Psyllid ID: psy7560

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------
MLKILCSLCRMVPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTAGTVTGVRLDSIPEQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMTGFGDGQRWFKGIRRVMTDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFFSDHY
cHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccHHHHHHHHccccEEEEcccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccccccccccHHHHHcHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHccccccccccccccccEEcccccccccccccccccccccccccHHHHHHHHHccccEEEccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccccccccc
cHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccHHHccccccEEEEEEEEHccccccEccccccccccccccEEEEEcccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHHHHccccccccccccccEEEEHccccccccccHHHHHHHcccccccHHHHHHHHHcccEEEEccccHHHccccccccccEEccccccccEccccccHHHHHHHHcccccEEEEEEcccccHHHHHHHccEEEEcccccEccccEEEEcHHHHHcHHccccccccHHHHHHHHHHHHccccccccccccccccccEEEEEcHHHHcccccHHHHHHHHHHHHHHHHHHHcccEEEHcccccccHHHHHHHHHHHcHHHHHccccccc
mlkilcslcrmvpsdqwAKEHTEILKTKLTEllgdngvlvfpaapesapyhyatffrpynfTYWALFNIldfpvtnvpvgldgkglplgdrvffstagtvtgvrldsipeQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMtgfgdgqrwFKGIRrvmtdeafplppvknkIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIAleedisdkpylgvpftskestackglsNTLGLLArkgkkadaDAYIVERVKTAggillgntnipellwsesrnmvygqsnnpynlcrttgassggeACLVSACGSvlglgtdlggsnripalycgvyghklttgsvnsrgiygrdgkegksmlaagpivkhaedllpyskclilpdklpaynfdksvdLAKLKVFyveepgdmkvspmSKDMIQAIRKCVNALkvvshsepedlshikQFRLGYDVWRYWVSkekddffsdhy
mlkilcslcrmvpsdqwAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTagtvtgvrldsipeqarRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVmtgfgdgqrwFKGIRRVMTDeafplppvknkiVLESATQIAkkirnknitsVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKialeedisdkpYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERvktaggillgnTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYghklttgsvnsrGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVshsepedlshikqfRLGYDVWRYWVSKEKDDFFSDHY
MLKILCSLCRMVPSDQWAkehteilktkltellGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTAGTVTGVRLDSIPEQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMTGFGDGQRWFKGIRRVMTDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFFSDHY
**KILCSLCRMVPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTAGTVTGVRLDSIPEQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMTGFGDGQRWFKGIRRVMTDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEA*****KIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGK*GKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPG*********DMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSK**********
MLKI***LCRMVPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTAGTVTGVRLDSIPEQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMTGFGDGQRWFKGIR***************KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEK********
MLKILCSLCRMVPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTAGTVTGVRLDSIPEQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMTGFGDGQRWFKGIRRVMTDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFFSDHY
MLKILCSLCRMVPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTAGTVTGVRLDSIPEQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMTGFGDGQRWFKGIRRVMTDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEA****ACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDD******
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MLKILCSLCRMVPSDQWAKEHTEILKTKLTELLGDNGVLVFPAAPESAPYHYATFFRPYNFTYWALFNILDFPVTNVPVGLDGKGLPLGDRVFFSTAGTVTGVRLDSIPEQARRFFWSKKCEDALRGMCLRSFWETLFSSFSKRWFKGIRRVMTGFGDGQRWFKGIRRVMTDEAFPLPPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELLWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWRYWVSKEKDDFFSDHY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query507 2.2.26 [Sep-21-2011]
Q6DH69 532 Fatty-acid amide hydrolas yes N/A 0.698 0.665 0.387 1e-57
Q6GMR7 532 Fatty-acid amide hydrolas yes N/A 0.633 0.603 0.375 1e-57
Q05AM4 526 Fatty-acid amide hydrolas no N/A 0.633 0.610 0.383 2e-50
B1L1G9 485 Glutamyl-tRNA(Gln) amidot yes N/A 0.469 0.490 0.334 8e-30
C1FLD9 485 Glutamyl-tRNA(Gln) amidot yes N/A 0.469 0.490 0.330 2e-29
C3KU97 485 Glutamyl-tRNA(Gln) amidot yes N/A 0.469 0.490 0.330 2e-29
B1INF7 485 Glutamyl-tRNA(Gln) amidot yes N/A 0.469 0.490 0.330 9e-29
A5I6Z3 485 Glutamyl-tRNA(Gln) amidot yes N/A 0.469 0.490 0.330 1e-28
A7FYL3 485 Glutamyl-tRNA(Gln) amidot yes N/A 0.469 0.490 0.330 1e-28
A7GIK2 485 Glutamyl-tRNA(Gln) amidot yes N/A 0.469 0.490 0.330 2e-28
>sp|Q6DH69|FAH2A_DANRE Fatty-acid amide hydrolase 2-A OS=Danio rerio GN=faah2a PE=2 SV=1 Back     alignment and function desciption
 Score =  224 bits (572), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/377 (38%), Positives = 212/377 (56%), Gaps = 23/377 (6%)

Query: 136 TLFSSFSKRWFKGIRRVMTG----FGDGQRWFKGIRRVMTDEAFPLPPVKNKIVLESATQ 191
           T F  F  R  + +  ++      F   QR   G+ R        LPP+ N ++L SA Q
Sbjct: 4   TRFERFLGRLLRAVVWILFAAFKLFAPQQR--HGVSR--------LPPITNPLLLLSAMQ 53

Query: 192 IAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALE---ED 248
           +A+KIR K +TSVEVVQA+I+RI++VNP +NAMV  R++ AL+EA   D+ I  E   ED
Sbjct: 54  LARKIRRKEVTSVEVVQAYIDRIQEVNPLINAMVKDRFSAALQEAAQVDKLIEEETGGED 113

Query: 249 ISDK--PYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTN 306
           + +   P LGVP T KE+ A +G+ N+ GLL R+   + ADA  V  +K AG I LG TN
Sbjct: 114 VLEDRLPLLGVPITVKEAFALQGMPNSTGLLTRRDLVSGADAPSVALLKRAGAIPLGVTN 173

Query: 307 IPEL-LWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPA 365
             EL +W ES N +YG +NNPY+  R  G SSGGE  ++ A  SV+G+G+D+GGS RIP 
Sbjct: 174 CSELCMWLESHNHLYGITNNPYDFERIVGGSSGGEGSILGAGSSVIGIGSDIGGSIRIPC 233

Query: 366 LYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPAY 425
            + G++GHK + G VN+ G Y     +    L  GP+ ++AEDL+P    +  P+     
Sbjct: 234 FFNGIFGHKPSVGIVNNEGQYPPASGQQMGFLCTGPMCRYAEDLIPMLSIMGGPNAEKLS 293

Query: 426 NFDKSVDLAKLKVFYV-EEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQF 484
            F + VDL KL+ F V    G   VSP+   ++ A +  V  L+     + ++L  I Q 
Sbjct: 294 LFTE-VDLKKLRFFSVPHNGGSHLVSPVEPQLLHAQKMVVKRLEADLGVKVQELL-IPQL 351

Query: 485 RLGYDVWRYWVSKEKDD 501
           +  + +W   ++    D
Sbjct: 352 KYSFQIWGTMMASPGKD 368

Danio rerio (taxid: 7955)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9EC: 9
>sp|Q6GMR7|FAAH2_HUMAN Fatty-acid amide hydrolase 2 OS=Homo sapiens GN=FAAH2 PE=2 SV=1 Back     alignment and function description
>sp|Q05AM4|FAH2B_DANRE Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1 Back     alignment and function description
>sp|B1L1G9|GATA_CLOBM Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|C1FLD9|GATA_CLOBJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|C3KU97|GATA_CLOB6 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|B1INF7|GATA_CLOBK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Okra / Type B1) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|A5I6Z3|GATA_CLOBH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|A7FYL3|GATA_CLOB1 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|A7GIK2|GATA_CLOBL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gatA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
91088991537 PREDICTED: similar to CG5112 CG5112-PA [ 0.637 0.601 0.490 6e-87
332376927530 unknown [Dendroctonus ponderosae] 0.644 0.616 0.491 3e-86
193700076552 PREDICTED: fatty-acid amide hydrolase 2- 0.641 0.588 0.491 9e-85
242007160520 amidotransferase subunit A, putative [Pe 0.639 0.623 0.484 8e-83
328722970546 PREDICTED: fatty-acid amide hydrolase 2- 0.629 0.584 0.485 6e-81
383858864506 PREDICTED: fatty-acid amide hydrolase 2- 0.637 0.638 0.450 2e-75
157115291542 amidase [Aedes aegypti] gi|108883507|gb| 0.660 0.618 0.429 4e-75
158298478520 AGAP009617-PA [Anopheles gambiae str. PE 0.633 0.617 0.425 1e-74
380025252539 PREDICTED: fatty-acid amide hydrolase 2- 0.637 0.599 0.447 4e-74
328790282510 PREDICTED: fatty-acid amide hydrolase 2- 0.637 0.633 0.444 6e-74
>gi|91088991|ref|XP_967443.1| PREDICTED: similar to CG5112 CG5112-PA [Tribolium castaneum] gi|270011545|gb|EFA07993.1| hypothetical protein TcasGA2_TC005582 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  328 bits (840), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 163/332 (49%), Positives = 235/332 (70%), Gaps = 9/332 (2%)

Query: 178 PPVKNKIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAK 237
           PP  +KIVLESAT +A+KIR + + S EVV+AFI+R+ QVN  LN++VD R+ EA+E+A+
Sbjct: 61  PP--SKIVLESATSLARKIRKRELKSEEVVRAFIDRVHQVNKLLNSVVDERFDEAIEDAQ 118

Query: 238 AADQKIA----LEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVER 293
             D+ IA     E+D   KP+LG+PFT+KESTACKGLSNT GLL R+ +KA  DA +V+ 
Sbjct: 119 NLDKDIADGKITEKDFDKKPFLGIPFTTKESTACKGLSNTFGLLNRRLQKAAFDAQVVQE 178

Query: 294 VKTAGGILLGNTNIPEL-LWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLG 352
           +K AGGIL+G TN+P+L LW E+ N VYG +NNPYN  R  G SSGGEA +++ACGS +G
Sbjct: 179 MKNAGGILIGVTNVPQLNLWQETFNPVYGVTNNPYNTTRNVGGSSGGEASIIAACGSPIG 238

Query: 353 LGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPY 412
           +GTD+GGS RIPA  CGV+ HK T+G +++ G+  R GKE ++M+  GP+ K++EDL P+
Sbjct: 239 IGTDIGGSLRIPAFMCGVFAHKPTSGLISTHGLTFRTGKEQETMVVVGPMAKYSEDLTPF 298

Query: 413 SKCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSH 472
            K L L +       D+SVD+AK++V+YV +P D  VSP   +M +A+ K +     +  
Sbjct: 299 LKVL-LGENSAKLKLDQSVDVAKIRVYYVTDPKDPFVSPFRDEMNKAMLKVIRHFAEILP 357

Query: 473 SEPEDLSHIKQFRLGYDVWRYWVSKEKDDFFS 504
            +PE + +I++ + G  +WRYW+++E +  F+
Sbjct: 358 EKPE-MVNIQELKYGGKLWRYWMTQEPNTNFN 388

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332376927|gb|AEE63603.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|193700076|ref|XP_001946922.1| PREDICTED: fatty-acid amide hydrolase 2-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242007160|ref|XP_002424410.1| amidotransferase subunit A, putative [Pediculus humanus corporis] gi|212507810|gb|EEB11672.1| amidotransferase subunit A, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|328722970|ref|XP_003247718.1| PREDICTED: fatty-acid amide hydrolase 2-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|383858864|ref|XP_003704919.1| PREDICTED: fatty-acid amide hydrolase 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|157115291|ref|XP_001658184.1| amidase [Aedes aegypti] gi|108883507|gb|EAT47732.1| AAEL001173-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|158298478|ref|XP_318647.4| AGAP009617-PA [Anopheles gambiae str. PEST] gi|157013901|gb|EAA14577.4| AGAP009617-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|380025252|ref|XP_003696391.1| PREDICTED: fatty-acid amide hydrolase 2-like [Apis florea] Back     alignment and taxonomy information
>gi|328790282|ref|XP_001122981.2| PREDICTED: fatty-acid amide hydrolase 2-like [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query507
FB|FBgn0039341 523 CG5112 [Drosophila melanogaste 0.615 0.596 0.432 1.5e-65
ZFIN|ZDB-GENE-040718-453 532 faah2a "fatty acid amide hydro 0.613 0.584 0.425 7.3e-59
FB|FBgn0033717 529 CG8839 [Drosophila melanogaste 0.619 0.593 0.390 3.3e-56
UNIPROTKB|Q6GMR7 532 FAAH2 "Fatty-acid amide hydrol 0.633 0.603 0.381 2.9e-55
ZFIN|ZDB-GENE-061027-358 526 faah2b "fatty acid amide hydro 0.631 0.608 0.386 1.5e-53
FB|FBgn0038803 552 CG5191 [Drosophila melanogaste 0.644 0.592 0.362 5.1e-51
WB|WBGene00013164 535 Y53F4B.18 [Caenorhabditis eleg 0.581 0.551 0.393 5.2e-49
FB|FBgn0037547 530 CG7910 [Drosophila melanogaste 0.508 0.486 0.439 2.6e-47
FB|FBgn0037548 536 CG7900 [Drosophila melanogaste 0.577 0.546 0.374 8.8e-47
UNIPROTKB|Q0C2J1 454 HNE_1334 "Amidase family prote 0.540 0.603 0.356 4.1e-33
FB|FBgn0039341 CG5112 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 142/328 (43%), Positives = 214/328 (65%)

Query:   185 VLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIA 244
             + +SA ++A++IR +   S ++V+A+ ERIE VN  LNA+VD  + EAL++A+  D+K+ 
Sbjct:    49 ITKSAVELAQQIRERRQRSYDIVKAYCERIESVNRDLNAVVDGPFPEALDQAREIDRKLD 108

Query:   245 ----LEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGI 300
                  +ED+   P+LGVPF++K+STA  G  +TLGLLARK +++  DA  V  +K +G I
Sbjct:   109 EKEYSDEDLRRLPFLGVPFSTKDSTAVAGRLHTLGLLARKSERSTTDAECVRLMKESGAI 168

Query:   301 LLGNTNIPEL-LWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGG 359
             ++  +N+PE+  W ESRNM+ G +NNPY+L R+ G SSGGEA L++AC +  GLGTD+GG
Sbjct:   169 IIATSNVPEVNKWIESRNMLIGCTNNPYDLRRSVGGSSGGEAALIAACCTGFGLGTDIGG 228

Query:   360 SNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILP 419
             S RIPA  CG++GHK T+G+VN  G   R GKE  +M+ AGP+ + A DLLP  + L+ P
Sbjct:   229 SIRIPAFNCGIFGHKPTSGAVNMAGCTFRTGKEKDTMVCAGPMSRSARDLLPMMQVLVEP 288

Query:   420 DKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKD---MIQAIRKCVNAL--KVVSHSE 474
                     D+ VDL +L+ FYV   G  + +P++++   ++  IRK   A+  K V H+ 
Sbjct:   289 SLKAKLKLDQKVDLKRLRYFYVSSNGMAQCNPINRETERVMYKIRKHFEAVSGKDVRHA- 347

Query:   475 PEDLSHIKQFRLGYDVWRYWVSKEKDDF 502
               DL + K   L   +WRYW+++E  +F
Sbjct:   348 --DLPYTK---LTGKMWRYWMTQEPANF 370
GO:0017064 "fatty acid amide hydrolase activity" evidence=ISS
GO:0016884 "carbon-nitrogen ligase activity, with glutamine as amido-N-donor" evidence=IEA
GO:0005811 "lipid particle" evidence=IDA
ZFIN|ZDB-GENE-040718-453 faah2a "fatty acid amide hydrolase 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0033717 CG8839 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GMR7 FAAH2 "Fatty-acid amide hydrolase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061027-358 faah2b "fatty acid amide hydrolase 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0038803 CG5191 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00013164 Y53F4B.18 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0037547 CG7910 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0037548 CG7900 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C2J1 HNE_1334 "Amidase family protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6GMR7FAAH2_HUMAN3, ., 5, ., 1, ., 9, 90.37570.63310.6033yesN/A
Q6DH69FAH2A_DANRE3, ., 5, ., 1, ., 9, 90.38720.69820.6654yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1.99LOW CONFIDENCE prediction!
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
pfam01425 431 pfam01425, Amidase, Amidase 1e-61
COG0154 475 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransf 9e-59
PRK06170 490 PRK06170, PRK06170, amidase; Provisional 2e-56
PRK07487 469 PRK07487, PRK07487, amidase; Provisional 8e-43
PRK07486 484 PRK07486, PRK07486, amidase; Provisional 5e-41
PRK07488 472 PRK07488, PRK07488, indole acetimide hydrolase; Va 5e-39
PRK00012 459 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransf 2e-37
TIGR00132 460 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) a 2e-35
PRK12470 462 PRK12470, PRK12470, amidase; Provisional 5e-35
PRK06529 482 PRK06529, PRK06529, amidase; Provisional 2e-33
PRK09201 465 PRK09201, PRK09201, amidase; Provisional 1e-32
PRK06169 466 PRK06169, PRK06169, putative amidase; Provisional 2e-32
PRK07042 464 PRK07042, PRK07042, amidase; Provisional 4e-31
TIGR02715 452 TIGR02715, amido_AtzE, amidohydrolase, AtzE family 2e-30
PRK06061 483 PRK06061, PRK06061, amidase; Provisional 2e-26
PRK07869 468 PRK07869, PRK07869, amidase; Provisional 5e-26
PRK08137 497 PRK08137, PRK08137, amidase; Provisional 7e-25
PRK06565 566 PRK06565, PRK06565, amidase; Validated 3e-22
PRK07235 502 PRK07235, PRK07235, amidase; Provisional 1e-17
PRK06707 536 PRK06707, PRK06707, amidase; Provisional 5e-17
PRK07056 454 PRK07056, PRK07056, amidase; Provisional 3e-16
PRK06828 491 PRK06828, PRK06828, amidase; Provisional 8e-16
PRK06102 452 PRK06102, PRK06102, hypothetical protein; Provisio 2e-15
PRK08186 600 PRK08186, PRK08186, allophanate hydrolase; Provisi 6e-15
TIGR02713 561 TIGR02713, allophanate_hyd, allophanate hydrolase 4e-14
PRK08310 395 PRK08310, PRK08310, amidase; Provisional 3e-13
PRK05962 424 PRK05962, PRK05962, amidase; Validated 4e-13
PRK11910 615 PRK11910, PRK11910, amidase; Provisional 4e-13
PLN02722 422 PLN02722, PLN02722, indole-3-acetamide amidohydrol 1e-12
PRK07139 439 PRK07139, PRK07139, amidase; Provisional 8e-06
COG0154475 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransf 5e-04
>gnl|CDD|216494 pfam01425, Amidase, Amidase Back     alignment and domain information 
 Score =  207 bits (530), Expect = 1e-61
 Identities = 100/291 (34%), Positives = 146/291 (50%), Gaps = 24/291 (8%)

Query: 205 EVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKES 264
           E+V+A+++R E  NP LNA V   + EAL +AKAAD++ A +E     P  GVP + K++
Sbjct: 1   ELVEAYLDRAEAANPKLNAFVTVFFEEALAQAKAADKRRARKEKG---PLHGVPISLKDN 57

Query: 265 TACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPEL-LWSESRNMVYGQS 323
              KG+  T G  A +G     DA +VER++ AG ++LG TN+ E  + S + N  +G +
Sbjct: 58  IDVKGVPTTAGSKALEGYPPPYDATVVERLRAAGAVILGKTNMDEFAMGSTTENSAFGPT 117

Query: 324 NNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSR 383
            NP++L RT G SSGG A  V+A    L +GTD GGS RIPA +CG+ G K T G V+  
Sbjct: 118 RNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPAAFCGLVGLKPTYGRVSRY 177

Query: 384 GIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKL---------PAYNFDKSVDLA 434
           G+         S+   GP+ +  ED       +   D           P +       L 
Sbjct: 178 GVVPY----SSSLDHVGPLARTVEDAALLLDVIAGYDPADPTSAPSPVPDFAEPLKKSLK 233

Query: 435 KLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALK----VVSHSEPEDLSHI 481
            L++    E     + P   ++ +A+RK   AL+     V   EP  L H 
Sbjct: 234 GLRIGVPREDFYFSLDP---EVQRAVRKAAAALEALGHEVVEVEPPSLKHA 281

Length = 431
>gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235723 PRK06170, PRK06170, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236029 PRK07487, PRK07487, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236030 PRK07488, PRK07488, indole acetimide hydrolase; Validated Back     alignment and domain information
>gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>gnl|CDD|232842 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit Back     alignment and domain information
>gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180608 PRK06529, PRK06529, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180437 PRK06169, PRK06169, putative amidase; Provisional Back     alignment and domain information
>gnl|CDD|235915 PRK07042, PRK07042, amidase; Provisional Back     alignment and domain information
>gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family Back     alignment and domain information
>gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional Back     alignment and domain information
>gnl|CDD|181154 PRK07869, PRK07869, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180626 PRK06565, PRK06565, amidase; Validated Back     alignment and domain information
>gnl|CDD|235979 PRK07235, PRK07235, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235855 PRK06707, PRK06707, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235921 PRK07056, PRK07056, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180715 PRK06828, PRK06828, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235698 PRK06102, PRK06102, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236177 PRK08186, PRK08186, allophanate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|233981 TIGR02713, allophanate_hyd, allophanate hydrolase Back     alignment and domain information
>gnl|CDD|181375 PRK08310, PRK08310, amidase; Provisional Back     alignment and domain information
>gnl|CDD|168315 PRK05962, PRK05962, amidase; Validated Back     alignment and domain information
>gnl|CDD|183377 PRK11910, PRK11910, amidase; Provisional Back     alignment and domain information
>gnl|CDD|166363 PLN02722, PLN02722, indole-3-acetamide amidohydrolase Back     alignment and domain information
>gnl|CDD|235945 PRK07139, PRK07139, amidase; Provisional Back     alignment and domain information
>gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 507
PRK07487 469 amidase; Provisional 100.0
COG0154 475 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su 100.0
PRK06170 490 amidase; Provisional 100.0
PRK07486 484 amidase; Provisional 100.0
PRK06169 466 putative amidase; Provisional 100.0
PRK07042 464 amidase; Provisional 100.0
PRK08137 497 amidase; Provisional 100.0
TIGR00132 460 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 100.0
PRK09201 465 amidase; Provisional 100.0
PRK06102 452 hypothetical protein; Provisional 100.0
TIGR02715 452 amido_AtzE amidohydrolase, AtzE family. Members of 100.0
PRK00012 459 gatA aspartyl/glutamyl-tRNA amidotransferase subun 100.0
PRK07056 454 amidase; Provisional 100.0
PRK07488 472 indole acetimide hydrolase; Validated 100.0
PRK07869 468 amidase; Provisional 100.0
PF01425 441 Amidase: Amidase; InterPro: IPR000120 Amidase sign 100.0
PRK12470 462 amidase; Provisional 100.0
PRK06529 482 amidase; Provisional 100.0
PRK06061 483 amidase; Provisional 100.0
PRK11910 615 amidase; Provisional 100.0
PRK08186 600 allophanate hydrolase; Provisional 100.0
PRK06828 491 amidase; Provisional 100.0
PRK06707 536 amidase; Provisional 100.0
PRK05962 424 amidase; Validated 100.0
PRK06565 566 amidase; Validated 100.0
PRK07235 502 amidase; Provisional 100.0
TIGR02713 561 allophanate_hyd allophanate hydrolase. Allophanate 100.0
PRK07139 439 amidase; Provisional 100.0
KOG1212|consensus 560 100.0
PRK08310 395 amidase; Provisional 100.0
KOG1211|consensus 506 100.0
PLN02722 422 indole-3-acetamide amidohydrolase 100.0
PRK06061483 amidase; Provisional 99.73
PRK06169466 putative amidase; Provisional 99.73
PRK07042464 amidase; Provisional 99.73
COG0154475 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su 99.73
PRK12470462 amidase; Provisional 99.72
PRK06529482 amidase; Provisional 99.72
PRK07486484 amidase; Provisional 99.71
PRK07235502 amidase; Provisional 99.71
PRK06170490 amidase; Provisional 99.71
PRK06102452 hypothetical protein; Provisional 99.7
TIGR02715452 amido_AtzE amidohydrolase, AtzE family. Members of 99.69
PRK09201465 amidase; Provisional 99.69
PRK07869468 amidase; Provisional 99.69
PLN02722422 indole-3-acetamide amidohydrolase 99.69
PRK08310395 amidase; Provisional 99.69
PRK07056454 amidase; Provisional 99.67
PRK07487469 amidase; Provisional 99.67
PRK07488472 indole acetimide hydrolase; Validated 99.67
TIGR00132460 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 99.67
PRK07139439 amidase; Provisional 99.66
TIGR02713561 allophanate_hyd allophanate hydrolase. Allophanate 99.66
PRK05962424 amidase; Validated 99.66
PRK08137497 amidase; Provisional 99.65
PRK00012459 gatA aspartyl/glutamyl-tRNA amidotransferase subun 99.65
PRK08186600 allophanate hydrolase; Provisional 99.64
PRK06828491 amidase; Provisional 99.47
PF01425441 Amidase: Amidase; InterPro: IPR000120 Amidase sign 99.45
KOG1212|consensus560 99.42
PRK06707536 amidase; Provisional 99.3
PRK11910615 amidase; Provisional 99.15
KOG1211|consensus506 98.99
PRK06565566 amidase; Validated 98.98
>PRK07487 amidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-74  Score=619.85  Aligned_cols=310  Identities=28%  Similarity=0.375  Sum_probs=278.7

Q ss_pred             ccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCeeEEecCcHHHHHHHHHHHHHHHccCCCCCCCCCCccEEEec
Q psy7560         184 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSKE  263 (507)
Q Consensus       184 ~~~~s~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~~~~~~pL~GiP~~vKD  263 (507)
                      +..+|+.+|+++|++|++|++||++++++||++.|+.+||++++++|+|+++|+++|+++++|+.  .+||+||||+|||
T Consensus         5 ~~~~~~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~lna~~~~~~e~al~~A~~~d~~~~~g~~--~gpL~GvPi~vKD   82 (469)
T PRK07487          5 LWRLSAAELAAAVRSRDVSAREAAEAALARLDAVNPAINAVVDHRPEEALAQADAVDAARARGDD--PGPLAGVPVTVKV   82 (469)
T ss_pred             hhhCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHCCCccEEEEeCHHHHHHHHHHhHHHHhcCCC--CCCcCCCEEEEec
Confidence            56679999999999999999999999999999999999999999999999999999999888776  5999999999999


Q ss_pred             CCCCCCCcCCcCcccccCCCCCCcHHHHHHHHHcCCeEEEccccCCcC-CCCCCCCCCCCCCCCCCCCCCCCCCCchhHH
Q psy7560         264 STACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEAC  342 (507)
Q Consensus       264 ~~~v~G~~tt~Gs~~~~~~~~~~da~~V~~L~~aGAii~GkTn~~e~~-~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaa  342 (507)
                      +|+|+|++||+||..+.++++.+||++|+||+++|||++||||||||+ +.++.|++||.|+||||++|+|||||||||+
T Consensus        83 ~~~v~G~~tt~Gs~~~~~~~~~~da~vV~rLr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~~GGSSgGsAa  162 (469)
T PRK07487         83 NVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKAGAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGAAA  162 (469)
T ss_pred             ccccCCCccCcchHHhcCCCCCCchHHHHHHHHCCCEEEEecChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999999


Q ss_pred             hhhcCCCceeeeccCCCcccccccccCcceeecCCCCccCCCCCCCCC-CCCCCcceeccccCChhhHHHHHHHhcCCCC
Q psy7560         343 LVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDG-KEGKSMLAAGPIVKHAEDLLPYSKCLILPDK  421 (507)
Q Consensus       343 aVaag~~~~alGtDtgGSiR~PAa~~Gv~G~kPt~G~v~~~G~~p~~~-~~~~~~~~~Gp~ar~v~D~~~~~~~l~~~~~  421 (507)
                      +||+|++++|+|||||||||+||+||||||||||+|++|..|+++... ....++|++|||||||+|+++++++|.++++
T Consensus       163 AVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~d~  242 (469)
T PRK07487        163 AVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAPDP  242 (469)
T ss_pred             HHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCCCC
Confidence            999999999999999999999999999999999999999999874211 0112688999999999999999999999988


Q ss_pred             CCCCCCCcc--CCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEcC-CCCchHHHHHHHHHHHhhc
Q psy7560         422 LPAYNFDKS--VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLS-HIKQFRLGYDVWRYWVSKE  498 (507)
Q Consensus       422 ~d~~~~~~~--~~~~~lrig~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~~~G~~v~~~~-~~p~~~~~~~~~~~~~~~d  498 (507)
                      .|+...+.+  .+.+++|||++.+.+   ...++++++++++++++.|+++ |++|++ + ++|.+.+....|..++..|
T Consensus       243 ~d~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~~~~~~~~~~~~~~~~~~e  317 (469)
T PRK07487        243 RDPWWVPAPLEGPPRPKRVALCVRPD---GLDVDPEVEAALRDAARRLEDA-GWTVEE-VDDTPPLREAAELQERLWLGD  317 (469)
T ss_pred             CCCccCCCCccCCCCCcEEEEECCCC---CCCCCHHHHHHHHHHHHHHHHC-CCEEEe-cCCCCchHHHHHHHHHHHHHH
Confidence            777654322  235789999997643   3468999999999999999996 999999 8 8888777766665555544


Q ss_pred             Cc
Q psy7560         499 KD  500 (507)
Q Consensus       499 ~~  500 (507)
                      ..
T Consensus       318 ~~  319 (469)
T PRK07487        318 GY  319 (469)
T ss_pred             HH
Confidence            43

>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06170 amidase; Provisional Back     alignment and domain information
>PRK07486 amidase; Provisional Back     alignment and domain information
>PRK06169 putative amidase; Provisional Back     alignment and domain information
>PRK07042 amidase; Provisional Back     alignment and domain information
>PRK08137 amidase; Provisional Back     alignment and domain information
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit Back     alignment and domain information
>PRK09201 amidase; Provisional Back     alignment and domain information
>PRK06102 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02715 amido_AtzE amidohydrolase, AtzE family Back     alignment and domain information
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>PRK07056 amidase; Provisional Back     alignment and domain information
>PRK07488 indole acetimide hydrolase; Validated Back     alignment and domain information
>PRK07869 amidase; Provisional Back     alignment and domain information
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence Back     alignment and domain information
>PRK12470 amidase; Provisional Back     alignment and domain information
>PRK06529 amidase; Provisional Back     alignment and domain information
>PRK06061 amidase; Provisional Back     alignment and domain information
>PRK11910 amidase; Provisional Back     alignment and domain information
>PRK08186 allophanate hydrolase; Provisional Back     alignment and domain information
>PRK06828 amidase; Provisional Back     alignment and domain information
>PRK06707 amidase; Provisional Back     alignment and domain information
>PRK05962 amidase; Validated Back     alignment and domain information
>PRK06565 amidase; Validated Back     alignment and domain information
>PRK07235 amidase; Provisional Back     alignment and domain information
>TIGR02713 allophanate_hyd allophanate hydrolase Back     alignment and domain information
>PRK07139 amidase; Provisional Back     alignment and domain information
>KOG1212|consensus Back     alignment and domain information
>PRK08310 amidase; Provisional Back     alignment and domain information
>KOG1211|consensus Back     alignment and domain information
>PLN02722 indole-3-acetamide amidohydrolase Back     alignment and domain information
>PRK06061 amidase; Provisional Back     alignment and domain information
>PRK06169 putative amidase; Provisional Back     alignment and domain information
>PRK07042 amidase; Provisional Back     alignment and domain information
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12470 amidase; Provisional Back     alignment and domain information
>PRK06529 amidase; Provisional Back     alignment and domain information
>PRK07486 amidase; Provisional Back     alignment and domain information
>PRK07235 amidase; Provisional Back     alignment and domain information
>PRK06170 amidase; Provisional Back     alignment and domain information
>PRK06102 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02715 amido_AtzE amidohydrolase, AtzE family Back     alignment and domain information
>PRK09201 amidase; Provisional Back     alignment and domain information
>PRK07869 amidase; Provisional Back     alignment and domain information
>PLN02722 indole-3-acetamide amidohydrolase Back     alignment and domain information
>PRK08310 amidase; Provisional Back     alignment and domain information
>PRK07056 amidase; Provisional Back     alignment and domain information
>PRK07487 amidase; Provisional Back     alignment and domain information
>PRK07488 indole acetimide hydrolase; Validated Back     alignment and domain information
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit Back     alignment and domain information
>PRK07139 amidase; Provisional Back     alignment and domain information
>TIGR02713 allophanate_hyd allophanate hydrolase Back     alignment and domain information
>PRK05962 amidase; Validated Back     alignment and domain information
>PRK08137 amidase; Provisional Back     alignment and domain information
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>PRK08186 allophanate hydrolase; Provisional Back     alignment and domain information
>PRK06828 amidase; Provisional Back     alignment and domain information
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence Back     alignment and domain information
>KOG1212|consensus Back     alignment and domain information
>PRK06707 amidase; Provisional Back     alignment and domain information
>PRK11910 amidase; Provisional Back     alignment and domain information
>KOG1211|consensus Back     alignment and domain information
>PRK06565 amidase; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
3a2p_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 3e-20
3a2q_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 6e-20
3h0l_A 478 Structure Of Trna-Dependent Amidotransferase Gatcab 1e-17
3kfu_E 471 Crystal Structure Of The Transamidosome Length = 47 2e-17
1m21_A 503 Crystal Structure Analysis Of The Peptide Amidase P 2e-16
2wap_A 543 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 7e-15
2wj1_A 573 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 8e-15
2vya_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Con 8e-15
4hbp_A 550 Crystal Structure Of Faah In Complex With Inhibitor 1e-14
1mt5_A 537 Crystal Structure Of Fatty Acid Amide Hydrolase Len 1e-14
4do3_A 571 Structure Of Faah With A Non-steroidal Anti-inflamm 2e-14
3qk5_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Wit 2e-14
2df4_A 485 Structure Of Trna-Dependent Amidotransferase Gatcab 5e-13
2dc0_A 434 Crystal Structure Of Amidase Length = 434 9e-13
3al0_A 475 Crystal Structure Of The Glutamine Transamidosome F 1e-12
2gi3_A 476 Crystal Structure Of Glutamyl-Trna(Gln) Amidotransf 3e-11
4gyr_A 621 Granulibacter Bethesdensis Allophanate Hydrolase Ap 3e-08
3a1k_A 521 Crystal Structure Of Rhodococcus Sp. N771 Amidase L 2e-07
3a1i_A 521 Crystal Structure Of Rhodococcus Sp. N-771 Amidase 4e-07
>pdb|3A2P|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Length = 493 Back     alignment and structure 
Iteration: 1

 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 15/199 (7%)
Query: 187 ESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALE 246
           + AT  A+ +R+  I+  E+++A I  ++ VNP +NA++   + +A  E+          
Sbjct: 8   QDATAQAELVRSGEISRTELLEATIAHVQAVNPEINAVIIPLFEKARRES---------- 57
Query: 247 EDISDKPYLGVPFTSKESTAC-KGLSNTLGL--LARKGKKADADAYIVERVKTAGGILLG 303
            +++  P+ GVP+  K+ T   +G  NT  +  +   G +AD DAY V+R++ AG +LLG
Sbjct: 58  -ELASGPFAGVPYLLKDLTVVSQGDINTSSIKGMKESGYRADHDAYFVQRMRAAGFVLLG 116
Query: 304 NTNIPEL-LWSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNR 362
            TN PE+     +    +G + NP+NL R+ G SSGG    V+A  S +  G D  GS R
Sbjct: 117 KTNTPEMGNQVTTEPEAWGATRNPWNLGRSVGGSSGGSGAAVAAALSPVAHGNDAAGSVR 176
Query: 363 IPALYCGVYGHKLTTGSVN 381
           IPA  CGV G K T G ++
Sbjct: 177 IPASVCGVVGLKPTRGRIS 195
>pdb|3A2Q|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Complexed With Substrate Length = 493 Back     alignment and structure
>pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus Length = 478 Back     alignment and structure
>pdb|3KFU|E Chain E, Crystal Structure Of The Transamidosome Length = 471 Back     alignment and structure
>pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503 Back     alignment and structure
>pdb|2WAP|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With The Drug-Like Urea Inhibitor Pf-3845 Length = 543 Back     alignment and structure
>pdb|2WJ1|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With 7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One, An Alpha-Ketooxazole Length = 573 Back     alignment and structure
>pdb|2VYA|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated With The Drug-Like Inhibitor Pf-750 Length = 587 Back     alignment and structure
>pdb|4HBP|A Chain A, Crystal Structure Of Faah In Complex With Inhibitor Length = 550 Back     alignment and structure
>pdb|1MT5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Length = 537 Back     alignment and structure
>pdb|4DO3|A Chain A, Structure Of Faah With A Non-steroidal Anti-inflammatory Drug Length = 571 Back     alignment and structure
>pdb|3QK5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small Molecule Inhibitor Length = 587 Back     alignment and structure
>pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Mn2+ Length = 485 Back     alignment and structure
>pdb|2DC0|A Chain A, Crystal Structure Of Amidase Length = 434 Back     alignment and structure
>pdb|3AL0|A Chain A, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 475 Back     alignment and structure
>pdb|2GI3|A Chain A, Crystal Structure Of Glutamyl-Trna(Gln) Amidotransferase Subunit A (Tm1272) From Thermotoga Maritima At 1.80 A Resolution Length = 476 Back     alignment and structure
>pdb|4GYR|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase Apo Length = 621 Back     alignment and structure
>pdb|3A1K|A Chain A, Crystal Structure Of Rhodococcus Sp. N771 Amidase Length = 521 Back     alignment and structure
>pdb|3A1I|A Chain A, Crystal Structure Of Rhodococcus Sp. N-771 Amidase Complexed With Benzamide Length = 521 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query507
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 8e-89
3ppm_A573 Fatty-acid amide hydrolase 1; protein-inhibitor co 8e-06
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 9e-61
2dc0_A 434 Probable amidase; structural genomics, NPPSFA, nat 4e-45
3ip4_A 485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 4e-42
3h0l_A 478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 3e-40
1m22_A 503 Peptide amidase, PAM; eleven-stranded beta sheet, 3e-40
3kfu_E 471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 4e-40
1o9p_A 414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 4e-40
2gi3_A 476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 7e-35
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 6e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Length = 573 Back     alignment and structure
 Score =  282 bits (723), Expect = 8e-89
 Identities = 83/344 (24%), Positives = 150/344 (43%), Gaps = 26/344 (7%)

Query: 138 FSSFSKRWF--KGIRRVMTGFGDGQRW-FKGIRRVMTDEAFPLPPV-KNKIVLESATQIA 193
            S  + RW   +  R   T     QR   + + + +       P +    ++     Q+ 
Sbjct: 18  GSHMASRWTGRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLV 77

Query: 194 KKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKP 253
           +K+++  ++   V   ++ +  +VN   N +         + ++A  Q            
Sbjct: 78  QKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQG----------L 127

Query: 254 YLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPE-LLW 312
             GVP + KE  + KG  +TLGL   +G  +++D  +V+ +K  G +   +TN+P+ +  
Sbjct: 128 LYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFS 187

Query: 313 SESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNRIPALYCGVYG 372
            +  N ++GQ+ NP+   ++ G SSGGE  L+ + GS LGLGTD+GGS R P+ +CG+ G
Sbjct: 188 YDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICG 247

Query: 373 HKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDKLPA-------- 424
            K T   ++  G+ G    +    L+ GP+ +  E L    K L+               
Sbjct: 248 LKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLP 307

Query: 425 YNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALK 468
           +  +       L+V Y E       SP    M +A+ +    L+
Sbjct: 308 FREEVYRSSRPLRVGYYETDNYTMPSP---AMRRALIETKQRLE 348
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Length = 573 Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Length = 493 Back     alignment and structure
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434 Back     alignment and structure
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Length = 485 Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Length = 478 Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Length = 503 Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Length = 471 Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Length = 414 Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Length = 476 Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Length = 521 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
3ip4_A 485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
2dc0_A 434 Probable amidase; structural genomics, NPPSFA, nat 100.0
3h0l_A 478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
1m22_A 503 Peptide amidase, PAM; eleven-stranded beta sheet, 100.0
3kfu_E 471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 100.0
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 100.0
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 100.0
2gi3_A 476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 100.0
1o9p_A 414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 100.0
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 100.0
3a2q_A493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 99.74
3kfu_E471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 99.74
2dc0_A434 Probable amidase; structural genomics, NPPSFA, nat 99.72
1o9p_A414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 99.71
3h0l_A478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 99.71
3ip4_A485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 99.71
2gi3_A476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 99.69
3a1k_A521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 99.67
1m22_A503 Peptide amidase, PAM; eleven-stranded beta sheet, 99.62
3ppm_A573 Fatty-acid amide hydrolase 1; protein-inhibitor co 99.61
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Back     alignment and structure
Probab=100.00  E-value=5.7e-78  Score=647.56  Aligned_cols=304  Identities=25%  Similarity=0.367  Sum_probs=281.9

Q ss_pred             cccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCeeEEecCcHHHHHHHHHHHHHH-HccCCCCCCCCCCccEEE
Q psy7560         183 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKI-ALEEDISDKPYLGVPFTS  261 (507)
Q Consensus       183 ~~~~~s~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~~~-~~~~~~~~~pL~GiP~~v  261 (507)
                      ++.++|+.+|+++|++|++|++||+++|++||+++|+.+||++++++++|+++|+++|+++ ++|+.   +|||||||+|
T Consensus         2 ~l~~~~~~~l~~~i~~g~~s~~el~~a~l~ri~~~~~~lna~~~~~~~~Al~~A~~~d~~~~~~g~~---gpL~GvPi~v   78 (485)
T 3ip4_A            2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMD---GKLFGIPMGI   78 (485)
T ss_dssp             CGGGCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHTTCCC---STTTTCEEEE
T ss_pred             CcccCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHHHHHHhcCCC---CCcCCCEEEE
Confidence            4677899999999999999999999999999999999999999999999999999999998 66654   8999999999


Q ss_pred             ecCCCCCCCcCCcCcccccCCCCCCcHHHHHHHHHcCCeEEEccccCCcC-CCCCCCCCCCCCCCCCCCCCCCCCCCchh
Q psy7560         262 KESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGE  340 (507)
Q Consensus       262 KD~~~v~G~~tt~Gs~~~~~~~~~~da~~V~~L~~aGAii~GkTn~~e~~-~~~~~n~~~G~~~NP~~~~~~~GGSSgGs  340 (507)
                      ||||+++|++||+||..+.++++.+||++|+||+++|||++||||||||+ +.++.|++||+|+||||++++||||||||
T Consensus        79 KD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n~~~G~t~NP~~~~~~pGGSSgGs  158 (485)
T 3ip4_A           79 KDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGS  158 (485)
T ss_dssp             ETTBCBTTBCCCTTSGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHH
T ss_pred             EcCcccCCCccCCCChhhcCCCCCCCcHHHHHHHHCCCEEEEecCCcccccCCCCCCCCCCCcCCccccCcCCCCCccHH
Confidence            99999999999999999999999999999999999999999999999999 99999999999999999999999999999


Q ss_pred             HHhhhcCCCceeeeccCCCcccccccccCcceeecCCCCccCCCCCCCCCCCCCCcceeccccCChhhHHHHHHHhcCCC
Q psy7560         341 ACLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPD  420 (507)
Q Consensus       341 aaaVaag~~~~alGtDtgGSiR~PAa~~Gv~G~kPt~G~v~~~G~~p~~~~~~~~~~~~Gp~ar~v~D~~~~~~~l~~~~  420 (507)
                      |++||+|++++|+|||||||||+||+||||||||||+|+||+.|++|.+.    ++|++|||||||+|+++++++|.|+|
T Consensus       159 AaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~p~~~----sld~~Gp~aRsv~D~a~~l~vl~g~d  234 (485)
T 3ip4_A          159 AAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFAS----SLDQIGPLTRNVKDNAIVLEAISGAD  234 (485)
T ss_dssp             HHHHHTTSCSEEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCT----TTCCEEEEESSHHHHHHHHHHHBSCC
T ss_pred             HHHhhcCCCceeeeccCCcchhhhHHHhCCeeecCCCCcccCCCCCCccc----ccceeccccCCHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999987    89999999999999999999999999


Q ss_pred             CCCCCCCCcc---------CCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEcCCCCchHHHHHHH
Q psy7560         421 KLPAYNFDKS---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVW  491 (507)
Q Consensus       421 ~~d~~~~~~~---------~~~~~lrig~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~~~G~~v~~~~~~p~~~~~~~~~  491 (507)
                      +.|+...+.+         .+++++|||++.+.   +...++|+++++++++++.|+++ ||+|++ +++|.+......|
T Consensus       235 ~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~~~---~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~-~~~p~~~~~~~~~  309 (485)
T 3ip4_A          235 VNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEY---LGEGVADDVKEAVQNAVETLKSL-GAVVEE-VSLPNTKFGIPSY  309 (485)
T ss_dssp             TTCTTSCCCCCCCCSTTTTCCCTTCEEEEEGGG---GSTTSCHHHHHHHHHHHHHHHHT-TCEEEE-ECCTTGGGHHHHH
T ss_pred             cccccccccCccchhhhhccCccCcEEEEECCc---ccCCCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCcHHHHHHHH
Confidence            8887654322         13588999999752   24578999999999999999996 999999 9999887777777


Q ss_pred             HHHHhhc
Q psy7560         492 RYWVSKE  498 (507)
Q Consensus       492 ~~~~~~d  498 (507)
                      ..++..|
T Consensus       310 ~~~~~~e  316 (485)
T 3ip4_A          310 YVIASSE  316 (485)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6655544
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Back     alignment and structure
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Back     alignment and structure
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 507
d2f2aa1 485 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransf 2e-50
d2f2aa1485 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransf 6e-05
d2gi3a1 475 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransf 3e-41
d2gi3a1475 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransf 8e-05
d1mt5a_ 537 c.117.1.1 (A:) Fatty acid amide hydrolase (oleamid 1e-32
d1mt5a_537 c.117.1.1 (A:) Fatty acid amide hydrolase (oleamid 9e-04
d1m22a_ 490 c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomon 2e-29
d1m22a_490 c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomon 5e-04
d1ocka_ 412 c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium jap 3e-20
d1ocka_412 c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium jap 2e-05
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

 Score =  177 bits (449), Expect = 2e-50
 Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 20/319 (6%)

Query: 184 IVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKI 243
           I  ES   +   I++K I   +VV+   + IE+ +P + + +      A+++A+  D+  
Sbjct: 3   IRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQ 62

Query: 244 ALEEDISDKPYLGVPFTSKESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLG 303
           A  +D  D    G+P   K++    GL  T      +G     ++ ++E++     +L+G
Sbjct: 63  A--KDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIG 120

Query: 304 NTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEACLVSACGSVLGLGTDLGGSNR 362
             N+ E      +    + ++ NP++     G SSGG A  V+A    L LG+D GGS R
Sbjct: 121 KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIR 180

Query: 363 IPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDL---------LPYS 413
            PA YCGV G K T G V+  G+         S+   GP+ ++ +D             +
Sbjct: 181 QPAAYCGVVGMKPTYGRVSRFGLVAF----ASSLDQIGPLTRNVKDNAIVLEAISGADVN 236

Query: 414 KCLILPDKLPAYNFDKSVDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHS 473
                P     +  +   D+  LKV   +E     V+    D+ +A++  V  LK +   
Sbjct: 237 DSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVAD---DVKEAVQNAVETLKSLGAV 293

Query: 474 -EPEDLSHIKQFRLGYDVW 491
            E   L + K     Y V 
Sbjct: 294 VEEVSLPNTKFGIPSYYVI 312
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485 Back     information, alignment and structure
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Length = 475 Back     information, alignment and structure
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Length = 475 Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 537 Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 537 Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490 Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490 Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Length = 412 Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Length = 412 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query507
d2f2aa1 485 Glutamyl-tRNA(Gln) amidotransferase subunit A {Sta 100.0
d1mt5a_ 537 Fatty acid amide hydrolase (oleamide hydrolase) {R 100.0
d1m22a_ 490 Peptide amidase Pam {Stenotrophomonas maltophilia 100.0
d2gi3a1 475 Glutamyl-tRNA(Gln) amidotransferase subunit A {The 100.0
d1ocka_ 412 Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 100.0
d1ocka_412 Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 99.73
d2gi3a1475 Glutamyl-tRNA(Gln) amidotransferase subunit A {The 99.68
d2f2aa1485 Glutamyl-tRNA(Gln) amidotransferase subunit A {Sta 99.67
d1mt5a_537 Fatty acid amide hydrolase (oleamide hydrolase) {R 99.66
d1m22a_490 Peptide amidase Pam {Stenotrophomonas maltophilia 99.54
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=3.7e-75  Score=622.81  Aligned_cols=305  Identities=25%  Similarity=0.370  Sum_probs=283.8

Q ss_pred             cccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCeeEEecCcHHHHHHHHHHHHHHHccCCCCCCCCCCccEEEe
Q psy7560         183 KIVLESATQIAKKIRNKNITSVEVVQAFIERIEQVNPYLNAMVDTRYTEALEEAKAADQKIALEEDISDKPYLGVPFTSK  262 (507)
Q Consensus       183 ~~~~~s~~~l~~~l~~g~~t~~ev~~~~l~ri~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~~~~~~pL~GiP~~vK  262 (507)
                      .|.+.|+.||+++|++|++|++||+++|++||+++|+.+||++++++++|+++|+++|+++++|+.  ++|||||||+||
T Consensus         2 ~~~~~s~~~l~~~~~~~~~s~~e~~~~~l~ri~~~~~~lna~~~~~~~~a~~~A~~~d~~~~~~~~--~gpL~GiPi~vK   79 (485)
T d2f2aa1           2 SIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQM--DGKLFGIPMGIK   79 (485)
T ss_dssp             CSTTCCHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHTTCC--CSTTTTCEEEEE
T ss_pred             CCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCccEEEEeCHHHHHHHHHHHHHHHHCCCC--CCCcCcCeEEEE
Confidence            467789999999999999999999999999999999999999999999999999999999998876  599999999999


Q ss_pred             cCCCCCCCcCCcCcccccCCCCCCcHHHHHHHHHcCCeEEEccccCCcC-CCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q psy7560         263 ESTACKGLSNTLGLLARKGKKADADAYIVERVKTAGGILLGNTNIPELL-WSESRNMVYGQSNNPYNLCRTTGASSGGEA  341 (507)
Q Consensus       263 D~~~v~G~~tt~Gs~~~~~~~~~~da~~V~~L~~aGAii~GkTn~~e~~-~~~~~n~~~G~~~NP~~~~~~~GGSSgGsa  341 (507)
                      |+|+|+|++||+||..+.++.+.+|+++|++|+++|||++||||||||+ +..+.|..||+++||||++++|||||||||
T Consensus        80 D~~~v~g~~tt~Gs~~~~~~~~~~d~~~v~~l~~~Gai~~gkt~~~e~~~~~~~~n~~~g~~~NP~~~~~~~GGSSgGsa  159 (485)
T d2f2aa1          80 DNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSA  159 (485)
T ss_dssp             TTBCBTTBCCCTTCGGGTTCCCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHH
T ss_pred             cccccCCCccCCcChhhccCCccccccccccccccccccccccchhhhcccccccCccccCcCCCCCcccccCCccccch
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999999


Q ss_pred             HhhhcCCCceeeeccCCCcccccccccCcceeecCCCCccCCCCCCCCCCCCCCcceeccccCChhhHHHHHHHhcCCCC
Q psy7560         342 CLVSACGSVLGLGTDLGGSNRIPALYCGVYGHKLTTGSVNSRGIYGRDGKEGKSMLAAGPIVKHAEDLLPYSKCLILPDK  421 (507)
Q Consensus       342 aaVaag~~~~alGtDtgGSiR~PAa~~Gv~G~kPt~G~v~~~G~~p~~~~~~~~~~~~Gp~ar~v~D~~~~~~~l~~~~~  421 (507)
                      ++||+|++++|+|||||||||+||+||||||||||+|+||++|++|.++    ++|++|||||+|+|+++++++|.+.++
T Consensus       160 aavA~g~~~~alGtDt~GSiR~PAa~~Gl~G~kPt~G~is~~g~~~~~~----~~d~~Gpmar~v~D~~~ll~~~~g~~~  235 (485)
T d2f2aa1         160 AAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFAS----SLDQIGPLTRNVKDNAIVLEAISGADV  235 (485)
T ss_dssp             HHHHTTSCSCEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCT----TTCCEEEEESSHHHHHHHHHHHBSCBT
T ss_pred             hhHHhccCceEEecCCCchhhhhHHHhCceeecCCCCCCCCCCCCCCcc----cCCeeccccCCHHHHHHHHhhcccccc
Confidence            9999999999999999999999999999999999999999999999998    999999999999999999999999998


Q ss_pred             CCCCCCCcc---------CCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEcCCCCchHHHHHHHH
Q psy7560         422 LPAYNFDKS---------VDLAKLKVFYVEEPGDMKVSPMSKDMIQAIRKCVNALKVVSHSEPEDLSHIKQFRLGYDVWR  492 (507)
Q Consensus       422 ~d~~~~~~~---------~~~~~lrig~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~~~G~~v~~~~~~p~~~~~~~~~~  492 (507)
                      .|+.+.+.+         .+++++|||++.+..   ...++++++++++++++.|++. |++|++ +++|.+......|.
T Consensus       236 ~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~~~---~~~~~~~i~~a~~~a~~~L~~~-G~~v~e-v~lp~~~~~~~~~~  310 (485)
T d2f2aa1         236 NDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYL---GEGVADDVKEAVQNAVETLKSL-GAVVEE-VSLPNTKFGIPSYY  310 (485)
T ss_dssp             TBTTSCCCCCCCCSTTTTCCCTTCEEEEEGGGG---STTSCHHHHHHHHHHHHHHHHT-TCEEEE-ECCTTGGGHHHHHH
T ss_pred             cccccCCCCccchhhhhcCCccCCEEEEEcccc---cCcCCHHHHHHHHHHHHHHHHC-CCEEEE-eCCCchhhhHHHHH
Confidence            877654332         236899999997643   5678999999999999999996 999999 99998777766665


Q ss_pred             HHHhhc
Q psy7560         493 YWVSKE  498 (507)
Q Consensus       493 ~~~~~d  498 (507)
                      .+...+
T Consensus       311 ~~~~~e  316 (485)
T d2f2aa1         311 VIASSE  316 (485)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555444
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure