Psyllid ID: psy7558

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------51
MCSPKSASSNTPDQSSRRHSSKNRLTFLRTFLIFVRVCFDSFINIIFSFIYKDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS
ccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccEEEccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccHHHHHHHHHHccccEEEccccccccccccEEEEEcc
cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHccEEEEEcHHHHHHHHHHHHHHHHccccccccccccccEEEEcccccccccccHHHHHHHcccccccHHHHHHHHHcccEEEEccccHHHccccccccccEEccccccccEccccccHHHHHHHHcccccEEEEEEcccccHHHHHHHccEEEEcccccEccccEEEEcccccccHHccccccccHHHHHHHHHHHHccccccccccccccccccEEEEEcHHHHcccccHHHHHHHHHHHHHHHHcccEEEEcccccccEEEEEEEEcccEEcEccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccEEEEEEEEHccccccEEcccccccccEEEEEEEEEc
mcspksassntpdqssrrhsskNRLTFLRTFLIFVRVCFDSFINIIFSFiykdeafplppvknkIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIAleedisdkpylgvpftskestackglsNTLGLLArkgkkadaDAYIVERVKTAggillgntnipellwsesrnmvygqsnnpynlcrttgassggeACLVSACGSvlglgtdlggsnripalycgvyghklttgsvnsrgiygrdgkegksmlaagpivkhaedllpyskclilpdklpaynfdksvdLAKLKVFyveepgdmkvspmSKDMIQAIRKCVNALkvvshsepedlshikQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIklplgmctiTFSSILKLIdmqlplpsdqwAKEHTEILKTKLTEllgdngvlvfpaapesapyhyatffrpynfTYWALFNIldfpvtnvpvgldgkglplgVQVIAS
mcspksassntpdqssrrhssknrLTFLRTFLIFVRVCFDSFINIIFSFIYKDEAFPLPPVKNKIVLESATQIAkkirnknitsVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKialeedisdkpYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERvktaggillgnTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYghklttgsvnsrGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVshsepedlshikqfRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLdgkglplgvqvias
MCSPKSASSNTPDQSSRRHSSKNRLTFLRTFLIFVRVCfdsfiniifsfiYKDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAkehteilktkltellGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS
************************LTFLRTFLIFVRVCFDSFINIIFSFIYKDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEA*****KIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGK*GKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPG*********DMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVI**
*************************TFLRTFLIFVRVCFDSFINIIFSFIYKD*******V*NKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS
*********************KNRLTFLRTFLIFVRVCFDSFINIIFSFIYKDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS
**********************NRLTFLRTFLIFVRVCFDSFINIIFSFIYKDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASS********ACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MCSPKSASSNTPDQSSRRHSSKNRLTFLRTFLIFVRVCFDSFINIIFSFIYKDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query508 2.2.26 [Sep-21-2011]
Q6GMR7532 Fatty-acid amide hydrolas yes N/A 0.879 0.840 0.378 1e-82
Q6DH69532 Fatty-acid amide hydrolas yes N/A 0.877 0.838 0.403 2e-81
Q05AM4526 Fatty-acid amide hydrolas no N/A 0.874 0.844 0.381 1e-73
B1L1G9485 Glutamyl-tRNA(Gln) amidot yes N/A 0.468 0.490 0.334 9e-30
C3KU97485 Glutamyl-tRNA(Gln) amidot yes N/A 0.468 0.490 0.330 2e-29
C1FLD9485 Glutamyl-tRNA(Gln) amidot yes N/A 0.468 0.490 0.330 2e-29
A5I6Z3485 Glutamyl-tRNA(Gln) amidot yes N/A 0.468 0.490 0.330 1e-28
A7FYL3485 Glutamyl-tRNA(Gln) amidot yes N/A 0.468 0.490 0.330 1e-28
B1INF7485 Glutamyl-tRNA(Gln) amidot yes N/A 0.468 0.490 0.330 1e-28
A7GIK2485 Glutamyl-tRNA(Gln) amidot yes N/A 0.468 0.490 0.330 2e-28
>sp|Q6GMR7|FAAH2_HUMAN Fatty-acid amide hydrolase 2 OS=Homo sapiens GN=FAAH2 PE=2 SV=1 Back     alignment and function desciption
 Score =  307 bits (786), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 176/465 (37%), Positives = 274/465 (58%), Gaps = 18/465 (3%)

Query: 60  PVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKA 119
           PV   ++L S  Q+AK IR + +  ++VVQA+I RI+ VNP +N +V  R+ EA++EA A
Sbjct: 43  PVTEPLLLLSGMQLAKLIRQRKVKCIDVVQAYINRIKDVNPMINGIVKYRFEEAMKEAHA 102

Query: 120 ADQKIALEED----ISDK-PYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVER 174
            DQK+A +++    + +K P+LGVP T KE+   +G+ N+ GL+ R+   A  DA +V  
Sbjct: 103 VDQKLAEKQEDEATLENKWPFLGVPLTVKEAFQLQGMPNSSGLMNRRDAIAKTDATVVAL 162

Query: 175 VKTAGGILLGNTNIPEL-LWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLG 233
           +K AG I LG TN  EL +W ES N +YG+SNNPY+L    G SSGGE C ++A  SV+G
Sbjct: 163 LKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHIVGGSSGGEGCTLAAACSVIG 222

Query: 234 LGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPY 293
           +G+D+GGS R+PA + G++GHK + G V ++G +       +  L  GP+ ++AEDL P 
Sbjct: 223 VGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQELFLCTGPMCRYAEDLAPM 282

Query: 294 SKCLILPDKLPAYNFDKSVDLAKLKVFYVE-EPGDMKVSPMSKDMIQAIRKCVNALKVVS 352
            K +  P  +     D  V L  LK +++E + G   +S + +D+I   +K V  L+ + 
Sbjct: 283 LKVMAGPG-IKRLKLDTKVHLKDLKFYWMEHDGGSFLMSKVDQDLIMTQKKVVVHLETIL 341

Query: 353 HSEPEDLSHIKQFRLGYDVWRYWVS------KEKDDFCKMLYDFKGEAVWWKELIKLPLG 406
            +  + +  +K+ +  + +W   +S      KE   F  +L D         ELIK  LG
Sbjct: 342 GASVQHVK-LKKMKYSFQLWIAMMSAKGHDGKEPVKFVDLLGDHGKHVSPLWELIKWCLG 400

Query: 407 MCTITFSSI-LKLIDMQLPLPSDQWAKEHT--EILKTKLTELLGDNGVLVFPAAPESAPY 463
           +   T  SI L L++ +L   ++++ K     E L+ +L ++LGD+GV ++P+ P  AP 
Sbjct: 401 LSVYTIPSIGLALLEEKLRYSNEKYQKFKAVEESLRKELVDMLGDDGVFLYPSHPTVAPK 460

Query: 464 HYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508
           H+    RP+NF Y  +F+ L  PVT  P+GL+ KGLPLG+QV+A 
Sbjct: 461 HHVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPLGIQVVAG 505
Degrades bioactive fatty acid amides like oleamide, the endogenous cannabinoid, anandamide and myristic amide to their corresponding acids, thereby serving to terminate the signaling functions of these molecules. Hydrolyzes monounsaturated substrate anandamide preferentially as compared to polyunsaturated substrates.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9EC: 9
>sp|Q6DH69|FAH2A_DANRE Fatty-acid amide hydrolase 2-A OS=Danio rerio GN=faah2a PE=2 SV=1 Back     alignment and function description
>sp|Q05AM4|FAH2B_DANRE Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1 Back     alignment and function description
>sp|B1L1G9|GATA_CLOBM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|C3KU97|GATA_CLOB6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|C1FLD9|GATA_CLOBJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|A5I6Z3|GATA_CLOBH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|A7FYL3|GATA_CLOB1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|B1INF7|GATA_CLOBK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Okra / Type B1) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|A7GIK2|GATA_CLOBL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gatA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
242007160520 amidotransferase subunit A, putative [Pe 0.946 0.925 0.472 1e-125
193700076552 PREDICTED: fatty-acid amide hydrolase 2- 0.964 0.887 0.456 1e-118
91088991537 PREDICTED: similar to CG5112 CG5112-PA [ 0.964 0.912 0.442 1e-118
332376927530 unknown [Dendroctonus ponderosae] 0.950 0.911 0.463 1e-116
328722970546 PREDICTED: fatty-acid amide hydrolase 2- 0.952 0.886 0.452 1e-114
380025252539 PREDICTED: fatty-acid amide hydrolase 2- 0.938 0.884 0.444 1e-114
328790282510 PREDICTED: fatty-acid amide hydrolase 2- 0.919 0.915 0.445 1e-111
332023100536 Fatty-acid amide hydrolase 2 [Acromyrmex 0.992 0.940 0.419 1e-109
383858864506 PREDICTED: fatty-acid amide hydrolase 2- 0.935 0.938 0.423 1e-109
158298478520 AGAP009617-PA [Anopheles gambiae str. PE 0.952 0.930 0.410 1e-107
>gi|242007160|ref|XP_002424410.1| amidotransferase subunit A, putative [Pediculus humanus corporis] gi|212507810|gb|EEB11672.1| amidotransferase subunit A, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/491 (47%), Positives = 325/491 (66%), Gaps = 10/491 (2%)

Query: 26  TFLRTFLIFVRVCFDSFINIIFSFIYKDEAFP--LPPVKNKIVLESATQIAKKIRNKNIT 83
           T L   L+F R  +D  ++ IF  +  D+     +PPVKN+IVLESAT +AKKIR K +T
Sbjct: 4   TILFQLLVFFRSLYDYAVDFIFGLMIYDDTKKKIIPPVKNRIVLESATSLAKKIREKELT 63

Query: 84  SVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDK-----PYLGV 138
           +  VV+AFIERIEQVNP +NA+VD R+  A++E++  D+ +    D  DK     P LG+
Sbjct: 64  AETVVRAFIERIEQVNPIINAVVDERFDLAIKESQEIDKYLKTTTDPIDKIEKNKPLLGI 123

Query: 139 PFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPEL-LWSESR 197
           PFT+KEST+CKGL+ T GLLARKG+K   DA +V  +K AGGILLG TN+PEL LW ESR
Sbjct: 124 PFTTKESTSCKGLNYTFGLLARKGEKGTEDAEVVRLMKEAGGILLGVTNMPELNLWCESR 183

Query: 198 NMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLT 257
           N +YGQ+ NP+N  RT G SSGGEA ++S CGS +G+GTD+GGS R+PA +CG++GHK T
Sbjct: 184 NNLYGQTLNPFNTTRTVGGSSGGEASIISVCGSPIGIGTDIGGSIRMPAFFCGIFGHKPT 243

Query: 258 TGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKL 317
           T +V+ +G   R G E  SM AAGP+ K+ EDL+   K + +   +    + + VD+  +
Sbjct: 244 TDAVSMKGTTRRTGNEKNSMAAAGPMAKYHEDLVSVLKVVSIHSSINETLY-QEVDMKTI 302

Query: 318 KVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVS 377
             +Y+EE  D +VS + +++ Q +R+ VN  + +S    +  +        Y +WRYW++
Sbjct: 303 NFYYMEELNDPRVSKVDEELTQILRRAVNYCQDISGVACKK-AKFHGLEYSYKLWRYWMT 361

Query: 378 KEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQWAKEHTEI 437
           KE   F   L + +     WKEL K  +G    T ++I KLID +LP  +  WA++ TE 
Sbjct: 362 KEPYQFEDELGNRERTVNLWKELPKKLIGKSEFTLAAIYKLIDHKLPQENSIWAEKLTEK 421

Query: 438 LKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGK 497
           LKT+   +L +NGVL+ P++P  APYHY  F RP+NFTYWALFNI  FPVT VP+GL+ +
Sbjct: 422 LKTEFNNILDNNGVLLCPSSPTPAPYHYTPFLRPFNFTYWALFNIFKFPVTQVPLGLNKE 481

Query: 498 GLPLGVQVIAS 508
           GLP+G+QV+A+
Sbjct: 482 GLPIGIQVVAA 492

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|193700076|ref|XP_001946922.1| PREDICTED: fatty-acid amide hydrolase 2-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|91088991|ref|XP_967443.1| PREDICTED: similar to CG5112 CG5112-PA [Tribolium castaneum] gi|270011545|gb|EFA07993.1| hypothetical protein TcasGA2_TC005582 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332376927|gb|AEE63603.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|328722970|ref|XP_003247718.1| PREDICTED: fatty-acid amide hydrolase 2-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|380025252|ref|XP_003696391.1| PREDICTED: fatty-acid amide hydrolase 2-like [Apis florea] Back     alignment and taxonomy information
>gi|328790282|ref|XP_001122981.2| PREDICTED: fatty-acid amide hydrolase 2-like [Apis mellifera] Back     alignment and taxonomy information
>gi|332023100|gb|EGI63361.1| Fatty-acid amide hydrolase 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|383858864|ref|XP_003704919.1| PREDICTED: fatty-acid amide hydrolase 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|158298478|ref|XP_318647.4| AGAP009617-PA [Anopheles gambiae str. PEST] gi|157013901|gb|EAA14577.4| AGAP009617-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query508
FB|FBgn0039341523 CG5112 [Drosophila melanogaste 0.858 0.833 0.412 6e-87
ZFIN|ZDB-GENE-040718-453532 faah2a "fatty acid amide hydro 0.872 0.832 0.402 1.6e-77
UNIPROTKB|Q6GMR7532 FAAH2 "Fatty-acid amide hydrol 0.875 0.836 0.376 1.2e-74
FB|FBgn0033717529 CG8839 [Drosophila melanogaste 0.893 0.858 0.366 4.6e-73
ZFIN|ZDB-GENE-061027-358526 faah2b "fatty acid amide hydro 0.872 0.842 0.376 1.4e-71
WB|WBGene00013164535 Y53F4B.18 [Caenorhabditis eleg 0.895 0.850 0.353 4.1e-65
FB|FBgn0038803552 CG5191 [Drosophila melanogaste 0.874 0.804 0.334 1.6e-61
FB|FBgn0037548536 CG7900 [Drosophila melanogaste 0.933 0.884 0.329 1.3e-59
FB|FBgn0037547530 CG7910 [Drosophila melanogaste 0.507 0.486 0.439 1.6e-57
UNIPROTKB|Q0C2J1454 HNE_1334 "Amidase family prote 0.539 0.603 0.356 3.1e-37
FB|FBgn0039341 CG5112 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 187/453 (41%), Positives = 281/453 (62%)

Query:    66 VLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIA 125
             + +SA ++A++IR +   S ++V+A+ ERIE VN  LNA+VD  + EAL++A+  D+K+ 
Sbjct:    49 ITKSAVELAQQIRERRQRSYDIVKAYCERIESVNRDLNAVVDGPFPEALDQAREIDRKLD 108

Query:   126 ----LEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGI 181
                  +ED+   P+LGVPF++K+STA  G  +TLGLLARK +++  DA  V  +K +G I
Sbjct:   109 EKEYSDEDLRRLPFLGVPFSTKDSTAVAGRLHTLGLLARKSERSTTDAECVRLMKESGAI 168

Query:   182 LLGNTNIPEL-LWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGG 240
             ++  +N+PE+  W ESRNM+ G +NNPY+L R+ G SSGGEA L++AC +  GLGTD+GG
Sbjct:   169 IIATSNVPEVNKWIESRNMLIGCTNNPYDLRRSVGGSSGGEAALIAACCTGFGLGTDIGG 228

Query:   241 SNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILP 300
             S RIPA  CG++GHK T+G+VN  G   R GKE  +M+ AGP+ + A DLLP  + L+ P
Sbjct:   229 SIRIPAFNCGIFGHKPTSGAVNMAGCTFRTGKEKDTMVCAGPMSRSARDLLPMMQVLVEP 288

Query:   301 DKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKD---MIQAIRKCVNAL--KVVSHSE 355
                     D+ VDL +L+ FYV   G  + +P++++   ++  IRK   A+  K V H+ 
Sbjct:   289 SLKAKLKLDQKVDLKRLRYFYVSSNGMAQCNPINRETERVMYKIRKHFEAVSGKDVRHA- 347

Query:   356 PEDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSI 415
               DL + K   L   +WRYW+++E  +F  +L     E   + EL K  LG    + ++I
Sbjct:   348 --DLPYTK---LTGKMWRYWMTQEPANF-NLLLGNGAELNPFVELFKKILGQSDYSMAAI 401

Query:   416 LKLIDMQLPLPSDQWAXXXXXXXXXXXXXXXGDNGVLVFPAAPESAPYHYATFFRPYNFT 475
               LID  LP   ++                 GD+GVL F ++P +AP+HY    +  +F 
Sbjct:   402 YGLIDSVLPKEKEKLMREATAKCKKSVQDLLGDDGVLFFHSSPRTAPFHYYPLVKFNDFA 461

Query:   476 YWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS 508
             Y++LFN+L  P T VP+GLD KG+PLG+QV+A+
Sbjct:   462 YFSLFNVLHLPATQVPMGLDSKGMPLGIQVVAN 494
GO:0017064 "fatty acid amide hydrolase activity" evidence=ISS
GO:0016884 "carbon-nitrogen ligase activity, with glutamine as amido-N-donor" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
ZFIN|ZDB-GENE-040718-453 faah2a "fatty acid amide hydrolase 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GMR7 FAAH2 "Fatty-acid amide hydrolase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0033717 CG8839 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061027-358 faah2b "fatty acid amide hydrolase 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00013164 Y53F4B.18 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0038803 CG5191 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0037548 CG7900 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0037547 CG7910 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C2J1 HNE_1334 "Amidase family protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3AKH0GATA_SYNSC6, ., 3, ., 5, ., -0.25370.82080.8492yesN/A
A6VWN0GATA_MARMS6, ., 3, ., 5, ., -0.25940.81690.8539yesN/A
B7K0I2GATA_CYAP86, ., 3, ., 5, ., -0.25880.82080.8651yesN/A
B9DWL8GATA_CLOK16, ., 3, ., 5, ., -0.23730.81490.8380yesN/A
Q5N0K5GATA_SYNP66, ., 3, ., 5, ., -0.25950.83460.8851yesN/A
B8J405GATA_DESDA6, ., 3, ., 5, ., -0.25910.83850.8765yesN/A
Q31LC2GATA_SYNE76, ., 3, ., 5, ., -0.25950.83460.8851yesN/A
B7KLL5GATA_CYAP76, ., 3, ., 5, ., -0.25360.82480.8674yesN/A
Q6GMR7FAAH2_HUMAN3, ., 5, ., 1, ., 9, 90.37840.87990.8402yesN/A
B0JSX3GATA_MICAN6, ., 3, ., 5, ., -0.24630.82080.8633yesN/A
Q6DH69FAH2A_DANRE3, ., 5, ., 1, ., 9, 90.40340.87790.8383yesN/A
Q60CK8GATA_METCA6, ., 3, ., 5, ., -0.26480.80900.8474yesN/A
Q8DK65GATA_THEEB6, ., 3, ., 5, ., -0.24620.83460.8796yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1.99LOW CONFIDENCE prediction!
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
pfam01425431 pfam01425, Amidase, Amidase 5e-72
COG0154475 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransf 7e-72
PRK06170490 PRK06170, PRK06170, amidase; Provisional 2e-57
PRK07487469 PRK07487, PRK07487, amidase; Provisional 9e-44
PRK07486484 PRK07486, PRK07486, amidase; Provisional 8e-42
PRK07488472 PRK07488, PRK07488, indole acetimide hydrolase; Va 2e-39
PRK00012459 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransf 3e-37
PRK12470462 PRK12470, PRK12470, amidase; Provisional 1e-35
TIGR00132460 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) a 7e-35
PRK06529482 PRK06529, PRK06529, amidase; Provisional 4e-33
PRK06169466 PRK06169, PRK06169, putative amidase; Provisional 5e-33
PRK09201465 PRK09201, PRK09201, amidase; Provisional 5e-33
PRK07042464 PRK07042, PRK07042, amidase; Provisional 1e-31
TIGR02715452 TIGR02715, amido_AtzE, amidohydrolase, AtzE family 1e-30
PRK06061483 PRK06061, PRK06061, amidase; Provisional 4e-27
PRK07869468 PRK07869, PRK07869, amidase; Provisional 2e-26
PRK08137497 PRK08137, PRK08137, amidase; Provisional 5e-25
PRK06565 566 PRK06565, PRK06565, amidase; Validated 1e-22
PRK07235502 PRK07235, PRK07235, amidase; Provisional 9e-18
PRK06707536 PRK06707, PRK06707, amidase; Provisional 2e-16
PRK07056454 PRK07056, PRK07056, amidase; Provisional 2e-16
PRK06102452 PRK06102, PRK06102, hypothetical protein; Provisio 1e-15
PRK06828491 PRK06828, PRK06828, amidase; Provisional 1e-15
PRK08186 600 PRK08186, PRK08186, allophanate hydrolase; Provisi 3e-15
TIGR02713 561 TIGR02713, allophanate_hyd, allophanate hydrolase 3e-14
PRK08310395 PRK08310, PRK08310, amidase; Provisional 2e-13
PRK05962424 PRK05962, PRK05962, amidase; Validated 3e-13
PRK11910615 PRK11910, PRK11910, amidase; Provisional 2e-12
PLN02722422 PLN02722, PLN02722, indole-3-acetamide amidohydrol 2e-12
PRK07139439 PRK07139, PRK07139, amidase; Provisional 2e-05
>gnl|CDD|216494 pfam01425, Amidase, Amidase Back     alignment and domain information 
 Score =  234 bits (600), Expect = 5e-72
 Identities = 124/445 (27%), Positives = 194/445 (43%), Gaps = 46/445 (10%)

Query: 86  EVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKES 145
           E+V+A+++R E  NP LNA V   + EAL +AKAAD++ A +E     P  GVP + K++
Sbjct: 1   ELVEAYLDRAEAANPKLNAFVTVFFEEALAQAKAADKRRARKEKG---PLHGVPISLKDN 57

Query: 146 TACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPEL-LWSESRNMVYGQS 204
              KG+  T G  A +G     DA +VER++ AG ++LG TN+ E  + S + N  +G +
Sbjct: 58  IDVKGVPTTAGSKALEGYPPPYDATVVERLRAAGAVILGKTNMDEFAMGSTTENSAFGPT 117

Query: 205 NNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSR 264
            NP++L RT G SSGG A  V+A    L +GTD GGS RIPA +CG+ G K T G V+  
Sbjct: 118 RNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPAAFCGLVGLKPTYGRVSRY 177

Query: 265 GIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKL---------PAYNFDKSVDLA 315
           G+         S+   GP+ +  ED       +   D           P +       L 
Sbjct: 178 GVVPY----SSSLDHVGPLARTVEDAALLLDVIAGYDPADPTSAPSPVPDFAEPLKKSLK 233

Query: 316 KLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALK----VVSHSEPEDLSHIKQFRLGYDV 371
            L++    E     + P   ++ +A+RK   AL+     V   EP  L H         +
Sbjct: 234 GLRIGVPREDFYFSLDP---EVQRAVRKAAAALEALGHEVVEVEPPSLKHA------LPL 284

Query: 372 WRYWVSKE--KDDFCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLIDMQLPLPSDQ 429
           +      E   +         +       + +K  + +     S+               
Sbjct: 285 YYIIAPAEASSNLSDLDELYPRIRDELLGDEVKRRIELGAYALSAGYSGA-------YYL 337

Query: 430 WAKEHTEILKTKLTELLGDNGVLVFPAAPESAP------YHYATFFRPYNFTYW-ALFNI 482
            A++   +L+ +   L  +  VL+ P  P  AP            +   +FT      N+
Sbjct: 338 KAQKVRRLLRREFAGLFEELDVLLSPTTPTPAPRLGEAADSPTVLYNLLDFTANTVPANL 397

Query: 483 LDFPVTNVPVGLDGKGLPLGVQVIA 507
              P  ++P G    GLP+G+Q+I 
Sbjct: 398 AGLPAISLPAGFSEDGLPVGLQIIG 422

Length = 431
>gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235723 PRK06170, PRK06170, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236029 PRK07487, PRK07487, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236030 PRK07488, PRK07488, indole acetimide hydrolase; Validated Back     alignment and domain information
>gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional Back     alignment and domain information
>gnl|CDD|232842 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit Back     alignment and domain information
>gnl|CDD|180608 PRK06529, PRK06529, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180437 PRK06169, PRK06169, putative amidase; Provisional Back     alignment and domain information
>gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235915 PRK07042, PRK07042, amidase; Provisional Back     alignment and domain information
>gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family Back     alignment and domain information
>gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional Back     alignment and domain information
>gnl|CDD|181154 PRK07869, PRK07869, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180626 PRK06565, PRK06565, amidase; Validated Back     alignment and domain information
>gnl|CDD|235979 PRK07235, PRK07235, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235855 PRK06707, PRK06707, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235921 PRK07056, PRK07056, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235698 PRK06102, PRK06102, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|180715 PRK06828, PRK06828, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236177 PRK08186, PRK08186, allophanate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|233981 TIGR02713, allophanate_hyd, allophanate hydrolase Back     alignment and domain information
>gnl|CDD|181375 PRK08310, PRK08310, amidase; Provisional Back     alignment and domain information
>gnl|CDD|168315 PRK05962, PRK05962, amidase; Validated Back     alignment and domain information
>gnl|CDD|183377 PRK11910, PRK11910, amidase; Provisional Back     alignment and domain information
>gnl|CDD|166363 PLN02722, PLN02722, indole-3-acetamide amidohydrolase Back     alignment and domain information
>gnl|CDD|235945 PRK07139, PRK07139, amidase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 508
PRK07487469 amidase; Provisional 100.0
PRK06170490 amidase; Provisional 100.0
COG0154475 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su 100.0
PRK06169466 putative amidase; Provisional 100.0
PRK07042464 amidase; Provisional 100.0
PRK07486484 amidase; Provisional 100.0
TIGR02715452 amido_AtzE amidohydrolase, AtzE family. Members of 100.0
PRK06102452 hypothetical protein; Provisional 100.0
PRK09201465 amidase; Provisional 100.0
PRK07488472 indole acetimide hydrolase; Validated 100.0
PRK07056454 amidase; Provisional 100.0
PRK00012459 gatA aspartyl/glutamyl-tRNA amidotransferase subun 100.0
TIGR00132460 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 100.0
PRK08137497 amidase; Provisional 100.0
PRK06529482 amidase; Provisional 100.0
PRK06061483 amidase; Provisional 100.0
PRK07869468 amidase; Provisional 100.0
PRK12470462 amidase; Provisional 100.0
PRK08186 600 allophanate hydrolase; Provisional 100.0
PF01425441 Amidase: Amidase; InterPro: IPR000120 Amidase sign 100.0
PRK05962424 amidase; Validated 100.0
PRK07235502 amidase; Provisional 100.0
PRK06828491 amidase; Provisional 100.0
PRK11910615 amidase; Provisional 100.0
KOG1212|consensus560 100.0
PRK06707536 amidase; Provisional 100.0
TIGR02713 561 allophanate_hyd allophanate hydrolase. Allophanate 100.0
PRK06565566 amidase; Validated 100.0
PRK07139439 amidase; Provisional 100.0
PRK08310395 amidase; Provisional 100.0
PLN02722422 indole-3-acetamide amidohydrolase 100.0
KOG1211|consensus506 100.0
KOG1212|consensus560 90.54
>PRK07487 amidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-96  Score=784.51  Aligned_cols=421  Identities=25%  Similarity=0.328  Sum_probs=354.6

Q ss_pred             hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEee
Q psy7558          64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSK  143 (508)
Q Consensus        64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vK  143 (508)
                      ++..+++.||+++|++|++|++||+++|++||+++|+.+|||+++++|+|+++|+++|+++++|+.  .||||||||+||
T Consensus         4 ~~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~~~~~g~~--~gpL~GvPi~vK   81 (469)
T PRK07487          4 ELWRLSAAELAAAVRSRDVSAREAAEAALARLDAVNPAINAVVDHRPEEALAQADAVDAARARGDD--PGPLAGVPVTVK   81 (469)
T ss_pred             hhhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHhHHHHhcCCC--CCCcCCCEEEEe
Confidence            467789999999999999999999999999999999999999999999999999999999998876  599999999999


Q ss_pred             cCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhH
Q psy7558         144 ESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEA  222 (508)
Q Consensus       144 D~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsa  222 (508)
                      |+|+|+|++||+||..++++++.+||++|+|||+||||++||||||||+ +.+|.|.+||+|+||||++|+|||||||||
T Consensus        82 D~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~~GGSSgGsA  161 (469)
T PRK07487         82 VNVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKAGAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGAA  161 (469)
T ss_pred             cccccCCCccCcchHHhcCCCCCCchHHHHHHHHCCCEEEEecChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHH
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCC-CCCCCceeecccCCCcchHHHHHHHhcCCC
Q psy7558         223 CLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDG-KEGKSMLAAGPIVKHAEDLLPYSKCLILPD  301 (508)
Q Consensus       223 aaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~-~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~  301 (508)
                      ||||+|++++|+|||||||||+||+||||||||||+|+||+.|+++... ....++|++|||||||+|+++++++|.|++
T Consensus       162 aAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~d  241 (469)
T PRK07487        162 AAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAPD  241 (469)
T ss_pred             HHHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999999999999999874221 112278999999999999999999999988


Q ss_pred             CCCCCCCCcc--CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecC-CCCchhhHHHHHHHHHHh
Q psy7558         302 KLPAYNFDKS--VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLS-HIKQFRLGYDVWRYWVSK  378 (508)
Q Consensus       302 ~~d~~~~~~~--~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v-~lp~~~~~~~~~~~~~~~  378 (508)
                      ..|+...+.+  .+.+++|||+..+++   ...++++++++++++++.|+++ |++|++ + ++|.+.+....|...+..
T Consensus       242 ~~d~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~  316 (469)
T PRK07487        242 PRDPWWVPAPLEGPPRPKRVALCVRPD---GLDVDPEVEAALRDAARRLEDA-GWTVEE-VDDTPPLREAAELQERLWLG  316 (469)
T ss_pred             CCCCccCCCCccCCCCCcEEEEECCCC---CCCCCHHHHHHHHHHHHHHHHC-CCEEEe-cCCCCchHHHHHHHHHHHHH
Confidence            7676543322  245789999997643   3568999999999999999995 999998 8 888776666655444332


Q ss_pred             hhhh-HHHHHhhcccchhhHHHHHhhhcCCCcchHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHHhcCCcEEEeC
Q psy7558         379 EKDD-FCKMLYDFKGEAVWWKELIKLPLGMCTITFSSILKLID--MQLPLPSDQWAKEHTEILKTKLTELLGDNGVLVFP  455 (508)
Q Consensus       379 ~~~~-~~~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~--~~~s~~~y~~a~~~r~~~~~~~~~~l~~~dvll~P  455 (508)
                      +... +..++              .. .+ .....+.+...++  ..++..+|.++++.|++++++|.++|+++|+||+|
T Consensus       317 e~~~~~~~~~--------------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~P  380 (469)
T PRK07487        317 DGYEALLAAA--------------EA-EG-DPGALAALRGQRAKARPLDLAGYMNALARRATLTRQWQLFFEDYPLLLMP  380 (469)
T ss_pred             HHHHHHHHHH--------------Hh-hc-hhhhhHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcC
Confidence            2110 11111              00 00 0011111111222  56789999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccccC--CC-----CchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558         456 AAPESAPYHYATFFR--PY-----NFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS  508 (508)
Q Consensus       456 t~p~~Ap~~~~~~~~--~~-----~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~  508 (508)
                      |+|++||+++.....  ..     ...+|.+||++|+|+++||+|++ +|||+||||||+
T Consensus       381 t~p~~a~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGlQlvg~  439 (469)
T PRK07487        381 VSAELPFPDDLDRQGAEGFRRVWEAQLPQIALPFMGLPGLSVPTGLV-GGVPVGVQLVAG  439 (469)
T ss_pred             CCCCCCCCCCCcCCchhhhhHHHHhhcccccccccCCCeEEEECccC-CCcceeEEEeCC
Confidence            999999988642111  00     11246789999999999999985 799999999985

>PRK06170 amidase; Provisional Back     alignment and domain information
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06169 putative amidase; Provisional Back     alignment and domain information
>PRK07042 amidase; Provisional Back     alignment and domain information
>PRK07486 amidase; Provisional Back     alignment and domain information
>TIGR02715 amido_AtzE amidohydrolase, AtzE family Back     alignment and domain information
>PRK06102 hypothetical protein; Provisional Back     alignment and domain information
>PRK09201 amidase; Provisional Back     alignment and domain information
>PRK07488 indole acetimide hydrolase; Validated Back     alignment and domain information
>PRK07056 amidase; Provisional Back     alignment and domain information
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit Back     alignment and domain information
>PRK08137 amidase; Provisional Back     alignment and domain information
>PRK06529 amidase; Provisional Back     alignment and domain information
>PRK06061 amidase; Provisional Back     alignment and domain information
>PRK07869 amidase; Provisional Back     alignment and domain information
>PRK12470 amidase; Provisional Back     alignment and domain information
>PRK08186 allophanate hydrolase; Provisional Back     alignment and domain information
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence Back     alignment and domain information
>PRK05962 amidase; Validated Back     alignment and domain information
>PRK07235 amidase; Provisional Back     alignment and domain information
>PRK06828 amidase; Provisional Back     alignment and domain information
>PRK11910 amidase; Provisional Back     alignment and domain information
>KOG1212|consensus Back     alignment and domain information
>PRK06707 amidase; Provisional Back     alignment and domain information
>TIGR02713 allophanate_hyd allophanate hydrolase Back     alignment and domain information
>PRK06565 amidase; Validated Back     alignment and domain information
>PRK07139 amidase; Provisional Back     alignment and domain information
>PRK08310 amidase; Provisional Back     alignment and domain information
>PLN02722 indole-3-acetamide amidohydrolase Back     alignment and domain information
>KOG1211|consensus Back     alignment and domain information
>KOG1212|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
3a2p_A493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 3e-20
3a2q_A493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 6e-20
3h0l_A478 Structure Of Trna-Dependent Amidotransferase Gatcab 2e-17
3kfu_E471 Crystal Structure Of The Transamidosome Length = 47 3e-17
1m21_A503 Crystal Structure Analysis Of The Peptide Amidase P 3e-16
2wap_A543 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 9e-15
2wj1_A573 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 1e-14
2vya_A587 Crystal Structure Of Fatty Acid Amide Hydrolase Con 1e-14
4hbp_A550 Crystal Structure Of Faah In Complex With Inhibitor 2e-14
1mt5_A537 Crystal Structure Of Fatty Acid Amide Hydrolase Len 2e-14
4do3_A571 Structure Of Faah With A Non-steroidal Anti-inflamm 3e-14
3qk5_A587 Crystal Structure Of Fatty Acid Amide Hydrolase Wit 4e-14
2dc0_A434 Crystal Structure Of Amidase Length = 434 6e-13
2df4_A485 Structure Of Trna-Dependent Amidotransferase Gatcab 7e-13
3al0_A475 Crystal Structure Of The Glutamine Transamidosome F 1e-12
2gi3_A476 Crystal Structure Of Glutamyl-Trna(Gln) Amidotransf 4e-11
4gyr_A 621 Granulibacter Bethesdensis Allophanate Hydrolase Ap 4e-08
3a1k_A521 Crystal Structure Of Rhodococcus Sp. N771 Amidase L 2e-07
3a1i_A521 Crystal Structure Of Rhodococcus Sp. N-771 Amidase 3e-07
>pdb|3A2P|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Length = 493 Back     alignment and structure 
Iteration: 1

 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 143/290 (49%), Gaps = 44/290 (15%)
Query: 68  ESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALE 127
           + AT  A+ +R+  I+  E+++A I  ++ VNP +NA++   + +A  E+          
Sbjct: 8   QDATAQAELVRSGEISRTELLEATIAHVQAVNPEINAVIIPLFEKARRES---------- 57
Query: 128 EDISDKPYLGVPFTSKESTAC-KGLSNTLGL--LARKGKKADADAYIVERVKTAGGILLG 184
            +++  P+ GVP+  K+ T   +G  NT  +  +   G +AD DAY V+R++ AG +LLG
Sbjct: 58  -ELASGPFAGVPYLLKDLTVVSQGDINTSSIKGMKESGYRADHDAYFVQRMRAAGFVLLG 116
Query: 185 NTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNR 243
            TN PE+     +    +G + NP+NL R+ G SSGG    V+A  S +  G D  GS R
Sbjct: 117 KTNTPEMGNQVTTEPEAWGATRNPWNLGRSVGGSSGGSGAAVAAALSPVAHGNDAAGSVR 176
Query: 244 IPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKL 303
           IPA  CGV G K T G ++                  GP+V  ++++   +   +     
Sbjct: 177 IPASVCGVVGLKPTRGRISP-----------------GPLVTDSDNVAGAAHEGL----- 214
Query: 304 PAYNFDKSV-DLAK-LKVFYVEEPGDMKVSPM-SKDMIQAIRKCVNALKV 350
               F +SV D+A  L V     PGD   +P  S+   Q I +   +L+V
Sbjct: 215 ----FARSVRDIAALLDVVSGHRPGDTFCAPTASRPYAQGISENPGSLRV 260
>pdb|3A2Q|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Complexed With Substrate Length = 493 Back     alignment and structure
>pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus Length = 478 Back     alignment and structure
>pdb|3KFU|E Chain E, Crystal Structure Of The Transamidosome Length = 471 Back     alignment and structure
>pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503 Back     alignment and structure
>pdb|2WAP|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With The Drug-Like Urea Inhibitor Pf-3845 Length = 543 Back     alignment and structure
>pdb|2WJ1|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With 7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One, An Alpha-Ketooxazole Length = 573 Back     alignment and structure
>pdb|2VYA|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated With The Drug-Like Inhibitor Pf-750 Length = 587 Back     alignment and structure
>pdb|4HBP|A Chain A, Crystal Structure Of Faah In Complex With Inhibitor Length = 550 Back     alignment and structure
>pdb|1MT5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Length = 537 Back     alignment and structure
>pdb|4DO3|A Chain A, Structure Of Faah With A Non-steroidal Anti-inflammatory Drug Length = 571 Back     alignment and structure
>pdb|3QK5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small Molecule Inhibitor Length = 587 Back     alignment and structure
>pdb|2DC0|A Chain A, Crystal Structure Of Amidase Length = 434 Back     alignment and structure
>pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Mn2+ Length = 485 Back     alignment and structure
>pdb|3AL0|A Chain A, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 475 Back     alignment and structure
>pdb|2GI3|A Chain A, Crystal Structure Of Glutamyl-Trna(Gln) Amidotransferase Subunit A (Tm1272) From Thermotoga Maritima At 1.80 A Resolution Length = 476 Back     alignment and structure
>pdb|4GYR|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase Apo Length = 621 Back     alignment and structure
>pdb|3A1K|A Chain A, Crystal Structure Of Rhodococcus Sp. N771 Amidase Length = 521 Back     alignment and structure
>pdb|3A1I|A Chain A, Crystal Structure Of Rhodococcus Sp. N-771 Amidase Complexed With Benzamide Length = 521 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query508
3ppm_A573 Fatty-acid amide hydrolase 1; protein-inhibitor co 1e-105
3a2q_A493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 2e-69
2dc0_A434 Probable amidase; structural genomics, NPPSFA, nat 2e-45
3ip4_A485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 4e-42
1o9p_A414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 2e-40
1o9p_A414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 5e-04
1m22_A503 Peptide amidase, PAM; eleven-stranded beta sheet, 3e-40
3h0l_A478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 3e-40
3kfu_E471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 4e-40
2gi3_A476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 7e-35
3a1k_A521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 5e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Length = 573 Back     alignment and structure
 Score =  325 bits (834), Expect = e-105
 Identities = 108/497 (21%), Positives = 189/497 (38%), Gaps = 65/497 (13%)

Query: 62  KNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAAD 121
              ++     Q+ +K+++  ++   V   ++ +  +VN   N +         + ++A  
Sbjct: 65  SEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPR 124

Query: 122 QKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGI 181
           Q              GVP + KE  + KG  +TLGL   +G  +++D  +V+ +K  G +
Sbjct: 125 QG----------LLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAV 174

Query: 182 LLGNTNIPE-LLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGG 240
              +TN+P+ +   +  N ++GQ+ NP+   ++ G SSGGE  L+ + GS LGLGTD+GG
Sbjct: 175 PFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGG 234

Query: 241 SNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILP 300
           S R P+ +CG+ G K T   ++  G+ G    +    L+ GP+ +  E L    K L+  
Sbjct: 235 SIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCE 294

Query: 301 DKLPA--------YNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALK--- 349
                        +  +       L+V Y E       SP    M +A+ +    L+   
Sbjct: 295 HLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSP---AMRRALIETKQRLEAAG 351

Query: 350 --VVSHSEP---EDLSHIKQFRLGYDVWRYWVSKEKDDFCKMLYDFKGEAVWWKELIKLP 404
             ++          L  +    L  D  R ++   K DF           +      K  
Sbjct: 352 HTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRL 411

Query: 405 LGMCTITFSSILK-LIDMQLPLPSDQWAKEHTEI--LKTKLTELLGDNGV--LVFPAAPE 459
           L +        L   ++   P  +++  K   EI   +  +        +  L+ P    
Sbjct: 412 LSLLLKPLFPRLAAFLNNMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLG- 470

Query: 460 SAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGL------------------------- 494
            A             +Y  L+N LDFP   VPV                           
Sbjct: 471 PALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILK 530

Query: 495 ----DGKGLPLGVQVIA 507
               +  GLP+ VQ +A
Sbjct: 531 KAMKNSVGLPVAVQCVA 547
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Length = 493 Back     alignment and structure
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434 Back     alignment and structure
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Length = 485 Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Length = 414 Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Length = 414 Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Length = 503 Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Length = 478 Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Length = 471 Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Length = 476 Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Length = 521 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
3ip4_A485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
2dc0_A434 Probable amidase; structural genomics, NPPSFA, nat 100.0
3h0l_A478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
3kfu_E471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 100.0
3a2q_A493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 100.0
1m22_A503 Peptide amidase, PAM; eleven-stranded beta sheet, 100.0
3ppm_A573 Fatty-acid amide hydrolase 1; protein-inhibitor co 100.0
2gi3_A476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 100.0
1o9p_A414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 100.0
3a1k_A521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 100.0
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Back     alignment and structure
Probab=100.00  E-value=9.6e-101  Score=818.08  Aligned_cols=432  Identities=24%  Similarity=0.327  Sum_probs=360.6

Q ss_pred             hhcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHH-HccCCCCCCCCCCcceEe
Q psy7558          64 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKI-ALEEDISDKPYLGVPFTS  142 (508)
Q Consensus        64 ~l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~-~~g~~l~~~PL~GvPi~v  142 (508)
                      ++..+|+++|+++|++|++|++||+++||+||+++|+.+|||+++++|+|+++|+++|+++ ++|+.   ||||||||+|
T Consensus         2 ~l~~~~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~~d~~~~~~g~~---gpL~GvPi~v   78 (485)
T 3ip4_A            2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMD---GKLFGIPMGI   78 (485)
T ss_dssp             CGGGCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHTTCCC---STTTTCEEEE
T ss_pred             CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHHHHHhcCCC---CCcCCCEEEE
Confidence            4778999999999999999999999999999999999999999999999999999999998 77765   9999999999


Q ss_pred             ecCcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhh
Q psy7558         143 KESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGE  221 (508)
Q Consensus       143 KD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGs  221 (508)
                      ||+|+++|++||+||..++++++.+||++|+|||+|||||+||||||||+ +++|.|++||+|+||||++|+||||||||
T Consensus        79 KD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n~~~G~t~NP~~~~~~pGGSSgGs  158 (485)
T 3ip4_A           79 KDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGS  158 (485)
T ss_dssp             ETTBCBTTBCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHH
T ss_pred             EcCcccCCCccCCCChhhcCCCCCCCcHHHHHHHHCCCEEEEecCCcccccCCCCCCCCCCCcCCccccCcCCCCCccHH
Confidence            99999999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHHHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCC
Q psy7558         222 ACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPD  301 (508)
Q Consensus       222 aaaVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~  301 (508)
                      ||+||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++    ++|++|||||||+|+++++++|+|+|
T Consensus       159 AaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~p~~~----sld~~Gp~aRsv~D~a~~l~vl~g~d  234 (485)
T 3ip4_A          159 AAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFAS----SLDQIGPLTRNVKDNAIVLEAISGAD  234 (485)
T ss_dssp             HHHHHTTSCSEEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCT----TTCCEEEEESSHHHHHHHHHHHBSCC
T ss_pred             HHHhhcCCCceeeeccCCcchhhhHHHhCCeeecCCCCcccCCCCCCccc----ccceeccccCCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999887    89999999999999999999999998


Q ss_pred             CCCCCCCCccC---------cCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHH
Q psy7558         302 KLPAYNFDKSV---------DLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVW  372 (508)
Q Consensus       302 ~~d~~~~~~~~---------~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~  372 (508)
                      +.|+.+.+.+.         +++++||||+.+.   +...++++++++++++++.|+++ |++|++ +++|.+++....|
T Consensus       235 ~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~~~---~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~p~~~~~~~~~  309 (485)
T 3ip4_A          235 VNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEY---LGEGVADDVKEAVQNAVETLKSL-GAVVEE-VSLPNTKFGIPSY  309 (485)
T ss_dssp             TTCTTSCCCCCCCCSTTTTCCCTTCEEEEEGGG---GSTTSCHHHHHHHHHHHHHHHHT-TCEEEE-ECCTTGGGHHHHH
T ss_pred             cccccccccCccchhhhhccCccCcEEEEECCc---ccCCCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCcHHHHHHHH
Confidence            87766543321         4688999999763   23578999999999999999995 999999 9999887777666


Q ss_pred             HHHHHhhhhh-HHHHHh---hc-ccchhhHHHHHhhhc--CCCcchHHHHHH-HHH--hCCChHHHHHHHHHHHHHHHHH
Q psy7558         373 RYWVSKEKDD-FCKMLY---DF-KGEAVWWKELIKLPL--GMCTITFSSILK-LID--MQLPLPSDQWAKEHTEILKTKL  442 (508)
Q Consensus       373 ~~~~~~~~~~-~~~~l~---~~-~~~~~~~~e~~~~~~--~~~~~~~~~~~~-l~~--~~~s~~~y~~a~~~r~~~~~~~  442 (508)
                      ..++..+... +..+..   .. ......+.+.+....  .........+.. ...  ......+|.++++.|.++++++
T Consensus       310 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~  389 (485)
T 3ip4_A          310 YVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDF  389 (485)
T ss_dssp             HHHHHHHHHHHTTTCSSSSSSCCCTTCCSHHHHHHHHHHHHSCHHHHHHHHHHHHHHSTTTTTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhhhccccccccccHHHHHHhhhhhhcCHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH
Confidence            5544432210 100000   00 001111222221110  111111111111 101  2233456899999999999999


Q ss_pred             HHHhcCCcEEEeCCCCCCCCCCCccccCC----CCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558         443 TELLGDNGVLVFPAAPESAPYHYATFFRP----YNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS  508 (508)
Q Consensus       443 ~~~l~~~dvll~Pt~p~~Ap~~~~~~~~~----~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~  508 (508)
                      .++|+++|+||+||+|.+||++++....+    ....||.+||++|+|+++||+|++ +|||+||||||+
T Consensus       390 ~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGlqlvg~  458 (485)
T 3ip4_A          390 DKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQS-NGRPIGLQFIGK  458 (485)
T ss_dssp             HHHHTTCSEEEEESSSSSCCBTTTSTTCHHHHHGGGTTTHHHHHHTCCEEEEEEEEE-TTEEEEEEEECS
T ss_pred             HHHHhcCCEEEeCCCCCCCCCcccccCChHHHhhhhhhhhhhHhhCCCeEEEeCCcC-CCCCEeEEEEcC
Confidence            99999999999999999999998643221    123489999999999999999996 999999999985
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 508
d2f2aa1485 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransf 7e-65
d2gi3a1475 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransf 3e-55
d1mt5a_537 c.117.1.1 (A:) Fatty acid amide hydrolase (oleamid 4e-45
d1m22a_490 c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomon 2e-42
d1ocka_412 c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium jap 5e-34
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

 Score =  216 bits (550), Expect = 7e-65
 Identities = 110/465 (23%), Positives = 186/465 (40%), Gaps = 32/465 (6%)

Query: 65  IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKI 124
           I  ES   +   I++K I   +VV+   + IE+ +P + + +      A+++A+  D+  
Sbjct: 3   IRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQ 62

Query: 125 ALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLG 184
           A  +D  D    G+P   K++    GL  T      +G     ++ ++E++     +L+G
Sbjct: 63  A--KDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIG 120

Query: 185 NTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNR 243
             N+ E      +    + ++ NP++     G SSGG A  V+A    L LG+D GGS R
Sbjct: 121 KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIR 180

Query: 244 IPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDL---------LPYS 294
            PA YCGV G K T G V+  G+         S+   GP+ ++ +D             +
Sbjct: 181 QPAAYCGVVGMKPTYGRVSRFGLVAF----ASSLDQIGPLTRNVKDNAIVLEAISGADVN 236

Query: 295 KCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHS 354
                P     +  +   D+  LKV   +E     V+    D+ +A++  V  LK +   
Sbjct: 237 DSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVAD---DVKEAVQNAVETLKSLGAV 293

Query: 355 -EPEDLSHIKQ-FRLGYDVWRYWVSKEKDDFCKMLYDFKG-EAVWWKELIKL--PLGMCT 409
            E   L + K      Y +     S     F  + Y +   EA   +EL K+    G   
Sbjct: 294 VEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGK 353

Query: 410 ITFSSILKLIDMQLPLPSDQWAKEHTEI---LKTKLTELLGDNGVLVFPAAPESAPYHYA 466
                I            D + K+  ++   +K    ++  +  V+V P AP +A     
Sbjct: 354 EVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGE 413

Query: 467 TFFRPY----NFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIA 507
               P     N       N+   P  +VP G    G P+G+Q I 
Sbjct: 414 EIDDPLTMYANDLLTTPVNLAGLPGISVPCGQS-NGRPIGLQFIG 457
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Length = 475 Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 537 Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490 Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Length = 412 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query508
d2f2aa1485 Glutamyl-tRNA(Gln) amidotransferase subunit A {Sta 100.0
d1mt5a_537 Fatty acid amide hydrolase (oleamide hydrolase) {R 100.0
d2gi3a1475 Glutamyl-tRNA(Gln) amidotransferase subunit A {The 100.0
d1m22a_490 Peptide amidase Pam {Stenotrophomonas maltophilia 100.0
d1ocka_412 Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 100.0
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.7e-96  Score=786.05  Aligned_cols=432  Identities=24%  Similarity=0.332  Sum_probs=365.0

Q ss_pred             hcccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCcccEEEecChHHHHHHHHHHhHHHHccCCCCCCCCCCcceEeec
Q psy7558          65 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKE  144 (508)
Q Consensus        65 l~~~sa~~l~~~i~~g~~t~~evv~a~l~ri~~~n~~lna~~~~~~~~Al~~A~~~D~~~~~g~~l~~~PL~GvPi~vKD  144 (508)
                      |...|+.||+++|++|++|++||+++||+||+++|+.+|||+++++|+|+++|+++|+++++|+.  +||||||||+|||
T Consensus         3 ~~~~s~~~l~~~~~~~~~s~~e~~~~~l~ri~~~~~~lna~~~~~~~~a~~~A~~~d~~~~~~~~--~gpL~GiPi~vKD   80 (485)
T d2f2aa1           3 IRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQM--DGKLFGIPMGIKD   80 (485)
T ss_dssp             STTCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHTTCC--CSTTTTCEEEEET
T ss_pred             CcHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCccEEEEeCHHHHHHHHHHHHHHHHCCCC--CCCcCcCeEEEEc
Confidence            56789999999999999999999999999999999999999999999999999999999999987  5999999999999


Q ss_pred             CcCCCCcccccccccccCCCCCCcHHHHHHHHHcCCeEEEEeCccccC-CCCCCCCCCCCCCCCCCCCCCCCCCChhhHH
Q psy7558         145 STACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEAC  223 (508)
Q Consensus       145 ~~~v~G~~tt~Gs~~~~~~~~~~da~~V~rLr~aGAIilgkTn~~E~~-~~~t~n~~~G~t~NP~d~~~t~GGSSgGsaa  223 (508)
                      +|+|+|++||+||..+++.++.+|+++|++||++|||++||||||||+ +.++.|.+||+|+||||++|+||||||||||
T Consensus        81 ~~~v~g~~tt~Gs~~~~~~~~~~d~~~v~~l~~~Gai~~gkt~~~e~~~~~~~~n~~~g~~~NP~~~~~~~GGSSgGsaa  160 (485)
T d2f2aa1          81 NIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAA  160 (485)
T ss_dssp             TBCBTTBCCCTTCGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHH
T ss_pred             ccccCCCccCCcChhhccCCccccccccccccccccccccccchhhhcccccccCccccCcCCCCCcccccCCccccchh
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             HHhcCCCccccccccccccchhhhccCcccccCCCCcccCCCCCCCCCCCCCCceeecccCCCcchHHHHHHHhcCCCCC
Q psy7558         224 LVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKL  303 (508)
Q Consensus       224 aVAag~~~~aiGsD~gGSIRiPAa~cGv~G~KPT~G~vs~~G~~p~~~~~~~~~~~~GpmaR~v~Dl~~ll~vl~g~~~~  303 (508)
                      +||+|++++|+|||||||||+||+||||||||||+|+||++|++|+++    ++|++|||||+|+|+++++++|.|.+..
T Consensus       161 avA~g~~~~alGtDt~GSiR~PAa~~Gl~G~kPt~G~is~~g~~~~~~----~~d~~Gpmar~v~D~~~ll~~~~g~~~~  236 (485)
T d2f2aa1         161 AVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFAS----SLDQIGPLTRNVKDNAIVLEAISGADVN  236 (485)
T ss_dssp             HHHTTSCSCEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCT----TTCCEEEEESSHHHHHHHHHHHBSCBTT
T ss_pred             hHHhccCceEEecCCCchhhhhHHHhCceeecCCCCCCCCCCCCCCcc----cCCeeccccCCHHHHHHHHhhccccccc
Confidence            999999999999999999999999999999999999999999999987    9999999999999999999999999887


Q ss_pred             CCCCCCcc---------CcCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeeeecCCCCchhhHHHHHHH
Q psy7558         304 PAYNFDKS---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRY  374 (508)
Q Consensus       304 d~~~~~~~---------~~~~~lrIg~~~~~g~~~~~~v~~~v~~a~~~av~~L~~~lG~~V~~~v~lp~~~~~~~~~~~  374 (508)
                      |+.+.+.+         .+++++||||+.++.   ...++++++++++++++.|+++ |++|++ +++|.+......|..
T Consensus       237 d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~i~~a~~~a~~~L~~~-G~~v~e-v~lp~~~~~~~~~~~  311 (485)
T d2f2aa1         237 DSTSAPVDDVDFTSEIGKDIKGLKVALPKEYL---GEGVADDVKEAVQNAVETLKSL-GAVVEE-VSLPNTKFGIPSYYV  311 (485)
T ss_dssp             BTTSCCCCCCCCSTTTTCCCTTCEEEEEGGGG---STTSCHHHHHHHHHHHHHHHHT-TCEEEE-ECCTTGGGHHHHHHH
T ss_pred             ccccCCCCccchhhhhcCCccCCEEEEEcccc---cCcCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCchhhhHHHHHH
Confidence            66554322         246899999997653   5678999999999999999995 999999 999988776666644


Q ss_pred             HHHhhhhh-HHHHH---hh-cccchhhHHHHHhhhcC--CCcchHHHHHH-HHH--hCCChHHHHHHHHHHHHHHHHHHH
Q psy7558         375 WVSKEKDD-FCKML---YD-FKGEAVWWKELIKLPLG--MCTITFSSILK-LID--MQLPLPSDQWAKEHTEILKTKLTE  444 (508)
Q Consensus       375 ~~~~~~~~-~~~~l---~~-~~~~~~~~~e~~~~~~~--~~~~~~~~~~~-l~~--~~~s~~~y~~a~~~r~~~~~~~~~  444 (508)
                      ....+... +..+.   .. .......+.++.+....  ........+.. ...  ..+....|.++++.+..+++++++
T Consensus       312 ~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~  391 (485)
T d2f2aa1         312 IASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDK  391 (485)
T ss_dssp             HHHHHHHHHTTTCSSSSSSCCCSSCCSHHHHHHHHHHHHSCHHHHHHHHHHHHHHSTTTTTTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhhhccccccccCHHHHHHHhhhhhcCHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence            43322110 11000   00 00111122222221110  11111122211 111  556677889999999999999999


Q ss_pred             HhcCCcEEEeCCCCCCCCCCCccccCC----CCchhhHHhhhhcCcceeEcccCCCCCCCeeEEEEcC
Q psy7558         445 LLGDNGVLVFPAAPESAPYHYATFFRP----YNFTYWALFNILDFPVTNVPVGLDGKGLPLGVQVIAS  508 (508)
Q Consensus       445 ~l~~~dvll~Pt~p~~Ap~~~~~~~~~----~~~~yt~l~N~lG~PaisvP~G~~~~GLPvGvQlvg~  508 (508)
                      +|+++|+||+||++.+||++++....+    .+..||.+||++|+|+++||+|+ .+|||+||||||+
T Consensus       392 ~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~G~-~dGlPvGlQiig~  458 (485)
T d2f2aa1         392 VFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQ-SNGRPIGLQFIGK  458 (485)
T ss_dssp             HTTTCSEEEEESSSSSCCBTTTSTTCHHHHHGGGTTTHHHHHHTCCEEEEEEEE-ETTEEEEEEEECS
T ss_pred             HHccCCEEEeCCCCCCCCCcccccCCHHHHhhhhHHHHHHHHHCCCeEEEECCC-CCCCCEeEEEECC
Confidence            999999999999999999998754322    23458999999999999999997 7999999999985
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure