XENLA RE1-silencing transcription factor A OS=Xenopus laevis GN=rest-a PE=2 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 15/113 (13%)

Query: 94  HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDP 143
            C  C Y       N F  +  + K       NE +  C  C          K  +R   
Sbjct: 215 QCDGCGY-----NTNRFDHYLAHLKHHNKAGENERVYKCTICTYSTVSEYHWKKHLRNHY 269

Query: 144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
            R  + C  C YFS        HIRTHTGE+PY C  C + S+    L  H++
Sbjct: 270 PRILYTCSQCSYFSDRKNNYIQHIRTHTGERPYQCIICLYSSSQKTHLTRHMR 322

Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells (By similarity). Plays a role in the early development of the nervous system and is required for proper patterning of the neuroectoderm during gastrulation. This involves the correct speciation of the neuroepithelial domain and adequate development of the non-neural ectoderm.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
260792114	921	hypothetical protein BRAFLDRAFT_69373 [B	0.655	0.142	0.262	4e-08
260810935	1052	hypothetical protein BRAFLDRAFT_66686 [B	0.19	0.036	0.406	1e-06
391346127	1161	PREDICTED: uncharacterized protein LOC10	0.41	0.070	0.317	1e-06
260823036	1004	hypothetical protein BRAFLDRAFT_71723 [B	0.21	0.041	0.464	2e-06
444518559	1981	Leucine-rich repeat-containing protein 1	0.525	0.053	0.328	3e-06
357609802	671	putative CTCF-like protein [Danaus plexi	0.405	0.120	0.350	3e-06
260813386	1077	hypothetical protein BRAFLDRAFT_103420 [	0.285	0.052	0.413	3e-06
391343767	299	PREDICTED: zinc finger protein 775-like	0.37	0.247	0.383	4e-06
355749386	1095	Neural-restrictive silencer factor [Maca	0.485	0.088	0.276	4e-06
432950074	473	PREDICTED: zinc finger and SCAN domain-c	0.515	0.217	0.313	4e-06

>gi|260792114|ref|XP_002591072.1| hypothetical protein BRAFLDRAFT_69373 [Branchiostoma floridae] gi|229276272|gb|EEN47083.1| hypothetical protein BRAFLDRAFT_69373 [Branchiostoma floridae]

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 44/175 (25%)

Query: 69  TTIPTQNHSLCKHC-------HSQLSHLDLLD-----HCKTCSY--------MIRPNANN 108
           T +  +   +CK C       H+ L+HL L        C  C Y         +    N 
Sbjct: 664 THVEKKTPLVCKKCGYQTIRKHNFLAHLRLHTGEKPFSCGQCDYKTAFKTSLTLHFKTNK 723

Query: 109 TFSP-------FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV------------ 149
           +  P       F   CK  + T+L +    C+TC +++ +     K V            
Sbjct: 724 SKEPLSCEDCSFSTTCKRAMRTHLKDHTYACKTCDAVLNSKEELQKHVRNHQKEESEKAL 783

Query: 150 -CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL----KKTY 199
            C  CDY +++  C+  H+R HTGEKP+AC +C++R+ + + L  H+    KKT+
Sbjct: 784 RCKVCDYKAFSRPCLEIHMRKHTGEKPFACQECSYRAKAKSTLKIHIANKHKKTF 838

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260810935|ref|XP_002600178.1| hypothetical protein BRAFLDRAFT_66686 [Branchiostoma floridae] gi|229285464|gb|EEN56190.1| hypothetical protein BRAFLDRAFT_66686 [Branchiostoma floridae]

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 36/59 (61%)

Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
           +RT      + CY C+Y +     +  HI+THTGEKPY CG+C +R+  ++ L  H+KK
Sbjct: 474 MRTHTSERPYRCYQCNYSARTKSHLDVHIKTHTGEKPYMCGECGYRATQMSTLRSHMKK 532

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|391346127|ref|XP_003747330.1| PREDICTED: uncharacterized protein LOC100905253 [Metaseiulus occidentalis]

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 44/82 (53%)

Query: 118  KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA 177
            KA+   + N + EH    +  ++      ++ C  C+Y +     + +H+RTHT EKP++
Sbjct: 1041 KALKCVHCNYITEHRSYLQRHMKAHAEGKRYQCLECEYRTARSDHLNNHMRTHTSEKPFS 1100

Query: 178  CGQCAFRSASVAGLHYHLKKTY 199
            C QC FR A  A L+ HL + +
Sbjct: 1101 CNQCDFRCAQQATLYNHLNRRH 1122

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260823036|ref|XP_002603989.1| hypothetical protein BRAFLDRAFT_71723 [Branchiostoma floridae] gi|229289314|gb|EEN60000.1| hypothetical protein BRAFLDRAFT_71723 [Branchiostoma floridae]

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 32/56 (57%)

Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH 194
           +RT   R  F C  CDY +     +  HI THTGEKPY CG+C FR+A  + L  H
Sbjct: 884 MRTHSGRKPFKCDQCDYCAARKCTLDRHIMTHTGEKPYMCGECGFRTADTSDLSRH 939

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|444518559|gb|ELV12229.1| Leucine-rich repeat-containing protein 16C [Tupaia chinensis]

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 20/125 (16%)

Query: 79  CKHCHSQLSHL-DLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKS 137
           C HC + ++   DL  H +     I           C YC AV       LI+H ++ K+
Sbjct: 326 CPHCDTVIARKSDLGVHLRKQHSYIEQGKK------CRYCDAVFHERY-ALIQHQKSHKN 378

Query: 138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHL 195
                    +F C  CDY       M  H RTHTGEKPYAC  C   FR   +  +H+  
Sbjct: 379 -------EKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHF-- 429

Query: 196 KKTYH 200
            K YH
Sbjct: 430 -KRYH 433

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|357609802|gb|EHJ66686.1| putative CTCF-like protein [Danaus plexippus]

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 16/97 (16%)

Query: 105 NANNTFSP-FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH----KFVCYACDYFSYN 159
           N +N   P  C YCK+  +T+  EL+ H R          +RH       C  CDY S  
Sbjct: 255 NMHNGVKPHVCKYCKSPFTTS-GELVRHVR----------YRHTHEKPHKCSECDYASVE 303

Query: 160 IGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
           +  +R H+R HTGE+PY C  C + S     L  HL+
Sbjct: 304 LSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLR 340

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260813386|ref|XP_002601399.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae] gi|229286694|gb|EEN57411.1| hypothetical protein BRAFLDRAFT_103420 [Branchiostoma floridae]

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
           +RT      + C  CDYF+     +  H+RTHTGEKPY CG+C +R+A ++ L  H++
Sbjct: 897 MRTHTGEKSYKCDQCDYFAARKSNLDRHLRTHTGEKPYMCGECGYRAAQMSDLSKHMR 954

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|391343767|ref|XP_003746177.1| PREDICTED: zinc finger protein 775-like [Metaseiulus occidentalis]

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 12/86 (13%)

Query: 112 PFCIYCKAVLSTNL-NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH 170
           P C Y     STNL N L  H          +PF    +C  C+Y S     +R H R H
Sbjct: 44  PSCKYTTHSYSTNLRNHLFGH-------FGANPF----ICGKCNYRSERFDSLRKHCRVH 92

Query: 171 TGEKPYACGQCAFRSASVAGLHYHLK 196
           TGE+PYAC  C +RS + + LH H++
Sbjct: 93  TGERPYACPICGYRSKTNSNLHAHIR 118

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|355749386|gb|EHH53785.1| Neural-restrictive silencer factor [Macaca fascicularis]

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 15/112 (13%)

Query: 95  CKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTC----------KSMIRTDPF 144
           C  C Y       N + P+  + K       NE +  C  C          +  +R    
Sbjct: 218 CDRCGY-----NTNRYDPYTAHLKRHTRAGDNERVYKCIICTYTTVSEYHWRKHLRNHFP 272

Query: 145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
           R  + C  C+YFS        H+RTHTGE+PY C  C + S+    L  H++
Sbjct: 273 RKVYTCGKCNYFSDRKNNYVQHVRTHTGERPYKCELCPYSSSQKTHLTRHMR 324

Source: Macaca fascicularis

Species: Macaca fascicularis

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432950074|ref|XP_004084376.1| PREDICTED: zinc finger and SCAN domain-containing protein 2-like [Oryzias latipes]

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 15/118 (12%)

Query: 79  CKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM 138
           CK C S  S +  L      ++MI       F+  C  C    S        H    KS 
Sbjct: 247 CKECDSSFSQISSLK-----THMITHTGEKPFT--CKECDTSFS--------HISYLKSH 291

Query: 139 IRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
           +RT      F C  CD     I  ++SH+RTHTGEKPY+C +C    + ++ L  H++
Sbjct: 292 MRTHTGEKPFTCKECDSSFSQISSLKSHMRTHTGEKPYSCKECDSSFSRISSLKRHMR 349

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
UNIPROTKB|P49711	727	CTCF "Transcriptional represso	0.38	0.104	0.382	3.5e-09
UNIPROTKB|E2RJR9	728	CTCF "Uncharacterized protein"	0.38	0.104	0.382	3.5e-09
MGI|MGI:109447	736	Ctcf "CCCTC-binding factor" [M	0.38	0.103	0.382	3.6e-09
RGD|621344	737	Ctcf "CCCTC-binding factor (zi	0.38	0.103	0.382	3.6e-09
UNIPROTKB|Q9R1D1	737	Ctcf "Transcriptional represso	0.38	0.103	0.382	3.6e-09
UNIPROTKB|F1NFT1	728	CTCF "Transcriptional represso	0.38	0.104	0.382	5.6e-09
UNIPROTKB|E1BZC3	733	CTCF "Transcriptional represso	0.38	0.103	0.382	5.7e-09
UNIPROTKB|Q08705	728	CTCF "Transcriptional represso	0.38	0.104	0.382	7.2e-09
RGD|2321501	635	Ctcfl "CCCTC-binding factor (z	0.38	0.119	0.382	3.9e-08
UNIPROTKB|I3L710	399	LOC100624697 "Uncharacterized	0.38	0.190	0.382	3.9e-08

UNIPROTKB|P49711 CTCF "Transcriptional repressor CTCF" [Homo sapiens (taxid:9606)]

 Score = 133 (51.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0008270 "zinc ion binding" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0000793 "condensed chromosome" evidence=IDA

GO:0000775 "chromosome, centromeric region" evidence=IDA

GO:0070602 "regulation of centromeric sister chromatid cohesion" evidence=NAS

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP;IDA

GO:0016584 "nucleosome positioning" evidence=IDA

GO:0043035 "chromatin insulator sequence binding" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0040029 "regulation of gene expression, epigenetic" evidence=IMP

GO:0040030 "regulation of molecular function, epigenetic" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003714 "transcription corepressor activity" evidence=TAS

UNIPROTKB|E2RJR9 CTCF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 133 (51.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000793 "condensed chromosome" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:109447 Ctcf "CCCTC-binding factor" [Mus musculus (taxid:10090)]

 Score = 133 (51.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

GO:0000775 "chromosome, centromeric region" evidence=ISO

GO:0000793 "condensed chromosome" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005694 "chromosome" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

GO:0006306 "DNA methylation" evidence=IDA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IMP;IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009048 "dosage compensation by inactivation of X chromosome" evidence=TAS

GO:0010216 "maintenance of DNA methylation" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=ISO;IMP

GO:0010629 "negative regulation of gene expression" evidence=IMP

GO:0016568 "chromatin modification" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=ISO

GO:0031060 "regulation of histone methylation" evidence=IMP

GO:0035065 "regulation of histone acetylation" evidence=IMP

GO:0040029 "regulation of gene expression, epigenetic" evidence=ISO

GO:0040030 "regulation of molecular function, epigenetic" evidence=ISO

GO:0043035 "chromatin insulator sequence binding" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

RGD|621344 Ctcf "CCCTC-binding factor (zinc finger protein)" [Rattus norvegicus (taxid:10116)]

 Score = 133 (51.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

GO:0000775 "chromosome, centromeric region" evidence=IEA;ISO

GO:0000793 "condensed chromosome" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=ISO;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0006306 "DNA methylation" evidence=ISO

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA;ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISO

GO:0007059 "chromosome segregation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA;ISO

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0010629 "negative regulation of gene expression" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA;ISO

GO:0031060 "regulation of histone methylation" evidence=IEA;ISO

GO:0035065 "regulation of histone acetylation" evidence=IEA;ISO

GO:0040029 "regulation of gene expression, epigenetic" evidence=ISO

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA;ISO

GO:0043035 "chromatin insulator sequence binding" evidence=IEA;ISO

GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA;ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

UNIPROTKB|Q9R1D1 Ctcf "Transcriptional repressor CTCF" [Rattus norvegicus (taxid:10116)]

 Score = 133 (51.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 520

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

GO:0000793 "condensed chromosome" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F1NFT1 CTCF "Transcriptional repressor CTCF" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 520

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BZC3 CTCF "Transcriptional repressor CTCF" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   474 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 525

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   526 KPYACSHCDKTFRQKQLLDMHF---KRYH 551

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0000793 "condensed chromosome" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|Q08705 CTCF "Transcriptional repressor CTCF" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   469 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMVMHKRTHTGE 520

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   521 KPYACSHCDKTFRQKQLLDMHF---KRYH 546

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

RGD|2321501 Ctcfl "CCCTC-binding factor (zinc finger protein)-like" [Rattus norvegicus (taxid:10116)]

 Score = 136 (52.9 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 34/89 (38%), Positives = 45/89 (50%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC A        L++H RT K+         KF C  CDY      C+ +H+RTHTGE
Sbjct:   458 CRYCPAAFHERY-ALLQHQRTHKN-------EKKFKCKQCDYACKQERCLTAHMRTHTGE 509

Query:   174 KPYACGQCA--FRSASVAGLHYHLKKTYH 200
             +P++C  C   FR   +  L  HL+K YH
Sbjct:   510 RPFSCLTCNKHFRQKQL--LTVHLRK-YH 535

GO:0003677 "DNA binding" evidence=ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0016571 "histone methylation" evidence=IEA;ISO

GO:0042393 "histone binding" evidence=IEA;ISO

GO:0043046 "DNA methylation involved in gamete generation" evidence=IEA;ISO

GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0051569 "regulation of histone H3-K4 methylation" evidence=IEA;ISO

UNIPROTKB|I3L710 LOC100624697 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 133 (51.9 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 34/89 (38%), Positives = 42/89 (47%)

Query:   114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE 173
             C YC AV       LI+H ++ K+         +F C  CDY       M  H RTHTGE
Sbjct:   141 CRYCDAVFHERY-ALIQHQKSHKN-------EKRFKCDQCDYACRQERHMIMHKRTHTGE 192

Query:   174 KPYACGQC--AFRSASVAGLHYHLKKTYH 200
             KPYAC  C   FR   +  +H+   K YH
Sbjct:   193 KPYACSHCDKTFRQKQLLDMHF---KRYH 218

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	200
KOG2462|consensus	279		99.95
KOG2462|consensus	279		99.9
KOG3608|consensus	467		99.71
KOG3576|consensus	267		99.69
KOG3623|consensus	1007		99.68
KOG1074|consensus	958		99.67
KOG1074|consensus	958		99.64
KOG3623|consensus	1007		99.59
KOG3576|consensus	267		99.58
KOG3608|consensus	467		99.55
PHA00733	128	hypothetical protein	99.41
PHA02768	55	hypothetical protein; Provisional	99.16
PLN03086	567	PRLI-interacting factor K; Provisional	99.11
PLN03086	567	PRLI-interacting factor K; Provisional	99.08
PHA00733	128	hypothetical protein	99.03
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.0
PHA02768	55	hypothetical protein; Provisional	98.91
KOG3993|consensus	500		98.66
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.65
KOG3993|consensus	500		98.62
PHA00616	44	hypothetical protein	98.57
PHA00732	79	hypothetical protein	98.5
PHA00616	44	hypothetical protein	98.36
PHA00732	79	hypothetical protein	98.31
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.3
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.2
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.08
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.02
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.94
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.92
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.91
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.84
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.61
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.57
smart00355	26	ZnF_C2H2 zinc finger.	97.46
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.43
PRK04860	160	hypothetical protein; Provisional	97.34
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.14
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.12
smart00355	26	ZnF_C2H2 zinc finger.	97.05
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.02
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.75
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.58
PRK04860	160	hypothetical protein; Provisional	96.49
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.26
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.08
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.03
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.12
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.05
KOG2231|consensus	669		94.57
COG5048	467	FOG: Zn-finger [General function prediction only]	94.24
KOG1146|consensus	1406		94.11
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.02
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.76
COG5048	467	FOG: Zn-finger [General function prediction only]	93.67
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	93.52
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.1
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.6
COG4049	65	Uncharacterized protein containing archaeal-type C	90.7
PF14446	54	Prok-RING_1: Prokaryotic RING finger family 1	90.11
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.99
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.3
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	89.17
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	89.0
KOG1146|consensus	1406		88.73
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	88.61
KOG2231|consensus	669		88.48
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	88.42
PHA00626	59	hypothetical protein	88.25
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	87.59
PF09845	131	DUF2072: Zn-ribbon containing protein (DUF2072); I	87.44
COG1198	730	PriA Primosomal protein N' (replication factor Y)	87.02
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	86.76
TIGR01384	104	TFS_arch transcription factor S, archaeal. There h	86.65
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	85.92
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	85.59
KOG2482|consensus	423		85.42
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	85.33
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	85.17
COG4049	65	Uncharacterized protein containing archaeal-type C	84.43
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.26
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	83.62
KOG2893|consensus	341		82.9
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	82.57
COG1592	166	Rubrerythrin [Energy production and conversion]	82.33
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	82.16
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	81.44
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	81.32
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	80.6

>KOG2462|consensus

Probab=99.95  E-value=2e-28  Score=188.46  Aligned_cols=116  Identities=24%  Similarity=0.362  Sum_probs=107.2

Q ss_pred             CCCCccccccccccccccccc---------------ccccccCcccCCCC-------CCCCcccccChhhhccCHHHHHh
Q psy7453          73 TQNHSLCKHCHSQLSHLDLLD---------------HCKTCSYMIRPNAN-------NTFSPFCIYCKAVLSTNLNELIE  130 (200)
Q Consensus        73 ~~~~~~C~~C~~~f~~~~~l~---------------~C~~C~~~f~~~~~-------~~~~~~C~~C~~~f~~~~~~l~~  130 (200)
                      ....|.|+.||+.+.+.++|.               .|++||+.|.....       ..-+++|.+|||.|+. .|-|+.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSR-PWLLQG  205 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSR-PWLLQG  205 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccc-hHHhhc
Confidence            344699999999999998873               79999999987654       5568999999999999 999999


Q ss_pred             chhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHh
Q psy7453         131 HCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       131 H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      |      + |+|+|||||.|+.|+++|.+.++|+.|+++|.+.|+|+|+.|+|+|+.++-|.+|.-
T Consensus       206 H------i-RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  206 H------I-RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             c------c-ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            9      9 999999999999999999999999999999999999999999999999999999974

>KOG2462|consensus

Probab=99.90  E-value=3.1e-24  Score=165.43  Aligned_cols=100  Identities=28%  Similarity=0.475  Sum_probs=93.0

Q ss_pred             cccccccccCcccCCCC------------CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccC
Q psy7453          91 LLDHCKTCSYMIRPNAN------------NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSY  158 (200)
Q Consensus        91 ~l~~C~~C~~~f~~~~~------------~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~  158 (200)
                      ..++|++||+.+.+.++            ..+-+.|++|||.|.+ ...|+.|      + ++|+  -+++|.+|||.|.
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvS-mpALkMH------i-rTH~--l~c~C~iCGKaFS  198 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVS-MPALKMH------I-RTHT--LPCECGICGKAFS  198 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeee-hHHHhhH------h-hccC--CCccccccccccc
Confidence            44689999999988774            4678999999999999 9999999      9 9998  4799999999999


Q ss_pred             ChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         159 NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       159 ~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +...|+-|+|+|+|||||.|+.|+|+|+.+++|+.||++|.+
T Consensus       199 RPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~  240 (279)
T KOG2462|consen  199 RPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSD  240 (279)
T ss_pred             chHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999975

>KOG3608|consensus

Probab=99.71  E-value=2.3e-18  Score=136.71  Aligned_cols=133  Identities=17%  Similarity=0.344  Sum_probs=99.7

Q ss_pred             cccchhhhhhhhhhhcCCCCCCCccccccccccccccccc--------------ccccccCcccCCCC-------CCCCc
Q psy7453          54 SLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLD--------------HCKTCSYMIRPNAN-------NTFSP  112 (200)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~--------------~C~~C~~~f~~~~~-------~~~~~  112 (200)
                      -++.++.|+.|.+.   |+++|...|+.||..|.++..|+              .|..|.+.|.+...       ....|
T Consensus       188 ~~~~k~~LreH~r~---Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~y  264 (467)
T KOG3608|consen  188 HMGNKYRLREHIRT---HSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCY  264 (467)
T ss_pred             hhccHHHHHHHHHh---cCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcc
Confidence            45677888888888   99999999999999999988773              68888888876543       34568


Q ss_pred             ccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc--CcccccCHHH
Q psy7453         113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ--CAFRSASVAG  190 (200)
Q Consensus       113 ~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~--C~k~f~~~~~  190 (200)
                      +|+.|+.+.+. .++|..|      ++-.|...|||+|+.|++.|.+.+.|++|..+|+ +-.|+|+.  |...|.+..+
T Consensus       265 kCplCdmtc~~-~ssL~~H------~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q  336 (467)
T KOG3608|consen  265 KCPLCDMTCSS-ASSLTTH------IRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQ  336 (467)
T ss_pred             cccccccCCCC-hHHHHHH------HHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHH
Confidence            88888888888 8888888      8667888888888888888888888888887776 33344444  4444444444


Q ss_pred             HHHHHhh
Q psy7453         191 LHYHLKK  197 (200)
Q Consensus       191 L~~H~~~  197 (200)
                      +++|++.
T Consensus       337 ~~~H~~e  343 (467)
T KOG3608|consen  337 MRRHFLE  343 (467)
T ss_pred             HHHHHHH
Confidence            4444443

>KOG3576|consensus

Probab=99.69  E-value=5.6e-18  Score=125.35  Aligned_cols=85  Identities=26%  Similarity=0.391  Sum_probs=76.4

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccC
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS  187 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~  187 (200)
                      +...|.|.+|+|.|.. ...|.+|      + +-|...+.+.|..||+.|...-+|++|+|+|+|.+||+|..|+|+|.+
T Consensus       114 d~d~ftCrvCgK~F~l-QRmlnrh------~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftq  185 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGL-QRMLNRH------L-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQ  185 (267)
T ss_pred             CCCeeeeehhhhhhhH-HHHHHHH------h-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHh
Confidence            5567899999999999 9999999      8 999988999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcC
Q psy7453         188 VAGLHYHLKKTYH  200 (200)
Q Consensus       188 ~~~L~~H~~~h~g  200 (200)
                      +.+|..|++..+|
T Consensus       186 rcsleshl~kvhg  198 (267)
T KOG3576|consen  186 RCSLESHLKKVHG  198 (267)
T ss_pred             hccHHHHHHHHcC
Confidence            9999999886554

>KOG3623|consensus

Probab=99.68  E-value=8e-18  Score=144.02  Aligned_cols=81  Identities=21%  Similarity=0.406  Sum_probs=78.1

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccC
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS  187 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~  187 (200)
                      .+..|.|+.|+|.|.- .+.|.+|      . -.|+|.+||+|.+|.|+|+.+..|..|+|.|.|||||+|+.|+|+|+.
T Consensus       891 e~gmyaCDqCDK~FqK-qSSLaRH------K-YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSH  962 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQK-QSSLARH------K-YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSH  962 (1007)
T ss_pred             ccccchHHHHHHHHHh-hHHHHHh------h-hhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhccc
Confidence            5578999999999999 9999999      8 999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHh
Q psy7453         188 VAGLHYHLK  196 (200)
Q Consensus       188 ~~~L~~H~~  196 (200)
                      ..+...||.
T Consensus       963 SGSYSQHMN  971 (1007)
T KOG3623|consen  963 SGSYSQHMN  971 (1007)
T ss_pred             ccchHhhhc
Confidence            999999984

>KOG1074|consensus

Probab=99.67  E-value=1.3e-17  Score=144.60  Aligned_cols=83  Identities=24%  Similarity=0.422  Sum_probs=75.9

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCC----CCcccc---cCc
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE----KPYACG---QCA  182 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~----k~~~C~---~C~  182 (200)
                      .|-+|.+|-++.+- ++.|+-|      . |+|+||+||+|.+||++|.++++|+.|+-+|...    -++.|+   +|.
T Consensus       604 dPNqCiiC~rVlSC-~saLqmH------y-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~  675 (958)
T KOG1074|consen  604 DPNQCIICLRVLSC-PSALQMH------Y-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQ  675 (958)
T ss_pred             Cccceeeeeecccc-hhhhhhh------h-hcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhc
Confidence            36789999999999 9999999      8 9999999999999999999999999999999654    348899   999


Q ss_pred             ccccCHHHHHHHHhhhcC
Q psy7453         183 FRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       183 k~f~~~~~L~~H~~~h~g  200 (200)
                      +.|...-.|..|+++|.|
T Consensus       676 ~kftn~V~lpQhIriH~~  693 (958)
T KOG1074|consen  676 KKFTNAVTLPQHIRIHLG  693 (958)
T ss_pred             ccccccccccceEEeecC
Confidence            999999999999999974

>KOG1074|consensus

Probab=99.64  E-value=9.9e-17  Score=139.22  Aligned_cols=53  Identities=28%  Similarity=0.528  Sum_probs=50.9

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..|.+||+.|...++|+.|+|+|+|+|||.|..|++.|..+.+|++||.+|.+
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccc
Confidence            58999999999999999999999999999999999999999999999999863

>KOG3623|consensus

Probab=99.59  E-value=1.2e-16  Score=136.91  Aligned_cols=114  Identities=23%  Similarity=0.394  Sum_probs=85.7

Q ss_pred             cccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhh---hcCC---CCCceec
Q psy7453          77 SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMI---RTDP---FRHKFVC  150 (200)
Q Consensus        77 ~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~---~~h~---~~k~~~C  150 (200)
                      ..|+.|++.+.....|.++    ..+. ....+..|.|..|..+|.. +..|.+|..+|+...   ..++   +-+.|+|
T Consensus       211 ltcpycdrgykrltslkeH----ikyr-hekne~nfsC~lCsytFAy-RtQLErhm~~hkpg~dqa~sltqsa~lRKFKC  284 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEH----IKYR-HEKNEPNFSCMLCSYTFAY-RTQLERHMQLHKPGGDQAISLTQSALLRKFKC  284 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHH----HHHH-HhhCCCCCcchhhhhhhhh-HHHHHHHHHhhcCCCcccccccchhhhccccc
Confidence            4566666666655555432    0111 1126678999999999999 999999944332220   0011   2357999


Q ss_pred             CccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHh
Q psy7453         151 YACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       151 ~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      ..|||+|+.+..|+.|+|+|.|||||.|+.|+|+|+...+...||-
T Consensus       285 tECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  285 TECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             cccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999999999999999999999999999999999999999999974

>KOG3576|consensus

Probab=99.58  E-value=3.3e-16  Score=115.99  Aligned_cols=113  Identities=21%  Similarity=0.439  Sum_probs=97.3

Q ss_pred             CCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecC
Q psy7453          72 PTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY  151 (200)
Q Consensus        72 ~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~  151 (200)
                      .+...|.|.+|++.|.....|.++-.|.       ...+.+-|..||+.|.. .-.|++|      + ++|+|.+||+|.
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch-------~~vkr~lct~cgkgfnd-tfdlkrh------~-rthtgvrpykc~  177 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCH-------SDVKRHLCTFCGKGFND-TFDLKRH------T-RTHTGVRPYKCS  177 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhc-------cHHHHHHHhhccCcccc-hhhhhhh------h-ccccCccccchh
Confidence            3456799999999999888886654443       34567899999999999 9999999      9 999999999999


Q ss_pred             ccCcccCChHHHHHHHH-HcC----------CCCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         152 ACDYFSYNIGCMRSHIR-THT----------GEKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       152 ~C~~~f~~~~~l~~H~~-~H~----------~~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      .|+++|...-+|..|.+ +|-          .+|.|.|+.||.+-.....+..|++.|+
T Consensus       178 ~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  178 LCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             hhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence            99999999999999976 452          2567999999999999999999998875

>KOG3608|consensus

Probab=99.55  E-value=3e-15  Score=119.21  Aligned_cols=137  Identities=22%  Similarity=0.331  Sum_probs=112.6

Q ss_pred             ccccchhhhhhhhhhhcCCCCCCCcccccccccccccccc----------cccccccCcccCCC----------CCCCCc
Q psy7453          53 MSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLL----------DHCKTCSYMIRPNA----------NNTFSP  112 (200)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l----------~~C~~C~~~f~~~~----------~~~~~~  112 (200)
                      .-|.++..|..|.+..+ .-...+|.|..|.|.|.+...|          |+|+.|+-.-...+          ...|||
T Consensus       215 ~~F~~~tkl~DH~rRqt-~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpf  293 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQT-ELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPF  293 (467)
T ss_pred             HHhccccHHHHHHHhhh-hhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCc
Confidence            34555666666766544 3456699999999999999888          58999986544332          268999


Q ss_pred             ccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc--cCcccCChHHHHHHHHH-cCCCC--CcccccCcccccC
Q psy7453         113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRT-HTGEK--PYACGQCAFRSAS  187 (200)
Q Consensus       113 ~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~-H~~~k--~~~C~~C~k~f~~  187 (200)
                      +|+.|++.|.+ .+.|.+|      . .+|+ +--|.|+.  |...|.....+++|++- |.|..  +|.|-.|++.|.+
T Consensus       294 KCd~Cd~~c~~-esdL~kH------~-~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~  364 (467)
T KOG3608|consen  294 KCDECDTRCVR-ESDLAKH------V-QVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTS  364 (467)
T ss_pred             cccchhhhhcc-HHHHHHH------H-Hhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhcc
Confidence            99999999999 9999999      8 8998 66799988  99999999999999885 55654  5999999999999


Q ss_pred             HHHHHHHHhhhc
Q psy7453         188 VAGLHYHLKKTY  199 (200)
Q Consensus       188 ~~~L~~H~~~h~  199 (200)
                      ..+|.+|+..-+
T Consensus       365 G~~L~~HL~kkH  376 (467)
T KOG3608|consen  365 GKSLSAHLMKKH  376 (467)
T ss_pred             chhHHHHHHHhh
Confidence            999999987644

>PHA00733 hypothetical protein

Probab=99.41  E-value=2.8e-13  Score=96.08  Aligned_cols=88  Identities=17%  Similarity=0.164  Sum_probs=67.1

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccC
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS  187 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~  187 (200)
                      .++++.|.+|++.|.. ...|..|......+ ..+ +++||.|+.||+.|.....|..|++.|  +.+|.|++|++.|..
T Consensus        37 ~~~~~~~~~~~~~~~~-~~~l~~~~~l~~~~-~~~-~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~  111 (128)
T PHA00733         37 EQKRLIRAVVKTLIYN-PQLLDESSYLYKLL-TSK-AVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRN  111 (128)
T ss_pred             hhhhHHHHHHhhhccC-hhhhcchHHHHhhc-ccC-CCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCC
Confidence            4566777777766666 55554442211114 444 478999999999999999999999987  467999999999999


Q ss_pred             HHHHHHHHhhhcC
Q psy7453         188 VAGLHYHLKKTYH  200 (200)
Q Consensus       188 ~~~L~~H~~~h~g  200 (200)
                      ...|..|+...+|
T Consensus       112 ~~sL~~H~~~~h~  124 (128)
T PHA00733        112 TDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999987664

>PHA02768 hypothetical protein; Provisional

Probab=99.16  E-value=1.4e-11  Score=73.12  Aligned_cols=42  Identities=19%  Similarity=0.346  Sum_probs=34.1

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHH
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGL  191 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L  191 (200)
                      |+|+.||+.|...++|..|+++|+  ++|+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            678888888888888888888887  688888888888876655

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.11  E-value=1.2e-10  Score=100.24  Aligned_cols=74  Identities=18%  Similarity=0.332  Sum_probs=32.3

Q ss_pred             ccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcc
Q psy7453          98 CSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA  177 (200)
Q Consensus        98 C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~  177 (200)
                      ||..|... ..+..+.|+.|++.|.  ...|..|      + .+|+  +|+.|+ ||+.+ ....|..|+++|.+++++.
T Consensus       441 Cg~v~~r~-el~~H~~C~~Cgk~f~--~s~LekH------~-~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~  506 (567)
T PLN03086        441 CGIVLRVE-EAKNHVHCEKCGQAFQ--QGEMEKH------M-KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLIT  506 (567)
T ss_pred             ccceeecc-ccccCccCCCCCCccc--hHHHHHH------H-HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCcee
Confidence            44444222 2334444555554442  2334444      4 3332  344444 44322 3344444444444444444


Q ss_pred             cccCcccc
Q psy7453         178 CGQCAFRS  185 (200)
Q Consensus       178 C~~C~k~f  185 (200)
                      |+.|++.|
T Consensus       507 C~fC~~~v  514 (567)
T PLN03086        507 CRFCGDMV  514 (567)
T ss_pred             CCCCCCcc
Confidence            44444444

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.08  E-value=1.9e-10  Score=98.95  Aligned_cols=111  Identities=18%  Similarity=0.349  Sum_probs=87.8

Q ss_pred             CCccccc--ccccccccc--cccccccccCcccCCCC------CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCC
Q psy7453          75 NHSLCKH--CHSQLSHLD--LLDHCKTCSYMIRPNAN------NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF  144 (200)
Q Consensus        75 ~~~~C~~--C~~~f~~~~--~l~~C~~C~~~f~~~~~------~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~  144 (200)
                      ..-.|+.  |+..|....  ....|+.|++.|.....      -.+++.|+ ||+.+ . +..|..|      + .+|.+
T Consensus       432 ~~V~Cp~~~Cg~v~~r~el~~H~~C~~Cgk~f~~s~LekH~~~~Hkpv~Cp-Cg~~~-~-R~~L~~H------~-~thCp  501 (567)
T PLN03086        432 HNVVCPHDGCGIVLRVEEAKNHVHCEKCGQAFQQGEMEKHMKVFHEPLQCP-CGVVL-E-KEQMVQH------Q-ASTCP  501 (567)
T ss_pred             cceeCCcccccceeeccccccCccCCCCCCccchHHHHHHHHhcCCCccCC-CCCCc-c-hhHHHhh------h-hccCC
Confidence            4456874  999886543  22479999998863211      23789999 99755 6 7899999      8 99999


Q ss_pred             CCceecCccCcccC----------ChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhh
Q psy7453         145 RHKFVCYACDYFSY----------NIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       145 ~k~~~C~~C~~~f~----------~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      ++++.|+.|++.|.          ..+.|..|..++ |.+++.|..||+.+..+ .|..|+..
T Consensus       502 ~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        502 LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             CCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHH
Confidence            99999999999995          245899999986 99999999999999887 56678754

>PHA00733 hypothetical protein

Probab=99.03  E-value=1.9e-10  Score=81.56  Aligned_cols=90  Identities=19%  Similarity=0.237  Sum_probs=70.0

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      ..+++++.|.+|++.|.....|..-..=-+  .....+++||.|+.|++.|.+ ...|..|      + +.|  +.+|.|
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~kPy~C~~Cgk~Fss-~s~L~~H------~-r~h--~~~~~C  102 (128)
T PHA00733         35 TPEQKRLIRAVVKTLIYNPQLLDESSYLYK--LLTSKAVSPYVCPLCLMPFSS-SVSLKQH------I-RYT--EHSKVC  102 (128)
T ss_pred             ChhhhhHHHHHHhhhccChhhhcchHHHHh--hcccCCCCCccCCCCCCcCCC-HHHHHHH------H-hcC--CcCccC
Confidence            345788999999999998877743100000  012235789999999999999 9999999      8 766  457999


Q ss_pred             CccCcccCChHHHHHHHHHcCC
Q psy7453         151 YACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       151 ~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      +.|++.|.....|..|++...+
T Consensus       103 ~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        103 PVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCHHHHHHHHHHhcC
Confidence            9999999999999999886543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.00  E-value=2.4e-10  Score=58.15  Aligned_cols=26  Identities=50%  Similarity=0.948  Sum_probs=20.9

Q ss_pred             HHHHHHHHcCCCCCcccccCcccccC
Q psy7453         162 CMRSHIRTHTGEKPYACGQCAFRSAS  187 (200)
Q Consensus       162 ~l~~H~~~H~~~k~~~C~~C~k~f~~  187 (200)
                      +|.+|+++|+|++||+|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888888888888888888863

...

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=3.4e-10  Score=67.20  Aligned_cols=43  Identities=19%  Similarity=0.355  Sum_probs=39.4

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHH
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCM  163 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l  163 (200)
                      -|+|+.||+.|+. .++|..|      + ++|+  ++++|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~-~~~L~~H------~-r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIK-RKSMITH------L-RKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeecc-HHHHHHH------H-HhcC--CcccCCcccceeccccee
Confidence            4899999999999 9999999      9 9998  799999999999987765

>KOG3993|consensus

Probab=98.66  E-value=7.8e-09  Score=84.66  Aligned_cols=82  Identities=21%  Similarity=0.267  Sum_probs=66.2

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCC--------C--------
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG--------E--------  173 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~--------~--------  173 (200)
                      ..|.|..|...|.+ .-.|.+|      . =.-.-.--|+|+.|+|.|+...+|..|.|.|..        .        
T Consensus       266 GdyiCqLCK~kYeD-~F~LAQH------r-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~  337 (500)
T KOG3993|consen  266 GDYICQLCKEKYED-AFALAQH------R-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVE  337 (500)
T ss_pred             HHHHHHHHHHhhhh-HHHHhhc------c-CCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhh
Confidence            35899999999999 9999999      3 111112248999999999999999999998842        1        


Q ss_pred             -----------------CCcccccCcccccCHHHHHHHHhhhc
Q psy7453         174 -----------------KPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       174 -----------------k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                                       --|.|..|+|.|.+...|+.|+-+|+
T Consensus       338 ~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  338 TRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence                             13899999999999999999988774

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.65  E-value=1.2e-08  Score=51.83  Aligned_cols=26  Identities=31%  Similarity=0.405  Sum_probs=23.7

Q ss_pred             HHHhchhhhhhhhhcCCCCCceecCccCcccCC
Q psy7453         127 ELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYN  159 (200)
Q Consensus       127 ~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~  159 (200)
                      +|.+|      + ++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H------~-~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRH------M-RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHH------H-HHHSSSSSEEESSSSEEESS
T ss_pred             CHHHH------h-hhcCCCCCCCCCCCcCeeCc
Confidence            58899      9 99999999999999999974

...

>KOG3993|consensus

Probab=98.62  E-value=8.1e-09  Score=84.57  Aligned_cols=88  Identities=23%  Similarity=0.338  Sum_probs=62.6

Q ss_pred             CcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhh------------h---
Q psy7453          76 HSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMI------------R---  140 (200)
Q Consensus        76 ~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~------------~---  140 (200)
                      -|.|..|...|.+.-.|.++ .|...      --..|+|++|+|.|+- ..+|..|||-|+-..            +   
T Consensus       267 dyiCqLCK~kYeD~F~LAQH-rC~RI------V~vEYrCPEC~KVFsC-PANLASHRRWHKPR~eaa~a~~~P~k~~~~~  338 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQH-RCPRI------VHVEYRCPECDKVFSC-PANLASHRRWHKPRPEAAKAGSPPPKQAVET  338 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhc-cCCee------EEeeecCCcccccccC-chhhhhhhcccCCchhhhhcCCCChhhhhhh
Confidence            38899999988888777542 12211      2246899999999999 999999988882110            0   


Q ss_pred             -----------cCCCCCceecCccCcccCChHHHHHHHHHcC
Q psy7453         141 -----------TDPFRHKFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       141 -----------~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                                 ....+.-|.|..|++.|.+...|+.|+.+|.
T Consensus       339 rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  339 RAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence                       0012235899999999999999999987763

>PHA00616 hypothetical protein

Probab=98.57  E-value=3e-08  Score=56.13  Aligned_cols=33  Identities=9%  Similarity=0.163  Sum_probs=19.4

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      ||+|+.||+.|...+.|.+|++.|+|++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            455666666666666666666666666555554

>PHA00732 hypothetical protein

Probab=98.50  E-value=8.3e-08  Score=62.12  Aligned_cols=48  Identities=21%  Similarity=0.296  Sum_probs=33.9

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhh-cCCCCCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIR-TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~-~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      ||.|+.|++.|.+ ...|..|      + + .|.+   +.|+.||+.|.   .+..|++++.+
T Consensus         1 py~C~~Cgk~F~s-~s~Lk~H------~-r~~H~~---~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVT-LFALKQH------A-RRNHTL---TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCC-HHHHHHH------h-hcccCC---CccCCCCCEeC---ChhhhhcccCC
Confidence            5778888888888 8888888      7 5 3543   46888888887   46677765543

>PHA00616 hypothetical protein

Probab=98.36  E-value=1.6e-07  Score=53.13  Aligned_cols=39  Identities=18%  Similarity=0.286  Sum_probs=34.2

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCccc
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS  157 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f  157 (200)
                      ||+|+.||+.|.. ++.|..|      + +.|++++++.|+.--..|
T Consensus         1 pYqC~~CG~~F~~-~s~l~~H------~-r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRK-KKEVIEH------L-LSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhh-HHHHHHH------H-HHhcCCCccceeEEEEEE
Confidence            6899999999999 9999999      9 999999999998643333

>PHA00732 hypothetical protein

Probab=98.31  E-value=4.1e-07  Score=58.89  Aligned_cols=46  Identities=24%  Similarity=0.488  Sum_probs=39.0

Q ss_pred             ceecCccCcccCChHHHHHHHHH-cCCCCCcccccCcccccCHHHHHHHHhhh
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRT-HTGEKPYACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      ||.|+.||+.|...+.|+.|++. |.   ++.|+.||+.|.+   |..|.+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~---l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR---LNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC---hhhhhccc
Confidence            68899999999999999999984 65   3689999999984   77787653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.30  E-value=1.3e-06  Score=52.47  Aligned_cols=51  Identities=25%  Similarity=0.497  Sum_probs=33.5

Q ss_pred             ceecCccCcccCChHHHHHHHHH-cCCC-CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRT-HTGE-KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|.|+.|++ -.+...|..|... |.++ +.+.|++|...+.  .+|..|+..++|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            367777777 4455677777654 5544 4577888877544  377778777654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.20  E-value=1e-06  Score=43.26  Aligned_cols=23  Identities=26%  Similarity=0.593  Sum_probs=14.7

Q ss_pred             cccccCcccccCHHHHHHHHhhh
Q psy7453         176 YACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      |+|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.08  E-value=4.5e-06  Score=50.09  Aligned_cols=51  Identities=22%  Similarity=0.340  Sum_probs=40.7

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhhcCCCC-CceecCccCcccCChHHHHHHHHHcC
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR-HKFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~-k~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      .|.|++|++ ..+ ...|..|      ....|..+ +.+.|++|...+.  .+|..|+..+.
T Consensus         2 ~f~CP~C~~-~~~-~~~L~~H------~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFS-ESSLVEH------CEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccC-HHHHHHH------HHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            589999999 455 6889999      86777764 5799999998655  48999988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.02  E-value=4.9e-06  Score=40.71  Aligned_cols=23  Identities=22%  Similarity=0.504  Sum_probs=16.3

Q ss_pred             eecCccCcccCChHHHHHHHHHc
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      |+|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.94  E-value=7e-06  Score=40.31  Aligned_cols=24  Identities=21%  Similarity=0.429  Sum_probs=14.3

Q ss_pred             cccccCcccccCHHHHHHHHhhhc
Q psy7453         176 YACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666653

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.92  E-value=6.8e-06  Score=41.90  Aligned_cols=25  Identities=24%  Similarity=0.616  Sum_probs=17.0

Q ss_pred             CcccccCcccccCHHHHHHHHhhhc
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      ||.|+.|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.91  E-value=7.7e-06  Score=55.07  Aligned_cols=73  Identities=18%  Similarity=0.457  Sum_probs=17.5

Q ss_pred             ccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHH
Q psy7453         113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH  192 (200)
Q Consensus       113 ~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~  192 (200)
                      +|..|+..|.+ ...|..|      +...|.-.-+     ....+.....+..+.+.-. ...+.|..|++.|.+...|.
T Consensus         1 ~C~~C~~~f~~-~~~l~~H------~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~   67 (100)
T PF12756_consen    1 QCLFCDESFSS-VDDLLQH------MKKKHGFDIP-----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQ   67 (100)
T ss_dssp             -------------------------------------------------------------SSEEBSSSS-EESSHHHHH
T ss_pred             Ccccccccccc-ccccccc------cccccccccc-----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHH
Confidence            48889999988 8889999      7444432221     1112223333333333211 22577777777777777777


Q ss_pred             HHHhhh
Q psy7453         193 YHLKKT  198 (200)
Q Consensus       193 ~H~~~h  198 (200)
                      .|++.+
T Consensus        68 ~Hm~~~   73 (100)
T PF12756_consen   68 EHMRSK   73 (100)
T ss_dssp             HHHHHT
T ss_pred             HHHcCc
Confidence            777753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.84  E-value=2.3e-06  Score=68.08  Aligned_cols=71  Identities=24%  Similarity=0.354  Sum_probs=45.4

Q ss_pred             CCCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCcee--cCccCcccCChHHHHHHHHHcCCCCCcccccCcc
Q psy7453         108 NTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV--CYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF  183 (200)
Q Consensus       108 ~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~--C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k  183 (200)
                      ++|||+|++  |.|.+.. ...|+-|      +..-|...+...  -++=-..|            -..+|||.|++|+|
T Consensus       346 d~KpykCpV~gC~K~Ykn-qnGLKYH------~lhGH~~~~~~~~p~p~~~~~F------------~~~~KPYrCevC~K  406 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKN-QNGLKYH------MLHGHQNQKLHENPSPEKMNIF------------SAKDKPYRCEVCDK  406 (423)
T ss_pred             cCceecCCCCCchhhhcc-ccchhhh------hhccccCcccCCCCCccccccc------------cccCCceeccccch
Confidence            458888876  8888888 8888888      422222211111  11111122            23469999999999


Q ss_pred             cccCHHHHHHHHhh
Q psy7453         184 RSASVAGLHYHLKK  197 (200)
Q Consensus       184 ~f~~~~~L~~H~~~  197 (200)
                      .|+...+|+.|+.-
T Consensus       407 RYKNlNGLKYHr~H  420 (423)
T COG5189         407 RYKNLNGLKYHRKH  420 (423)
T ss_pred             hhccCccceecccc
Confidence            99999999999753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.61  E-value=7.1e-05  Score=36.56  Aligned_cols=23  Identities=35%  Similarity=0.592  Sum_probs=15.8

Q ss_pred             eecCccCcccCChHHHHHHHHHc
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56777777777777777777765

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.57  E-value=4.7e-05  Score=38.67  Aligned_cols=25  Identities=28%  Similarity=0.583  Sum_probs=16.3

Q ss_pred             ceecCccCcccCChHHHHHHHHHcC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4666666666766666666666553

>smart00355 ZnF_C2H2 zinc finger

Probab=97.46  E-value=0.00011  Score=36.44  Aligned_cols=23  Identities=26%  Similarity=0.546  Sum_probs=15.0

Q ss_pred             cccccCcccccCHHHHHHHHhhh
Q psy7453         176 YACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45666666666666666666654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.43  E-value=5.5e-05  Score=60.45  Aligned_cols=58  Identities=17%  Similarity=0.222  Sum_probs=40.6

Q ss_pred             CCCCccccc--ccccccccccccccccccC---cccCC---------CCCCCCcccccChhhhccCHHHHHhc
Q psy7453          73 TQNHSLCKH--CHSQLSHLDLLDHCKTCSY---MIRPN---------ANNTFSPFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus        73 ~~~~~~C~~--C~~~f~~~~~l~~C~~C~~---~f~~~---------~~~~~~~~C~~C~~~f~~~~~~l~~H  131 (200)
                      +++||+|++  |.|.+.+...|.-+..-|.   .....         ....|||+|++|+|++.. ...|+-|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKN-lNGLKYH  417 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKN-LNGLKYH  417 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhcc-Cccceec
Confidence            469999987  9999999887752222221   11110         115689999999999998 8888888

>PRK04860 hypothetical protein; Provisional

Probab=97.34  E-value=0.00014  Score=53.51  Aligned_cols=37  Identities=27%  Similarity=0.524  Sum_probs=25.0

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSAS  187 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~  187 (200)
                      +|.|. |+.   ....+++|.++|+|+++|.|..|++.|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            57776 765   55566677777777777777777766654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.14  E-value=0.00065  Score=39.45  Aligned_cols=33  Identities=18%  Similarity=0.287  Sum_probs=18.8

Q ss_pred             CCCCceecCccCcccCChHHHHHHHHHcCCCCC
Q psy7453         143 PFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  175 (200)
Q Consensus       143 ~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~  175 (200)
                      ..+.|-.|++|+..+....+|++|+.++.+.||
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            456677777777777777777777766655554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.12  E-value=0.00036  Score=34.33  Aligned_cols=24  Identities=29%  Similarity=0.743  Sum_probs=15.1

Q ss_pred             cccccCcccccCHHHHHHHHhhhcC
Q psy7453         176 YACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+|+.|+.... ...|..|++.|+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777777766 6677777777654

>smart00355 ZnF_C2H2 zinc finger

Probab=97.05  E-value=0.00063  Score=33.54  Aligned_cols=24  Identities=25%  Similarity=0.552  Sum_probs=14.7

Q ss_pred             eecCccCcccCChHHHHHHHHHcC
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            356666666666666666666553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.02  E-value=0.00064  Score=39.49  Aligned_cols=30  Identities=23%  Similarity=0.370  Sum_probs=22.0

Q ss_pred             CCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         171 TGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       171 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..+.|-.|++|+..+.+..+|++|+.+++|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            456889999999999999999999988764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.75  E-value=0.001  Score=32.93  Aligned_cols=22  Identities=27%  Similarity=0.526  Sum_probs=14.6

Q ss_pred             cccccCcccccCHHHHHHHHhh
Q psy7453         176 YACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      |.|++|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566677777777777766654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.58  E-value=0.0016  Score=32.24  Aligned_cols=23  Identities=26%  Similarity=0.579  Sum_probs=16.8

Q ss_pred             eecCccCcccCChHHHHHHHHHc
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      |.|++|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56777777777777777777643

>PRK04860 hypothetical protein; Provisional

Probab=96.49  E-value=0.0011  Score=48.71  Aligned_cols=39  Identities=18%  Similarity=0.226  Sum_probs=34.1

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCCh
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNI  160 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~  160 (200)
                      -+|.|. |+.   . ...+.+|      . ++|+++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~-~~~~rrH------~-ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---H-QLTVRRH------N-RVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---e-eCHHHHH------H-HHhcCCccEECCCCCceeEEe
Confidence            579998 998   5 6779999      8 999999999999999988654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.26  E-value=0.0043  Score=41.40  Aligned_cols=73  Identities=19%  Similarity=0.292  Sum_probs=21.0

Q ss_pred             ccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCccc
Q psy7453          78 LCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS  157 (200)
Q Consensus        78 ~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f  157 (200)
                      .|..|+..|.+...|..+-.      ..+.    +..+ ....+.. ...+..+      . +... ...+.|..|++.|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~------~~H~----~~~~-~~~~l~~-~~~~~~~------~-~~~~-~~~~~C~~C~~~f   60 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMK------KKHG----FDIP-DQKYLVD-PNRLLNY------L-RKKV-KESFRCPYCNKTF   60 (100)
T ss_dssp             --------------------------------------------------------------------SSEEBSSSS-EE
T ss_pred             Cccccccccccccccccccc------cccc----cccc-ccccccc-ccccccc------c-cccc-CCCCCCCccCCCC
Confidence            48888888888877765321      1111    1111 1112223 4444444      3 3222 2368999999999


Q ss_pred             CChHHHHHHHHHc
Q psy7453         158 YNIGCMRSHIRTH  170 (200)
Q Consensus       158 ~~~~~l~~H~~~H  170 (200)
                      .+...|..|++.+
T Consensus        61 ~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   61 RSREALQEHMRSK   73 (100)
T ss_dssp             SSHHHHHHHHHHT
T ss_pred             cCHHHHHHHHcCc
Confidence            9999999999874

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.08  E-value=0.0061  Score=29.78  Aligned_cols=23  Identities=22%  Similarity=0.673  Sum_probs=16.8

Q ss_pred             eecCccCcccCChHHHHHHHHHcC
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |+|+.|+.... ...|.+|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            67888888887 888888888753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.03  E-value=0.0028  Score=32.07  Aligned_cols=22  Identities=27%  Similarity=0.496  Sum_probs=15.6

Q ss_pred             cccccCcccccCHHHHHHHHhh
Q psy7453         176 YACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      |-|+.|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.12  E-value=0.015  Score=29.28  Aligned_cols=19  Identities=32%  Similarity=0.620  Sum_probs=14.1

Q ss_pred             cccccChhhhccCHHHHHhc
Q psy7453         112 PFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       112 ~~C~~C~~~f~~~~~~l~~H  131 (200)
                      |.|..|++.|.+ ...+..|
T Consensus         2 ~~C~~C~k~f~~-~~~~~~H   20 (27)
T PF12171_consen    2 FYCDACDKYFSS-ENQLKQH   20 (27)
T ss_dssp             CBBTTTTBBBSS-HHHHHCC
T ss_pred             CCcccCCCCcCC-HHHHHHH
Confidence            567777777777 7777777

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.05  E-value=0.021  Score=28.30  Aligned_cols=19  Identities=26%  Similarity=0.413  Sum_probs=10.4

Q ss_pred             ccccCcccccCHHHHHHHHh
Q psy7453         177 ACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       177 ~C~~C~k~f~~~~~L~~H~~  196 (200)
                      +|+.||+.| ....|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            456666666 4445555554

>KOG2231|consensus

Probab=94.57  E-value=0.032  Score=49.64  Aligned_cols=22  Identities=23%  Similarity=0.597  Sum_probs=13.3

Q ss_pred             cccccccccccccccccccccc
Q psy7453          77 SLCKHCHSQLSHLDLLDHCKTC   98 (200)
Q Consensus        77 ~~C~~C~~~f~~~~~l~~C~~C   98 (200)
                      +.|..|+..|.....-..|..|
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c  121 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHC  121 (669)
T ss_pred             hhcCccccchhhhcccCCCccc
Confidence            5677887777544444445555

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.24  E-value=0.012  Score=49.43  Aligned_cols=63  Identities=21%  Similarity=0.292  Sum_probs=55.3

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhh--cCCCC--CceecC--ccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIR--TDPFR--HKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~--~h~~~--k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      .++.|..|...|.. ...|..|      . +  .|.++  +++.|+  .|++.|.....+..|..+|.+.+++.+..
T Consensus       288 ~~~~~~~~~~~~s~-~~~l~~~------~-~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         288 LPIKSKQCNISFSR-SSPLTRH------L-RSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             cCCCCccccCCccc-ccccccc------c-cccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            47889999999999 9999999      8 7  79999  999999  79999999999999999998888777644

>KOG1146|consensus

Probab=94.11  E-value=0.029  Score=53.09  Aligned_cols=25  Identities=32%  Similarity=0.820  Sum_probs=22.2

Q ss_pred             CCCcccccCcccccCHHHHHHHHhh
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      .++|.|..|..++..+.+|..|++.
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHH
Confidence            3689999999999999999999874

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.02  E-value=0.056  Score=26.76  Aligned_cols=19  Identities=21%  Similarity=0.315  Sum_probs=10.6

Q ss_pred             ecCccCcccCChHHHHHHHH
Q psy7453         149 VCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       149 ~C~~C~~~f~~~~~l~~H~~  168 (200)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 4455555543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.76  E-value=0.052  Score=28.89  Aligned_cols=22  Identities=23%  Similarity=0.462  Sum_probs=15.1

Q ss_pred             CcccccCcccccCHHHHHHHHh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      +|-|++|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.67  E-value=0.011  Score=49.50  Aligned_cols=55  Identities=22%  Similarity=0.382  Sum_probs=51.3

Q ss_pred             CceecCccCcccCChHHHHHHHH--HcCCC--CCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIR--THTGE--KPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~--~H~~~--k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .++.|..|...|.....+..|.+  .|+++  +++.|+  .|++.|.+...+..|..+|++
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  348 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS  348 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccC
Confidence            46899999999999999999999  89999  999999  799999999999999988764

>TIGR00622 ssl1 transcription factor ssl1

Probab=93.52  E-value=0.078  Score=36.46  Aligned_cols=79  Identities=13%  Similarity=0.139  Sum_probs=46.5

Q ss_pred             CCCcccccChhhhccCHHHHHhchhhhhhhhhcCC-CCC------------ceecCccCcccCChHHHHHHHHHcCCCCC
Q psy7453         109 TFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDP-FRH------------KFVCYACDYFSYNIGCMRSHIRTHTGEKP  175 (200)
Q Consensus       109 ~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~-~~k------------~~~C~~C~~~f~~~~~l~~H~~~H~~~k~  175 (200)
                      +-|..|+.||-+... ...|.+-      .  -|. .-+            .-.|-.|+..|........-  .-.....
T Consensus        13 ~LP~~CpiCgLtLVs-s~HLARS------y--HHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~--~~~~~~~   81 (112)
T TIGR00622        13 ELPVECPICGLTLIL-STHLARS------Y--HHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFD--ELKDSHR   81 (112)
T ss_pred             CCCCcCCcCCCEEec-cchHHHh------h--hccCCCcccccccccccCCCCcccCcCCCCCCccccccc--ccccccc
Confidence            346778888887777 7777653      1  111 011            12388888888754311100  0122346


Q ss_pred             cccccCcccccCHHHHHHHHhhh
Q psy7453         176 YACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      |+|+.|...|--....-.|...|
T Consensus        82 y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        82 YVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             eeCCCCCCccccccchhhhhhcc
Confidence            88888888888777777776655

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.10  E-value=0.08  Score=28.13  Aligned_cols=23  Identities=17%  Similarity=0.397  Sum_probs=17.6

Q ss_pred             ceecCccCcccCChHHHHHHHHH
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      +|.|+.|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47788888888888888887653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.60  E-value=0.078  Score=28.11  Aligned_cols=24  Identities=29%  Similarity=0.820  Sum_probs=16.4

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCCCcccccCcc
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF  183 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k  183 (200)
                      |.|..||..+....            .++.|++||.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            67888887665332            5778888874

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.70  E-value=0.12  Score=30.66  Aligned_cols=29  Identities=10%  Similarity=0.075  Sum_probs=21.0

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHH
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      .-.||--+.|+-||..|....++.+|...
T Consensus        11 ~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          11 DRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             ccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            34566677888888888877777777654

>PF14446 Prok-RING_1: Prokaryotic RING finger family 1

Probab=90.11  E-value=0.13  Score=30.48  Aligned_cols=28  Identities=18%  Similarity=0.387  Sum_probs=24.1

Q ss_pred             cccccccccccccccccccccccCcccC
Q psy7453          77 SLCKHCHSQLSHLDLLDHCKTCSYMIRP  104 (200)
Q Consensus        77 ~~C~~C~~~f~~~~~l~~C~~C~~~f~~  104 (200)
                      ..|+.|++.|....++..|+.|+..+.+
T Consensus         6 ~~C~~Cg~~~~~~dDiVvCp~CgapyHR   33 (54)
T PF14446_consen    6 CKCPVCGKKFKDGDDIVVCPECGAPYHR   33 (54)
T ss_pred             ccChhhCCcccCCCCEEECCCCCCcccH
Confidence            4699999999988999999999987764

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.99  E-value=0.18  Score=34.60  Aligned_cols=28  Identities=18%  Similarity=0.377  Sum_probs=16.4

Q ss_pred             ccccccCcccCCCCCCCCcccccChhhhcc
Q psy7453          94 HCKTCSYMIRPNANNTFSPFCIYCKAVLST  123 (200)
Q Consensus        94 ~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~  123 (200)
                      .|+.||..|...  +..|..|+.||..|.-
T Consensus        11 ~Cp~CG~kFYDL--nk~PivCP~CG~~~~~   38 (108)
T PF09538_consen   11 TCPSCGAKFYDL--NKDPIVCPKCGTEFPP   38 (108)
T ss_pred             cCCCCcchhccC--CCCCccCCCCCCccCc
Confidence            455555555432  2356667777777766

The function of members of this family is unknown.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.30  E-value=0.2  Score=26.73  Aligned_cols=9  Identities=33%  Similarity=0.652  Sum_probs=4.8

Q ss_pred             CcccccChh
Q psy7453         111 SPFCIYCKA  119 (200)
Q Consensus       111 ~~~C~~C~~  119 (200)
                      |..|++|+.
T Consensus        18 p~~CP~Cg~   26 (34)
T cd00729          18 PEKCPICGA   26 (34)
T ss_pred             CCcCcCCCC
Confidence            445555554

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=89.17  E-value=0.31  Score=26.52  Aligned_cols=32  Identities=16%  Similarity=0.298  Sum_probs=16.9

Q ss_pred             ecCccCcccCChHHHHHHHHHcCCCCCcccccCcccc
Q psy7453         149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS  185 (200)
Q Consensus       149 ~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f  185 (200)
                      .|+.|+..|.-..+     ++-.+....+|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDD-----KLPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHH-----HcccCCcEEECCCCCcEe
Confidence            46666666654443     122333456666666555

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=89.00  E-value=0.25  Score=24.67  Aligned_cols=22  Identities=23%  Similarity=0.791  Sum_probs=10.4

Q ss_pred             cccccccccccccccccccccCcc
Q psy7453          79 CKHCHSQLSHLDLLDHCKTCSYMI  102 (200)
Q Consensus        79 C~~C~~~f~~~~~l~~C~~C~~~f  102 (200)
                      |+.|+......  ...|+.||..|
T Consensus         3 CP~C~~~V~~~--~~~Cp~CG~~F   24 (26)
T PF10571_consen    3 CPECGAEVPES--AKFCPHCGYDF   24 (26)
T ss_pred             CCCCcCCchhh--cCcCCCCCCCC
Confidence            55555544222  23455555554

Several members are annotated as putative helicases.

>KOG1146|consensus

Probab=88.73  E-value=0.083  Score=50.15  Aligned_cols=73  Identities=15%  Similarity=0.280  Sum_probs=38.5

Q ss_pred             cccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHH-----------------cCCCC
Q psy7453         112 PFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT-----------------HTGEK  174 (200)
Q Consensus       112 ~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~-----------------H~~~k  174 (200)
                      +.|..|++.|.. .-.+. |      +    ....+|.|..|...|...+.|..|.+.                 +....
T Consensus      1261 ~~c~~~~~~~~~-~~~~~-~------l----~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~ 1328 (1406)
T KOG1146|consen 1261 GECGAVDELLTP-SFGIS-T------L----DVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCT 1328 (1406)
T ss_pred             chhhhccccccC-cccee-e------c----ccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccc
Confidence            445555555555 43333 3      3    123345555555555555555555431                 11123


Q ss_pred             CcccccCcccccCHHHHHHHHhh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      .| |..|...|.....|..|+++
T Consensus      1329 ~~-c~~c~~~~~~~~alqihm~~ 1350 (1406)
T KOG1146|consen 1329 YH-CLACEVLLSGREALQIHMRS 1350 (1406)
T ss_pred             cc-chHHHhhcchhHHHHHHHHH
Confidence            35 77777777777777777665

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=88.61  E-value=0.34  Score=26.32  Aligned_cols=33  Identities=15%  Similarity=0.302  Sum_probs=16.1

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCCCcccccCcccc
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS  185 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f  185 (200)
                      +.|+.|+..|.-.....     ..+.....|+.|+..|
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~v~C~~C~~~~   35 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGKVRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCEEECCCCCCEE
Confidence            45666666665444321     1112235566666555

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2231|consensus

Probab=88.48  E-value=0.78  Score=41.18  Aligned_cols=34  Identities=24%  Similarity=0.583  Sum_probs=23.4

Q ss_pred             cccccccCcccCCCCCCCCcccccChhhhccCHHHHHhc
Q psy7453          93 DHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus        93 ~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H  131 (200)
                      ..|.+|+..|.....+   -.|..| -.|.+ ...|++|
T Consensus       100 ~~C~~C~~~~~~~~~~---~~~~~c-~~~~s-~~~Lk~H  133 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNK---KECLHC-TEFKS-VENLKNH  133 (669)
T ss_pred             hhcCccccchhhhccc---CCCccc-cchhH-HHHHHHH
Confidence            3799999888644322   236677 67777 7778888

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=88.42  E-value=0.47  Score=28.59  Aligned_cols=8  Identities=25%  Similarity=1.003  Sum_probs=4.3

Q ss_pred             ceecCccC
Q psy7453         147 KFVCYACD  154 (200)
Q Consensus       147 ~~~C~~C~  154 (200)
                      +|.|+.||
T Consensus        48 ~Y~CP~CG   55 (59)
T PRK14890         48 PYTCPKCG   55 (59)
T ss_pred             ceECCCCC
Confidence            45555554

>PHA00626 hypothetical protein

Probab=88.25  E-value=0.21  Score=29.64  Aligned_cols=13  Identities=23%  Similarity=0.243  Sum_probs=7.3

Q ss_pred             CcccccChhhhcc
Q psy7453         111 SPFCIYCKAVLST  123 (200)
Q Consensus       111 ~~~C~~C~~~f~~  123 (200)
                      .|.|+.||..|+.
T Consensus        23 rYkCkdCGY~ft~   35 (59)
T PHA00626         23 DYVCCDCGYNDSK   35 (59)
T ss_pred             ceEcCCCCCeech
Confidence            4556666655543

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=87.59  E-value=0.27  Score=28.12  Aligned_cols=26  Identities=19%  Similarity=0.498  Sum_probs=12.9

Q ss_pred             Cccccccccccccccc--ccccccccCc
Q psy7453          76 HSLCKHCHSQLSHLDL--LDHCKTCSYM  101 (200)
Q Consensus        76 ~~~C~~C~~~f~~~~~--l~~C~~C~~~  101 (200)
                      .|.|+.||..|.....  ..+|+.||..
T Consensus         3 ~y~C~~CG~~~~~~~~~~~~~Cp~CG~~   30 (46)
T PRK00398          3 EYKCARCGREVELDEYGTGVRCPYCGYR   30 (46)
T ss_pred             EEECCCCCCEEEECCCCCceECCCCCCe
Confidence            3566666665543322  2345555443

>PF09845 DUF2072: Zn-ribbon containing protein (DUF2072); InterPro: IPR018645 This archaeal Zinc-ribbon containing proteins have no known function

Probab=87.44  E-value=0.27  Score=34.69  Aligned_cols=26  Identities=19%  Similarity=0.498  Sum_probs=21.5

Q ss_pred             Ccccccccccccccc--cccccccccCc
Q psy7453          76 HSLCKHCHSQLSHLD--LLDHCKTCSYM  101 (200)
Q Consensus        76 ~~~C~~C~~~f~~~~--~l~~C~~C~~~  101 (200)
                      |+.|..||+.|.+-+  .|.-|+.||-.
T Consensus         1 PH~Ct~Cg~~f~dgs~eil~GCP~CGg~   28 (131)
T PF09845_consen    1 PHQCTKCGRVFEDGSKEILSGCPECGGN   28 (131)
T ss_pred             CcccCcCCCCcCCCcHHHHccCcccCCc
Confidence            678999999999865  56789999843

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=87.02  E-value=0.53  Score=42.95  Aligned_cols=48  Identities=27%  Similarity=0.738  Sum_probs=29.4

Q ss_pred             ccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453          94 HCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus        94 ~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      .|..||..+          +|+.|+..+..       |      +     ..+...|..||.               ...
T Consensus       437 ~C~~Cg~v~----------~Cp~Cd~~lt~-------H------~-----~~~~L~CH~Cg~---------------~~~  473 (730)
T COG1198         437 LCRDCGYIA----------ECPNCDSPLTL-------H------K-----ATGQLRCHYCGY---------------QEP  473 (730)
T ss_pred             ecccCCCcc----------cCCCCCcceEE-------e------c-----CCCeeEeCCCCC---------------CCC
Confidence            576666554          47777655433       4      3     234567888863               334


Q ss_pred             CCcccccCccc
Q psy7453         174 KPYACGQCAFR  184 (200)
Q Consensus       174 k~~~C~~C~k~  184 (200)
                      .|..|+.||-.
T Consensus       474 ~p~~Cp~Cgs~  484 (730)
T COG1198         474 IPQSCPECGSE  484 (730)
T ss_pred             CCCCCCCCCCC
Confidence            67788888754

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=86.76  E-value=0.6  Score=25.23  Aligned_cols=32  Identities=13%  Similarity=0.178  Sum_probs=15.7

Q ss_pred             ecCccCcccCChHHHHHHHHHcCCCCCcccccCcccc
Q psy7453         149 VCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS  185 (200)
Q Consensus       149 ~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f  185 (200)
                      .|+.|+..|.-....     +-.+....+|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            456666655544432     12223345566666554

>TIGR01384 TFS_arch transcription factor S, archaeal

Probab=86.65  E-value=0.32  Score=32.97  Aligned_cols=35  Identities=17%  Similarity=0.391  Sum_probs=19.5

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCC----CcccccCccccc
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEK----PYACGQCAFRSA  186 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k----~~~C~~C~k~f~  186 (200)
                      ..|+.||..-.....++    +-..+.    -|.|..|+..+.
T Consensus        63 ~~Cp~Cg~~~a~f~~~Q----~RsadE~~T~fy~C~~C~~~w~  101 (104)
T TIGR01384        63 VECPKCGHKEAYYWLLQ----TRRADEPETRFYKCTKCGYVWR  101 (104)
T ss_pred             CCCCCCCCCeeEEEEec----cCCCCCCcEEEEEeCCCCCeeE
Confidence            67888876544333322    122222    288888887654

There has been an apparent duplication event in the Halobacteriaceae lineage (Haloarcula, Haloferax, Haloquadratum, Halobacterium and Natromonas). There appears to be a separate duplication in Methanosphaera stadtmanae.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=85.92  E-value=0.5  Score=32.42  Aligned_cols=30  Identities=20%  Similarity=0.546  Sum_probs=21.6

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCH
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV  188 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~  188 (200)
                      ..|+.||..|...           +..|-.|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4688888888743           33677788888887654

The function of members of this family is unknown.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=85.59  E-value=0.37  Score=28.20  Aligned_cols=13  Identities=23%  Similarity=0.572  Sum_probs=9.0

Q ss_pred             ccccccccccccc
Q psy7453          77 SLCKHCHSQLSHL   89 (200)
Q Consensus        77 ~~C~~C~~~f~~~   89 (200)
                      |.|..||..|...
T Consensus         6 y~C~~Cg~~fe~~   18 (52)
T TIGR02605         6 YRCTACGHRFEVL   18 (52)
T ss_pred             EEeCCCCCEeEEE
Confidence            6677777777654

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>KOG2482|consensus

Probab=85.42  E-value=0.76  Score=37.71  Aligned_cols=50  Identities=26%  Similarity=0.466  Sum_probs=37.4

Q ss_pred             eecCccCcccCChHHHHHHHHH-cCC--------------------------CCCcccccCcccccCHHHHHHHHhh
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRT-HTG--------------------------EKPYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~-H~~--------------------------~k~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      .+|-.|.....+...|..||.+ |.=                          .+.-.|-.|.-.|.....|..||-.
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            4788888888888888889874 521                          1234578888889999999988864

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=85.33  E-value=0.93  Score=27.33  Aligned_cols=8  Identities=25%  Similarity=0.920  Sum_probs=4.4

Q ss_pred             ceecCccC
Q psy7453         147 KFVCYACD  154 (200)
Q Consensus       147 ~~~C~~C~  154 (200)
                      +|.|+.||
T Consensus        50 ~Y~Cp~CG   57 (61)
T COG2888          50 PYRCPKCG   57 (61)
T ss_pred             ceECCCcC
Confidence            45555554

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=85.17  E-value=0.24  Score=38.30  Aligned_cols=13  Identities=31%  Similarity=0.925  Sum_probs=9.7

Q ss_pred             eecCccCcccCCh
Q psy7453         148 FVCYACDYFSYNI  160 (200)
Q Consensus       148 ~~C~~C~~~f~~~  160 (200)
                      ..|+.||.++...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5899998877543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.43  E-value=0.51  Score=28.03  Aligned_cols=24  Identities=21%  Similarity=0.332  Sum_probs=21.7

Q ss_pred             CCCCCcccccChhhhccCHHHHHhc
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H  131 (200)
                      .||--+.|+-||+.|.. ...+.+|
T Consensus        13 DGE~~lrCPRC~~~FR~-~K~Y~RH   36 (65)
T COG4049          13 DGEEFLRCPRCGMVFRR-RKDYIRH   36 (65)
T ss_pred             CCceeeeCCchhHHHHH-hHHHHHH
Confidence            47788999999999999 9999999

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.26  E-value=0.55  Score=36.32  Aligned_cols=19  Identities=11%  Similarity=0.349  Sum_probs=14.8

Q ss_pred             CCCcccccccccccccccc
Q psy7453          74 QNHSLCKHCHSQLSHLDLL   92 (200)
Q Consensus        74 ~~~~~C~~C~~~f~~~~~l   92 (200)
                      ++...|++|++.|......
T Consensus         3 ~k~~~CPvC~~~F~~~~vr   21 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVR   21 (214)
T ss_pred             CCceECCCCCCeeeeeEEE
Confidence            3567899999999987544

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=83.62  E-value=0.44  Score=26.68  Aligned_cols=12  Identities=17%  Similarity=0.271  Sum_probs=5.2

Q ss_pred             cccccChhhhcc
Q psy7453         112 PFCIYCKAVLST  123 (200)
Q Consensus       112 ~~C~~C~~~f~~  123 (200)
                      |.|..||..|..
T Consensus         6 y~C~~Cg~~fe~   17 (42)
T PF09723_consen    6 YRCEECGHEFEV   17 (42)
T ss_pred             EEeCCCCCEEEE
Confidence            344444444433

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>KOG2893|consensus

Probab=82.90  E-value=0.3  Score=38.05  Aligned_cols=41  Identities=24%  Similarity=0.537  Sum_probs=23.1

Q ss_pred             cccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHH
Q psy7453         114 CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH  166 (200)
Q Consensus       114 C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H  166 (200)
                      |=+|++.|.. ..-|.+|      + +    .|.|+|.+|-+...+.-.|..|
T Consensus        13 cwycnrefdd-ekiliqh------q-k----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDD-EKILIQH------Q-K----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccch-hhhhhhh------h-h----hccceeeeehhhhccCCCceee
Confidence            5566666666 6666666      4 1    2346666666655544444444

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.57  E-value=1.1  Score=25.18  Aligned_cols=22  Identities=27%  Similarity=0.374  Sum_probs=9.2

Q ss_pred             CCcccccCcccccCH----HHHHHHH
Q psy7453         174 KPYACGQCAFRSASV----AGLHYHL  195 (200)
Q Consensus       174 k~~~C~~C~k~f~~~----~~L~~H~  195 (200)
                      ....|..|++.+...    +.|.+|+
T Consensus        15 ~~a~C~~C~~~~~~~~~~ts~l~~HL   40 (45)
T PF02892_consen   15 KKAKCKYCGKVIKYSSGGTSNLKRHL   40 (45)
T ss_dssp             S-EEETTTTEE-----SSTHHHHHHH
T ss_pred             CeEEeCCCCeEEeeCCCcHHHHHHhh
Confidence            334455555555442    4555555

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=82.33  E-value=0.75  Score=34.03  Aligned_cols=23  Identities=43%  Similarity=1.038  Sum_probs=19.4

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCCCCcccccCc
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA  182 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~  182 (200)
                      -|.|++||..             |.|+-|-+||+||
T Consensus       134 ~~vC~vCGy~-------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT-------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc-------------ccCCCCCcCCCCC
Confidence            5999999854             4578899999998

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=82.16  E-value=0.65  Score=25.50  Aligned_cols=12  Identities=17%  Similarity=0.531  Sum_probs=7.7

Q ss_pred             cccccccccccc
Q psy7453          77 SLCKHCHSQLSH   88 (200)
Q Consensus        77 ~~C~~C~~~f~~   88 (200)
                      |.|..||..|..
T Consensus         6 y~C~~Cg~~fe~   17 (41)
T smart00834        6 YRCEDCGHTFEV   17 (41)
T ss_pred             EEcCCCCCEEEE
Confidence            567777766653

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=81.44  E-value=0.74  Score=26.14  Aligned_cols=24  Identities=21%  Similarity=0.639  Sum_probs=13.5

Q ss_pred             cccccccccccccc-cccccccccC
Q psy7453          77 SLCKHCHSQLSHLD-LLDHCKTCSY  100 (200)
Q Consensus        77 ~~C~~C~~~f~~~~-~l~~C~~C~~  100 (200)
                      |.|..||..|.... ...+|+.||.
T Consensus         3 Y~C~~Cg~~~~~~~~~~irC~~CG~   27 (44)
T smart00659        3 YICGECGRENEIKSKDVVRCRECGY   27 (44)
T ss_pred             EECCCCCCEeecCCCCceECCCCCc
Confidence            66777776665542 2235555554

present in RNA polymerase I, II and III

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=81.32  E-value=0.92  Score=31.85  Aligned_cols=28  Identities=11%  Similarity=0.088  Sum_probs=17.3

Q ss_pred             ccccccCcccCCCCCCCCcccccChhhhcc
Q psy7453          94 HCKTCSYMIRPNANNTFSPFCIYCKAVLST  123 (200)
Q Consensus        94 ~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~  123 (200)
                      .|+.||+.|...  +..|..|+.||..|..
T Consensus        11 ~Cp~cg~kFYDL--nk~p~vcP~cg~~~~~   38 (129)
T TIGR02300        11 ICPNTGSKFYDL--NRRPAVSPYTGEQFPP   38 (129)
T ss_pred             cCCCcCcccccc--CCCCccCCCcCCccCc
Confidence            455555555532  2357778888877765

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>TIGR00622 ssl1 transcription factor ssl1

Probab=80.60  E-value=2.1  Score=29.53  Aligned_cols=54  Identities=20%  Similarity=0.331  Sum_probs=35.6

Q ss_pred             ccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCc
Q psy7453         113 FCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA  182 (200)
Q Consensus       113 ~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~  182 (200)
                      .|--|...|.. ......         ..-.....|.|+.|...|-..-+.-.|...|.      |+-|.
T Consensus        57 ~C~~C~~~f~~-~~~~~~---------~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~------CPGC~  110 (112)
T TIGR00622        57 FCFGCQGPFPK-PPVSPF---------DELKDSHRYVCAVCKNVFCVDCDVFVHESLHC------CPGCI  110 (112)
T ss_pred             cccCcCCCCCC-cccccc---------cccccccceeCCCCCCccccccchhhhhhccC------CcCCC
Confidence            48888888876 421110         11122346899999999988888888877664      66664

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	200
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-04
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-04

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
           H+RTHTGEKPY C  C + +A    L YHL++
Sbjct: 23  HLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER 54

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL 195
           ++  RT      + C  C      +  +R+H RTHTGEKPY C +C    +    LH H 
Sbjct: 94  RAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ 153
Query: 196 K 196
           +
Sbjct: 154 R 154

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	200
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	8e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 150 CYACDY-FSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
           C  C Y  S     +R H R H  ++P+ C  C+F +   + L  H+KK
Sbjct: 12  CSECSYSCSSK-AALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYH 194
            + +   P  C +C++  +S A L  H
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIH 28

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.9 bits (108), Expect = 1e-07
 Identities = 17/51 (33%), Positives = 24/51 (47%)

Query: 147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
           K++C  C         ++ HIRTHT  +PY C  C F   +   L  H+K 
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.2 bits (103), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TG KPY C +C  AFRS S   +H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIH 31

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 166 HIRTHTGEKPYACG 179
           H RTHTGE   + G
Sbjct: 31  HTRTHTGESGPSSG 44

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 21/42 (50%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 161 GCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKTYH 200
           G   S  RTHTGEKPYAC  C   FR      L  H  K YH
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQ--LLDMH-FKRYH 39

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 12/57 (21%), Positives = 14/57 (24%), Gaps = 9/57 (15%)

Query: 128 LIEHCRTCKSMIRTDPFRHK--FVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQC 181
           L  H +        DP      FVC  C   F+     M  H     G         
Sbjct: 31  LDMHFK-----RYHDPNFVPAAFVCSKCGKTFTRR-NTMARHADNCAGPDGVEGENS 81

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/21 (57%), Positives = 13/21 (61%)

Query: 161 GCMRSHIRTHTGEKPYACGQC 181
           G   S  RTH+GEKPY C  C
Sbjct: 1   GSSGSSGRTHSGEKPYECYIC 21

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 11/56 (19%)

Query: 151 YACDY----FSYNIGCMRSHIRTHTGE--KPYACGQC--AFRSASVAGLHYHLKKT 198
           Y C      F+ + G M+ HI     E    + C  C       S   L  HL+K 
Sbjct: 16  YECYICHARFTQS-GTMKMHILQKHTENVAKFHCPHCDTVIARKS--DLGVHLRKQ 68

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 4/34 (11%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYHLK 196
           S   + TGEKP+ C +C   F  +    L  HL+
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSC--SLFKHLR 33

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 6/25 (24%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQ 180
           FS++   +  H+R+H    P     
Sbjct: 22  FSWS-CSLFKHLRSHERTDPSGPSS 45

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 8/36 (22%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKK 197
            +HIRTHTGEKP+AC  C   F  +         K+
Sbjct: 20  TTHIRTHTGEKPFACDICGRKFARSD------ERKR 49

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TGEKPY C +C  +FR AS    H
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 1/25 (4%)

Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQ 180
           F +   C+  H R H+GEKP     
Sbjct: 22  FRWA-SCLLKHQRVHSGEKPSGPSS 45

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKPY C  C  AF   S  GLH H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKS--GLHIH 31

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.1 bits (100), Expect = 3e-06
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 166 HIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
           H R+HT EKPY CG C  AF    +  L  H +K 
Sbjct: 21  HYRSHTNEKPYPCGLCNRAFTRRDL--LIRHAQKI 53

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TGEKPY C +C  AFR+ S   +H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIH 31

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/18 (72%), Positives = 15/18 (83%)

Query: 164 RSHIRTHTGEKPYACGQC 181
            +HIRTHTGEKP+AC  C
Sbjct: 51  TTHIRTHTGEKPFACDIC 68

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 8/36 (22%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKK 197
             HIR HTG+KP+ C  C   F  +       HL  
Sbjct: 23  TRHIRIHTGQKPFQCRICMRNFSRSD------HLTT 52

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 5e-06
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEK Y C +C  +F  A 
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAP 26

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + +GEK + C +C   F   S   L  H
Sbjct: 2   SSGSSGSGEKSHTCDECGKNFCYISA--LRIH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKP+ C  C  AF      GL+ H
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHI--GLNQH 31

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C  AF   S
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDS 26

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C  AFR+ S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHS 26

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.9 bits (97), Expect = 6e-06
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TGEKPY C +C  AF + S   +H
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 166 HIRTHTGEKPYACG 179
           H RTHTGE   + G
Sbjct: 31  HQRTHTGESGPSSG 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   +  GEKPY C +C  AF S S   +H
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIH 31

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 166 HIRTHTGEKPYAC 178
           H+RTH+GEKP   
Sbjct: 31  HMRTHSGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TG++PY C +C  AF++ S
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKS 26

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.0 bits (100), Expect = 6e-06
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 150 CYACDY-FSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
           C  CDY  + +   +  H+R H+ E+P+ C  C  A R++S
Sbjct: 39  CKTCDYAAADS-SSLNKHLRIHSDERPFKCQICPYASRNSS 78

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 41.6 bits (99), Expect = 1e-05
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSAS 187
           ++H+R HTG KPY C  C  A   +S
Sbjct: 25  KTHMRCHTGVKPYKCKTCDYAAADSS 50

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 37.0 bits (87), Expect = 5e-04
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 150 CYACDY-FSYNIGCMRSHIRTHTGEKPYACG 179
           C  C Y    +   +  H+R+HTG+   + G
Sbjct: 67  CQICPYASRNS-SQLTVHLRSHTGDSGPSSG 96

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 15/55 (27%)

Query: 151 YACDY------FSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKK 197
           Y CD+      FS +   ++ H R HTG KP+ C  C   F  +       HLK 
Sbjct: 37  YQCDFKDCERRFSRS-DQLKRHQRRHTGVKPFQCKTCQRKFSRSD------HLKT 84

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 9/39 (23%)

Query: 151 YACDY------FSYNIGCMRSHIRTHTGEKPYAC--GQC 181
           + C Y      +      ++ H R HTGEKPY C    C
Sbjct: 7   FMCAYPGCNKRYFKL-SHLQMHSRKHTGEKPYQCDFKDC 44

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 148 FVCYACD-YFSYNIGCMRSHIRTHTGEKPYAC--GQC 181
           F C  C   FS +   +++H RTHTGEKP++C    C
Sbjct: 67  FQCKTCQRKFSRS-DHLKTHTRTHTGEKPFSCRWPSC 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.4 bits (101), Expect = 7e-06
 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 4/31 (12%)

Query: 166 HIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           H++ HTG KPY C  C   F        H H
Sbjct: 56  HMKIHTGIKPYECNICAKRFMWRD--SFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
           H+  H G +PY CG C   F+   
Sbjct: 28  HMSMHLGLRPYGCGVCGKKFKMKH 51

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.1 bits (95), Expect = 5e-05
 Identities = 5/24 (20%), Positives = 7/24 (29%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
           H    +  K Y   +       AS
Sbjct: 82  HRHVTSCTKSYEAAKAEQNTTEAS 105

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKPY C +C  AF   S   L  H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRS--NLFTH 31

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 7e-06
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TGEKPY C  C  +FR  S   +H
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 42.1 bits (100), Expect = 7e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)

Query: 166 HIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           H  +H+GEKPY+C  C   F+      + YH
Sbjct: 26  HKLSHSGEKPYSCPVCGLRFKRKD--RMSYH 54

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 6/40 (15%)

Query: 163 MRSHIRTHTGE--KPYACGQC--AFRSASVAGLHYHLKKT 198
           M  H+R+H G   KPY C  C   F       L+ H+K+ 
Sbjct: 51  MSYHVRSHDGSVGKPYICQSCGKGFSRPD--HLNGHIKQV 88

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKPY C  C  +F   S   LH H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKS--QLHVH 31

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C  C  AF   +
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHA 26

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + +GEKPY C +C  AF   S+  +H
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVH 31

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 6/14 (42%), Positives = 7/14 (50%)

Query: 166 HIRTHTGEKPYACG 179
           H RTH G    + G
Sbjct: 31  HERTHAGVSGPSSG 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKP+ C +C  +F  +S
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISS 26

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)

Query: 166 HIRTHTGEKPYACGQC--AFRSASVAGLH 192
              +  GEKPY C QC  AF       +H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.7 bits (95), Expect = 8e-06
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA 182
            +   R +  C  C     ++  +  H  +H+GEKPY+ G  +
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C  AF   S
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNS 26

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TGEKPY C QC  AF   S    H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTH 31

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TG KPY C +C  AF   S    H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTH 31

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C  AF   S
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRS 26

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + +GEKP+ C +C   F + S    + H
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNS--QCYSH 31

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TG K + C +C  AF   S   +H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMH 31

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY+C  C  AF  ++
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSA 26

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +GEKPY C  C  AF  ++
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSA 26

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKP+ C +C  +F   S
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNS 26

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C   FR  S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNS 26

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKPY C  C  +F   S   LH H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKS--QLHVH 31

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + +GEKPY C +C   ++      L +H
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRL--DLDFH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 12/32 (37%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   +  G  PY C QC  +F       L  H
Sbjct: 2   SSGSSGAGVNPYKCSQCEKSFSGKL--RLLVH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 2/32 (6%)

Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQ 180
           C  C+  FS     +  H R HT EKP     
Sbjct: 15  CSQCEKSFSGK-LRLLVHQRMHTREKPSGPSS 45

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + +GEKPY C +C   F   S+   H
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C  C  AF   +
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKA 26

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   +  GEK + C +C   F  AS   LH
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLH 31

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 2/32 (6%)

Query: 150 CYACD-YFSYNIGCMRSHIRTHTGEKPYACGQ 180
           C  CD  FS     +R H   H GEKP     
Sbjct: 15  CRECDMCFSQA-SSLRLHQNVHVGEKPSGPSS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TG+KPY C +C  AF   +
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNT 26

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TGE+ Y C +C  AF   S   +H
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKPY C +C   F       L+ H
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRR--DLYTH 31

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKP+ C  C  +F   S
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRS 26

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGE+PY C  C  AF   S
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRS 26

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY CG+C  AF   +
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKA 26

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C  C  AFR +S
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSS 26

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C  +F   S
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKS 26

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKP+ C +C   F   S   L+ H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRS--ALNVH 31

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TGEKPY C  C  AF       +H
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLH 192
           S   + TG KPY C QC   F   S   +H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +G+KPY C +C   F    
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIG 26

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 5/41 (12%)

Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           FS     +R+H RTHTGEKPY C +C  +F       LH H
Sbjct: 115 FSQL-AHLRAHQRTHTGEKPYKCPECGKSFSRED--NLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)

Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           FS +   +  H RTHTGEKPY C +C  +F       L  H
Sbjct: 31  FSRS-DHLAEHQRTHTGEKPYKCPECGKSFSDKK--DLTRH 68

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 5/41 (12%)

Query: 156 FSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           FS     +R+H RTHTGEKPYAC +C  +F   +   L  H
Sbjct: 87  FSQR-ANLRAHQRTHTGEKPYACPECGKSFSQLA--HLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.0 bits (100), Expect = 3e-05
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
            +H RTHTGEKPY C +C  +F       L+ H
Sbjct: 150 HTHQRTHTGEKPYKCPECGKSFSRRD--ALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 4/33 (12%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
            +      GEKPYAC +C  +F  +    L  H
Sbjct: 10  VAQAALEPGEKPYACPECGKSFSRSD--HLAEH 40

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C   FR  S
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNS 26

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKP+ C +C  AF + S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKS 26

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   +  GE+ + C  C   F  AS
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQAS 26

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TG+KP+ C  C  +FR+  
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKG 26

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + +GEKP+ C +C   F   S   LH H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNS--QLHSH 31

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 9/32 (28%), Positives = 12/32 (37%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + + EKPY C  C   +       L  H
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRL--NLDMH 31

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +GEKPY C +C  AF   +
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHT 26

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C   + S  
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKF 26

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + TGEKPY C  C  +F   S   L  H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKS--RLRIH 31

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +GEKP+ C +C  AFR   
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNI 26

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TG KPY C +C  AF   S
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTS 26

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
               +  GEKPY C  C   FR   
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQ 25

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.2 bits (90), Expect = 5e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 5/31 (16%)

Query: 151 YACDY----FSYNIGCMRSHIRTHTGEKPYA 177
           Y C+     F +    ++SH+R HTG  P +
Sbjct: 12  YPCEICGTRFRHL-QTLKSHLRIHTGSGPSS 41

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   +  GEKPY C +C  +F  + 
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSY 26

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 4/18 (22%), Positives = 9/18 (50%)

Query: 164 RSHIRTHTGEKPYACGQC 181
           + H++ H+  + Y C   
Sbjct: 57  KEHMKLHSDTRDYICEFS 74

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C  AF   +
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTT 26

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGE+ Y C +C  AF   S
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKS 26

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TG+KPY C +C   F   S
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNS 26

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C   F   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNS 26

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKP+ CG+C  ++    
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRV 26

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C  AF   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTS 26

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKP  C +C  AF   S
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKS 26

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 6/25 (24%), Positives = 10/25 (40%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +  K + C +C   F   S
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKS 26

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +GE+PY C +C   F   S
Sbjct: 2   SSGSSGSGERPYGCNECGKNFGRHS 26

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.5 bits (96), Expect = 3e-05
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
           H RTHT E+PY C  C  AFR   
Sbjct: 36  HERTHTDERPYTCDICHKAFRRQD 59

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.3 bits (93), Expect = 9e-05
 Identities = 4/24 (16%), Positives = 7/24 (29%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
                  +K + C  C   F  + 
Sbjct: 8   GRLPSKTKKEFICKFCGRHFTKSY 31

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 2/26 (7%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSAS 187
           R H   H+ EKP+ C +C   F  + 
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSR 87

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.1 bits (95), Expect = 3e-05
 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
            H RTHTGEKPY C +C  AF   S   L  H
Sbjct: 36  KHRRTHTGEKPYKCDECGKAFIQRS--HLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 5/24 (20%), Positives = 9/24 (37%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
                   + Y C +C  +F  +S
Sbjct: 9   SEWQQRERRRYKCDECGKSFSHSS 32

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGE PY C +C  AF    
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKY 26

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 8/34 (23%)

Query: 166 HIRTHTGEKPYACGQC--AFRSASVAGLHYHLKK 197
              +  GEKPY C  C   F   +      HL+ 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVA------HLRA 29

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C   F   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNS 26

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 8/25 (32%), Positives = 10/25 (40%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + T  K Y C +C  AF    
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIF 26

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGE PY C +C   F    
Sbjct: 2   SSGSSGTGENPYECCECGKVFSRKD 26

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 5/14 (35%), Positives = 9/14 (64%)

Query: 166 HIRTHTGEKPYACG 179
           H +TH+G+   + G
Sbjct: 31  HQKTHSGQSGPSSG 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGE P+ C +C   F   +
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKT 26

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   +  G+K + C +C   F  +S
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSS 26

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +GEKPY C +C   F   S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNS 26

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 4e-05
 Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGE+P+ C +C  +F  ++
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSA 26

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C   F   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNS 26

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           S   + +GEKP+ C +C   F   S   LH H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNS--HLHSH 31

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 6/54 (11%)

Query: 148 FVCYACD-YFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
           F C  C   F      +R H+ +HTGE PY C  C   F       L  H+ K 
Sbjct: 67  FTCSVCQETFRRR-MELRLHMVSHTGEMPYKCSSCSQQFMQKK--DLQSHMIKL 117

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.8 bits (94), Expect = 7e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
           + H R HTGEKP+ C +C   +       L  H
Sbjct: 24  KVHNRKHTGEKPFECPKCGKCYFRKE--NLLEH 54

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEK Y C +C   F   S
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNS 26

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 151 YACD----YFSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
           Y CD     F Y  G + SH   HTGEKPY C  C   F   +
Sbjct: 18  YKCDRCQASFRYK-GNLASHKTVHTGEKPYRCNICGAQFNRPA 59

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 4/33 (12%)

Query: 164 RSHIRTHTGEKPYACGQC--AFRSASVAGLHYH 194
             H      +KPY C +C  +FR      L  H
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKG--NLASH 36

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 39.7 bits (94), Expect = 4e-05
 Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
           H+  H+  +PY C  C   F   S
Sbjct: 20  HLLIHSDTRPYPCQYCGKRFHQKS 43

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 39.3 bits (93), Expect = 6e-05
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
           H   HTGEKP+ C  C  AF  +S
Sbjct: 48  HTFIHTGEKPHKCQVCGKAFSQSS 71

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + TGEKPY C +C   F   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNS 26

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   +  GEK Y C  C   F  +S
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSS 26

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)

Query: 151 YACDYFSYNIGCMRS-----HIRTHTGEKPYACGQC 181
           YAC   S +    RS     HIR HTG+KP+ C  C
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRIC 55

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSAS 187
           S   + +GE+P+ C +C   F   S
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRS 26

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
               H+GEKPY C +C  AF  +S
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSS 28

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.6 bits (91), Expect = 7e-05
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)

Query: 166 HIRTHTGEKPYACGQC--AFRSAS 187
           H R HTGEKPY C +C  AF   S
Sbjct: 33  HQRVHTGEKPYKCLECGKAFSQNS 56

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 13/40 (32%)

Query: 151 YACDYFSYNIGCMRS---------HIRTHTGEKPYACGQC 181
           Y C +     GC            H R HTG KP+ CG C
Sbjct: 46  YKCTW----EGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 11/15 (73%), Positives = 14/15 (93%)

Query: 164 RSHIRTHTGEKPYAC 178
           ++H+RTHTGEKPY C
Sbjct: 34  KAHLRTHTGEKPYKC 48

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 166 HIRTHTGEKPYACGQC 181
           H R HTG +P+ C +C
Sbjct: 56  HYRKHTGHRPFQCQKC 71

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/15 (73%), Positives = 14/15 (93%)

Query: 164 RSHIRTHTGEKPYAC 178
           ++H+RTHTGEKPY C
Sbjct: 24  KAHLRTHTGEKPYHC 38

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 10/45 (22%)

Query: 151 YACDY------FSYNIGCMRSHIRTHTGEKPYACGQC--AFRSAS 187
            AC +      F  N   MR H+ TH G + + C +C  AF  +S
Sbjct: 6   IACPHKGCTKMFRDN-SAMRKHLHTH-GPRVHVCAECGKAFVESS 48

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 6/35 (17%)

Query: 164 RSHIRTHTGEKPYACG--QC--AFRSASVAGLHYH 194
           R+H+R HTG++PY C    C   F  ++   L  H
Sbjct: 81  RTHVRIHTGDRPYVCPFDGCNKKFAQST--NLKSH 113

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 6/35 (17%)

Query: 164 RSHIRTHTGEKPYAC--GQC--AFRSASVAGLHYH 194
           + H   HTGEKP+ C    C   F       L  H
Sbjct: 51  KRHQLVHTGEKPFQCTFEGCGKRFSLDF--NLRTH 83

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 165 SHIRTHTGEKPYACG 179
           SH RTH GE   + G
Sbjct: 28  SHQRTHAGESGPSSG 42

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 2/22 (9%)

Query: 168 RTHTGEKPYACGQC--AFRSAS 187
              +GE PY C +C  AF    
Sbjct: 3   SGSSGENPYECSECGKAFNRKD 24

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 10/55 (18%), Positives = 14/55 (25%), Gaps = 7/55 (12%)

Query: 148 FVCYACDYFSYNIGCMRSHIRTHT---GEKPYACGQC--AFRSASVAGLHYHLKK 197
             C  C +       +  H R H        + C  C   F       +  H  K
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPD--SVAAHRSK 60

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%)

Query: 166 HIRTHTGEKPYACGQC--AFRSASVAGLH 192
              +  GE PY CGQC  +F       +H
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVH 30

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 4/36 (11%)

Query: 165 SHIRTHTGEKPYACGQC--AFRSASVAGLHYHLKKT 198
           S   + +  KPY C  C   F       L+ H+K+ 
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPD--HLNGHIKQV 35

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 3/27 (11%)

Query: 163 MRSHI-RTHTGEKPYACGQC--AFRSA 186
           +  HI + HT E+P+ C        S 
Sbjct: 28  LNGHIKQVHTSERPHKCQVWVSGPSSG 54

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 8/35 (22%), Positives = 11/35 (31%), Gaps = 4/35 (11%)

Query: 168 RTHTGEKPYACGQC--AFRSASVAGLHYHLKKTYH 200
            T  GE  Y C  C   +   S      H   ++ 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHIS--NFCRHYVTSHK 35

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 165 SHIRTHTGEKPYAC 178
           S   + TGEKP+AC
Sbjct: 2   SSGSSGTGEKPFAC 15

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 10/15 (66%), Positives = 14/15 (93%)

Query: 164 RSHIRTHTGEKPYAC 178
           ++H RTHTGEKP++C
Sbjct: 36  KAHTRTHTGEKPFSC 50

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 7/37 (18%)

Query: 148 FVCYACDY------FSYNIGCMRSHIRTHTGEKPYAC 178
           FVC+          F      +  H+R HTGEKP+ C
Sbjct: 35  FVCHWGGCSRELRPFK-AQYMLVVHMRRHTGEKPHKC 70

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 10/38 (26%)

Query: 164 RSHIRTHTGEKPYACGQ--C--AFRSASVAGLHYHLKK 197
           ++H+R+HTGEKPY C    C  AF +AS         K
Sbjct: 86  KTHLRSHTGEKPYMCEHEGCSKAFSNAS------DRAK 117

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 14/45 (31%)

Query: 151 YACDYFSYNIGCMR------------SHIRTHTGEKPYAC--GQC 181
              ++  Y   C R            +HIR HTGEKP+ C    C
Sbjct: 54  EQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC 98

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 10/36 (27%)

Query: 166 HIRTHTGEKPYACG--QC--AFRSASVAGLHYHLKK 197
           H RTHTGEKP+ C    C   F ++S        KK
Sbjct: 111 HKRTHTGEKPFKCEFEGCDRRFANSS------DRKK 140

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 20/91 (21%), Positives = 25/91 (27%), Gaps = 4/91 (4%)

Query: 111 SPF-CIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT 169
           S F C  C A   T L EL  H          D            +       +      
Sbjct: 18  SKFRCKDCSAAYDT-LVELTVHMNETGH--YRDDNHETDNNNPKRWSKPRKRSLLEMEGK 74

Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLKKTYH 200
              +K   C  C     S+  L  H+ KT H
Sbjct: 75  EDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 168 RTHTGEKPYACGQC--AFRSASVAGLH 192
              +G++ Y C +C  +FR      LH
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLH 29

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 35.0 bits (81), Expect = 8e-04
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 168 RTHTGEKPYACGQC 181
              +GEKPY+C +C
Sbjct: 3   SGSSGEKPYSCAEC 16

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	200
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.88
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.88
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.86
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.85
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.85
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.84
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.83
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.81
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.8
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.8
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.78
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.77
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.76
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.76
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.74
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.72
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.71
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.7
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.7
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.7
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.69
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.69
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.69
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.68
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.67
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.67
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.66
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.65
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.64
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.63
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.61
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.61
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.61
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.58
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.58
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.57
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.56
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.55
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.53
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.51
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.5
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.5
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.49
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.49
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.48
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.48
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.47
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.47
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.46
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.46
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.46
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.46
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.46
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.46
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.45
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.45
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.45
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.45
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.45
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.44
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.42
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.4
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.39
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.38
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.36
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.34
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.34
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.34
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.32
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.31
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.3
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.3
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.3
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.29
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.28
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.28
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.25
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.24
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.22
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.14
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.1
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.1
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.09
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.03
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.01
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.01
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.01
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.99
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.98
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.96
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.96
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.96
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.95
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.92
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.91
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.9
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.88
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.88
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.88
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.88
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.86
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.83
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.8
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.79
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.74
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.74
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.7
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.69
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.69
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.69
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.66
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.65
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.64
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.64
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.6
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.6
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.59
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.58
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.57
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.56
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.55
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.55
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.54
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.54
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.54
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.54
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.53
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.51
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.51
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.5
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.48
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.48
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.47
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.47
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.46
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.46
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.46
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.83
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.44
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.82
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.44
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.81
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.8
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.79
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.42
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.39
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.36
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.34
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.32
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.5
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.1
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.89
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.52
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.4
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.16
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.81
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.71
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.44
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.33
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.61
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.48
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.72
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.81
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	89.74
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	89.24
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.96
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	83.5
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	82.85
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	82.06
2kdx_A	119	HYPA, hydrogenase/urease nickel incorporation prot	82.01
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	81.76
2lcq_A	165	Putative toxin VAPC6; PIN domain, Zn ribbon domain	81.73
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.03

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=3.8e-30  Score=193.97  Aligned_cols=143  Identities=24%  Similarity=0.338  Sum_probs=121.4

Q ss_pred             hcccccccccchhhhhhhhhhhcCCCCCCCcccccccccccccccc------------cccccccCcccCCCC-------
Q psy7453          47 TAQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLL------------DHCKTCSYMIRPNAN-------  107 (200)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l------------~~C~~C~~~f~~~~~-------  107 (200)
                      ....+...|.....|..|+..   |.++++|.|+.|++.|.+...|            +.|+.|++.|.....       
T Consensus        23 ~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           23 ACPECGKSFSRSDHLAEHQRT---HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             --------CCSSHHHHHGGGC---C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCCCccccCCHHHHHHHHHH---cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            445667788888888888877   8889999999999999988777            379999999976544       


Q ss_pred             --CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccc
Q psy7453         108 --NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS  185 (200)
Q Consensus       108 --~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f  185 (200)
                        ++++|.|++|++.|.+ ...|..|      + ++|.+++||.|+.|++.|.....|..|+++|+++++|.|++|++.|
T Consensus       100 h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f  171 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQ-LAHLRAH------Q-RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF  171 (190)
T ss_dssp             HHTCCCEECTTTCCEESS-HHHHHHH------H-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             cCCCCCCcCCCCCCccCC-HHHHHHH------H-HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCcc
Confidence              7899999999999999 9999999      9 9999999999999999999999999999999999999999999999


Q ss_pred             cCHHHHHHHHhhhcC
Q psy7453         186 ASVAGLHYHLKKTYH  200 (200)
Q Consensus       186 ~~~~~L~~H~~~h~g  200 (200)
                      .+...|..|+++|+|
T Consensus       172 ~~~~~L~~H~~~H~~  186 (190)
T 2i13_A          172 SRRDALNVHQRTHTG  186 (190)
T ss_dssp             SSHHHHHHHHTTC--
T ss_pred             CCHHHHHHHHHhcCC
Confidence            999999999999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.94  E-value=5e-28  Score=182.35  Aligned_cols=130  Identities=26%  Similarity=0.445  Sum_probs=100.2

Q ss_pred             hhhhhhhhhcCCCCCCCcccccccccccccccc------------cccccccCcccCCCC---------CCCCcccccCh
Q psy7453          60 NLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLL------------DHCKTCSYMIRPNAN---------NTFSPFCIYCK  118 (200)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l------------~~C~~C~~~f~~~~~---------~~~~~~C~~C~  118 (200)
                      .+..|...   +.++++|.|+.|++.|.+...|            +.|+.|++.|.....         ++++|.|++|+
T Consensus         8 ~l~~h~~~---~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   84 (190)
T 2i13_A            8 SSVAQAAL---EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECG   84 (190)
T ss_dssp             --------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             cchhhhhh---cCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccC
Confidence            34556555   7889999999999999988766            379999999987544         78899999999


Q ss_pred             hhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhh
Q psy7453         119 AVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       119 ~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      +.|.+ ...|..|      + +.|.++++|.|+.|++.|.....|..|+++|+++++|.|++||+.|.+...|..|+++|
T Consensus        85 ~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  156 (190)
T 2i13_A           85 KSFSQ-RANLRAH------Q-RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH  156 (190)
T ss_dssp             CEESC-HHHHHHH------H-HHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CccCC-HHHHHHH------H-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            99999 9999999      9 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC
Q psy7453         199 YH  200 (200)
Q Consensus       199 ~g  200 (200)
                      +|
T Consensus       157 ~~  158 (190)
T 2i13_A          157 TG  158 (190)
T ss_dssp             HC
T ss_pred             CC
Confidence            75

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=8.1e-26  Score=158.51  Aligned_cols=115  Identities=22%  Similarity=0.344  Sum_probs=103.4

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhh---cCCCCCc
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIR---TDPFRHK  147 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~---~h~~~k~  147 (200)
                      .+++++|.|+.|++.|.+...|..+       ...+.++++|.|++|++.|.+ ...|..|      + +   .|.++++
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~~~~~~~~~~   66 (124)
T 2dlq_A            2 SSGSSGVECPTCHKKFLSKYYLKVH-------NRKHTGEKPFECPKCGKCYFR-KENLLEH------E-ARNCMNRSEQV   66 (124)
T ss_dssp             CCCCSSCCCTTTCCCCSSHHHHHHH-------HHHHSSCCSCBCTTTCCBCSS-HHHHHHH------H-HHCCCCSCCCC
T ss_pred             CCCCCCCCCCCCCCcCCCHHHHHHH-------HHhCCCCCCeECCCCCchhcC-HHHHHHH------H-hhhhcCCCCCC
Confidence            4678899999999999999988654       233457889999999999999 9999999      8 5   4678999


Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhh-hcC
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKK-TYH  200 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~g  200 (200)
                      |.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|++. |.|
T Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            99999999999999999999999999999999999999999999999984 654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=7.7e-26  Score=164.76  Aligned_cols=138  Identities=20%  Similarity=0.286  Sum_probs=119.7

Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCCcccccc-----cccccccccccccccccCcccCCCCCCCCccccc--Chhh
Q psy7453          48 AQLVLMSLDQILNLNLSVLLVTTIPTQNHSLCKHC-----HSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIY--CKAV  120 (200)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C-----~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~--C~~~  120 (200)
                      ...+...|....+|..|+.....|.++++|.|+.|     ++.|.+...|...       ...+.++++|.|++  |++.
T Consensus         6 C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H-------~~~h~~~~~~~C~~~~C~~~   78 (155)
T 2gli_A            6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-------MRRHTGEKPHKCTFEGCRKS   78 (155)
T ss_dssp             BTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHH-------THHHHCCCCCCCCSTTCCCC
T ss_pred             cCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHH-------HHhcCCCCCccCCCCCCCCc
Confidence            34567788888889999875444889999998754     3788887777543       22334788999985  9999


Q ss_pred             hccCHHHHHhchhhhhhhhhcCCCCCceecCc--cCcccCChHHHHHHH-HHcCCCCCccccc--CcccccCHHHHHHHH
Q psy7453         121 LSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHI-RTHTGEKPYACGQ--CAFRSASVAGLHYHL  195 (200)
Q Consensus       121 f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~-~~H~~~k~~~C~~--C~k~f~~~~~L~~H~  195 (200)
                      |.+ ...|..|      + ++|.+++||.|++  |++.|...+.|..|+ ++|+++++|.|++  |++.|.+...|..|+
T Consensus        79 f~~-~~~l~~H------~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~  150 (155)
T 2gli_A           79 YSR-LENLKTH------L-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV  150 (155)
T ss_dssp             CSS-HHHHHHH------H-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHH
T ss_pred             ccC-HHHHHHH------H-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHH
Confidence            999 9999999      9 9999999999998  999999999999998 8999999999998  999999999999999


Q ss_pred             hhhcC
Q psy7453         196 KKTYH  200 (200)
Q Consensus       196 ~~h~g  200 (200)
                      ++|+|
T Consensus       151 ~~hhg  155 (155)
T 2gli_A          151 KTVHG  155 (155)
T ss_dssp             HHSCC
T ss_pred             HhhcC
Confidence            99987

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.92  E-value=1.4e-25  Score=168.85  Aligned_cols=137  Identities=17%  Similarity=0.312  Sum_probs=103.3

Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCCccc--cccccccccccccc------------ccc--cccCcccCC--------
Q psy7453          50 LVLMSLDQILNLNLSVLLVTTIPTQNHSLC--KHCHSQLSHLDLLD------------HCK--TCSYMIRPN--------  105 (200)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~------------~C~--~C~~~f~~~--------  105 (200)
                      .+...|.....|..|+..   |.++++|.|  +.|++.|.+...|.            .|+  .|++.|...        
T Consensus        19 ~C~~~f~~~~~L~~H~~~---h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   95 (190)
T 1tf6_A           19 DCGAAYNKNWKLQAHLCK---HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN   95 (190)
T ss_dssp             TTCCBCSSHHHHHHHHHH---HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHH
T ss_pred             CCcchhCCHHHHHHHHHh---cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHH
Confidence            355666666667777666   666777777  66777777766652            455  566665432        


Q ss_pred             --C-CCCCCccc--ccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc--cCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         106 --A-NNTFSPFC--IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       106 --~-~~~~~~~C--~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                        + .++++|.|  +.|++.|.+ ...|..|      + ++|++++||.|+.  |++.|...+.|..|+++|+|   |+|
T Consensus        96 ~~h~~~~~~~~C~~~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C  164 (190)
T 1tf6_A           96 RFHNIKICVYVCHFENCGKAFKK-HNQLKVH------Q-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC  164 (190)
T ss_dssp             TTSSTTTSCCEECSSSSCEECSS-HHHHHHH------H-GGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCC
T ss_pred             HhcCCCcceeeCCCCCCccccCC-HHHHHHH------H-HHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcC
Confidence              2 25678888  788888888 8888888      8 8888888888877  88888888888888888887   888


Q ss_pred             cc---CcccccCHHHHHHHHhhhcC
Q psy7453         179 GQ---CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       179 ~~---C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +.   |++.|.+...|..|+++|+|
T Consensus       165 ~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          165 KKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CCCCcCCCccccHHHHHHHHHhhcC
Confidence            88   88888888888888888875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=6.6e-26  Score=157.97  Aligned_cols=112  Identities=24%  Similarity=0.406  Sum_probs=102.9

Q ss_pred             CCCCCccccc--ccccccccccccccccccCcccCCCCCCCCcccc--cChhhhccCHHHHHhchhhhhhhhhcCCCCCc
Q psy7453          72 PTQNHSLCKH--CHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCI--YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHK  147 (200)
Q Consensus        72 ~~~~~~~C~~--C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~--~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~  147 (200)
                      +++++|.|+.  |++.|.+...|..+       ...+.++++|.|+  .|++.|.+ ...|..|      + ++|.++++
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~~   66 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMH-------SRKHTGEKPYQCDFKDCERRFSR-SDQLKRH------Q-RRHTGVKP   66 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHH-------HHHHHTTCCEECCSTTCCCEESS-HHHHHHH------H-HHHHCCCC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHH-------HHhhCCCCCccCCCCCCcCccCC-HHHHHHH------H-HHcCCCCC
Confidence            5788999997  99999999988654       2234478899999  79999999 9999999      9 99999999


Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCCCccc--ccCcccccCHHHHHHHHhhh
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEKPYAC--GQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~h  198 (200)
                      |.|++|++.|.....|..|+++|+++++|.|  +.||+.|.+...|..|+++|
T Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999999999999999999  89999999999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=2.8e-25  Score=158.57  Aligned_cols=104  Identities=18%  Similarity=0.246  Sum_probs=85.1

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      +.|+++|.|++|++.|.....|..+       ...+.+++||.|++|++.|.+ .+.|..|      + ++|++++||.|
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H-------~~~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C   81 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRH-------FNIHSWEKKYPCRYCEKVFPL-AEYRTKH------E-IHHTGERRYQC   81 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHH-------HHHHHCCSCEECSSSSCEESS-HHHHHHH------H-HHHHTCCCEEE
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHH-------HHHcCCCCCeeCCccCeeccc-ccchhhh------c-cccCCCccccC
Confidence            7788888888888888888888654       445557888888888888888 8888888      8 88888888888


Q ss_pred             CccCcccCChHHHHHHHHHcCCCC------CcccccCcccccCHH
Q psy7453         151 YACDYFSYNIGCMRSHIRTHTGEK------PYACGQCAFRSASVA  189 (200)
Q Consensus       151 ~~C~~~f~~~~~l~~H~~~H~~~k------~~~C~~C~k~f~~~~  189 (200)
                      ++||+.|...+.|..|+++|++++      +|+|..|++.|....
T Consensus        82 ~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           82 LACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             SSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             CCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence            888888888888888888877653      588888888876543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=5.2e-25  Score=154.65  Aligned_cols=112  Identities=20%  Similarity=0.341  Sum_probs=99.8

Q ss_pred             CCCCcccc--cccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453          73 TQNHSLCK--HCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus        73 ~~~~~~C~--~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      ++++|.|+  .|++.|.+...|..+.       ..+ ++++|.|++|++.|.+ ...|..|      + ++|.++++|.|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~-------~~h-~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C   65 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHL-------HTH-GPRVHVCAECGKAFVE-SSKLKRH------Q-LVHTGEKPFQC   65 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHH-------GGG-SCCCEECTTTCCEESS-HHHHHHH------G-GGTSCCCCEEC
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHH-------HHc-CCCCeECCCCCchhCC-HHHHHHH------H-HHcCCCCCeeC
Confidence            46789999  8999999999887642       223 6789999999999999 9999999      9 99999999999


Q ss_pred             Cc--cCcccCChHHHHHHHHHcCCCCCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         151 YA--CDYFSYNIGCMRSHIRTHTGEKPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       151 ~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +.  |++.|.....|..|+++|.++++|.|+  .|++.|.+...|..|+++|+|
T Consensus        66 ~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             CSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             CCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            86  999999999999999999999999995  599999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.90  E-value=3.2e-24  Score=161.40  Aligned_cols=110  Identities=13%  Similarity=0.274  Sum_probs=93.2

Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCCcccc--cccccccccccc--------------ccc--ccccCcccCCCC----
Q psy7453          50 LVLMSLDQILNLNLSVLLVTTIPTQNHSLCK--HCHSQLSHLDLL--------------DHC--KTCSYMIRPNAN----  107 (200)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l--------------~~C--~~C~~~f~~~~~----  107 (200)
                      .+...|.....|..|+..   |.++++|.|+  .|++.|.+...|              +.|  +.|++.|.....    
T Consensus        49 ~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H  125 (190)
T 1tf6_A           49 GCEKGFTSLHHLTRHSLT---HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH  125 (190)
T ss_dssp             TCCCCCSSHHHHHHHHTT---TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHHH---ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHH
Confidence            355778888888888877   8889999999  899999877655              367  889999876543    


Q ss_pred             -----CCCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc---cCcccCChHHHHHHHHHcCCC
Q psy7453         108 -----NTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA---CDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       108 -----~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~---C~~~f~~~~~l~~H~~~H~~~  173 (200)
                           +++||.|+.  |++.|.+ .+.|..|      + ++|++   |.|+.   |++.|.....|..|+++|+|+
T Consensus       126 ~~~H~~~~~~~C~~~~C~k~F~~-~~~L~~H------~-~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          126 QFSHTQQLPYECPHEGCDKRFSL-PSRLKRH------E-KVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HGGGSSSCSSBCCSSSCCCBCSS-HHHHHHH------H-TSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHhCCCCCccCCCCCCCchhcC-HHHHHHH------H-HHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence                 789999988  9999999 9999999      8 89988   88999   999999999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=3.7e-25  Score=157.96  Aligned_cols=87  Identities=23%  Similarity=0.395  Sum_probs=84.1

Q ss_pred             CCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccc
Q psy7453         106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS  185 (200)
Q Consensus       106 ~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f  185 (200)
                      .+|+++|.|++|++.|.+ .+.|..|      + ++|++++||.|++||+.|...+.|..|+++|+|++||.|++||+.|
T Consensus        17 h~Gek~y~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F   88 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVC-LTSLRRH------F-NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSF   88 (133)
T ss_dssp             ETTEEEEEETTTCCEESC-HHHHHHH------H-HHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             cCCCcCeECCCCCCCcCC-HHHHHHH------H-HHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCc
Confidence            458999999999999999 9999999      9 9999999999999999999999999999999999999999999999


Q ss_pred             cCHHHHHHHHhhhcC
Q psy7453         186 ASVAGLHYHLKKTYH  200 (200)
Q Consensus       186 ~~~~~L~~H~~~h~g  200 (200)
                      .+...|..|+++|+|
T Consensus        89 ~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           89 INYQFMSSHIKSVHS  103 (133)
T ss_dssp             SSHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHhHHhcC
Confidence            999999999999874

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=5.6e-24  Score=155.03  Aligned_cols=116  Identities=23%  Similarity=0.280  Sum_probs=102.3

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCC--------CcccccChhhhccCHHHHHhchhhhhhhhhcC
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTF--------SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTD  142 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~--------~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h  142 (200)
                      ..++.+|.|+.|++.|.+...|..+..      ..+.++.        .|.|++|++.|.+ ...|..|      + ++|
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~------~~H~~~~~~~~~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h   85 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVT------MEHVGGPEQNNHVCYWEECPREGKSFKA-KYKLVNH------I-RVH   85 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHH------TTTSCCTTCSSCCCCBTTCTTSSCCCSS-HHHHHHH------T-HHH
T ss_pred             chhhcccccccCCcccCCHHHHHHHHH------hhcCCCcccCCccccccCCCCcccccCC-HHHHHHH------H-Hhc
Confidence            456778999999999999998865421      1122222        3899999999999 9999999      9 999


Q ss_pred             CCCCceecCc--cCcccCChHHHHHHHHHcCCCCCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         143 PFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       143 ~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .++++|.|++  |++.|.....|..|+++|+++++|.|+.  |++.|.+...|..|+++|+|
T Consensus        86 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A           86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            9999999998  9999999999999999999999999997  99999999999999999986

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=9.2e-23  Score=136.84  Aligned_cols=86  Identities=26%  Similarity=0.550  Sum_probs=83.2

Q ss_pred             CCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCccccc
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA  186 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~  186 (200)
                      .++++|.|++|++.|.+ ...|..|      + +.|.++++|.|+.|++.|.....|..|+++|.++++|.|++|++.|.
T Consensus         4 ~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   75 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSR-KDKLKTH------M-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASR   75 (96)
T ss_dssp             CCCCCCCBTTTTBCCCC-HHHHHHH------G-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEES
T ss_pred             CCCcCeECCCCCCccCC-HHHHHHH------H-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccC
Confidence            46789999999999999 9999999      9 99999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhhcC
Q psy7453         187 SVAGLHYHLKKTYH  200 (200)
Q Consensus       187 ~~~~L~~H~~~h~g  200 (200)
                      +...|..|+++|+|
T Consensus        76 ~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           76 NSSQLTVHLRSHTG   89 (96)
T ss_dssp             SHHHHHHHHTTCCS
T ss_pred             CHHHHHHHHHHhcC
Confidence            99999999999986

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.88  E-value=3e-23  Score=135.10  Aligned_cols=82  Identities=24%  Similarity=0.335  Sum_probs=79.3

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHH
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAG  190 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~  190 (200)
                      ||.|++|++.|.. ...|..|      + ++|.++++|.|+.|++.|.....|..|+++|.++++|.|++|++.|.+...
T Consensus         1 ~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   72 (82)
T 2kmk_A            1 SFDCKICGKSFKR-SSTLSTH------L-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSN   72 (82)
T ss_dssp             CEECSSSCCEESS-HHHHHHH------H-HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHH
T ss_pred             CccCCCCcccccC-chhHHHH------H-HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHH
Confidence            6899999999999 9999999      9 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcC
Q psy7453         191 LHYHLKKTYH  200 (200)
Q Consensus       191 L~~H~~~h~g  200 (200)
                      |..|+++|+|
T Consensus        73 l~~H~~~H~g   82 (82)
T 2kmk_A           73 LITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHC-
T ss_pred             HHHHHHhhCC
Confidence            9999999987

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.87  E-value=5.7e-23  Score=136.15  Aligned_cols=85  Identities=29%  Similarity=0.440  Sum_probs=80.8

Q ss_pred             CCCCcccc--cChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccc
Q psy7453         108 NTFSPFCI--YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRS  185 (200)
Q Consensus       108 ~~~~~~C~--~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f  185 (200)
                      ++++|.|+  .|++.|.. ...|..|      + ++|.++++|.|+.|++.|.....|..|+++|.++++|.|++|++.|
T Consensus         1 ~~k~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   72 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQ-SGSLTRH------I-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF   72 (90)
T ss_dssp             --CCEECCSSSCCCEESS-HHHHHHH------H-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             CCCceECCCCCCCCccCC-HHHHHHH------H-HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchh
Confidence            46899998  69999999 9999999      9 9999999999999999999999999999999999999999999999


Q ss_pred             cCHHHHHHHHhhhcC
Q psy7453         186 ASVAGLHYHLKKTYH  200 (200)
Q Consensus       186 ~~~~~L~~H~~~h~g  200 (200)
                      .+...|..|+++|+|
T Consensus        73 ~~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           73 ARSDERKRHTKIHLR   87 (90)
T ss_dssp             SSHHHHHHHHGGGGC
T ss_pred             CCHHHHHHHHHHhcc
Confidence            999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.86  E-value=3.2e-22  Score=136.64  Aligned_cols=86  Identities=21%  Similarity=0.381  Sum_probs=82.6

Q ss_pred             CCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCccccc
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSA  186 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~  186 (200)
                      ..+++|.|++|++.|.. ...|..|      + ++|.++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.
T Consensus        13 ~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   84 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTK-SYNLLIH------E-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFC   84 (106)
T ss_dssp             CCCCCCBCSSSCCBCSS-HHHHHHH------H-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCS
T ss_pred             CCCcCeECCCCCCccCC-HHHHHHH------H-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCccc
Confidence            46789999999999999 9999999      9 99999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhhhcC
Q psy7453         187 SVAGLHYHLKKTYH  200 (200)
Q Consensus       187 ~~~~L~~H~~~h~g  200 (200)
                      +...|..|+++|+|
T Consensus        85 ~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           85 QSRTLAVHKTLHMQ   98 (106)
T ss_dssp             SHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHhCC
Confidence            99999999999975

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=7e-22  Score=132.25  Aligned_cols=86  Identities=22%  Similarity=0.400  Sum_probs=81.6

Q ss_pred             CCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCC--CCcccccCccc
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE--KPYACGQCAFR  184 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~--k~~~C~~C~k~  184 (200)
                      .++++|.|++|++.|.+ ...|..|      + ++|.++++|.|+.|++.|.....|..|+++|.++  ++|.|++|++.
T Consensus         3 ~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~   74 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRD-VYHLNRH------K-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKG   74 (95)
T ss_dssp             CCCSCEECSSSCCEESS-SHHHHHH------H-HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCC
T ss_pred             CCCCCeECCCCCCccCC-hHHHHHH------H-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccch
Confidence            46789999999999999 9999999      9 9999999999999999999999999999999997  99999999999


Q ss_pred             ccCHHHHHHHHh-hhcC
Q psy7453         185 SASVAGLHYHLK-KTYH  200 (200)
Q Consensus       185 f~~~~~L~~H~~-~h~g  200 (200)
                      |.+...|..|++ +|.|
T Consensus        75 f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           75 FSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             BSSHHHHHHHHHHTSCC
T ss_pred             hCCHHHHHHHHHHhcCC
Confidence            999999999996 6765

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.85  E-value=9.1e-22  Score=120.96  Aligned_cols=57  Identities=23%  Similarity=0.418  Sum_probs=51.3

Q ss_pred             CCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       144 ~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .||||.|++||+.|...+.|..|+++|+|++||.|++||++|.+.+.|..|+++|+|
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            478999999999999999999999999999999999999999999999999999887

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=3.7e-22  Score=145.18  Aligned_cols=115  Identities=19%  Similarity=0.339  Sum_probs=99.6

Q ss_pred             CCCcccccccccccccccccccccccCcccCCCCCCCCccccc-----ChhhhccCHHHHHhchhhhhhhhhcCCCCCce
Q psy7453          74 QNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIY-----CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKF  148 (200)
Q Consensus        74 ~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~-----C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~  148 (200)
                      |-+|.|+.|++.|.+...|..+..-    ...+.++++|.|++     |++.|.+ ...|..|      + ++|.+++||
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~----~h~h~~~~~~~C~~c~C~~c~~~f~~-~~~l~~H------~-~~h~~~~~~   68 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINS----EHIHGERKEFVCHWGGCSRELRPFKA-QYMLVVH------M-RRHTGEKPH   68 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHH----HTSSSCSSCCCCCBTTCTTTTCCCSS-HHHHHHH------T-HHHHCCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHh----hccCCCCcceeCCCCCccchhhhhhh-HHHHHHH------H-HhcCCCCCc
Confidence            3578999999999999988754100    01345778998875     3499999 9999999      9 999999999


Q ss_pred             ecCc--cCcccCChHHHHHHHHHcCCCCCccccc--CcccccCHHHHHHHH-hhhcC
Q psy7453         149 VCYA--CDYFSYNIGCMRSHIRTHTGEKPYACGQ--CAFRSASVAGLHYHL-KKTYH  200 (200)
Q Consensus       149 ~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~-~~h~g  200 (200)
                      .|++  |++.|.....|..|+++|+++++|.|++  |++.|.+...|..|+ ++|+|
T Consensus        69 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~  125 (155)
T 2gli_A           69 KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN  125 (155)
T ss_dssp             CCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             cCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            9985  9999999999999999999999999998  999999999999999 77865

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=2.1e-21  Score=133.45  Aligned_cols=86  Identities=22%  Similarity=0.321  Sum_probs=82.0

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCccc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR  184 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~  184 (200)
                      .+.++++|.| .|++.|.+ ...|..|      + +.|.++++|.|++|++.|.....|..|+++|.++++|.|++|++.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTH-KSQRDRH------M-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR   74 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESS-HHHHHHH------H-HHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCE
T ss_pred             CCCCCCCEec-cCCCccCC-HHHHHHH------H-HHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcch
Confidence            3457899999 99999999 9999999      9 999999999999999999999999999999999999999999999


Q ss_pred             ccCHHHHHHHHhhhc
Q psy7453         185 SASVAGLHYHLKKTY  199 (200)
Q Consensus       185 f~~~~~L~~H~~~h~  199 (200)
                      |.+...|..|+++|+
T Consensus        75 f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           75 FMWRDSFHRHVTSCT   89 (110)
T ss_dssp             ESCHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHcc
Confidence            999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.83  E-value=8.3e-21  Score=128.04  Aligned_cols=85  Identities=28%  Similarity=0.571  Sum_probs=81.4

Q ss_pred             CCCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecC--ccCcccCChHHHHHHHHHcCCCCCcccccCcc
Q psy7453         108 NTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF  183 (200)
Q Consensus       108 ~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k  183 (200)
                      .+++|.|+.  |++.|.. ...|..|      + +.|.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++
T Consensus        12 ~~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   83 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTK-SSHLKAH------L-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNR   83 (100)
T ss_dssp             SCCCEECCSSSCCCEESC-HHHHHHH------H-HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCC
T ss_pred             cCcceEcCCCCCCCcccC-HHHHHHH------H-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcC
Confidence            567899996  9999999 9999999      9 999999999996  69999999999999999999999999999999


Q ss_pred             cccCHHHHHHHHhhhcC
Q psy7453         184 RSASVAGLHYHLKKTYH  200 (200)
Q Consensus       184 ~f~~~~~L~~H~~~h~g  200 (200)
                      .|.+...|..|+++|+|
T Consensus        84 ~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           84 SFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             BCSSHHHHHHHHHHHCC
T ss_pred             ccCCHHHHHHHHHHhCC
Confidence            99999999999999986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.83  E-value=8.8e-21  Score=125.23  Aligned_cols=83  Identities=25%  Similarity=0.540  Sum_probs=79.6

Q ss_pred             CCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecC--ccCcccCChHHHHHHHHHcCCCCCcccccCccc
Q psy7453         109 TFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR  184 (200)
Q Consensus       109 ~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~  184 (200)
                      .++|.|+.  |++.|.. ...|..|      + +.|.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.
T Consensus         3 ~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTK-SSHLKAH------L-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             CCCEECCSTTTCCEESS-HHHHHHH------H-TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCeeCCCCCCCCcCCC-HHHHHHH------H-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            56899999  9999999 9999999      9 999999999997  699999999999999999999999999999999


Q ss_pred             ccCHHHHHHHHhhhc
Q psy7453         185 SASVAGLHYHLKKTY  199 (200)
Q Consensus       185 f~~~~~L~~H~~~h~  199 (200)
                      |.+...|..|+++|.
T Consensus        75 f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           75 FSRSDHLALHMKRHF   89 (89)
T ss_dssp             ESSHHHHHHHGGGGC
T ss_pred             cCCHHHHHHHHHhhC
Confidence            999999999999984

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=1.1e-20  Score=131.38  Aligned_cols=85  Identities=24%  Similarity=0.436  Sum_probs=81.8

Q ss_pred             CCCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecC--ccCcccCChHHHHHHHHHcCCCCCcccccCcc
Q psy7453         108 NTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF  183 (200)
Q Consensus       108 ~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k  183 (200)
                      ++++|.|++  |++.|.+ ...|..|      + ++|.++++|.|+  .|++.|.....|..|+++|.++++|.|++|++
T Consensus         3 ~~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   74 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFK-LSHLQMH------S-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQR   74 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSC-HHHHHHH------H-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             CCeeeeCCCCCCcchhCC-HHHHHHH------H-HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCc
Confidence            678999997  9999999 9999999      9 899999999999  79999999999999999999999999999999


Q ss_pred             cccCHHHHHHHHhhhcC
Q psy7453         184 RSASVAGLHYHLKKTYH  200 (200)
Q Consensus       184 ~f~~~~~L~~H~~~h~g  200 (200)
                      .|.+...|..|+++|+|
T Consensus        75 ~f~~~~~l~~H~~~h~~   91 (119)
T 2jp9_A           75 KFSRSDHLKTHTRTHTG   91 (119)
T ss_dssp             EESCHHHHHHHHHHHHT
T ss_pred             hhCCHHHHHHHHHHhcC
Confidence            99999999999999975

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=1.4e-20  Score=128.83  Aligned_cols=85  Identities=24%  Similarity=0.246  Sum_probs=74.3

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCccc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR  184 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~  184 (200)
                      .+.++++|.|++|++.|.. ...|..|      + ++|  +++|.|++|++.|.....|..|++ |+++++|+|++|++.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~   78 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSS-LLEQGSH------E-RLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRT   78 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSS-HHHHHHH------H-HHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEE
T ss_pred             ccCCCcCeECCCCCCccCC-HHHHHHH------H-HHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccch
Confidence            3457889999999999999 9999999      8 777  478999999999999999999985 999999999999999


Q ss_pred             ccCHHHHHHHHh-hhcC
Q psy7453         185 SASVAGLHYHLK-KTYH  200 (200)
Q Consensus       185 f~~~~~L~~H~~-~h~g  200 (200)
                      |.+...|..|++ +|+|
T Consensus        79 f~~~~~L~~H~~~~H~~   95 (107)
T 1wjp_A           79 FKSSFSIWRHQVEVHNQ   95 (107)
T ss_dssp             CSSHHHHHHHHHHTSCC
T ss_pred             hCCHHHHHHHHHHHcCC
Confidence            999999999997 6754

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.81  E-value=4e-21  Score=133.10  Aligned_cols=87  Identities=20%  Similarity=0.127  Sum_probs=65.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhc--CCCCCce-ecCccCccc--CChHHHHHHHHHcCCCCCcccc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRT--DPFRHKF-VCYACDYFS--YNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~--h~~~k~~-~C~~C~~~f--~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      .+.++++|.|++|++.|.+ ...|..|      + ++  |.+++++ .|++|++.|  .....|..|+++|++++||.|+
T Consensus        13 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A           13 IFTGASKFRCKDCSAAYDT-LVELTVH------M-NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCSEEBSSSSCEESS-HHHHHHH------H-HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             eeCCCCCEECCccCchhcC-HHHHHHH------H-HHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            3446777888888888887 7888888      6 66  6656554 378888777  7777777887778888888888


Q ss_pred             cCcccccCHHHHHHHHhhhc
Q psy7453         180 QCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       180 ~C~k~f~~~~~L~~H~~~h~  199 (200)
                      +|++.|.+...|..|+++|+
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTT
T ss_pred             CCCCccCCHHHHHHHHHHhC
Confidence            88888888888888877764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=5.4e-20  Score=128.59  Aligned_cols=86  Identities=16%  Similarity=0.250  Sum_probs=81.6

Q ss_pred             CCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHH---cCCCCCcccccCcc
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRT---HTGEKPYACGQCAF  183 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~---H~~~k~~~C~~C~k  183 (200)
                      .++++|.|++|++.|.+ ...|..|      + ++|.+++||.|+.|++.|.....|..|++.   |.++++|.|++|++
T Consensus         3 ~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~   74 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLS-KYYLKVH------N-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQE   74 (124)
T ss_dssp             CCCSSCCCTTTCCCCSS-HHHHHHH------H-HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCC
T ss_pred             CCCCCCCCCCCCCcCCC-HHHHHHH------H-HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCC
Confidence            46789999999999999 9999999      9 999999999999999999999999999996   57899999999999


Q ss_pred             cccCHHHHHHHHhhhcC
Q psy7453         184 RSASVAGLHYHLKKTYH  200 (200)
Q Consensus       184 ~f~~~~~L~~H~~~h~g  200 (200)
                      .|.+...|..|+++|+|
T Consensus        75 ~f~~~~~l~~H~~~h~~   91 (124)
T 2dlq_A           75 TFRRRMELRLHMVSHTG   91 (124)
T ss_dssp             EESSHHHHHHHHHHHSS
T ss_pred             ccCCHHHHHHHHHHcCC
Confidence            99999999999999975

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.80  E-value=3.6e-21  Score=127.29  Aligned_cols=82  Identities=16%  Similarity=0.126  Sum_probs=78.0

Q ss_pred             CCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCH
Q psy7453         109 TFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASV  188 (200)
Q Consensus       109 ~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~  188 (200)
                      ++||.|++|++.|.. ...|..|      + ++|.+++||.|+.|++.|.....|..|+++|.+ .+|.|+.|++.|.+.
T Consensus         1 ek~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~   71 (88)
T 1llm_C            1 MKPFQCRICMRNFSR-SDHLTTH------I-RTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKN   71 (88)
T ss_dssp             CCCEECTTTCCEESC-HHHHHHH------H-HHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCC-HHHHHHH------H-HHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHH
Confidence            579999999999999 9999999      9 999999999999999999999999999999885 889999999999999


Q ss_pred             HHHHHHHhhhc
Q psy7453         189 AGLHYHLKKTY  199 (200)
Q Consensus       189 ~~L~~H~~~h~  199 (200)
                      ..|..|++.++
T Consensus        72 ~~L~~H~~~~h   82 (88)
T 1llm_C           72 YHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhHHHHHHHH
Confidence            99999998754

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.79  E-value=2.9e-20  Score=114.17  Aligned_cols=58  Identities=17%  Similarity=0.302  Sum_probs=55.9

Q ss_pred             CCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         109 TFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       109 ~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      ||||.|++||+.|.. .+.|..|      + ++|++++||.|++||+.|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~-~~~L~~H------~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRD-ASGLSRH------R-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESS-HHHHHHH------H-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCC-HHHHHHH------H-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            799999999999999 9999999      9 99999999999999999999999999999999975

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=8.9e-20  Score=124.38  Aligned_cols=93  Identities=15%  Similarity=0.218  Sum_probs=84.0

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      ..++++|.|+.|++.|.....|..+       ...+.++++|.|++|++.|.. ...|..|      + ++|.++++|.|
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C   76 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIH-------ERTHTDERPYTCDICHKAFRR-QDHLRDH------R-YIHSKEKPFKC   76 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHH-------HHHHCCSCCCBCSSSCCBCSC-HHHHHHH------G-GGSCCCCTTSC
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHH-------HHHcCCCCCcCCCCccchhCC-HHHHHHH------H-HHhCCCCCeEC
Confidence            4567899999999999999888654       233457889999999999999 9999999      9 99999999999


Q ss_pred             CccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         151 YACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       151 ~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      ++|++.|.....|..|+++|.++++|.+
T Consensus        77 ~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           77 QECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             SSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            9999999999999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.78  E-value=1.6e-19  Score=126.37  Aligned_cols=84  Identities=23%  Similarity=0.369  Sum_probs=77.9

Q ss_pred             CCCCcccc--cChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc--Ccc
Q psy7453         108 NTFSPFCI--YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ--CAF  183 (200)
Q Consensus       108 ~~~~~~C~--~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~--C~k  183 (200)
                      ++++|.|+  .|++.|.+ ...|..|      + ++| ++++|.|+.|++.|.....|..|+++|.++++|.|+.  |++
T Consensus         2 ~~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~   72 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRD-NSAMRKH------L-HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK   72 (124)
T ss_dssp             ---CEECCSTTCCCEESS-HHHHHHH------H-GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCC
T ss_pred             CCCcccCCCCCCcCccCC-HHHHHHH------H-HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcC
Confidence            35789999  89999999 9999999      8 889 8899999999999999999999999999999999986  999


Q ss_pred             cccCHHHHHHHHhhhcC
Q psy7453         184 RSASVAGLHYHLKKTYH  200 (200)
Q Consensus       184 ~f~~~~~L~~H~~~h~g  200 (200)
                      .|.+...|..|+++|+|
T Consensus        73 ~f~~~~~l~~H~~~h~~   89 (124)
T 1ubd_C           73 RFSLDFNLRTHVRIHTG   89 (124)
T ss_dssp             EESCHHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHhCC
Confidence            99999999999999875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.78  E-value=5.1e-20  Score=133.92  Aligned_cols=116  Identities=16%  Similarity=0.161  Sum_probs=99.1

Q ss_pred             hcccccccccchhhhhhhhhhhcCCCCCCC--------cccccccccccccccccccccccCcccCCCCCCCCccccc--
Q psy7453          47 TAQLVLMSLDQILNLNLSVLLVTTIPTQNH--------SLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIY--  116 (200)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~--  116 (200)
                      ....+.+.|.....|..|+...  |.++.+        |.|+.|++.|.....|..+       ...+.++++|.|++  
T Consensus        27 ~C~~C~~~f~~~~~L~~H~~~~--H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~~~   97 (155)
T 2rpc_A           27 PKKSCDRTFSTMHELVTHVTME--HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH-------IRVHTGEKPFPCPFPG   97 (155)
T ss_dssp             SCCCCCCCBSSHHHHHHHHHTT--TSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHH-------THHHHCCCSEECSCTT
T ss_pred             ccccCCcccCCHHHHHHHHHhh--cCCCcccCCccccccCCCCcccccCCHHHHHHH-------HHhcCCCCcccCCcCC
Confidence            4456778899888888887752  444443        8999999999999888654       23345789999998  


Q ss_pred             ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc--cCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         117 CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       117 C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      |++.|.+ ...|..|      + ++|.+++||.|++  |++.|.....|..|+++|++++||+|.
T Consensus        98 C~~~f~~-~~~L~~H------~-~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           98 CGKIFAR-SENLKIH------K-RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             TCCEESC-HHHHHHH------H-TTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCccCC-HHHHHHH------H-HhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999 9999999      9 9999999999997  999999999999999999999999986

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.3e-19  Score=120.13  Aligned_cols=91  Identities=23%  Similarity=0.358  Sum_probs=82.7

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      +.++++|.|+.|++.|.+...|..+       ...+.++++|.|++|++.|.. ...|..|      + ++|.++++|.|
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C   67 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTH-------MRCHTGVKPYKCKTCDYAAAD-SSSLNKH------L-RIHSDERPFKC   67 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHH-------GGGCCCCCSEECSSSCCEESS-HHHHHHH------H-HHSCCCCCEEC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHH-------HHhcCCCCCEeCCCCCCccCC-HHHHHHH------H-HHhCCCCCccC
Confidence            5678999999999999999988765       334557889999999999999 9999999      9 99999999999


Q ss_pred             CccCcccCChHHHHHHHHHcCCCCCc
Q psy7453         151 YACDYFSYNIGCMRSHIRTHTGEKPY  176 (200)
Q Consensus       151 ~~C~~~f~~~~~l~~H~~~H~~~k~~  176 (200)
                      ++|++.|.....|..|+++|+++++.
T Consensus        68 ~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           68 QICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             SSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             CCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999998764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.77  E-value=2.4e-19  Score=117.06  Aligned_cols=78  Identities=21%  Similarity=0.376  Sum_probs=75.2

Q ss_pred             Cccc--ccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc--cCcccCChHHHHHHHHHcCCCCCccccc---Ccc
Q psy7453         111 SPFC--IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYACGQ---CAF  183 (200)
Q Consensus       111 ~~~C--~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~~---C~k  183 (200)
                      ||.|  +.|++.|.. ...|..|      + ++|.+++||.|+.  |++.|.....|..|+++|++   |.|+.   |++
T Consensus         1 p~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~   69 (85)
T 2j7j_A            1 MYVCHFENCGKAFKK-HNQLKVH------Q-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSF   69 (85)
T ss_dssp             CEECCSTTCCCEESS-HHHHHHH------H-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCC
T ss_pred             CccCCCCCCCcccCC-HHHHHHH------H-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCC
Confidence            6899  999999999 9999999      9 9999999999998  99999999999999999998   99999   999


Q ss_pred             cccCHHHHHHHHhhhc
Q psy7453         184 RSASVAGLHYHLKKTY  199 (200)
Q Consensus       184 ~f~~~~~L~~H~~~h~  199 (200)
                      .|.+...|..|+++|+
T Consensus        70 ~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           70 VGKTWTLYLKHVAECH   85 (85)
T ss_dssp             EESSHHHHHHHHHHCC
T ss_pred             ccCCHHHHHHHHHhcC
Confidence            9999999999999985

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=6.5e-19  Score=113.75  Aligned_cols=72  Identities=18%  Similarity=0.362  Sum_probs=67.9

Q ss_pred             CCCCCccccc--ChhhhccCHHHHHhchhhhhhhhh-cCCCCCceecCc--cCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         107 NNTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIR-TDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       107 ~~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~-~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      .++++|.|+.  |++.|.+ ...|..|      + + .|.++++|.|++  |++.|.....|..|+++|+++++|.|++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~-~~~L~~H------~-~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   74 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSN-RQYLNHH------K-KYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS   74 (79)
T ss_dssp             SCCSSEECSSTTTCCEESS-HHHHHHH------H-HHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSS
T ss_pred             CCCCCccCCCCCCcCccCC-HHHHHHH------H-HHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCC
Confidence            4678899987  9999999 9999999      8 7 899999999999  99999999999999999999999999999


Q ss_pred             ccccc
Q psy7453         182 AFRSA  186 (200)
Q Consensus       182 ~k~f~  186 (200)
                      |+.|.
T Consensus        75 ~k~F~   79 (79)
T 2dlk_A           75 GPSSG   79 (79)
T ss_dssp             SCCCC
T ss_pred             CCCCC
Confidence            99984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.76  E-value=9e-20  Score=128.82  Aligned_cols=112  Identities=16%  Similarity=0.134  Sum_probs=87.7

Q ss_pred             CCCCCCCccccccccc--ccccccccccccccCcccCCCCCCCCcccccChhhhc------cCHHHHHhchhhhhhhhhc
Q psy7453          70 TIPTQNHSLCKHCHSQ--LSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLS------TNLNELIEHCRTCKSMIRT  141 (200)
Q Consensus        70 ~~~~~~~~~C~~C~~~--f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~------~~~~~l~~H~~~~~~~~~~  141 (200)
                      .++|.++|.|...+..  |.....+..        ......++++.|++|++.|.      . ...|..|      +  .
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~--------~~l~~~~~~~~c~~~~~~~~~~~~~~~-~~~l~~h------~--~   68 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVTLEELKRY--------HQLTPEQKRLIRAIVKTLIHNPQLLDE-SSYLYRL------L--A   68 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECCHHHHHHH--------TTSCHHHHHHHHHHHHHHHHCGGGTTT-HHHHHHH------H--H
T ss_pred             hcccccccccccCCeeeeecHHhhhcc--------ccCChhhCcccchhhhcccCCCcccCC-HHHHHHH------H--H
Confidence            3778899988765433  322221100        11122456788998888877      4 5667777      4  5


Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |++++||.|++||+.|.....|..|+++|  ++||.|++||+.|.+...|..|+++|+|
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            88899999999999999999999999999  8999999999999999999999999987

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=3e-19  Score=122.13  Aligned_cols=91  Identities=16%  Similarity=0.202  Sum_probs=82.0

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      |.++++|.|+.|++.|.....|..+.       ..  .+++|.|++|++.|.. ...|..|      + + |.+++||.|
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~-------~~--H~~~~~C~~C~~~f~~-~~~l~~H------~-~-H~~~~~~~C   72 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHE-------RL--CRNAAVCPYCSLRFFS-PELKQEH------E-S-KCEYKKLTC   72 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHH-------HH--HHHSBCCTTTCCCBSS-HHHHHHH------H-H-HCSTGGGEE
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHH-------HH--CCCCccCCCCCCccCC-HHHHHHH------H-H-cCCCCCccC
Confidence            88999999999999999999886542       11  1468999999999999 9999999      8 6 999999999


Q ss_pred             CccCcccCChHHHHHHHH-HcCCCCCcccc
Q psy7453         151 YACDYFSYNIGCMRSHIR-THTGEKPYACG  179 (200)
Q Consensus       151 ~~C~~~f~~~~~l~~H~~-~H~~~k~~~C~  179 (200)
                      ++|++.|.....|..|++ +|+++++|.|.
T Consensus        73 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           73 LECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             GGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             ccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            999999999999999997 89999999885

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=2.3e-19  Score=124.13  Aligned_cols=106  Identities=10%  Similarity=0.030  Sum_probs=87.1

Q ss_pred             hhhhhhhhhhcCCCCCCCcccccccccccccccccccccccCcccCCCCCCCC-cccccChhhh--ccCHHHHHhchhhh
Q psy7453          59 LNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFS-PFCIYCKAVL--STNLNELIEHCRTC  135 (200)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~-~~C~~C~~~f--~~~~~~l~~H~~~~  135 (200)
                      ..|..|+..   |.++++|.|+.|++.|.....|..+..-     ....++++ +.|++|++.|  .. ...|..|    
T Consensus         5 ~~l~~H~~~---H~~~~~~~C~~C~k~f~~~~~L~~H~~~-----~~h~~~~~~~~C~~C~~~f~f~~-~~~l~~H----   71 (115)
T 2dmi_A            5 SSGKLYGSI---FTGASKFRCKDCSAAYDTLVELTVHMNE-----TGHYRDDNHETDNNNPKRWSKPR-KRSLLEM----   71 (115)
T ss_dssp             CCCCCCCCC---CCCCCSEEBSSSSCEESSHHHHHHHHHH-----TCCCBCSCCCCCCCCCSCCSSCC-CCCCCCC----
T ss_pred             hhhhhheee---eCCCCCEECCccCchhcCHHHHHHHHHH-----hCccccCCCccCCCCCccccccc-HHHHHHH----
Confidence            456677766   8999999999999999999988764210     11234454 4599999999  88 8999999    


Q ss_pred             hhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         136 KSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       136 ~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                        + ++|.+++||.|++|++.|.....|..|+++|.......++.
T Consensus        72 --~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           72 --E-GKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             --C-CSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred             --h-hccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence              9 99999999999999999999999999999988776665543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.74  E-value=1.8e-19  Score=119.13  Aligned_cols=88  Identities=19%  Similarity=0.280  Sum_probs=75.6

Q ss_pred             CCCCcccc--cccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453          73 TQNHSLCK--HCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus        73 ~~~~~~C~--~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      ++++|.|+  .|++.|.....|..+       ...+.++++|.|+.|++.|.+ ...|..|      + ++|.+++||.|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C   65 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRH-------IRIHTGQKPFQCRICMRNFSR-SDHLTTH------I-RTHTGEKPFAC   65 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHH-------HHHHHCCCCEECTTTCCEESC-HHHHHHH------H-HHHHCCCCEEC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHH-------HHHhCCCCCccCCCCCcccCC-HHHHHHH------H-HHcCCCCCccC
Confidence            46899998  699999999988654       223447789999999999999 9999999      9 99999999999


Q ss_pred             CccCcccCChHHHHHHHHHcCCCCC
Q psy7453         151 YACDYFSYNIGCMRSHIRTHTGEKP  175 (200)
Q Consensus       151 ~~C~~~f~~~~~l~~H~~~H~~~k~  175 (200)
                      +.|++.|...+.|..|+++|+++++
T Consensus        66 ~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           66 DICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             TTTCCEESSHHHHHHHHGGGGC---
T ss_pred             CCCCchhCCHHHHHHHHHHhcccCC
Confidence            9999999999999999999999863

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.3e-18  Score=107.38  Aligned_cols=61  Identities=26%  Similarity=0.425  Sum_probs=57.9

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++|++++||.|++|++.|.....|..|+++|.++++|+|++|++.|.+...|..|+++|+|
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            7899999999999999999999999999999999999999999999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=8.2e-19  Score=113.82  Aligned_cols=82  Identities=20%  Similarity=0.280  Sum_probs=73.3

Q ss_pred             CcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCc
Q psy7453          76 HSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY  155 (200)
Q Consensus        76 ~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~  155 (200)
                      ||.|+.|++.|.+...|...       ...+.++++|.|+.|++.|.+ ...|..|      + +.|.++++|.|+.|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~   65 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTH-------LLIHSDTRPYPCQYCGKRFHQ-KSDMKKH------T-FIHTGEKPHKCQVCGK   65 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHH-------HHHHHTCCCEECSSSCCEESS-HHHHHHH------H-HHHHTCCCEECTTTSC
T ss_pred             CccCCCCcccccCchhHHHH-------HHHcCCCCCeeCCcCChhhCC-HHHHHHH------H-HHhcCCCCCcCCCcch
Confidence            68999999999999888654       223347889999999999999 9999999      9 9999999999999999


Q ss_pred             ccCChHHHHHHHHHcCC
Q psy7453         156 FSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       156 ~f~~~~~l~~H~~~H~~  172 (200)
                      .|...+.|..|+++|+|
T Consensus        66 ~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           66 AFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             EESSHHHHHHHHHHHC-
T ss_pred             hhCChHHHHHHHHhhCC
Confidence            99999999999999975

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.5e-17  Score=106.97  Aligned_cols=65  Identities=23%  Similarity=0.322  Sum_probs=60.9

Q ss_pred             CCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       106 ~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      ..++++|.|++|++.|.. ...|..|      + ++|.+++||.|++|++.|.....|..|+++|++++||+|
T Consensus        13 ~~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSH-SSDLSKH------R-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSC-HHHHHHH------H-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCC-HHHHHHH------H-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            347889999999999999 9999999      9 999999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=6.5e-18  Score=114.70  Aligned_cols=70  Identities=19%  Similarity=0.418  Sum_probs=64.4

Q ss_pred             CCCCCCcccccChhhhccCHHHHHhchhhhhhhhh-cC---CCCCceecCccCcccCChHHHHHH-HHHcCCCCCccccc
Q psy7453         106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIR-TD---PFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYACGQ  180 (200)
Q Consensus       106 ~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~-~h---~~~k~~~C~~C~~~f~~~~~l~~H-~~~H~~~k~~~C~~  180 (200)
                      ..+++||.|++|++.|.. ++.|..|      + + +|   .+++||.|++||+.|...+.|..| +++|+|++||.|.+
T Consensus        13 ~~gekpy~C~~Cgk~F~~-~~~L~~H------~-r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPD-LNMFTFH------V-DSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECSSCSCEESC-HHHHHHH------H-HHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCCCCCCccCC-HHHHHHH------H-HhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            348899999999999999 9999999      8 6 59   678999999999999999999999 89999999999998


Q ss_pred             Ccc
Q psy7453         181 CAF  183 (200)
Q Consensus       181 C~k  183 (200)
                      +..
T Consensus        85 ~~~   87 (102)
T 2ghf_A           85 VKR   87 (102)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            643

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=5.8e-18  Score=112.95  Aligned_cols=89  Identities=15%  Similarity=0.303  Sum_probs=78.6

Q ss_pred             CCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCC--Cce
Q psy7453          71 IPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR--HKF  148 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~--k~~  148 (200)
                      .+++++|.|+.|++.|.+...|..+       ...+.++++|.|++|++.|.+ ...|..|      + +.|.++  ++|
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~~   66 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRH-------KLSHSGEKPYSCPVCGLRFKR-KDRMSYH------V-RSHDGSVGKPY   66 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHH-------HHHSCSSCSEECSSSCCEESC-HHHHHHH------H-HHHCCCCCSSB
T ss_pred             CCCCCCeECCCCCCccCChHHHHHH-------HHhcCCCCCCcCCCCCCccCC-HHHHHHH------H-HHhcCCCCCce
Confidence            4678999999999999999988754       233457889999999999999 9999999      8 899887  999


Q ss_pred             ecCccCcccCChHHHHHHHH-HcCCCC
Q psy7453         149 VCYACDYFSYNIGCMRSHIR-THTGEK  174 (200)
Q Consensus       149 ~C~~C~~~f~~~~~l~~H~~-~H~~~k  174 (200)
                      .|+.|++.|.....|..|++ +|.++.
T Consensus        67 ~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           67 ICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             CCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             ECCCccchhCCHHHHHHHHHHhcCCCC
Confidence            99999999999999999986 788753

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.2e-17  Score=104.13  Aligned_cols=61  Identities=23%  Similarity=0.323  Sum_probs=58.2

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHH-c-CCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRT-H-TGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~-H-~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++|++++||.|+.|++.|.....|..|+++ | .++++|.|+.|++.|.+...|..|+++|+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            789999999999999999999999999998 7 689999999999999999999999999986

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1e-17  Score=112.67  Aligned_cols=72  Identities=17%  Similarity=0.328  Sum_probs=66.4

Q ss_pred             hhccCHHHHHhchhhhhhhhhcCCCCCceecCccCccc-CChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHH-Hhh
Q psy7453         120 VLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFS-YNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYH-LKK  197 (200)
Q Consensus       120 ~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f-~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H-~~~  197 (200)
                      .|.. ...|..|      + +.|.++++|.|+.|++.| .....|..|+++| ++++|.|++||+.|.++..|..| +++
T Consensus        15 ~~~~-~~~~~~~------~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           15 VYAA-GSLEEQW------Y-LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMAN   85 (96)
T ss_dssp             SSCT-TCHHHHH------H-HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             CCCC-chHHHHH------H-HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHh
Confidence            5566 7888899      8 888899999999999999 9999999999999 99999999999999999999999 888


Q ss_pred             hcC
Q psy7453         198 TYH  200 (200)
Q Consensus       198 h~g  200 (200)
                      |+|
T Consensus        86 H~~   88 (96)
T 2ctd_A           86 HNS   88 (96)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.70  E-value=1.6e-17  Score=100.46  Aligned_cols=57  Identities=35%  Similarity=0.632  Sum_probs=49.6

Q ss_pred             CCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         144 FRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       144 ~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |++||.|+.|++.|.....|..|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=2.1e-18  Score=116.32  Aligned_cols=69  Identities=20%  Similarity=0.321  Sum_probs=58.2

Q ss_pred             HHHHHhchhhhhhhhhcCCCCCceecCccCcccC-ChHHHHHHHHHcCC-CCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         125 LNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSY-NIGCMRSHIRTHTG-EKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       125 ~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~-~~~~l~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ...+..|      + ++|.++++|.|++|++.|. ....|..|+++|++ +++|.|++|++.|.++..|..|+++|+|
T Consensus         9 ~~~~~~h------~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            9 GGPEEQW------Q-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCSCSHH------H-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCcHHHH------H-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            4456677      7 8888888888888888888 88888888888888 8888888888888888888888888875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.2e-17  Score=106.18  Aligned_cols=66  Identities=27%  Similarity=0.405  Sum_probs=60.3

Q ss_pred             HHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHH-HcCCC-CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGE-KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       128 l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~-k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |.+|      + ++|++++||.|++|++.|.....|..|++ .|.++ ++|+|++|++.|.+...|..|+++|++
T Consensus         3 ~~~H------~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSS------G-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCC------C-CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCcc------c-cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4568      8 99999999999999999999999999997 68875 899999999999999999999998764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.1e-17  Score=103.48  Aligned_cols=58  Identities=28%  Similarity=0.571  Sum_probs=29.7

Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |+++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHh
Confidence            4444555555555555555555555555555555555555555555555555555443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=8.4e-18  Score=115.30  Aligned_cols=87  Identities=15%  Similarity=0.204  Sum_probs=78.5

Q ss_pred             CCCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCcee
Q psy7453          70 TIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV  149 (200)
Q Consensus        70 ~~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~  149 (200)
                      .|+++++|.| .|++.|.....|..+       ...+.++++|.|++|++.|.+ ...|..|      + ++|.++++|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~   67 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRH-------MSMHLGLRPYGCGVCGKKFKM-KHHLVGH------M-KIHTGIKPYE   67 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHH-------HHHHSCCCSEECTTTSCEESS-SHHHHHH------H-TTTCCCCCEE
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHH-------HHHcCCCcCccCCCCCcccCC-HHHHHHH------H-HHcCCCCCee
Confidence            4889999999 999999999988654       233457789999999999999 9999999      9 9999999999


Q ss_pred             cCccCcccCChHHHHHHHHHcCC
Q psy7453         150 CYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       150 C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      |++|++.|.....|..|+++|..
T Consensus        68 C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           68 CNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CSSSCCEESCHHHHHHHHHHHHH
T ss_pred             CCCCcchhcCHHHHHHHHHHccc
Confidence            99999999999999999999853

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.68  E-value=5.9e-17  Score=103.32  Aligned_cols=61  Identities=25%  Similarity=0.431  Sum_probs=36.9

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCc
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  176 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~  176 (200)
                      ++++|.|+.|++.|.. ...|..|      + ++|.++++|.|++|++.|.....|..|+++|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~-~~~l~~H------~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRY-KGNLASH------K-TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSC-HHHHHHH------H-HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCC-HHHHHHH------H-HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4556666666666666 6666666      5 5566666666666666666666666666666665554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=5.7e-17  Score=106.39  Aligned_cols=60  Identities=18%  Similarity=0.285  Sum_probs=42.4

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHh-hhc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLK-KTY  199 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~  199 (200)
                      ..+.++++|.|++||+.|.....|..|+++|++++||+|++|+++|.++..|.+|++ +|+
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            445556677777777777777777777777777777777777777777777777753 454

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=5.7e-17  Score=103.39  Aligned_cols=61  Identities=28%  Similarity=0.435  Sum_probs=58.0

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..+.++++|.|+.|++.|.....|..|+++|+++++|+|++|++.|.+...|..|+++|+|
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   70 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG   70 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence            4677899999999999999999999999999999999999999999999999999999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.1e-16  Score=101.70  Aligned_cols=68  Identities=24%  Similarity=0.425  Sum_probs=60.2

Q ss_pred             HHHHhchhhhhhhhhcCCCCCceecC--ccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         126 NELIEHCRTCKSMIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       126 ~~l~~H~~~~~~~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      ..+..|      ...+|.++++|.|+  .|++.|.....|..|+++|.++++|.|++||+.|.+...|..|+++|+
T Consensus         4 ~~~~~~------~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNL------LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CT------TSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccch------hhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            345566      65789999999997  599999999999999999999999999999999999999999999985

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.1e-16  Score=104.55  Aligned_cols=74  Identities=16%  Similarity=0.158  Sum_probs=61.6

Q ss_pred             CCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCC----CceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR----HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       104 ~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~----k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      ..+.++++|.|++|++.|.. ...|.+|      + +.|.++    ++|.|++|++.|.....|..|+++|++++++.|.
T Consensus         8 ~~H~~~k~~~C~~C~~~f~~-~~~l~~H------~-~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A            8 RTHTGEKPYACSHCDKTFRQ-KQLLDMH------F-KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             TTCCCCCCEECSSSSCEESS-HHHHHHH------H-HHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             ceecCCCCCcCCCCCCccCC-HHHHHHH------H-HHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            34557888999999999999 8899999      7 655543    7899999999999999999999999999999999


Q ss_pred             cCcccc
Q psy7453         180 QCAFRS  185 (200)
Q Consensus       180 ~C~k~f  185 (200)
                      .|+..|
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            888765

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.6e-16  Score=102.10  Aligned_cols=61  Identities=28%  Similarity=0.431  Sum_probs=58.6

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..+.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   71 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG   71 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence            5677899999999999999999999999999999999999999999999999999999986

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.5e-16  Score=102.21  Aligned_cols=66  Identities=14%  Similarity=0.210  Sum_probs=61.1

Q ss_pred             HHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCC----CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         128 LIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE----KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       128 l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~----k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |.+|      + ++|++++||.|++|++.|.....|..|+++|.++    ++|.|++|++.|.+...|..|+++|+|
T Consensus         3 ~~~H------~-~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   72 (86)
T 1x6h_A            3 SGSS------G-RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG   72 (86)
T ss_dssp             TTCC------S-TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             cccc------c-ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccC
Confidence            5678      8 9999999999999999999999999999987665    789999999999999999999999875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.63  E-value=3e-16  Score=94.71  Aligned_cols=54  Identities=33%  Similarity=0.696  Sum_probs=33.6

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ||.|+.|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+++|+|
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            456666666666666666666666666666666666666666666666666543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=3.2e-16  Score=100.81  Aligned_cols=56  Identities=18%  Similarity=0.326  Sum_probs=37.9

Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCC---CCCcccccCcccccCHHHHHHHHhh
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTG---EKPYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~---~k~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      |++++||.|++|++.|.....|..|+++|.+   +++|.|++|++.|.+...|..|++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHH
Confidence            5666667777777777777777777666664   6667777777777777777777643

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.62  E-value=1.3e-16  Score=104.91  Aligned_cols=83  Identities=18%  Similarity=0.284  Sum_probs=74.9

Q ss_pred             CCCccccc--ccccccccccccccccccCcccCCCCCCCCcccc--cChhhhccCHHHHHhchhhhhhhhhcCCCCCcee
Q psy7453          74 QNHSLCKH--CHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCI--YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV  149 (200)
Q Consensus        74 ~~~~~C~~--C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~--~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~  149 (200)
                      .++|.|+.  |++.|.....|..+       ...+.++++|.|+  .|++.|.+ ...|..|      + ++|.++++|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~   67 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAH-------LRTHTGEKPYHCDWDGCGWKFAR-SDELTRH------Y-RKHTGHRPFQ   67 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHH-------HTTSCSSCCEECCSTTTCCEESS-HHHHHHH------H-HHHHCCCCEE
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHH-------HHhcCCCCCcCCCCCCCCCccCC-HHHHHHH------H-HHcCCCCCcc
Confidence            56899999  99999999988765       3455678999997  59999999 9999999      9 9999999999


Q ss_pred             cCccCcccCChHHHHHHHHHcC
Q psy7453         150 CYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       150 C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |+.|++.|...+.|..|+++|.
T Consensus        68 C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           68 CQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCCCcccCCHHHHHHHHHhhC
Confidence            9999999999999999999884

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.61  E-value=1.8e-16  Score=106.57  Aligned_cols=87  Identities=16%  Similarity=0.277  Sum_probs=76.6

Q ss_pred             CCCCCCccccc--ccccccccccccccccccCcccCCCCCCCCcccc--cChhhhccCHHHHHhchhhhhhhhhcCCCCC
Q psy7453          71 IPTQNHSLCKH--CHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCI--YCKAVLSTNLNELIEHCRTCKSMIRTDPFRH  146 (200)
Q Consensus        71 ~~~~~~~~C~~--C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~--~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k  146 (200)
                      ....++|.|+.  |++.|.....|..+       ...+.++++|.|+  .|++.|.. ...|..|      + ++|.+++
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~~~   74 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAH-------LRTHTGEKPYKCTWEGCDWRFAR-SDELTRH------Y-RKHTGAK   74 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHH-------HHHHSCCCCEECCSSSCCCEESS-HHHHHHH------H-HHHTSCC
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHH-------HHHhCCCCCeeCCCCCCCCccCC-HHHHHHH------H-HHhCCCC
Confidence            34567899996  99999999988754       2334578899996  69999999 9999999      9 9999999


Q ss_pred             ceecCccCcccCChHHHHHHHHHcCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      +|.|++|++.|.....|..|+++|++
T Consensus        75 ~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           75 PFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CeECCCCcCccCCHHHHHHHHHHhCC
Confidence            99999999999999999999999975

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=6.3e-16  Score=94.33  Aligned_cols=55  Identities=33%  Similarity=0.510  Sum_probs=39.2

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHH-hhhcC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHL-KKTYH  200 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~g  200 (200)
                      +||.|+.|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+ ++|+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            46777777777777777777777777777777777777777777777775 45654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=6.2e-16  Score=97.46  Aligned_cols=64  Identities=17%  Similarity=0.287  Sum_probs=60.1

Q ss_pred             CCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcc
Q psy7453         106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA  177 (200)
Q Consensus       106 ~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~  177 (200)
                      +.++++|.|++|++.|.. ...|..|      + ++|.++++|.|++|++.|.....|..|+++|++++|..
T Consensus         4 ~~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSS-KAALRIH------E-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESS-HHHHHHH------H-GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCC-HHHHHHH------H-HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            347899999999999999 9999999      9 99999999999999999999999999999999998753

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=2e-15  Score=99.00  Aligned_cols=60  Identities=20%  Similarity=0.351  Sum_probs=55.9

Q ss_pred             CCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHH-HHcCCCC
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGEK  174 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~-~~H~~~k  174 (200)
                      ...++|.|++|++.|.+ +..|.+|      + ++|++++||.|++|++.|.....|.+|+ ++|++|.
T Consensus        24 ~~~~~h~C~~Cgk~F~~-~~~L~~H------~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPVCGESFAS-KGAQERH------L-RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTTSCCEESS-HHHHHHH------H-HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCCCCCCcCc-HHHHhhh------h-hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            36788999999999999 9999999      9 9999999999999999999999999997 4698875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2e-15  Score=102.36  Aligned_cols=61  Identities=20%  Similarity=0.431  Sum_probs=56.3

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHH-Hc---CCCCCcccccCcccccCHHHHHHH-HhhhcC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIR-TH---TGEKPYACGQCAFRSASVAGLHYH-LKKTYH  200 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~H---~~~k~~~C~~C~k~f~~~~~L~~H-~~~h~g  200 (200)
                      ..-+|++||.|+.||+.|...+.|..|++ +|   ++++||.|++||+.|.++..|..| +++|+|
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htg   76 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG   76 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTT
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCC
Confidence            45578999999999999999999999998 59   678999999999999999999999 899986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.8e-15  Score=94.94  Aligned_cols=63  Identities=19%  Similarity=0.276  Sum_probs=58.8

Q ss_pred             CCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       104 ~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      ..+.++++|.|++|++.|.. ...|..|      + ++|.+++||.|++|++.|.....|..|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSR-SSILVQH------Q-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESS-HHHHHHH------H-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCC-HHHHHHH------H-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            34568899999999999999 9999999      9 99999999999999999999999999999998864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.56  E-value=2.7e-15  Score=90.44  Aligned_cols=56  Identities=20%  Similarity=0.384  Sum_probs=54.1

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      ||.|++|++.|.. ...|..|      + ++|.+++||.|+.|++.|...+.|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKK-PSMLKKH------I-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSS-HHHHHHH------H-HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCC-HHHHHHH------H-HhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6899999999999 9999999      9 99999999999999999999999999999999876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.56  E-value=1.5e-15  Score=91.66  Aligned_cols=57  Identities=25%  Similarity=0.444  Sum_probs=50.7

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      ++++|.|++|++.|.+ ...|..|      + ++|.+++||.|+.|++.|.....|..|+++|.+
T Consensus         1 g~~~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRS-NYYLNIH------L-RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSC-HHHHHHH------H-HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCC-hHHHHHH------H-HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            4689999999999999 9999999      9 999999999999999999999999999999864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.55  E-value=3.9e-15  Score=97.94  Aligned_cols=56  Identities=32%  Similarity=0.478  Sum_probs=53.7

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+||.|++|++.|.....|..|+++|++++||.|+.|++.|.+...|..|+++|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            57999999999999999999999999999999999999999999999999998863

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=7.6e-15  Score=97.68  Aligned_cols=65  Identities=25%  Similarity=0.202  Sum_probs=59.6

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhc-CCCCCc--------eecCccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRT-DPFRHK--------FVCYACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~-h~~~k~--------~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      ....|.|+.|++.|.+ ...|..|      + ++ |.++++        |.|+.|++.|.....|..|+++|++++||.|
T Consensus        22 ~~~~~~C~~C~k~f~~-~~~L~~H------~-~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           22 AQLSRPKKSCDRTFST-MHELVTH------V-TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SCSSSSCCCCCCCCSS-HHHHHHH------H-HHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CcCCCcccccccccCC-HHHHHHH------H-HHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            3446789999999999 9999999      8 76 999888        9999999999999999999999999999999


Q ss_pred             cc
Q psy7453         179 GQ  180 (200)
Q Consensus       179 ~~  180 (200)
                      +.
T Consensus        94 ~~   95 (95)
T 2ej4_A           94 SG   95 (95)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=7.9e-15  Score=98.40  Aligned_cols=62  Identities=24%  Similarity=0.348  Sum_probs=56.9

Q ss_pred             CCCCcccccChhhh-ccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHH-HHHcCCCCCccc
Q psy7453         108 NTFSPFCIYCKAVL-STNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTGEKPYAC  178 (200)
Q Consensus       108 ~~~~~~C~~C~~~f-~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H-~~~H~~~k~~~C  178 (200)
                      ++++|.|++|++.| .+ ...|..|      + ++| +++||.|++||+.|.....|..| +++|+++..|.+
T Consensus        31 ~~~~~~C~~C~k~F~~~-~~~L~~H------~-~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKT-IEGLKKH------M-ENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HTSCEECTTTCSCEESS-HHHHHHH------H-HHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCCCcCCCCCCCCcccC-HHHHHHH------H-HHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            67899999999999 99 9999999      9 999 99999999999999999999999 899987655544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.1e-15  Score=96.58  Aligned_cols=70  Identities=10%  Similarity=0.078  Sum_probs=62.8

Q ss_pred             hhhhhhhhhhcCCCCCCCcccccccccccccccccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhh
Q psy7453          59 LNLNLSVLLVTTIPTQNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSM  138 (200)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~  138 (200)
                      ..|..|+..   |.++++|.|+.|++.|.....|..              +++|.|++|++.|.. ...|..|      +
T Consensus         4 ~~l~~H~~~---h~~~~~~~C~~C~k~f~~~~~l~~--------------~~~~~C~~C~~~f~~-~~~l~~H------~   59 (73)
T 2ctu_A            4 GSSGKRQKI---HLGDRSQKCSKCGIIFIRRSTLSR--------------RKTPMCEKCRKDSCQ-EAALNKD------E   59 (73)
T ss_dssp             CSCCCCCCC---CCCCSEEECSSSCCEEECCCCCCC--------------SSSCCCHHHHHTCSC-CCSSCCC------S
T ss_pred             hhHHHHHHH---hCCCCCeeCCcccchhCCHHHhCc--------------CCCCCCCCCChhhcC-HHHHHHH------H
Confidence            456677766   899999999999999999988853              689999999999999 9999999      9


Q ss_pred             hhcCCCCCceecCcc
Q psy7453         139 IRTDPFRHKFVCYAC  153 (200)
Q Consensus       139 ~~~h~~~k~~~C~~C  153 (200)
                       ++|++++||.|++|
T Consensus        60 -~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           60 -GNESGKKTSGPSSG   73 (73)
T ss_dssp             -SCCCCCCCSSCCCC
T ss_pred             -HhhcCCCCCCCCCC
Confidence             99999999999987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.4e-14  Score=88.20  Aligned_cols=56  Identities=20%  Similarity=0.372  Sum_probs=53.0

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHH-HHcCCC
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHI-RTHTGE  173 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~-~~H~~~  173 (200)
                      +||.|++|++.|.+ ...|..|      + ++|.+++||.|+.|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFAR-QEHLKRH------Y-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSC-HHHHHHH------H-HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCC-HHHHHHH------H-HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            58999999999999 9999999      9 9999999999999999999999999997 688875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=4e-15  Score=100.07  Aligned_cols=68  Identities=19%  Similarity=0.256  Sum_probs=61.7

Q ss_pred             CCCCCCCcccccChhhhc-cCHHHHHhchhhhhhhhhcCCC-CCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         105 NANNTFSPFCIYCKAVLS-TNLNELIEHCRTCKSMIRTDPF-RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~-~~~~~l~~H~~~~~~~~~~h~~-~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      .+.++++|.|++|++.|. . ...|..|      + ++|.+ +++|.|++|++.|.....|..|+++|++++|+.-..
T Consensus        18 ~h~~~~~~~C~~C~k~f~~~-~~~L~~H------~-~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           18 AIHERGEAVCPTCNVVTRKT-LVGLKKH------M-EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             TTTTTSCCCCTTTCCCCSSC-SHHHHHH------H-HHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             HhccCCCcCCCCCCCChhhh-HHHHHHH------H-HHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            345789999999999999 9 9999999      8 89988 999999999999999999999999999999866543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.6e-14  Score=89.67  Aligned_cols=59  Identities=15%  Similarity=0.229  Sum_probs=54.4

Q ss_pred             CCCCCCcccccChhhhccCHHHHHhchhhhhhhhhc-C-CCCCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRT-D-PFRHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       106 ~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~-h-~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      +.+++||.|+.|++.|.+ ...|..|      + +. | .+++||.|+.|++.|...+.|..|+++|.+
T Consensus         5 h~~~k~~~C~~C~k~f~~-~~~l~~H------~-~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTH-ISNFCRH------Y-VTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESS-HHHHHHH------H-HHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCC-HHHHHHH------H-HHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            347899999999999999 9999999      8 76 8 699999999999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.4e-14  Score=90.24  Aligned_cols=56  Identities=23%  Similarity=0.335  Sum_probs=50.8

Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc-cCcccccCHHHHHHHHhhhc
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG-QCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~-~C~k~f~~~~~L~~H~~~h~  199 (200)
                      +.+++||.|+.|++.|. .+.|..|+++ ++++||+|+ .||+.|..+..|..|+++|.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            46788999999999999 9999999998 899999999 99999999999999999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=5.7e-14  Score=90.17  Aligned_cols=58  Identities=19%  Similarity=0.298  Sum_probs=55.0

Q ss_pred             CCCCceecCc--cCcccCChHHHHHHHH-HcCCCCCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         143 PFRHKFVCYA--CDYFSYNIGCMRSHIR-THTGEKPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       143 ~~~k~~~C~~--C~~~f~~~~~l~~H~~-~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +++++|.|..  |++.|.....|..|++ +|.++++|.|++  |++.|.+...|..|+++|+|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~   65 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD   65 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence            5788999997  9999999999999999 799999999999  99999999999999999975

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=3.5e-14  Score=81.75  Aligned_cols=43  Identities=23%  Similarity=0.274  Sum_probs=42.0

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            4 G-SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             c-CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 999999999999999999999999999999999999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.47  E-value=5.6e-14  Score=88.77  Aligned_cols=59  Identities=29%  Similarity=0.547  Sum_probs=53.4

Q ss_pred             hcCCCCCceecCc--cCcccCChHHHHHHHHHcCCCCCccccc--CcccccCHHHHHHHHhhh
Q psy7453         140 RTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEKPYACGQ--CAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       140 ~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h  198 (200)
                      ..+..+++|.|+.  |++.|.....|..|+++|+++++|+|++  |++.|.+...|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4566788999988  9999999999999999999999999965  999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.47  E-value=3.4e-14  Score=81.91  Aligned_cols=43  Identities=23%  Similarity=0.304  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            4 G-SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             C-CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.4e-14  Score=81.88  Aligned_cols=43  Identities=19%  Similarity=0.284  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            4 G-SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             C-CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             c-CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.47  E-value=5.8e-15  Score=95.96  Aligned_cols=78  Identities=14%  Similarity=0.303  Sum_probs=69.2

Q ss_pred             Cccc--ccccccccccccccccccccCcccCCCCCCCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecC
Q psy7453          76 HSLC--KHCHSQLSHLDLLDHCKTCSYMIRPNANNTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY  151 (200)
Q Consensus        76 ~~~C--~~C~~~f~~~~~l~~C~~C~~~f~~~~~~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~  151 (200)
                      ||.|  +.|++.|.....|...       ...+.++++|.|++  |++.|.+ ...|.+|      + ++|.+   |.|+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H-------~~~h~~~~~~~C~~~~C~~~f~~-~~~l~~H------~-~~h~~---~~C~   62 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVH-------QFSHTQQLPYECPHEGCDKRFSL-PSRLKRH------E-KVHAG---YPCK   62 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHH-------HHHHHTTCCEECCSTTCCCEESS-HHHHHHH------H-HHHHS---EECC
T ss_pred             CccCCCCCCCcccCCHHHHHHH-------HHHhCCCCCeeCCCCCCcCccCC-HHHHHHH------H-HHhCC---CCCC
Confidence            6889  9999999999988654       23345789999988  9999999 9999999      8 88987   9999


Q ss_pred             c---cCcccCChHHHHHHHHHcC
Q psy7453         152 A---CDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       152 ~---C~~~f~~~~~l~~H~~~H~  171 (200)
                      .   |++.|...+.|..|+++|+
T Consensus        63 ~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           63 KDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             SCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCCCccCCHHHHHHHHHhcC
Confidence            9   9999999999999999874

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=3.9e-14  Score=81.60  Aligned_cols=43  Identities=26%  Similarity=0.282  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            4 G-SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             C-CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             C-CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.7e-14  Score=81.25  Aligned_cols=43  Identities=16%  Similarity=0.213  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||.|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            4 G-SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             S-CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             c-cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.8e-14  Score=82.29  Aligned_cols=43  Identities=14%  Similarity=0.143  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            4 G-SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             C-CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             C-CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            7 999999999999999999999999999999999999999987

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.46  E-value=1.2e-15  Score=107.41  Aligned_cols=85  Identities=16%  Similarity=0.214  Sum_probs=70.3

Q ss_pred             CCCCCCcccccccccccccc------cccccccccCcccCCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCC
Q psy7453          71 IPTQNHSLCKHCHSQLSHLD------LLDHCKTCSYMIRPNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF  144 (200)
Q Consensus        71 ~~~~~~~~C~~C~~~f~~~~------~l~~C~~C~~~f~~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~  144 (200)
                      ..+++.+.|+.|.+.|....      .|...        ..+.+++||.|++|++.|.. ...|..|      + ++|  
T Consensus        36 ~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h--------~~h~~~~~~~C~~C~k~f~~-~~~l~~H------~-~~H--   97 (129)
T 2wbt_A           36 TPEQKRLIRAIVKTLIHNPQLLDESSYLYRL--------LASKAISQFVCPLCLMPFSS-SVSLKQH------I-RYT--   97 (129)
T ss_dssp             CHHHHHHHHHHHHHHHHCGGGTTTHHHHHHH--------HHHHHHCSEECTTTCCEESS-HHHHHHH------H-HHT--
T ss_pred             ChhhCcccchhhhcccCCCcccCCHHHHHHH--------HHhCCCCCeECCCCCcccCC-HhHHHHH------H-HHC--
Confidence            34566788999988887432      22221        12347899999999999999 9999999      9 899  


Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ++||.|+.||+.|...+.|..|+++|+|+
T Consensus        98 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           98 EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            88999999999999999999999999886

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.9e-14  Score=81.55  Aligned_cols=43  Identities=23%  Similarity=0.353  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            4 G-SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             C-CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             c-ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.2e-14  Score=91.35  Aligned_cols=65  Identities=15%  Similarity=0.138  Sum_probs=58.5

Q ss_pred             CCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCC---CCceecCccCcccCChHHHHHHH-HHcCCCCCcccc
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF---RHKFVCYACDYFSYNIGCMRSHI-RTHTGEKPYACG  179 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~---~k~~~C~~C~~~f~~~~~l~~H~-~~H~~~k~~~C~  179 (200)
                      .++++|.|++|++.|.. ...|..|      + ++|.+   +++|.|++|++.|.....|..|+ +.|.++++....
T Consensus         3 ~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQ-KASLNWH------Q-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CSCCCEECSSSCCEESS-HHHHHHH------H-HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCcCeECCCCCCeeCC-HHHHHHH------H-HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            47899999999999999 9999999      8 88885   89999999999999999999999 568888876544

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.6e-14  Score=80.49  Aligned_cols=43  Identities=21%  Similarity=0.257  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         2 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 S-SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             C-CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             C-CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6 899999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.9e-14  Score=81.19  Aligned_cols=43  Identities=19%  Similarity=0.251  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            4 G-SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             C-CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             c-cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.6e-14  Score=81.28  Aligned_cols=43  Identities=21%  Similarity=0.272  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            4 G-SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             S-SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             C-CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.7e-14  Score=81.71  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            4 G-SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             c-cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.7e-14  Score=81.21  Aligned_cols=43  Identities=19%  Similarity=0.210  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            4 G-SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             C-CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             C-CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.46  E-value=3.8e-14  Score=81.65  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            4 G-SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             c-cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.6e-14  Score=81.30  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            4 G-SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             c-ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.46  E-value=3.4e-14  Score=81.80  Aligned_cols=43  Identities=21%  Similarity=0.195  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            4 G-SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             C-CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             c-cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=3.8e-14  Score=81.66  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            4 G-SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             C-CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4e-14  Score=81.53  Aligned_cols=43  Identities=21%  Similarity=0.296  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            4 G-SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             S-SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             C-CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4.9e-14  Score=81.16  Aligned_cols=43  Identities=21%  Similarity=0.226  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            4 G-SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             C-CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             C-CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=4e-14  Score=81.55  Aligned_cols=43  Identities=23%  Similarity=0.344  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            4 G-SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             c-cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.9e-14  Score=81.63  Aligned_cols=43  Identities=23%  Similarity=0.255  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            4 G-SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             c-CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 999999999999999999999999999999999999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.46  E-value=6e-14  Score=83.81  Aligned_cols=48  Identities=21%  Similarity=0.421  Sum_probs=44.1

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHH-HcCCCCCcccccCcccccC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQCAFRSAS  187 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~k~~~C~~C~k~f~~  187 (200)
                      ..|.+++||.|++|++.|.....|..|++ +|++++||+|++|++.|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            56788999999999999999999999987 8999999999999999986

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.45  E-value=3.5e-14  Score=81.79  Aligned_cols=43  Identities=23%  Similarity=0.349  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            4 G-SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             C-CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             c-CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.5e-14  Score=80.91  Aligned_cols=43  Identities=16%  Similarity=0.094  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            4 G-SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             C-CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             c-ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.9e-14  Score=81.61  Aligned_cols=43  Identities=21%  Similarity=0.300  Sum_probs=41.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            4 G-SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             C-cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.45  E-value=5e-14  Score=81.18  Aligned_cols=43  Identities=23%  Similarity=0.298  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            4 G-SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             C-CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 999999999999999999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=4.6e-14  Score=81.25  Aligned_cols=43  Identities=23%  Similarity=0.263  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            4 G-SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             C-CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             c-ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.4e-14  Score=80.98  Aligned_cols=43  Identities=26%  Similarity=0.346  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 G-SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             S-CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             C-CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=5.7e-14  Score=80.86  Aligned_cols=43  Identities=26%  Similarity=0.265  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            4 G-SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             C-CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.7e-14  Score=81.24  Aligned_cols=43  Identities=21%  Similarity=0.268  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            4 G-SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             C-cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=4.6e-14  Score=81.25  Aligned_cols=43  Identities=21%  Similarity=0.186  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            4 G-SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             C-CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             c-cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.45  E-value=6.4e-14  Score=80.73  Aligned_cols=43  Identities=21%  Similarity=0.192  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         4 ~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 G-SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             C-CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             C-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=8e-14  Score=80.25  Aligned_cols=43  Identities=28%  Similarity=0.350  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 G-SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             S-SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             C-CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.44  E-value=5.3e-14  Score=80.99  Aligned_cols=43  Identities=23%  Similarity=0.367  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            4 G-SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             C-CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             C-CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=4.8e-14  Score=81.27  Aligned_cols=43  Identities=23%  Similarity=0.306  Sum_probs=41.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            4 G-SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             c-cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=4.3e-14  Score=81.44  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=41.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            4 G-SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             C-CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             C-cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=7.9e-14  Score=80.28  Aligned_cols=43  Identities=14%  Similarity=0.194  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 G-SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             S-CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             c-cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.8e-14  Score=80.85  Aligned_cols=43  Identities=26%  Similarity=0.299  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            4 G-SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             C-CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=5.5e-14  Score=80.99  Aligned_cols=43  Identities=19%  Similarity=0.206  Sum_probs=41.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 G-SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             C-SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             C-CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=4.6e-14  Score=81.25  Aligned_cols=43  Identities=23%  Similarity=0.317  Sum_probs=41.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            4 G-SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             S-CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             C-cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=5.7e-14  Score=80.88  Aligned_cols=43  Identities=21%  Similarity=0.203  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            4 G-SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             C-CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=6.1e-14  Score=80.76  Aligned_cols=43  Identities=28%  Similarity=0.335  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            4 G-SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             T-TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             c-cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=6.7e-14  Score=80.63  Aligned_cols=43  Identities=23%  Similarity=0.334  Sum_probs=41.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            4 G-SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             S-SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             C-cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=6.1e-14  Score=80.75  Aligned_cols=43  Identities=19%  Similarity=0.225  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            4 G-SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             C-CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             C-cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.7e-14  Score=80.34  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=41.4

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            4 G-SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             C-CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=9.2e-14  Score=80.04  Aligned_cols=43  Identities=21%  Similarity=0.158  Sum_probs=41.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         4 ~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 G-SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             C-CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             C-CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.1e-14  Score=80.56  Aligned_cols=43  Identities=19%  Similarity=0.281  Sum_probs=41.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 G-SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             C-CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             C-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=4e-14  Score=81.56  Aligned_cols=43  Identities=26%  Similarity=0.298  Sum_probs=41.5

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            4 G-SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             C-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999988

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.6e-13  Score=86.80  Aligned_cols=65  Identities=18%  Similarity=0.327  Sum_probs=56.0

Q ss_pred             CCCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCC-CceecCccCcccCChHHHHHHHHHc-CCCCC
Q psy7453         104 PNANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFR-HKFVCYACDYFSYNIGCMRSHIRTH-TGEKP  175 (200)
Q Consensus       104 ~~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~-k~~~C~~C~~~f~~~~~l~~H~~~H-~~~k~  175 (200)
                      ..+.+++||.|++|++.|.+ ...|..|      ++..|.++ ++|.|++|++.|.....|..|+++| .++.|
T Consensus         8 ~~H~~~k~~~C~~C~k~f~~-~~~L~~H------~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            8 RTHSGEKPYECYICHARFTQ-SGTMKMH------ILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCSCCCSEECTTTCCEESC-HHHHHHH------HHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             cccCCCCCeECCCcCchhCC-HHHHHHH------HHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            34568899999999999999 9999999      83378875 8999999999999999999999984 44554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.1e-13  Score=78.51  Aligned_cols=43  Identities=28%  Similarity=0.341  Sum_probs=41.4

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            4 G-SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             C-CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999999999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.4e-13  Score=79.44  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=41.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHH-HcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++||+.|...+.|..|++ +|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            4 G-SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             C-CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             c-cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            7 89999999999999999999999999999 9999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.39  E-value=2.5e-14  Score=88.04  Aligned_cols=51  Identities=14%  Similarity=0.212  Sum_probs=46.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHH
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLH  192 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~  192 (200)
                      + ++|++++||.|+.||+.|.....|.   ++|++++||.|+.||+.|....++.
T Consensus         6 ~-~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            6 E-RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             S-SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             H-HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            8 9999999999999999999988886   8899999999999999998876653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.38  E-value=2.9e-13  Score=77.52  Aligned_cols=43  Identities=16%  Similarity=0.236  Sum_probs=40.8

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA  182 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~  182 (200)
                      ..|++++||.|++|++.|...+.|..|+++|+++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5789999999999999999999999999999999999999997

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.38  E-value=3.6e-13  Score=77.48  Aligned_cols=42  Identities=26%  Similarity=0.323  Sum_probs=40.5

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            4 G-SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             C-CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             C-CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.5e-13  Score=86.92  Aligned_cols=59  Identities=27%  Similarity=0.378  Sum_probs=54.6

Q ss_pred             CCCCCCCcccc--cChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcC
Q psy7453         105 NANNTFSPFCI--YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       105 ~~~~~~~~~C~--~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      ...++++|.|+  .|++.|.. ...|..|      + ++|.+++||.|++||+.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~-~~~l~~H------~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSR-SDELTRH------I-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESS-HHHHHHH------H-HHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCC-HHHHHHH------H-HhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34578999997  59999999 9999999      9 99999999999999999999999999999885

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.3e-13  Score=77.18  Aligned_cols=42  Identities=24%  Similarity=0.361  Sum_probs=40.4

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            4 G-SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             C-CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             c-cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            7 99999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.8e-13  Score=76.93  Aligned_cols=42  Identities=24%  Similarity=0.350  Sum_probs=40.4

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            4 G-SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             C-CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             C-CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.9e-13  Score=76.81  Aligned_cols=42  Identities=21%  Similarity=0.304  Sum_probs=40.4

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            4 G-SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             C-CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             c-CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4e-13  Score=77.25  Aligned_cols=43  Identities=23%  Similarity=0.279  Sum_probs=41.0

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         4 ~-~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 G-SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             C-CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             C-CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5 889999999999999999999999999999999999999987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.3e-13  Score=77.15  Aligned_cols=42  Identities=24%  Similarity=0.321  Sum_probs=40.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||.|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            4 G-SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             C-CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             c-cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=3.9e-13  Score=78.14  Aligned_cols=44  Identities=25%  Similarity=0.495  Sum_probs=37.1

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF  183 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k  183 (200)
                      ..|.++++|.|++|++.|.....|..|+++|++++||.|++|+|
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            45677888888888888888888888888888888888888875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.36  E-value=5.4e-13  Score=75.13  Aligned_cols=41  Identities=24%  Similarity=0.323  Sum_probs=39.2

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+
T Consensus         2 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 S-SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             C-SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             C-CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            6 8999999999999999999999999999999999999985

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.5e-13  Score=76.61  Aligned_cols=42  Identities=29%  Similarity=0.358  Sum_probs=40.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            4 G-SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             C-CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             C-CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.5e-13  Score=77.03  Aligned_cols=42  Identities=21%  Similarity=0.294  Sum_probs=40.2

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||.|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            4 G-SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             C-CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             C-cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.7e-13  Score=76.34  Aligned_cols=42  Identities=17%  Similarity=0.241  Sum_probs=40.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            4 G-SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             C-CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             c-cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999973

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=7.5e-13  Score=74.47  Aligned_cols=41  Identities=15%  Similarity=0.194  Sum_probs=39.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|.
T Consensus         2 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 S-SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             C-SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             C-cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6 8899999999999999999999999999999999999984

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.5e-13  Score=76.60  Aligned_cols=42  Identities=24%  Similarity=0.337  Sum_probs=40.4

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            4 G-SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             S-SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             C-cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.1e-13  Score=76.50  Aligned_cols=42  Identities=17%  Similarity=0.216  Sum_probs=40.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            4 G-SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             C-CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             c-ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.6e-13  Score=76.37  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=40.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||.|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            4 G-SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             C-SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             C-CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=7.2e-13  Score=75.31  Aligned_cols=41  Identities=24%  Similarity=0.331  Sum_probs=39.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|+
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            4 G-SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             S-SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             c-cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            7 8999999999999999999999999999999999999985

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.1e-13  Score=76.74  Aligned_cols=42  Identities=24%  Similarity=0.387  Sum_probs=40.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            4 G-SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             S-CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             C-CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            7 89999999999999999999999999999999999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.8e-13  Score=77.97  Aligned_cols=42  Identities=21%  Similarity=0.214  Sum_probs=40.6

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      ++|++++||.|++|++.|...+.|..|+++|++++||+|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999999999999999999999999999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.5e-13  Score=76.60  Aligned_cols=42  Identities=21%  Similarity=0.314  Sum_probs=40.2

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            4 G-SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             C-CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             c-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.5e-13  Score=77.02  Aligned_cols=42  Identities=24%  Similarity=0.335  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            4 G-SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             C-CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             c-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.4e-13  Score=76.72  Aligned_cols=42  Identities=29%  Similarity=0.369  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            4 G-SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             C-SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             c-cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=6.3e-13  Score=76.36  Aligned_cols=42  Identities=24%  Similarity=0.318  Sum_probs=40.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|.....|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            4 G-SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             C-CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             c-cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5.9e-13  Score=76.53  Aligned_cols=42  Identities=21%  Similarity=0.354  Sum_probs=40.2

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            4 G-SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             C-CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             C-CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1.6e-12  Score=86.28  Aligned_cols=55  Identities=15%  Similarity=0.118  Sum_probs=51.7

Q ss_pred             CceecCccCcccCChHHHHHHHHH-cCCCCC--------cccccCcccccCHHHHHHHHhhhcC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRT-HTGEKP--------YACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~-H~~~k~--------~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..+.|+.|++.|.....|..|+++ |.++++        |.|++|++.|.+...|..|+++|+|
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~   87 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG   87 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence            347899999999999999999998 999888        9999999999999999999999986

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=5e-13  Score=76.84  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||.|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            4 G-SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             C-CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             C-cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=7.3e-13  Score=76.12  Aligned_cols=42  Identities=21%  Similarity=0.332  Sum_probs=40.2

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            4 G-SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             C-CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             C-cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=6.5e-13  Score=76.38  Aligned_cols=42  Identities=24%  Similarity=0.317  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            4 G-SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             C-SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             c-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=9e-13  Score=75.00  Aligned_cols=41  Identities=22%  Similarity=0.310  Sum_probs=39.5

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            4 G-SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             S-CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             c-cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            7 8999999999999999999999999999999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=9.1e-13  Score=75.76  Aligned_cols=42  Identities=24%  Similarity=0.411  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            4 G-SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             C-CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             C-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999973

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=6.3e-13  Score=76.40  Aligned_cols=42  Identities=21%  Similarity=0.292  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|+.|++.|.....|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            4 G-SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             C-CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             c-cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.3e-15  Score=94.42  Aligned_cols=62  Identities=18%  Similarity=0.214  Sum_probs=40.9

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      .+.++++|.|++|++.|.. ...|.          .    +++|.|+.||+.|...+.|..|+++|+++++|.|++|
T Consensus        12 ~h~~~~~~~C~~C~k~f~~-~~~l~----------~----~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           12 IHLGDRSQKCSKCGIIFIR-RSTLS----------R----RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCSEEECSSSCCEEEC-CCCCC----------C----SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HhCCCCCeeCCcccchhCC-HHHhC----------c----CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3446667777777777766 44322          1    5667777777777777777777777777777777666

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.7e-13  Score=75.44  Aligned_cols=41  Identities=27%  Similarity=0.360  Sum_probs=39.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|+
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            4 G-SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             C-CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             C-cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            7 8999999999999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6.9e-13  Score=75.45  Aligned_cols=41  Identities=20%  Similarity=0.327  Sum_probs=39.4

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|+++++|+|+
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            4 G-SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             C-CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             c-cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            7 8999999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7.5e-13  Score=76.16  Aligned_cols=42  Identities=17%  Similarity=0.263  Sum_probs=39.9

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            4 G-SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             S-SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             C-CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=5.9e-13  Score=82.70  Aligned_cols=58  Identities=14%  Similarity=0.264  Sum_probs=53.2

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecC-ccCcccCChHHHHHHHHHcCCCCC
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY-ACDYFSYNIGCMRSHIRTHTGEKP  175 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~-~C~~~f~~~~~l~~H~~~H~~~k~  175 (200)
                      +++||.|++|++.|.  .+.|..|      + ++ ++++||.|+ .||+.|...+.|..|+++|.+.++
T Consensus         7 ~~~~~~C~~C~k~f~--~~~L~~H------~-~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV--FDTIQSH------Q-YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE--HHHHHHH------H-HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC--HHHHHHH------H-HH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            678999999999998  5889999      8 78 999999999 999999999999999999987665

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=9.5e-13  Score=74.90  Aligned_cols=41  Identities=17%  Similarity=0.265  Sum_probs=39.5

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|+
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            4 G-SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             C-SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             c-cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            7 9999999999999999999999999999999999999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.31  E-value=1.7e-12  Score=72.96  Aligned_cols=40  Identities=15%  Similarity=0.236  Sum_probs=38.6

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|
T Consensus         3 ~-~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 S-GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             C-SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             C-ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            6 899999999999999999999999999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=75.32  Aligned_cols=42  Identities=19%  Similarity=0.278  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            4 G-SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             C-CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             c-cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.4e-13  Score=75.69  Aligned_cols=42  Identities=19%  Similarity=0.224  Sum_probs=40.2

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|.....|..|+++|+++++|.|+.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            4 G-SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             C-SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             C-cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            7 89999999999999999999999999999999999999973

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.2e-12  Score=75.26  Aligned_cols=42  Identities=19%  Similarity=0.183  Sum_probs=40.1

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCC-CCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG-EKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~-~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++ ++||+|++
T Consensus         4 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            4 G-SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             C-CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             c-cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7 899999999999999999999999999999999 99999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.1e-12  Score=73.76  Aligned_cols=40  Identities=20%  Similarity=0.378  Sum_probs=38.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      + ++|++++||.|+.|++.|...+.|..|+++|++++||+|
T Consensus         3 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 S-GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             C-CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             C-cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            7 899999999999999999999999999999999999988

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.7e-13  Score=74.66  Aligned_cols=40  Identities=25%  Similarity=0.382  Sum_probs=37.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      + ++|++++||.|++||+.|...+.|..|+++|++++||+|
T Consensus         3 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            3 S-GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             C-CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             c-cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            7 899999999999999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.30  E-value=4.3e-13  Score=79.99  Aligned_cols=52  Identities=12%  Similarity=0.040  Sum_probs=45.5

Q ss_pred             hhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcc
Q psy7453         118 KAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA  177 (200)
Q Consensus       118 ~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~  177 (200)
                      ++.|.. ...|..|      + ++|++++||.|++||+.|...+.|..|+++|+|++||.
T Consensus         3 ~k~~~~-~~~l~~h------~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKH-PPGTEKP------R-SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSC-SSCCCCC------H-HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCC-CcchhhH------H-HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            356777 7888889      8 89999999999999999999999999999999999874

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.2e-12  Score=75.25  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=39.7

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         4 ~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            4 G-SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             C-CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             C-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6 89999999999999999999999999999999999999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.1e-12  Score=75.41  Aligned_cols=41  Identities=17%  Similarity=0.229  Sum_probs=39.8

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            4 G-SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             C-CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             c-cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            7 8999999999999999999999999999999999999996

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2e-12  Score=73.53  Aligned_cols=41  Identities=17%  Similarity=0.250  Sum_probs=39.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|.....|..|+++|++++||+|+
T Consensus         4 ~-~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            4 G-SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             S-CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             C-CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            7 8999999999999999999999999999999999999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=2.6e-12  Score=72.78  Aligned_cols=41  Identities=15%  Similarity=0.222  Sum_probs=38.5

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      ++|++++||.|+.|++.|...+.|..|+++|++++||+|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            67899999999999999999999999999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.4e-12  Score=73.43  Aligned_cols=40  Identities=23%  Similarity=0.405  Sum_probs=38.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||+|
T Consensus         3 ~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 S-GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             C-SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             C-cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            6 899999999999999999999999999999999999988

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=74.31  Aligned_cols=41  Identities=17%  Similarity=0.228  Sum_probs=39.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         4 ~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            4 G-SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             C-CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             C-cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            7 8999999999999999999999999999999999999984

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.3e-12  Score=74.54  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=40.8

Q ss_pred             hhhcCCCCCceecC--ccCcccCChHHHHHHHHHcCCCCCcccccC
Q psy7453         138 MIRTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYACGQC  181 (200)
Q Consensus       138 ~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C  181 (200)
                      . ++|++++||.|.  .|++.|.....|..|+++|++++||+|+.|
T Consensus         4 ~-~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 G-SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             C-CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             C-CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5 889999999998  899999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.1e-12  Score=73.52  Aligned_cols=41  Identities=27%  Similarity=0.384  Sum_probs=39.1

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      ++|++++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            88999999999999999999999999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.1e-12  Score=73.88  Aligned_cols=41  Identities=27%  Similarity=0.365  Sum_probs=38.8

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      ++|++++||.|++|++.|.....|..|+++|++++||+|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            78999999999999999999999999999999999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.1e-12  Score=72.29  Aligned_cols=41  Identities=20%  Similarity=0.230  Sum_probs=39.0

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      + ++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         4 ~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            4 G-SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             C-CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             C-cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            7 8999999999999999999999999999999999999873

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.25  E-value=2.3e-12  Score=81.23  Aligned_cols=56  Identities=25%  Similarity=0.327  Sum_probs=52.1

Q ss_pred             CCCCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc--cCcccCChHHHHHHHHHc
Q psy7453         107 NNTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA--CDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       107 ~~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H  170 (200)
                      ...++|.|+.  |++.|.. ...|..|      + ++|++++||.|++  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFK-SSHLKAH------T-RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESS-HHHHHHH------H-HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCC-HHHHHHH------H-HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3678999998  9999999 9999999      9 9999999999975  999999999999999876

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=4.5e-12  Score=70.89  Aligned_cols=39  Identities=23%  Similarity=0.361  Sum_probs=36.6

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCccc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYAC  178 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C  178 (200)
                      ++|++++||.|++|++.|.....|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            678999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=5.3e-12  Score=75.18  Aligned_cols=47  Identities=13%  Similarity=0.136  Sum_probs=43.3

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhh-cCCCCCceecCccCcccCC
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIR-TDPFRHKFVCYACDYFSYN  159 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~-~h~~~k~~~C~~C~~~f~~  159 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + + +|.+++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSR-PDHLNGH------I-KQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESS-HHHHHHH------H-HHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCC-HHHHHHH------H-HHhcCCCCCccCCCCCCCCCC
Confidence            3457899999999999999 9999999      8 6 9999999999999999975

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=6.6e-13  Score=84.87  Aligned_cols=65  Identities=22%  Similarity=0.247  Sum_probs=58.2

Q ss_pred             HHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         126 NELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       126 ~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..|..|      + ++|.+++|+.|+.|++.|. ...|..|+ .|.+++||.|+.|++.|.. ..|..|+++|++
T Consensus         3 ~~L~~H------~-~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGH------E-ETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCC------C-CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             hHHHhh------C-cccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccC
Confidence            456778      7 8899999999999999994 99999999 8999999999999999884 899999998864

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.21  E-value=1.5e-12  Score=77.64  Aligned_cols=47  Identities=15%  Similarity=0.106  Sum_probs=44.1

Q ss_pred             CcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         154 DYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       154 ~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++.|.....|..|+++|+++++|.|++||+.|.+...|..|+++|+|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            46788888999999999999999999999999999999999999986

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.14  E-value=2.6e-11  Score=70.24  Aligned_cols=43  Identities=9%  Similarity=0.135  Sum_probs=39.8

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDY  155 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~  155 (200)
                      ...++++|.|++|++.|.. ...|.+|      + ++|++++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRD-VYHLNRH------K-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESS-HHHHHHH------G-GGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCC-HHHHHHH------H-HhcCCCCCccCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999999986

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=2.6e-12  Score=84.61  Aligned_cols=57  Identities=16%  Similarity=0.097  Sum_probs=44.8

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++|++++||.|++|++.|.....|..|+++|++++||+|..|.+    ...|..|.+.|.|
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            67888999999999999999999999999999999999877653    3444455655543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.10  E-value=7.4e-11  Score=65.07  Aligned_cols=38  Identities=11%  Similarity=0.152  Sum_probs=33.4

Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      |++++||.|++||+.|...+.|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            57889999999999999999999999999999998763

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.09  E-value=2.3e-11  Score=66.22  Aligned_cols=33  Identities=30%  Similarity=0.519  Sum_probs=16.1

Q ss_pred             HHHcCCCCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         167 IRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       167 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      +++|++++||+|+.|++.|.+...|..|+++|+
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            344444445555555555555555555554444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=5.5e-11  Score=67.78  Aligned_cols=42  Identities=10%  Similarity=0.054  Sum_probs=39.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccC
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACD  154 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~  154 (200)
                      .+.+++||.|++|++.|.. ++.|.+|      + ++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~-~~~l~~H------~-~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKR-KDRMSYH------V-RSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSC-HHHHHHH------H-HHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCC-HHHHHHH------H-HHccCCCCCCCcCCC
Confidence            4457899999999999999 9999999      9 999999999999997

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=9.4e-11  Score=67.06  Aligned_cols=41  Identities=12%  Similarity=0.037  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQ-NSHLARH------R-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSS-HHHHHHH------G-GGTSCCCCCSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCC-HHHHHHH------h-hhcCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1e-10  Score=66.92  Aligned_cols=41  Identities=22%  Similarity=0.131  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSS-KSYLIIH------M-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSC-HHHHHHH------H-TTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCC-hHHHHHH------H-HHhCCCCCCCCCCC
Confidence            4568899999999999999 9999999      9 99999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.8e-11  Score=67.03  Aligned_cols=41  Identities=12%  Similarity=-0.082  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.+ .+.|..|      + ++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSVEKPYKCEDCGKGYNR-RLNLDMH------Q-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCCSSCBCSSSCCBCSS-HHHHHHH------G-GGGGSCCCCCSCCC
T ss_pred             CCCCCCCeeCcccCchhCC-HHHHHHH------H-HhcCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.05  E-value=9.5e-11  Score=66.98  Aligned_cols=41  Identities=17%  Similarity=0.098  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSL-KSQLIVH------Q-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSSCEESS-HHHHHHH------G-GGSSSCCCSCCTTC
T ss_pred             CCCCCCceECCCCCchhCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1e-10  Score=66.81  Aligned_cols=41  Identities=15%  Similarity=0.040  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.+ ...|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSR-APCLLKH------E-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSC-HHHHHHH------H-HHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCc-hHHHHHH------H-HhcCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.05  E-value=1.1e-10  Score=66.76  Aligned_cols=41  Identities=12%  Similarity=-0.021  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQ-ASSLRLH------Q-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSS-HHHHHHH------G-GGGSSSSCSCSSCC
T ss_pred             ccCCCcCeECCCCCcccCC-HHHHHHH------H-HHcCCCCCcCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1e-10  Score=66.99  Aligned_cols=41  Identities=10%  Similarity=0.013  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. +..|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTR-KSTLSMH------Q-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESC-HHHHHHH------G-GGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3458899999999999999 9999999      9 99999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=9.2e-11  Score=67.08  Aligned_cols=41  Identities=10%  Similarity=-0.029  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFIC-RRDLYTH------H-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESC-HHHHHHH------G-GGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1e-10  Score=66.88  Aligned_cols=41  Identities=15%  Similarity=0.072  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQ-NSHLANH------Q-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSS-HHHHHHH------H-GGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.1e-10  Score=66.75  Aligned_cols=41  Identities=17%  Similarity=0.063  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSD-HIGLNQH------R-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSS-HHHHHHH------H-TTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=66.69  Aligned_cols=41  Identities=10%  Similarity=-0.002  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            6 SGTGEKPFKCDICGKSFCG-RSRLNRH------S-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSCCCSSSCCCCSS-HHHHHHH------H-HHTTCCCSSSCCCC
T ss_pred             CCCCCCCcCCCcCCchhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.4e-10  Score=63.06  Aligned_cols=36  Identities=19%  Similarity=0.323  Sum_probs=29.1

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  175 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~  175 (200)
                      ++|++++||.|+.|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            567788888888888888888888888888887764

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=66.93  Aligned_cols=41  Identities=15%  Similarity=0.038  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRH-NSYLSRH------Q-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESS-HHHHHHH------H-TTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCC-hHHHHHH------H-hhcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=9.8e-11  Score=66.97  Aligned_cols=41  Identities=12%  Similarity=0.021  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|..|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRR-NSHLARH------Q-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESS-HHHHHHH------H-TTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1e-10  Score=66.85  Aligned_cols=41  Identities=15%  Similarity=0.078  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSH-RQSLSVH------Q-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESS-HHHHHHH------H-GGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCC-HHHHHHH------H-HHhcCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=66.43  Aligned_cols=41  Identities=15%  Similarity=0.087  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQ-TSKLARH------Q-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSS-HHHHHHH------H-TTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCC-HHHHHHH------H-HhcCCCCCCCCCCC
Confidence            4568899999999999999 9999999      9 99999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=66.83  Aligned_cols=41  Identities=15%  Similarity=0.082  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. ...|..|      + ++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSG-KLRLLVH------Q-RMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESS-HHHHHHH------H-GGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.1e-10  Score=66.80  Aligned_cols=41  Identities=12%  Similarity=0.010  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQ-RVHLTQH------Q-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESS-SHHHHTT------G-GGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.3e-10  Score=66.41  Aligned_cols=41  Identities=17%  Similarity=0.090  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSF-NSQLIVH------Q-RIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSS-HHHHHHH------H-TTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.04  E-value=1e-10  Score=66.93  Aligned_cols=41  Identities=17%  Similarity=0.132  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQ-TTHLIQH------Q-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSC-HHHHHHH------H-HHHSSCCCSSCCCC
T ss_pred             ccCCCCceECCCCCchhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=66.77  Aligned_cols=41  Identities=12%  Similarity=0.009  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYT-NSQCYSH------Q-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESS-HHHHHHH------H-HHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCC-hHHHHHH------H-HHhCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=66.65  Aligned_cols=41  Identities=10%  Similarity=0.034  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTK-KSQLHVH------Q-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESS-HHHHHHH------H-HTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            4567899999999999999 9999999      9 99999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=8.4e-11  Score=66.61  Aligned_cols=41  Identities=15%  Similarity=0.110  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSS-KSYLLVH------Q-QTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESS-HHHHHHH------H-HHHTSSCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.1e-10  Score=66.73  Aligned_cols=41  Identities=10%  Similarity=-0.046  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNS-KFNLDMH------Q-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESC-HHHHHHH------H-TTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCC-HHHHHHH------H-HhhCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.03  E-value=4.8e-11  Score=66.89  Aligned_cols=35  Identities=23%  Similarity=0.399  Sum_probs=32.9

Q ss_pred             HHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       166 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+++|+++++|+|++||+.|.+...|..|+++|+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAG   35 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCC
Confidence            56789999999999999999999999999999986

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.3e-10  Score=66.45  Aligned_cols=41  Identities=17%  Similarity=0.092  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            6 SGSSTKSHQCHECGRGFTL-KSHLNQH------Q-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSEECSSSCCEESS-HHHHHHH------H-TTTSCSCCSSCCCC
T ss_pred             CCCCCCCeECCcCCCccCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.5e-11  Score=66.57  Aligned_cols=35  Identities=29%  Similarity=0.430  Sum_probs=32.8

Q ss_pred             HHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       166 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV   35 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999976

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.3e-10  Score=66.45  Aligned_cols=41  Identities=15%  Similarity=0.023  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCY-ISALRIH------Q-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESS-HHHHHHH------H-TTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.02  E-value=1.1e-10  Score=66.73  Aligned_cols=41  Identities=15%  Similarity=0.083  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSR-NSQLSQH------Q-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESS-HHHHHHH------H-TGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCC-HHHHHHH------H-HhcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=66.35  Aligned_cols=41  Identities=10%  Similarity=-0.006  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A            6 SGTGEKPYKCSDCGKSFTW-KSRLRIH------Q-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSSCCSCBCSSSCCBCSS-HHHHHHH------H-HHHSCCSSCCSCCC
T ss_pred             CCCCCCCccCCccChhhCC-HHHHHHH------H-HhcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1e-10  Score=66.93  Aligned_cols=41  Identities=20%  Similarity=0.130  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|..|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSR-KYQLISH------Q-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESS-HHHHHHH------H-HHHTTSCCSCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCc-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.02  E-value=1.4e-10  Score=66.25  Aligned_cols=41  Identities=12%  Similarity=0.047  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.+ .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRW-ASCLLKH------Q-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESS-HHHHHHH------G-GGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCC-hHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.7e-10  Score=65.90  Aligned_cols=41  Identities=17%  Similarity=0.204  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. ...|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGL-SAELVRH------Q-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESS-HHHHHHH------H-GGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCC-HHHHHHH------H-HhcCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.02  E-value=1e-10  Score=66.97  Aligned_cols=41  Identities=12%  Similarity=0.023  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.+ .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSR-RSALNVH------H-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSS-TTHHHHH------H-HHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.4e-10  Score=66.27  Aligned_cols=41  Identities=12%  Similarity=0.045  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQ-NSQLHSH------Q-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESS-HHHHHHH------G-GGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4557899999999999999 9999999      9 99999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1e-10  Score=66.83  Aligned_cols=41  Identities=15%  Similarity=0.089  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQ-SAHLIQH------Q-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESS-HHHHHHH------H-HHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.8e-10  Score=66.10  Aligned_cols=41  Identities=17%  Similarity=0.109  Sum_probs=38.0

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhh-cCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIR-TDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~-~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + + +|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQ-NTSLIRH------W-RYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSS-HHHHHHH------H-TTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCC-hHHHHHH------h-HhhcCCCCCCCCCCC
Confidence            4558899999999999999 9999999      9 8 9999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=66.66  Aligned_cols=41  Identities=15%  Similarity=0.049  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.+ .+.|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            6 SGSGEKPYKCSECGKAFHR-HTHLNEH------R-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSCCEESS-HHHHHHH------H-HHHTCCCSSCSSCC
T ss_pred             ccCCCcCeECCCCCCeeCC-hHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.5e-10  Score=66.23  Aligned_cols=41  Identities=12%  Similarity=0.171  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTI-RSNLIKH------Q-KIHTKQKPSGPSSG   46 (46)
T ss_dssp             TTSSCCSEECSSSCCEESS-HHHHHHH------H-HHTSCCCCSSCSCC
T ss_pred             CCCCCcCeECCCCChhhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.1e-10  Score=66.90  Aligned_cols=41  Identities=10%  Similarity=0.064  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.+ .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKAFGD-NSSCTQH------Q-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSCCSSSBTTTTBCCSS-HHHHHHH------H-HHHHSCCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCchhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2.9e-10  Score=70.40  Aligned_cols=39  Identities=13%  Similarity=0.092  Sum_probs=27.3

Q ss_pred             CCCCCceecCc--cCcccCChHHHHHHH-HHcCCCCCccccc
Q psy7453         142 DPFRHKFVCYA--CDYFSYNIGCMRSHI-RTHTGEKPYACGQ  180 (200)
Q Consensus       142 h~~~k~~~C~~--C~~~f~~~~~l~~H~-~~H~~~k~~~C~~  180 (200)
                      .+++|||+|..  |+++|...++|..|+ ++|+++|||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            45677777754  777777777777776 5677777777743

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.2e-10  Score=66.65  Aligned_cols=41  Identities=15%  Similarity=0.096  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            6 SGSGEKPYKCNECGKVFTQ-NSHLTNH------W-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSEECSSSCCEESS-HHHHHHH------H-HHHSSSSCSSCCCC
T ss_pred             cCCCCCCEeCCcCCCccCC-HHHHHHH------H-HHHCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.3e-10  Score=66.40  Aligned_cols=41  Identities=17%  Similarity=0.096  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCW-KSQLIMH------Q-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESS-SHHHHHH------H-HHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.3e-10  Score=66.38  Aligned_cols=41  Identities=17%  Similarity=0.098  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||+|+.|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQ-YVSLIEH------Q-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESS-HHHHHHH------H-HHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.7e-10  Score=65.92  Aligned_cols=41  Identities=12%  Similarity=0.011  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRY-GSSLTVH------Q-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESS-HHHHHHH------H-TTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCC-hHHHHHH------H-HHhCCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 99999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=66.53  Aligned_cols=41  Identities=17%  Similarity=0.049  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQ-KSILSAH------Q-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESS-HHHHHHH------H-HHHSSCCCSSSCCC
T ss_pred             ccCCCcCeECCCCCcccCc-hHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4568899999999999999 9999999      9 99999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=66.80  Aligned_cols=41  Identities=12%  Similarity=0.073  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSV-YSSLTTH------Q-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESC-HHHHHHH------H-HHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.99  E-value=4.6e-10  Score=60.01  Aligned_cols=35  Identities=26%  Similarity=0.271  Sum_probs=25.7

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCCCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  175 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~  175 (200)
                      +|++++||.|+.|++.|...+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36677777777777777777777777777777654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.3e-10  Score=66.54  Aligned_cols=41  Identities=15%  Similarity=0.102  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.+ .+.|..|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGR-HSHLIEH------L-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESS-HHHHHHH------H-HHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCC-HHHHHHH------H-HHHcCCCCCCCCCC
Confidence            4568899999999999999 9999999      9 99999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.1e-10  Score=66.84  Aligned_cols=41  Identities=12%  Similarity=0.167  Sum_probs=38.0

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTD-RSNLIKH------Q-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESS-HHHHHHH------H-HHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCC-HHHHHHH------H-HhcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.2e-10  Score=65.45  Aligned_cols=41  Identities=10%  Similarity=0.083  Sum_probs=37.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. ++.|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTD-RSNLFTH------Q-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESS-HHHHHHH------H-TTTTTSCCCCTTCC
T ss_pred             CCCCCCCeECCCCCchhCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999875

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8.6e-11  Score=66.64  Aligned_cols=36  Identities=28%  Similarity=0.374  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG   37 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC
Confidence            377889999999999999999999999999999976

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.2e-10  Score=66.60  Aligned_cols=41  Identities=12%  Similarity=-0.018  Sum_probs=38.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSGEKPYKCVECGKGYKR-RLDLDFH------Q-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCSCCSEECSSSCCEESS-HHHHHHH------H-HHHHCCCCCCSCCC
T ss_pred             CCCCCCCeECcccCchhCC-HHHHHHH------H-HHHcCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=8e-11  Score=65.99  Aligned_cols=35  Identities=31%  Similarity=0.536  Sum_probs=32.8

Q ss_pred             HHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       166 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+++|++++||+|++|++.|.+...|..|+++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   36 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG   36 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC
Confidence            56789999999999999999999999999999976

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.3e-11  Score=66.81  Aligned_cols=36  Identities=31%  Similarity=0.404  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|++++||.|++||+.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG   37 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC
Confidence            477899999999999999999999999999999975

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1e-10  Score=66.86  Aligned_cols=41  Identities=15%  Similarity=0.075  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQ-NSHLARH------R-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESS-SHHHHHH------T-HHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCC-HHHHHHH------H-HhcCCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 99999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=6.5e-11  Score=66.34  Aligned_cols=35  Identities=34%  Similarity=0.525  Sum_probs=32.8

Q ss_pred             HHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       166 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   36 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG   36 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC
Confidence            56789999999999999999999999999999975

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=66.79  Aligned_cols=41  Identities=15%  Similarity=0.050  Sum_probs=38.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSG-SYRLTQH------W-ITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSS-HHHHHHH------H-THHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            4558899999999999999 9999999      9 99999999999987

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=66.90  Aligned_cols=36  Identities=25%  Similarity=0.383  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG   37 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC
Confidence            377889999999999999999999999999999975

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.3e-11  Score=67.85  Aligned_cols=36  Identities=36%  Similarity=0.528  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ   37 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC
Confidence            477889999999999999999999999999999975

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=66.00  Aligned_cols=36  Identities=31%  Similarity=0.492  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|+++++|+|+.|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG   37 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC
Confidence            477889999999999999999999999999999976

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.97  E-value=1e-10  Score=66.97  Aligned_cols=36  Identities=28%  Similarity=0.432  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG   37 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC
Confidence            377889999999999999999999999999999976

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=66.82  Aligned_cols=35  Identities=23%  Similarity=0.441  Sum_probs=33.1

Q ss_pred             HHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       166 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+++|++++||+|++|++.|.+...|..|+++|+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG   37 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC
Confidence            67889999999999999999999999999999975

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.6e-10  Score=62.23  Aligned_cols=31  Identities=23%  Similarity=0.436  Sum_probs=15.3

Q ss_pred             CCCCCceecCc--cCcccCChHHHHHHHHHcCC
Q psy7453         142 DPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       142 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~  172 (200)
                      +++++||+|+.  |++.|...+.|..|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34445555543  55555555555555555544

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.1e-10  Score=66.83  Aligned_cols=36  Identities=25%  Similarity=0.422  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|++++||+|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG   37 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC
Confidence            477899999999999999999999999999999976

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1e-10  Score=66.12  Aligned_cols=36  Identities=31%  Similarity=0.409  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|+++++|.|++||+.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG   37 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC
Confidence            477889999999999999999999999999999976

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.96  E-value=1.2e-10  Score=65.19  Aligned_cols=35  Identities=29%  Similarity=0.534  Sum_probs=32.8

Q ss_pred             HHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       166 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+++|++++||+|++||+.|.+...|..|+++|+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ   36 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC
Confidence            56789999999999999999999999999999976

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1e-10  Score=66.28  Aligned_cols=36  Identities=22%  Similarity=0.342  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR   37 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC
Confidence            477889999999999999999999999999999975

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.96  E-value=5.7e-10  Score=59.73  Aligned_cols=34  Identities=21%  Similarity=0.296  Sum_probs=22.7

Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCCCCC
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKP  175 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~  175 (200)
                      |++++||.|++|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5566666676677767666666666666666653

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.2e-10  Score=66.53  Aligned_cols=36  Identities=31%  Similarity=0.466  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG   37 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC
Confidence            477889999999999999999999999999999986

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.2e-10  Score=66.63  Aligned_cols=36  Identities=36%  Similarity=0.598  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|++++||+|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG   37 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCC
Confidence            477889999999999999999999999999999976

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=66.48  Aligned_cols=36  Identities=36%  Similarity=0.456  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG   37 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC
Confidence            477889999999999999999999999999999976

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.7e-10  Score=62.69  Aligned_cols=33  Identities=15%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             HHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         168 RTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       168 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++|++++||.|++||+.|.+...|..|+++|+|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            469999999999999999999999999999986

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.95  E-value=4.8e-10  Score=60.82  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=33.0

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      + ++|++++||.|+.|++.|.....|..|+++|+++
T Consensus         3 ~-~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            3 T-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             S-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             C-CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            7 8999999999999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.7e-10  Score=62.88  Aligned_cols=33  Identities=27%  Similarity=0.695  Sum_probs=19.6

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHH-HHHcCC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSH-IRTHTG  172 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H-~~~H~~  172 (200)
                      ++|++++||+|+.|++.|...+.|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            455556666666666666666666666 555554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.7e-10  Score=65.27  Aligned_cols=36  Identities=22%  Similarity=0.226  Sum_probs=33.8

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA   37 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence            477889999999999999999999999999999976

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.6e-10  Score=64.61  Aligned_cols=41  Identities=12%  Similarity=0.049  Sum_probs=37.6

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~~   46 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQ-NIHLASH------L-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESS-HHHHHHH------H-HHHCCCCSSCSSCC
T ss_pred             CCCCCCCEECCcCCchhCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.7e-10  Score=65.94  Aligned_cols=36  Identities=31%  Similarity=0.429  Sum_probs=33.6

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG   37 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC
Confidence            477899999999999999999999999999999975

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=65.71  Aligned_cols=36  Identities=19%  Similarity=0.326  Sum_probs=33.5

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG   37 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC
Confidence            367889999999999999999999999999999975

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.92  E-value=5.7e-10  Score=59.63  Aligned_cols=32  Identities=22%  Similarity=0.439  Sum_probs=30.2

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            48899999999999999999999999999986

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.92  E-value=5.8e-10  Score=59.69  Aligned_cols=32  Identities=25%  Similarity=0.470  Sum_probs=30.3

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|++++||.|++||+.|.+...|..|+++|+|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            48899999999999999999999999999986

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.7e-10  Score=65.92  Aligned_cols=36  Identities=33%  Similarity=0.448  Sum_probs=33.6

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG   37 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC
Confidence            477889999999999999999999999999999975

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.91  E-value=5.5e-10  Score=62.93  Aligned_cols=40  Identities=15%  Similarity=0.117  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|+.|++.|.. .+.|.+|      + ++|++++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSE-EASLKRH------T-LQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSS-HHHHHHH------H-HHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCC-hHHHHHH------H-HhhCCCCCccCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.6e-10  Score=66.15  Aligned_cols=36  Identities=25%  Similarity=0.453  Sum_probs=33.4

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|+++++|+|++|++.|.+...|..|+++|+|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR   37 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC
Confidence            467889999999999999999999999999999864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.2e-10  Score=66.54  Aligned_cols=36  Identities=31%  Similarity=0.546  Sum_probs=33.4

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER   37 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC
Confidence            477889999999999999999999999999999864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.90  E-value=1e-09  Score=58.15  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=26.2

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCCCcc
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPYA  177 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~  177 (200)
                      +||.|++||+.|...+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47888888888888888888888888888875

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.3e-10  Score=65.82  Aligned_cols=36  Identities=25%  Similarity=0.333  Sum_probs=33.7

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|+++|++++||.|++|++.|.+...|..|+++|+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR   37 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC
Confidence            467889999999999999999999999999999986

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=9.8e-10  Score=62.67  Aligned_cols=40  Identities=13%  Similarity=0.085  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQ-NSHLVRH------R-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSS-HHHHHHH------H-TTTTTSSCCCCSC
T ss_pred             CCCCCcCeECCCCCcccCC-HHHHHHH------H-HhhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=8.8e-10  Score=62.95  Aligned_cols=40  Identities=10%  Similarity=0.100  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.+++||.|++|++.|.. ...|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRV-SSHLVQH------H-SVHSGERPSGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSS-HHHHHHH------T-TTTTSCCSCTTSC
T ss_pred             CCCCCcccCCCCCCcccCc-HHHHHHH------H-HhcCCCCCCCCCC
Confidence            4457899999999999999 9999999      9 9999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=62.37  Aligned_cols=40  Identities=15%  Similarity=0.108  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQ-TSKLARH------Q-RVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSS-HHHHHHH------G-GGGCCCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCC-HHHHHHH------H-HHcCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1e-09  Score=62.57  Aligned_cols=40  Identities=15%  Similarity=0.149  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C~~   45 (46)
T 2emg_A            6 SGTGENPFICSECGKVFTH-KTNLIIH------Q-KIHTGERPSGPSS   45 (46)
T ss_dssp             CCCSCCSCBCTTTCCBCSS-HHHHHHH------H-TTTSCCCCSCSCC
T ss_pred             CCCCCCCEECCccCcccCC-HHHHHHH------H-HHhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1e-09  Score=62.62  Aligned_cols=40  Identities=13%  Similarity=0.053  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQ-NSHLARH------R-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSS-HHHHHHH------H-TTTSCSCCSSTTC
T ss_pred             CCCCCcCeECCCCCcccCC-hhHHHHH------h-HhcCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.4e-09  Score=59.34  Aligned_cols=36  Identities=17%  Similarity=0.228  Sum_probs=31.0

Q ss_pred             CCCCCceecC--ccCcccCChHHHHHHHHHcCCCCCcc
Q psy7453         142 DPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEKPYA  177 (200)
Q Consensus       142 h~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~~~  177 (200)
                      |++++||.|+  .|++.|...+.|..|+++|+++++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            5678899999  59999999999999999999988873

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.5e-09  Score=60.49  Aligned_cols=38  Identities=18%  Similarity=0.168  Sum_probs=35.2

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQ-KGSLIVH------I-RVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSS-HHHHHTT------G-GGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCC-HHHHHHH------H-HHhCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.3e-09  Score=62.21  Aligned_cols=40  Identities=13%  Similarity=0.057  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.+++||.|++|++.|.. .+.|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQ-NSHLHSH------Q-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSS-HHHHHHH------G-GGGTTCCCSSCCC
T ss_pred             CCCCCcCCCCCCCCcccCC-HHHHHHH------H-HhcCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9.2e-10  Score=62.84  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFAR-KSTLIMH------Q-RIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCEECSSSCCEESS-HHHHHHH------H-TTTSCCCCCSSCC
T ss_pred             CcCCCCCeECCcCCcccCC-HHHHHHH------H-HHhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1e-09  Score=60.95  Aligned_cols=38  Identities=13%  Similarity=0.036  Sum_probs=35.1

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceec
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVC  150 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C  150 (200)
                      .+.++++|.|++|++.|.. ...|..|      + ++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQ-KGSLTLH------E-RIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESS-HHHHHHH------G-GGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCC-HHHHHHH------H-HHhCCCCCcCC
Confidence            3457899999999999999 9999999      9 99999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=9e-10  Score=62.56  Aligned_cols=40  Identities=13%  Similarity=0.129  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRA-KGNLVTH------Q-RIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESS-HHHHHHH------H-TTTSSCCCCCSCC
T ss_pred             CCCCCcCccCCCCCCccCC-hHHHHHH------H-HHhCCCCCCCCCC
Confidence            4458899999999999999 9999999      9 9999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=62.29  Aligned_cols=40  Identities=15%  Similarity=0.047  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQ-SSHLQTH------Q-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSS-HHHHHHH------H-TTTSSSCCCCTTC
T ss_pred             ccCCCCCeECCCCCcccCC-HHHHHHH------H-HHcCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.3e-09  Score=62.12  Aligned_cols=40  Identities=13%  Similarity=0.038  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|..|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2ep1_A            6 SGTGEKPYECSDCGKSFIK-KSQLHVH------Q-RIHTGENPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCSSSCCCCSS-HHHHHHH------H-GGGSSSCCCSSSC
T ss_pred             CCCCCCCcCCCCCCchhCC-HHHHHHH------H-HHhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=62.24  Aligned_cols=40  Identities=13%  Similarity=0.063  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. .+.|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~p~~C~~   45 (46)
T 2yts_A            6 SGTGEKPYICNECGKSFIQ-KSHLNRH------R-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCSEECSSSCCEESS-HHHHHHH------G-GGTSSCCSSCCCC
T ss_pred             CCCCCcCEECCCCChhhCC-hHHHHHH------H-HhcCCCCCcCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=62.49  Aligned_cols=40  Identities=20%  Similarity=0.172  Sum_probs=36.7

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNT-KSNLIVH------Q-RTHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCSEECSSSCCEESS-HHHHHHH------H-HTSCSSSSSCCCC
T ss_pred             CCCCCCCcCCCCCCcccCC-HHHHHHH------H-HHhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.4e-09  Score=58.93  Aligned_cols=35  Identities=23%  Similarity=0.475  Sum_probs=23.7

Q ss_pred             hcCCCCCceecCccCcccCCh-HHHHHHHHHcCCCC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNI-GCMRSHIRTHTGEK  174 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~-~~l~~H~~~H~~~k  174 (200)
                      ++|++++||.|+.|++.|... +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            456666777777777777776 67777777776653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.2e-09  Score=57.74  Aligned_cols=33  Identities=21%  Similarity=0.545  Sum_probs=22.3

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      .|++++||+|++|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            466666677777777777777777776666655

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=9.2e-10  Score=62.87  Aligned_cols=40  Identities=13%  Similarity=0.128  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|..|      + ++|++++||.|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQ-ASNFIQH------R-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSS-HHHHHHH------H-HHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCC-hHHHHHH------H-HHhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.2e-09  Score=58.70  Aligned_cols=34  Identities=32%  Similarity=0.576  Sum_probs=22.7

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      +|.+++||.|+.|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4666666777777777777667777766666653

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.2e-09  Score=62.79  Aligned_cols=41  Identities=17%  Similarity=0.062  Sum_probs=37.9

Q ss_pred             CCCCCCCcccc--cChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCcc
Q psy7453         105 NANNTFSPFCI--YCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYAC  153 (200)
Q Consensus       105 ~~~~~~~~~C~--~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C  153 (200)
                      .+.++++|.|+  .|++.|.. ...|.+|      + ++|++++||.|+.|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSR-SDELSRH------R-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESS-HHHHHHH------H-TTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCC-HHHHHHH------H-HHhCCCCCCCCCCC
Confidence            44578999998  89999999 9999999      9 99999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.4e-09  Score=61.97  Aligned_cols=40  Identities=10%  Similarity=0.025  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|..|      + ++|++++||.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRA-HSNLTTH------Q-VIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSS-HHHHHHH------H-TTTCCSCCSSCCC
T ss_pred             ccCCCCCeECCcCChhhCC-HHHHHHH------H-HHhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=2.5e-09  Score=57.44  Aligned_cols=32  Identities=41%  Similarity=0.723  Sum_probs=28.8

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|++++||.|+.|++.|.+...|..|+++|+|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            58889999999999999999999999999876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=61.96  Aligned_cols=40  Identities=15%  Similarity=0.131  Sum_probs=36.5

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|+.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSH-HASLTQH------Q-RVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSS-SHHHHHH------G-GGSCCSCCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCC-HHHHHHH------H-HHhCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999973

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=2.6e-09  Score=58.72  Aligned_cols=32  Identities=19%  Similarity=0.326  Sum_probs=28.5

Q ss_pred             HcCCCCCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .+++++||+|++  |+++|.++..|.+|+++|+|
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            367899999986  99999999999999999986

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=7e-10  Score=60.19  Aligned_cols=33  Identities=15%  Similarity=0.279  Sum_probs=30.9

Q ss_pred             HHcCCCCCcccccCcccccCH-HHHHHHHhhhcC
Q psy7453         168 RTHTGEKPYACGQCAFRSASV-AGLHYHLKKTYH  200 (200)
Q Consensus       168 ~~H~~~k~~~C~~C~k~f~~~-~~L~~H~~~h~g  200 (200)
                      ++|++++||+|++|++.|.+. ..|..|+++|+|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            468999999999999999999 999999999976

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=62.00  Aligned_cols=40  Identities=13%  Similarity=0.076  Sum_probs=36.6

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+.++++|.|++|++.|.. ...|.+|      + ++|++++||.|++
T Consensus         6 ~H~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~~   45 (46)
T 2yrj_A            6 SGTGEKPYRCGECGKAFAQ-KANLTQH------Q-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCEECSSSCCEESS-HHHHHHH------H-TTTSSCCSSCSCC
T ss_pred             CCCCCCCeECCCCCCccCC-HHHHHHH------H-HHcCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 9999999999974

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2e-09  Score=57.95  Aligned_cols=33  Identities=15%  Similarity=0.132  Sum_probs=19.8

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      .|++++||.|++|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            455556666666666666666666666666554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2e-09  Score=58.50  Aligned_cols=33  Identities=24%  Similarity=0.499  Sum_probs=30.7

Q ss_pred             HHcCCCCCcccccCcccccCHHHHHHH-HhhhcC
Q psy7453         168 RTHTGEKPYACGQCAFRSASVAGLHYH-LKKTYH  200 (200)
Q Consensus       168 ~~H~~~k~~~C~~C~k~f~~~~~L~~H-~~~h~g  200 (200)
                      ++|++++||+|+.||+.|.++..|..| +++|+|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            468999999999999999999999999 899976

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.7e-09  Score=58.27  Aligned_cols=32  Identities=22%  Similarity=0.606  Sum_probs=30.4

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|++++||+|++|++.|.+...|..|+++|+|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            58999999999999999999999999999986

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.83  E-value=1.4e-09  Score=62.91  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=26.7

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHH-HcCCCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIR-THTGEKP  175 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~k~  175 (200)
                      +|++++||.|.+||+.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4778888888888888888888888888 8887653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.6e-09  Score=58.34  Aligned_cols=32  Identities=13%  Similarity=0.165  Sum_probs=30.3

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|++++||+|++|++.|.+...|..|+++|+|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            58899999999999999999999999999986

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.8e-09  Score=61.01  Aligned_cols=39  Identities=15%  Similarity=0.129  Sum_probs=35.8

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecC
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCY  151 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~  151 (200)
                      .+.++++|.|++|++.|.. .+.|..|      + ++|++++||.|+
T Consensus         6 ~h~~~~~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~k~~~C~   44 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRH-SSLLIEH------Q-ALHAGESGPSSG   44 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSS-HHHHHHH------H-HHHTTSCCCCCC
T ss_pred             CCCCCcCeECCCCCcccCC-HHHHHHH------H-HHHCCCCCCCCC
Confidence            3457899999999999999 9999999      9 999999999985

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.5e-09  Score=57.44  Aligned_cols=33  Identities=21%  Similarity=0.351  Sum_probs=21.0

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      .|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            455666666666666666666666666666655

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.7e-09  Score=61.67  Aligned_cols=40  Identities=15%  Similarity=0.102  Sum_probs=36.5

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCC-CCceecCc
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF-RHKFVCYA  152 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~-~k~~~C~~  152 (200)
                      .+.+++||.|++|++.|.. .+.|..|      + ++|++ ++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~-~~~L~~H------~-~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSC-SKYLTQH------E-RIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCSCCEECSSSCCEESS-SHHHHHH------H-TTCCSCCTTSSSCC
T ss_pred             ccCCCCCEECcCCCCcCCC-HHHHHHH------H-HHcCCCCCCCCCCC
Confidence            3457899999999999999 9999999      9 99999 99999974

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=4.4e-09  Score=56.46  Aligned_cols=32  Identities=19%  Similarity=0.202  Sum_probs=28.0

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++++|.|++|++.|.+...|..|+++|+|
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            47888999999999999999999999998875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.80  E-value=2.6e-09  Score=58.68  Aligned_cols=31  Identities=19%  Similarity=0.291  Sum_probs=28.8

Q ss_pred             cCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         170 HTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       170 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |++++||.|++||+.|.+...|..|+++|+|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   31 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR   31 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC
Confidence            6789999999999999999999999999986

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=3.7e-09  Score=65.47  Aligned_cols=43  Identities=14%  Similarity=0.085  Sum_probs=36.9

Q ss_pred             cCCCCCCCCccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         103 RPNANNTFSPFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       103 ~~~~~~~~~~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .....++|||+|..  |++.|.. .++|.+|      ++++|+++||+.|..
T Consensus        19 ~~~~sGEKPYkC~~~~CgKaFsr-~s~L~~H------~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           19 PTRYSPYRPYRCVHQGCFAAFTI-QQNLILH------YQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSSCSSCSCBCCSTTCCCBCSS-HHHHHHH------HHHHSSSCCCCCCCS
T ss_pred             cccccCCCCeECCCCCcChhHcC-HHHHHHH------hhhhCCCCCCccccc
Confidence            34445999999975  9999999 9999999      855899999999865

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=6.2e-09  Score=55.94  Aligned_cols=33  Identities=24%  Similarity=0.419  Sum_probs=21.3

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      .|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            355566666666666666666666666666655

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4.1e-09  Score=56.69  Aligned_cols=32  Identities=19%  Similarity=0.282  Sum_probs=30.1

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|.+++||.|+.|++.|.....|..|+++|+|
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            47889999999999999999999999999986

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.74  E-value=2.2e-10  Score=70.06  Aligned_cols=46  Identities=22%  Similarity=0.299  Sum_probs=28.0

Q ss_pred             CCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHH
Q psy7453         106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGC  162 (200)
Q Consensus       106 ~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~  162 (200)
                      +.+++||.|+.|++.|.. ...|.          ++|++++||.|+.||+.|....+
T Consensus         9 H~~~k~~~C~~C~k~F~~-~~~l~----------~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTD-LEANQ----------LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCSSSEEECSSSCCEEEH-HHHHH----------HEETTTTEEBCSSSCCBCEECTT
T ss_pred             cCCCCCccCCCCCchhcc-HHHhH----------hhcCCCCCEECCCCCCccccCcc
Confidence            345666666666666666 55443          34666666777777766655443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.74  E-value=6.4e-09  Score=60.03  Aligned_cols=32  Identities=34%  Similarity=0.675  Sum_probs=22.7

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHh-hhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLK-KTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~g  200 (200)
                      +|++++||.|++||+.|.+...|..|++ +|+|
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            4677777777777777777777777777 6654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.70  E-value=7.9e-09  Score=52.13  Aligned_cols=28  Identities=21%  Similarity=0.458  Sum_probs=21.4

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++||.|++||+.|.+...|..|+++|+|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4677788888888888888888777765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=55.24  Aligned_cols=32  Identities=28%  Similarity=0.532  Sum_probs=18.9

Q ss_pred             CCCCCceecCc--cCcccCChHHHHHHHHHcCCC
Q psy7453         142 DPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       142 h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      |++++||.|++  ||+.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45556666653  666666666666666666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.69  E-value=8e-09  Score=55.99  Aligned_cols=26  Identities=15%  Similarity=0.287  Sum_probs=18.6

Q ss_pred             CCCCCceecCccCcccCChHHHHHHH
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHI  167 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~  167 (200)
                      +.+|+||+|+.||+.|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677777777777777777777776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.69  E-value=9.7e-09  Score=55.66  Aligned_cols=32  Identities=19%  Similarity=0.202  Sum_probs=29.5

Q ss_pred             HcCCCCCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|++++||.|++  ||+.|.+.+.|..|+++|+|
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            378999999994  99999999999999999986

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.3e-08  Score=55.37  Aligned_cols=31  Identities=26%  Similarity=0.450  Sum_probs=29.0

Q ss_pred             cCCCCCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         170 HTGEKPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       170 H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |++++||.|+  .|++.|.+...|..|+++|+|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            6889999999  599999999999999999975

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.5e-08  Score=62.70  Aligned_cols=42  Identities=14%  Similarity=0.086  Sum_probs=35.2

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCc
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCA  182 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~  182 (200)
                      ..|.+++||.|..|++.|...+.|..|+++|+++. ..+.+++
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            45788999999999999999999999999999874 3455544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.9e-09  Score=67.67  Aligned_cols=57  Identities=18%  Similarity=0.188  Sum_probs=50.5

Q ss_pred             CCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      -+++++.|+.|++.| . .+.|..|      .  .|.+++|+.|+.|++.|. ...|..|+++|++++
T Consensus        13 c~~r~~~C~~C~~~~-~-~~~L~~H------~--~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           13 CPLRLAVCQHCDLEL-S-ILKLKEH------E--DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCEECSSSCCEE-C-HHHHHHH------H--HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CCCcccCCcccChHh-h-HHHHHHH------H--hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            478899999999999 5 7899999      4  688999999999999987 589999999998874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.64  E-value=6.2e-09  Score=59.75  Aligned_cols=35  Identities=26%  Similarity=0.375  Sum_probs=28.1

Q ss_pred             hcCCCCCceecC--ccCcccCChHHHHHHHHHcCCCC
Q psy7453         140 RTDPFRHKFVCY--ACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       140 ~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      ..|++++||.|+  .||+.|...+.|..|+++|+|++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            568888888885  68888888888888888888764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=1.3e-08  Score=51.01  Aligned_cols=27  Identities=26%  Similarity=0.587  Sum_probs=19.4

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      ++||.|++||+.|.+...|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            467777777777777777777777664

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=1.7e-08  Score=50.42  Aligned_cols=27  Identities=33%  Similarity=0.710  Sum_probs=17.3

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      ++||.|+.||+.|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            356666666666666666666666653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=3.5e-10  Score=74.31  Aligned_cols=56  Identities=14%  Similarity=0.126  Sum_probs=47.5

Q ss_pred             CCCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         105 NANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       105 ~~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      .+.+++||.|++|++.|.. ...|..|      + ++|++++||.|..|.    ....|..|.++|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~-~~~L~~H------~-~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQS-TAELTSH------L-NIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESS-HHHHHHH------H-HHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCC-HHHHHHH------H-HHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3458899999999999999 9999999      9 999999999998765    45556677788876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.60  E-value=1.3e-08  Score=53.78  Aligned_cols=32  Identities=13%  Similarity=0.197  Sum_probs=30.1

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCcee
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV  149 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~  149 (200)
                      +||.|++|++.|.. .+.|..|      + ++|++++||.
T Consensus         1 kp~~C~~C~k~F~~-~~~L~~H------~-~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMR-SDHLSKH------I-TLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSS-HHHHHHH------H-HHHTTTCCCC
T ss_pred             CcccCCCCCchhCC-HHHHHHH------H-HHhCCCCCCC
Confidence            58999999999999 9999999      9 9999999985

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.60  E-value=3.6e-08  Score=50.14  Aligned_cols=28  Identities=18%  Similarity=0.323  Sum_probs=15.5

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      +||.|+.||+.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4555555555555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=2.8e-08  Score=50.60  Aligned_cols=28  Identities=25%  Similarity=0.425  Sum_probs=26.4

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++||.|+.||+.|.....|..|+++|+|
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            5799999999999999999999999986

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.58  E-value=1.4e-09  Score=57.22  Aligned_cols=31  Identities=16%  Similarity=0.296  Sum_probs=23.7

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCce
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKF  148 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~  148 (200)
                      +||.|++|++.|.. .+.|.+|      + ++|++++||
T Consensus         1 kp~~C~~C~k~f~~-~~~L~~H------~-~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMR-SDALSKH------I-KTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHH-HHTTSSS------T-TSSSSSSSC
T ss_pred             CCCCCCCCCcccCC-HHHHHHH------H-HHHccCCCC
Confidence            46778888888877 7777877      7 777777765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=4e-09  Score=60.55  Aligned_cols=36  Identities=11%  Similarity=0.254  Sum_probs=32.2

Q ss_pred             HHHHHcCCCCCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|..+|++++||.|+  .||+.|.+...|..|+++|+|
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            344569999999996  799999999999999999986

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.56  E-value=3e-08  Score=53.66  Aligned_cols=27  Identities=19%  Similarity=0.279  Sum_probs=25.4

Q ss_pred             cCCCCCcccccCcccccCHHHHHHHHh
Q psy7453         170 HTGEKPYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       170 H~~~k~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      +.||+||.|++||++|+++++|.+|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC
Confidence            578999999999999999999999984

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=8.3e-08  Score=59.27  Aligned_cols=40  Identities=18%  Similarity=0.135  Sum_probs=30.8

Q ss_pred             CCCCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccC
Q psy7453         106 ANNTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACD  154 (200)
Q Consensus       106 ~~~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~  154 (200)
                      ..+++||.|.+|++.|.. ++.|.+|      + ++|+++. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~-~s~L~~H------~-r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTD-ANRLRQH------E-AQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSC-HHHHHHH------H-HHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCC-HHHHHhh------h-hhhCCCc-ccccccc
Confidence            347789999999999999 9999999      8 8888764 3455554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.55  E-value=5e-08  Score=49.29  Aligned_cols=27  Identities=19%  Similarity=0.407  Sum_probs=18.3

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|++||+.|.+...|..|+++|+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            356677777777777777777766654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.54  E-value=4.4e-08  Score=49.57  Aligned_cols=27  Identities=26%  Similarity=0.408  Sum_probs=14.1

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ||.|+.||+.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.54  E-value=1.3e-08  Score=53.32  Aligned_cols=31  Identities=23%  Similarity=0.260  Sum_probs=29.4

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCCCc
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  176 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~  176 (200)
                      +||.|+.||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999987

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.54  E-value=3.7e-08  Score=49.85  Aligned_cols=27  Identities=22%  Similarity=0.368  Sum_probs=25.6

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|+.||+.|.+...|..|+++|+|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            589999999999999999999999986

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.54  E-value=6.7e-08  Score=48.79  Aligned_cols=29  Identities=34%  Similarity=0.589  Sum_probs=23.0

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      +||.|+.||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46788888888888888888888887764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.53  E-value=5.3e-08  Score=48.42  Aligned_cols=26  Identities=23%  Similarity=0.471  Sum_probs=20.4

Q ss_pred             CcccccCcccccCHHHHHHHHhhhcC
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ||.|+.||+.|.+...|..|+++|+|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57788888888888888888888775

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.51  E-value=6.5e-08  Score=50.25  Aligned_cols=28  Identities=18%  Similarity=0.344  Sum_probs=14.8

Q ss_pred             CceecC--ccCcccCChHHHHHHHHHcCCC
Q psy7453         146 HKFVCY--ACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       146 k~~~C~--~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      +||.|+  .||+.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            445555  4555555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.51  E-value=6.9e-08  Score=48.69  Aligned_cols=27  Identities=30%  Similarity=0.630  Sum_probs=15.7

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455555655555555555555555554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.50  E-value=7.7e-08  Score=49.97  Aligned_cols=28  Identities=25%  Similarity=0.472  Sum_probs=20.1

Q ss_pred             CCCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         173 EKPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       173 ~k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++||.|+  .||+.|.+...|..|+++|+|
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            4677777  677777777777777777765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.48  E-value=9.8e-08  Score=48.45  Aligned_cols=28  Identities=21%  Similarity=0.616  Sum_probs=17.2

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      ||.|+.||+.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5566666666666666666666665554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.48  E-value=6.9e-08  Score=48.68  Aligned_cols=27  Identities=22%  Similarity=0.464  Sum_probs=25.5

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|++||+.|.....|..|+++|+|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            589999999999999999999999976

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.47  E-value=8.6e-08  Score=49.43  Aligned_cols=27  Identities=22%  Similarity=0.480  Sum_probs=20.1

Q ss_pred             CCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|+  .||+.|.+...|..|+++|+|
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            467776  777777777777777777765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=1.3e-07  Score=47.07  Aligned_cols=27  Identities=33%  Similarity=0.621  Sum_probs=21.3

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      ++||.|+.||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888887774

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.46  E-value=6.4e-08  Score=48.77  Aligned_cols=27  Identities=30%  Similarity=0.432  Sum_probs=19.4

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|+.||+.|.+...|..|+++|+|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            467777777777777777777777654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.46  E-value=9.4e-08  Score=47.96  Aligned_cols=28  Identities=29%  Similarity=0.431  Sum_probs=19.8

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      ++||.|+.|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3567777777777777777777777653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.46  E-value=9.8e-08  Score=49.20  Aligned_cols=29  Identities=38%  Similarity=0.579  Sum_probs=19.8

Q ss_pred             CceecC--ccCcccCChHHHHHHHHHcCCCC
Q psy7453         146 HKFVCY--ACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       146 k~~~C~--~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      +||.|+  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            366676  67777777777777777776653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.83  E-value=2.2e-08  Score=51.14  Aligned_cols=28  Identities=36%  Similarity=0.764  Sum_probs=14.7

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      +||.|+.||+.|...+.|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            3455555555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=8.9e-08  Score=48.21  Aligned_cols=29  Identities=21%  Similarity=0.550  Sum_probs=23.4

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47888888888888888888888887764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.4e-08  Score=50.72  Aligned_cols=27  Identities=22%  Similarity=0.408  Sum_probs=18.9

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|+.||+.|.+...|..|+++|+|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            367777777777777777777777654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.44  E-value=1.1e-07  Score=48.30  Aligned_cols=27  Identities=41%  Similarity=0.753  Sum_probs=25.4

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++|.|+.||+.|.....|..|+++|+|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            589999999999999999999999976

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=2.5e-08  Score=50.87  Aligned_cols=27  Identities=30%  Similarity=0.544  Sum_probs=15.5

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|+.||+.|.+...|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            455555566666555555555555543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=2.7e-08  Score=49.21  Aligned_cols=26  Identities=31%  Similarity=0.663  Sum_probs=18.3

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhc
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      +||.|++||+.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46777777777777777777777663

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=2.8e-08  Score=50.41  Aligned_cols=27  Identities=30%  Similarity=0.540  Sum_probs=16.4

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ||.|+.||+.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            556666666666666666666666554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.42  E-value=1.1e-07  Score=47.55  Aligned_cols=26  Identities=23%  Similarity=0.493  Sum_probs=18.0

Q ss_pred             CCceecCccCcccCChHHHHHHHHHc
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      ++||.|+.||+.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35677777777777777777776665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.39  E-value=1.7e-07  Score=47.21  Aligned_cols=27  Identities=22%  Similarity=0.280  Sum_probs=20.2

Q ss_pred             CCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ++|.|+  .||+.|.+...|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            467777  777777777777777777765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.36  E-value=1.6e-07  Score=47.78  Aligned_cols=27  Identities=33%  Similarity=0.376  Sum_probs=19.6

Q ss_pred             CCcccccCcccccCHHHHHHH-HhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYH-LKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H-~~~h~g  200 (200)
                      +||.|+.||+.|.+...|..| +++|+|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            467777777777777777777 566764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.34  E-value=2e-07  Score=46.17  Aligned_cols=26  Identities=19%  Similarity=0.413  Sum_probs=15.2

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      ||.|+.||+.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35566666666666666666666554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.32  E-value=2e-07  Score=47.41  Aligned_cols=29  Identities=17%  Similarity=0.374  Sum_probs=21.8

Q ss_pred             CceecCccCcccCChHHHHHH-HHHcCCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSH-IRTHTGEK  174 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H-~~~H~~~k  174 (200)
                      +||.|+.||+.|...+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            467788888888888888888 57777764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=2e-07  Score=45.93  Aligned_cols=24  Identities=29%  Similarity=0.541  Sum_probs=13.2

Q ss_pred             ceecCccCcccCChHHHHHHHHHc
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      ||.|+.||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.10  E-value=1.7e-06  Score=43.27  Aligned_cols=27  Identities=26%  Similarity=0.461  Sum_probs=19.8

Q ss_pred             CceecC--ccCcccCChHHHHHHHHHcCC
Q psy7453         146 HKFVCY--ACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       146 k~~~C~--~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      +||.|+  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            367777  777777777777777777753

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.89  E-value=2.7e-05  Score=47.55  Aligned_cols=48  Identities=21%  Similarity=0.505  Sum_probs=36.0

Q ss_pred             ccCcccCChHHHHHHH-HHcCCCC------Ccccc--cCcccccCHHHHHHHHhhhc
Q psy7453         152 ACDYFSYNIGCMRSHI-RTHTGEK------PYACG--QCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       152 ~C~~~f~~~~~l~~H~-~~H~~~k------~~~C~--~C~k~f~~~~~L~~H~~~h~  199 (200)
                      .|++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|++..+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            3778888888888887 4676655      68885  78888888888888887643

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.52  E-value=0.00011  Score=53.70  Aligned_cols=95  Identities=16%  Similarity=0.160  Sum_probs=67.2

Q ss_pred             ccccccCcccCCCC----------CCCCccc--ccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChH
Q psy7453          94 HCKTCSYMIRPNAN----------NTFSPFC--IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIG  161 (200)
Q Consensus        94 ~C~~C~~~f~~~~~----------~~~~~~C--~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~  161 (200)
                      .|+.|...+.....          .+....|  .-|+..+..  ..|..|      . . .-.-.+..|+.|+..+ ...
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~~--~~l~~H------~-~-~C~~~~v~C~~C~~~~-~r~  123 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMEL--RHLEDH------Q-A-HCEFALMDCPQCQRPF-QKF  123 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEEG--GGHHHH------H-T-TCTTSEEECTTTCCEE-EGG
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceecH--hHHHHH------H-h-cCCceeeECCCCChHH-HHH
Confidence            67777666544211          2344567  467776655  567788      4 3 2234578999999888 567


Q ss_pred             HHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         162 CMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       162 ~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|..|....-..++-.|+.|+..+.. ..|..|..++.|
T Consensus       124 ~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~  161 (170)
T 3hcs_A          124 HINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPL  161 (170)
T ss_dssp             GHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC
T ss_pred             HHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcC
Confidence            78999987777888899999998866 467889887765

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.40  E-value=0.0002  Score=43.52  Aligned_cols=49  Identities=20%  Similarity=0.501  Sum_probs=42.5

Q ss_pred             ccChhhhccCHHHHHhchhhhhhhhhcCCCCC------ceecC--ccCcccCChHHHHHHHHHc
Q psy7453         115 IYCKAVLSTNLNELIEHCRTCKSMIRTDPFRH------KFVCY--ACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       115 ~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k------~~~C~--~C~~~f~~~~~l~~H~~~H  170 (200)
                      ..|++.|.+ ...|..|      +...|.+.+      +|.|.  .|+..+.....|..|+++.
T Consensus         7 ~~C~~~f~~-~~~l~~H------v~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASS-LFDLQRH------LLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSS-HHHHHHH------HHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCC-HHHHHHH------HHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            459999999 9999999      855787665      79997  7999999999999999874

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.16  E-value=9.6e-05  Score=50.89  Aligned_cols=30  Identities=20%  Similarity=0.390  Sum_probs=16.1

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHc
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      .|+|++||.|..|++.|.+.+.|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            344555555555555555555555555443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.81  E-value=0.00024  Score=48.88  Aligned_cols=24  Identities=17%  Similarity=0.218  Sum_probs=16.0

Q ss_pred             CCCCCcccccChhhhccCHHHHHhc
Q psy7453         107 NNTFSPFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       107 ~~~~~~~C~~C~~~f~~~~~~l~~H  131 (200)
                      .|+++|.|..|++.|.+ .+.|..|
T Consensus        46 tGekpfyC~~C~K~F~~-~~~L~~H   69 (124)
T 1zr9_A           46 PGGGLHRCLACARYFID-STNLKTH   69 (124)
T ss_dssp             GGGGCSEETTTTEECSS-HHHHHHH
T ss_pred             CCCcceEcccCcchhCC-HHHHHHH
Confidence            36666666666666666 6666666

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.71  E-value=0.0023  Score=44.37  Aligned_cols=77  Identities=14%  Similarity=0.191  Sum_probs=49.2

Q ss_pred             CCCcccccChhhhccCHHHHHhch--hhhhhhhhcCCCCCceecC------ccCcccCChHHHHHHHHHcCCCCCccccc
Q psy7453         109 TFSPFCIYCKAVLSTNLNELIEHC--RTCKSMIRTDPFRHKFVCY------ACDYFSYNIGCMRSHIRTHTGEKPYACGQ  180 (200)
Q Consensus       109 ~~~~~C~~C~~~f~~~~~~l~~H~--~~~~~~~~~h~~~k~~~C~------~C~~~f~~~~~l~~H~~~H~~~k~~~C~~  180 (200)
                      .+++.|.+|+..|.+ .+.+..|.  +.|....      +.+.+.      .=++.+....    +...+.+...|-|.+
T Consensus        30 ~~~~~C~~C~v~~~S-~s~~~~H~~gkkH~~~v------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~   98 (127)
T 1zu1_A           30 FSDTQCKVCSAVLIS-ESQKLAHYQSRKHANKV------RRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV   98 (127)
T ss_dssp             BCSSEETTTTEECCS-HHHHHHHHHCHHHHHHH------HHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT
T ss_pred             CCCCcCcCCCCEeCC-HHHHHHHHCcHHHHHHH------HHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC
Confidence            467889999999999 99999995  3332210      111110      0012222111    112355677899999


Q ss_pred             CcccccCHHHHHHHHh
Q psy7453         181 CAFRSASVAGLHYHLK  196 (200)
Q Consensus       181 C~k~f~~~~~L~~H~~  196 (200)
                      |++.|.+...|..|..
T Consensus        99 C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           99 CNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEECSSHHHHHHHHT
T ss_pred             CCCEeCCHHHHHHHHC
Confidence            9999999999999975

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.44  E-value=0.0031  Score=43.68  Aligned_cols=78  Identities=13%  Similarity=0.047  Sum_probs=47.1

Q ss_pred             CCCcccccccccccccccccccccccCcccCCCC-CCCCccccc------ChhhhccCHHHHHhchhhhhhhhhcCCCCC
Q psy7453          74 QNHSLCKHCHSQLSHLDLLDHCKTCSYMIRPNAN-NTFSPFCIY------CKAVLSTNLNELIEHCRTCKSMIRTDPFRH  146 (200)
Q Consensus        74 ~~~~~C~~C~~~f~~~~~l~~C~~C~~~f~~~~~-~~~~~~C~~------C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k  146 (200)
                      .+++.|..|+..|.+...+..+..     ...+. ..+.+.+..      =++.+.. .    .+      . ..+.+.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~-----gkkH~~~v~~~~~~~~~~~~~~~~~~~~-~----~~------~-~~~~~~~   92 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQ-----SRKHANKVRRYMAINQGEDSVPAKKFKA-A----PA------E-ISDGEDR   92 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHH-----CHHHHHHHHHHHHHTTCCCCCSCCCCSC-C----SS------C-CSSCCCT
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHC-----cHHHHHHHHHHhcccCcccCCCCCccCC-C----cc------c-cccCCCC
Confidence            467899999999998876643210     00010 111222210      0222222 1    13      3 4566677


Q ss_pred             ceecCccCcccCChHHHHHHHH
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~  168 (200)
                      .|-|..|++.|.+...+..|..
T Consensus        93 ~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           93 SKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEETTTTEECSSHHHHHHHHT
T ss_pred             CeEcCCCCCEeCCHHHHHHHHC
Confidence            8999999999999999999975

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.33  E-value=0.0022  Score=35.83  Aligned_cols=23  Identities=17%  Similarity=0.353  Sum_probs=14.4

Q ss_pred             CceecCccCcccCChHHHHHHHH
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~  168 (200)
                      .+|.|+.|+..|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34566666666666666666654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.61  E-value=0.0086  Score=33.45  Aligned_cols=21  Identities=24%  Similarity=0.374  Sum_probs=14.7

Q ss_pred             CCcccccChhhhccCHHHHHhc
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H  131 (200)
                      .+|.|+.|+..|.. ...|+.|
T Consensus        11 ~~~~CPrCn~~f~~-~~sLr~H   31 (49)
T 2e72_A           11 GRKICPRCNAQFRV-TEALRGH   31 (49)
T ss_dssp             SCCCCTTTCCCCSS-HHHHHHH
T ss_pred             CceeCCcccccccc-hHHHHhh
Confidence            46667777777777 7777777

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.48  E-value=0.0064  Score=44.06  Aligned_cols=57  Identities=14%  Similarity=0.062  Sum_probs=43.7

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHcCCCCCc
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  176 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~  176 (200)
                      .+..|+.|+..+.  +..|..|      . ...-..++..|+.|+..+. ...+..|..+++|+.++
T Consensus       109 ~~v~C~~C~~~~~--r~~l~~H------~-~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPFQ--KFHINIH------I-LKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEEE--GGGHHHH------H-HHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             eeeECCCCChHHH--HHHHHHH------h-hhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            4668999999884  5779999      7 6677788899999998775 56779999999998764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.72  E-value=0.12  Score=26.85  Aligned_cols=21  Identities=29%  Similarity=0.521  Sum_probs=13.9

Q ss_pred             cccccCcccccCHHHHHHHHh
Q psy7453         176 YACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      |.|++|.+.|.+...|..|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHH
Confidence            666666666666666666654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.81  E-value=0.13  Score=26.79  Aligned_cols=19  Identities=32%  Similarity=0.628  Sum_probs=13.0

Q ss_pred             cccccChhhhccCHHHHHhc
Q psy7453         112 PFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       112 ~~C~~C~~~f~~~~~~l~~H  131 (200)
                      |.|++|.+.|.+ ...|..|
T Consensus         6 FiCP~C~~~l~s-~~~L~~H   24 (34)
T 3mjh_B            6 FICPQCMKSLGS-ADELFKH   24 (34)
T ss_dssp             EECTTTCCEESS-HHHHHHH
T ss_pred             cCCcHHHHHcCC-HHHHHHH
Confidence            666777666666 6666666

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=89.74  E-value=0.16  Score=28.22  Aligned_cols=26  Identities=23%  Similarity=0.572  Sum_probs=15.2

Q ss_pred             Ccccccccccccccccc----cccccccCc
Q psy7453          76 HSLCKHCHSQLSHLDLL----DHCKTCSYM  101 (200)
Q Consensus        76 ~~~C~~C~~~f~~~~~l----~~C~~C~~~  101 (200)
                      .|.|-.||+.|+....-    .+|+.||..
T Consensus         3 iY~C~rCg~~fs~~el~~lP~IrCpyCGyr   32 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQLKVLPGVRCPYCGYK   32 (48)
T ss_dssp             --CCCCTTTTCCCCCSCCCSSSCCTTTCCS
T ss_pred             EEEeeccCCCccHHHHhhCCCcccCccCcE
Confidence            47788888888765532    256666643

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=89.24  E-value=0.13  Score=32.80  Aligned_cols=19  Identities=26%  Similarity=0.581  Sum_probs=9.1

Q ss_pred             eecCccCcccCChHHHHHHHHH
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      ..|-+||+.|..   |.+|+++
T Consensus        22 iiClecGK~fK~---LkRHL~~   40 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTT   40 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHH
T ss_pred             eEecccchhhHH---HHHHHHH
Confidence            445555555542   3455444

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.96  E-value=0.11  Score=32.38  Aligned_cols=17  Identities=41%  Similarity=0.622  Sum_probs=10.1

Q ss_pred             ccccChhhhccCHHHHHhc
Q psy7453         113 FCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       113 ~C~~C~~~f~~~~~~l~~H  131 (200)
                      +|++||.....  ..|...
T Consensus        10 ~~PlCG~~L~W--~eLIeQ   26 (95)
T 2k5c_A           10 KCPICGSPLKW--EELIEE   26 (95)
T ss_dssp             ECSSSCCEECH--HHHHHH
T ss_pred             cCCcCCCccCH--HHHHHH
Confidence            57777776655  345544

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=83.50  E-value=0.98  Score=23.55  Aligned_cols=22  Identities=18%  Similarity=0.262  Sum_probs=11.5

Q ss_pred             CcccccCcccccCHHHHHHHHh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      ++.|..|+-+|....++..|++
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhe
Confidence            3445555555555555555543

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=82.85  E-value=0.72  Score=30.41  Aligned_cols=26  Identities=15%  Similarity=0.464  Sum_probs=15.7

Q ss_pred             CCcccccccccccccccc-cccccccC
Q psy7453          75 NHSLCKHCHSQLSHLDLL-DHCKTCSY  100 (200)
Q Consensus        75 ~~~~C~~C~~~f~~~~~l-~~C~~C~~  100 (200)
                      .||.|..||..|...... -+|+.|+-
T Consensus        66 ~p~~C~~CG~~F~~~~~kPsrCP~CkS   92 (105)
T 2gmg_A           66 KPAQCRKCGFVFKAEINIPSRCPKCKS   92 (105)
T ss_dssp             CCCBBTTTCCBCCCCSSCCSSCSSSCC
T ss_pred             ECcChhhCcCeecccCCCCCCCcCCCC
Confidence            478899999888221111 35666653

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=82.06  E-value=0.54  Score=29.28  Aligned_cols=40  Identities=13%  Similarity=0.190  Sum_probs=24.5

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCC
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYN  159 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~  159 (200)
                      .|.|+.||..+.-  ..|..|      . ..=.+...|.|-.|++.|..
T Consensus        10 ~F~C~~Cgd~lKK--~kv~~H------~-~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A           10 FFTCNACGESVKK--IQVEKH------V-SNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             EEEESSSCCEEET--THHHHH------H-HHCTTCCEEEETTTTEEEEG
T ss_pred             EEEcCCCCCeeec--ccchhH------H-hhCCCCCcEEecccCCeeCC
Confidence            4667777766543  556677      5 33334445777777777764

>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}

Probab=82.01  E-value=0.48  Score=32.00  Aligned_cols=29  Identities=21%  Similarity=0.351  Sum_probs=22.2

Q ss_pred             CCCccccccccccccccccc-ccccccCcc
Q psy7453          74 QNHSLCKHCHSQLSHLDLLD-HCKTCSYMI  102 (200)
Q Consensus        74 ~~~~~C~~C~~~f~~~~~l~-~C~~C~~~f  102 (200)
                      +..|.|..||..|.-..... .||.||...
T Consensus        71 p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~~  100 (119)
T 2kdx_A           71 KVELECKDCSHVFKPNALDYGVCEKCHSKN  100 (119)
T ss_dssp             CCEEECSSSSCEECSCCSTTCCCSSSSSCC
T ss_pred             cceEEcCCCCCEEeCCCCCCCcCccccCCC
Confidence            34588999999988777667 788887653

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=81.76  E-value=0.65  Score=29.54  Aligned_cols=29  Identities=17%  Similarity=0.299  Sum_probs=20.9

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCc
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHK  147 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~  147 (200)
                      .+.-..|-+||+.|..    |.+|      . .+|.|..|
T Consensus        18 ~~d~iiClecGK~fK~----LkRH------L-~~~hgltp   46 (87)
T 2jsp_A           18 QDDHIVCLECGGSFKS----LKRH------L-TTHHSMTP   46 (87)
T ss_dssp             CSSCEECTBTCCEESB----HHHH------H-HHTTCSCH
T ss_pred             CCCceEecccchhhHH----HHHH------H-HHccCCCH
Confidence            4455678889998887    7788      7 77656554

>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}

Probab=81.73  E-value=0.46  Score=33.98  Aligned_cols=26  Identities=23%  Similarity=0.488  Sum_probs=16.5

Q ss_pred             CcccccccccccccccccccccccCc
Q psy7453          76 HSLCKHCHSQLSHLDLLDHCKTCSYM  101 (200)
Q Consensus        76 ~~~C~~C~~~f~~~~~l~~C~~C~~~  101 (200)
                      .|.|..||+.|........||.||..
T Consensus       132 ~y~C~~Cg~~~~~~~~~~~Cp~CG~~  157 (165)
T 2lcq_A          132 RYVCIGCGRKFSTLPPGGVCPDCGSK  157 (165)
T ss_dssp             CEEESSSCCEESSCCGGGBCTTTCCB
T ss_pred             EEECCCCCCcccCCCCCCcCCCCCCc
Confidence            46777777777654444467777654

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.03  E-value=0.72  Score=30.40  Aligned_cols=27  Identities=22%  Similarity=0.682  Sum_probs=21.3

Q ss_pred             cccccccCcccCCCCCCCCcccccChhhh
Q psy7453          93 DHCKTCSYMIRPNANNTFSPFCIYCKAVL  121 (200)
Q Consensus        93 ~~C~~C~~~f~~~~~~~~~~~C~~C~~~f  121 (200)
                      ++|..||..|  .....+|-+|+.|+-..
T Consensus        68 ~~C~~CG~~F--~~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           68 AQCRKCGFVF--KAEINIPSRCPKCKSEW   94 (105)
T ss_dssp             CBBTTTCCBC--CCCSSCCSSCSSSCCCC
T ss_pred             cChhhCcCee--cccCCCCCCCcCCCCCc
Confidence            6899999999  33456789999997543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	200
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLKKT 198
           RTH+GEKPY C  C  R      +  H+ + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 4e-05
 Identities = 5/31 (16%), Positives = 10/31 (32%)

Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLK 196
                   + Y C +C    +  + L  H +
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query: 168 RTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
           RTHTGEKPYAC  C         L  H K+
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKR 30

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKK 197
             R  TG KP+ C  C    +    L  H K+
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 8e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 148 FVCYACDY-FSYNIGCMRSHIRTHTGEKPYAC 178
           ++C +C   FS          + HT E+P+ C
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 148 FVC--YACDYFSYNIGCMRSHIRTHTGEKPYAC 178
           F C   AC         ++ H++ H+  + Y C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 170 HTGEKPYACGQCAFRSASVAGLHYHLK 196
           H+GEKPY C +C    +  + L  H +
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQR 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	200
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.79
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.69
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.49
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.46
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.46
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.43
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.42
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.42
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.4
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.35
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.35
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.34
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.34
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.25
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.19
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.18
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.18
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.17
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.15
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.15
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.14
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.12
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.06
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.0
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.98
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.97
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.96
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.94
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.93
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.9
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.83
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.83
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.83
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.8
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.71
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.71
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.66
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.65
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.55
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.53
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.53
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.45
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.45
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.38
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.26
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.21
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.21
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.16
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.93
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.9
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.78
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.78
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.78
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.75
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.7
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.61
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.6
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.52
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.46
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.44
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.42
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.39
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.38
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.36
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.35
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.34
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.33
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.22
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.21
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.13
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.13
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.12
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.09
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.0
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.88
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.81
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.62
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.52
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.36
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.3
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.14
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.02
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.98
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.96
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.9
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.85
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.64
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.58
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.27
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.52
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.29
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.06
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.9
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.07
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.98
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.2
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.58
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.18
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.12
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.7
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.63
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.38
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.36
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.07
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.78
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.36
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.66
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.52
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.26
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.49
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.17
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.5
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.06
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.45

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.4e-20  Score=109.11  Aligned_cols=53  Identities=25%  Similarity=0.442  Sum_probs=50.1

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcccccCHHHHHHHHhhh
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      ||||+|+ ||+.|.....|..|+++|+|++||.|++||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 9999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3e-18  Score=101.08  Aligned_cols=53  Identities=15%  Similarity=0.166  Sum_probs=51.2

Q ss_pred             CCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCccCcccCChHHHHHHHHHc
Q psy7453         109 TFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       109 ~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      ||||+|+ ||+.|.. ...|..|      + ++|++++||.|++||+.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~-~~~l~~H------~-~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTH-KSQRDRH------M-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESS-HHHHHHH------H-HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECC-HHHhHHH------h-hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6899995 9999999 9999999      9 9999999999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.6e-15  Score=82.25  Aligned_cols=34  Identities=29%  Similarity=0.446  Sum_probs=18.6

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ++|+++|||+|++||+.|...++|..|+++|+||
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5555555555555555555555555555555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.1e-14  Score=77.72  Aligned_cols=37  Identities=24%  Similarity=0.538  Sum_probs=30.7

Q ss_pred             CCCceecCccCcccCChHHHHHHHH-HcCCCCCccccc
Q psy7453         144 FRHKFVCYACDYFSYNIGCMRSHIR-THTGEKPYACGQ  180 (200)
Q Consensus       144 ~~k~~~C~~C~~~f~~~~~l~~H~~-~H~~~k~~~C~~  180 (200)
                      .+|||+|.+||+.|...++|..|++ +|+|||||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4688888888888888888888875 688888888874

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.4e-14  Score=75.44  Aligned_cols=32  Identities=31%  Similarity=0.522  Sum_probs=19.6

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+|+|||+|++||++|.++++|..|+++|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            35666666666666666666666666666655

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=1.3e-14  Score=78.08  Aligned_cols=34  Identities=29%  Similarity=0.502  Sum_probs=20.3

Q ss_pred             HHHHcCCCCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         166 HIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       166 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |.|+|+|||||+|++||++|+++++|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3455666666666666666666666666666554

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.6e-14  Score=76.82  Aligned_cols=36  Identities=14%  Similarity=0.278  Sum_probs=34.3

Q ss_pred             HHHHHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         165 SHIRTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       165 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+++|+++|||.|++|||+|.+.++|..|+++|+|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            478899999999999999999999999999999998

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.5e-14  Score=75.85  Aligned_cols=32  Identities=16%  Similarity=0.249  Sum_probs=17.6

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      +|+|||||+|.+||++|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45555555555555555555555555555544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1e-13  Score=72.15  Aligned_cols=33  Identities=24%  Similarity=0.369  Sum_probs=31.5

Q ss_pred             cCCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         141 TDPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       141 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      +|+|||||+|.+||++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.3e-13  Score=74.55  Aligned_cols=38  Identities=16%  Similarity=0.220  Sum_probs=34.8

Q ss_pred             CCCCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      .+|||+|++||+.|.. .++|.+|      ++++|++|+||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~-~~~L~~H------~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSR-PDHLNGH------IKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESS-HHHHHHH------HHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCC-hHHhhcc------CcCccCCCcCcCCcC
Confidence            3789999999999999 9999999      944899999999974

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=2.1e-13  Score=71.85  Aligned_cols=30  Identities=27%  Similarity=0.509  Sum_probs=17.0

Q ss_pred             cCCCCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         170 HTGEKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       170 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |+|||||+|++|++.|.++++|.+|+++|+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            455555555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=1.7e-13  Score=68.47  Aligned_cols=28  Identities=21%  Similarity=0.466  Sum_probs=23.5

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ||||+|++||++|++++.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6788888888888888888888888887

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.5e-13  Score=73.19  Aligned_cols=29  Identities=38%  Similarity=0.750  Sum_probs=15.9

Q ss_pred             HcCCCCCcccccCcccccCHHHHHHHHhh
Q psy7453         169 THTGEKPYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       169 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      +|+|||||+|++||+.|+++++|..|++.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            45555555555555555555555555443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.9e-13  Score=71.28  Aligned_cols=33  Identities=45%  Similarity=0.733  Sum_probs=31.1

Q ss_pred             HHcCCCCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         168 RTHTGEKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       168 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+|+|||||+|++||++|.+++.|..|+++|++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            579999999999999999999999999999975

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=1.3e-12  Score=70.06  Aligned_cols=34  Identities=21%  Similarity=0.208  Sum_probs=32.3

Q ss_pred             hhhcCCCCCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         138 MIRTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       138 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      . |+|+|||||+|++|++.|...++|..|+++|.+
T Consensus         3 ~-R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           3 T-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             S-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             C-CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6 999999999999999999999999999999974

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=2e-12  Score=68.03  Aligned_cols=32  Identities=22%  Similarity=0.331  Sum_probs=29.0

Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      |+|||||+|++|++.|...++|++|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.21  E-value=3.4e-12  Score=64.36  Aligned_cols=29  Identities=34%  Similarity=0.589  Sum_probs=16.1

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      |||.|++||+.|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35555555555555555555555555553

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.1e-12  Score=66.84  Aligned_cols=33  Identities=27%  Similarity=0.448  Sum_probs=29.2

Q ss_pred             hcCCCCCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         140 RTDPFRHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       140 ~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      |+|+|||||+|++|++.|...++|+.|++.+.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            579999999999999999999999999865433

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=5e-12  Score=63.02  Aligned_cols=28  Identities=36%  Similarity=0.578  Sum_probs=24.4

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      ||||+|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6888888888888888888888888876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.18  E-value=5.9e-12  Score=63.49  Aligned_cols=27  Identities=19%  Similarity=0.407  Sum_probs=26.3

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |||+|++||++|++.+.|.+|+++|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            699999999999999999999999998

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6.9e-12  Score=63.12  Aligned_cols=29  Identities=31%  Similarity=0.550  Sum_probs=15.8

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      |||.|++||+.|...+.|..|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35555555555555555555555555543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=9.9e-12  Score=65.86  Aligned_cols=32  Identities=22%  Similarity=0.543  Sum_probs=28.4

Q ss_pred             eecCc--cCcccCChHHHHHHHHHcCCCCCcccc
Q psy7453         148 FVCYA--CDYFSYNIGCMRSHIRTHTGEKPYACG  179 (200)
Q Consensus       148 ~~C~~--C~~~f~~~~~l~~H~~~H~~~k~~~C~  179 (200)
                      |.|+.  ||+.|...+.|++|+++|+|+|||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  999999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=8.6e-12  Score=62.75  Aligned_cols=27  Identities=30%  Similarity=0.513  Sum_probs=26.2

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |||.|++||++|.+++.|.+|+++|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            699999999999999999999999997

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=8e-12  Score=60.74  Aligned_cols=26  Identities=31%  Similarity=0.543  Sum_probs=19.1

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhc
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |||+|++|||+|.+++.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57777777777777777777777774

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=5.6e-12  Score=71.07  Aligned_cols=34  Identities=26%  Similarity=0.378  Sum_probs=29.0

Q ss_pred             cCCCCCceecCc--cCcccCChHHHHHHHHHcCCCC
Q psy7453         141 TDPFRHKFVCYA--CDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       141 ~h~~~k~~~C~~--C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      .|++|+||.|++  |++.|...++|..|+++|+|||
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            488888888876  8888888888888888888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.06  E-value=2.8e-12  Score=72.34  Aligned_cols=38  Identities=11%  Similarity=0.270  Sum_probs=34.2

Q ss_pred             HHHHHHHHcCCCCCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         162 CMRSHIRTHTGEKPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       162 ~l~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .+..|+ .|+|++||+|+.  |+++|+++++|..|+++|+|
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            455676 499999999987  99999999999999999997

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1e-10  Score=59.10  Aligned_cols=27  Identities=26%  Similarity=0.452  Sum_probs=21.0

Q ss_pred             CCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |||+|+.  ||++|++++.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            5777877  88888888888888888776

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.1e-10  Score=56.57  Aligned_cols=26  Identities=23%  Similarity=0.407  Sum_probs=21.1

Q ss_pred             CceecCccCcccCChHHHHHHHHHcC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.2e-10  Score=58.98  Aligned_cols=27  Identities=26%  Similarity=0.443  Sum_probs=20.6

Q ss_pred             CCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |||.|+.  ||++|++++.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            5777766  77777777777777777776

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=2.2e-10  Score=57.82  Aligned_cols=28  Identities=29%  Similarity=0.586  Sum_probs=22.4

Q ss_pred             CceecCc--cCcccCChHHHHHHHHHcCCC
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      |||.|++  ||+.|...+.|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.3e-10  Score=57.86  Aligned_cols=28  Identities=32%  Similarity=0.484  Sum_probs=24.1

Q ss_pred             CceecCc--cCcccCChHHHHHHHHHcCCC
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      |||.|++  ||+.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5888877  999999999999999888886

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.8e-10  Score=57.64  Aligned_cols=27  Identities=33%  Similarity=0.604  Sum_probs=21.7

Q ss_pred             CCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |||+|++  ||++|++.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788866  88888888888888888876

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.6e-10  Score=57.60  Aligned_cols=27  Identities=37%  Similarity=0.575  Sum_probs=12.7

Q ss_pred             ceecC--ccCcccCChHHHHHHHHHcCCC
Q psy7453         147 KFVCY--ACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       147 ~~~C~--~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ||.|+  .||+.|...++|+.|+++|+||
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            44443  2444444444444444444444

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1e-09  Score=50.66  Aligned_cols=26  Identities=19%  Similarity=0.303  Sum_probs=22.8

Q ss_pred             CcccccCcccccCHHHHHHHHhhhcC
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |.+|++|++.|+++..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56899999999999999999999887

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9.4e-10  Score=56.01  Aligned_cols=27  Identities=22%  Similarity=0.480  Sum_probs=25.3

Q ss_pred             CCcccc--cCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACG--QCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~--~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |||.|+  .||++|++.++|.+|+++|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            699995  599999999999999999997

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=2.5e-10  Score=60.27  Aligned_cols=33  Identities=21%  Similarity=0.380  Sum_probs=30.5

Q ss_pred             ccccc--ChhhhccCHHHHHhchhhhhhhhhcCCCCCceecCc
Q psy7453         112 PFCIY--CKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFVCYA  152 (200)
Q Consensus       112 ~~C~~--C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~C~~  152 (200)
                      |.|+.  |++.|.. ++.|++|      + ++|+|++||+|+.
T Consensus         2 f~C~~~~C~k~F~~-~~~L~~H------~-r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNF-KKHLKEH------M-KLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESS-HHHHHHH------H-HHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCC-hhHhccc------c-CeeCCCCCEeCCC
Confidence            67876  9999999 9999999      9 9999999999973

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.80  E-value=1.4e-09  Score=55.65  Aligned_cols=27  Identities=26%  Similarity=0.512  Sum_probs=16.3

Q ss_pred             CCCccccc--CcccccCHHHHHHHHhhhc
Q psy7453         173 EKPYACGQ--CAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       173 ~k~~~C~~--C~k~f~~~~~L~~H~~~h~  199 (200)
                      ||||.|+.  ||++|++.++|.+|+++|+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            45666655  6666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=2.6e-09  Score=53.28  Aligned_cols=27  Identities=33%  Similarity=0.588  Sum_probs=22.7

Q ss_pred             CceecCc--cCcccCChHHHHHHHHHcCC
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~~~H~~  172 (200)
                      |||.|++  |++.|...++|++|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5888877  88888888888888888876

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.5e-09  Score=53.60  Aligned_cols=26  Identities=27%  Similarity=0.551  Sum_probs=18.3

Q ss_pred             CCccccc--CcccccCHHHHHHHHhhhc
Q psy7453         174 KPYACGQ--CAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       174 k~~~C~~--C~k~f~~~~~L~~H~~~h~  199 (200)
                      |||.|+.  |||+|++.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.66  E-value=6.9e-09  Score=52.97  Aligned_cols=28  Identities=18%  Similarity=0.311  Sum_probs=20.6

Q ss_pred             CCceecCc--cCcccCChHHHHHHHHHcCC
Q psy7453         145 RHKFVCYA--CDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       145 ~k~~~C~~--C~~~f~~~~~l~~H~~~H~~  172 (200)
                      |+||.|++  ||+.|...++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            56777766  77777777777777777764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=8.2e-09  Score=49.16  Aligned_cols=27  Identities=33%  Similarity=0.525  Sum_probs=21.8

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |+||.|++||+.|+.....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578888888888888888888888774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.9e-08  Score=49.74  Aligned_cols=31  Identities=29%  Similarity=0.630  Sum_probs=24.0

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCCCc
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEKPY  176 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~  176 (200)
                      +...|+.||+.|.....|.+|..+|+|||||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4566888888888888888887788888877

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.9e-08  Score=47.98  Aligned_cols=28  Identities=32%  Similarity=0.720  Sum_probs=17.1

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ||||.|++|++.|.++.-+..|++.|-|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4566666666666666666666666544

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=1.1e-08  Score=50.40  Aligned_cols=26  Identities=31%  Similarity=0.494  Sum_probs=20.6

Q ss_pred             CceecCc--cCcccCChHHHHHHHHHcC
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~~~H~  171 (200)
                      +||.|+.  ||+.|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788876  8888888888888888875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3.9e-08  Score=45.30  Aligned_cols=26  Identities=27%  Similarity=0.524  Sum_probs=17.8

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      |.+|+.|++.|+.+..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777777664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.45  E-value=6.1e-08  Score=46.10  Aligned_cols=27  Identities=19%  Similarity=0.316  Sum_probs=23.2

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |+||.|++||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            678899999999998888888888874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=9.8e-08  Score=45.04  Aligned_cols=28  Identities=29%  Similarity=0.677  Sum_probs=15.2

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |+||+|..|...-...+.|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3455555555555555555555555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.7e-07  Score=46.31  Aligned_cols=32  Identities=13%  Similarity=0.233  Sum_probs=29.2

Q ss_pred             CCcccccChhhhccCHHHHHhchhhhhhhhhcCCCCCcee
Q psy7453         110 FSPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPFRHKFV  149 (200)
Q Consensus       110 ~~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~~k~~~  149 (200)
                      +...|+.||+.|.. ...|.+|      . ..|++||||.
T Consensus         4 k~~~ce~cgk~frd-vyhlnrh------k-lshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRD-VYHLNRH------K-LSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESS-HHHHHHH------G-GGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHH-HHHHHhh------h-cccCCCCCCC
Confidence            56789999999999 9999999      8 9999999983

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.8e-07  Score=44.37  Aligned_cols=27  Identities=33%  Similarity=0.616  Sum_probs=22.5

Q ss_pred             CCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |||.|.+  |+++|...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788876  88888888888888888776

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=4.3e-07  Score=43.77  Aligned_cols=29  Identities=24%  Similarity=0.494  Sum_probs=25.0

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ||||.|++|+..|..+..+.-|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57899999999999998888899888764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=4.8e-07  Score=42.62  Aligned_cols=29  Identities=38%  Similarity=0.756  Sum_probs=24.6

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      |+||+|..|...-.+.+.|..|.|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57888888888888888888888888874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=6.7e-07  Score=42.32  Aligned_cols=27  Identities=30%  Similarity=0.662  Sum_probs=22.4

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      |.|+.||......+.|+.|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888888764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=6.4e-07  Score=41.97  Aligned_cols=25  Identities=16%  Similarity=0.215  Sum_probs=17.5

Q ss_pred             cccccCcccccCHHHHHHHHhhhcC
Q psy7453         176 YACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..|.+|||+|...+.|++|.-+|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4577777777777777777777765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=6.4e-07  Score=41.97  Aligned_cols=26  Identities=31%  Similarity=0.494  Sum_probs=21.1

Q ss_pred             eecCccCcccCChHHHHHHHHHcCCC
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      ..|..||+.|...+.|++|..+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46888888888888888888888875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.4e-06  Score=39.31  Aligned_cols=26  Identities=35%  Similarity=0.773  Sum_probs=14.0

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhc
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |||+|..|+.+-+..++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45555555555555555555555553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=5.4e-06  Score=38.17  Aligned_cols=26  Identities=35%  Similarity=0.507  Sum_probs=16.5

Q ss_pred             ecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         149 VCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       149 ~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      +|+.|.+.|.++..|+.|-|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46666666666666666666666654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=6.7e-06  Score=42.74  Aligned_cols=26  Identities=42%  Similarity=0.714  Sum_probs=22.2

Q ss_pred             CCCCCcccccCcccccCHHHHHHHHh
Q psy7453         171 TGEKPYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       171 ~~~k~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      +|-|||.|..|+|.|-++.++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47789999999999999999988864

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=9.1e-06  Score=38.34  Aligned_cols=26  Identities=23%  Similarity=0.583  Sum_probs=24.6

Q ss_pred             CcccccCcccccCHHHHHHHHhhhcC
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      .|.|+.||...+..+-|+.|+|.|+|
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             CccccccCcccCCHHHHHHHHHHhcC
Confidence            48999999999999999999999986

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1.4e-05  Score=37.20  Aligned_cols=26  Identities=27%  Similarity=0.750  Sum_probs=21.8

Q ss_pred             CceecCccCcccCChHHHHHHHHHcC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |||+|..|+..-...++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888885

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=8.1e-06  Score=37.58  Aligned_cols=24  Identities=25%  Similarity=0.267  Sum_probs=23.1

Q ss_pred             ccccCcccccCHHHHHHHHhhhcC
Q psy7453         177 ACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       177 ~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +|+.|.+.|.++.-|+.|-|.|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            699999999999999999999997

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.75  E-value=1.2e-05  Score=36.43  Aligned_cols=24  Identities=25%  Similarity=0.479  Sum_probs=18.4

Q ss_pred             cccccCcccccCHHHHHHHHhhhc
Q psy7453         176 YACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            577778888888888888877764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.7e-05  Score=37.56  Aligned_cols=24  Identities=25%  Similarity=0.683  Sum_probs=14.9

Q ss_pred             CceecCccCcccCChHHHHHHHHH
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      +||.|..|.......++|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            456666666666666666666654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=3e-05  Score=37.15  Aligned_cols=27  Identities=26%  Similarity=0.561  Sum_probs=19.4

Q ss_pred             CceecCc--cCcccCChHHHHHHHHHcCC
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~~~H~~  172 (200)
                      |||.|.+  |++.+...++|++|++++.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777765  77777777777777776543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.60  E-value=1.7e-05  Score=37.35  Aligned_cols=24  Identities=33%  Similarity=0.567  Sum_probs=14.4

Q ss_pred             Cccccc--CcccccCHHHHHHHHhhh
Q psy7453         175 PYACGQ--CAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       175 ~~~C~~--C~k~f~~~~~L~~H~~~h  198 (200)
                      ||+|+.  |++.|+..+-|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            555643  666666666666666655

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=1.4e-05  Score=38.64  Aligned_cols=28  Identities=29%  Similarity=0.458  Sum_probs=20.1

Q ss_pred             CceecCc--cCcccCChHHHHHHH-HHcCCC
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHI-RTHTGE  173 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~-~~H~~~  173 (200)
                      +||.|+.  |.|.|.+.++-.+|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            4777766  777887777777776 677653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=3.1e-05  Score=36.50  Aligned_cols=23  Identities=35%  Similarity=0.761  Sum_probs=18.6

Q ss_pred             CcccccCcccccCHHHHHHHHhh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      ||.|..|..+|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67888888888888888888864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=5.7e-05  Score=35.52  Aligned_cols=27  Identities=15%  Similarity=0.299  Sum_probs=13.5

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      ..|.|..|...|.++-.|+.||-.|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            344455555555555555555555544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.42  E-value=7.8e-05  Score=38.32  Aligned_cols=29  Identities=14%  Similarity=0.410  Sum_probs=19.4

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGEK  174 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~k  174 (200)
                      +.|+|..|++.|.+..+|--|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45677777777777777777777765443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.3e-05  Score=35.77  Aligned_cols=27  Identities=30%  Similarity=0.699  Sum_probs=20.7

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||+|..|...-.+.++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            578888888888888888888876443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=8.3e-05  Score=34.88  Aligned_cols=25  Identities=20%  Similarity=0.327  Sum_probs=19.4

Q ss_pred             CceecCc--cCcccCChHHHHHHHHHc
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~~~H  170 (200)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3777864  888888888888888776

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.36  E-value=5.5e-05  Score=36.54  Aligned_cols=26  Identities=31%  Similarity=0.467  Sum_probs=21.1

Q ss_pred             CcccccCcccccCHHHHHHHHhh-hcC
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKK-TYH  200 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~-h~g  200 (200)
                      ||.|.+|++.|+++.-|-+|.+. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            68899999999999988888764 543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.35  E-value=6.2e-05  Score=35.50  Aligned_cols=28  Identities=32%  Similarity=0.517  Sum_probs=16.2

Q ss_pred             CceecCc--cCcccCChHHHHHHHHHcCCC
Q psy7453         146 HKFVCYA--CDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       146 k~~~C~~--C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      +||.|..  |.+.|.+...|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            3555533  666666666666666666554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=0.00013  Score=34.21  Aligned_cols=29  Identities=31%  Similarity=0.495  Sum_probs=22.9

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      |.-|.|..|...|...-.|+.|+-+|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            44578888888888888888888888775

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=7.2e-05  Score=35.38  Aligned_cols=26  Identities=42%  Similarity=0.784  Sum_probs=23.9

Q ss_pred             CCcccccCcccccCHHHHHHHHhhhc
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      +||+|..|...-+..++|+.|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999998754

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=7.9e-05  Score=38.04  Aligned_cols=27  Identities=30%  Similarity=0.557  Sum_probs=17.8

Q ss_pred             CCCCccc--ccCcccccCHHHHHHHHhhh
Q psy7453         172 GEKPYAC--GQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       172 ~~k~~~C--~~C~k~f~~~~~L~~H~~~h  198 (200)
                      ++|||.|  +-|+++|.+...|..|.+.|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3566777  44677777777777776665

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.22  E-value=9.4e-05  Score=33.38  Aligned_cols=22  Identities=23%  Similarity=0.413  Sum_probs=10.8

Q ss_pred             ecCccCcccCChHHHHHHHHHc
Q psy7453         149 VCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       149 ~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      +|..|..+|..++.|.+|+++|
T Consensus         2 kcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cccchHHHHHHHHHHHHHHHhh
Confidence            4444545555555555554444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.21  E-value=9.1e-05  Score=38.07  Aligned_cols=27  Identities=22%  Similarity=0.399  Sum_probs=24.6

Q ss_pred             CCCcccccCcccccCHHHHHHHHhhhc
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      .+.|.|..|++.|.+...|--|++.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            467999999999999999999999884

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.13  E-value=0.00011  Score=34.66  Aligned_cols=27  Identities=26%  Similarity=0.437  Sum_probs=24.7

Q ss_pred             CCccccc--CcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYACGQ--CAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C~~--C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +||.|..  |.|.|.+.-.|.+|.-+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            5899965  99999999999999999987

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.13  E-value=8.2e-05  Score=35.91  Aligned_cols=27  Identities=19%  Similarity=0.277  Sum_probs=17.0

Q ss_pred             CcccccChhhhccCHHHHHhchhhhhhhhhcCCC
Q psy7453         111 SPFCIYCKAVLSTNLNELIEHCRTCKSMIRTDPF  144 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H~~~~~~~~~~h~~  144 (200)
                      ||.|.+|++.|+. +.-|.+|      .++.|.|
T Consensus         1 Pf~C~~C~R~FaR-rDLlLRH------~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTR-RDLLIRH------AQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESS-HHHHHHH------HTTTSCC
T ss_pred             CcccccccchhhH-HHHHHHH------HHHHhcC
Confidence            5666666666666 6666666      5455554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00024  Score=36.71  Aligned_cols=26  Identities=12%  Similarity=0.169  Sum_probs=19.2

Q ss_pred             CCCCceecCccCcccCChHHHHHHHH
Q psy7453         143 PFRHKFVCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       143 ~~~k~~~C~~C~~~f~~~~~l~~H~~  168 (200)
                      +|-|||.|..|++.|-...++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35678888888888887777777743

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00029  Score=33.10  Aligned_cols=23  Identities=17%  Similarity=0.574  Sum_probs=19.2

Q ss_pred             ceecCccCcccCChHHHHHHHHH
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      ||.|..|...|..+++|..|+.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67888888888888888888875

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.00021  Score=32.18  Aligned_cols=22  Identities=27%  Similarity=0.656  Sum_probs=18.4

Q ss_pred             CcccccCcccccCHHHHHHHHh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      ||+|..|.+.|-++..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7888888888888888888874

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.88  E-value=0.0004  Score=32.02  Aligned_cols=22  Identities=23%  Similarity=0.412  Sum_probs=16.1

Q ss_pred             CcccccCcccccCHHHHHHHHh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      ||+|..||+.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5777777777777777777754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00046  Score=32.02  Aligned_cols=24  Identities=29%  Similarity=0.661  Sum_probs=14.8

Q ss_pred             CcccccCcccccCHHHHHHHHhhh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      |-+|++|..+.+++..|+.|.|+|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            345666666666666666666665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00021  Score=34.45  Aligned_cols=26  Identities=23%  Similarity=0.499  Sum_probs=23.1

Q ss_pred             CCccccc--CcccccCHHHHHHHH-hhhc
Q psy7453         174 KPYACGQ--CAFRSASVAGLHYHL-KKTY  199 (200)
Q Consensus       174 k~~~C~~--C~k~f~~~~~L~~H~-~~h~  199 (200)
                      |||.|+.  |.|+|+..+.-.+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            6999977  999999999999997 7775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.0012  Score=30.50  Aligned_cols=25  Identities=28%  Similarity=0.494  Sum_probs=20.8

Q ss_pred             ceecCccCcccCChHHHHHHHHHcC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |-+|+.|..+..++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5678888888888888888888884

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.0015  Score=29.30  Aligned_cols=22  Identities=18%  Similarity=0.381  Sum_probs=19.0

Q ss_pred             ceecCccCcccCChHHHHHHHH
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~  168 (200)
                      ||+|..|...|-.+..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7889999999999999988863

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0021  Score=32.62  Aligned_cols=28  Identities=21%  Similarity=0.317  Sum_probs=22.2

Q ss_pred             CCCceec--CccCcccCChHHHHHHHHHcC
Q psy7453         144 FRHKFVC--YACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       144 ~~k~~~C--~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      .+|||.|  +-|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4788888  558888888888888877764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.14  E-value=0.0023  Score=29.39  Aligned_cols=23  Identities=17%  Similarity=0.339  Sum_probs=19.2

Q ss_pred             ceecCccCcccCChHHHHHHHHH
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      ||+|..||+.+..+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999999899888888653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.02  E-value=0.0024  Score=28.73  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=17.7

Q ss_pred             cccccCcccccCHHHHHHHHhh
Q psy7453         176 YACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      |.|+.|-+.|.++.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.0021  Score=34.29  Aligned_cols=24  Identities=21%  Similarity=0.347  Sum_probs=18.7

Q ss_pred             CcccccCcccccCHHHHHHHHhhh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKKT  198 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~h  198 (200)
                      -|.|..|||.|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            477888888888888888887766

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0026  Score=29.29  Aligned_cols=23  Identities=30%  Similarity=0.567  Sum_probs=17.2

Q ss_pred             CcccccCcccccCHHHHHHHHhh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      .|+|+.|+-..++++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            36777777777777777777764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0028  Score=31.09  Aligned_cols=22  Identities=14%  Similarity=0.419  Sum_probs=13.6

Q ss_pred             cccccCcccccCHHHHHHHHhh
Q psy7453         176 YACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      |.|..|||+|.++..+.+|.-.
T Consensus         5 fvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhhh
Confidence            5666666666666666666543

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.004  Score=29.14  Aligned_cols=24  Identities=17%  Similarity=0.499  Sum_probs=16.0

Q ss_pred             CceecCccCcccCChHHHHHHHHH
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      +||+|+.|...-...++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            367777776666667777777653

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0028  Score=31.39  Aligned_cols=19  Identities=32%  Similarity=0.245  Sum_probs=12.2

Q ss_pred             cccCChHHHHHHHHHcCCC
Q psy7453         155 YFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       155 ~~f~~~~~l~~H~~~H~~~  173 (200)
                      +.|.....|..|+|+|+||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4466666666666666664

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0034  Score=31.09  Aligned_cols=22  Identities=9%  Similarity=-0.061  Sum_probs=18.9

Q ss_pred             ccCcccccCHHHHHHHHhhhcC
Q psy7453         179 GQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       179 ~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      +.=++.|..+..|..|+|+|||
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CCCCCcchhHHHHHHHHhhcCC
Confidence            3346789999999999999998

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.27  E-value=0.0058  Score=27.89  Aligned_cols=24  Identities=21%  Similarity=0.328  Sum_probs=16.5

Q ss_pred             ccc--ccCcccccCHHHHHHHHhhhc
Q psy7453         176 YAC--GQCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       176 ~~C--~~C~k~f~~~~~L~~H~~~h~  199 (200)
                      |.|  .-||++|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            445  347777777777777777765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.012  Score=31.27  Aligned_cols=24  Identities=21%  Similarity=0.353  Sum_probs=20.6

Q ss_pred             ceecCccCcccCChHHHHHHHHHc
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H  170 (200)
                      -|.|-.|||.|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            477999999999999999998877

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.024  Score=27.66  Aligned_cols=26  Identities=27%  Similarity=0.442  Sum_probs=19.5

Q ss_pred             ceecCccCcccCChHHHHHHHHHcCC
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRTHTG  172 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~H~~  172 (200)
                      .|.|..||+.|.....+.+|...-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888765544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.06  E-value=0.025  Score=25.87  Aligned_cols=23  Identities=30%  Similarity=0.522  Sum_probs=20.1

Q ss_pred             ceecCccCcccCChHHHHHHHHH
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      .|.|+.|+-....+++|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            47899999999999999999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.90  E-value=0.03  Score=25.00  Aligned_cols=22  Identities=18%  Similarity=0.283  Sum_probs=18.9

Q ss_pred             eecCccCcccCChHHHHHHHHH
Q psy7453         148 FVCYACDYFSYNIGCMRSHIRT  169 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~~  169 (200)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6799999999999999888775

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.07  E-value=0.032  Score=26.94  Aligned_cols=22  Identities=23%  Similarity=0.421  Sum_probs=15.5

Q ss_pred             CcccccCcccccCHHHHHHHHh
Q psy7453         175 PYACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       175 ~~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      .|-|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4667777777777777777754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.98  E-value=0.034  Score=26.26  Aligned_cols=27  Identities=30%  Similarity=0.433  Sum_probs=18.3

Q ss_pred             CCccc--ccCcccccCHHHHHHHHhhhcC
Q psy7453         174 KPYAC--GQCAFRSASVAGLHYHLKKTYH  200 (200)
Q Consensus       174 k~~~C--~~C~k~f~~~~~L~~H~~~h~g  200 (200)
                      |.|.|  +.|+-.|...-.|..|+-.|+|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            45666  3477777777777777777766

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.20  E-value=0.04  Score=25.35  Aligned_cols=19  Identities=32%  Similarity=0.600  Sum_probs=15.1

Q ss_pred             ccCcccCChHHHHHHHHHc
Q psy7453         152 ACDYFSYNIGCMRSHIRTH  170 (200)
Q Consensus       152 ~C~~~f~~~~~l~~H~~~H  170 (200)
                      -|++.|...+++++|+-+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3888888888888887766

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.58  E-value=0.093  Score=24.71  Aligned_cols=27  Identities=26%  Similarity=0.593  Sum_probs=18.0

Q ss_pred             ceecC--ccCcccCChHHHHHHHHHcCCC
Q psy7453         147 KFVCY--ACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       147 ~~~C~--~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      .|.|.  .|+..|...-.|..|.-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            45563  4777777777777777777765

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.18  E-value=0.059  Score=26.31  Aligned_cols=23  Identities=22%  Similarity=0.519  Sum_probs=13.1

Q ss_pred             CCCcccccCcccccCHHHHHHHH
Q psy7453         173 EKPYACGQCAFRSASVAGLHYHL  195 (200)
Q Consensus       173 ~k~~~C~~C~k~f~~~~~L~~H~  195 (200)
                      +..|.|.+|.+.|..-+++-+|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHH
Confidence            34455666666666666555554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.12  E-value=0.089  Score=23.79  Aligned_cols=24  Identities=25%  Similarity=0.436  Sum_probs=18.4

Q ss_pred             eec--CccCcccCChHHHHHHHHHcC
Q psy7453         148 FVC--YACDYFSYNIGCMRSHIRTHT  171 (200)
Q Consensus       148 ~~C--~~C~~~f~~~~~l~~H~~~H~  171 (200)
                      |.|  ..|++.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            445  348888888888888887775

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.12  Score=23.90  Aligned_cols=21  Identities=33%  Similarity=0.874  Sum_probs=13.4

Q ss_pred             cccccCcccccCHHHHHHHHh
Q psy7453         176 YACGQCAFRSASVAGLHYHLK  196 (200)
Q Consensus       176 ~~C~~C~k~f~~~~~L~~H~~  196 (200)
                      |.|..|||...+..+++.|+-
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            556666666666666666653

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.63  E-value=0.043  Score=27.69  Aligned_cols=26  Identities=31%  Similarity=0.649  Sum_probs=20.1

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcc
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF  183 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k  183 (200)
                      ++-|.|.+||..             |.|+-|-+|++||.
T Consensus         3 ~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCE-------------EESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCE-------------eeCCCCCcCCCCCC
Confidence            567899999854             45677888999984

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.38  E-value=0.19  Score=26.38  Aligned_cols=24  Identities=17%  Similarity=0.306  Sum_probs=13.4

Q ss_pred             CCceecCccCcccCChHHHHHHHH
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~  168 (200)
                      +.|-.|++|+.....+.+|++|..
T Consensus        22 ~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHH
Confidence            445555555555555555555544

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.36  E-value=0.042  Score=27.91  Aligned_cols=26  Identities=27%  Similarity=0.766  Sum_probs=20.1

Q ss_pred             CCceecCccCcccCChHHHHHHHHHcCCCCCcccccCcc
Q psy7453         145 RHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAF  183 (200)
Q Consensus       145 ~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k  183 (200)
                      ++-|.|.+||..+             .|+-|-.|++||.
T Consensus         3 ~~~~~C~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             CcEEECCCCCCEe-------------cCCCCCcCCCCCC
Confidence            4568999998654             4677889999974

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.07  E-value=0.053  Score=30.90  Aligned_cols=15  Identities=20%  Similarity=0.370  Sum_probs=9.3

Q ss_pred             CCCcccccChhhhcc
Q psy7453         109 TFSPFCIYCKAVLST  123 (200)
Q Consensus       109 ~~~~~C~~C~~~f~~  123 (200)
                      ...|.|+.|+++|+.
T Consensus        12 ~~~y~Cp~C~~~ys~   26 (62)
T d1vd4a_          12 RASFKCPVCSSTFTD   26 (62)
T ss_dssp             SSEEECSSSCCEEEH
T ss_pred             CCceECCCCCCCcch
Confidence            345666666666665

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.23  Score=22.87  Aligned_cols=21  Identities=24%  Similarity=0.528  Sum_probs=16.1

Q ss_pred             eecCccCcccCChHHHHHHHH
Q psy7453         148 FVCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       148 ~~C~~C~~~f~~~~~l~~H~~  168 (200)
                      |.|..||+...+...++-|..
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            678888888888877777754

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.36  E-value=0.12  Score=23.62  Aligned_cols=20  Identities=15%  Similarity=0.174  Sum_probs=18.3

Q ss_pred             cCcccccCHHHHHHHHhhhc
Q psy7453         180 QCAFRSASVAGLHYHLKKTY  199 (200)
Q Consensus       180 ~C~k~f~~~~~L~~H~~~h~  199 (200)
                      -|+|.|...+.+++|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            49999999999999999885

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.66  E-value=0.09  Score=25.28  Aligned_cols=20  Identities=25%  Similarity=0.501  Sum_probs=16.5

Q ss_pred             CcccccChhhhccCHHHHHhc
Q psy7453         111 SPFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       111 ~~~C~~C~~~f~~~~~~l~~H  131 (200)
                      .|.|.-||-+|++ .+.|..|
T Consensus         8 rf~c~pcgirfss-~stleah   27 (36)
T d1y0jb1           8 RFMCLPCGIAFSS-PSTLEAH   27 (36)
T ss_dssp             CCBCTTTCCBCSC-HHHHHHH
T ss_pred             ceeccccceeecC-hhHHHhh
Confidence            5778888888888 8888888

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.52  E-value=0.16  Score=26.70  Aligned_cols=26  Identities=27%  Similarity=0.424  Sum_probs=23.3

Q ss_pred             CCCCcccccCcccccCHHHHHHHHhh
Q psy7453         172 GEKPYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       172 ~~k~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      .+.|-.|++|+-...+..+|++|+..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999864

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.26  E-value=0.19  Score=28.43  Aligned_cols=40  Identities=15%  Similarity=0.296  Sum_probs=28.6

Q ss_pred             CCCCCceecCccCcccCChHHHHHHHHHcCCCCCcccccCccc
Q psy7453         142 DPFRHKFVCYACDYFSYNIGCMRSHIRTHTGEKPYACGQCAFR  184 (200)
Q Consensus       142 h~~~k~~~C~~C~~~f~~~~~l~~H~~~H~~~k~~~C~~C~k~  184 (200)
                      -+....|.|+.|++.|.....++-   .-...-.|.|..|+-.
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             cccCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            345567999999999987666432   3444567999999743

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.49  E-value=0.062  Score=31.12  Aligned_cols=22  Identities=23%  Similarity=0.560  Sum_probs=14.2

Q ss_pred             ceecCccCcccCChHHHHHHHH
Q psy7453         147 KFVCYACDYFSYNIGCMRSHIR  168 (200)
Q Consensus       147 ~~~C~~C~~~f~~~~~l~~H~~  168 (200)
                      .|-|..|++.|.+...|..|.+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3566666666666666666654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.17  E-value=0.09  Score=30.42  Aligned_cols=24  Identities=21%  Similarity=0.279  Sum_probs=21.4

Q ss_pred             CCcccccCcccccCHHHHHHHHhh
Q psy7453         174 KPYACGQCAFRSASVAGLHYHLKK  197 (200)
Q Consensus       174 k~~~C~~C~k~f~~~~~L~~H~~~  197 (200)
                      -.|-|..|++.|.+...|..|.++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            348899999999999999999874

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.50  E-value=0.35  Score=22.23  Aligned_cols=16  Identities=25%  Similarity=0.592  Sum_probs=9.0

Q ss_pred             CcccccCHHHHHHHHh
Q psy7453         181 CAFRSASVAGLHYHLK  196 (200)
Q Consensus       181 C~k~f~~~~~L~~H~~  196 (200)
                      |+.+|..+.+++.|..
T Consensus        10 cdl~fttkanmkkhfn   25 (31)
T d1tf3a3          10 CDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CCCEESSHHHHHHHHH
T ss_pred             cceEEeehHHHHHHHh
Confidence            5555555555555543

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.06  E-value=0.37  Score=27.14  Aligned_cols=28  Identities=25%  Similarity=0.473  Sum_probs=22.3

Q ss_pred             CceecCccCcccCChHHHHHHHHHcCCC
Q psy7453         146 HKFVCYACDYFSYNIGCMRSHIRTHTGE  173 (200)
Q Consensus       146 k~~~C~~C~~~f~~~~~l~~H~~~H~~~  173 (200)
                      .-|+|..|.-.|.+...|..|...|..|
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            3588888888888888888888888753

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.45  E-value=0.17  Score=28.61  Aligned_cols=23  Identities=26%  Similarity=0.437  Sum_probs=19.9

Q ss_pred             CCCCcccccChhhhccCHHHHHhc
Q psy7453         108 NTFSPFCIYCKAVLSTNLNELIEH  131 (200)
Q Consensus       108 ~~~~~~C~~C~~~f~~~~~~l~~H  131 (200)
                      +...|+|..|+-.|.+ ...|..|
T Consensus        15 ~s~~yQC~HCd~K~~s-~~el~~h   37 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQS-TAELTSH   37 (75)
T ss_dssp             CCSCEECSSSCCEESS-HHHHHHH
T ss_pred             CCceeeechhHHHHhh-HHHHHHH
Confidence            3457999999999999 9999999