Psyllid ID: psy7545

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
Protein Sequence
MRTRYNPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNRTKESLNPIIGCYKCYI
Secondary Structure (PSIPRED)
ccccccccccccHHHccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHHHHccccccccccccccccccccccccccEEEccccEEEcccccEEEccccccccccccHccccccHHHHcccHHHHHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHccEEEcc
Coil and Loop (DISEMBL)
mrtrynpksfNLIQEYqhenssqpfdcylqdcknyqLEESVKYWSDFmrtryhpksfNLIQEyqhenssqpfdcylqggevwkselmtedWTDKVRSFVEECdclqgfqilsdatggfgglCASSLqhlkdeystksclvfpvippqtlesnfklrNVNTALFFASLSElsdvfsplsissdcwnqtetyrkfpymeyNVRECIMKELNNSAYLECLNRTkeslnpiigcykcyi
Flexible Loop (DISEMBL)
mrtrynpksFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNrtkeslnpiigcYKCYI
Low Complexity Region (SEG)
MRTRYNPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNRTKESLNPIIGCYKCYI
Disordered region (IsUnstruct)
***********************PFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNRTKESLNPIIGCYKCY*
Disordered Region (DISOPRED)
***********************************QLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPP********LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNRTKES*NPIIGCYKCYI
Disordered Region (DISEMBL)
MRTRYNPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNRTKESLNPIIGCYKCYI
Disordered Region (DISPRO)
*********************SQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNRTKESLNPIIGCYKCYI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTRYNPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECLNRTKESLNPIIGCYKCYI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	235	2.2.26 [Sep-21-2011]
O01939	574	Protein misato OS=Drosoph	yes	N/A	0.706	0.289	0.369	2e-26
Q9BUK6	570	Protein misato homolog 1	yes	N/A	0.689	0.284	0.347	1e-23
Q5RF82	570	Protein misato homolog 1	N/A	N/A	0.689	0.284	0.347	1e-23
Q4R681	569	Protein misato homolog 1	N/A	N/A	0.689	0.284	0.347	1e-23
Q1L908	591	Protein misato homolog 1	yes	N/A	0.693	0.275	0.335	2e-23
A5D9D4	572	Protein misato homolog 1	yes	N/A	0.748	0.307	0.331	2e-23
Q2YDW2	556	Protein misato homolog 1	yes	N/A	0.727	0.307	0.337	1e-22
A1CNV1	499	Protein dml1 OS=Aspergill	N/A	N/A	0.591	0.278	0.304	3e-15
Q1E2I3	516	Protein DML1 OS=Coccidioi	N/A	N/A	0.574	0.261	0.335	4e-15
A2QAY5	487	Protein dml1 OS=Aspergill	yes	N/A	0.587	0.283	0.302	5e-15

>sp|O01939|MST_DROME Protein misato OS=Drosophila melanogaster GN=mst PE=2 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 7/173 (4%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           KNYQL  +   W DF+  RYHP++ N++     + ++Q    Y  G E+W+     E++ 
Sbjct: 150 KNYQLAATANSWVDFLYARYHPRTLNVLPGLIRDPTAQALGTYSAGTEMWQEVSFNEEFC 209

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKS---CLVFPVI---PP 146
           D++R +VEECD LQGF +L D   GFGGL    L+HL DEYS  S    L +P I   P 
Sbjct: 210 DRIRLYVEECDGLQGFHVLFDIDDGFGGLAGKCLEHLNDEYSRASFALPLHYPRITSYPQ 269

Query: 147 QTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCW-NQTETYRKFPYMEY 198
                +  +R VN  L +  LSE + +F+PLS     W N     R  P +++
Sbjct: 270 ADTRLSHSIRVVNNVLGYHQLSEQALMFTPLSTLETIWRNNNLKSRSLPGLQW 322

Drosophila melanogaster (taxid: 7227)

>sp|Q9BUK6|MSTO1_HUMAN Protein misato homolog 1 OS=Homo sapiens GN=MSTO1 PE=1 SV=1

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 5/167 (2%)

Query: 38  EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
           E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  V K     E+  D++  
Sbjct: 158 EASIRVWSDFLRVHLHPRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHF 217

Query: 98  FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRN 157
           +VEECD LQGFQIL D   GF G+ A + + L+DEYS +  + + ++P        + RN
Sbjct: 218 YVEECDYLQGFQILCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQ-RN 276

Query: 158 V----NTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNV 200
           +    NTA     L+  S +  PLS+      + E    FPY+ Y+ 
Sbjct: 277 IYRLLNTAFGLVHLTAHSSLVCPLSLGGSLGLRPEPPVSFPYLHYDA 323

Involved in the regulation of mitochondrial distribution and morphology.

Homo sapiens (taxid: 9606)

>sp|Q5RF82|MSTO1_PONPY Protein misato homolog 1 OS=Pongo pygmaeus GN=MSTO1 PE=2 SV=1

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 5/167 (2%)

Query: 38  EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
           E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  V K     E+  D++  
Sbjct: 158 EASIRVWSDFLRVHLHPRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHF 217

Query: 98  FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRN 157
           +VEECD LQGFQIL D   GF G+ A + + L+DEYS +  + + ++P        + RN
Sbjct: 218 YVEECDYLQGFQILCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQ-RN 276

Query: 158 V----NTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNV 200
           +    NTA     L+  S +  PLS+      + E    FPY+ Y+ 
Sbjct: 277 IYRLLNTAFGLVHLTAHSSLVCPLSLGGSLGLRPEPPVNFPYLHYDA 323

Involved in the regulation of mitochondrial distribution and morphology.

Pongo pygmaeus (taxid: 9600)

>sp|Q4R681|MSTO1_MACFA Protein misato homolog 1 OS=Macaca fascicularis GN=MSTO1 PE=2 SV=2

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 89/167 (53%), Gaps = 5/167 (2%)

Query: 38  EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
           E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  V K     E+  D++  
Sbjct: 158 EASIRVWSDFLRVHLHPRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHF 217

Query: 98  FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRN 157
           +VEECD LQGFQIL D   GF G+ A + + L+DEYS +  + + ++P        + RN
Sbjct: 218 YVEECDYLQGFQILCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQ-RN 276

Query: 158 V----NTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNV 200
           +    NTA     L+  S +  PLS+      + E    FPY+ Y+ 
Sbjct: 277 IYRLLNTAFGLVHLTAHSSLVCPLSLGGSLGLRPEPPVNFPYLHYDA 323

Involved in the regulation of mitochondrial distribution and morphology.

Macaca fascicularis (taxid: 9541)

>sp|Q1L908|MSTO1_DANRE Protein misato homolog 1 OS=Danio rerio GN=msto1 PE=2 SV=1

 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 4/167 (2%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K+Y+LE SV+ WSDF+R   HP++ ++I +Y H+  S+  + + QG  + + +++ ED  
Sbjct: 161 KSYRLEGSVRVWSDFLRLHLHPRTISVINQYNHDGESERLEVFGQGEALLQGQVL-EDLE 219

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP---PQTL 149
           D++  F+EECD LQGFQ+L D T GF GL +   ++L+D Y  +  L + V P   P T 
Sbjct: 220 DRLHFFIEECDYLQGFQVLCDLTDGFSGLGSKVTEYLQDSYGGRGILTWGVAPVNHPDTS 279

Query: 150 ESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYM 196
                   +N AL    ++  S +F PL++      +      FP +
Sbjct: 280 SMKDLYHMMNCALGTLQMANHSSLFCPLTLRGGLCRRPPPPTAFPLL 326

Involved in the regulation of mitochondrial distribution and morphology.

Danio rerio (taxid: 7955)

>sp|A5D9D4|MSTO1_BOVIN Protein misato homolog 1 OS=Bos taurus GN=MSTO1 PE=2 SV=2

 Score =  108 bits (271), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 5/181 (2%)

Query: 24  PFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWK 83
           PF   +        E S++ WSDF+R   HP+S  +I +Y H+  +   + + QG  + K
Sbjct: 144 PFTNAITPKPVMPTEGSIRVWSDFLRVHLHPRSICMIHKYNHDGEAGRLEAFGQGESILK 203

Query: 84  SELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPV 143
                E+  D++  +VEECD LQGFQIL D   GF GL A + + L+DEYS +  + + +
Sbjct: 204 EPKYLEELEDRLHFYVEECDYLQGFQILCDLHDGFSGLGAKAAELLQDEYSGRGIITWGL 263

Query: 144 IPP----QTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
           +P       L+ N   R +NTA     LS  S +  PLS+      + E    FP ++Y+
Sbjct: 264 LPGPYRLGELQKNI-YRLLNTAFGLVHLSAHSSLVCPLSLGGSLGLRPEPPVSFPLLQYD 322

Query: 200 V 200
            
Sbjct: 323 A 323

Involved in the regulation of mitochondrial distribution and morphology.

Bos taurus (taxid: 9913)

>sp|Q2YDW2|MSTO1_MOUSE Protein misato homolog 1 OS=Mus musculus GN=Msto1 PE=2 SV=1

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 4/175 (2%)

Query: 29  LQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMT 88
           +Q+ +N + E S+K WSDF+R   HP+S  +I +Y H+  +   + + QG  V K     
Sbjct: 136 IQNIQNGK-ENSIKVWSDFLRVHLHPRSICVIHKYHHDGETGRLEAFGQGESVLKEPRYL 194

Query: 89  EDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQ 147
           E+  D++  +VEECD LQGFQ+L D   GF G+ A + + L+DEY+ +  L + ++P P 
Sbjct: 195 EELEDRLHFYVEECDYLQGFQLLCDLHDGFSGVGAKTAELLQDEYAGRGVLTWGLLPGPY 254

Query: 148 TLESNFK--LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNV 200
           +L    K   R +NTA     L+  S    PLS+  +   + +    FP + Y+ 
Sbjct: 255 SLGEPQKNIYRLLNTAFGLVHLTGYSSFVCPLSLGGNLGLRPKPPVNFPSLHYDA 309

Involved in the regulation of mitochondrial distribution and morphology.

Mus musculus (taxid: 10090)

>sp|A1CNV1|DML1_ASPCL Protein dml1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dml1 PE=3 SV=1

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 2/141 (1%)

Query: 39  ESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDK-VRS 97
           E+V+YWSD+ R  YHP+S   + +Y+  +   PF+ +  G +++       D  D+ VR 
Sbjct: 125 ETVRYWSDYNRVFYHPRSIIQLNDYELNSKIMPFEDWDVGEDLFNDLDKEHDLLDRDVRP 184

Query: 98  FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKL-R 156
           F EECD L+ FQ+ + +   +GG  A  L  ++DEY  K+  V+ +     L+   +L R
Sbjct: 185 FAEECDQLRAFQLFAGSDDAWGGFAAKYLDRIRDEYGKKAVWVWAMEGGSKLQRRNQLKR 244

Query: 157 NVNTALFFASLSELSDVFSPL 177
           ++N A    +++  S ++ P+
Sbjct: 245 DINKARSIHAMAPQSSLYVPI 265

Involved in the partitioning of the mitochondrial organelle and mitochondrial DNA (mtDNA) inheritance.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

>sp|Q1E2I3|DML1_COCIM Protein DML1 OS=Coccidioides immitis (strain RS) GN=DML1 PE=3 SV=2

 Score = 82.0 bits (201), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 14/149 (9%)

Query: 39  ESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDK-VRS 97
           E+V+YWSDF R  YHPKS   + EY+  +   PF+ +  G   + S     D  D+  R 
Sbjct: 125 ETVRYWSDFNRLFYHPKSIVQLNEYEMNSQLMPFEDWTVGEAFFNSLDREHDLLDRDFRP 184

Query: 98  FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFK--- 154
           F EECD L+G Q+ +     +GG  A  +  L+DE+  K    F       LES  K   
Sbjct: 185 FAEECDQLRGIQLFTGTDDAWGGFAARYIDRLRDEFGKKIIWTF------ALESGLKTER 238

Query: 155 ----LRNVNTALFFASLSELSDVFSPLSI 179
               LR  N+A   + +S  S  + P+S+
Sbjct: 239 EKQFLRAKNSAKSISEISRQSTAYVPISM 267

Involved in the partitioning of the mitochondrial organelle and mitochondrial DNA (mtDNA) inheritance.

Coccidioides immitis (strain RS) (taxid: 246410)

>sp|A2QAY5|DML1_ASPNC Protein dml1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dml1 PE=3 SV=1

 Score = 81.3 bits (199), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 4/142 (2%)

Query: 39  ESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDK-VRS 97
           E+V+YWSD+ R  YHP+S   + +Y+  +   PF+ +  G E++       D  D+ VR 
Sbjct: 125 ETVRYWSDYNRLFYHPRSIVQLNDYELNSKIMPFEDWTIGEELFNELDKEHDLLDRDVRP 184

Query: 98  FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLE--SNFKL 155
           F EECD L+  Q+ + +   +GG  A  +  ++DEY  KS  V+ +   + ++  + FK 
Sbjct: 185 FAEECDQLRALQVFTGSDDAWGGFAAKYIDRIRDEYGKKSVWVWAIENGKKVDRQTQFK- 243

Query: 156 RNVNTALFFASLSELSDVFSPL 177
           R++N A    ++S  + +++P+
Sbjct: 244 RDLNKARSVHAISTQASLYAPI 265

Involved in the partitioning of the mitochondrial organelle and mitochondrial DNA (mtDNA) inheritance.

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
332374418	551	unknown [Dendroctonus ponderosae]	0.710	0.303	0.411	4e-36
328718132	550	PREDICTED: protein misato homolog 1-like	0.706	0.301	0.434	4e-36
157120354	561	hypothetical protein AaeL_AAEL008947 [Ae	0.825	0.345	0.388	2e-32
91084335	512	PREDICTED: similar to misato CG1424-PA [	0.604	0.277	0.445	2e-32
383864873	538	PREDICTED: protein misato-like [Megachil	0.693	0.302	0.403	6e-31
156357532	561	predicted protein [Nematostella vectensi	0.702	0.294	0.411	7e-31
170053562	558	misato [Culex quinquefasciatus] gi|16787	0.693	0.292	0.394	3e-30
347968536	573	AGAP002778-PA [Anopheles gambiae str. PE	0.706	0.289	0.402	6e-30
312383792	569	hypothetical protein AND_02930 [Anophele	0.782	0.323	0.362	9e-30
156544760	541	PREDICTED: protein misato-like [Nasonia	0.634	0.275	0.407	7e-29

>gi|332374418|gb|AEE62350.1| unknown [Dendroctonus ponderosae]

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 13/180 (7%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K Y LE+ V+ WSDF+ +R+HP++ N+I++YQH N+  PFD Y  G  +WKSE+  + ++
Sbjct: 128 KKYNLEQDVQVWSDFLYSRFHPRTVNVIKQYQHCNAETPFDSYSLGAALWKSEVFEDRFS 187

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESN 152
           D +R +VEECD  QGF IL+D T GF GL ++ L+H++DEY  KS LV P IP    +++
Sbjct: 188 DDIRRYVEECDHFQGFHILTDCTNGFAGLSSACLEHIRDEYDRKSVLVLPTIPAHFPDND 247

Query: 153 FK-------------LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
           F+              R +N  L F +  E S +F PL  S   W Q    R+F + +YN
Sbjct: 248 FQTAHEQVYSLMNDSTRVINLLLSFNTYREFSSMFVPLCTSEAGWRQPGLPRQFHHTQYN 307

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328718132|ref|XP_001945861.2| PREDICTED: protein misato homolog 1-like [Acyrthosiphon pisum]

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 108/168 (64%), Gaps = 2/168 (1%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K Y L+  VK WSDF++ R+HP++   I EY+H +SS  F+ + QG  +W S +M E WT
Sbjct: 138 KVYNLDNDVKIWSDFLKARFHPRTITSIDEYKHNDSSNVFNNFAQGLGLWDSYIMKETWT 197

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTL--E 150
           D +R + EECD LQGF I  D+  GFGGL   +L++LKDEYS K+ +  PV+    +  +
Sbjct: 198 DNLRLYAEECDYLQGFHISMDSLNGFGGLACKALEYLKDEYSNKTIIAMPVLSDNYILED 257

Query: 151 SNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEY 198
            N +L+ VNT+L F+SL E S +F PL+ SS  W +++++    Y+ Y
Sbjct: 258 ENSELQAVNTSLLFSSLFEHSTMFVPLTTSSGGWIKSQSHLNLDYLSY 305

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157120354|ref|XP_001653622.1| hypothetical protein AaeL_AAEL008947 [Aedes aegypti] gi|108875003|gb|EAT39228.1| AAEL008947-PA, partial [Aedes aegypti]

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 111/206 (53%), Gaps = 12/206 (5%)

Query: 35  YQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDK 94
           Y  +++V+ W DF  +R+HP+S N++ EY H      FD    G E+W++    ++ TDK
Sbjct: 139 YNFKDTVQDWIDFSYSRFHPRSINMVNEYSHSKEENLFDTITNGMELWRNCDFQDEITDK 198

Query: 95  VRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFK 154
           VR +VEECD  QGFQ L D   GF GL    L+HL+DEY  K+ LVFP+IPP+ L  NFK
Sbjct: 199 VRQYVEECDGCQGFQTLFDCVDGFAGLGVKCLEHLQDEYG-KASLVFPLIPPRML--NFK 255

Query: 155 ---------LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIM 205
                    +R VNTAL F++L E   +F PLS    CW   +  R FP + Y       
Sbjct: 256 NADETMTTSIRVVNTALCFSNLIESCSLFVPLSTMGRCWGNLDQPRSFPLVSYEESNLYQ 315

Query: 206 KELNNSAYLECLNRTKESLNPIIGCY 231
                + +L+ ++      NP  G Y
Sbjct: 316 TSALLATFLDTVSLRYRMKNPSQGNY 341

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91084335|ref|XP_972672.1| PREDICTED: similar to misato CG1424-PA [Tribolium castaneum] gi|270008822|gb|EFA05270.1| hypothetical protein TcasGA2_TC015425 [Tribolium castaneum]

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 95/146 (65%), Gaps = 4/146 (2%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K Y LE  V+ WSDF+ TR+HP++ N +QEYQH+N + PFD +  G  +WK +  +ED++
Sbjct: 115 KIYDLERQVRVWSDFLYTRFHPRTVNTVQEYQHDNENTPFDIFPLGANLWKKDQFSEDFS 174

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESN 152
           DK+R+++EEC+  QGF IL D+T  F G+  S L+HL D+Y TK  L FP++ P T    
Sbjct: 175 DKIRNYIEECNSFQGFHILCDSTDAFAGITVSCLEHLNDDYDTKPVLGFPLVQPST---- 230

Query: 153 FKLRNVNTALFFASLSELSDVFSPLS 178
             +  +N AL F   +E S +F PL+
Sbjct: 231 NPIHLLNLALCFDGFAEHSSLFVPLT 256

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864873|ref|XP_003707902.1| PREDICTED: protein misato-like [Megachile rotundata]

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 106/166 (63%), Gaps = 3/166 (1%)

Query: 37  LEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVR 96
           LE+ V +W D++  R+HP++ N+I+EY+H  ++QPF+ +  G  +W +E  +ED+ D++R
Sbjct: 129 LEDYVNWWVDYLVPRFHPRTVNIIKEYKHGCTTQPFNIFTYGRSLWNTEQFSEDFADRIR 188

Query: 97  SFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFK-- 154
           ++VEECD +QGFQI+ D+  GF GL  S +Q+LKDEY  KS L FP I  +T E +    
Sbjct: 189 AYVEECDLMQGFQIILDSVDGFAGLGTSCMQYLKDEYE-KSILSFPCIDSKTSEPSVSNL 247

Query: 155 LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNV 200
           ++++NTAL +    E S ++SPL      W Q    R F ++ Y+ 
Sbjct: 248 IKSLNTALCWQHAGEYSSLYSPLCCGEAGWPQAGEPRAFNHLIYDA 293

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156357532|ref|XP_001624271.1| predicted protein [Nematostella vectensis] gi|156211037|gb|EDO32171.1| predicted protein [Nematostella vectensis]

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 100/170 (58%), Gaps = 5/170 (2%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K Y L++ +  WSDF+ T+ HP+S N+I EY H+    PF  Y  G  ++  E   +++ 
Sbjct: 143 KVYNLDDEIVVWSDFLGTQLHPRSVNIINEYSHDADMSPFSVYGYGQSLYNDESFRDNFE 202

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQ----T 148
           D +R F EECD LQGFQIL+D   GFGGL +  L+ L+DEY++KS +    +P       
Sbjct: 203 DGLRFFAEECDRLQGFQILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPAHFKDTD 262

Query: 149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEY 198
            E N K R +N AL F+ ++E  D+F PL +S   W +  TY  FPY+ Y
Sbjct: 263 QEHNVK-RILNMALSFSQITEHCDLFVPLCVSKQVWPKPGTYVTFPYLNY 311

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|170053562|ref|XP_001862732.1| misato [Culex quinquefasciatus] gi|167874041|gb|EDS37424.1| misato [Culex quinquefasciatus]

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 12/175 (6%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K+Y  +E+VK W DF  +RYHP+S +++ +Y H      FD    G ++W      +++T
Sbjct: 133 KDYNFKETVKDWIDFSYSRYHPRSIHIVNQYSHSKEENQFDTITNGMQLWHDFDFQDEFT 192

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESN 152
           DK+R ++EECD  QGFQ + D   GF G+    L+HL+DEY  K+ LVFPVIPP  L  N
Sbjct: 193 DKIRQYLEECDGCQGFQTIMDCVDGFSGVGVKMLEHLQDEYG-KASLVFPVIPPAIL--N 249

Query: 153 FK---------LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEY 198
           FK         +R +NTAL  ++L E   +F PLS    CW   +  R + ++ Y
Sbjct: 250 FKNADKTMSSSVRVINTALAVSNLVECCSLFVPLSTMGRCWRDLDKPRTWSHLSY 304

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347968536|ref|XP_312145.4| AGAP002778-PA [Anopheles gambiae str. PEST] gi|333467959|gb|EAA07891.4| AGAP002778-PA [Anopheles gambiae str. PEST]

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 97/174 (55%), Gaps = 8/174 (4%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K+Y    +V+ W D+  TRYHP+S N+I+ Y H      FD    G E+WK     +++T
Sbjct: 143 KDYNFAATVQDWIDYSYTRYHPRSINVIERYTHSREEAQFDTITNGMELWKDYDFQDEFT 202

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQ--TLE 150
           D+ R ++EECD  QGFQ+L D   GF G+    L+HL+DEY  K+ L FPV PP+  T +
Sbjct: 203 DRARQYIEECDGCQGFQMLFDCVDGFSGVAIKLLEHLQDEYG-KATLPFPVFPPKAPTFK 261

Query: 151 S-----NFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
           S     +  +R VNTAL FA L +   +F PLS    CW      R  P + Y+
Sbjct: 262 SADEPMSHSIRVVNTALAFAQLPDQCSLFVPLSTMGRCWRNVAEPRALPNLLYD 315

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383792|gb|EFR28730.1| hypothetical protein AND_02930 [Anopheles darlingi]

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 104/196 (53%), Gaps = 12/196 (6%)

Query: 32  CKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDW 91
            K+Y    +V  WSD+   RYHP+S N+I+ Y +  +   FD +  G  +W+     E+ 
Sbjct: 135 AKDYDFRNTVHSWSDYAYARYHPRSINIIERYAYSPTEAQFDTFPNGRGLWQEVDFQENL 194

Query: 92  TDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLES 151
           TD++R ++EECD  QGFQ L D T  F GL    L+HL DEY  K+ LVFP+  P++   
Sbjct: 195 TDRIRQYIEECDECQGFQTLFDCTDAFTGLTIGLLEHLHDEYG-KASLVFPLFSPRS--P 251

Query: 152 NFK---------LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRE 202
            FK         +R VNT L FA L E   +F+PL+  + CW   ET R  P + Y+   
Sbjct: 252 TFKGADEATSDSIRVVNTGLAFAHLHEHCSLFAPLATMAQCWRTMETPRPLPGLSYDPHS 311

Query: 203 CIMKELNNSAYLECLN 218
                   +++LE ++
Sbjct: 312 LYQTSAILASFLETVS 327

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544760|ref|XP_001606064.1| PREDICTED: protein misato-like [Nasonia vitripennis]

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 95/152 (62%), Gaps = 3/152 (1%)

Query: 35  YQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDK 94
           +  E   K W D++  R+H ++ N+I EY+H ++SQPFD +  G  +WK    +ED+ DK
Sbjct: 128 FDFENETKSWVDYLIPRFHSRTVNVITEYEHGSTSQPFDLFPYGQSLWKRSAFSEDFADK 187

Query: 95  VRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFK 154
           +R +VEECD +QGFQ+L D   GF GL A+ +QHL+DEY  KS L +PV+     E +  
Sbjct: 188 IRVYVEECDLMQGFQVLFDTDDGFSGLGAACIQHLRDEYG-KSILTWPVLDSTPREKSIS 246

Query: 155 --LRNVNTALFFASLSELSDVFSPLSISSDCW 184
              + +NT L + ++ E + +FSPLS  ++ W
Sbjct: 247 DYAKAINTVLCWHNIGENTSLFSPLSCGTNGW 278

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	235
FB|FBgn0020272	574	mst "misato" [Drosophila melan	0.842	0.344	0.350	1.3e-25
RGD|1306110	553	Msto1 "misato homolog 1 (Droso	0.689	0.292	0.369	1e-23
ZFIN|ZDB-GENE-030131-6238	591	msto1 "misato homolog 1 (Droso	0.693	0.275	0.335	4.5e-23
UNIPROTKB|F1RX98	480	LOC100153122 "Uncharacterized	0.689	0.337	0.351	7.9e-23
UNIPROTKB|Q4R681	569	MSTO1 "Protein misato homolog	0.689	0.284	0.357	1.1e-22
UNIPROTKB|Q9BUK6	570	MSTO1 "Protein misato homolog	0.689	0.284	0.357	1.1e-22
UNIPROTKB|Q5RF82	570	MSTO1 "Protein misato homolog	0.689	0.284	0.357	1.1e-22
UNIPROTKB|F1RLM2	570	MSTO1 "Uncharacterized protein	0.689	0.284	0.351	1.4e-22
UNIPROTKB|J9P0H7	515	MSTO1 "Uncharacterized protein	0.795	0.363	0.310	1.7e-22
UNIPROTKB|A5D9D4	572	MSTO1 "Protein misato homolog	0.689	0.283	0.357	1.8e-22

FB|FBgn0020272 mst "misato" [Drosophila melanogaster (taxid:7227)]

 Score = 297 (109.6 bits), Expect = 1.3e-25, P = 1.3e-25
 Identities = 74/211 (35%), Positives = 109/211 (51%)

Query:    33 KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
             KNYQL  +   W DF+  RYHP++ N++     + ++Q    Y  G E+W+     E++ 
Sbjct:   150 KNYQLAATANSWVDFLYARYHPRTLNVLPGLIRDPTAQALGTYSAGTEMWQEVSFNEEFC 209

Query:    93 DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSC---LVFPVIP--PQ 147
             D++R +VEECD LQGF +L D   GFGGL    L+HL DEYS  S    L +P I   PQ
Sbjct:   210 DRIRLYVEECDGLQGFHVLFDIDDGFGGLAGKCLEHLNDEYSRASFALPLHYPRITSYPQ 269

Query:   148 T-LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCW-NQTETYRKFPYMEY---NVRE 202
                  +  +R VN  L +  LSE + +F+PLS     W N     R  P +++   N+ +
Sbjct:   270 ADTRLSHSIRVVNNVLGYHQLSEQALMFTPLSTLETIWRNNNLKSRSLPGLQWETDNLYQ 329

Query:   203 --CIMKELNNSAYLEC-LNRTKESLNPIIGC 230
                ++    ++A L   L +T ESL     C
Sbjct:   330 TSALLAAFFDTATLSYRLRQTPESLLRFCEC 360

GO:0000070 "mitotic sister chromatid segregation" evidence=IMP

GO:0005856 "cytoskeleton" evidence=ISS

GO:0003674 "molecular_function" evidence=ND

GO:0043234 "protein complex" evidence=IEA

GO:0051258 "protein polymerization" evidence=IEA

GO:0090307 "spindle assembly involved in mitosis" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

RGD|1306110 Msto1 "misato homolog 1 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 279 (103.3 bits), Expect = 1.0e-23, P = 1.0e-23
 Identities = 61/165 (36%), Positives = 91/165 (55%)

Query:    38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
             E S+K WSDF+R   HP+S  +IQ+Y H+  +   + + QG  V K     E+  D++  
Sbjct:   141 ENSIKVWSDFLRVHLHPRSICVIQKYNHDGETGRLEAFGQGESVLKEPRYLEELEDRLHF 200

Query:    98 FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQTLESNFK-- 154
             +VEECD LQGFQIL D   GF G+ A + + L+DEYS +  L + ++P P +L    K  
Sbjct:   201 YVEECDYLQGFQILCDLHDGFSGVGAKTAELLQDEYSGRGVLTWGLLPGPYSLGEPQKNI 260

Query:   155 LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
              R +NTA     L+  S    PLS+  +   + +    FPY+ Y+
Sbjct:   261 YRLLNTAFGLVHLAGYSSFVCPLSLGGNLGLRPKPPVNFPYLHYD 305

GO:0005737 "cytoplasm" evidence=ISO

GO:0005741 "mitochondrial outer membrane" evidence=IEA;ISO

GO:0007005 "mitochondrion organization" evidence=ISO

GO:0043234 "protein complex" evidence=IEA

GO:0048311 "mitochondrion distribution" evidence=IEA;ISO

GO:0051258 "protein polymerization" evidence=IEA

ZFIN|ZDB-GENE-030131-6238 msto1 "misato homolog 1 (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 274 (101.5 bits), Expect = 4.5e-23, P = 4.5e-23
 Identities = 56/167 (33%), Positives = 92/167 (55%)

Query:    33 KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
             K+Y+LE SV+ WSDF+R   HP++ ++I +Y H+  S+  + + QG  + + +++ ED  
Sbjct:   161 KSYRLEGSVRVWSDFLRLHLHPRTISVINQYNHDGESERLEVFGQGEALLQGQVL-EDLE 219

Query:    93 DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP---PQTL 149
             D++  F+EECD LQGFQ+L D T GF GL +   ++L+D Y  +  L + V P   P T 
Sbjct:   220 DRLHFFIEECDYLQGFQVLCDLTDGFSGLGSKVTEYLQDSYGGRGILTWGVAPVNHPDTS 279

Query:   150 ESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYM 196
                     +N AL    ++  S +F PL++      +      FP +
Sbjct:   280 SMKDLYHMMNCALGTLQMANHSSLFCPLTLRGGLCRRPPPPTAFPLL 326

GO:0043234 "protein complex" evidence=IEA

GO:0051258 "protein polymerization" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005741 "mitochondrial outer membrane" evidence=IEA

UNIPROTKB|F1RX98 LOC100153122 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 269 (99.8 bits), Expect = 7.9e-23, P = 7.9e-23
 Identities = 58/165 (35%), Positives = 90/165 (54%)

Query:    38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
             E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  + K     E   D++  
Sbjct:   131 EGSIRVWSDFLRVHLHPRSICMIQKYNHDGETGRLEAFGQGESILKEPKYLEALEDRLHF 190

Query:    98 FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQTLESNFK-- 154
             +VEECD LQGFQ+L D   GF G+ A + + L+DEYS +  + + ++P P  L    K  
Sbjct:   191 YVEECDYLQGFQVLCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYRLGEPQKNI 250

Query:   155 LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
              R +NTA     LS  S +  PLS+      + E    FP+++Y+
Sbjct:   251 YRLLNTAFGLVHLSAHSSLVCPLSLGGSLGLRPEPPVSFPHLQYD 295

GO:0005525 "GTP binding" evidence=IEA

GO:0051258 "protein polymerization" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

UNIPROTKB|Q4R681 MSTO1 "Protein misato homolog 1" [Macaca fascicularis (taxid:9541)]

 Score = 270 (100.1 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 59/165 (35%), Positives = 91/165 (55%)

Query:    38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
             E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  V K     E+  D++  
Sbjct:   158 EASIRVWSDFLRVHLHPRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHF 217

Query:    98 FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQTL-ESNFKL 155
             +VEECD LQGFQIL D   GF G+ A + + L+DEYS +  + + ++P P    E+   +
Sbjct:   218 YVEECDYLQGFQILCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNI 277

Query:   156 -RNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
              R +NTA     L+  S +  PLS+      + E    FPY+ Y+
Sbjct:   278 YRLLNTAFGLVHLTAHSSLVCPLSLGGSLGLRPEPPVNFPYLHYD 322

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0007005 "mitochondrion organization" evidence=ISS

GO:0048311 "mitochondrion distribution" evidence=ISS

UNIPROTKB|Q9BUK6 MSTO1 "Protein misato homolog 1" [Homo sapiens (taxid:9606)]

 Score = 270 (100.1 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 59/165 (35%), Positives = 91/165 (55%)

Query:    38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
             E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  V K     E+  D++  
Sbjct:   158 EASIRVWSDFLRVHLHPRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHF 217

Query:    98 FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQTL-ESNFKL 155
             +VEECD LQGFQIL D   GF G+ A + + L+DEYS +  + + ++P P    E+   +
Sbjct:   218 YVEECDYLQGFQILCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNI 277

Query:   156 -RNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
              R +NTA     L+  S +  PLS+      + E    FPY+ Y+
Sbjct:   278 YRLLNTAFGLVHLTAHSSLVCPLSLGGSLGLRPEPPVSFPYLHYD 322

GO:0043234 "protein complex" evidence=IEA

GO:0051258 "protein polymerization" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005741 "mitochondrial outer membrane" evidence=IDA

GO:0048311 "mitochondrion distribution" evidence=IMP

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|Q5RF82 MSTO1 "Protein misato homolog 1" [Pongo pygmaeus (taxid:9600)]

 Score = 270 (100.1 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 59/165 (35%), Positives = 91/165 (55%)

Query:    38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
             E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  V K     E+  D++  
Sbjct:   158 EASIRVWSDFLRVHLHPRSICMIQKYNHDGEAGRLEAFGQGESVLKEPKYQEELEDRLHF 217

Query:    98 FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQTL-ESNFKL 155
             +VEECD LQGFQIL D   GF G+ A + + L+DEYS +  + + ++P P    E+   +
Sbjct:   218 YVEECDYLQGFQILCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYHRGEAQRNI 277

Query:   156 -RNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
              R +NTA     L+  S +  PLS+      + E    FPY+ Y+
Sbjct:   278 YRLLNTAFGLVHLTAHSSLVCPLSLGGSLGLRPEPPVNFPYLHYD 322

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0007005 "mitochondrion organization" evidence=ISS

GO:0048311 "mitochondrion distribution" evidence=ISS

UNIPROTKB|F1RLM2 MSTO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 269 (99.8 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 58/165 (35%), Positives = 90/165 (54%)

Query:    38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
             E S++ WSDF+R   HP+S  +IQ+Y H+  +   + + QG  + K     E   D++  
Sbjct:   158 EGSIRVWSDFLRVHLHPRSICMIQKYNHDGETGRLEAFGQGESILKEPKYLEALEDRLHF 217

Query:    98 FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQTLESNFK-- 154
             +VEECD LQGFQ+L D   GF G+ A + + L+DEYS +  + + ++P P  L    K  
Sbjct:   218 YVEECDYLQGFQVLCDLHDGFSGVGAKAAELLQDEYSGRGIITWGLLPGPYRLGEPQKNI 277

Query:   155 LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
              R +NTA     LS  S +  PLS+      + E    FP+++Y+
Sbjct:   278 YRLLNTAFGLVHLSAHSSLVCPLSLGGSLGLRPEPPVSFPHLQYD 322

GO:0005525 "GTP binding" evidence=IEA

GO:0051258 "protein polymerization" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

UNIPROTKB|J9P0H7 MSTO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 267 (99.0 bits), Expect = 1.7e-22, P = 1.7e-22
 Identities = 59/190 (31%), Positives = 97/190 (51%)

Query:    13 IQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPF 72
             ++   +   + PF        +   E S+K WSDF+    HP+S  +IQ+Y H+  +   
Sbjct:   134 VKSIPNVKGAPPFTTATAPKPHVPTEGSIKVWSDFLSVHLHPRSICMIQKYNHDGEAGRL 193

Query:    73 DCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDE 132
             + + QG  + K     E+  D++  ++EECD LQGFQIL D   GF G+ A + + L+DE
Sbjct:   194 EAFGQGESILKEPRYLEELEDRLHFYLEECDYLQGFQILCDLHNGFSGVGAKATELLQDE 253

Query:   133 YSTKSCLVFPVIP-PQTLESNFK--LRNVNTALFFASLSELSDVFSPLSISSDCWNQTET 189
             YS +  + + ++P P +L    K   R +NTA     +S  S +  PLS+      + E 
Sbjct:   254 YSGRGIITWGLLPGPYSLGEPQKNIYRLLNTAFGLVHMSAHSSLVCPLSLGGSLGLRPEP 313

Query:   190 YRKFPYMEYN 199
                FP++ Y+
Sbjct:   314 PVTFPHLRYD 323

GO:0005525 "GTP binding" evidence=IEA

GO:0051258 "protein polymerization" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

UNIPROTKB|A5D9D4 MSTO1 "Protein misato homolog 1" [Bos taurus (taxid:9913)]

 Score = 268 (99.4 bits), Expect = 1.8e-22, P = 1.8e-22
 Identities = 59/165 (35%), Positives = 89/165 (53%)

Query:    38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRS 97
             E S++ WSDF+R   HP+S  +I +Y H+  +   + + QG  + K     E+  D++  
Sbjct:   158 EGSIRVWSDFLRVHLHPRSICMIHKYNHDGEAGRLEAFGQGESILKEPKYLEELEDRLHF 217

Query:    98 FVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIP-PQTLESNFK-- 154
             +VEECD LQGFQIL D   GF GL A + + L+DEYS +  + + ++P P  L    K  
Sbjct:   218 YVEECDYLQGFQILCDLHDGFSGLGAKAAELLQDEYSGRGIITWGLLPGPYRLGELQKNI 277

Query:   155 LRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
              R +NTA     LS  S +  PLS+      + E    FP ++Y+
Sbjct:   278 YRLLNTAFGLVHLSAHSSLVCPLSLGGSLGLRPEPPVSFPLLQYD 322

GO:0048311 "mitochondrion distribution" evidence=ISS

GO:0007005 "mitochondrion organization" evidence=ISS

GO:0005741 "mitochondrial outer membrane" evidence=ISS

GO:0051258 "protein polymerization" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	235
cd06060	493	cd06060, misato, Human Misato shows similarity wit	8e-56
cd00286	328	cd00286, Tubulin_FtsZ, Tubulin/FtsZ: Family includ	6e-13
cd06059	382	cd06059, Tubulin, The tubulin superfamily includes	4e-09
COG5023	443	COG5023, COG5023, Tubulin [Cytoskeleton]	3e-08
cd02186	434	cd02186, alpha_tubulin, The tubulin superfamily in	4e-07
cd02187	425	cd02187, beta_tubulin, The tubulin superfamily inc	5e-07
PTZ00335	448	PTZ00335, PTZ00335, tubulin alpha chain; Provision	1e-06
PLN00220	447	PLN00220, PLN00220, tubulin beta chain; Provisiona	3e-06
PTZ00010	445	PTZ00010, PTZ00010, tubulin beta chain; Provisiona	9e-06
cd02190	379	cd02190, epsilon_tubulin, The tubulin superfamily	9e-06
pfam00091	210	pfam00091, Tubulin, Tubulin/FtsZ family, GTPase do	2e-05
PLN00221	450	PLN00221, PLN00221, tubulin alpha chain; Provision	1e-04
PTZ00387	465	PTZ00387, PTZ00387, epsilon tubulin; Provisional	2e-04
cd02189	446	cd02189, delta_tubulin, The tubulin superfamily in	5e-04

>gnl|CDD|100024 cd06060, misato, Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria

 Score =  184 bits (470), Expect = 8e-56
 Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 7/172 (4%)

Query: 33  KNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWT 92
           K Y LE SV  WSD++  R HP+S N+I +Y H+ +SQPF+ + QG  +W+ E   E++ 
Sbjct: 79  KVYNLEASVNVWSDYLYARLHPRSINVINQYNHDGTSQPFEVFGQGESLWQDESFQEEFE 138

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTLES- 151
           D++R +VEECD LQGFQ+L D   GF G+ A  L+HL+DEY   S L+FP +PP      
Sbjct: 139 DRLRFYVEECDYLQGFQVLCDLHDGFSGVGAKCLEHLQDEYGKAS-LLFPGLPPVIPPDA 197

Query: 152 ----NFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYN 199
               N   R +NTAL  A LSE S +F PLS+S   W +    R FPY+ Y+
Sbjct: 198 SSDKNSI-RVLNTALGLAQLSEHSSLFVPLSLSGTLWRKPGPPRTFPYLNYD 248

It has a role in mitochondrial fusion and in mitochondrial distribution and morphology. Mutations in its Drosophila homolog (misato) lead to irregular chromosome segregation during mitosis. Deletion of the budding yeast homolog DML1 is lethal and unregulate expression of DML1 leads to mitochondrial dispersion and abnormalities in cell morphology. The Misato/DML1 protein family is conserved from yeast to human, but its exact function is still unknown. Length = 493

>gnl|CDD|100014 cd00286, Tubulin_FtsZ, Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation

 Score = 66.7 bits (163), Expect = 6e-13
 Identities = 42/158 (26%), Positives = 58/158 (36%), Gaps = 23/158 (14%)

Query: 37  LEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKS------ELMTED 90
            E  V   +     R     F + Q   H   +         G  W        E   E+
Sbjct: 27  TEPGVIDETLSGPYRLL---FCIGQLITHGGGA---------GNNWAFGHETAGEEYQEE 74

Query: 91  WTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIPPQTL 149
             D +R   EECD LQGF I     GG G GL     + LKDEY  +  + F ++P    
Sbjct: 75  ILDIIRKEAEECDSLQGFFITHSLGGGTGSGLGPVLAERLKDEYPKRLKITFSILPGPD- 133

Query: 150 ESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQT 187
           E    +R  N+ L   +L+E SD      I ++     
Sbjct: 134 EGV-IVRPYNSILTLHTLTEHSDCLVV--IDNEALFDI 168

Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts. Length = 328

>gnl|CDD|100023 cd06059, Tubulin, The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIPPQTLES 151
           D++R  VE+CD LQGFQI     GG G GL +  L+ L DEY       F + P     S
Sbjct: 77  DRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDEYPKILINTFSIFPSPQGSS 136

Query: 152 NFKLRNVNTALFFASLSELSDV 173
           N  +   N+ L    L E SD 
Sbjct: 137 NV-VEPYNSILSLNHLLENSDS 157

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-terminal nucleotide-binding region, an intermediate taxol-binding region and the carboxy-terminal region which probably constitutes the binding surface for motor proteins. Also included in this group is the mitochondrial Misato/DML1 protein family, involved in mitochondrial fusion and in mitochondrial distribution and morphology. Length = 382

>gnl|CDD|227356 COG5023, COG5023, Tubulin [Cytoskeleton]

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 87  MTEDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP 145
           + +D  D +R   + CD LQGF +L    GG G GL +  L+ L++EY  K  L F V P
Sbjct: 112 IIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFP 171

Query: 146 -PQTLESNFKLRNVNTALFFASLSELSD 172
            P+   S+  +   N+ L    L E SD
Sbjct: 172 APKV--SDVVVEPYNSVLTLHRLLENSD 197

Length = 443

>gnl|CDD|100015 cd02186, alpha_tubulin, The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

 Score = 49.6 bits (119), Expect = 4e-07
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP-PQTLE 150
           D++R   + C  LQGF I     GG G G  +  L+ L  +Y  KS L F V P PQ   
Sbjct: 119 DRIRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSVDYGKKSKLEFTVYPSPQVST 178

Query: 151 SNFKLRNVNTALFFASLSELSDV 173
           +  +    N+ L   SL E SD 
Sbjct: 179 AVVE--PYNSVLTTHSLLEHSDC 199

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-terminal nucleotide-binding region, an intermediate taxol-binding region and the carboxy-terminal region which probably constitutes the binding surface for motor proteins. Length = 434

>gnl|CDD|100016 cd02187, beta_tubulin, The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP 145
           D VR   E CDCLQGFQ+     GG G G+    +  +++EY  +    F V P
Sbjct: 117 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMATFSVFP 170

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-terminal nucleotide-binding region, an intermediate taxol-binding region and the carboxy-terminal region which probably constitutes the binding surface for motor proteins. Length = 425

>gnl|CDD|185562 PTZ00335, PTZ00335, tubulin alpha chain; Provisional

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP-PQTLE 150
           D++R   + C  LQGF +     GG G GL +  L+ L  +Y  KS L F + P PQ   
Sbjct: 120 DRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179

Query: 151 SNFKLRNVNTALFFASLSELSDV 173
           +  +    N+ L   SL E +DV
Sbjct: 180 AVVE--PYNSVLSTHSLLEHTDV 200

Length = 448

>gnl|CDD|215107 PLN00220, PLN00220, tubulin beta chain; Provisional

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 75  YLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEY 133
           Y +G E+  S L      D VR   E CDCLQGFQ+     GG G G+    +  +++EY
Sbjct: 106 YTEGAELIDSVL------DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159

Query: 134 STKSCLVFPVIP 145
             +  L F V P
Sbjct: 160 PDRMMLTFSVFP 171

Length = 447

>gnl|CDD|240228 PTZ00010, PTZ00010, tubulin beta chain; Provisional

 Score = 45.5 bits (108), Expect = 9e-06
 Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 75  YLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEY 133
           Y +G E+  S L      D VR   E CDCLQGFQI     GG G G+    +  L++EY
Sbjct: 106 YTEGAELIDSVL------DVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLREEY 159

Query: 134 STKSCLVFPVIP 145
             +  + F V P
Sbjct: 160 PDRIMMTFSVFP 171

Length = 445

>gnl|CDD|100019 cd02190, epsilon_tubulin, The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 92  TDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP 145
            +K+R   E+CD LQ F IL    GG G GL    L+ L DE+      V  V P
Sbjct: 86  LEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLADEFPEVYRFVTSVYP 140

The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis. Length = 379

>gnl|CDD|215710 pfam00091, Tubulin, Tubulin/FtsZ family, GTPase domain

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIPPQTLES 151
           +++R  +E+CD L GF I +   GG G G      + LK+ Y   +  V  V  P T E 
Sbjct: 107 EEIRKELEKCDGLDGFFITAGLGGGTGSGAAPVIAEILKELY--GALTVAVVTFPFTSEG 164

Query: 152 NFKLRNVNTALFFASLSELSDV 173
              +R  N  L    L E SD 
Sbjct: 165 --VVRPYNAILGLKELIEHSDS 184

This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. Length = 210

>gnl|CDD|177802 PLN00221, PLN00221, tubulin alpha chain; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 93  DKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP-PQTLE 150
           D++R   + C  LQGF + +   GG G GL +  L+ L  +Y  KS L F V P PQ   
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-- 177

Query: 151 SNFKLRNVNTALFFASLSELSDV 173
           S   +   N+ L   SL E +DV
Sbjct: 178 STAVVEPYNSVLSTHSLLEHTDV 200

Length = 450

>gnl|CDD|240395 PTZ00387, PTZ00387, epsilon tubulin; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 9/94 (9%)

Query: 89  EDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYS---TKSCLVFPVI 144
           +  ++ VR  VE+CD LQ F ++    GG G GL    L  L+DE+        +VFP  
Sbjct: 115 DSISESVRRQVEQCDSLQSFFLMHSLGGGTGSGLGTRILGMLEDEFPHVFRFCPVVFPSA 174

Query: 145 PPQTLESNFKLRNVNTALFFASLSELSDVFSPLS 178
               + S +     N+      L E +D   PL 
Sbjct: 175 VDDVITSPY-----NSFFALRELIEHADCVLPLD 203

Length = 465

>gnl|CDD|100018 cd02189, delta_tubulin, The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 89  EDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIPPQ 147
           ED  D +R  VE+CD  +GF +L    GG G GL +   + L+DEY     L   V P  
Sbjct: 110 EDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRDEYPESLLLNIVVWPYT 169

Query: 148 TLESNFKLRNVNTALFFASLSELSD 172
           T E    ++N NT L  A L E SD
Sbjct: 170 TGEV--IVQNYNTVLTLAHLYESSD 192

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies. Length = 446

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	235
COG5023	443	Tubulin [Cytoskeleton]	100.0
KOG1374|consensus	448		100.0
cd06060	493	misato Human Misato shows similarity with Tubulin/	100.0
PLN00221	450	tubulin alpha chain; Provisional	100.0
PTZ00335	448	tubulin alpha chain; Provisional	100.0
cd02188	431	gamma_tubulin Gamma-tubulin is a ubiquitous phylog	100.0
cd02186	434	alpha_tubulin The tubulin superfamily includes fiv	100.0
PLN00222	454	tubulin gamma chain; Provisional	100.0
PF14881	180	Tubulin_3: Tubulin domain	100.0
PLN00220	447	tubulin beta chain; Provisional	100.0
PTZ00010	445	tubulin beta chain; Provisional	100.0
cd02187	425	beta_tubulin The tubulin superfamily includes five	100.0
cd02189	446	delta_tubulin The tubulin superfamily includes fiv	100.0
PTZ00387	465	epsilon tubulin; Provisional	100.0
KOG1376|consensus	407		99.97
KOG2530|consensus	483		99.97
cd02190	379	epsilon_tubulin The tubulin superfamily includes f	99.97
cd06059	382	Tubulin The tubulin superfamily includes five dist	99.94
PF00091	216	Tubulin: Tubulin/FtsZ family, GTPase domain; Inter	99.94
cd00286	328	Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin	99.93
smart00864	192	Tubulin Tubulin/FtsZ family, GTPase domain. This d	99.69
KOG1375|consensus	369		99.63
cd02202	349	FtsZ_type2 FtsZ is a GTPase that is similar to the	99.47
cd02191	303	FtsZ FtsZ is a GTPase that is similar to the eukar	99.3
TIGR00065	349	ftsZ cell division protein FtsZ. This family consi	99.15
cd02201	304	FtsZ_type1 FtsZ is a GTPase that is similar to the	99.1
PRK13018	378	cell division protein FtsZ; Provisional	98.76
PRK09330	384	cell division protein FtsZ; Validated	98.68
COG0206	338	FtsZ Cell division GTPase [Cell division and chrom	94.07

>COG5023 Tubulin [Cytoskeleton]

Probab=100.00  E-value=1.8e-47  Score=341.22  Aligned_cols=200  Identities=21%  Similarity=0.285  Sum_probs=177.4

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccC------------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN------------   67 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~------------   67 (235)
                      ||+|=+|||+||.||||.|+|++ +...+.+.|+..+||++...++|+||++++      |++++.++            
T Consensus        14 nQiG~~fWe~~c~EHGI~~~G~~-~~~~~~~~er~~vfF~e~~~~k~vPRaI~vDLEP~vid~v~~g~y~~lf~Pen~i~   92 (443)
T COG5023          14 NQIGNAFWETLCLEHGIGPDGTL-LDSSDEGDERFDVFFYEASDGKFVPRAILVDLEPGVIDQVRNGPYGSLFHPENIIF   92 (443)
T ss_pred             hHHHHHHHHHHHHhhCcCCCCCC-CCCcccccccccceeeecCCCccccceEEEecCcchHhhhccCccccccChhheee
Confidence            79999999999999999999996 777777889999999999999999999998      55555432            


Q ss_pred             ------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccce
Q psy7545          68 ------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLV  140 (235)
Q Consensus        68 ------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~  140 (235)
                            ++|+.|+|+.|+++.      |+++|.|||++|.||+||||+++||++||| ||+||.|||+|++|||||.+.+
T Consensus        93 gkegAgNnwA~GhYtvG~e~~------ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~t  166 (443)
T COG5023          93 GKEGAGNNWARGHYTVGKEII------DDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLT  166 (443)
T ss_pred             ccccccccccccccchhHHHH------HHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeE
Confidence                  467888999998775      899999999999999999999999999999 9999999999999999999999


Q ss_pred             eeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhhh
Q psy7545         141 FPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYL  214 (235)
Q Consensus       141 ~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~~  214 (235)
                      |+|+|.++ +++++++|||++|++|.|.|+||+++.++|. ++++-......+++..|+..|++++++=.+.+.
T Consensus       167 fSV~P~p~-~Sd~VVePYNsvLt~h~l~ensD~tf~~DNe-al~di~~~~L~i~~P~y~~lN~LIs~VmSsvTt  238 (443)
T COG5023         167 FSVFPAPK-VSDVVVEPYNSVLTLHRLLENSDCTFVVDNE-ALYDICRRNLRIQNPSYDDLNQLISTVMSSVTT  238 (443)
T ss_pred             EEeccCCc-cCcceecccHHHHHHHHHHhcCCceEEechH-HHHHHHHHhcCCCCCChHHHHHHHHHHHHhhhh
Confidence            99999865 4789999999999999999999999999995 444444445567788999999999998777654

>KOG1374|consensus

Probab=100.00  E-value=3.8e-41  Score=301.04  Aligned_cols=206  Identities=18%  Similarity=0.235  Sum_probs=179.1

Q ss_pred             cCcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccCC----------
Q psy7545           5 YNPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENS----------   68 (235)
Q Consensus         5 ~~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~----------   68 (235)
                      =||+||+||+++|.||||.|+|++ .+..+++.+...+||++..+.+|.||+|++      |+++...+.          
T Consensus        14 GNQiG~efwk~L~~Ehgis~~g~l-~d~~~~~~drKdvFFyqadd~~yipRAvLvDlEPrVIn~~~~~~~s~l~n~eni~   92 (448)
T KOG1374|consen   14 GNQIGFEFWKQLCLEHGISPDGIL-EDFATEGADRKDVFFYQADDNHYIPRAVLVDLEPRVINQILSSPYSGLYNPENIF   92 (448)
T ss_pred             ccHHHHHHHHHHHHhcCCCcCCcc-cchhhhCccccccceeeccCCccccceeeeccchHHHhccccchhhcccCccceE
Confidence            389999999999999999999996 778888889999999999999999999998      444433321          


Q ss_pred             -----CCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceee
Q psy7545          69 -----SQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFP  142 (235)
Q Consensus        69 -----~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~  142 (235)
                           ..+-++|+.|+.+  ++...|+++|.|+|++|.||+|.||+++||++||| ||+||.++|+|.|+||||.+.+++
T Consensus        93 ~s~~ggGAGNNWA~GY~~--G~~~~e~ImdiIdrEad~~DsleGF~l~hSiAGGTGSGlGS~llErL~drypkkliqtys  170 (448)
T KOG1374|consen   93 LSDHGGGAGNNWASGYSQ--GERVQEDIMDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSFLLERLNDRYPKKLVQTYS  170 (448)
T ss_pred             EecCCCCccccccccccc--chhhHHHHHHHHHHhhcCCCcccceeEEEeecCCCCcchHHHHHHHHHHhchhhhheeee
Confidence                 1244678888766  56678999999999999999999999999999999 999999999999999999999999


Q ss_pred             eeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhhh
Q psy7545         143 VIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYL  214 (235)
Q Consensus       143 v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~~  214 (235)
                      |+|....+++++++|||++|+|+.|.+.+|+++.++|. ++-+-.......++..+++.|+++++|-.+.+.
T Consensus       171 VfPn~d~ssdVVVQpYNsiLtL~rL~~nsD~vVVlDN~-AL~ria~~~l~i~~ptF~~iNqLvstims~st~  241 (448)
T KOG1374|consen  171 VFPNQDESSDVVVQPYNSILTLKRLTENSDCVVVLDNT-ALHRIAADRLHIQNPTFSQINQLVSTIMSASTT  241 (448)
T ss_pred             eccCCCCccceEEecchHHHHHHHHhhCCCeEEEeccH-HHHHHHHHHhcCCCCCHHHHHHHHHHHHhhccc
Confidence            99987656899999999999999999999999999995 444444455567888999999999998766554

>cd06060 misato Human Misato shows similarity with Tubulin/FtsZ family of GTPases and is localized to the the outer membrane of mitochondria

Probab=100.00  E-value=7.2e-39  Score=301.97  Aligned_cols=191  Identities=40%  Similarity=0.728  Sum_probs=172.4

Q ss_pred             cCCCCccceeccCccCccCCccccccccccccCCCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCC
Q psy7545          35 YQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDA  114 (235)
Q Consensus        35 ~~le~~~~~wsd~~~~~~~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~  114 (235)
                      ++++++++|||||++..||||++.+|+++.++.....|+.|+.|.++|++.+..|+++|+||+++|+||+|||||+++|+
T Consensus        81 ~~l~~~v~~WSDy~r~~yhPrS~~~L~~~~~~~~~~~fd~fg~G~~~f~~~~~~d~~~DrIR~~vEeCD~LQGFqi~~sl  160 (493)
T cd06060          81 YNLEASVNVWSDYLYARLHPRSINVINQYNHDGTSQPFEVFGQGESLWQDESFQEEFEDRLRFYVEECDYLQGFQVLCDL  160 (493)
T ss_pred             cccccchhhhhhcceeeeCCCceeeccchhcCCCCCCccccccChhhhcchhhHHHHHHHHHHHHHhCcccccEEEEEec
Confidence            56788999999999999999999999999998888899999999999998889999999999999999999999999999


Q ss_pred             CCCCchhhHhhhHHHHhhcCCcccceeeeeCCCCC---ccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCC
Q psy7545         115 TGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQTL---ESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYR  191 (235)
Q Consensus       115 ~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~~---~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~  191 (235)
                      +||||||+++++|+|+|||||+.++.+++.|....   ..++++++||++|++++|.+++|+++|+.....+|+++..+.
T Consensus       161 ~gG~sG~gs~lLE~L~DEy~k~~i~~~~v~P~~~~~~~~~~~vv~~yNs~LSl~~L~e~sdl~vPl~~~~~~w~~~~~p~  240 (493)
T cd06060         161 HDGFSGVGAKCLEHLQDEYGKASLLFPGLPPVIPPDASSDKNSIRVLNTALGLAQLSEHSSLFVPLSLSGTLWRKPGPPR  240 (493)
T ss_pred             CCcccchHHHHHHHHHHhcCccceeEEEeCCCcccccccchhHHHHHHHHHHHHHHHhcCCEEEEEecccccccCCCCCC
Confidence            99999999999999999999999999999986421   125789999999999999999999999999888999988888


Q ss_pred             CCCCcc------ccchhhHHHhhhhhhhhHhhhhhccccc
Q psy7545         192 KFPYME------YNVRECIMKELNNSAYLECLNRTKESLN  225 (235)
Q Consensus       192 ~~~~~~------y~~~~~~~~~i~~~~~~~~~~~~~~~~~  225 (235)
                      .++++.      |..++.+++-||+.++=.+|++...++.
T Consensus       241 ~~~~l~~d~~~~~htSAllA~aldT~TLp~Rl~~~~~~m~  280 (493)
T cd06060         241 TFPYLNYDAELPYHTSALLATALDTLTLPYRLKSSPSSLS  280 (493)
T ss_pred             CCcccccCCCCchHHHHHHHHHHhhccccceeccCCccHH
Confidence            888765      5566899999999998888887765443

It has a role in mitochondrial fusion and in mitochondrial distribution and morphology. Mutations in its Drosophila homolog (misato) lead to irregular chromosome segregation during mitosis. Deletion of the budding yeast homolog DML1 is lethal and unregulate expression of DML1 leads to mitochondrial dispersion and abnormalities in cell morphology. The Misato/DML1 protein family is conserved from yeast to human, but its exact function is still unknown.

>PLN00221 tubulin alpha chain; Provisional

Probab=100.00  E-value=6.3e-39  Score=300.79  Aligned_cols=204  Identities=20%  Similarity=0.230  Sum_probs=162.8

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCC--cCCCCccceeccCccCccCCccccc------cccccccCCC--------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKN--YQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS--------   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~--~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~--------   69 (235)
                      ||+|.+||+++|.||||+|+|+.. .++.  +..+...+||++...++|+||+|++      |+++..++..        
T Consensus        14 nQIG~~fW~~l~~Eh~i~~~g~~~-~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~~~~~~lf~~~~~   92 (450)
T PLN00221         14 IQVGNACWELYCLEHGIQPDGQMP-SDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQL   92 (450)
T ss_pred             HHHHHHHHHHHHHHhCcCCCCCcc-CCccccccchhhhhheeccCCcccccchhcCCCChhhhhhhccCccccccCccce
Confidence            789999999999999999999762 2222  2345667899999999999999998      3444322110        


Q ss_pred             -----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          70 -----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        70 -----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                           .+-++|+.|+... +.+..|.++|+|||++|+||+||||+++||++||| ||+||+++|+|+|+|||+.+++++|
T Consensus        93 i~~~~gagNnwa~Gy~~~-g~~~~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GGtGSGlgs~~le~l~d~y~~~~~~~~~v  171 (450)
T PLN00221         93 ISGKEDAANNFARGHYTI-GKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV  171 (450)
T ss_pred             eccCCCccccccccccch-hHHHHHHHHHHHHHHHHhccCccceeEeeccCCCccchHHHHHHHHHHHhcccccceeeEe
Confidence                 1223455553221 23456899999999999999999999999999999 9999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      +|+... +++++++||++|++++|.+++|+++|++|. .+.+.......++...|+..|.++|+.=.+.+
T Consensus       172 ~P~~~~-~~~vv~~YN~~Lsl~~l~e~~d~~~~~dN~-al~~~~~~~~~~~~p~~~dlN~lIa~~is~~T  239 (450)
T PLN00221        172 YPSPQV-STAVVEPYNSVLSTHSLLEHTDVAVLLDNE-AIYDICRRSLDIERPTYTNLNRLISQVISSLT  239 (450)
T ss_pred             eCCCcC-CCCchhhhHHHHhHHHHHhhCceeeecchH-HHHHHHHhhcCCCCCCHHHHHHHHhhhccccc
Confidence            998643 568999999999999999999999999995 34444344455677899999999998766555

>PTZ00335 tubulin alpha chain; Provisional

Probab=100.00  E-value=1.2e-37  Score=291.90  Aligned_cols=199  Identities=21%  Similarity=0.250  Sum_probs=160.6

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCC--cCCCCccceeccCccCccCCccccc------cccccccC----------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKN--YQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN----------   67 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~--~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~----------   67 (235)
                      |++|.+||+++|.||||+|+|.+ ...+.  +..+...+||++...++|+||+|++      |+++..++          
T Consensus        14 nqiG~~fW~~~~~Eh~i~~~g~~-~~~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~~~~~~l~~~~~~   92 (448)
T PTZ00335         14 IQVGNACWELFCLEHGIQPDGQM-PSDKNIGVEDDAFNTFFSETGAGKHVPRCVFLDLEPTVIDEVRTGTYRQLFHPEQL   92 (448)
T ss_pred             HHHHHHHHHHHHHHhCcCCCCCc-cCCCcccccchhhcceeEEcCCCccccccccccCCcchhhhcccCccccccCchhe
Confidence            78999999999999999999976 22222  2345667899999999999999998      34443221          


Q ss_pred             --------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCccc
Q psy7545          68 --------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSC  138 (235)
Q Consensus        68 --------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~  138 (235)
                              ++|+.|.|..|.      +..|+++|+|||++|+||++|||+++||++||| ||+|+.++|+|+|+|||+++
T Consensus        93 i~~~~gagnnwa~Gy~~~G~------~~~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GGTGSGlgs~l~e~l~d~yp~~~~  166 (448)
T PTZ00335         93 ISGKEDAANNFARGHYTIGK------EIVDLCLDRIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSK  166 (448)
T ss_pred             eecCCCCCCcccccccchhh------hHhHHHHHHHHHhHHhccCccceeEeeccCCCccchHHHHHHHHHHHhccccce
Confidence                    234444444443      456899999999999999999999999999999 99999999999999999999


Q ss_pred             ceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         139 LVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       139 ~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      ++++|+|+... ++.++++||++|++++|.+++|++++++|. .+.+.......+....|+..|.++++.-...+
T Consensus       167 ~~~~v~P~~~~-~~~~v~~YN~~Lsl~~L~e~~d~~~~~dN~-al~~i~~~~~~~~~~~~~~~N~~Ia~~is~~t  239 (448)
T PTZ00335        167 LGFTIYPSPQV-STAVVEPYNSVLSTHSLLEHTDVAVMLDNE-AIYDICRRNLDIERPTYTNLNRLIAQVISSLT  239 (448)
T ss_pred             eeEEecCCCCC-CCcceeehHHHHhHHHHHhhCCeeeeechH-HHHHHHHHhcCCCCCCHHHHHHHHHhhhcccc
Confidence            99999998642 578999999999999999999999999995 33332222334566789999999998777655

>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily

Probab=100.00  E-value=2e-37  Score=289.23  Aligned_cols=205  Identities=16%  Similarity=0.209  Sum_probs=165.1

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccCCC----------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS----------   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~----------   69 (235)
                      ||+|.+|||++|.||||+|+|.. ..+.+...+...+||++...++|+||+|++      |+++..++..          
T Consensus        13 nqIG~~~We~l~~eh~~~~~g~~-~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~Ep~vi~~i~~~~~~~lf~~~~~~~   91 (431)
T cd02188          13 NQIGSEFWKQLCAEHGISPDGIL-EDFATDGGDRKDVFFYQADDEHYVPRAILIDLEPRVINSIQNSEYRNLYNPENIFL   91 (431)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCc-CCCccccccccceeEEECCCCccCCcceeccCCcchhhhhhcCccccccCccceEe
Confidence            68999999999999999999976 333333446677899999999999999998      4444332211          


Q ss_pred             -----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          70 -----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        70 -----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                           .+-++|+.|+..  +.+..|+++|+|||++|+||++|||+++||++||| ||+|+.|+|+|+|+|||+.+++++|
T Consensus        92 ~~~~~gagnnwa~Gy~~--g~~~~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGTGSG~gs~l~e~L~d~y~~~~~~~~~V  169 (431)
T cd02188          92 SKHGGGAGNNWASGYSQ--GEEVQEEILDIIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDRYPKKLIQTYSV  169 (431)
T ss_pred             eccCCCccccHHHHHHH--HHHHHHHHHHHHHHHHhcCCCcceeEEEecCCCCcchhHHHHHHHHHHhHcCcceeeeEEe
Confidence                 233567777442  45778999999999999999999999999999999 8999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhhh
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYL  214 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~~  214 (235)
                      +|+....+++++++||++|++++|.+++|++++++|. .+.+.......++...|+..|.++|+.-.+.+.
T Consensus       170 ~P~~~~~s~~~v~~YN~~lsl~~l~e~~d~~~~~dN~-al~~i~~~~l~~~~~~~~~~N~~ia~~ls~~t~  239 (431)
T cd02188         170 FPNQDESSDVVVQPYNSILTLKRLILNADCVVVLDNT-ALNRIATDRLHIQNPTFDQINSLVSTVMSASTT  239 (431)
T ss_pred             cCCCccCCCccceecHHHHHHHHHHHhCCeeeecchH-HHHHHHHHhcCCCCCCHHHHHHHHhccCCCccc
Confidence            9975432467899999999999999999999999994 232222233445667899999999887755443

Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.

>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=100.00  E-value=6.5e-37  Score=286.32  Aligned_cols=204  Identities=20%  Similarity=0.223  Sum_probs=158.6

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCC--cCCCCccceeccCccCccCCccccc------cccccccC-------CC-
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKN--YQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN-------SS-   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~--~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~-------~~-   69 (235)
                      ||+|.+|||++|.||||+|+|+. ..+++  ...+...+||++...++|+||+|++      |+++..+.       .+ 
T Consensus        13 nqiG~~~w~~l~~Eh~~~~~g~~-~~~~~~~~~~~~~~~ff~e~~~~~~~pRav~iD~e~~~i~~i~~~~~~~l~~~~~~   91 (434)
T cd02186          13 IQIGNACWELYCLEHGIQPDGQM-PSDKTIGGGDDAFNTFFSETGSGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQL   91 (434)
T ss_pred             hHHHHHHHHHHHHHhCcCCCCCc-cCCccccccccccceEEEECCCCcCcccccccCCcHHHHHhhccCccccccCccce
Confidence            78999999999999999999976 33322  3456778999999999999999998      33332211       00 


Q ss_pred             -----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          70 -----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        70 -----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                           .+-++|+.|.... +.+..|+++|+|||++|+||++|||+++||++||| ||+|+.++|+|+|+|||+++.+++|
T Consensus        92 ~~~~~g~gnnwa~Gy~~~-G~~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGTGSGlgs~l~e~l~d~y~~~~~~~~~v  170 (434)
T cd02186          92 ISGKEDAANNFARGHYTI-GKEIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSVDYGKKSKLEFTV  170 (434)
T ss_pred             eecCCCCCcccccccchh-HHHHHHHHHHHHHHHHhcCCCcceeEEEeccCCCcchhHHHHHHHHHHHhcCccceeeEEE
Confidence                 1123444443222 23456899999999999999999999999999999 9999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      +|+... ++.++++||++|++++|.+++|++++++|. .+.+.......++...|+..|.++++.-...+
T Consensus       171 ~P~~~~-~~~~v~~YN~~lsl~~l~e~~d~~~~~dN~-al~~~~~~~~~~~~~~~~~lN~iIa~~l~~~t  238 (434)
T cd02186         171 YPSPQV-STAVVEPYNSVLTTHSLLEHSDCSFMVDNE-AIYDICRRNLDIERPTYTNLNRLIAQVVSSIT  238 (434)
T ss_pred             eCCCCC-CCCeeeehHHHHhHHHHHhhCCeeeeeccH-HHHHHHHhhcCCCCCCHHHHHHHHHHHhhccc
Confidence            998643 467999999999999999999999999994 22222222233456688888888887766554

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino

>PLN00222 tubulin gamma chain; Provisional

Probab=100.00  E-value=3.7e-37  Score=289.04  Aligned_cols=204  Identities=17%  Similarity=0.221  Sum_probs=167.0

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccCCC----------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS----------   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~----------   69 (235)
                      ||+|.+|||++|+||||+++|.+ ..+++.+.+...+||++...++|+||+|++      |+++..++..          
T Consensus        15 nqiG~~~w~~l~~Eh~i~~~g~~-~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~vi~~i~~~~~~~lf~~~~~~~   93 (454)
T PLN00222         15 NQIGMEFWKQLCLEHGISKDGIL-EDFATQGGDRKDVFFYQADDEHYIPRALLIDLEPRVINGIQNSEYRNLYNHENIFV   93 (454)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCc-cCccccccccccceeEEcCCCcccceeeecCCCcchhhhhccCccccccCccceee
Confidence            68999999999999999999986 444444456778899999999999999998      4444332210          


Q ss_pred             -----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          70 -----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        70 -----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                           .+-++|+.|+.  .+.+..|.++|+|||++|.||++|||+++||++||| ||+|+.++|+|+|+|||+.+++++|
T Consensus        94 ~~~~~gagnn~a~Gy~--~g~~~~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGTGSGlgs~lle~L~d~y~~~~~~~~~v  171 (454)
T PLN00222         94 SDHGGGAGNNWASGYH--QGEQVEEDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSV  171 (454)
T ss_pred             cccCCCcccchHHhHH--HHHHHHHHHHHHHHHHHHhCCCccceEEeecCCCCccchHHHHHHHHHHhhcCCcceeeEEe
Confidence                 14456777743  245778999999999999999999999999999999 8999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      +|+....+++++++||++|++++|.+++|++++++|. .+.+.......++...|+..|.++|+.-.+.+
T Consensus       172 ~P~~~~~~~~vv~~YN~~lsl~~l~~~~D~~~~~dN~-al~~ic~~~l~i~~p~~~dlN~lIA~~ls~~T  240 (454)
T PLN00222        172 FPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNT-ALNRIAVDRLHLENPTFAQTNSLVSTVMSAST  240 (454)
T ss_pred             cCCCcccCCceeeecHHHHhHHHHHhcCCeeeEecHH-HHHHHHHHhcCCCCCCHHHHHHHhccccCCcc
Confidence            9975323568899999999999999999999999994 33333333445677899999999998876655

>PF14881 Tubulin_3: Tubulin domain

Probab=100.00  E-value=8e-37  Score=254.87  Aligned_cols=168  Identities=38%  Similarity=0.676  Sum_probs=143.1

Q ss_pred             CCccceeccCccCccCCccccccccccccCCCCCCCCCcccccccccccchhhHHHH-HHhhhhhcccccCeeEeeCCCC
Q psy7545          38 EESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDK-VRSFVEECDCLQGFQILSDATG  116 (235)
Q Consensus        38 e~~~~~wsd~~~~~~~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~-IRk~~E~CD~lqGF~i~~s~~G  116 (235)
                      .+.++|||||++.+||||+++.|+++.++....+|+.|+.|.++|++.+..++++|+ ||+++||||.|||||++.++++
T Consensus         6 ~~~vryWSDy~r~~yhPrSl~~l~~~~~~~~~~~Fd~f~~G~~~f~~~~~~~d~~D~~lR~f~EECD~lQGfQ~~~d~d~   85 (180)
T PF14881_consen    6 PSNVRYWSDYNRVHYHPRSLNQLNDYEHNSPNMPFDTFGVGQELFKSLDYEEDFFDRDLRFFLEECDSLQGFQVLTDVDD   85 (180)
T ss_pred             CCCCEECCCCCcceeCCCceEEcCccccCCCCCCcccccchHHHHhhhhhhhHHHHHHHHHHHHHcccccceEEEecCCC
Confidence            467999999999999999999999998877788999999999999987777777765 9999999999999999999999


Q ss_pred             CCchhhHhhhHHHHhhcCCccc-ceeeeeCCCCCcc----chhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCC
Q psy7545         117 GFGGLCASSLQHLKDEYSTKSC-LVFPVIPPQTLES----NFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYR  191 (235)
Q Consensus       117 GtsG~~s~lle~L~dey~k~~~-~~~~v~p~~~~~~----~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~  191 (235)
                      |||||++.+||+|+|||||+.+ +.+++.++.....    ....+.+|.++++.+|.++|++++||....          
T Consensus        86 gwgGfas~~Le~L~DEy~k~~i~~~~~~~~~~~~~~~~~~~~~~~~~N~a~s~~~L~~~ssl~vPl~~~~----------  155 (180)
T PF14881_consen   86 GWGGFASSLLEHLRDEYPKKPIIWVWGLRDPSSSSRDAPRKRRLRLLNKALSLSELSEQSSLFVPLSTLS----------  155 (180)
T ss_pred             chHhHHHHHHHHHHHHcCCCceEEeecCCCccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEecCCCC----------
Confidence            9999999999999999999996 6777765432111    234567899999999999999999998421          


Q ss_pred             CCCCccccchhhHHHhhhhhhhhHh
Q psy7545         192 KFPYMEYNVRECIMKELNNSAYLEC  216 (235)
Q Consensus       192 ~~~~~~y~~~~~~~~~i~~~~~~~~  216 (235)
                       =....|..++.+++.||+.|+=.+
T Consensus       156 -d~~s~~htSai~A~aidT~TLp~R  179 (180)
T PF14881_consen  156 -DASSNWHTSAILAAAIDTITLPYR  179 (180)
T ss_pred             -cCCCcHHHHHHHHHHHHhccccCC
Confidence             125688999999999999886443

>PLN00220 tubulin beta chain; Provisional

Probab=100.00  E-value=1.2e-36  Score=285.43  Aligned_cols=202  Identities=20%  Similarity=0.311  Sum_probs=159.3

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccCC-------C---
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENS-------S---   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~-------~---   69 (235)
                      |++|..|||++|+||+|+++|++ ...++...+....||.+...++|+||+|++      |+++..++.       +   
T Consensus        14 nqiG~~~w~~l~~eh~~~~~g~~-~~~~~~~~~~~~~~f~e~~~~~~~pRav~iD~e~~~i~~i~~~~~~~~~~~~~~~~   92 (447)
T PLN00220         14 NQIGAKFWEVVCDEHGIDPTGTY-HGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVF   92 (447)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCc-CCCcccccccccceeccCCCCcccceeEecCCcHHHHHHHhcCccccccCccceEe
Confidence            68999999999999999999886 444454446677899999999999999998      333322111       1   


Q ss_pred             ---CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeC
Q psy7545          70 ---QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIP  145 (235)
Q Consensus        70 ---~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p  145 (235)
                         .+-++|+.|+.. .+.+..|.++|+|||++|+||++|||++++|++||| ||+|+.++++|+|+|||+.+++++|+|
T Consensus        93 ~~~gagnnwa~G~~~-~g~~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGTGSG~gs~l~~~l~~~y~~~~~~~~~v~P  171 (447)
T PLN00220         93 GQSGAGNNWAKGHYT-EGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP  171 (447)
T ss_pred             cccCCCCccCceeec-ccHHHHHHHHHHHHHHHHhCcCcCceEEEEecCCCccccHHHHHHHHHHHhccccceeeeEEEC
Confidence               122344444322 233456899999999999999999999999999999 999999999999999999999999999


Q ss_pred             CCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhh
Q psy7545         146 PQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNS  211 (235)
Q Consensus       146 ~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~  211 (235)
                      ++. .++.++++||++|++++|.+++|++++++|. .+.+.......+....|++.|.++++.=.+
T Consensus       172 ~~~-~~~~~v~~yN~~lsl~~l~~~~d~~i~~dN~-aL~~i~~~~~~i~~~sf~~~N~lIa~~is~  235 (447)
T PLN00220        172 SPK-VSDTVVEPYNATLSVHQLVENADECMVLDNE-ALYDICFRTLKLTTPSFGDLNHLISATMSG  235 (447)
T ss_pred             CCc-CCCCccchhHHHHhHHHHHhcCCceEEeehH-HHHHHHHHhhcCCCCChHHHHhHhhccccc
Confidence            764 3678999999999999999999999999995 233222222345567899999998866554

>PTZ00010 tubulin beta chain; Provisional

Probab=100.00  E-value=2.2e-36  Score=283.48  Aligned_cols=204  Identities=21%  Similarity=0.322  Sum_probs=162.4

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccC-------CC---
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN-------SS---   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~-------~~---   69 (235)
                      ||+|.+|||++|.||||+|+|++ ..+++...+...+||++...++|+||+|++      |+++..++       .+   
T Consensus        14 nqiG~~~we~l~~eh~~~~~g~~-~~~~~~~~~~~~~ff~e~~~~~~~pRav~iD~e~~vi~~i~~~~~~~lf~~~~~~~   92 (445)
T PTZ00010         14 NQIGSKFWEVISDEHGIDPTGTY-QGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIF   92 (445)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCC-CCCCcccccccceeecccCCCceEEeeeeccCChhhhhhhcccchhhhcCccceee
Confidence            68999999999999999999976 333344445667899999999999999998      33332221       11   


Q ss_pred             ---CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeC
Q psy7545          70 ---QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIP  145 (235)
Q Consensus        70 ---~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p  145 (235)
                         .+-++|+.|... .+.+..++++|+|||++|+||++|||+++||++||| ||+|++++|+|+|||||+.+++++|+|
T Consensus        93 ~~~gagNnwa~G~~~-~g~~~~~~i~d~irk~~E~cd~l~gf~i~~Sl~GGTGSGlgs~l~e~L~dey~~~~~~~~~v~P  171 (445)
T PTZ00010         93 GQSGAGNNWAKGHYT-EGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSVFP  171 (445)
T ss_pred             cccCCccccccchhh-hhHHHHHHHHHHHhhhhhhccCccceEEEeccCCCccccHHHHHHHHHHhhCCccceeeeEecC
Confidence               122344444322 133456899999999999999999999999999999 899999999999999999999999999


Q ss_pred             CCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         146 PQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       146 ~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      +... ++.++++||++|++++|.+++|.+++++|. .+.+.......++...|+..|.++|+.=.+.+
T Consensus       172 ~~~~-~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~-al~~i~~~~l~~~~p~~~~lN~lIaq~is~~t  237 (445)
T PTZ00010        172 SPKV-SDTVVEPYNATLSVHQLVENADESMCIDNE-ALYDICFRTLKLTTPTYGDLNHLVSAVMSGVT  237 (445)
T ss_pred             Cccc-CccchhhhHHHHhHHHHHhcCCceeeeccH-HHHHHHHHhccCCCCCHHHHHHHHHhhccccc
Confidence            8643 578999999999999999999999999995 33333334445667899999999998876555

>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=100.00  E-value=4.1e-36  Score=280.35  Aligned_cols=204  Identities=20%  Similarity=0.305  Sum_probs=159.5

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccC-------CC---
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN-------SS---   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~-------~~---   69 (235)
                      ||+|.+|||++|.||||+|+|.+ ...++...+...+||++...++|+||+|++      |+++..++       .+   
T Consensus        13 nqiG~~~w~~l~~eh~~~~~g~~-~~~~~~~~~~~~~fF~e~~~~~~~pRav~iD~e~~~i~~i~~~~~~~l~~~~~~~~   91 (425)
T cd02187          13 NQIGAKFWEVISDEHGLDPTGTY-KGDSDLQLERINVYFNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQLFRPDNFVF   91 (425)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCCc-cCCccccccccceeEEecCCCceeeeeeeccCChhhhhhhhcCcccceecCcceee
Confidence            78999999999999999999875 333443345667899999999999999998      33332221       11   


Q ss_pred             ---CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeC
Q psy7545          70 ---QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIP  145 (235)
Q Consensus        70 ---~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p  145 (235)
                         .+-++|+.|... .+.+..|+++|+||+++|+||++|||+++||++||| ||+|+.++|+|+|||||+.+++++|+|
T Consensus        92 ~~~gagnnwa~G~~~-~G~~~~e~i~d~ir~~~E~cD~l~gf~~~~sl~GGTGSG~gs~l~e~l~d~y~~~~~~~~~V~P  170 (425)
T cd02187          92 GQSGAGNNWAKGHYT-EGAELIDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMATFSVFP  170 (425)
T ss_pred             ccCCCCCccCccchh-hcHHHHHHHHHHHHHhhccCCCcceEEEEeecCCCccccHHHHHHHHHHHhcCCcceEEEEEec
Confidence               112334444322 123456899999999999999999999999999999 899999999999999999999999999


Q ss_pred             CCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         146 PQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       146 ~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      +... ++.++++||++|++++|.+++|++++++|. .+.+.......+....|+..|.++|++=.+.+
T Consensus       171 ~~~~-~~~~v~~YN~~lsl~~l~~~~d~~i~~dN~-al~~i~~~~~~~~~~~~~~~N~~ia~~is~~t  236 (425)
T cd02187         171 SPKV-SDTVVEPYNATLSVHQLVENSDETFCIDNE-ALYDICFRTLKLTNPTYGDLNHLVSAVMSGIT  236 (425)
T ss_pred             CCCc-CcceeeehHHHHHHHHHHhcCCeEEEeecH-HHHHHHHHhcCCCCCCHHHHHHHHhccccccc
Confidence            7642 578999999999999999999999999994 23332223334566789999998888765554

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-

>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=100.00  E-value=8.8e-35  Score=272.80  Aligned_cols=201  Identities=23%  Similarity=0.290  Sum_probs=161.9

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccC---------CC-
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN---------SS-   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~---------~~-   69 (235)
                      ||+|.+||+++|.||+++++|.+.     ...+...+||++....+|+||+|++      |+++..+.         .+ 
T Consensus        12 NQIG~~fw~~l~~Eh~~~~~g~~~-----~~~~~~~~ff~e~~~~~~~pRav~iD~ep~vi~~i~~~~~~~~~~f~~~~~   86 (446)
T cd02189          12 NQLGHELFDTLAKEASSSDDEGYK-----YERDAQERFFSEKSDGQPIARSVLVDMEPKVIESTLSKSSGGTWKYDKKNV   86 (446)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCcc-----ccccccceeecccCCCCcCCceeecCCCchHHHHhhcCCCCcccccCchhe
Confidence            799999999999999999988752     2345667899999999999999998      33333221         11 


Q ss_pred             -----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          70 -----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        70 -----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                           .+-++|+.|+... +.++.|+++|+|||++|+||++|||+++||++||| ||+|+.++|+|+|+||++.+++++|
T Consensus        87 ~~~~~gagnnwa~Gy~~~-g~~~~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGtGSG~gs~l~e~l~d~y~~~~~~~~~v  165 (446)
T cd02189          87 ICQQSGSGNNWAYGYYVH-GPQIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRDEYPESLLLNIVV  165 (446)
T ss_pred             eecCCCCccchhcccccc-chhhHHHHHHHHHHHHHhCCCccceEEEecCCCCcchHHHHHHHHHHHHhcCccceeeeec
Confidence                 1224555554332 34567999999999999999999999999999999 8999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhhhH
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLE  215 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~~~  215 (235)
                      +|+.  .++.++++||++|+++.|.+++|++++++|. .+.+........+...|+..|.++++.-...+.+
T Consensus       166 ~P~~--~~~~~v~~yN~~lsl~~l~e~~d~~~~~dN~-al~~~~~~~~~~~~~~~~~~N~~Ia~~l~~~~~~  234 (446)
T cd02189         166 WPYT--TGEVIVQNYNTVLTLAHLYESSDAIILLEND-DIHRICSKLRNLKNVSLSDINKVIAHQLASLLQP  234 (446)
T ss_pred             cCCC--CCcchhhhhhHHhhHHHHHhhCCeEEEecHH-HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhhH
Confidence            9964  3678999999999999999999999999995 2322222333456679999999999888777654

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.

>PTZ00387 epsilon tubulin; Provisional

Probab=100.00  E-value=1.1e-34  Score=272.91  Aligned_cols=164  Identities=18%  Similarity=0.250  Sum_probs=133.6

Q ss_pred             CcchhHHHHHHHHHhC-CCCCCCcccCCCCcCCCCccceeccCcc-------CccCCccccc------cccccccCC---
Q psy7545           6 NPKSFNLIQEYQHENS-SQPFDCYLQDCKNYQLEESVKYWSDFMR-------TRYHPKSFNL------IQEYQHENS---   68 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehg-i~p~g~~~~~~~~~~le~~~~~wsd~~~-------~~~~PRsl~v------i~~~~~~~~---   68 (235)
                      ||+|.+||+++|.||| |+++|.+        .+....||++...       .+|+||+|++      |+++..++.   
T Consensus        14 nQIG~~fW~~l~~Eh~~i~~~g~~--------~~~~~~fF~~~~~~~~~~~~~~~~pRav~vD~Ep~vi~~i~~~~~~~~   85 (465)
T PTZ00387         14 NQLGHRFWDVALKEHKKINANPQY--------DDARDSFFENVSENVNRPGKENLKARAVLVDMEEGVLNQILKSPLGDL   85 (465)
T ss_pred             HHHHHHHHHHHHHHhCccCCCCcc--------cccccceecccccccccCCCccccCcccccCCCccHHHHhhcCCcccc
Confidence            7999999999999999 8888764        1355677764322       3499999998      344433221   


Q ss_pred             ----C------CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcc
Q psy7545          69 ----S------QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKS  137 (235)
Q Consensus        69 ----~------~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~  137 (235)
                          +      .+-++|+.|+... +.+..|+++|+||+++|+||+||||++++|++||| ||+|+.++|.|+|+|||+.
T Consensus        86 f~~~~~i~~~~GaGNnwa~G~~~~-g~~~~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGTGSGlgs~lle~l~d~y~~~~  164 (465)
T PTZ00387         86 FDENFFVSDVSGAGNNWAVGHMEY-GDKYIDSISESVRRQVEQCDSLQSFFLMHSLGGGTGSGLGTRILGMLEDEFPHVF  164 (465)
T ss_pred             cCcccccccCCCCCCCcCCCcccc-cHHHHHHHHHHHHHHHHhccCcceEEEEeecCCCcchhHHHHHHHHHHHhcccCc
Confidence                1      1234566665443 24567999999999999999999999999999999 8999999999999999999


Q ss_pred             cceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545         138 CLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS  180 (235)
Q Consensus       138 ~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~  180 (235)
                      +++++|+|+.  .++.+++|||++|++++|.+++|+++|++|.
T Consensus       165 ~~~~~V~P~~--~~~~vv~pYN~~lsl~~l~e~~d~~i~~dN~  205 (465)
T PTZ00387        165 RFCPVVFPSA--VDDVITSPYNSFFALRELIEHADCVLPLDND  205 (465)
T ss_pred             eeeeEecCCC--CCcceeccchhHHHHHHHHhhCCeEEEeehH
Confidence            9999999974  3578899999999999999999999999993

>KOG1376|consensus

Probab=99.97  E-value=1.5e-32  Score=245.05  Aligned_cols=196  Identities=22%  Similarity=0.275  Sum_probs=163.0

Q ss_pred             cchhHHHHHHHHHhCCCCCCCcccCCCCc--CCCCccceeccCccCccCCccccc-----cccccccC------------
Q psy7545           7 PKSFNLIQEYQHENSSQPFDCYLQDCKNY--QLEESVKYWSDFMRTRYHPKSFNL-----IQEYQHEN------------   67 (235)
Q Consensus         7 ~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~--~le~~~~~wsd~~~~~~~PRsl~v-----i~~~~~~~------------   67 (235)
                      |+|=++||+||+||||+|+|.+ ..+++.  ..+...+||++...++++||++++     |++++.+.            
T Consensus        15 qi~naCwel~clEhgi~~~g~~-p~~~~~~~~~~~~~tff~~t~~~k~~pr~~fVDlEPtidevrtG~y~~lfHPeqlit   93 (407)
T KOG1376|consen   15 QIGNACWELYCLEHGIQPDGQM-PDDKSVGKGDDSFNTFFSETGAGKHVPRAVFVDLEPTIDEVRTGTYRQLFHPEQLIT   93 (407)
T ss_pred             cccchhHHHHHHHhcCccCCcC-CCCccccccCcccceeecccccccccceeEEEeccCccchhcccchhhccCchhccC
Confidence            6888999999999999999998 444443  345678999999999999999998     67777664            


Q ss_pred             ------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccce
Q psy7545          68 ------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLV  140 (235)
Q Consensus        68 ------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~  140 (235)
                            +|.++++|++|+++.      +..+|+||+.++.|..||||.++|+.+||+ ||++|.++|.|..+|+||.++.
T Consensus        94 GkedAannyArghyt~g~e~i------d~~~~~Ir~~Ad~C~glqgflvFhs~GGgtGsg~~s~lmerls~~~GKkskl~  167 (407)
T KOG1376|consen   94 GKEDAANNYARGHYTIGKEII------DLVLDRIRKLADLCTGLQGFLVFHSFGGGTGSGLGSLLMERLSVDYGKKSKLE  167 (407)
T ss_pred             cchHhhhhHHhhhhhcchhhh------HHHHHHHHHHHHhhccccceEEEEeccCCCcCCccchhhhhhhhhhhhccccc
Confidence                  345778899998875      789999999999999999999999999999 9999999999999999999999


Q ss_pred             eeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeC---CccccccCCCCCCCCCccccchhhHHHhhhhhhhhHhh
Q psy7545         141 FPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSI---SSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECL  217 (235)
Q Consensus       141 ~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~---~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~~~~~  217 (235)
                      |+++|.+.. +..+++|||++|+.+...+++|++++++|   ++.|-++.                   .|++.+|. .|
T Consensus       168 fsiypapqv-St~vvePynsiltth~tle~sD~sf~vdnea~Ydicr~~l-------------------~i~rPtyt-~l  226 (407)
T KOG1376|consen  168 FSIYPAPQV-STAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNL-------------------DIERPTYT-NL  226 (407)
T ss_pred             cccccCccc-cccccCCccccccceeecccCcceeecCchhhcchhhhcc-------------------ccCCcccc-ch
Confidence            999998775 67899999999999999999999999998   33443333                   34444444 55


Q ss_pred             hhhcccccceeee
Q psy7545         218 NRTKESLNPIIGC  230 (235)
Q Consensus       218 ~~~~~~~~~~~~~  230 (235)
                      ||.+.++.+=|+|
T Consensus       227 nr~i~qVvSsita  239 (407)
T KOG1376|consen  227 NRLIAQVVSSITA  239 (407)
T ss_pred             hhhHHhhhccccc
Confidence            5555555555544

>KOG2530|consensus

Probab=99.97  E-value=5.2e-31  Score=240.15  Aligned_cols=198  Identities=30%  Similarity=0.509  Sum_probs=160.6

Q ss_pred             HHHHHHH-HhCCCCCCCcc-cCCCCcCCCCccceeccCccCccCCccccccccccccCCCCCCCCCcccccccccccchh
Q psy7545          12 LIQEYQH-ENSSQPFDCYL-QDCKNYQLEESVKYWSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTE   89 (235)
Q Consensus        12 ~~e~~~~-Ehgi~p~g~~~-~~~~~~~le~~~~~wsd~~~~~~~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e   89 (235)
                      +.|-+.. ||-++..+... ..++++.++..+++|+||++.+||||+++.++...++.  .+|+.|++|+++|++.++.+
T Consensus       111 ~~qs~~~~~~~l~~~~~~~i~~e~~~~~~~sv~~WsDFlr~~yHp~tl~~l~~~~~d~--~a~~~y~iG~d~f~E~s~~e  188 (483)
T KOG2530|consen  111 ELQSLLSAEAELPELNAEEIEYESDYSLLASVPSWSDFLRNHYHPRTLNPLNGLFQDS--GAFDRYSIGYDVFTENSYQE  188 (483)
T ss_pred             HHhhhccccCcccccchhhhccccccccccccchHHHHHHhhcCccccccCCccccCh--HHhhccccchhhhhccchhH
Confidence            3443333 66666655422 33567889999999999999999999999999877655  34999999999999999999


Q ss_pred             hHHHHHHhhhhhcccccCeeEeeCCCCCCchhhHhhhHHHHhhcCCcccceeeeeCCCC--C-ccch---hhhhhhhhhh
Q psy7545          90 DWTDKVRSFVEECDCLQGFQILSDATGGFGGLCASSLQHLKDEYSTKSCLVFPVIPPQT--L-ESNF---KLRNVNTALF  163 (235)
Q Consensus        90 ~i~d~IRk~~E~CD~lqGF~i~~s~~GGtsG~~s~lle~L~dey~k~~~~~~~v~p~~~--~-~~~~---~~~~yN~~Ls  163 (235)
                      ++.|+||.++||||.|||||++.|+++|||||++++||.|+|||+++.+++|.+.|.+.  . +..+   .....|.+++
T Consensus       189 E~~DrLr~~VEECD~lQGFq~l~Did~GfgG~as~~le~l~DEys~~~v~tw~~~~~p~s~~~s~k~ls~~~~~lN~als  268 (483)
T KOG2530|consen  189 EFCDRLRFYVEECDTLQGFQLLSDIDDGFGGFASKLLEELQDEYSKKAVFTWGHNPRPFSQDFSMKRLSNKWLKLNKALS  268 (483)
T ss_pred             HHHHHHHHHHHhcccccceEEEEecCCCchhHHHHHHHHHHHhhcCCceeccccCCCCCCcchhhhhhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988421  1 1122   2337899999


Q ss_pred             HhhhhhcccEEEEeeCCccc---cccCC------CCCCCCCccccchhhHHHhhhhh
Q psy7545         164 FASLSELSDVFSPLSISSDC---WNQTE------TYRKFPYMEYNVRECIMKELNNS  211 (235)
Q Consensus       164 l~~l~e~sd~~~pl~~~~~~---w~~~~------~~~~~~~~~y~~~~~~~~~i~~~  211 (235)
                      +++|++.|++++||+..++.   |...+      ..+++|+-.++.++..+++++.-
T Consensus       269 ~~qLs~~~~l~~PL~~~~~~~~~~~tsA~~a~~~ds~tlptr~~ssS~~~~~d~ls~  325 (483)
T KOG2530|consen  269 LSQLSQECSLYFPLSTASGLGDLWETSAKLARAFDSITLPTRLISSSNLRQRDTLSY  325 (483)
T ss_pred             HHHHhhhcceeeccccccccccHHHHHHHHHhhcccccccceecchhHHHHHHHHHH
Confidence            99999999999999985544   55554      45556667778877777776643

>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=99.97  E-value=6e-31  Score=242.37  Aligned_cols=178  Identities=20%  Similarity=0.241  Sum_probs=127.4

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccce--eccCccCccCCccccccccccccCCCCCCCCCcccccccc
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKY--WSDFMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWK   83 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~--wsd~~~~~~~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~   83 (235)
                      |++|.+||+++|.||. .|-..      -.|+|+.+.-  =..-.+..|.|+.++.-..       .+-++|+.|+..++
T Consensus        13 nqig~~~w~~~~~eh~-~pR~v------~iD~e~~~i~~i~~~~~~~~~~~~~~~~~~~-------gaGnn~a~G~~~~g   78 (379)
T cd02190          13 NQIGCRFWDLALREHL-KARAV------LIDMEEGVVNEILKGPLRDLFDETQLVTDVS-------GAGNNWAVGYHQYG   78 (379)
T ss_pred             HHHHHHHHHHHHHhhc-CCcce------eccCChhHHHHHhcCccccccCcccccccCC-------CCCCCccceeeccc
Confidence            6899999999999991 11110      0122221110  0000122334443332211       12234555544332


Q ss_pred             cccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhh
Q psy7545          84 SELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTAL  162 (235)
Q Consensus        84 ~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~L  162 (235)
                       .+..|+++|+|||++|+||++|||++++|++||| ||+|+.++|.|+|+|||+.+++++|+|+..  .+.++++||++|
T Consensus        79 -~~~~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGTGSG~gs~l~e~l~~~y~~~~~~~~~v~P~~~--~~~~v~~yN~~l  155 (379)
T cd02190          79 -HQYIDSILEKIRKAAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLADEFPEVYRFVTSVYPSAD--DDVITSPYNSVL  155 (379)
T ss_pred             -hhHHHHHHHHHHHHHhhCcCcceEEEEeecCCCcchhHHHHHHHHHHHhcCccceEEEeecCCCC--CCceecccHHHH
Confidence             3556899999999999999999999999999999 899999999999999999999999999863  567899999999


Q ss_pred             hHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         163 FFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       163 sl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      ++++|.+++|++++++|.. +.            .|+..|.++++.=...+
T Consensus       156 sl~~l~~~~d~~i~~~N~~-l~------------~~~~~N~~ia~~i~~~t  193 (379)
T cd02190         156 ALRELIEHADCVLPIENQA-LV------------PFDAMNSIVANLLLNLT  193 (379)
T ss_pred             HHHHHHHhCCeeEEeccHH-HH------------HHHHHHHHHHhhhcCcc
Confidence            9999999999999999962 22            57777777776555444

The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.

>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa

Probab=99.94  E-value=1.7e-27  Score=219.70  Aligned_cols=182  Identities=23%  Similarity=0.248  Sum_probs=140.9

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccC--ccCccCCccccccccccccCCCCCCCCCcccccccc
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDF--MRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWK   83 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~--~~~~~~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~   83 (235)
                      |++|.+||+++          .      -+|+|+.+.-|...  .+..|.|+.++.-++  ...++|++|.+..|.+.  
T Consensus        12 ~qig~~~w~~~----------i------~iD~e~~~i~~i~~~~~~~~~~~~~~~~~~~--g~gnn~a~G~~~~g~~~--   71 (382)
T cd06059          12 NQIGNKFWELL----------I------LVDLDPRVINEILQGQLSKLFDPNQLVNGKE--GSGNNWARGYYTIGPEL--   71 (382)
T ss_pred             HHHHHHHHHHH----------H------cccCCcchhhhhhcccccccCCcccEEeccc--cccccccccccccCHHH--
Confidence            68999999998          1      23556666555543  234577888776543  23456777777777433  


Q ss_pred             cccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhh
Q psy7545          84 SELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTAL  162 (235)
Q Consensus        84 ~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~L  162 (235)
                          .|+++|+||+++|+||++|||++++|++||| ||+++.++|.|+|+|||+.+++++|+|+... .++++++||++|
T Consensus        72 ----~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGTGSG~gs~l~e~l~d~y~~~~i~~~~v~P~~~~-~~~~v~~yN~~l  146 (382)
T cd06059          72 ----IDEILDRIRKQVEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDEYPKILINTFSIFPSPQG-SSNVVEPYNSIL  146 (382)
T ss_pred             ----HHHHHHHHHHHHHhCCCcCceEEEEecCCCcchhHHHHHHHHHHHhcCccceEeEEEeccCcc-CCccccchHHHH
Confidence                5899999999999999999999999999999 8999999999999999999999999998643 347999999999


Q ss_pred             hHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         163 FFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       163 sl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      ++++|.+++|+++|++|. .+.+.......+....|...|.++++.=...+
T Consensus       147 sl~~L~e~sd~~i~~~N~-~l~~~~~~~~~~~~~~~~~~N~iia~~l~~it  196 (382)
T cd06059         147 SLNHLLENSDSVILFDNE-ALYNILTRQLDIDEPSFDDLNNIIAQIISSIT  196 (382)
T ss_pred             hHHHHHhcCCeeEEeehH-HHHHHHHHhcCCCCCChHHHHHHHHHhhcccc
Confidence            999999999999999995 22222222234556678888887777554443

The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi

>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins

Probab=99.94  E-value=1.8e-27  Score=203.75  Aligned_cols=166  Identities=22%  Similarity=0.346  Sum_probs=138.7

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccC------------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN------------   67 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~------------   67 (235)
                      |++|.+||++++.||+|+++     .......+....||++-....|+||++++      ++++..++            
T Consensus        12 ~qIg~~~~~~l~~e~~~~~~-----~~~~~~~~~~~~~f~~~~~~~~~~r~i~iDtd~~~l~~i~~~~~~~l~~~~~~~~   86 (216)
T PF00091_consen   12 NQIGDAFWELLCREHGINPD-----SKSQYNRENINSFFSESSSGKYVPRAIAIDTDPKVLDEIRASPKRSLFDPNNLIS   86 (216)
T ss_dssp             HHHHHHHHHHHHHHCTBTTT-----SSSSTTSSTGCCTEEESTTTBESEEEEEEESSHHHHHHHHTSEETTESCGGGEEE
T ss_pred             HHHHHHHHHHHHHhhccccc-----cccccccccccceeeeccccccccccccccccccccccccccccccccccccccc
Confidence            57899999999999999998     23445567788999999999999999998      33322111            


Q ss_pred             -CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeC
Q psy7545          68 -SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIP  145 (235)
Q Consensus        68 -~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p  145 (235)
                       ...+-++|+.|+... +.+..+.++|+||+++|+||.++||+++++++||| ||+++.+++.|+++||++++++++|+|
T Consensus        87 ~~~g~g~n~~~G~~~~-~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~ilP  165 (216)
T PF00091_consen   87 GQEGSGNNWAVGYYTF-GEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSILP  165 (216)
T ss_dssp             TSSTSTTSHHHHHHHH-HHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE-
T ss_pred             cccccccccccccccc-ccccccccccccchhhccccccccceecccccceeccccccccchhhhccccccceeeccccc
Confidence             113445677776543 23456899999999999999999999999999999 999999999999999999999999999


Q ss_pred             CCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545         146 PQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS  180 (235)
Q Consensus       146 ~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~  180 (235)
                      ..   .+.++++||++++++.|.+++|.+++++|.
T Consensus       166 ~~---~e~~~~~~Na~~~l~~l~~~~d~~i~~dN~  197 (216)
T PF00091_consen  166 FS---SEGVVEPYNALLSLSELQEYADSVILFDND  197 (216)
T ss_dssp             CG---GGSHHHHHHHHHHHHHHHHTSSEEEEEEHH
T ss_pred             cc---cccccccceehhHHHHHHHhCCEEEEEcHH
Confidence            73   378899999999999999999999999994

These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....

>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation

Probab=99.93  E-value=1e-25  Score=203.78  Aligned_cols=179  Identities=21%  Similarity=0.208  Sum_probs=131.2

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCcc--CccCCccccccccccccCCCCCCCCCcccccccc
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMR--TRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWK   83 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~--~~~~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~   83 (235)
                      |++|.+||+++                =-+++|..+..|.+...  .+|.|..++.-.       ..+-++|+.|+....
T Consensus        12 ~~i~~~~~~~~----------------v~idtd~~~l~~~~~~~~~~~~~~~~~~~~~-------~gag~n~~~G~~~~~   68 (328)
T cd00286          12 NQIGAKFWEQL----------------VLVDTEPGVIDETLSGPYRLLFCIGQLITHG-------GGAGNNWAFGHETAG   68 (328)
T ss_pred             hHHHHHHHHhh----------------heecCCHHHHHHHhCcccccccCccceeecC-------CCCCCCcceeecccc
Confidence            57899999987                12466666666665432  234444432211       123344444443321


Q ss_pred             cccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhh
Q psy7545          84 SELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTAL  162 (235)
Q Consensus        84 ~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~L  162 (235)
                       .+..|+++|+||+++|+||++|||+++++++||| ||+++.++|+|+|+|||+++++++++|+... . +++++||++|
T Consensus        69 -~~~~e~i~~~ir~~~E~cD~~~gf~i~~slgGGTGsG~~~~i~e~l~d~y~~~~~~~~~v~P~~~~-~-~~~~~yNa~l  145 (328)
T cd00286          69 -EEYQEEILDIIRKEAEECDSLQGFFITHSLGGGTGSGLGPVLAERLKDEYPKRLKITFSILPGPDE-G-VIVRPYNSIL  145 (328)
T ss_pred             -HHHHHHHHHHHHHHHHhCCCccceEEEeecCCCccccHHHHHHHHHHHHcCccceeEEEecCCCCC-c-chhhhhHHHH
Confidence             2356899999999999999999999999999999 8999999999999999999999999998642 2 6899999999


Q ss_pred             hHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhh
Q psy7545         163 FFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNS  211 (235)
Q Consensus       163 sl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~  211 (235)
                      +++.|.+++|+++|++|. .+.+.......+....|...|.++++.=..
T Consensus       146 ~l~~L~e~~d~~i~~dN~-~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~  193 (328)
T cd00286         146 TLHTLTEHSDCLVVIDNE-ALFDICPRPLHIDKPTFDHINELLATALSS  193 (328)
T ss_pred             HHHHHHhcCCeEEEecch-hHHHHhHHhcCCCCCCHHHHHHHHHhhccc
Confidence            999999999999999996 232222222335566888888877765433

Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.

>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain

Probab=99.69  E-value=3.1e-17  Score=138.11  Aligned_cols=130  Identities=15%  Similarity=0.087  Sum_probs=99.7

Q ss_pred             CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCC
Q psy7545          68 SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPP  146 (235)
Q Consensus        68 ~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~  146 (235)
                      ++++.|.++.| +.-.+.+..++++|+||+++|+|   ++|+++++++||| ||+++.+++.++ +|++.. ++++++|.
T Consensus        50 n~~~~G~~~~~-~~~~g~~~~~~~~~~ir~~le~~---d~~~i~~slgGGTGsG~~~~i~~~~~-~~~~~~-~~~~v~P~  123 (192)
T smart00864       50 NNWTRGLGAGA-DPEVGREAAEESLDEIREELEGA---DGVFITAGMGGGTGTGAAPVIAEIAK-EYGILT-VAVVTKPF  123 (192)
T ss_pred             ccccccCCCCC-ChHHHHHHHHHHHHHHHHHhcCC---CEEEEeccCCCCccccHHHHHHHHHH-HcCCcE-EEEEEEeE
Confidence            44566666533 22223455689999999999999   8999999999999 899999999999 999887 89999994


Q ss_pred             CCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         147 QTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       147 ~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                         ..+.++++||++++++.|.+++|.+++++|. .+.+.......+ ...|+..|+++++.
T Consensus       124 ---~~e~~~~~~Na~~~l~~l~~~~d~~i~~dN~-~l~~~~~~~~~~-~~~~~~~N~~i~~~  180 (192)
T smart00864      124 ---VFEGVVRPYNAELGLEELREHVDSLIVIDND-ALLDICGRNLPI-RPAFKDANDLLAQA  180 (192)
T ss_pred             ---eecchhHHHHHHHHHHHHHHhCCEEEEEEhH-HHHHHHhccCCc-hHHHHHHHHHHHHH
Confidence               2567899999999999999999999999995 232222222222 34677777766644

This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.

>KOG1375|consensus

Probab=99.63  E-value=1.2e-16  Score=143.62  Aligned_cols=129  Identities=23%  Similarity=0.416  Sum_probs=109.9

Q ss_pred             CCcCCCCccceeccCccCccCCccccc------cccccccCCC---------CCCCCCcccccccccccchhhHHHHHHh
Q psy7545          33 KNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS---------QPFDCYLQGGEVWKSELMTEDWTDKVRS   97 (235)
Q Consensus        33 ~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~---------~~f~~y~~G~~~~~~~~~~e~i~d~IRk   97 (235)
                      .+.++++..+++.+....+|+||++++      ++.+..++..         ...++|+.|.++.      |.       
T Consensus         4 ~~~q~~~i~~~~~~~~~~~~~~ravlvdlepgs~dsv~~~~~g~~frp~~~~sg~ghy~~ga~~~------ds-------   70 (369)
T KOG1375|consen    4 SDLQLERINVYYNEAGGGKYVPRAVLVDLEPGSMDSVRSGPFGQIFRPDNGQSGKGHYTEGAELV------DS-------   70 (369)
T ss_pred             ccceeeeeeeeecccccccccchhheeeccCccccccccCccceeccCcCCccCccceeeeeeeh------hc-------
Confidence            456788899999998899999999998      3344333211         2256788886553      22       


Q ss_pred             hhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEE
Q psy7545          98 FVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSP  176 (235)
Q Consensus        98 ~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~p  176 (235)
                         .||+|||||+.|+++||+ +|.+++++..++++||.+...++++.|++.  ++.+++|||+.|+++.|.+++|.+++
T Consensus        71 ---~~dclqgfql~hs~gggtGsg~gt~l~~k~~ee~~d~i~~~~sv~ps~k--sd~vvepyna~ls~~ql~en~~et~c  145 (369)
T KOG1375|consen   71 ---SCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPK--SDTVVEPYNATLSVHQLVENADETFC  145 (369)
T ss_pred             ---ccchhhcceeeeeccCccccCcchhhHHHHHHhccchhcccccccCccc--ccceecccccccchhhhhcCCCcccc
Confidence               899999999999999999 899999999999999999999999999875  78999999999999999999999999


Q ss_pred             eeC
Q psy7545         177 LSI  179 (235)
Q Consensus       177 l~~  179 (235)
                      ++|
T Consensus       146 idN  148 (369)
T KOG1375|consen  146 IDN  148 (369)
T ss_pred             ccc
Confidence            998

>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes

Probab=99.47  E-value=8.1e-14  Score=127.48  Aligned_cols=91  Identities=18%  Similarity=0.254  Sum_probs=83.3

Q ss_pred             cchhhHHHHHHhhhhhccc--ccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhh
Q psy7545          86 LMTEDWTDKVRSFVEECDC--LQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTAL  162 (235)
Q Consensus        86 ~~~e~i~d~IRk~~E~CD~--lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~L  162 (235)
                      +..++..|.||+++|.||.  +|+|+++++++||| +|+++.+++.++++|+ ++++++.++|+..   +..+++||+++
T Consensus        77 ~~aee~~e~I~~~le~~~~~~~d~~~i~aglGGGTGsG~~p~iae~lke~~~-~~~~~iv~~P~~~---eg~~~~~NA~~  152 (349)
T cd02202          77 EVAEEDLEEVMRAIDDRGTSDADAILVIAGLGGGTGSGGAPVLAKELKERYE-EPVYALGVLPARE---EGERYSANAAR  152 (349)
T ss_pred             HHHHHHHHHHHHHHhccccccccEEEEecccCCCccccHHHHHHHHHHHhCC-ccEEEEEEecCCC---CCchhhHHHHH
Confidence            3457788899999999997  99999999999999 8999999999999999 8888999999753   34889999999


Q ss_pred             hHhhhhhcccEEEEeeCC
Q psy7545         163 FFASLSELSDVFSPLSIS  180 (235)
Q Consensus       163 sl~~l~e~sd~~~pl~~~  180 (235)
                      +++.|.+++|.+++++|.
T Consensus       153 ~l~~L~~~~D~viv~dNd  170 (349)
T cd02202         153 SLDALSEEADAIILFDND  170 (349)
T ss_pred             HHHHHHHhCCEEEEEehH
Confidence            999999999999999995

FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.

>cd02191 FtsZ FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes

Probab=99.30  E-value=2.5e-12  Score=115.63  Aligned_cols=120  Identities=17%  Similarity=0.126  Sum_probs=90.8

Q ss_pred             CCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCc
Q psy7545          72 FDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLE  150 (235)
Q Consensus        72 f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~  150 (235)
                      -+++..|++.      .++.+|+||+.+|.||.   |+++++++||| +|+++.+++.++++|+    ++++|.|.+.. 
T Consensus        61 G~~~~~G~~~------a~e~~~~I~~~le~~D~---v~i~aglGGGTGSG~ap~ia~~~ke~~~----~~~~vvt~Pf~-  126 (303)
T cd02191          61 GANPELGAEA------AEEVQEAIDNIPVHVDM---VFITAGLGGGTGTGGAPVVAEHLKRIGT----LTVAVVTLPFS-  126 (303)
T ss_pred             CCCHHHHHHH------HHHHHHHHHHHHcCCCE---EEEEeccCCccchhHHHHHHHHHHHhCC----CEEEEEeCCcc-
Confidence            3455556544      47899999999999995   99999999999 8999999999999995    46777765432 


Q ss_pred             cchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         151 SNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       151 ~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                      .+..+++||+.++++.|.+++|.+++++|. .+.+.... ..+.. .|+..|.++++.
T Consensus       127 ~Eg~~~~~NA~~~l~~L~~~~D~~iv~dN~-~L~~~~~~-~~~~~-af~~~N~~ia~~  181 (303)
T cd02191         127 DEGGIRMLNAAEGFQTLVREVDNLMVIPNE-KLRQIGEK-ASLEG-AFDHADEVLVRA  181 (303)
T ss_pred             cCCccchhhHHHHHHHHHHhCCEEEEEehH-HHHHHhhc-CChHH-HHHHHHHHHHHH
Confidence            466889999999999999999999999995 23222211 22322 666666666544

FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.

>TIGR00065 ftsZ cell division protein FtsZ

Probab=99.15  E-value=4e-11  Score=109.73  Aligned_cols=118  Identities=14%  Similarity=0.176  Sum_probs=83.8

Q ss_pred             CCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCcc
Q psy7545          73 DCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLES  151 (235)
Q Consensus        73 ~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~  151 (235)
                      ++|..|++.      .++.+|.||+.+|.||.+   +++++++||| ||++. ++..+..|++   ++++++.+.+. ..
T Consensus        79 ~~~~~G~~~------aee~~d~Ir~~le~~D~v---fI~aglGGGTGSG~ap-via~~ake~~---~l~vaivt~Pf-~~  144 (349)
T TIGR00065        79 GNPEIGRKA------AEESRDEIRKLLEGADMV---FITAGMGGGTGTGAAP-VVAKIAKELG---ALTVAVVTKPF-KF  144 (349)
T ss_pred             CCHHHHHHH------HHHHHHHHHHHHhCCCEE---EEEEeccCccchhHHH-HHHHHHHHcC---CCEEEEEeCCc-cc
Confidence            455555444      478999999999999995   9999999999 89877 5556666775   34566654332 24


Q ss_pred             chhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHh
Q psy7545         152 NFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKE  207 (235)
Q Consensus       152 ~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~  207 (235)
                      +..+++||+.+++..|.+++|.+++++|. .+.+..+. ..+.. .|+..|.++++
T Consensus       145 Eg~~r~~nA~~~l~~L~~~~D~vividNd-~L~~~~~~-~~i~~-af~~~N~iia~  197 (349)
T TIGR00065       145 EGLKRRKKAEEGLERLKQAVDTLIVIPND-KLLEVVPN-LPLND-AFKVADDVLVR  197 (349)
T ss_pred             cchhhHHHHHHHHHHHHHhCCEEEEEeCH-HHHHhhcC-CCHHH-HHHHHHHHHHH
Confidence            67889999999999999999999999995 33333222 23322 55555555444

This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.

>cd02201 FtsZ_type1 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes

Probab=99.10  E-value=9.5e-11  Score=105.38  Aligned_cols=121  Identities=12%  Similarity=0.119  Sum_probs=84.8

Q ss_pred             CCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCc
Q psy7545          72 FDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLE  150 (235)
Q Consensus        72 f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~  150 (235)
                      -+++..|++.      .++.+|+||+.+|.||.+   +++++++||| ||+++.+. .+..||++   +++++.+.|. .
T Consensus        61 g~~~~~g~~~------a~~~~~~I~~~l~~~d~v---~i~aglGGGTGSG~ap~ia-~~a~e~g~---~~~~vvt~Pf-~  126 (304)
T cd02201          61 GGDPEVGRKA------AEESREEIKEALEGADMV---FITAGMGGGTGTGAAPVIA-KIAKEMGA---LTVAVVTKPF-S  126 (304)
T ss_pred             CCCHHHHHHH------HHHHHHHHHHHHhCCCEE---EEeeccCCCcchhHHHHHH-HHHHHcCC---CEEEEEeCCc-c
Confidence            3456666544      478889999999999985   9999999999 89977754 56667774   3555554332 2


Q ss_pred             cchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         151 SNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       151 ~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                      .+..+++||+.+++..|.+++|.+++++|. .+.+.......+.. .|+..|.++++.
T Consensus       127 ~Eg~~~~~nA~~~l~~L~~~~d~~ividN~-~L~~~~~~~~~i~~-af~~~n~~ia~~  182 (304)
T cd02201         127 FEGKKRMRQAEEGLEELRKHVDTLIVIPND-KLLEVVDKNLPLLE-AFKLADDVLAQA  182 (304)
T ss_pred             ccchhHHHHHHHHHHHHHHhCCEEEEEecH-HHHHhhccCCCHHH-HHHHHHHHHHHH
Confidence            456799999999999999999999999995 33332222223322 455555554443

FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.

>PRK13018 cell division protein FtsZ; Provisional

Probab=98.76  E-value=1e-08  Score=94.68  Aligned_cols=86  Identities=14%  Similarity=0.127  Sum_probs=72.3

Q ss_pred             chhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHh
Q psy7545          87 MTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFA  165 (235)
Q Consensus        87 ~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~  165 (235)
                      ..++..|.||+.+|.||.   |+++++++||| ||++..+++.+++ ++ ....++.+.|+.   .+-..+..|+.+++.
T Consensus        98 aaee~~d~I~~~le~~D~---vfI~aGLGGGTGSGaapvIa~iake-~g-~ltv~vVt~Pf~---~EG~~r~~nA~~gL~  169 (378)
T PRK13018         98 AAEESRDEIKEVLKGADL---VFVTAGMGGGTGTGAAPVVAEIAKE-QG-ALVVGVVTKPFK---FEGRARMQKAEEGIE  169 (378)
T ss_pred             HHHHHHHHHHHHhcCCCE---EEEEeeccCcchhhHHHHHHHHHHH-cC-CCeEEEEEcCcc---cccHhHHHHHHHHHH
Confidence            347888999999999998   99999999999 8999988888886 54 333455677764   345678899999999


Q ss_pred             hhhhcccEEEEeeCC
Q psy7545         166 SLSELSDVFSPLSIS  180 (235)
Q Consensus       166 ~l~e~sd~~~pl~~~  180 (235)
                      .|.+++|.+++++|.
T Consensus       170 ~L~e~~D~vividNd  184 (378)
T PRK13018        170 RLREAADTVIVIDNN  184 (378)
T ss_pred             HHHHhCCEEEEEecH
Confidence            999999999999995

>PRK09330 cell division protein FtsZ; Validated

Probab=98.68  E-value=3.3e-08  Score=91.49  Aligned_cols=85  Identities=18%  Similarity=0.197  Sum_probs=73.4

Q ss_pred             hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhh
Q psy7545          88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS  166 (235)
Q Consensus        88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~  166 (235)
                      .++..|.||+.+|.||.+   ++++.++||| +|.+. ++..+..|++   +++++|.+.+. ..+..++++|+.+++..
T Consensus        84 aee~~e~I~~~l~~~D~v---fI~AGmGGGTGTGaap-vIA~iake~g---~ltvaVvt~PF-~fEG~~r~~nA~~gL~~  155 (384)
T PRK09330         84 AEESREEIREALEGADMV---FITAGMGGGTGTGAAP-VVAEIAKELG---ILTVAVVTKPF-SFEGKKRMKQAEEGIEE  155 (384)
T ss_pred             HHHHHHHHHHHHcCCCEE---EEEecCCCcccHHHHH-HHHHHHHHcC---CcEEEEEecCc-cccchhHHHHHHHHHHH
Confidence            477889999999999997   8999999999 89888 7778888887   56777777543 35678899999999999


Q ss_pred             hhhcccEEEEeeCC
Q psy7545         167 LSELSDVFSPLSIS  180 (235)
Q Consensus       167 l~e~sd~~~pl~~~  180 (235)
                      |.+++|.++.++|.
T Consensus       156 L~~~~D~vIvi~Nd  169 (384)
T PRK09330        156 LRKHVDTLIVIPND  169 (384)
T ss_pred             HHHHCCEEEEEecH
Confidence            99999999999995

>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning]

Probab=94.07  E-value=0.18  Score=46.26  Aligned_cols=85  Identities=14%  Similarity=0.122  Sum_probs=62.5

Q ss_pred             hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhh
Q psy7545          88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS  166 (235)
Q Consensus        88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~  166 (235)
                      .++..+.|++.++.-|   =+.++..++||| .|.+-.+.+.+++  .........++|...   +-..+.-|+.-.+..
T Consensus        82 Aee~~~~I~~~l~g~d---mvfitaG~GGGTGtGaaPVvakiake--~g~ltvavvt~Pf~~---EG~~r~~~A~~gi~~  153 (338)
T COG0206          82 AEESIEEIEEALKGAD---MVFVTAGMGGGTGTGAAPVVAEIAKE--LGALTVAVVTLPFSF---EGSPRMENAEEGIEE  153 (338)
T ss_pred             HHHHHHHHHHHhccCC---eEEEEeeecCCccccccHHHHHHHHh--cCCcEEEEEEecchh---cCchHHHHHHHHHHH
Confidence            3555666666666655   578889999999 6877777766665  344444667788642   334567799999999


Q ss_pred             hhhcccEEEEeeCC
Q psy7545         167 LSELSDVFSPLSIS  180 (235)
Q Consensus       167 l~e~sd~~~pl~~~  180 (235)
                      |.+++|.++.++|.
T Consensus       154 L~~~~DtlIvi~Nd  167 (338)
T COG0206         154 LREVVDTLIVIPND  167 (338)
T ss_pred             HHHhCCcEEEEecH
Confidence            99999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	235
2btq_B	426	Tubulin btubb; structural protein, cytoskeletal pr	2e-08
3ryc_A	451	Tubulin alpha chain; alpha-tubulin, beta-tubulin,	2e-08
3ryc_B	445	Tubulin beta chain; alpha-tubulin, beta-tubulin, G	4e-08
2bto_A	473	Tubulin btuba; bacterial tubulin, polymerization,	9e-08
3cb2_A	475	Gamma-1-tubulin, tubulin gamma-1 chain; lattice, m	9e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii} Length = 426

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 9/99 (9%)

Query: 48  MRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQG 107
           M   +     +++++     ++      ++G +      + +   + + S VE+   LQG
Sbjct: 82  MSQLFDES--SIVRKIPGAANNWARGYNVEGEK------VIDQIMNVIDSAVEKTKGLQG 133

Query: 108 FQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP 145
           F +     GG G GL +  L+ L+  Y  K    F V+P
Sbjct: 134 FLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVVP 172

>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* 2p4n_A* 1jff_A* 2wbe_A* 3dco_A* ... Length = 451

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 75  YLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEY 133
           Y  G E+       +   D++R   ++C  LQGF +     GG G G  +  ++ L  +Y
Sbjct: 108 YTIGKEII------DLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 161

Query: 134 STKSCLVFPVIP 145
             KS L F + P
Sbjct: 162 GKKSKLEFSIYP 173

>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 1tvk_B* 1tub_B* 1jff_B* 1ia0_B* 1ffx_B* 1sa0_B* 1sa1_B* ... Length = 445

 Score = 52.1 bits (125), Expect = 4e-08
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 75  YLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEY 133
           Y +G E+  S L      D VR   E CDCLQGFQ+     GG G G+    +  +++EY
Sbjct: 106 YTEGAELVDSVL------DVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159

Query: 134 STKSCLVFPVIP 145
             +    F V+P
Sbjct: 160 PDRIMNTFSVMP 171

>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A* Length = 473

 Score = 50.9 bits (122), Expect = 9e-08
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 52  YHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQIL 111
           ++P +     E    N +        G E      +  +   ++   +++CD + G  +L
Sbjct: 89  FNPANLISRTEGAGGNFAV--GYLGAGRE------VLPEVMSRLDYEIDKCDNVGGIIVL 140

Query: 112 SDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIP 145
               GG G G  A  ++ LK++Y     L   V+P
Sbjct: 141 HAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLP 175

>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A* Length = 475

 Score = 50.9 bits (122), Expect = 9e-08
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 17/105 (16%)

Query: 75  YLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFG-GLCASSLQHLKDEY 133
           + QG ++ +         D +    +  D L+GF +     GG G GL +  L+ L D Y
Sbjct: 108 FSQGEKIHEDIF------DIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRY 161

Query: 134 STKSCLVFPVIPPQTLESNFKLRNV-----NTALFFASLSELSDV 173
             K    + V P     +  ++ +V     N+ L    L++ +D 
Sbjct: 162 PKKLVQTYSVFP-----NQDEMSDVVVQPYNSLLTLKRLTQNADC 201

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 2e-05
 Identities = 36/243 (14%), Positives = 74/243 (30%), Gaps = 66/243 (27%)

Query: 10  FNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYH-----PKSFNLIQEYQ 64
           F  +   Q E   +  +  L+   NY           F+ +        P     +   Q
Sbjct: 68  FWTLLSKQEEMVQKFVEEVLR--INY----------KFLMSPIKTEQRQPSMMTRMYIEQ 115

Query: 65  HE---NSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGFGGL 121
            +   N +Q F  Y     V + +        K+R  + E    +   +L D   G G  
Sbjct: 116 RDRLYNDNQVFAKY----NVSRLQPYL-----KLRQALLELRPAKN--VLIDGVLGSG-- 162

Query: 122 CASSLQHLKDEYSTKSCLVFPVIPPQTLESNF-------KLRNVNTA-LFFASLSELSDV 173
                         K+ +   V     ++           L+N N+       L +L   
Sbjct: 163 --------------KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL-- 206

Query: 174 FSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYLECL----N-RTKESLNPI- 227
                I  +  ++++         ++++  + + L +  Y  CL    N +  ++ N   
Sbjct: 207 ---YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263

Query: 228 IGC 230
           + C
Sbjct: 264 LSC 266

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 33/228 (14%), Positives = 67/228 (29%), Gaps = 45/228 (19%)

Query: 33  KNYQLE-ESVKYW-SDFMRTRYHPKSFNLIQEYQHENSSQPFD--CYLQGGEVWKSELMT 88
            N +L   S++      ++++ +     ++   Q+  +   F+  C        K  L T
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC--------KILLTT 272

Query: 89  EDWTDKVRSFVEECDCLQGFQI-LSDATGGFG-----GLCASSLQHLKDEYSTKSCLVFP 142
                  +   +         I L   +          L    L     +   +     P
Sbjct: 273 RF-----KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327

Query: 143 ----VIP------PQTLESNFKLRN---VNTAL--FFASLS--ELSDVFSPLSI-SSDCW 184
               +I         T + N+K  N   + T +      L   E   +F  LS+      
Sbjct: 328 RRLSIIAESIRDGLATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386

Query: 185 NQTETYRKF-PYMEYNVRECIMKELNNSAYLECLNRTKESLNPIIGCY 231
             T         +  +    ++ +L+  + +E   + KES   I   Y
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK--QPKESTISIPSIY 432

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	235
3ryc_B	445	Tubulin beta chain; alpha-tubulin, beta-tubulin, G	100.0
3ryc_A	451	Tubulin alpha chain; alpha-tubulin, beta-tubulin,	100.0
2bto_A	473	Tubulin btuba; bacterial tubulin, polymerization,	100.0
3cb2_A	475	Gamma-1-tubulin, tubulin gamma-1 chain; lattice, m	100.0
2btq_B	426	Tubulin btubb; structural protein, cytoskeletal pr	100.0
3v3t_A	360	Cell division GTPase FTSZ, diverged; TUBZ, tubulin	99.68
2r75_1	338	Cell division protein FTSZ; GTPase, tubulin-like,	99.51
2vap_A	364	FTSZ, cell division protein FTSZ homolog 1; polyme	99.49
1rq2_A	382	Cell division protein FTSZ; cell cycle, tubulin, G	99.45
4dxd_A	396	Cell division protein FTSZ; rossmann fold, GTPase,	99.45
2vaw_A	394	FTSZ, cell division protein FTSZ; bacterial cell d	99.44
1w5f_A	353	Cell division protein FTSZ; complete proteome, GTP	99.44
2vxy_A	382	FTSZ, cell division protein FTSZ; GTP-binding, nuc	99.44
3m89_A	427	FTSZ/tubulin-related protein; partition, TUBZ, GTP	99.43
1ofu_A	320	FTSZ, cell division protein FTSZ; bacterial cell d	99.42
4ei7_A	389	Plasmid replication protein REPX; GTP hydrolase, p	96.74
3r4v_A	315	Putative uncharacterized protein; tubulin, unknown	95.04

>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...

Probab=100.00  E-value=1e-42  Score=323.60  Aligned_cols=200  Identities=21%  Similarity=0.334  Sum_probs=168.2

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccC------------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN------------   67 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~------------   67 (235)
                      ||+|.+|||+||+||||+|+|++ .+++++++++..+||++...++|+||+|++      |++++.++            
T Consensus        14 nQiG~~~We~~~~EHgi~~~g~~-~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~~~~lf~p~~~i~   92 (445)
T 3ryc_B           14 NQIGAKFWEVISDEHGIDPTGSY-HGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF   92 (445)
T ss_dssp             HHHHHHHHHHHHHHTTBCTTSBB-CCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTSTTGGGSCGGGEEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCc-cCCccccccchhhccccCCCCccccceeEecCCchhhhhhhcccccceecccceEE
Confidence            68999999999999999999998 777887788899999999999999999998      45554443            


Q ss_pred             ------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccce
Q psy7545          68 ------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLV  140 (235)
Q Consensus        68 ------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~  140 (235)
                            +||+.|+|+.|+++      .|.++|+|||++|+||+||||+++||++||| ||+|+.++|+|++||||+.+++
T Consensus        93 g~~gAgNN~A~G~yt~G~e~------~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~  166 (445)
T 3ryc_B           93 GQSGAGNNWAKGHYTEGAEL------VDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNT  166 (445)
T ss_dssp             CSSCCTTCHHHHHHSHHHHH------HHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             ccccccCCccccchhhhHHH------HHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccce
Confidence                  34455556666555      5899999999999999999999999999999 8999999999999999999999


Q ss_pred             eeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhhh
Q psy7545         141 FPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAYL  214 (235)
Q Consensus       141 ~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~~  214 (235)
                      |+|+|++.. ++.+++|||++|++++|.+++|++++++|. .+++.......+....|...|.+++++=.+.+-
T Consensus       167 ~sV~Psp~~-s~~vvepYNa~Lsl~~L~e~sD~~~~iDNe-aL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~  238 (445)
T 3ryc_B          167 FSVMPSPKV-SDTVVEPYNATLSVHQLVENTDETYSIDNE-ALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT  238 (445)
T ss_dssp             EEEECCGGG-CSCTTHHHHHHHHHHHHHHHCSEEEEEEHH-HHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcc-ccccccchhhhhhHhhhhcccceeEeecch-hHHHHHHhccCCCCCcchhhHHHHHhcchhhcc
Confidence            999998653 678999999999999999999999999984 222222223345667899999988887665543

>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...

Probab=100.00  E-value=2.4e-42  Score=321.65  Aligned_cols=199  Identities=19%  Similarity=0.234  Sum_probs=163.1

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCc--CCCCccceeccCccCccCCccccc------cccccccC----------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNY--QLEESVKYWSDFMRTRYHPKSFNL------IQEYQHEN----------   67 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~--~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~----------   67 (235)
                      ||+|.+|||+||+||||+|+|++ .++++.  .++...+||++...++|+||+|++      |++++.++          
T Consensus        14 nQIG~~~We~~~~EHgi~~~g~~-~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~g~~~~lf~p~~~   92 (451)
T 3ryc_A           14 VQIGNACWELYCLEHGIQPDGQM-PSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQL   92 (451)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTSCC-CCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHHSTTTTTSCGGGE
T ss_pred             hHHHHHHHHHHHhhcCCCCCCCc-CCcccccccccchhhhcccCCCCccccceeeecCCcchhheeeecccccccCHHHe
Confidence            68999999999999999999998 555543  467889999999999999999998      55555443          


Q ss_pred             --------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCccc
Q psy7545          68 --------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSC  138 (235)
Q Consensus        68 --------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~  138 (235)
                              +||+.|+|+.|+++      .|.++|+|||++|+||+||||+++||++||| ||+++.++|.|+|||||+.+
T Consensus        93 i~gk~gAgNNwA~G~yt~G~e~------~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~  166 (451)
T 3ryc_A           93 ITGKEDAANNYARGHYTIGKEI------IDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK  166 (451)
T ss_dssp             EECSSCCTTCHHHHHHTSHHHH------HHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred             eeccccccCCCCeeecccchHh------HHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcceE
Confidence                    34455566666555      5899999999999999999999999999999 89999999999999999999


Q ss_pred             ceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         139 LVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       139 ~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      ++|+|+|++.. ++.+++|||++|++++|.+++|++++++|. .+++.......+....|...|.+++++=.+.+
T Consensus       167 ~~~~v~P~~~~-s~~vvepYNa~Lsl~~L~e~sD~~~~idNe-aL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT  239 (451)
T 3ryc_A          167 LEFSIYPAPQV-STAVVEPYNSILTTHTTLEHSDCAFMVDNE-AIYDICRRNLDIERPTYTNLNRLISQIVSSIT  239 (451)
T ss_dssp             EEEEEECCTTT-CCCTTHHHHHHHHHHHHGGGCSEEEEEEHH-HHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCc-ccccceehHHHHHHHHHHhcccceeEeccH-HHHHHHHHhccCCCCCchhhHHHHHhcccccc
Confidence            99999998753 678999999999999999999999999984 23322222234556789999998888754443

>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*

Probab=100.00  E-value=3.6e-36  Score=282.40  Aligned_cols=193  Identities=15%  Similarity=0.204  Sum_probs=157.2

Q ss_pred             CcchhHHHHHHHHHhCCCCC-CCcccCCCCcCCCCccceec---cCccCccCCccccc------cccccccC--------
Q psy7545           6 NPKSFNLIQEYQHENSSQPF-DCYLQDCKNYQLEESVKYWS---DFMRTRYHPKSFNL------IQEYQHEN--------   67 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~-g~~~~~~~~~~le~~~~~ws---d~~~~~~~PRsl~v------i~~~~~~~--------   67 (235)
                      ||+|-+|||++|+||||+|+ |++ .+++++ ++...+||+   +...++|+||+|++      |++++.++        
T Consensus        16 nqIG~~~We~~~~Ehgi~~~~g~~-~~~~~~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i~~~~~~lf~p~~   93 (473)
T 2bto_A           16 NQIAASFWKTVCLEHGIDPLTGQT-APGVAP-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATSGSLFNPAN   93 (473)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTTCCC-SSSCCC-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHHHHHSTTCSCGGG
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCee-cCCCcc-cccccceecccccccCCceeeeeeEecCcchhhhhhhccccccccccc
Confidence            78999999999999999999 987 556666 788899999   99999999999998      33332222        


Q ss_pred             ---------CCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcc
Q psy7545          68 ---------SSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKS  137 (235)
Q Consensus        68 ---------~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~  137 (235)
                               ++|+.|+|+.|++      ..|+++|+||+++|+||.+|||+++++++||| ||+++.++|.|+|+|||+.
T Consensus        94 ~it~~~GAgnn~a~G~~~~G~~------~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~~  167 (473)
T 2bto_A           94 LISRTEGAGGNFAVGYLGAGRE------VLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIP  167 (473)
T ss_dssp             EEECSSCCTTCHHHHHTSHHHH------HHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSC
T ss_pred             eEecccCCCCCcCCCcchhhHH------HHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCCc
Confidence                     2233344555543      45899999999999999999999999999999 8999999999999999999


Q ss_pred             cceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC---ccccccCCCCCCCCCccccchhhHHHhhhhh
Q psy7545         138 CLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS---SDCWNQTETYRKFPYMEYNVRECIMKELNNS  211 (235)
Q Consensus       138 ~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~---~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~  211 (235)
                      +++++|+|++.. ++.++++||++|+++.|.+++|++++++|.   ..++++.    .++...|+..|.++++.=.+
T Consensus       168 ilt~~V~P~~~~-~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l----~i~~~~f~~~N~lia~~v~~  239 (473)
T 2bto_A          168 VLSCAVLPSPQV-SSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKW----NIESPTVDDLNLLITEALAG  239 (473)
T ss_dssp             EEEEEEECCCCS-SCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTS----CCSSCCHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCcc-ccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhcccc----ccCcchHHHHHHHHhhhccc
Confidence            999999998643 678999999999999999999999999984   3444443    35556788888877765443

>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*

Probab=100.00  E-value=1.4e-35  Score=278.36  Aligned_cols=203  Identities=17%  Similarity=0.244  Sum_probs=163.7

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccCCC----------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS----------   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~----------   69 (235)
                      ||+|-.||+++|.||||+|+|.+ .+++...++...+||++...++|+||+|++      |++++.++..          
T Consensus        15 nqIG~~fWe~~~~Ehgi~~~g~~-~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~~~~lf~p~~~i~   93 (475)
T 3cb2_A           15 NQIGFEFWKQLCAEHGISPEAIV-EEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYL   93 (475)
T ss_dssp             HHHHHHHHHHHHHHTTBCTTSCB-CTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHSTTTTTSCGGGEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCC-cCcccccccccceeeeecCCCceecceeEecCCcceeeeeccccccccCCccceee
Confidence            78999999999999999999987 445555667889999999999999999998      4554444322          


Q ss_pred             -----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          70 -----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        70 -----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                           .+.++|+.|+.  .+.+..|+++|+||+++|+||++|||+++++++||| ||+++.++|.|+|+|||+.+++++|
T Consensus        94 g~~g~gAgnn~a~G~~--~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~~lt~~V  171 (475)
T 3cb2_A           94 SEHGGGAGNNWASGFS--QGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSV  171 (475)
T ss_dssp             CCTTCCCTTCHHHHHH--HHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred             cccccCCCCCchhhhh--hhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCceEEEEE
Confidence                 24456777732  234667999999999999999999999999999999 8999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhh
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSA  212 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~  212 (235)
                      +|++...++.++++||++|+++.|.+++|+++|++|. .+++.......+....|...|.++++.=.+.
T Consensus       172 ~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNe-aL~~i~~~~l~i~~p~f~~~N~lia~~vs~i  239 (475)
T 3cb2_A          172 FPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNT-ALNRIATDRLHIQNPSFSQINQLVSTIMSAS  239 (475)
T ss_dssp             ECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHH-HHHHHHHHTSCCSSCCHHHHHHHHHHHHHHH
T ss_pred             ECCccccccceeehhHhHHHHHHHHhhCCEEEEeccH-HHHHHHhhcCCCCcchHHHHHHHHhhhcccc
Confidence            9986323568899999999999999999999999994 2333222233344557888877777655443

>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}

Probab=100.00  E-value=2.6e-35  Score=273.67  Aligned_cols=199  Identities=18%  Similarity=0.210  Sum_probs=150.8

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCC-CcCCCCccceeccCccCccCCccccc------cccccccCCC---------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCK-NYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS---------   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~-~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~---------   69 (235)
                      ||+|-.|||++|.||||+|+|.+ .+++ +++++...+||++...++|+||+|++      |++++.++..         
T Consensus        14 nqIg~~fW~~~~~ehgi~~~g~~-~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~~~~~lf~p~~i~   92 (426)
T 2btq_B           14 NQIADSFWRLALREHGLTEAGTL-KEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGGDMSQLFDESSIV   92 (426)
T ss_dssp             HHHHHHHHHHHHHHHTBCTTSBB-CC-------CCCTTTEEEEETTEEEECEEEEEECC------------CCCCTTSEE
T ss_pred             hHHHHHHHHHHHHHcCCCCCCCc-cCcccccccccccceeeecCCCceeeeeEEEecCccccccccccccccccCccccc
Confidence            78999999999999999999998 4555 56678889999999999999999998      4444443211         


Q ss_pred             ----CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeee
Q psy7545          70 ----QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVI  144 (235)
Q Consensus        70 ----~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~  144 (235)
                          .+.++|+.|.... +.+..|+++|+||+++|+||.+|||+++++++||| ||+++.+++.|+|+|||+.+++++|+
T Consensus        93 ~g~~gAgnn~a~G~~~~-G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~  171 (426)
T 2btq_B           93 RKIPGAANNWARGYNVE-GEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVV  171 (426)
T ss_dssp             ECCSCCTTCHHHHHTHH-HHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEE
T ss_pred             ccccCccCcccccccch-hHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEEEEe
Confidence                1233433331111 12345899999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC---ccccccCCCCCCCCCccccchhhHHHhhhhhh
Q psy7545         145 PPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS---SDCWNQTETYRKFPYMEYNVRECIMKELNNSA  212 (235)
Q Consensus       145 p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~---~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~  212 (235)
                      |.+.. ++.++++||++|+++.|.+++|+++|++|.   ..++++..     ..-.|...|.++++.=.+.
T Consensus       172 p~p~~-~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-----~~~~f~~~N~lia~~v~~i  236 (426)
T 2btq_B          172 PSPLI-SDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-----RSPNYMDLNNIIALIVSSV  236 (426)
T ss_dssp             CCGGG-CCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-----SCCCHHHHHHHHHHHHHHH
T ss_pred             cCCcc-ccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-----CCcHHHHHHHHHHhhhcch
Confidence            98643 578899999999999999999999999984   34444443     2336777777766654443

>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}

Probab=99.68  E-value=2.1e-17  Score=149.00  Aligned_cols=117  Identities=12%  Similarity=0.060  Sum_probs=97.3

Q ss_pred             CCCCCCcccccccccccchhhHH-HHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCC
Q psy7545          70 QPFDCYLQGGEVWKSELMTEDWT-DKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQ  147 (235)
Q Consensus        70 ~~f~~y~~G~~~~~~~~~~e~i~-d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~  147 (235)
                      .+-++|..|++..      ++.. |.||+.+|+|+.+|||+++|+++||| ||+++.+++.++++|+++++..++++|++
T Consensus        59 GAG~np~vG~eaa------ee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~~vtV~Pf~  132 (360)
T 3v3t_A           59 GCGKERKKAVGYA------QTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKA  132 (360)
T ss_dssp             ---CCHHHHHHHH------GGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEECCT
T ss_pred             CCCCCHHHHHHHH------HHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEEEEEEeCCC
Confidence            3456777786664      5666 99999999999999999999999999 89999999999999999999999999986


Q ss_pred             CCccchhhhhhhhhhhHhhhhhccc-----EEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         148 TLESNFKLRNVNTALFFASLSELSD-----VFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       148 ~~~~~~~~~~yN~~Lsl~~l~e~sd-----~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                      .   +.++++||++++++.|.+++|     ++++++|..             ...|...|.++++.
T Consensus       133 ~---Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea-------------~~ay~~lN~lIaq~  182 (360)
T 3v3t_A          133 T---EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK-------------REKESDINKEFATL  182 (360)
T ss_dssp             T---SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG-------------SSSHHHHHHHHHHH
T ss_pred             c---cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC-------------chhHHHHHHHHHHH
Confidence            4   468999999999999999555     669999963             22566667666665

>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*

Probab=99.51  E-value=3.5e-15  Score=134.59  Aligned_cols=123  Identities=13%  Similarity=0.085  Sum_probs=95.5

Q ss_pred             CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545          70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT  148 (235)
Q Consensus        70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~  148 (235)
                      .+-++|..|++.      .++.+|+||+++|.||.+   +++++++||| ||+++. ++++.+||+   +++++|+|.+.
T Consensus        66 GAGnn~a~G~~~------~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~e~g---~lt~~Vv~~P~  132 (338)
T 2r75_1           66 GAGAKPEVGEEA------ALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAKEMG---ILTVAVATLPF  132 (338)
T ss_dssp             CCTTCHHHHHHH------HHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHHHTT---CEEEEEEEECC
T ss_pred             CCCCChHHHHHH------HHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHHhcC---CCEEEEeCCCc
Confidence            355677788655      489999999999999998   9999999999 899888 888999997   56888888664


Q ss_pred             CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                      . .+.++++||++++++.|.+++|.+++++|. .+++.......+. -.|+..|.++++.
T Consensus       133 ~-~eg~~~~ynA~~~l~~L~e~~D~~ividNe-~L~~i~~~~l~i~-~af~~~N~~i~~~  189 (338)
T 2r75_1          133 R-FEGPRKMEKALKGLEKLKESSDAYIVIHND-KIKELSNRTLTIK-DAFKEVDSVLSKA  189 (338)
T ss_dssp             G-GGCHHHHHHHHHHHHHHHHTCSEEEEEEHH-HHHHTSCCCSSHH-HHHHHHHHHHHHH
T ss_pred             c-ccchhhHHHHHHHHHHHHhcCCeEEEeccH-HHHhhhhccCChH-HHHHHHHHHHHHH
Confidence            3 578899999999999999999999999984 3333322222222 2566666666653

>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*

Probab=99.49  E-value=1e-14  Score=132.66  Aligned_cols=123  Identities=13%  Similarity=0.141  Sum_probs=95.7

Q ss_pred             CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545          70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT  148 (235)
Q Consensus        70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~  148 (235)
                      .+-++|..|++.      .++.+|.||+.+|.||.+   +++|+++||| ||+++.+++.+++ |   .+++++|+|.+.
T Consensus        96 GAGnn~a~G~~~------~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~---~~lt~~Vv~~Pf  162 (364)
T 2vap_A           96 GAGGNPKIGEEA------AKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I---GALTVAVVTLPF  162 (364)
T ss_dssp             CCTTCHHHHHHH------HHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T---TCEEEEEEEECC
T ss_pred             CCCCChHHHHHH------HHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h---CCcEEEEeCCCc
Confidence            355678888544      478999999999999988   9999999999 8999999999997 7   356788877654


Q ss_pred             CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhh
Q psy7545         149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELN  209 (235)
Q Consensus       149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~  209 (235)
                       ..+.++++||++++++.|.+++|.+++++|. .+++... ...+ .-.|+..|.++++.=
T Consensus       163 -~~eg~~~~ynA~~~l~~L~e~~D~~ividNe-aL~~i~~-~l~i-~~af~~~N~li~~~v  219 (364)
T 2vap_A          163 -VMEGKVRMKNAMEGLERLKQHTDTLVVIPNE-KLFEIVP-NMPL-KLAFKVADEVLINAV  219 (364)
T ss_dssp             -GGGCHHHHHHHHHHHHHHHTTCSEEEEEEGG-GHHHHST-TCCH-HHHHHHHHHHHHHHH
T ss_pred             -cccchhHHHHHHHHHHHHHHhCCeEEEEcHH-HHHHHHc-cCCh-hhhhhhHHHHHHHHH
Confidence             3566899999999999999999999999995 3433332 2222 335666666666543

>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*

Probab=99.45  E-value=1.9e-14  Score=131.48  Aligned_cols=138  Identities=12%  Similarity=0.073  Sum_probs=96.9

Q ss_pred             CCccccccccccccCCCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHh
Q psy7545          53 HPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKD  131 (235)
Q Consensus        53 ~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~d  131 (235)
                      .|+.+++-+++-.  ...+-++|..|++.      .++.+|.||+++|.||   +|+++|+++||| ||+++.+++ +..
T Consensus        55 a~~~i~iG~~~t~--G~GAG~n~~~G~~~------aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~  122 (382)
T 1rq2_A           55 ADVKLDVGRDSTR--GLGAGADPEVGRKA------AEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IAR  122 (382)
T ss_dssp             CSEEEECCTTTC-------CCCHHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHH
T ss_pred             CCcEEEecccccC--CCCCCCChHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHH
Confidence            4666555433211  12355678888665      4789999999999998   499999999999 899999998 888


Q ss_pred             hcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         132 EYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       132 ey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                      ||+   +++++|.|.+. ..+.++++||++++++.|.+++|.+++++|. .+++.......+. -.|...|.++++.
T Consensus       123 e~g---~ltvsVv~~Pf-~~Eg~~~~~nA~l~l~~L~e~~D~~ividNe-aL~~i~~~~l~i~-~af~~~N~li~~~  193 (382)
T 1rq2_A          123 KLG---ALTVGVVTRPF-SFEGKRRSNQAENGIAALRESCDTLIVIPND-RLLQMGDAAVSLM-DAFRSADEVLLNG  193 (382)
T ss_dssp             HHT---CEEEEEEEECC-GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHH-HHTTSSCTTCCHH-HHHHHHHHHHHHH
T ss_pred             HcC---CcEEEEEecCc-ccccchHHHHHHHHHHHHHHhCCEEEEEech-hHHHHhcCCCCHH-HHHHHHHHHHHHH
Confidence            898   45566665443 2577899999999999999999999999994 2333222222222 2466666665553

>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*

Probab=99.45  E-value=3.6e-14  Score=129.34  Aligned_cols=123  Identities=11%  Similarity=0.115  Sum_probs=93.1

Q ss_pred             CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545          70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT  148 (235)
Q Consensus        70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~  148 (235)
                      .+-++|..|++.      .++..|+||+.+|.||.   |+++++++||| ||+++.++ .+..||+   +++++|+|.+.
T Consensus        76 GAG~np~vG~ea------aee~~d~Ir~~le~~D~---ffItagmGGGTGSGaapvIa-eiake~g---~LtvsVVt~Pf  142 (396)
T 4dxd_A           76 GAGANPEIGKKA------AEESREQIEDAIQGADM---VFVTSGMGGGTGTGAAPVVA-KIAKEMG---ALTVGVVTRPF  142 (396)
T ss_dssp             CCTTCHHHHHHH------HHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHH-HHHHHTT---CEEEEEEEECC
T ss_pred             CCCCChHHHHHH------HHHHHHHHHHHHcCCCE---EEEEeccCCCccccHHHHHH-HHHHhcC---CceEEEEeCCc
Confidence            455677888655      47899999999999994   99999999999 89999765 5777886   46888876554


Q ss_pred             CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                       ..+..+++||++++++.|.+++|++++++|. .+++.......+.. .|...+.++++.
T Consensus       143 -~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNe-aL~~I~~~~l~i~~-af~~aN~ll~q~  199 (396)
T 4dxd_A          143 -SFEGRKRQTQAAAGVEAMKAAVDTLIVIPND-RLLDIVDKSTPMME-AFKEADNVLRQG  199 (396)
T ss_dssp             -GGGCHHHHHHHHHHHHHHHHHSSEEEEEEGG-GGGGTCCTTCCHHH-HHHHHHHHHHHH
T ss_pred             -cccchHHHHHHHHHHHHHHhhCCEEEEEcCH-HHHHhhcccccHHH-HHHHHHHHHHHH
Confidence             2567899999999999999999999999995 34433332222222 566666665554

>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1

Probab=99.44  E-value=1.5e-14  Score=132.65  Aligned_cols=112  Identities=14%  Similarity=0.053  Sum_probs=88.0

Q ss_pred             CCccccccccccccCCCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHh
Q psy7545          53 HPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKD  131 (235)
Q Consensus        53 ~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~d  131 (235)
                      .|+.+++-+++-.  ...+-++|..|++.      .++.+|.||+++|.||   +|+++|+++||| ||+++.+++.++ 
T Consensus        55 a~~ki~iG~~~t~--G~GAG~n~~~G~~~------aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k-  122 (394)
T 2vaw_A           55 ARTVLQLGPGVTK--GLGAGANPEVGRQA------ALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK-  122 (394)
T ss_dssp             SSCEEECCHHHHS--SSCCCSCHHHHHHH------HHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH-
T ss_pred             CCcEEEccccccC--CCCCCCCHHHHHHH------HHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH-
Confidence            3555554333211  12456778888655      4788999999999998   499999999999 899999999888 


Q ss_pred             hcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545         132 EYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS  180 (235)
Q Consensus       132 ey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~  180 (235)
                      ||+   +++++|+|.+. ..+.++++||+.++++.|.+++|.+++++|.
T Consensus       123 e~g---~ltvsVv~~Pf-~~Eg~~r~ynA~~~l~~L~e~~D~~ividNe  167 (394)
T 2vaw_A          123 EMG---ILTVAVVTRPF-PFEGRKRMQIADEGIRALAESVDSLITIPNE  167 (394)
T ss_dssp             HHT---CEEEEEEEECC-GGGHHHHHHHHHHHHHHHHTTCSEEEEEEHH
T ss_pred             HcC---CcEEEEecCCc-ccccchhhHHHHHHHHHHHHhCCEEEEEecH
Confidence            674   55677776543 2567899999999999999999999999994

>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1

Probab=99.44  E-value=3.2e-14  Score=128.96  Aligned_cols=123  Identities=11%  Similarity=0.040  Sum_probs=92.6

Q ss_pred             CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545          70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT  148 (235)
Q Consensus        70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~  148 (235)
                      .+-++|..|++.      .++.+|.||+.+|.||.   |+++|+++||| ||+++.+++.+++ |+   +++++|+|.+.
T Consensus        80 GAG~n~~~G~~~------aee~~d~I~~~le~~d~---~~i~as~GGGTGSG~ap~la~~~ke-~g---~lt~~Vvt~Pf  146 (353)
T 1w5f_A           80 GAGGRPEIGEQA------ALESEEKIREVLQDTHM---VFITAGFGGGTGTGASPVIAKIAKE-MG---ILTVAIVTTPF  146 (353)
T ss_dssp             CCTTCHHHHHHH------HHHTHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHH-TT---CEEEEEEEECC
T ss_pred             CCCCChHHHHHH------HHHHHHHHHHHHccCCE---EEEEeccCCCccccHHHHHHHHHHH-hC---CcEEEEEeCCc
Confidence            355678888655      47889999999999984   99999999999 8999999988886 65   66777776543


Q ss_pred             CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                       ..+.++++||+.++++.|.+++|.+++++|. .+++.......+. -.|+..|.++++.
T Consensus       147 -~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe-aL~~i~~~~l~i~-~af~~~N~ll~~~  203 (353)
T 1w5f_A          147 -YFEGPERLKKAIEGLKKLRKHVDTLIKISNN-KLMEELPRDVKIK-DAFLKADETLHQG  203 (353)
T ss_dssp             -GGGCHHHHHHHHHHHHHHHHTCSEEEEEEHH-HHHTTSCTTCCHH-HHHHHHHHHHHHH
T ss_pred             -ccccchhHHHHHHHHHHHHhhCCEEEEEecH-HHHhhhcccCCHH-HHHHHHHHHHHHH
Confidence             2567899999999999999999999999994 3333322222222 1455555555553

>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*

Probab=99.44  E-value=2.6e-14  Score=130.64  Aligned_cols=123  Identities=12%  Similarity=0.118  Sum_probs=92.3

Q ss_pred             CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCC
Q psy7545          70 QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQT  148 (235)
Q Consensus        70 ~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~  148 (235)
                      .+-++|..|++.      .++.+|.||+++|.||.   |+++|+++||| ||+++.+++.+++ |+   +++++|+|.+.
T Consensus        70 GAGnn~a~G~e~------aee~~d~Ir~~le~~D~---ffI~asmGGGTGSG~apvla~~ake-~g---~ltvsVvt~Pf  136 (382)
T 2vxy_A           70 GAGANPEVGKKA------AEESKEQIEEALKGADM---VFVTAGMGGGTGTGAAPVIAQIAKD-LG---ALTVGVVTRPF  136 (382)
T ss_dssp             CCTTCHHHHHHH------HHHTHHHHHHHHTTCSE---EEEEEESSSSHHHHHHHHHHHHHHH-TT---CEEEEEEEECC
T ss_pred             CCCCChHHHHHH------HHHHHHHHHHHHhhCCE---EEEEeccCCCCCCcHHHHHHHHHHH-hC---CCeEEEEeCCc
Confidence            456778888655      47889999999999984   99999999999 8999999887764 85   55677776554


Q ss_pred             CccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhh
Q psy7545         149 LESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKEL  208 (235)
Q Consensus       149 ~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i  208 (235)
                       ..+.++++||+.++++.|.+++|.+++++|. .+++.......+. -.|+..|.++++.
T Consensus       137 -~~Eg~~r~~nA~l~l~~L~e~~D~~ividNe-aL~~i~~~~l~i~-~af~~~N~ll~~~  193 (382)
T 2vxy_A          137 -TFEGRKRQLQAAGGISAMKEAVDTLIVIPND-RILEIVDKNTPML-EAFREADNVLRQG  193 (382)
T ss_dssp             -GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHH-HHHHHSCTTCCHH-HHHHHHHHHHHHH
T ss_pred             -ccccchhHHHHHHHHHHHHHhCCEEEEEccH-HHHHHHHhcCCHH-HHHHHHHHHHHHH
Confidence             3577999999999999999999999999994 2333222222222 1466566655553

>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*

Probab=99.43  E-value=6.6e-14  Score=128.57  Aligned_cols=103  Identities=10%  Similarity=0.072  Sum_probs=85.3

Q ss_pred             CCCccccccc------ccccchhhHHHHHHhhhh---hcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceee
Q psy7545          73 DCYLQGGEVW------KSELMTEDWTDKVRSFVE---ECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFP  142 (235)
Q Consensus        73 ~~y~~G~~~~------~~~~~~e~i~d~IRk~~E---~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~  142 (235)
                      ++|..|++..      ...++.|++++.||+.+|   .||.+++|+++++++||| +|+++.+++.++++|+++.+.+++
T Consensus       107 ~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la~~lke~~~~~~~~~vv  186 (427)
T 3m89_A          107 RTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLI  186 (427)
T ss_dssp             ----CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHHHHHTTCSSSCEEEEE
T ss_pred             CCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHHHHHHHhcCCCcEEEEE
Confidence            4677776665      211347899999999999   889999999999999999 899999999999999999999999


Q ss_pred             eeCCCCCccchhhhhhhhhhhHhhh---hh------------cccEEEEeeCC
Q psy7545         143 VIPPQTLESNFKLRNVNTALFFASL---SE------------LSDVFSPLSIS  180 (235)
Q Consensus       143 v~p~~~~~~~~~~~~yN~~Lsl~~l---~e------------~sd~~~pl~~~  180 (235)
                      ++|++.   +  .++||++++++.|   .+            ++|.+++++|.
T Consensus       187 t~P~~~---e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe  234 (427)
T 3m89_A          187 SLPSGD---P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNT  234 (427)
T ss_dssp             EECCSC---H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHH
T ss_pred             EECCCC---c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehH
Confidence            999753   2  3459999999997   44            99999999995

>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1

Probab=99.42  E-value=7.4e-14  Score=125.07  Aligned_cols=112  Identities=13%  Similarity=0.063  Sum_probs=85.9

Q ss_pred             CCccccccccccccCCCCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHh
Q psy7545          53 HPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKD  131 (235)
Q Consensus        53 ~PRsl~vi~~~~~~~~~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~d  131 (235)
                      .|+.+++-+++-.  ...+-++|..|++.      .++.+|+||+.+|.||.   |+++|+++||| ||+++.++ ++..
T Consensus        55 a~~~i~iG~~~t~--g~GAG~n~~~G~~~------~ee~~d~I~~~le~~d~---~~i~as~GGGTGSG~~~~la-~~a~  122 (320)
T 1ofu_A           55 ARTVLQLGPGVTK--GLGAGANPEVGRQA------ALEDRERISEVLEGADM---VFITTGMGGGTGTGAAPIIA-EVAK  122 (320)
T ss_dssp             CSEEEECCHHHHT--TBCCCSCHHHHHHH------HHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHH-HHHH
T ss_pred             CCcEEEccCCccC--CCCCCCCHHHHHHH------HHHHHHHHHHHHhhCCE---EEEEeecCCCccccHHHHHH-HHHH
Confidence            4665554333211  12356778888655      47889999999999984   99999999999 89999665 5677


Q ss_pred             hcCCcccceeeeeCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545         132 EYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSIS  180 (235)
Q Consensus       132 ey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~  180 (235)
                      ||+   +++++|+|.|. ..+.++++||+.++++.|.+++|.+++++|.
T Consensus       123 e~g---~lt~~vv~~P~-~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe  167 (320)
T 1ofu_A          123 EMG---ILTVAVVTRPF-PFEGRKRMQIADEGIRALAESVDSLITIPNE  167 (320)
T ss_dssp             HTT---CEEEEEEEECC-GGGCHHHHHHHHHHHHHHHTTCSEEEEEEHH
T ss_pred             hcC---CcEEEEEeCCc-cccchhHHHHHHHHHHHHHHhCCEEEEEecH
Confidence            884   45667765443 2567899999999999999999999999994

>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*

Probab=96.74  E-value=0.002  Score=58.84  Aligned_cols=102  Identities=13%  Similarity=0.059  Sum_probs=66.8

Q ss_pred             CCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCc
Q psy7545          72 FDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLE  150 (235)
Q Consensus        72 f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~  150 (235)
                      -+++..|++...  +-.+++.+.|+..++.+|-   +.+++.++||| +|.+..+++.+++. + .+......+|.....
T Consensus        84 G~~p~~G~~aa~--e~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke~-~-~~~~~vvt~Pf~~Eg  156 (389)
T 4ei7_A           84 ARNPQVGEEAFV--KHETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYEH-D-YNFGLLLTLPRDAEA  156 (389)
T ss_dssp             CCCHHHHHHHHH--HTHHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHHT-T-CCEEEEEEECCGGGH
T ss_pred             CCChHHHHHHHH--HHHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHHc-C-CCEEEEEEeCCCcCc
Confidence            344555544432  3345666677766677775   68999999999 89999888888773 2 223344557864322


Q ss_pred             cchhhhhhhhhhhHhhhhhcccEEEEeeCC
Q psy7545         151 SNFKLRNVNTALFFASLSELSDVFSPLSIS  180 (235)
Q Consensus       151 ~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~  180 (235)
                      .......++.+..+....+.+|.+++++|.
T Consensus       157 ~~~~~~A~~~i~~l~~~~~~vd~~ividN~  186 (389)
T 4ei7_A          157 LKVLENATSRIRSIAMNQEAFGSIVLIDNA  186 (389)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGSSEEEEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHhccCCeEEEeccH
Confidence            234455556566666657889999999994

>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*

Probab=95.04  E-value=0.031  Score=49.00  Aligned_cols=96  Identities=14%  Similarity=0.076  Sum_probs=59.2

Q ss_pred             cccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchh
Q psy7545          76 LQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFK  154 (235)
Q Consensus        76 ~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~  154 (235)
                      +.|.+.-...+..++-.+.|++.+|.+|-   +.++.+++||| +|.+--+.+.+++.-.  ...++.+.|.+  .....
T Consensus        55 GAGgdpe~g~e~a~e~~~eI~~~l~~aD~---VFVtaGLGGGTGTGaAPVvAeiake~Ga--lvVavVt~~~E--~~~~~  127 (315)
T 3r4v_A           55 GAGGNRKVILPLVRPQIPALMDTIPEADF---YIVCYSLGGGSGSVLGPLITGQLADRKA--SFVSFVVGAME--STDNL  127 (315)
T ss_dssp             C---CHHHHHHHHGGGHHHHHHTSCCBSC---EEEEEESSSSSHHHHHHHHHHHHHHTTC--CEEEEEEECCS--SHHHH
T ss_pred             CCCCChHHHHHHHHhhHHHHHHhcCCCCE---EEEEeccCCccccchHHHHHHHHHHcCC--CEEEEEecCCC--cchhh
Confidence            44443322223334444567777777665   68999999999 8988888888887622  33445555532  12233


Q ss_pred             hhhhhhhhhHhhhhhcccEEEEee
Q psy7545         155 LRNVNTALFFASLSELSDVFSPLS  178 (235)
Q Consensus       155 ~~~yN~~Lsl~~l~e~sd~~~pl~  178 (235)
                      ....|++-++..|.+.+|..+.++
T Consensus       128 ~Nai~al~~LE~La~~~dt~Iv~d  151 (315)
T 3r4v_A          128 GNDIDTMKTLEAIAVNKHLPIVVN  151 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             hchHHHHHHHHHHHhccCCcEEEe
Confidence            333456777888888888777666

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	235
d1tubb1	243	c.32.1.1 (B:1-245) Tubulin beta-subunit {Pig (Sus	2e-09
d1tuba1	245	c.32.1.1 (A:1-245) Tubulin alpha-subunit {Pig (Sus	6e-09
d2btoa1	244	c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthec	4e-07

>d1tubb1 c.32.1.1 (B:1-245) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]} Length = 243

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Tubulin beta-subunit
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 53.4 bits (128), Expect = 2e-09
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 10/128 (7%)

Query: 47  FMRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQ 106
                + P +F   Q     N ++    Y +G E+  S L      D VR   E CDCLQ
Sbjct: 80  PFGQIFRPDNFVFGQSGAGNNWAK--GHYTEGAELVDSVL------DVVRKESESCDCLQ 131

Query: 107 GFQILSDATGGFG-GLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFA 165
           GFQ+     GG G G+    +  +++EY  +    F V+P   + S+  +   N  L   
Sbjct: 132 GFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKV-SDTVVEPYNATLSVH 190

Query: 166 SLSELSDV 173
            L E +D 
Sbjct: 191 QLVENTDE 198

>d1tuba1 c.32.1.1 (A:1-245) Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 9823]} Length = 245

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Tubulin alpha-subunit
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 52.3 bits (125), Expect = 6e-09
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 10/126 (7%)

Query: 49  RTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGF 108
           R  +HP+     +E    N ++    +   G+     ++     D++R   ++C  LQGF
Sbjct: 84  RQLFHPEQLITGKEDAANNYAR---GHYTIGKEIIDLVL-----DRIRKLADQCTGLQGF 135

Query: 109 QILSDATGGFGGLCASSL-QHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFASL 167
            +     GG G    S L + L  +Y  KS L F + P   + +   +   N+ L   + 
Sbjct: 136 SVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA-VVEPYNSILTTHTT 194

Query: 168 SELSDV 173
            E SD 
Sbjct: 195 LEHSDC 200

>d2btoa1 c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]} Length = 244

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Tubulin alpha-subunit
species: Prosthecobacter dejongeii [TaxId: 48465]

 Score = 46.9 bits (111), Expect = 4e-07
 Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 48  MRTRYHPKSFNLIQEYQHENSSQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQG 107
             + ++P +     E    N        +      +   +  +   ++   +++CD + G
Sbjct: 83  SGSLFNPANLISRTEGAGGN------FAVGYLGAGRE--VLPEVMSRLDYEIDKCDNVGG 134

Query: 108 FQILSDATGGFGGLCASSL-QHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS 166
             +L    GG G    + L + LK++Y     L   V+P   + S       NT     +
Sbjct: 135 IIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSVV-TEPYNTVFALNT 193

Query: 167 LSELSDV 173
           L   +D 
Sbjct: 194 LRRSADA 200

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	235
d1tuba1	245	Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 98	100.0
d1tubb1	243	Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 982	100.0
d2btoa1	244	Tubulin alpha-subunit {Prosthecobacter dejongeii [	100.0
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	96.87
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	96.75
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	96.69
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	96.59

>d1tuba1 c.32.1.1 (A:1-245) Tubulin alpha-subunit {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Tubulin alpha-subunit
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=5.5e-43  Score=301.21  Aligned_cols=204  Identities=18%  Similarity=0.218  Sum_probs=165.1

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCC--CcCCCCccceeccCccCccCCccccc------cccccccCCCC-------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCK--NYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSSQ-------   70 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~--~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~~-------   70 (235)
                      ||+|.+|||++|.||||+++|.. ..++  ++..+...+||++..+.+|+||||++      |+++..++..+       
T Consensus        14 nQIG~~~w~~l~~Eh~i~~~g~~-~~~~~~~~~~~~~~~fF~e~~~~~~~pRavlvD~E~~vI~~i~~~~~~~~f~~~~~   92 (245)
T d1tuba1          14 VQIGNACWELYCLEHGIQPDGQM-PSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQL   92 (245)
T ss_dssp             HHHHHHHHHHHTTTCCTTTCCCC-SCCTTSSTTCCCSCCSSCSSSCTTTSCSCCEEESSHHHHHHHSGGGCSCCCCSSSE
T ss_pred             HHHHHHHHHHHHHHhCcCCCCCc-cCccccccccccchhhhhcccCCccccceeEecCCcceeeeeccCcchhccCcccc
Confidence            78999999999999999999986 3333  34557778999999999999999998      34433322111       


Q ss_pred             ------CCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          71 ------PFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        71 ------~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                            +-++|+.|+... +.++.|.++|.|||++|+||++|||+++||++||| ||+||+++|.|+|+|||+.+++++|
T Consensus        93 i~~~~gsgNNwA~Gy~~~-G~~~~d~i~d~iRk~~E~cD~l~gf~i~hSl~GGTGSGlGs~l~e~l~d~yp~~~~~~~~V  171 (245)
T d1tuba1          93 ITGKEDAANNYARGHYTI-GKEIIDLVLDRIRKLADQCTGLQGFSVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSI  171 (245)
T ss_dssp             EECCSCCCCSSSTTTTSH-HHHTTHHHHHHHHHHTTSSSCCCCEEEECCSSCGGGTHHHHHHTHHHHHHTTTSCEEEEEC
T ss_pred             ccCCCCcccchHhhhhcc-chhhHHHHHHHHHHHHHhCCCcCceeeeeecCCcCcCchhHHHHHHHHHhcccccccceEE
Confidence                  223455553332 34557999999999999999999999999999999 9999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      +|+... ++++++|||++|++++|.+++|++++++|. .+.+.......+...+|+..|.++|++-.+.+
T Consensus       172 ~P~~~~-~~~vvqpYNtvLsl~~L~~~sD~v~~~dN~-al~~i~~~~l~i~~~s~~~lN~via~~ls~~T  239 (245)
T d1tuba1         172 YPAPQV-STAVVEPYNSILTTHTTLEHSDCAFMVDNE-AIYDICRRNLDIERPTYTNLNRLIGQIVSSIT  239 (245)
T ss_dssp             CCCSSC-STTTTHHHHHHHHHHHHHHCCCCEEECCHH-HHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHT
T ss_pred             eccccC-CCcccccchhhhhhHHHHhcCCeeEEeehH-HHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhh
Confidence            997643 678999999999999999999999999994 34333334445667789999999998876654

>d1tubb1 c.32.1.1 (B:1-245) Tubulin beta-subunit {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Tubulin beta-subunit
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2e-43  Score=303.94  Aligned_cols=204  Identities=19%  Similarity=0.300  Sum_probs=172.0

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceeccCccCccCCccccc------cccccccCCC----------
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWSDFMRTRYHPKSFNL------IQEYQHENSS----------   69 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~wsd~~~~~~~PRsl~v------i~~~~~~~~~----------   69 (235)
                      ||+|.+||+++|+||||+|+|.. ..+++...+...+||++....+|.||+|++      |+++..++..          
T Consensus        14 nQIG~~fw~~~~~Eh~i~~~g~~-~~~~~~~~~~~~~~f~e~~~~~~~pRav~iD~Ep~vi~~i~~~~~~~~f~~~~~i~   92 (243)
T d1tubb1          14 NQIGAKFWEVISDEHGIDPTGSY-HGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF   92 (243)
T ss_dssp             HHHHHHHGGGTTTSCCSSCCCSS-SSCCCCSSCCSSCCSSTTTTSTTCCCCEECCSSSHHHHHHSSSSSCCCCSSSCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCC-CCCcccchhccccccccCCCCccccceeEecCCcchhhhhccCccccccCccceEE
Confidence            78999999999999999999987 777788888889999999999999999998      3444333222          


Q ss_pred             ---CCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeC
Q psy7545          70 ---QPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIP  145 (235)
Q Consensus        70 ---~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p  145 (235)
                         .+-++|+.|+.. .+.++.|.++|.|||++|+||++|||+++||++||| ||+||+++|.|+|+|||+.+++++|+|
T Consensus        93 ~~~gagNNwA~Gy~~-~G~~~~d~i~d~iRk~~E~cD~l~gf~~~hSl~GGTGSGlGs~l~e~L~d~yp~~~~~~~~V~P  171 (243)
T d1tubb1          93 GQSGAGNNWAKGHYT-EGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP  171 (243)
T ss_dssp             TTCCCCSSTHHHHTS-HHHHHHHHHHHHHHHHHHSSSCEEEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEECCCCC
T ss_pred             cccCcccceeeeeec-cCHHHHHHHHHHHHHHHHhCCCcCceEEEeeccCccccchHHHHHHHHhhhcccceEEEEeecC
Confidence               123466666433 244667999999999999999999999999999999 999999999999999999999999999


Q ss_pred             CCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         146 PQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       146 ~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      ++.. ++++++|||++|++++|.++||++++++|. .+.+-......+...+|+..|.++|++-.+.+
T Consensus       172 ~~~~-~~vvvqpYNtvLsl~~L~~~ad~v~~~dN~-al~~i~~~~~~~~~~s~~~~N~~Ia~~ls~~T  237 (243)
T d1tubb1         172 SPKV-SDTVVEPYNATLSVHQLVENTDETYCIDNE-ALYDICFRTLKLTTPTYGDLNHLVSATMSGVT  237 (243)
T ss_dssp             CTTC-SCSSTTHHHHHHHHHHHSSSEEEECCCCHH-HHHHHTTTTSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred             Cccc-CcccccchHHHHhHHHHHhhCCeEEEeeHH-HHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhh
Confidence            8643 688999999999999999999999999994 45444445556677889999999998876653

>d2btoa1 c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Tubulin alpha-subunit
species: Prosthecobacter dejongeii [TaxId: 48465]

Probab=100.00  E-value=7.5e-43  Score=300.53  Aligned_cols=204  Identities=13%  Similarity=0.154  Sum_probs=160.6

Q ss_pred             CcchhHHHHHHHHHhCCCCCCCcccCCCCcCCCCccceec---cCccCccCCcccccc------cccccc------CC--
Q psy7545           6 NPKSFNLIQEYQHENSSQPFDCYLQDCKNYQLEESVKYWS---DFMRTRYHPKSFNLI------QEYQHE------NS--   68 (235)
Q Consensus         6 ~~~~~~~~e~~~~Ehgi~p~g~~~~~~~~~~le~~~~~ws---d~~~~~~~PRsl~vi------~~~~~~------~~--   68 (235)
                      ||+|.+|||++|+||||+|.+.. ..+.....+...+||+   +....+|+||+|++.      +++...      +.  
T Consensus        14 nQIG~~fw~~l~~EH~i~~~~~~-~~~~~~~~~~~~~ff~~~~e~~~~~~~pRavliD~Ep~vi~~~~~~~~~~f~~~~~   92 (244)
T d2btoa1          14 NQIAASFWKTVCLEHGIDPLTGQ-TAPGVAPRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVKATSGSLFNPANL   92 (244)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTTCC-CSSSCCCSSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHHHHHSTTCSCGGGE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCc-CCCcccccCCccccccccccccCCCcccceEEEcCCcchhhhhccccccccCcccc
Confidence            78999999999999999998875 4444555567777775   667789999999982      222111      10  


Q ss_pred             ----CCCCCCCcccccccccccchhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeee
Q psy7545          69 ----SQPFDCYLQGGEVWKSELMTEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPV  143 (235)
Q Consensus        69 ----~~~f~~y~~G~~~~~~~~~~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v  143 (235)
                          ..+-++|+.|+... +.++.|.++|.|||++|+||++|||+++||++||| ||+||+++|.|+|+|||+.+++++|
T Consensus        93 i~~~~gsgnNwa~Gy~~~-G~~~~d~i~d~irk~~E~cD~l~gf~i~hSl~GGTGSGlgs~l~e~l~d~yp~~~~~~~~V  171 (244)
T d2btoa1          93 ISRTEGAGGNFAVGYLGA-GREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAV  171 (244)
T ss_dssp             EECSSCCTTCHHHHHTSH-HHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred             cccccccccchhhhcchh-HHHHHHHHHHHHHHHHHhCCCccceeEeeeeccccccchhhHHHHHHHHHhcCceEEEEEE
Confidence                11224455553332 23456899999999999999999999999999999 9999999999999999999999999


Q ss_pred             eCCCCCccchhhhhhhhhhhHhhhhhcccEEEEeeCCccccccCCCCCCCCCccccchhhHHHhhhhhhh
Q psy7545         144 IPPQTLESNFKLRNVNTALFFASLSELSDVFSPLSISSDCWNQTETYRKFPYMEYNVRECIMKELNNSAY  213 (235)
Q Consensus       144 ~p~~~~~~~~~~~~yN~~Lsl~~l~e~sd~~~pl~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~i~~~~~  213 (235)
                      +|++.. ++++++|||++|++++|.++||++++++|. .+.+.......++...|+..|.++|++-.+.+
T Consensus       172 ~P~~~~-~~~vvqpYNsiLsl~~L~e~sD~~~~~dN~-al~~i~~~~~~~~~~s~~~lN~~Ia~~ls~~T  239 (244)
T d2btoa1         172 LPSPQV-SSVVTEPYNTVFALNTLRRSADACLIFDNE-ALFDLAHRKWNIESPTVDDLNLLITEALAGIT  239 (244)
T ss_dssp             ECCCCS-SCEESHHHHHHHHHHHHHHTCSEEEEEEHH-HHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred             EecCCC-CcccccccHHHHHHHHHHhcCceEEEeehH-HHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhh
Confidence            998653 578899999999999999999999999994 34443334456777889999999998877654

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.87  E-value=0.0011  Score=53.57  Aligned_cols=85  Identities=14%  Similarity=0.171  Sum_probs=65.4

Q ss_pred             hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhh
Q psy7545          88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS  166 (235)
Q Consensus        88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~  166 (235)
                      .++-.+.|+..++.+|-   +.++.-++||| +|.+..+.+..+ ++. ...+++...|..   .+-..+..|+.-++..
T Consensus        86 a~e~~~~I~~~l~~~d~---vfi~AGlGGGTGsgaapvia~~ak-e~g-~lvv~ivtlPF~---~EG~~r~~~A~~~l~~  157 (209)
T d2vapa1          86 AKESAEEIKAAIQDSDM---VFITCGLGGGTGTGSAPVVAEISK-KIG-ALTVAVVTLPFV---MEGKVRMKNAMEGLER  157 (209)
T ss_dssp             HHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHHHHHH-HTT-CEEEEEEEECCG---GGCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCE---EEEEEeCCCCccccHHHHHHHHHH-HcC-CcEEEEEecchh---hhhHHHHHHHHHHHHH
Confidence            35556678888888774   68899999999 787666665555 444 455678889874   3445667899999999


Q ss_pred             hhhcccEEEEeeCC
Q psy7545         167 LSELSDVFSPLSIS  180 (235)
Q Consensus       167 l~e~sd~~~pl~~~  180 (235)
                      |.+++|.++.++|.
T Consensus       158 l~~~~d~~Ivi~Nd  171 (209)
T d2vapa1         158 LKQHTDTLVVIPNE  171 (209)
T ss_dssp             HHTTCSEEEEEEGG
T ss_pred             HHHhhcceEecccH
Confidence            99999999999995

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=96.75  E-value=0.0013  Score=52.52  Aligned_cols=85  Identities=14%  Similarity=0.086  Sum_probs=66.6

Q ss_pred             hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhh
Q psy7545          88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS  166 (235)
Q Consensus        88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~  166 (235)
                      .++..+.|++.++.+|-   +.++.-++||| +|.+..+.+..++ +. ....++...|..   .+-..+..|+.-++..
T Consensus        71 a~e~~~~I~~~l~~~d~---vfi~AGlGGgTGtgaapviA~~ake-~g-~lvv~ivtlPF~---~EG~~r~~~A~~gl~~  142 (194)
T d1w5fa1          71 ALESEEKIREVLQDTHM---VFITAGFGGGTGTGASPVIAKIAKE-MG-ILTVAIVTTPFY---FEGPERLKKAIEGLKK  142 (194)
T ss_dssp             HHHTHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHH-TT-CEEEEEEEECCG---GGCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCe---EEEEEecCCCcccchHHHHHHHHHH-cC-CceEEEEeechh---hhHHHHHHHHHHHHHH
Confidence            46667789999988875   58889999999 7877766665554 43 455677888874   3445567899999999


Q ss_pred             hhhcccEEEEeeCC
Q psy7545         167 LSELSDVFSPLSIS  180 (235)
Q Consensus       167 l~e~sd~~~pl~~~  180 (235)
                      |.+++|.++.++|.
T Consensus       143 L~~~~D~~Ivi~Nd  156 (194)
T d1w5fa1         143 LRKHVDTLIKISNN  156 (194)
T ss_dssp             HHHTCSEEEEEEHH
T ss_pred             HHHHhhhhheehHH
Confidence            99999999999995

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.69  E-value=0.0015  Score=52.34  Aligned_cols=85  Identities=14%  Similarity=0.078  Sum_probs=66.0

Q ss_pred             hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhh
Q psy7545          88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS  166 (235)
Q Consensus        88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~  166 (235)
                      .++-.+.|+..++.+|-   +.++.-++||| +|.+..+.+..++ + +...+++...|..   .+-..+.-++..++..
T Consensus        72 a~e~~~~I~~~l~~~d~---vfi~AGlGGGTGtgaapviA~~ake-~-g~lvvaivtlPF~---~EG~~r~~~A~~gl~~  143 (198)
T d1ofua1          72 ALEDRERISEVLEGADM---VFITTGMGGGTGTGAAPIIAEVAKE-M-GILTVAVVTRPFP---FEGRKRMQIADEGIRA  143 (198)
T ss_dssp             HHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHHHHHHH-T-TCEEEEEEEECCG---GGCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCe---EEEEecCCCCccccHHHHHHHHHHH-c-CCCEEEEEecchH---HHHHHHHHHHHHHHHH
Confidence            35667889999999986   58889999999 7877776666554 4 4466678889874   2334455688899999


Q ss_pred             hhhcccEEEEeeCC
Q psy7545         167 LSELSDVFSPLSIS  180 (235)
Q Consensus       167 l~e~sd~~~pl~~~  180 (235)
                      |.+++|.++.++|.
T Consensus       144 L~~~~d~~ivi~Nd  157 (198)
T d1ofua1         144 LAESVDSLITIPNE  157 (198)
T ss_dssp             HHTTCSEEEEEEHH
T ss_pred             HHHHCCEEEEEehh
Confidence            99999999999985

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.59  E-value=0.0015  Score=52.23  Aligned_cols=85  Identities=16%  Similarity=0.134  Sum_probs=65.4

Q ss_pred             hhhHHHHHHhhhhhcccccCeeEeeCCCCCC-chhhHhhhHHHHhhcCCcccceeeeeCCCCCccchhhhhhhhhhhHhh
Q psy7545          88 TEDWTDKVRSFVEECDCLQGFQILSDATGGF-GGLCASSLQHLKDEYSTKSCLVFPVIPPQTLESNFKLRNVNTALFFAS  166 (235)
Q Consensus        88 ~e~i~d~IRk~~E~CD~lqGF~i~~s~~GGt-sG~~s~lle~L~dey~k~~~~~~~v~p~~~~~~~~~~~~yN~~Lsl~~  166 (235)
                      .++..|.|+..++.+|-+   .++.-++||| +|.+..+.+..++ .+ ...+++...|..   .+-..+.-++--++..
T Consensus        72 a~e~~~~I~~~l~~~d~v---fi~AGlGGgTGtGaaPviA~iake-~g-~l~v~ivt~PF~---~EG~~r~~~A~~gl~~  143 (198)
T d1rq2a1          72 AEDAKDEIEELLRGADMV---FVTAGEGGGTGTGGAPVVASIARK-LG-ALTVGVVTRPFS---FEGKRRSNQAENGIAA  143 (198)
T ss_dssp             HHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-HT-CEEEEEEEECCG---GGCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCEE---EEEEecCCCCCcchHHHHHHHHHH-cC-CcEEEEEecChH---HHHHHHHHHHHHHHHH
Confidence            466778899999988874   8899999999 7877777765554 43 444577888874   2334556677789999


Q ss_pred             hhhcccEEEEeeCC
Q psy7545         167 LSELSDVFSPLSIS  180 (235)
Q Consensus       167 l~e~sd~~~pl~~~  180 (235)
                      |.+.+|.++.++|.
T Consensus       144 L~~~~D~~Ivi~Nd  157 (198)
T d1rq2a1         144 LRESCDTLIVIPND  157 (198)
T ss_dssp             HHHHCSEEEEEEHH
T ss_pred             HHHhhCeEEEechh
Confidence            99999999999985