Psyllid ID: psy7680

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MSFSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccEEEEEEEEccccccccccccEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHEEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEcccccccEEEEEEEEcccccccccccccEEEEEccccccc
Coil and Loop (DISEMBL)
MSFSSISLCFLLCWvgcttpvlvnndpepflenphylsfdELTKFLVAAAqqnpskvklhsigksvqnrDLWALQISRNVASGRNLLKPMFKYVANIHGDEV
Flexible Loop (DISEMBL)
MSFSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNvasgrnllkPMFKYVANIHGDEV
Low Complexity Region (SEG)
MsfssislcfllcWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV
Disordered region (IsUnstruct)
*****ISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANI*****
Disordered Region (DISOPRED)
***SSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVA**RNLLKPMFKYVANIHGD**
Disordered Region (DISEMBL)
MSFSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV
Disordered Region (DISPRO)
MSFSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSFSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
P42787	1406	Carboxypeptidase D OS=Dro	yes	N/A	0.960	0.069	0.42	4e-15
Q80V42	443	Carboxypeptidase M OS=Mus	yes	N/A	0.794	0.182	0.393	2e-08
P14384	443	Carboxypeptidase M OS=Hom	yes	N/A	0.647	0.148	0.462	4e-08
Q5RFD6	443	Carboxypeptidase M OS=Pon	yes	N/A	0.647	0.148	0.462	4e-08
O89001	1377	Carboxypeptidase D OS=Mus	no	N/A	0.656	0.048	0.382	2e-07
Q9JHW1	1378	Carboxypeptidase D OS=Rat	no	N/A	0.656	0.048	0.382	2e-07
O75976	1380	Carboxypeptidase D OS=Hom	no	N/A	0.656	0.048	0.382	2e-07
Q90240	1389	Carboxypeptidase D OS=Ana	N/A	N/A	0.617	0.045	0.406	4e-07
P83852	380	Carboxypeptidase D (Fragm	N/A	N/A	0.617	0.165	0.406	7e-07
P37892	454	Carboxypeptidase E OS=Lop	N/A	N/A	0.647	0.145	0.373	2e-06

>sp|P42787|CBPD_DROME Carboxypeptidase D OS=Drosophila melanogaster GN=svr PE=1 SV=2

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 3   FSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSI 62
           F+SI +  L   V       +  D E FL+ PHY S ++L        +  P++ K+H +
Sbjct: 8   FASIGIAVLAMGVPHCRGYTIKED-ESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFL 66

Query: 63  GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           G+S++ R+L ALQISRN  S RNLL P  KY+AN+HGDE 
Sbjct: 67  GRSLEGRNLLALQISRNTRS-RNLLTPPVKYIANMHGDET 105

Required for the proper melanization and sclerotization of the cuticle.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 1EC: 7EC: .EC: 2EC: 2

>sp|Q80V42|CBPM_MOUSE Carboxypeptidase M OS=Mus musculus GN=Cpm PE=2 SV=2

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 14  WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWA 73
           W+G   PV+   D         Y   + +  FL + AQ   S   LHSIGKSV+ R+LW 
Sbjct: 7   WLGLLLPVVAALDFR-------YHHQEGMEAFLKSVAQNYSSITHLHSIGKSVRGRNLWV 59

Query: 74  LQISRNVASGRNLLKPMFKYVANIHGDEV 102
           L + +     R  + P FKYVAN+HGDE 
Sbjct: 60  LVVGQTPKEHRVGI-PEFKYVANMHGDET 87

Specifically removes C-terminal basic residues (Arg or Lys) from peptides and proteins. It is believed to play important roles in the control of peptide hormone and growth factor activity at the cell surface, and in the membrane-localized degradation of extracellular proteins.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 1

EC: 2

>sp|P14384|CBPM_HUMAN Carboxypeptidase M OS=Homo sapiens GN=CPM PE=1 SV=2

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y   + +  FL   AQ   S   LHSIGKSV+ R+LW L + R     R +  P FKYVA
Sbjct: 22  YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHR-IGIPEFKYVA 80

Query: 96  NIHGDEV 102
           N+HGDE 
Sbjct: 81  NMHGDET 87

Specifically removes C-terminal basic residues (Arg or Lys) from peptides and proteins. It is believed to play important roles in the control of peptide hormone and growth factor activity at the cell surface, and in the membrane-localized degradation of extracellular proteins.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 1

EC: 2

>sp|Q5RFD6|CBPM_PONAB Carboxypeptidase M OS=Pongo abelii GN=CPM PE=2 SV=1

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y   + +  FL   AQ   S   LHSIGKSV+ R+LW L + R     R +  P FKYVA
Sbjct: 22  YHHQEGMEAFLKTVAQNYSSITHLHSIGKSVKGRNLWVLVVGRFPKEHR-IGIPEFKYVA 80

Query: 96  NIHGDEV 102
           N+HGDE 
Sbjct: 81  NMHGDET 87

Specifically removes C-terminal basic residues (Arg or Lys) from peptides and proteins. It is believed to play important roles in the control of peptide hormone and growth factor activity at the cell surface, and in the membrane-localized degradation of extracellular proteins.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 1

EC: 2

>sp|O89001|CBPD_MOUSE Carboxypeptidase D OS=Mus musculus GN=Cpd PE=1 SV=2

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
           H+  F ++  FL   A + P+  +L+S+GKSV++R+L+ ++IS N        +P FKY+
Sbjct: 501 HHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGV-HEPGEPEFKYI 559

Query: 95  ANIHGDEV 102
            N+HG+EV
Sbjct: 560 GNMHGNEV 567

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|Q9JHW1|CBPD_RAT Carboxypeptidase D OS=Rattus norvegicus GN=Cpd PE=2 SV=2

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
           H+  F ++  FL   A + P+  +L+S+GKSV++R+L+ ++IS N        +P FKY+
Sbjct: 502 HHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGV-HEPGEPEFKYI 560

Query: 95  ANIHGDEV 102
            N+HG+EV
Sbjct: 561 GNMHGNEV 568

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|O75976|CBPD_HUMAN Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=2

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
           H+  F ++  FL   A + P+  +L+S+GKSV++R+L+ ++IS N        +P FKY+
Sbjct: 502 HHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGV-HEPGEPEFKYI 560

Query: 95  ANIHGDEV 102
            N+HG+EV
Sbjct: 561 GNMHGNEV 568

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|Q90240|CBPD_ANAPL Carboxypeptidase D OS=Anas platyrhynchos GN=CPD PE=1 SV=1

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 39  FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH 98
           F ++  FL   A + PS  +L+S+GKSV+ R+L+ ++IS N        +P FKY+ N+H
Sbjct: 515 FSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGI-HEAGEPEFKYIGNMH 573

Query: 99  GDEV 102
           G+EV
Sbjct: 574 GNEV 577

Anas platyrhynchos (taxid: 8839)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|P83852|CBPD_LOPSP Carboxypeptidase D (Fragment) OS=Lophonetta specularioides GN=CPD PE=1 SV=1

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)

Query: 39  FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH 98
           F ++  FL   A + PS  +L+S+GKSV+ R+L+ ++IS N        +P FKY+ N+H
Sbjct: 13  FSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGI-HEAGEPEFKYIGNMH 71

Query: 99  GDEV 102
           G+EV
Sbjct: 72  GNEV 75

Lophonetta specularioides (taxid: 75873)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|P37892|CBPE_LOPAM Carboxypeptidase E OS=Lophius americanus GN=cpe PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y  ++EL K LV+   Q P+  ++++IG+S + R+L  L++S N  +     +P FKY+A
Sbjct: 31  YHRYEELRKALVSVWLQCPTIARIYTIGESFEGRELLVLEMSDNPGT-HEPGEPEFKYIA 89

Query: 96  NIHGDEV 102
           N+HG+E 
Sbjct: 90  NMHGNEA 96

Removes residual C-terminal Arg or Lys remaining after initial endoprotease cleavage during prohormone processing.

Lophius americanus (taxid: 8073)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 1

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
91084647	1366	PREDICTED: similar to AGAP002414-PA [Tri	0.921	0.068	0.469	4e-17
270009281	909	carboxypeptidase A [Tribolium castaneum]	0.921	0.103	0.469	5e-17
170047837	259	conserved hypothetical protein [Culex qu	0.803	0.316	0.494	2e-14
403183363	1457	AAEL017499-PA [Aedes aegypti]	0.921	0.064	0.44	3e-14
332374584	433	unknown [Dendroctonus ponderosae]	0.715	0.168	0.540	1e-13
242015953	1268	carboxypeptidase D precursor, putative [	0.823	0.066	0.447	2e-13
24638882	1406	silver, isoform B [Drosophila melanogast	0.960	0.069	0.42	2e-13
45553831	1439	silver, isoform G [Drosophila melanogast	0.960	0.068	0.42	2e-13
45553847	435	silver, isoform F [Drosophila melanogast	0.960	0.225	0.42	2e-13
974553	1119	carboxypeptidase precursor [Drosophila m	0.960	0.087	0.42	2e-13

>gi|91084647|ref|XP_966816.1| PREDICTED: similar to AGAP002414-PA [Tribolium castaneum]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 4/98 (4%)

Query: 5   SISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGK 64
           S ++  LL  V   +  +++   E FL +P Y ++DELT        ++P  VKLHS+G+
Sbjct: 3   SKAIILLLVLVSSESQSILD---ESFLTSPKYHTYDELTNLFKKLETEHPEIVKLHSVGR 59

Query: 65  SVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           SV+NR+LWAL+I+ NVA+ R L+ PMFKYVAN+HGDE 
Sbjct: 60  SVRNRELWALEINANVAN-RTLMTPMFKYVANMHGDEA 96

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270009281|gb|EFA05729.1| carboxypeptidase A [Tribolium castaneum]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 4/98 (4%)

Query: 5   SISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGK 64
           S ++  LL  V   +  +++   E FL +P Y ++DELT        ++P  VKLHS+G+
Sbjct: 3   SKAIILLLVLVSSESQSILD---ESFLTSPKYHTYDELTNLFKKLETEHPEIVKLHSVGR 59

Query: 65  SVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           SV+NR+LWAL+I+ NVA+ R L+ PMFKYVAN+HGDE 
Sbjct: 60  SVRNRELWALEINANVAN-RTLMTPMFKYVANMHGDEA 96

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170047837|ref|XP_001851414.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167870106|gb|EDS33489.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 3/85 (3%)

Query: 18  TTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQIS 77
           T P++ N   E FL NP Y S +EL   L    + +PS VK+HSIG S++ R L A++I 
Sbjct: 31  TGPIIEN---ESFLANPRYESNEELADLLARLQKDHPSLVKVHSIGSSLEGRPLLAVEIR 87

Query: 78  RNVASGRNLLKPMFKYVANIHGDEV 102
            N+   R LL PMFKYVAN+HGDE 
Sbjct: 88  ANIDRPRQLLMPMFKYVANMHGDET 112

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403183363|gb|EJY58039.1| AAEL017499-PA [Aedes aegypti]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 6/100 (6%)

Query: 9   CFLLCWVGCT------TPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSI 62
           CF+L   G T      +P     + E FL++P Y + DEL   L    + NP+ VK+HSI
Sbjct: 18  CFVLVANGFTLQTSESSPAGAIIEDESFLQSPRYETNDELQDLLARLQKDNPTLVKVHSI 77

Query: 63  GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           G S++NR L  ++I  N+   R LL PMFKYVAN+HGDE 
Sbjct: 78  GSSLENRPLLVVEIRPNIDRPRPLLMPMFKYVANMHGDET 117

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374584|gb|AEE62433.1| unknown [Dendroctonus ponderosae]

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 1/74 (1%)

Query: 28  EPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLL 87
           E FL +P Y S+DELT        +N    KL S+G+SV+NR+LWAL I+ NV + R LL
Sbjct: 26  EDFLIDPRYYSYDELTNAFRKLETENSQIAKLVSVGRSVKNRELWALHINANVHN-RTLL 84

Query: 88  KPMFKYVANIHGDE 101
            PMFKYV N+HGDE
Sbjct: 85  TPMFKYVGNMHGDE 98

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015953|ref|XP_002428607.1| carboxypeptidase D precursor, putative [Pediculus humanus corporis] gi|212513251|gb|EEB15869.1| carboxypeptidase D precursor, putative [Pediculus humanus corporis]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 1/85 (1%)

Query: 18  TTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQIS 77
           T  +    D    L    Y ++++LT +L   +++  + +KLHS+GKSVQNR+LW ++I+
Sbjct: 20  TRSIFSKEDERKKLFKESYFNYEQLTDYLHYMSEKYSNIIKLHSVGKSVQNRNLWVVEIN 79

Query: 78  RNVASGRNLLKPMFKYVANIHGDEV 102
            + A  R+LLKPMFKYVAN+HGDE 
Sbjct: 80  TD-AENRSLLKPMFKYVANMHGDEA 103

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24638882|ref|NP_525032.2| silver, isoform B [Drosophila melanogaster] gi|13124695|sp|P42787.2|CBPD_DROME RecName: Full=Carboxypeptidase D; AltName: Full=Metallocarboxypeptidase D; AltName: Full=Protein silver; Flags: Precursor gi|2827477|emb|CAA15634.1| EG:171D11.3 [Drosophila melanogaster] gi|10728354|gb|AAF45514.2| silver, isoform B [Drosophila melanogaster] gi|25137581|gb|AAN73046.1| carboxypeptidase D isoform 1B long tail-1 [Drosophila melanogaster]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 3   FSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSI 62
           F+SI +  L   V       +  D E FL+ PHY S ++L        +  P++ K+H +
Sbjct: 8   FASIGIAVLAMGVPHCRGYTIKED-ESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFL 66

Query: 63  GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           G+S++ R+L ALQISRN  S RNLL P  KY+AN+HGDE 
Sbjct: 67  GRSLEGRNLLALQISRNTRS-RNLLTPPVKYIANMHGDET 105

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45553831|ref|NP_996319.1| silver, isoform G [Drosophila melanogaster] gi|25137583|gb|AAN73047.1| carboxypeptidase D isoform 1B long tail-2 [Drosophila melanogaster] gi|45446763|gb|AAS65239.1| silver, isoform G [Drosophila melanogaster] gi|257286275|gb|ACV53084.1| LD28490p [Drosophila melanogaster]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 3   FSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSI 62
           F+SI +  L   V       +  D E FL+ PHY S ++L        +  P++ K+H +
Sbjct: 8   FASIGIAVLAMGVPHCRGYTIKED-ESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFL 66

Query: 63  GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           G+S++ R+L ALQISRN  S RNLL P  KY+AN+HGDE 
Sbjct: 67  GRSLEGRNLLALQISRNTRS-RNLLTPPVKYIANMHGDET 105

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45553847|ref|NP_996320.1| silver, isoform F [Drosophila melanogaster] gi|301598619|pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D Isoform 1b Short gi|301598620|pdb|3MN8|B Chain B, Structure Of Drosophila Melanogaster Carboxypeptidase D Isoform 1b Short gi|301598621|pdb|3MN8|C Chain C, Structure Of Drosophila Melanogaster Carboxypeptidase D Isoform 1b Short gi|301598622|pdb|3MN8|D Chain D, Structure Of Drosophila Melanogaster Carboxypeptidase D Isoform 1b Short gi|25137587|gb|AAN73049.1| carboxypeptidase D isoform 1B short [Drosophila melanogaster] gi|45446764|gb|AAS65240.1| silver, isoform F [Drosophila melanogaster] gi|261278417|gb|ACX61594.1| LP15968p [Drosophila melanogaster]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 3   FSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSI 62
           F+SI +  L   V       +  D E FL+ PHY S ++L        +  P++ K+H +
Sbjct: 8   FASIGIAVLAMGVPHCRGYTIKED-ESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFL 66

Query: 63  GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           G+S++ R+L ALQISRN  S RNLL P  KY+AN+HGDE 
Sbjct: 67  GRSLEGRNLLALQISRNTRS-RNLLTPPVKYIANMHGDET 105

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|974553|gb|AAA91650.1| carboxypeptidase precursor [Drosophila melanogaster]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 3   FSSISLCFLLCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSI 62
           F+SI +  L   V       +  D E FL+ PHY S ++L        +  P++ K+H +
Sbjct: 8   FASIGIAVLAMGVPHCRGYTIKED-ESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFL 66

Query: 63  GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           G+S++ R+L ALQISRN  S RNLL P  KY+AN+HGDE 
Sbjct: 67  GRSLEGRNLLALQISRNTRS-RNLLTPPVKYIANMHGDET 105

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
FB|FBgn0004648	1406	svr "silver" [Drosophila melan	0.735	0.053	0.473	5e-13
ZFIN|ZDB-GENE-081112-2	1350	cpda "carboxypeptidase D, a" [	0.647	0.048	0.439	3.9e-11
DICTYBASE|DDB_G0288963	544	DDB_G0288963 "peptidase M14 fa	0.813	0.152	0.372	1.6e-09
FB|FBgn0030778	527	CG4678 [Drosophila melanogaste	0.725	0.140	0.414	2.5e-09
UNIPROTKB|F8VVI6	136	CPM "Carboxypeptidase M" [Homo	0.784	0.588	0.409	2.9e-09
UNIPROTKB|A7MBD9	442	CPM "Uncharacterized protein"	0.588	0.135	0.524	4.9e-09
UNIPROTKB|F8W111	249	CPM "Carboxypeptidase M" [Homo	0.784	0.321	0.409	5.5e-09
RGD|1310532	443	Cpm "carboxypeptidase M" [Ratt	0.784	0.180	0.409	1.3e-08
MGI|MGI:1917824	443	Cpm "carboxypeptidase M" [Mus	0.784	0.180	0.409	1.7e-08
UNIPROTKB|P14384	443	CPM "Carboxypeptidase M" [Homo	0.784	0.180	0.409	2.2e-08

FB|FBgn0004648 svr "silver" [Drosophila melanogaster (taxid:7227)]

 Score = 186 (70.5 bits), Expect = 5.0e-13, P = 5.0e-13
 Identities = 36/76 (47%), Positives = 51/76 (67%)

Query:    26 DPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRN 85
             + E FL+ PHY S ++L        +  P++ K+H +G+S++ R+L ALQISRN  S RN
Sbjct:    30 EDESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRS-RN 88

Query:    86 LLKPMFKYVANIHGDE 101
             LL P  KY+AN+HGDE
Sbjct:    89 LLTPPVKYIANMHGDE 104

GO:0004181 "metallocarboxypeptidase activity" evidence=IDA;NAS

GO:0040003 "chitin-based cuticle development" evidence=NAS

GO:0006508 "proteolysis" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IDA

GO:0004180 "carboxypeptidase activity" evidence=IMP;IDA

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0007616 "long-term memory" evidence=IMP

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

ZFIN|ZDB-GENE-081112-2 cpda "carboxypeptidase D, a" [Danio rerio (taxid:7955)]

 Score = 168 (64.2 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 29/66 (43%), Positives = 48/66 (72%)

Query:    36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
             Y ++DELT+ L + A ++PS   L SIG+SV+ R+LW +++++++++     KP FKYV 
Sbjct:    46 YYNYDELTELLKSLAVKHPSIANLTSIGRSVEGRELWVMRVTKDISAADGTGKPKFKYVG 105

Query:    96 NIHGDE 101
             N+HGDE
Sbjct:   106 NMHGDE 111

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

DICTYBASE|DDB_G0288963 DDB_G0288963 "peptidase M14 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 32/86 (37%), Positives = 52/86 (60%)

Query:    19 TPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQIS- 77
             +P LV ++    ++  HYL++++LT F+   +   P++ KL+SIGKS   R+LWA+ +S 
Sbjct:   162 SPFLVRSE-SGIIDYNHYLNYNQLTDFMKKISNYYPNQSKLYSIGKSSLGRELWAIDLSN 220

Query:    78 -RNVASGRNLLKPMFKYVANIHGDEV 102
              +   +  N  K   K V N+HGDEV
Sbjct:   221 FQLKKNNNNKFKQNVKLVGNMHGDEV 246

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0030778 CG4678 [Drosophila melanogaster (taxid:7227)]

 Score = 146 (56.5 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 34/82 (41%), Positives = 50/82 (60%)

Query:    27 PEP--FLENPHYLSF-----DELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRN 79
             PEP  ++ +  +L F     +ELT+FL A + + P+   L+SIGKS+Q RDLW + +S +
Sbjct:    56 PEPRAYMPDAQHLDFVYHDHEELTRFLRATSARYPNLTALYSIGKSIQGRDLWVMVVSSS 115

Query:    80 VASGRNLLKPMFKYVANIHGDE 101
                   + KP  KYV NIHG+E
Sbjct:   116 PYE-HMVGKPDVKYVGNIHGNE 136

GO:0004185 "serine-type carboxypeptidase activity" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F8VVI6 CPM "Carboxypeptidase M" [Homo sapiens (taxid:9606)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 36/88 (40%), Positives = 47/88 (53%)

Query:    14 WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWA 73
             W+G   P++   D   F    +Y   + +  FL   AQ   S   LHSIGKSV+ R+LW 
Sbjct:     7 WLGLLLPLVAALD---F----NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWV 59

Query:    74 LQISRNVASGRNLLKPMFKYVANIHGDE 101
             L + R     R  + P FKYVAN+HGDE
Sbjct:    60 LVVGRFPKEHRIGI-PEFKYVANMHGDE 86

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A7MBD9 CPM "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 142 (55.0 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 32/61 (52%), Positives = 38/61 (62%)

Query:    41 ELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGD 100
             E+  FL   AQ   S   LHSIGKSVQ R+LW L + R+    R  + P FKYVAN+HGD
Sbjct:    27 EMEAFLKNVAQNYSSITHLHSIGKSVQGRNLWVLVVGRSPKEHRIGI-PEFKYVANMHGD 85

Query:   101 E 101
             E
Sbjct:    86 E 86

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

UNIPROTKB|F8W111 CPM "Carboxypeptidase M" [Homo sapiens (taxid:9606)]

 Score = 136 (52.9 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 36/88 (40%), Positives = 47/88 (53%)

Query:    14 WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWA 73
             W+G   P++   D   F    +Y   + +  FL   AQ   S   LHSIGKSV+ R+LW 
Sbjct:     7 WLGLLLPLVAALD---F----NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWV 59

Query:    74 LQISRNVASGRNLLKPMFKYVANIHGDE 101
             L + R     R  + P FKYVAN+HGDE
Sbjct:    60 LVVGRFPKEHRIGI-PEFKYVANMHGDE 86

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

RGD|1310532 Cpm "carboxypeptidase M" [Rattus norvegicus (taxid:10116)]

 Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 36/88 (40%), Positives = 48/88 (54%)

Query:    14 WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWA 73
             W+G   PV+   D   F     Y   + +  FL + AQ   S   LHSIGKSV+ R+LW 
Sbjct:     7 WLGLLLPVVAALD---F----RYHHQEGMEAFLKSVAQNYSSITHLHSIGKSVRGRNLWV 59

Query:    74 LQISRNVASGRNLLKPMFKYVANIHGDE 101
             L + ++    R  + P FKYVAN+HGDE
Sbjct:    60 LVVGQSPKEHRVGI-PEFKYVANMHGDE 86

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

MGI|MGI:1917824 Cpm "carboxypeptidase M" [Mus musculus (taxid:10090)]

 Score = 137 (53.3 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 36/88 (40%), Positives = 47/88 (53%)

Query:    14 WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWA 73
             W+G   PV+   D   F     Y   + +  FL + AQ   S   LHSIGKSV+ R+LW 
Sbjct:     7 WLGLLLPVVAALD---F----RYHHQEGMEAFLKSVAQNYSSITHLHSIGKSVRGRNLWV 59

Query:    74 LQISRNVASGRNLLKPMFKYVANIHGDE 101
             L + +     R  + P FKYVAN+HGDE
Sbjct:    60 LVVGQTPKEHRVGI-PEFKYVANMHGDE 86

GO:0003674 "molecular_function" evidence=ND

GO:0004180 "carboxypeptidase activity" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008233 "peptidase activity" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0031225 "anchored to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|P14384 CPM "Carboxypeptidase M" [Homo sapiens (taxid:9606)]

 Score = 136 (52.9 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 36/88 (40%), Positives = 47/88 (53%)

Query:    14 WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWA 73
             W+G   P++   D   F    +Y   + +  FL   AQ   S   LHSIGKSV+ R+LW 
Sbjct:     7 WLGLLLPLVAALD---F----NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWV 59

Query:    74 LQISRNVASGRNLLKPMFKYVANIHGDE 101
             L + R     R  + P FKYVAN+HGDE
Sbjct:    60 LVVGRFPKEHRIGI-PEFKYVANMHGDE 86

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0031225 "anchored to membrane" evidence=IEA

GO:0004180 "carboxypeptidase activity" evidence=TAS

GO:0009653 "anatomical structure morphogenesis" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	102
cd03868	293	cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase	5e-26
cd03858	293	cd03858, M14_CP_N-E_like, Peptidase M14 carboxypep	1e-22
smart00631	277	smart00631, Zn_pept, Zn_pept domain	2e-19
cd03859	297	cd03859, M14_CPT, Peptidase M14 Carboxypeptidase T	1e-15
pfam00246	277	pfam00246, Peptidase_M14, Zinc carboxypeptidase	2e-15
cd06905	360	cd06905, M14-like_8, Peptidase M14-like domain; un	3e-15
cd03863	296	cd03863, M14_CPD_II, Peptidase M14 carboxypeptidas	3e-11
cd03866	292	cd03866, M14_CPM, Peptidase M14 carboxypeptidase s	5e-11
cd03860	293	cd03860, M14_CP_A-B_like, Peptidase M14 carboxypep	2e-10
cd03864	313	cd03864, M14_CPN, Peptidase M14 carboxypeptidase s	4e-10
cd06245	284	cd06245, M14_CPD_III, Peptidase M14 carboxypeptida	2e-08
cd03867	315	cd03867, M14_CPZ, Peptidase M14 carboxypeptidase s	4e-08
cd03865	323	cd03865, M14_CPE, Peptidase M14 carboxypeptidase s	1e-07
cd03869	326	cd03869, M14_CPX_like, Peptidase M14 carboxypeptid	8e-07
cd06248	303	cd06248, M14_CP_A-B_like_1, Peptidase M14 carboxyp	3e-05

>gnl|CDD|199850 cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup

 Score = 97.0 bits (242), Expect = 5e-26
 Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y  +DELT  L +  +  P   +LHSIG+SV+ RDLWAL+IS NV S R   +PMFKYV 
Sbjct: 1   YHHYDELTDLLASLEKAYPDIARLHSIGRSVEGRDLWALRISDNVNS-REPGRPMFKYVG 59

Query: 96  NIHGDEV 102
           N+HGDE 
Sbjct: 60  NMHGDET 66

The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. This Domain I family contains two contiguous surface cysteines that may become palmitoylated and target the enzyme to membranes, thus regulating intracellular trafficking. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down-regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. In D. melanogaster, the CPD variant 1B short (DmCPD1Bs) is necessary and sufficient for viability of the fruit fly. Length = 293

>gnl|CDD|199842 cd03858, M14_CP_N-E_like, Peptidase M14 carboxypeptidase subfamily N/E-like

 Score = 88.4 bits (220), Expect = 1e-22
 Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           + +++EL  FL    ++ P+  +L+SIGKSV+ R LW L+IS N        +P FKYV 
Sbjct: 1   HHNYEELEAFLKKLNKKYPNITRLYSIGKSVEGRPLWVLEISDNPGE-HEPGEPEFKYVG 59

Query: 96  NIHGDEV 102
           N+HG+EV
Sbjct: 60  NMHGNEV 66

Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. Length = 293

>gnl|CDD|214748 smart00631, Zn_pept, Zn_pept domain

 Score = 79.7 bits (197), Expect = 2e-19
 Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y S++E+  +L   A + P  V+L SIGKSV+ R +W L+IS   +      KP     A
Sbjct: 1   YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISNGGSHD----KPAIFIDA 56

Query: 96  NIHGDEV 102
            IH  E 
Sbjct: 57  GIHAREW 63

Length = 277

>gnl|CDD|199843 cd03859, M14_CPT, Peptidase M14 Carboxypeptidase T subfamily

 Score = 69.3 bits (170), Expect = 1e-15
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y ++ E+   L AAA   P+ VK+ SIGKS + RD+WA++IS N A+  N  KP   Y +
Sbjct: 4   YHNYLEMVDELNAAAAAYPNLVKVKSIGKSYEGRDIWAVKISDNPATDEN--KPEVLYTS 61

Query: 96  NIHGDEV 102
             H  E 
Sbjct: 62  THHAREW 68

Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor. Length = 297

>gnl|CDD|215816 pfam00246, Peptidase_M14, Zinc carboxypeptidase

 Score = 68.9 bits (169), Expect = 2e-15
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 42  LTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDE 101
           +  +L A A   P  V+L SIGKSV+ R L  L+IS+         KP     A IH  E
Sbjct: 1   IEAWLDALAAAYPDLVRLVSIGKSVEGRPLLVLKISKGPHGPG---KPAVLIDAGIHARE 57

Query: 102 V 102
            
Sbjct: 58  W 58

Length = 277

>gnl|CDD|199875 cd06905, M14-like_8, Peptidase M14-like domain; uncharacterized subfamily

 Score = 69.0 bits (169), Expect = 3e-15
 Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y  +DELT FL A A   P  + L SIGKS + RD+W L ++ N A+G    KP F   
Sbjct: 3   RYYRYDELTAFLQAWASAYPHLISLESIGKSYEGRDIWLLTLT-NQATGPAREKPAFWID 61

Query: 95  ANIHGDEV 102
           ANIH  EV
Sbjct: 62  ANIHASEV 69

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 360

>gnl|CDD|199845 cd03863, M14_CPD_II, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup

 Score = 57.7 bits (139), Expect = 3e-11
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            +  F ++  FL   A + PS  +L+S+GKSV+ R+L+ ++IS N        +P FKY+
Sbjct: 7   RHHHFSDMEIFLRRFANEYPSITRLYSVGKSVELRELYVMEISDNPGV-HEAGEPEFKYI 65

Query: 95  ANIHGDEV 102
            N+HG+EV
Sbjct: 66  GNMHGNEV 73

The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 296

>gnl|CDD|199848 cd03866, M14_CPM, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup

 Score = 56.8 bits (137), Expect = 5e-11
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 45  FLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           +L    +   S   LHSIG+SV+ R+LW L + ++    R  + P FKYVAN+HG+EV
Sbjct: 14  YLKDVNKNYSSITHLHSIGQSVEGRELWVLVLGQHPREHRIGI-PEFKYVANMHGNEV 70

Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the control of peptide hormones and growth factor activity on the cell surface and in the membrane-localized degradation of extracellular proteins, for example it hydrolyses the C-terminal arginine of epidermal growth factor (EGF) resulting in des-Arg-EGF which binds to the EGF receptor (EGFR) with an equal or greater affinity than native EGF. CPM is a required processing enzyme that generates specific agonists for the B1 receptor. Length = 292

>gnl|CDD|199844 cd03860, M14_CP_A-B_like, Peptidase M14 carboxypeptidase subfamily A/B-like

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y ++DE+  +L   AQ+ P  V + +IG+S + R +  L+IS    S     KP     A
Sbjct: 1   YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGLKISNGGRSN----KPAIFIDA 56

Query: 96  NIHGDE 101
            IH  E
Sbjct: 57  GIHARE 62

The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues. Length = 293

>gnl|CDD|199846 cd03864, M14_CPN, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup

 Score = 54.5 bits (131), Expect = 4e-10
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 39  FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH 98
           +D+L + L A   + P   +++SIG+SV+ R L+ L+ S N       L+P FKYV N+H
Sbjct: 4   YDDLVRALFAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGI-HEPLEPEFKYVGNMH 62

Query: 99  GDEV 102
           G+EV
Sbjct: 63  GNEV 66

Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates include peptides found in the bloodstream, such as kinins (e.g. bradykinin, kalinin, met-lys-bradykinin), complement anaphylatoxins and creatine kinase MM (CK-MM). By removing just one amino acid, CPN can alter peptide activity and receptor binding. For example Bradykinin, a nine-residue peptide released from kiningen in response to tissue injury which is inactivated by CPN, anaphylatoxins which are regulated by CPN by the cleaving and removal of their C-terminal arginines resulting in a reduction in their biological activities of 10-100-fold, and creatine kinase MM, a cytosolic enzyme that catalyzes the reversible transfer of a phosphate group from ATP to creatine, and is regulated by CPN by the cleavage of C-terminal lysines. Like the other N/E subfamily members, two surface loops surrounding the active-site groove restrict access to the catalytic center, thus restricting larger protein carboxypeptidase inhibitors from inhibiting CPN. Length = 313

>gnl|CDD|199867 cd06245, M14_CPD_III, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup

 Score = 49.1 bits (117), Expect = 2e-08
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y S+ EL++FL       P    L S+G+SV+ R + +L+IS N  +     +P  ++V
Sbjct: 1   RYHSYKELSEFLRGLVLNYPHITNLTSLGQSVEFRHILSLEIS-NKPNNSEPEEPKIRFV 59

Query: 95  ANIHGDE 101
           A IHG+ 
Sbjct: 60  AGIHGNA 66

The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 284

>gnl|CDD|199849 cd03867, M14_CPZ, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup

 Score = 48.7 bits (116), Expect = 4e-08
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           + S+ ++   L   A +     + +SIG+S + RDL  ++ S N      LL+P  KY+ 
Sbjct: 1   HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPGQ-HELLEPEVKYIG 59

Query: 96  NIHGDEV 102
           N+HG+EV
Sbjct: 60  NMHGNEV 66

Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling. Length = 315

>gnl|CDD|199847 cd03865, M14_CPE, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y  + EL + LV+   Q PS  +++++G+S + R+L  +++S N        +P FKYV 
Sbjct: 5   YHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPGE-HEPGEPEFKYVG 63

Query: 96  NIHGDE 101
           N+HG+E
Sbjct: 64  NMHGNE 69

Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine peptides that result in obesity and hyperglycemia. Reduced CPE enzyme and receptor activity could underlie abnormal placental phenotypes from the observation that CPE is down-regulated in enlarged placentas of interspecific hybrid (interspecies hybrid placental dysplasia, IHPD) and cloned mice. Length = 323

>gnl|CDD|199851 cd03869, M14_CPX_like, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup

 Score = 44.8 bits (106), Expect = 8e-07
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 38  SFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANI 97
           ++ ++ + +    ++ P+  +++SIGKS Q   L+A++IS N      L +P F+Y A +
Sbjct: 7   NYKDMRQLMKVVNEECPNITRIYSIGKSYQGLKLYAMEISDNPGE-HELGEPEFRYTAGM 65

Query: 98  HGDEV 102
           HG+EV
Sbjct: 66  HGNEV 70

Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Proteins in this subgroup also contain an N-terminal discoidin domain. The CP domain is important for the function of AEBP1 as a transcriptional repressor. AEBP1 is involved in several biological processes including adipogenesis, macrophage cholesterol homeostasis, and inflammation. In macrophages, AEBP1 promotes the expression of IL-6, TNF-alpha, MCP-1, and iNOS whose expression is tightly regulated by NF-kappaB activity. ACLP, a secreted protein that associates with the extracellular matrix, is essential for abdominal wall development and contributes to dermal wound healing. Length = 326

>gnl|CDD|199869 cd06248, M14_CP_A-B_like_1, Peptidase M14 carboxypeptidase subfamily A/B-like; uncharacterized subgroup

 Score = 40.7 bits (96), Expect = 3e-05
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y   ++  ++L       PS  +L +IGKS + R +  + I  +   G+   KP      
Sbjct: 4   YHPLEDHLQWLRDLQAAFPSNSELFTIGKSYEGRTITGIHIWGS--GGKG-SKPAIVIHG 60

Query: 96  NIHGDE 101
            +H  E
Sbjct: 61  TVHARE 66

The Peptidase M14 Carboxypeptidase A/B-like subfamily is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4, detected in hormone-regulated tissues, is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
cd06245	363	M14_CPD_III The third carboxypeptidase (CP)-like d	99.81
cd03869	405	M14_CPX_like Peptidase M14-like domain of carboxyp	99.8
cd03865	402	M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C	99.8
cd03863	375	M14_CPD_II The second carboxypeptidase (CP)-like d	99.79
cd03867	395	M14_CPZ Peptidase M14-like domain of carboxypeptid	99.79
cd06246	300	M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (C	99.79
cd03871	300	M14_CPB Peptidase M14 Carboxypeptidase B (CPB) bel	99.78
cd06905	360	Peptidase_M14-like_8 A functionally uncharacterize	99.78
cd06247	298	M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO	99.78
cd03868	372	M14_CPD_I The first carboxypeptidase (CP)-like dom	99.78
cd03866	376	M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM	99.77
cd06248	304	M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/	99.77
cd03870	301	M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA	99.77
cd03864	392	M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als	99.77
cd03859	295	M14_CPT Peptidase M14-like domain of carboxypeptid	99.75
cd03858	374	M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub	99.75
cd03872	300	M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also know	99.75
KOG2650|consensus	418		99.72
cd03860	294	M14_CP_A-B_like The Peptidase M14 Carboxypeptidase	99.7
smart00631	277	Zn_pept Zn_pept.	99.69
cd06242	268	Peptidase_M14-like_1_5 Peptidase M14-like domain o	99.69
KOG2649|consensus	500		99.64
PF00246	279	Peptidase_M14: Zinc carboxypeptidase This is famil	99.59
cd06227	272	Peptidase_M14-like_2 A functionally uncharacterize	99.57
cd06237	244	M14_Nna1_like_3 A bacterial subgroup of the Peptid	99.48
cd06234	263	M14_Nna1_like_1 A bacterial subgroup of the Peptid	99.41
cd06241	266	Peptidase_M14-like_1_4 Peptidase M14-like domain o	99.4
cd06908	261	M14_AGBL4_like Peptidase M14-like domain of ATP/GT	99.38
cd06226	293	M14_CPT_like Peptidase M14-like domain of an uncha	99.25
cd06239	231	Peptidase_M14-like_1_2 Peptidase M14-like domain o	99.2
cd03856	269	M14_Nna1_like Peptidase M14-like domain of Nna-1 (	99.09
cd06240	273	Peptidase_M14-like_1_3 Peptidase M14-like domain o	98.97
cd06235	258	M14_Nna1_like_2 Subgroup of the Peptidase M14-like	98.94
cd06243	236	Peptidase_M14-like_1_6 Peptidase M14-like domain o	98.92
cd03857	226	Peptidase_M14-like_1 Peptidase M14-like domain of	98.91
cd06907	261	M14_AGBL2-3_like Peptidase M14-like domain of ATP/	98.89
cd06236	304	M14_AGBL5_like Peptidase M14-like domain of ATP/GT	98.75
cd06228	332	Peptidase_M14-like_3 A functionally uncharacterize	98.72
cd06238	271	Peptidase_M14-like_1_1 Peptidase M14-like domain o	98.59
PRK10602	237	murein peptide amidase A; Provisional	98.57
cd06244	268	Peptidase_M14-like_1_7 Peptidase M14-like domain o	98.42
cd06232	240	Peptidase_M14-like_5 Peptidase M14-like domain of	98.38
cd06906	278	M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervo	98.32
cd06231	236	Peptidase_M14-like_4 A functionally uncharacterize	98.03
cd03862	273	Peptidase_M14-like_7 A functionally uncharacterize	97.22
COG2866	374	Predicted carboxypeptidase [Amino acid transport a	96.1
KOG3641|consensus	650		95.54
cd06250	359	M14_PaAOTO_like An uncharacterized subgroup of the	95.2
cd06255	293	M14_ASTE_ASPA_like_5 A functionally uncharacterize	94.64
cd06252	316	M14_ASTE_ASPA_like_2 A functionally uncharacterize	94.2
cd06251	287	M14_ASTE_ASPA_like_1 A functionally uncharacterize	94.17
cd06233	283	Peptidase_M14-like_6 Peptidase M14-like domain of	94.17
cd03855	322	M14_ASTE Peptidase M14 Succinylglutamate desucciny	92.52
TIGR02994	325	ectoine_eutE ectoine utilization protein EutE. Mem	92.2
PRK05324	329	succinylglutamate desuccinylase; Provisional	92.19
COG2988	324	Succinylglutamate desuccinylase [Amino acid transp	91.38
TIGR03242	319	arg_catab_astE succinylglutamate desuccinylase. Me	91.22
cd06256	327	M14_ASTE_ASPA_like_6 A functionally uncharacterize	91.05
COG3608	331	Predicted deacylase [General function prediction o	88.13
cd06229	255	M14_Endopeptidase_I Peptidase M14-like domain of G	86.35

>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.81  E-value=8.2e-20  Score=139.21  Aligned_cols=67  Identities=31%  Similarity=0.545  Sum_probs=62.4

Q ss_pred             CCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        35 ~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ ...++||.|+++|+|||||.
T Consensus         1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~~~-~~~~~kp~v~~~~giHg~E~   67 (363)
T cd06245           1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNKPN-NSEPEEPKIRFVAGIHGNAP   67 (363)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCCCC-CCCCCCCEEEEECCccCCcH
Confidence            59999999999999999999999999999999999999999998664 45668999999999999995

4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a

>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.80  E-value=1.7e-19  Score=138.92  Aligned_cols=68  Identities=31%  Similarity=0.556  Sum_probs=63.0

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ .+..+||.|+++|+|||||.
T Consensus         3 f~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~~~-~~~~~kP~v~~~g~iHgrE~   70 (405)
T cd03869           3 FKHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPG-EHELGEPEFRYVAGMHGNEV   70 (405)
T ss_pred             CccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecCCc-cccCCCCeEEEEcccCCCcH
Confidence            478999999999999999999999999999999999999999998765 45568999999999999994

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro

>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3

Probab=99.80  E-value=2.6e-19  Score=137.84  Aligned_cols=68  Identities=32%  Similarity=0.564  Sum_probs=63.4

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ ...++||.|+++|+|||||.
T Consensus         3 f~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~~~-~~~~~kP~v~i~g~iHg~E~   70 (402)
T cd03865           3 FEYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPG-EHEPGEPEFKYIGNMHGNEA   70 (402)
T ss_pred             cccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecCCC-CCCCCCCEEEEECCcCCCcH
Confidence            589999999999999999999999999999999999999999998665 55668999999999999994

4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe

>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.79  E-value=3.9e-19  Score=135.98  Aligned_cols=68  Identities=38%  Similarity=0.588  Sum_probs=62.7

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ ...++||+|+++|+|||||.
T Consensus         4 f~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~~~-~~~~~kp~v~~~g~iHg~E~   71 (375)
T cd03863           4 FRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPG-IHEPGEPEFKYIGNMHGNEV   71 (375)
T ss_pred             CccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecCCC-cccCCCCeEEEEccccCCcH
Confidence            478999999999999999999999999999999999999999998664 45568999999999999994

4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac

>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.79  E-value=4.2e-19  Score=136.53  Aligned_cols=66  Identities=33%  Similarity=0.560  Sum_probs=61.4

Q ss_pred             CCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ +....||+|+++|||||||.
T Consensus         1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~~~-~~~~~kp~v~i~~giHg~E~   66 (395)
T cd03867           1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPG-QHELLEPEVKYIGNMHGNEV   66 (395)
T ss_pred             CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccCCC-cccccCCeEEEEccccCCcH
Confidence            8999999999999999999999999999999999999999998665 45567999999999999994

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.

>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.79  E-value=5.8e-19  Score=131.62  Aligned_cols=66  Identities=21%  Similarity=0.319  Sum_probs=61.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        33 ~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |++||+|+||.+||++|+++||+++++.+||+|+|||+|++++|++++    +..||+||++|||||||.
T Consensus         2 ~~~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~~----~~~k~~v~i~~giHarE~   67 (300)
T cd06246           2 YEQYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGKE----QTAKNAIWIDCGIHAREW   67 (300)
T ss_pred             CCccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCCC----CCCCCeEEEecccCccch
Confidence            689999999999999999999999999999999999999999999743    346899999999999994

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil

>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.78  E-value=5.5e-19  Score=131.79  Aligned_cols=66  Identities=18%  Similarity=0.368  Sum_probs=61.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++++||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.     ..||+||++||+||||.
T Consensus         2 ~~~~Y~~~~ei~~~l~~la~~~p~~v~~~~IG~S~eGR~i~~l~i~~~~-----~~kp~v~i~~giHarE~   67 (300)
T cd03871           2 SYEKYNNWETIEAWTEQVASENPDLISRSQIGTTFEGRPIYLLKVGKPG-----VNKPAIFMDCGFHAREW   67 (300)
T ss_pred             CccccCCHHHHHHHHHHHHHHCCCceEEEEeeeCCCCCeeEEEEEccCC-----CCCCeEEEecccccccc
Confidence            5789999999999999999999999999999999999999999999742     46899999999999994

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.

>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.78  E-value=7.4e-19  Score=133.86  Aligned_cols=69  Identities=42%  Similarity=0.610  Sum_probs=62.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        33 ~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |++|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.. .....||.|||.|+|||||.
T Consensus         1 ~~~Y~ty~ei~~~L~~La~~~P~lv~l~~IG~S~EGR~I~~l~Is~~~~-~~~~~Kp~I~i~~giHarEw   69 (360)
T cd06905           1 FSRYYRYDELTAALQAWASAYPQLCSLESIGKSYEGRDIWLLTLTNQAT-GPDREKPAFWIDANIHATEV   69 (360)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEecCCCC-CCCCCCcEEEEecCCCCCch
Confidence            5789999999999999999999999999999999999999999997543 34467999999999999994

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3

Probab=99.78  E-value=8.7e-19  Score=130.63  Aligned_cols=66  Identities=20%  Similarity=0.283  Sum_probs=60.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        33 ~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |++||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.    ..+||.||++|+|||||.
T Consensus         1 ~~~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~~----~~~k~~i~i~~giHarEw   66 (298)
T cd06247           1 YTKYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWPS----DKPKKIIWMDCGIHAREW   66 (298)
T ss_pred             CCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecCC----CCCCcEEEEecccccccc
Confidence            578999999999999999999999999999999999999999999743    246889999999999994

4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.

>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.78  E-value=1e-18  Score=133.36  Aligned_cols=66  Identities=50%  Similarity=0.897  Sum_probs=61.2

Q ss_pred             CCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+|+||.+||++|+++||+++++.+||+|+|||+|++++|++++. .....||+|+++|+|||||+
T Consensus         1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~~~-~~~~~kp~v~~~~~iH~~E~   66 (372)
T cd03868           1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDNVN-RREPGEPMFKYVGNMHGDET   66 (372)
T ss_pred             CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecCCC-CCCCCCCeEEEECCcCCCcH
Confidence            8999999999999999999999999999999999999999998654 44567999999999999995

4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p

>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.77  E-value=1.1e-18  Score=133.58  Aligned_cols=68  Identities=40%  Similarity=0.692  Sum_probs=62.8

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|++++. +....||.|+++|+|||||.
T Consensus         3 ~~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~~~-~~~~~~P~v~~~~~iHg~E~   70 (376)
T cd03866           3 FNYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRFPR-EHRIGIPEFKYVANMHGNEV   70 (376)
T ss_pred             cccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccCCc-cccCCCCeEEEEcccCCCcH
Confidence            589999999999999999999999999999999999999999998654 44567999999999999994

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont

>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E

Probab=99.77  E-value=1.4e-18  Score=129.76  Aligned_cols=68  Identities=22%  Similarity=0.312  Sum_probs=62.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        33 ~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |++||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.+  .+..||+|+++|+|||||.
T Consensus         1 ~~~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~--~~~~k~~v~i~~giHarE~   68 (304)
T cd06248           1 FDSYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSGG--EKGSKPAIVIHGTVHAREW   68 (304)
T ss_pred             CCccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCCC--CCCCCcEEEEECCcCcCcc
Confidence            5789999999999999999999999999999999999999999997542  2457899999999999994

Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,

>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.77  E-value=1.4e-18  Score=129.68  Aligned_cols=66  Identities=26%  Similarity=0.392  Sum_probs=61.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|.+|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.     ..||+|+++||+||||.
T Consensus         2 ~~~~Y~~~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~I~~l~is~~~-----~~kp~v~i~~giHarE~   67 (301)
T cd03870           2 NYATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTGG-----SNRPAIWIDAGIHSREW   67 (301)
T ss_pred             CccccCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEEecCC-----CCCceEEEeccccccch
Confidence            5789999999999999999999999999999999999999999999753     26899999999999994

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p

>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3

Probab=99.77  E-value=1.4e-18  Score=133.55  Aligned_cols=66  Identities=39%  Similarity=0.649  Sum_probs=61.6

Q ss_pred             CCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ ...+.||+|+++|+|||||.
T Consensus         1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~~~-~~~~~kp~v~~~g~iHg~E~   66 (392)
T cd03864           1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPG-IHEPLEPEFKYVGNMHGNEV   66 (392)
T ss_pred             CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCCCc-cccCCCCEEEEEcccCCCcH
Confidence            7999999999999999999999999999999999999999998765 55668999999999999994

4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu

>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.75  E-value=5e-18  Score=126.08  Aligned_cols=67  Identities=39%  Similarity=0.479  Sum_probs=61.7

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+|++|+||.++|++|+++||+++++.+||+|+|||+|++++|++++.  ....||+|+++|+|||||.
T Consensus         2 ~~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~--~~~~kp~i~i~~~iH~~E~   68 (295)
T cd03859           2 RGYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNVA--TDENKPEVLYTSTHHAREW   68 (295)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCCC--CCCCCCEEEEECCcCccch
Confidence            579999999999999999999999999999999999999999998652  3457999999999999995

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.

>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.75  E-value=4.3e-18  Score=129.74  Aligned_cols=66  Identities=50%  Similarity=0.787  Sum_probs=61.0

Q ss_pred             CCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ .....||+|+++|++||||.
T Consensus         1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~-~~~~~kp~v~i~agiH~~E~   66 (374)
T cd03858           1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDNPG-VHEPGEPEFKYVGNMHGNEV   66 (374)
T ss_pred             CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecCCC-CCCCCCceEEEeccccCCch
Confidence            8999999999999999999999999999999999999999998654 34458999999999999995

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr

>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3

Probab=99.75  E-value=3.8e-18  Score=127.30  Aligned_cols=64  Identities=25%  Similarity=0.405  Sum_probs=59.1

Q ss_pred             CCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        35 ~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.    +..||.||++|||||||.
T Consensus         1 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~~----~~~k~~i~i~~giHarEw   64 (300)
T cd03872           1 VYHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKRT----RSYKKAVWIDCGIHAREW   64 (300)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecCC----CCCCCeEEEecccccccc
Confidence            3899999999999999999999999999999999999999999753    246899999999999994

4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse

>KOG2650|consensus

Probab=99.72  E-value=9.5e-18  Score=129.59  Aligned_cols=66  Identities=33%  Similarity=0.380  Sum_probs=62.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDE  101 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E  101 (102)
                      .|..||+++||.+||+.|+.+||++|++..||+|+|||+|.+++|+.+.    ...||+||++|||||||
T Consensus       117 ~~~~Y~~le~I~~~l~~l~~~~P~~v~~~~IG~s~EgR~i~~lkIs~~~----~~~k~~I~id~GiHARE  182 (418)
T KOG2650|consen  117 NWERYHSLEEIYEWLDNLAERYPDLVSLIHIGRSYEGRPLKVLKISGGD----NRNKKAIFIDAGIHARE  182 (418)
T ss_pred             cHHHhcCHHHHHHHHHHHHHhCCCceEEEEcccccCCceEEEEEecCCC----CCCCceEEEecchhHHh
Confidence            7899999999999999999999999999999999999999999999753    35789999999999998

>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily

Probab=99.70  E-value=5.6e-17  Score=120.30  Aligned_cols=63  Identities=32%  Similarity=0.444  Sum_probs=58.9

Q ss_pred             CCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||||+||.+||++|+++||+++++.+||+|+|||+|++++|+++.    ...||+|+++|++||||.
T Consensus         1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~----~~~k~~v~i~~~~Hg~E~   63 (294)
T cd03860           1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGG----RSNKPAIFIDAGIHAREW   63 (294)
T ss_pred             CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCC----CCCCcEEEEECCcCcCcc
Confidence            899999999999999999999999999999999999999999853    346899999999999995

CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the

>smart00631 Zn_pept Zn_pept

Probab=99.69  E-value=8.5e-17  Score=118.35  Aligned_cols=63  Identities=40%  Similarity=0.585  Sum_probs=58.6

Q ss_pred             CCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |++|+||.++|++|+++||+++++.+||+|++||+|++++|++++    ...||+|+|+|++||||.
T Consensus         1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~----~~~k~~v~i~a~~Hg~E~   63 (277)
T smart00631        1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGG----SHNKPAIFIDAGIHAREW   63 (277)
T ss_pred             CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCC----CCCCcEEEEECCcccccc
Confidence            799999999999999999999999999999999999999999753    235899999999999995

>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.69  E-value=1.1e-16  Score=117.79  Aligned_cols=67  Identities=24%  Similarity=0.244  Sum_probs=58.8

Q ss_pred             CCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +.+|+||.+||++|++++|.+.++.++|+|+|||+|++++|+++++......||+||+.|||||+|+
T Consensus         2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~   68 (268)
T cd06242           2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEP   68 (268)
T ss_pred             CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCH
Confidence            6799999999999999999877799999999999999999997542112467899999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>KOG2649|consensus

Probab=99.64  E-value=4.5e-16  Score=121.09  Aligned_cols=70  Identities=37%  Similarity=0.611  Sum_probs=67.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      -...||+|++|.++|+++..+||.+.++++||||+|||+||++.|++.++ .+..++|.+.++|+|||||+
T Consensus        65 l~f~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd~Pg-eH~~gePEfKyv~nmHGnE~  134 (500)
T KOG2649|consen   65 LTFGHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISDRPG-EHEPGEPEFKYIGNMHGNEV  134 (500)
T ss_pred             ccCCCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCCCCC-cccCCCCcceeeeecccccc
Confidence            35689999999999999999999999999999999999999999999998 89999999999999999996

>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification

Probab=99.59  E-value=5.3e-15  Score=108.25  Aligned_cols=60  Identities=40%  Similarity=0.597  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          42 LTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        42 i~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |.+||++|+++||+++++.+||+|++||+|++++|+++.. .....||+|+|+|++||+|+
T Consensus         1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~-~~~~~k~~v~i~~~~Hg~E~   60 (279)
T PF00246_consen    1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNSN-GSDPGKPTVLIIAGIHGNEW   60 (279)
T ss_dssp             HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSSTT-TTSTTSEEEEEEE-SSTT-T
T ss_pred             CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeecccc-cccccccceEEEeccccccc
Confidence            6899999999999999999999999999999999998643 45678999999999999995

; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....

>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.57  E-value=9e-15  Score=107.92  Aligned_cols=64  Identities=19%  Similarity=0.155  Sum_probs=57.6

Q ss_pred             CCC-HHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          36 YLS-FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        36 y~~-~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+ ++||.+||++|+++||+ +++..+|+|+|||+|++++|+.+.+  ....||+||+.||+||||.
T Consensus         2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~~~--~~~~k~~i~i~agiHarE~   66 (272)
T cd06227           2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPNGD--PSKKKVKALLLFGEHAREL   66 (272)
T ss_pred             ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCCCC--CCCCCCEEEEECCccCCch
Confidence            899 99999999999999999 8999999999999999999997542  1146899999999999994

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins

Probab=99.48  E-value=1.1e-13  Score=100.79  Aligned_cols=60  Identities=23%  Similarity=0.264  Sum_probs=53.2

Q ss_pred             CCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        35 ~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ...+++++.+||++|++.  +++++.+||+|+|||||++++|++++      .||.|++.|++||+|.
T Consensus         6 ~~~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~~~------~k~~v~i~~~iH~~E~   65 (244)
T cd06237           6 ELIDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGNPD------SKEWIVVISRQHPPEV   65 (244)
T ss_pred             eeCCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecCCC------CCceEEEEcCcCCCcH
Confidence            457899999999999766  57999999999999999999998643      4789999999999994

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins

Probab=99.41  E-value=8.7e-13  Score=97.05  Aligned_cols=61  Identities=25%  Similarity=0.310  Sum_probs=53.0

Q ss_pred             CCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        35 ~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .=++|+++.+|++.+++. + .+++.++|+|+|||+|++++|++..     .+||.|||+|++||+|+
T Consensus         9 ~Pys~~~~~~~l~~~~~~-~-~v~~~~iG~S~eGR~i~~l~I~~~~-----~~k~~V~i~a~iH~~E~   69 (263)
T cd06234           9 APYSYERHLALIARAQGA-P-DVRLEVLGQTVQGRDIDLLTFGEPG-----PGKKKLWIIARQHPGET   69 (263)
T ss_pred             CCCCHHHHHHHHHHHhcC-C-CeEEEEEEEcCCCCeEEEEEEccCC-----CCCCEEEEECCCCCCcH
Confidence            346899999999999863 3 6999999999999999999998732     36899999999999994

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.40  E-value=6.6e-13  Score=97.73  Aligned_cols=58  Identities=33%  Similarity=0.460  Sum_probs=49.3

Q ss_pred             HHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCC----CCCCCCceEEEEccccCCCC
Q psy7680          44 KFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVAS----GRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        44 ~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~----~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|+++|++++| .+++++||+|.|||+|++++|+++...    ....+||+||+.|||||+|+
T Consensus         1 a~~~~La~~~~-~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~   62 (266)
T cd06241           1 AFLERLAAASP-LIRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEI   62 (266)
T ss_pred             CHHHHHHHhCC-ceEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCc
Confidence            48999999997 589999999999999999999975421    12357999999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins

Probab=99.38  E-value=1e-12  Score=96.59  Aligned_cols=57  Identities=25%  Similarity=0.226  Sum_probs=49.0

Q ss_pred             HHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          46 LVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        46 l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |++|+++||+.+++.+||+|+|||+|++++|+++.+......||.|||+|++|+||.
T Consensus         1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~   57 (261)
T cd06908           1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGES   57 (261)
T ss_pred             ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCCh
Confidence            467899999999999999999999999999997542122357899999999999995

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins

Probab=99.25  E-value=1.3e-11  Score=92.00  Aligned_cols=50  Identities=26%  Similarity=0.385  Sum_probs=43.5

Q ss_pred             CCCCeEEEEccccC------CCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          53 NPSKVKLHSIGKSV------QNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        53 ~p~~v~~~~iG~S~------eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+++++.+||+|+      |||+|++|+|+++........||+||++|+|||||.
T Consensus         1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~   56 (293)
T cd06226           1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREY   56 (293)
T ss_pred             CCcceEEEEeeEecccCcccCCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcH
Confidence            79999999999999      999999999998653113568999999999999994

This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.

>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.20  E-value=3.2e-11  Score=87.36  Aligned_cols=46  Identities=28%  Similarity=0.507  Sum_probs=41.9

Q ss_pred             HHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          49 AAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        49 la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +.+++|++++++.+|+|++||||++++|+++        ||+|+++|++||||+
T Consensus         2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~g--------~~~vli~agiHG~E~   47 (231)
T cd06239           2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGSG--------KIKILLWSQMHGNES   47 (231)
T ss_pred             hHHHCCCeeEEEEeeECCCCCeEEEEEEcCC--------CcEEEEEeccCCCCH
Confidence            4578999999999999999999999999973        579999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.09  E-value=2.5e-10  Score=84.22  Aligned_cols=57  Identities=14%  Similarity=0.127  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          37 LSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        37 ~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+|.+...+++.++   ++.+++.+||+|.+||+|++++++.+      .+||.||++|++||+|+
T Consensus        11 ~~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~~------~~k~~i~i~a~iH~~E~   67 (269)
T cd03856          11 QIYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCSF------ANKKYIFLIARVHPGET   67 (269)
T ss_pred             cCHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccCC------CCCcEEEEEcCcCCCch
Confidence            57788888888886   67899999999999999999988753      35899999999999995

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M

>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.97  E-value=6e-10  Score=82.46  Aligned_cols=45  Identities=27%  Similarity=0.194  Sum_probs=36.9

Q ss_pred             EEEEccccCCCceEEEEEEecCCCC--------------------------CCCCCCceEEEEccccCCCC
Q psy7680          58 KLHSIGKSVQNRDLWALQISRNVAS--------------------------GRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        58 ~~~~iG~S~eGR~i~~l~is~~~~~--------------------------~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +++++|||+|||+|++++|++..+.                          .....||+||+.++|||||+
T Consensus         1 ~l~~iGkS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~   71 (273)
T cd06240           1 KLVEIGKTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTET   71 (273)
T ss_pred             CeeEeecCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCch
Confidence            4789999999999999999974420                          02346999999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=98.94  E-value=2.1e-09  Score=78.82  Aligned_cols=50  Identities=18%  Similarity=0.062  Sum_probs=41.6

Q ss_pred             CCCCeEEEEccccCCCceEEEEEEecCCC-CCCCCCCceEEEEccccCCCC
Q psy7680          53 NPSKVKLHSIGKSVQNRDLWALQISRNVA-SGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        53 ~p~~v~~~~iG~S~eGR~i~~l~is~~~~-~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .++.++++++|+|++||+|++++|++... .....+||.|+|.|++||+|.
T Consensus         9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~   59 (258)
T cd06235           9 NNQYLKRKILCTTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGET   59 (258)
T ss_pred             CCCceEEEEeEEcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCCh
Confidence            56789999999999999999999997431 013357899999999999995

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc

>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.92  E-value=1.7e-09  Score=78.60  Aligned_cols=41  Identities=24%  Similarity=0.310  Sum_probs=34.1

Q ss_pred             ccccCCCceEEEEEEecCCCC--CCCCCCceEEEEccccCCCC
Q psy7680          62 IGKSVQNRDLWALQISRNVAS--GRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        62 iG~S~eGR~i~~l~is~~~~~--~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+|+|||||++++|++..+.  .....||+|++.|++||||+
T Consensus         1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~   43 (236)
T cd06243           1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEP   43 (236)
T ss_pred             CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCCh
Confidence            699999999999999976431  12357899999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.91  E-value=2e-09  Score=77.34  Aligned_cols=41  Identities=37%  Similarity=0.497  Sum_probs=34.0

Q ss_pred             ccccCCCceEEEEEEecCCCC----CCCCCCceEEEEccccCCCC
Q psy7680          62 IGKSVQNRDLWALQISRNVAS----GRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        62 iG~S~eGR~i~~l~is~~~~~----~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||+|+|||||++++|++..+.    ....+||+|++.|++||+|+
T Consensus         1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~   45 (226)
T cd03857           1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNES   45 (226)
T ss_pred             CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCc
Confidence            699999999999999985431    12347899999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins

Probab=98.89  E-value=3.9e-09  Score=77.71  Aligned_cols=49  Identities=16%  Similarity=0.237  Sum_probs=40.6

Q ss_pred             CCCeEEEEccccCCCceEEEEEEecCCC-CCCCCCCceEEEEccccCCCC
Q psy7680          54 PSKVKLHSIGKSVQNRDLWALQISRNVA-SGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        54 p~~v~~~~iG~S~eGR~i~~l~is~~~~-~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++.++++++|+|+|||+|++++|++... ......||.|||+|++|+||.
T Consensus        11 ~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~   60 (261)
T cd06907          11 SKFCKLRVLCRTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGET   60 (261)
T ss_pred             CCceEEEEEEECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChH
Confidence            4578999999999999999999997432 012357999999999999994

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N

>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins

Probab=98.75  E-value=1.8e-08  Score=75.64  Aligned_cols=47  Identities=17%  Similarity=0.097  Sum_probs=39.0

Q ss_pred             CeEEEEccccCCCceEEEEEEecCCCCC--------------------CCCCCceEEEEccccCCCC
Q psy7680          56 KVKLHSIGKSVQNRDLWALQISRNVASG--------------------RNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        56 ~v~~~~iG~S~eGR~i~~l~is~~~~~~--------------------~~~~kp~v~i~ggiHg~E~  102 (102)
                      .++.+.+|+|.|||+|++++|++..+..                    ...+||+|||+|+||++|.
T Consensus        15 y~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~   81 (304)
T cd06236          15 YYHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGET   81 (304)
T ss_pred             EEEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCc
Confidence            5788999999999999999999754310                    1257999999999999995

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.72  E-value=1.3e-08  Score=77.17  Aligned_cols=39  Identities=13%  Similarity=0.119  Sum_probs=33.2

Q ss_pred             EEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          60 HSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        60 ~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +.-++|+|||+|++|+|+++..    ..||+||++|+|||||.
T Consensus         4 ~~~~~S~EgR~I~~l~I~~~~~----~~kp~V~i~ggiHAREw   42 (332)
T cd06228           4 ELPHKTYEGRTPHGAKIGAGTL----TSRYGALFIGGVHARER   42 (332)
T ss_pred             CCCCCCCCCCeeEEEEEeCCCC----CCCCEEEEEccccccch
Confidence            3458999999999999997532    46899999999999993

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.59  E-value=3.5e-08  Score=72.98  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=33.3

Q ss_pred             ccccCCCceEEEEEEecCCCCC---------------------CCCCCceEEEEccccCCCC
Q psy7680          62 IGKSVQNRDLWALQISRNVASG---------------------RNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        62 iG~S~eGR~i~~l~is~~~~~~---------------------~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|+|+|||+|.++.|++..+..                     ....+|+|||.++|||||.
T Consensus         1 ~G~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~   62 (271)
T cd06238           1 YGRTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEI   62 (271)
T ss_pred             CCcCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCCh
Confidence            6999999999999999854310                     1236889999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>PRK10602 murein peptide amidase A; Provisional

Probab=98.57  E-value=4.9e-08  Score=71.05  Aligned_cols=39  Identities=21%  Similarity=0.189  Sum_probs=33.8

Q ss_pred             eEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          57 VKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        57 v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ....++|+|+|||||++++++.+       +|+.|+++|||||||.
T Consensus        15 ~~~~~iG~S~egrpi~~l~~~~~-------~~~~vli~agiHG~E~   53 (237)
T PRK10602         15 PGTEHYGRSLLGAPLLWFPAPAA-------SRESGLILAGTHGDET   53 (237)
T ss_pred             ccccccccccCCCceEEEEcCCC-------CCceEEEEecCCCCcH
Confidence            46789999999999999998753       3678999999999994

>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.42  E-value=2.8e-07  Score=68.14  Aligned_cols=41  Identities=29%  Similarity=0.259  Sum_probs=32.2

Q ss_pred             ccccCCCceEEEEEEecCCCC-------------------------CCCCCCceEEEEccccCCCC
Q psy7680          62 IGKSVQNRDLWALQISRNVAS-------------------------GRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        62 iG~S~eGR~i~~l~is~~~~~-------------------------~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ||||+|||+|+++.|++.+..                         .....|+.|+++++|||||+
T Consensus         1 iGkS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~   66 (268)
T cd06244           1 AGKSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDET   66 (268)
T ss_pred             CCcCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCH
Confidence            799999999999999987510                         01235677888899999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.38  E-value=3.7e-07  Score=66.35  Aligned_cols=50  Identities=20%  Similarity=0.186  Sum_probs=37.1

Q ss_pred             CHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          38 SFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        38 ~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++.+|...|.+|    |++ .+  --+|+|||+|.+++|+  .      +||+|||+||+||||.
T Consensus         3 ~~~~i~~~l~~~----~g~-~~--~a~S~EGR~I~~l~i~--~------~Kp~I~I~gGvHarEw   52 (240)
T cd06232           3 SAGQIAYELAVL----PGI-EF--AARSRQGRPVTGRYVA--G------LDHPVVISAGQHANET   52 (240)
T ss_pred             CHHHHHHHHhhc----CCc-cc--cccccCCCeeeEEEec--C------CCcEEEEeCCcCCCcc
Confidence            456666665444    442 22  5689999999999992  2      4799999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=98.32  E-value=1.1e-06  Score=65.29  Aligned_cols=56  Identities=13%  Similarity=0.092  Sum_probs=43.5

Q ss_pred             HHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCC------CCCCCceEEEEccccCCCC
Q psy7680          47 VAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASG------RNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        47 ~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~------~~~~kp~v~i~ggiHg~E~  102 (102)
                      +......+..++...+++|.+||++.+|.|++.+...      ....||.|||+|.+|++|+
T Consensus         5 ~~~~~~~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt   66 (278)
T cd06906           5 ESLHDPQQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGET   66 (278)
T ss_pred             hhhcCCcccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcc
Confidence            3334444567899999999999999999999854311      1147899999999999994

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna

>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.03  E-value=9.8e-06  Score=58.92  Aligned_cols=43  Identities=28%  Similarity=0.346  Sum_probs=35.8

Q ss_pred             CCeEEEEccccCC-CceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          55 SKVKLHSIGKSVQ-NRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        55 ~~v~~~~iG~S~e-GR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ...+++.+|+..+ +++|++++..+.     +.+||+|++.||+||+|+
T Consensus        13 ~~~~~~~~g~~~~~~~pL~~l~~~~~-----~~~~p~vlI~gGiHG~E~   56 (236)
T cd06231          13 SRLDVREYGQLAYQSYPLYALKSRGW-----DSDLPRVLITAGIHGDEP   56 (236)
T ss_pred             cceEEEEccccccCCeeEEEEEcCCC-----CCCCCEEEEECCCCCCcH
Confidence            3478999999766 999999998653     247899999999999995

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=97.22  E-value=0.00042  Score=51.46  Aligned_cols=31  Identities=23%  Similarity=0.344  Sum_probs=25.7

Q ss_pred             CCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          67 QNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        67 eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ...||++++|+++.     ..||+|+++||+||+|.
T Consensus         8 ~~~pi~~v~ig~~~-----~~~p~v~i~~giHg~E~   38 (273)
T cd03862           8 LRFPIYALELGSPD-----PKAPVLGLVGGVHGLER   38 (273)
T ss_pred             CcceeEEEEecCCC-----CCCCEEEEEcCcCCCcH
Confidence            46889999998642     46799999999999993

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]

Probab=96.10  E-value=0.0062  Score=47.12  Aligned_cols=38  Identities=29%  Similarity=0.253  Sum_probs=29.2

Q ss_pred             CeEEEEccccCCCc-eEEEEEEecCCCCCCCCCCceEEEEccccC
Q psy7680          56 KVKLHSIGKSVQNR-DLWALQISRNVASGRNLLKPMFKYVANIHG   99 (102)
Q Consensus        56 ~v~~~~iG~S~eGR-~i~~l~is~~~~~~~~~~kp~v~i~ggiHg   99 (102)
                      .+++..+|+|++|| +++..+-..+      ..+++++|.|++|+
T Consensus       120 ~~~~~~~g~sv~GR~~~~i~~~~~~------~~~~~i~~~~~~H~  158 (374)
T COG2866         120 LVELELIGRSVEGRDDPLITFPESN------PEHKTILITAGQHA  158 (374)
T ss_pred             cceeeecCccccccccceeeecCCC------CccceeeEeccccc
Confidence            56789999999999 5554444332      35789999999998

>KOG3641|consensus

Probab=95.54  E-value=0.018  Score=46.87  Aligned_cols=67  Identities=12%  Similarity=0.097  Sum_probs=54.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCC--CCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNP--SKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p--~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+.-=+||..|+-++..|+...+  -..+...++.|..||++.++.|...    .-..+|.|++.|-+|.+|+
T Consensus       375 aYhypyTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~a----e~~~~~~IfLSaRVHpgeT  443 (650)
T KOG3641|consen  375 AYHYPYTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDMA----ECAPRPVIFLSARVHPGET  443 (650)
T ss_pred             eeccCccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeHh----hcCCcceEEEecccCCCCC
Confidence            34445799999999999988665  2456778899999999999999942    2356899999999999985

>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases

Probab=95.20  E-value=0.031  Score=42.92  Aligned_cols=36  Identities=19%  Similarity=0.308  Sum_probs=25.7

Q ss_pred             EccccCCC--ceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          61 SIGKSVQN--RDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        61 ~iG~S~eG--R~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .++++..|  +.|.+.++....      +.|+|+++|++||+|.
T Consensus         4 ~~~~~~~g~~~~ipv~~~~g~~------~gp~v~i~agiHGdE~   41 (359)
T cd06250           4 PLPSPAPGTERELTVFRFGGAG------AGPKVYIQASLHADEL   41 (359)
T ss_pred             ecccCCCCCeEEEEEEEEeCCC------CCCEEEEEeccccCch
Confidence            34555555  667777776421      2589999999999994

This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding

>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=94.64  E-value=0.045  Score=40.77  Aligned_cols=34  Identities=21%  Similarity=0.248  Sum_probs=22.8

Q ss_pred             cccCCCce--EEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          63 GKSVQNRD--LWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        63 G~S~eGR~--i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++...|.+  |.+..+....      +.|+++++||+||||.
T Consensus         3 ~~~~~g~~~~~pv~~~~g~~------~gp~v~i~agvHG~E~   38 (293)
T cd06255           3 GTMADGSAVALPVTILRGAE------PGPTLWLHAQVHGNEY   38 (293)
T ss_pred             ccCCCCCccceeEEEEeCCC------CCCEEEEEcccCCCcH
Confidence            45555655  4555555321      2489999999999994

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=94.20  E-value=0.071  Score=40.12  Aligned_cols=28  Identities=21%  Similarity=0.162  Sum_probs=20.9

Q ss_pred             CceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          68 NRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        68 GR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .-.|.+.+|..+.       .|+|+++||+||||.
T Consensus        21 ~~~iPv~v~~g~~-------gp~v~I~aGiHGdE~   48 (316)
T cd06252          21 TVMIPITVIKNGD-------GPTVLLTGGNHGDEY   48 (316)
T ss_pred             ceEeeEEEEeCCC-------CCEEEEEccCCCCch
Confidence            4567766666432       379999999999994

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=94.17  E-value=0.064  Score=39.81  Aligned_cols=15  Identities=47%  Similarity=0.769  Sum_probs=13.7

Q ss_pred             CceEEEEccccCCCC
Q psy7680          88 KPMFKYVANIHGDEV  102 (102)
Q Consensus        88 kp~v~i~ggiHg~E~  102 (102)
                      .|+|+++||+||||+
T Consensus        20 gp~v~i~~giHGdE~   34 (287)
T cd06251          20 GPTLLLTAAIHGDEL   34 (287)
T ss_pred             CCEEEEEcCccCCch
Confidence            489999999999995

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=94.17  E-value=0.28  Score=36.73  Aligned_cols=59  Identities=17%  Similarity=0.166  Sum_probs=36.1

Q ss_pred             CCHHHHHHHHHHHHHhCCCCeEEEEc---cccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCC
Q psy7680          37 LSFDELTKFLVAAAQQNPSKVKLHSI---GKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDE  101 (102)
Q Consensus        37 ~~~~ei~~~l~~la~~~p~~v~~~~i---G~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E  101 (102)
                      .+|+|-.+-+.+-++.-.-.++-..+   |..-+--+|.++.++...      .+|++++++|+||.|
T Consensus         3 ~sY~eAR~kFl~aA~~aga~~~~~~~~~~gp~g~~l~i~v~~~g~~~------~~~~l~i~sGvHG~E   64 (283)
T cd06233           3 QSYAEAREKFLAAAKAAGAALESYVHPLLGPDGEALAIDVARLGPAD------AKRLLVITSGTHGVE   64 (283)
T ss_pred             ccHHHHHHHHHHHHHHcCccceeeeccCCCCCCceeeeeEEEEcCCC------CCcEEEEEecccCCc
Confidence            46788777555555543322232222   333333458888887532      346999999999999

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3

Probab=92.52  E-value=0.14  Score=38.67  Aligned_cols=17  Identities=24%  Similarity=0.339  Sum_probs=14.6

Q ss_pred             CCCceEEEEccccCCCC
Q psy7680          86 LLKPMFKYVANIHGDEV  102 (102)
Q Consensus        86 ~~kp~v~i~ggiHg~E~  102 (102)
                      ...|+|+++||+||||+
T Consensus        40 ~~gp~v~IsaGvHGNE~   56 (322)
T cd03855          40 PATKAIVISAGVHGNET   56 (322)
T ss_pred             CCCCeEEEEccccCCch
Confidence            34579999999999995

5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.

>TIGR02994 ectoine_eutE ectoine utilization protein EutE

Probab=92.20  E-value=0.19  Score=38.17  Aligned_cols=15  Identities=33%  Similarity=0.432  Sum_probs=13.5

Q ss_pred             CceEEEEccccCCCC
Q psy7680          88 KPMFKYVANIHGDEV  102 (102)
Q Consensus        88 kp~v~i~ggiHg~E~  102 (102)
                      .|+++++||+||+|.
T Consensus        47 gp~v~i~agvHGdE~   61 (325)
T TIGR02994        47 GPTALLTGGNHGDEY   61 (325)
T ss_pred             CCEEEEEeccCCCch
Confidence            389999999999994

Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.

>PRK05324 succinylglutamate desuccinylase; Provisional

Probab=92.19  E-value=0.098  Score=39.78  Aligned_cols=17  Identities=29%  Similarity=0.372  Sum_probs=14.6

Q ss_pred             CCCceEEEEccccCCCC
Q psy7680          86 LLKPMFKYVANIHGDEV  102 (102)
Q Consensus        86 ~~kp~v~i~ggiHg~E~  102 (102)
                      ...|.|+++||+||||+
T Consensus        45 ~~gp~v~IsaGvHGNE~   61 (329)
T PRK05324         45 PSTKALVLSAGIHGNET   61 (329)
T ss_pred             CCCCeEEEECCcccCcH
Confidence            34579999999999995

>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]

Probab=91.38  E-value=0.15  Score=38.66  Aligned_cols=48  Identities=19%  Similarity=0.264  Sum_probs=27.5

Q ss_pred             HHHHhCCCCeEEEEccccCC--CceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          48 AAAQQNPSKVKLHSIGKSVQ--NRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        48 ~la~~~p~~v~~~~iG~S~e--GR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .|+-+.|.+.+.+.-|-.|.  |+=  ++.+.+...  .+ .  .+.|+|||||||+
T Consensus         8 tl~~~~p~v~q~~~~g~~~~wl~~g--~le~~p~~~--r~-~--~lvIsaGiHGNEt   57 (324)
T COG2988           8 TLSGKKPVVTQREINGVRWRWLGEG--VLELTPLAP--RD-G--SLVISAGIHGNET   57 (324)
T ss_pred             hhcCCCCeeeeeccCceEEEEeccc--eeeeccCCC--CC-C--ceEEEecccCCcc
Confidence            35556776666555555432  222  344544321  11 1  6999999999995

>TIGR03242 arg_catab_astE succinylglutamate desuccinylase

Probab=91.22  E-value=0.14  Score=38.71  Aligned_cols=16  Identities=31%  Similarity=0.439  Sum_probs=14.0

Q ss_pred             CCceEEEEccccCCCC
Q psy7680          87 LKPMFKYVANIHGDEV  102 (102)
Q Consensus        87 ~kp~v~i~ggiHg~E~  102 (102)
                      .-|+|+++||+||||.
T Consensus        40 ~gp~v~IsaGvHGNE~   55 (319)
T TIGR03242        40 PQKSLVISAGIHGNET   55 (319)
T ss_pred             CCCEEEEEcCcccchH
Confidence            4579999999999995

Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.

>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=91.05  E-value=0.14  Score=38.93  Aligned_cols=14  Identities=29%  Similarity=0.448  Sum_probs=13.1

Q ss_pred             ceEEEEccccCCCC
Q psy7680          89 PMFKYVANIHGDEV  102 (102)
Q Consensus        89 p~v~i~ggiHg~E~  102 (102)
                      |+|+++||+||||.
T Consensus        35 p~v~I~aGvHGNE~   48 (327)
T cd06256          35 PPLFVSTLLHGNEP   48 (327)
T ss_pred             CeEEEEccccCCcH
Confidence            79999999999994

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>COG3608 Predicted deacylase [General function prediction only]

Probab=88.13  E-value=0.53  Score=36.09  Aligned_cols=15  Identities=40%  Similarity=0.671  Sum_probs=13.5

Q ss_pred             CceEEEEccccCCCC
Q psy7680          88 KPMFKYVANIHGDEV  102 (102)
Q Consensus        88 kp~v~i~ggiHg~E~  102 (102)
                      .|+++++++.||||.
T Consensus        48 gp~~~l~ag~HGdEl   62 (331)
T COG3608          48 GPSVLLQAGVHGDEL   62 (331)
T ss_pred             CCEEEEEeccccccc
Confidence            489999999999994

>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3

Probab=86.35  E-value=0.57  Score=34.14  Aligned_cols=16  Identities=25%  Similarity=0.544  Sum_probs=14.3

Q ss_pred             cCCCceEEEEEEecCC
Q psy7680          65 SVQNRDLWALQISRNV   80 (102)
Q Consensus        65 S~eGR~i~~l~is~~~   80 (102)
                      |+|||+|++++|+++.
T Consensus         1 S~eGR~I~~~~ig~~~   16 (255)
T cd06229           1 SVLGRDIYEVKLGNGP   16 (255)
T ss_pred             CCCCceeeEEEEcCCC
Confidence            7899999999999754

4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	102
3mn8_A	435	Structure Of Drosophila Melanogaster Carboxypeptida		4e-15
1uwy_A	426	Crystal Structure Of Human Carboxypeptidase M Lengt		4e-09
1qmu_A	380	Duck Carboxypeptidase D Domain Ii Length = 380		3e-08
2nsm_A	439	Crystal Structure Of The Human Carboxypeptidase N (		6e-06
3prt_A	323	Mutant Of The Carboxypeptidase T Length = 323		1e-05
3v38_A	326	Carboxypeptidase T Mutant L254n Length = 326		1e-05
1obr_A	326	Carboxypeptidase T Length = 326		1e-05
3qnv_A	323	Carboxypeptidase T Length = 323		1e-05

>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D Isoform 1b Short Length = 435

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 26  DPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRN 85
           + E FL+ PHY S ++L        +  P++ K+H +G+S++ R+L ALQISRN  S RN
Sbjct: 30  EDESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRS-RN 88
Query: 86  LLKPMFKYVANIHGDEV 102
           LL P  KY+AN+HGDE 
Sbjct: 89  LLTPPVKYIANMHGDET 105

>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M Length = 426

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 42  LTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDE 101
           +  FL   AQ   S   LHSIGKSV+ R+LW L + R     R +  P FKYVAN+HGDE
Sbjct: 11  MEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHR-IGIPEFKYVANMHGDE 69
Query: 102 V 102
Sbjct: 70  T 70

>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii Length = 380

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 39  FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH 98
           F ++  FL   A + PS  +L+S+GKSV+ R+L+ ++IS N        +P FKY+ N+H
Sbjct: 13  FSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGI-HEAGEPEFKYIGNMH 71
Query: 99  GDEV 102
           G+EV
Sbjct: 72  GNEV 75

>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N (kininase I) Catalytic Domain Length = 439

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 39  FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIH 98
           +D+L + L     + P   +++SIG+SV+ R L+ L+ S +       L+P  KYV N+H
Sbjct: 9   YDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPGI-HEPLEPEVKYVGNMH 67
Query: 99  GDEV 102
           G+E 
Sbjct: 68  GNEA 71

>pdb|3PRT|A Chain A, Mutant Of The Carboxypeptidase T Length = 323

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y +++E+   +   A   P+ VK  SIGKS + R+LWA++IS NV +  N  +P   Y A
Sbjct: 9   YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 96  NIHGDE 101
             H  E
Sbjct: 67  LHHARE 72

>pdb|3V38|A Chain A, Carboxypeptidase T Mutant L254n Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y +++E+   +   A   P+ VK  SIGKS + R+LWA++IS NV +  N  +P   Y A
Sbjct: 9   YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 96  NIHGDE 101
             H  E
Sbjct: 67  LHHARE 72

>pdb|1OBR|A Chain A, Carboxypeptidase T Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y +++E+   +   A   P+ VK  SIGKS + R+LWA++IS NV +  N  +P   Y A
Sbjct: 9   YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 96  NIHGDE 101
             H  E
Sbjct: 67  LHHARE 72

>pdb|3QNV|A Chain A, Carboxypeptidase T Length = 323

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y +++E+   +   A   P+ VK  SIGKS + R+LWA++IS NV +  N  +P   Y A
Sbjct: 9   YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYTA 66
Query: 96  NIHGDE 101
             H  E
Sbjct: 67  LHHARE 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	2e-22
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	2e-21
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	1e-20
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	4e-20
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	4e-18
2c1c_A	312	Carboxypeptidase B; insect, metalloprotease, insen	2e-13
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	6e-13
1m4l_A	307	Carboxypeptidase A; metalloproteinase, metalloexop	6e-12
1pca_A	403	Procarboxypeptidase A PCPA; hydrolase(C-terminal p	7e-12
1z5r_A	306	Procarboxypeptidase B; exopeptidase, hydrolase; 1.	8e-12
2bo9_A	308	Carboxypeptidase A4; metallocarboxypeptidase, X-RA	1e-11
3d4u_A	309	Tafia, carboxypeptidase B2; protease-inhibitor com	2e-11
1kwm_A	402	Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A	2e-11
3dgv_A	401	TAFI, carboxypeptidase B2; blood coagulation, fibr	3e-11
2boa_A	404	Carboxypeptidase A4; metalloprocarboxypeptidase, X	4e-11
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	1e-10
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	2e-10
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	3e-04

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Length = 435

 Score = 88.8 bits (220), Expect = 2e-22
 Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 9/104 (8%)

Query: 7   SLCFLLCWVGCT--------TPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVK 58
           +L  L   +G                 + E FL+ PHY S ++L        +  P++ K
Sbjct: 3   TLGLLFASIGIAVLAMGVPHCRGYTIKEDESFLQQPHYASQEQLEDLFAGLEKAYPNQAK 62

Query: 59  LHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV 102
           +H +G+S++ R+L ALQISRN  S RNLL P  KY+AN+HGDE 
Sbjct: 63  VHFLGRSLEGRNLLALQISRNTRS-RNLLTPPVKYIANMHGDET 105

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Length = 380

 Score = 85.7 bits (212), Expect = 2e-21
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            +  F ++  FL   A + PS  +L+S+GKSV+ R+L+ ++IS N        +P FKY+
Sbjct: 9   RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGI-HEAGEPEFKYI 67

Query: 95  ANIHGDEV 102
            N+HG+EV
Sbjct: 68  GNMHGNEV 75

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Length = 426

 Score = 83.5 bits (206), Expect = 1e-20
 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
           +Y   + +  FL   AQ   S   LHSIGKSV+ R+LW L + R       +  P FKYV
Sbjct: 4   NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRF-PKEHRIGIPEFKYV 62

Query: 95  ANIHGDEV 102
           AN+HGDE 
Sbjct: 63  ANMHGDET 70

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Length = 439

 Score = 82.4 bits (203), Expect = 4e-20
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           +  +D+L + L     + P   +++SIG+SV+ R L+ L+ S +       L+P  KYV 
Sbjct: 6   HHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHP-GIHEPLEPEVKYVG 64

Query: 96  NIHGDEV 102
           N+HG+E 
Sbjct: 65  NMHGNEA 71

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Length = 323

 Score = 75.8 bits (187), Expect = 4e-18
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y +++E+   +   A   P+ VK  SIGKS + R+LWA++IS NV +  N  +P   Y 
Sbjct: 8   GYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYT 65

Query: 95  ANIHGDEV 102
           A  H  E 
Sbjct: 66  ALHHAREH 73

>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1 Length = 312

 Score = 63.2 bits (154), Expect = 2e-13
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
           +Y   + + ++L    ++ P    + +  +S + R +  ++IS       N  KP+    
Sbjct: 5   NYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDEN--KPVIFID 62

Query: 95  ANIHGDE 101
             IH  E
Sbjct: 63  GGIHARE 69

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1 Length = 433

 Score = 61.8 bits (150), Expect = 6e-13
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
              S++E+  +L   A++ P+ V +   GKS + R +  L+IS       +  KP+    
Sbjct: 120 KIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDAS--KPVVMMQ 177

Query: 95  ANIHGDE 101
           + +H  E
Sbjct: 178 SLLHCRE 184

>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ... Length = 307

 Score = 59.0 bits (143), Expect = 6e-12
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y + DE+  F+     ++P  V    IG+S + R ++ L+ S   ++     +P     
Sbjct: 11  TYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-----RPAIWID 65

Query: 95  ANIHGDE 101
             IH  E
Sbjct: 66  LGIHSRE 72

>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A Length = 403

 Score = 59.0 bits (143), Expect = 7e-12
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y + +E+  F+     ++P+ V    IG+S + R ++ L+ S   ++     +P     
Sbjct: 106 TYHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTGGSN-----RPAIWID 160

Query: 95  ANIHGDE 101
           + IH  E
Sbjct: 161 SGIHSRE 167

>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ... Length = 306

 Score = 58.6 bits (142), Expect = 8e-12
 Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 5/67 (7%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y +++ +  +      +NP  +   +IG +    +++ L++ +   +     KP     
Sbjct: 8   KYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPN-----KPAIFMD 62

Query: 95  ANIHGDE 101
              H  E
Sbjct: 63  CGFHARE 69

>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A* Length = 308

 Score = 58.1 bits (141), Expect = 1e-11
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y S + +   +   A   P   +   IG S +NR ++ L+ S     G    +P     
Sbjct: 9   AYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTG--KGVR--RPAVWLN 64

Query: 95  ANIHGDE 101
           A IH  E
Sbjct: 65  AGIHSRE 71

>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A Length = 309

 Score = 57.4 bits (139), Expect = 2e-11
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y S +E+  ++    ++ P  V+   IG S +   L+ L++S+         K      
Sbjct: 8   QYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRA----KNAMWID 63

Query: 95  ANIHGDE 101
             IH  E
Sbjct: 64  CGIHARE 70

>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A Length = 402

 Score = 57.5 bits (139), Expect = 2e-11
 Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y  ++ +  +    A +NP+ +    IG + + R ++ L++ +   +     KP     
Sbjct: 103 KYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQN-----KPAIFMD 157

Query: 95  ANIHGDE 101
              H  E
Sbjct: 158 CGFHARE 164

>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A* Length = 401

 Score = 57.1 bits (138), Expect = 3e-11
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y S +E+  ++    ++ P  V+   IG S +   L+ L++S+         K      
Sbjct: 100 QYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRA----KNAMWID 155

Query: 95  ANIHGDE 101
             IH  E
Sbjct: 156 CGIHARE 162

>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 Length = 404

 Score = 56.7 bits (137), Expect = 4e-11
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y S + +   +   A   P   +   IG S +NR ++ L+ S    +G+ + +P     
Sbjct: 105 AYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS----TGKGVRRPAVWLN 160

Query: 95  ANIHGDE 101
           A IH  E
Sbjct: 161 AGIHSRE 167

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A Length = 401

 Score = 55.2 bits (133), Expect = 1e-10
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y + +E+++ +     ++P  V   +IG S +NR +  L+ S          KP     
Sbjct: 104 AYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------KPAIWLD 157

Query: 95  ANIHGDE 101
           A IH  E
Sbjct: 158 AGIHARE 164

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1 Length = 303

 Score = 54.3 bits (131), Expect = 2e-10
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y + +E+++ +     ++P  V   +IG S +NR +  L+ S          KP     
Sbjct: 5   AYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------KPAIWLD 58

Query: 95  ANIHGDE 101
           A IH  E
Sbjct: 59  AGIHARE 65

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344} Length = 403

 Score = 37.5 bits (86), Expect = 3e-04
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
              S +  ++FL   A Q   +  +  +G++V+ R +  + +     +G    K     +
Sbjct: 131 EPYSEERHSEFL--GAVQQMPQASVVELGRTVEGRPMSLVVLGTPDEAGAA--KKKVWII 186

Query: 95  ANIHGDEV 102
           A  H  E 
Sbjct: 187 ARQHPGES 194

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	99.85
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	99.78
3v38_A	326	Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Th	99.78
2c1c_A	312	Carboxypeptidase B; insect, metalloprotease, insen	99.78
1z5r_A	306	Procarboxypeptidase B; exopeptidase, hydrolase; 1.	99.76
1m4l_A	307	Carboxypeptidase A; metalloproteinase, metalloexop	99.76
2bo9_A	308	Carboxypeptidase A4; metallocarboxypeptidase, X-RA	99.76
3d4u_A	309	Tafia, carboxypeptidase B2; protease-inhibitor com	99.76
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	99.76
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	99.75
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	99.75
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	99.75
3dgv_A	401	TAFI, carboxypeptidase B2; blood coagulation, fibr	99.74
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	99.73
2boa_A	404	Carboxypeptidase A4; metalloprocarboxypeptidase, X	99.73
1kwm_A	402	Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A	99.73
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	99.71
1pca_A	403	Procarboxypeptidase A PCPA; hydrolase(C-terminal p	99.64
2qvp_A	275	Uncharacterized protein; putative metallopeptidase	99.54
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	99.51
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	99.48
3l2n_A	395	Peptidase M14, carboxypeptidase A; putative carbox	99.46
4axv_A	243	MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}	98.99
3b2y_A	275	Metallopeptidase containing CO-catalytic metalloa	98.58
2bco_A	350	Succinylglutamate desuccinylase; NESG, VPR14, stru	97.37
1yw6_A	335	Succinylglutamate desuccinylase; alpha-beta protei	97.34
3fmc_A	368	Putative succinylglutamate desuccinylase / aspart;	97.02
2qj8_A	332	MLR6093 protein; structural genomics, joint center	95.27
3cdx_A	354	Succinylglutamatedesuccinylase/aspartoacylase; str	94.54
3na6_A	331	Succinylglutamate desuccinylase/aspartoacylase; st	93.84
1yw4_A	341	Succinylglutamate desuccinylase; alpha-beta protei	92.93
3nh4_A	327	Aspartoacylase-2; mercapturates, hydrolase; 2.00A	90.95

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}

Probab=99.85  E-value=5.4e-21  Score=147.13  Aligned_cols=99  Identities=40%  Similarity=0.717  Sum_probs=70.2

Q ss_pred             CCccchhHHHHHH-HhhcCCCcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecC
Q psy7680           1 MSFSSISLCFLLC-WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRN   79 (102)
Q Consensus         1 ~~~~~~~~~~~~~-~~~c~~p~~~~~~~~~~~~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~   79 (102)
                      |-|.++++..++. +.+|..|..  +++.+|.++..||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~is~~   83 (435)
T 3mn8_A            6 LLFASIGIAVLAMGVPHCRGYTI--KEDESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRN   83 (435)
T ss_dssp             -------------------------CCCCGGGSSCCCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTSCEEEEEEECSC
T ss_pred             hhHHHHHHHHHccccccccCCCC--CChhhccCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEeeEccCCCEEEEEEEeCC
Confidence            4566666644443 455555533  3556888899999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCCCCceEEEEccccCCCC
Q psy7680          80 VASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        80 ~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++ ....+||.|+++|+|||||.
T Consensus        84 ~~-~~~~~kp~v~i~~giHg~E~  105 (435)
T 3mn8_A           84 TR-SRNLLTPPVKYIANMHGDET  105 (435)
T ss_dssp             TT-SCCTTCCEEEEECCSSTTCC
T ss_pred             CC-ccccCCCEEEEEecCCCCCh
Confidence            65 45568999999999999995

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A

Probab=99.78  E-value=5.9e-19  Score=130.97  Aligned_cols=69  Identities=35%  Similarity=0.524  Sum_probs=63.1

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+.+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++  ...+||+|+++|+|||||.
T Consensus         5 ~~~~y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~--~~~~kp~v~i~~giHg~E~   73 (323)
T 3prt_A            5 YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVG--TDENEPEVLYTALHHAREH   73 (323)
T ss_dssp             GGTTSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTT--SCCSSCEEEEEECSSTTCT
T ss_pred             ccCCCCCHHHHHHHHHHHHHHCCCcEEEEeceeccCCCceEEEEecCCCC--CCCCCceEEEecccCcCcc
Confidence            46899999999999999999999999999999999999999999998653  2357999999999999995

>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A

Probab=99.78  E-value=6.4e-19  Score=131.44  Aligned_cols=71  Identities=35%  Similarity=0.532  Sum_probs=63.9

Q ss_pred             CC-CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          30 FL-ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        30 ~~-~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      || ...+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.+  ...+||+|++.|+|||||.
T Consensus         2 ~p~~d~~Y~ty~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~--~~~~kp~v~i~~giHa~E~   73 (326)
T 3v38_A            2 FPSYDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVG--TDENEPEVLYTALHHAREH   73 (326)
T ss_dssp             CCGGGTTSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTT--SCCCCCEEEEEECSSTTCT
T ss_pred             CCCccCCcCCHHHHHHHHHHHHHHCCCCEEEEEeeEccCCCEEEEEEEecCCC--CCCCCCEEEEEcccCCCCh
Confidence            44 46799999999999999999999999999999999999999999997543  3457999999999999994

>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1

Probab=99.78  E-value=1.1e-18  Score=128.70  Aligned_cols=69  Identities=17%  Similarity=0.242  Sum_probs=63.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|..|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.  ....+||+|+++|+|||||.
T Consensus         2 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~--~~~~~~p~v~i~agiHg~E~   70 (312)
T 2c1c_A            2 PYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTN--FEDENKPVIFIDGGIHAREW   70 (312)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTT--TCCTTSCEEEEEECSSTTCT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEecCCC--ccCCCCCEEEEEeccCCCcc
Confidence            6799999999999999999999999999999999999999999999754  23467899999999999995

>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...

Probab=99.76  E-value=2.3e-18  Score=126.72  Aligned_cols=66  Identities=15%  Similarity=0.320  Sum_probs=61.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|..|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.     .+||+|+++|+|||||.
T Consensus         5 ~~~~y~~~~e~~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~-----~~~p~v~i~agiHg~E~   70 (306)
T 1z5r_A            5 SYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPG-----PNKPAIFMDCGFHAREW   70 (306)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESCCC-----SSCCEEEEECCSSTTCH
T ss_pred             CcccCCCHHHHHHHHHHHHHHCCCceEEEeccccCCCCeeEEEEeCCCC-----CCCceEEEEecccccch
Confidence            7899999999999999999999999999999999999999999999742     46899999999999994

>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...

Probab=99.76  E-value=3.2e-18  Score=126.17  Aligned_cols=66  Identities=24%  Similarity=0.370  Sum_probs=61.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++..|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.     ..||+|+++|+|||||.
T Consensus         8 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~-----~~~p~v~i~agiHg~E~   73 (307)
T 1m4l_A            8 NYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGG-----SNRPAIWIDLGIHSREW   73 (307)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSSC-----SSCCEEEEEECSSTTCH
T ss_pred             CccCCCCHHHHHHHHHHHHHHCCCceEEEeCcccCCCCeEEEEEEECCC-----CCCcEEEEEcccccCcc
Confidence            7899999999999999999999999999999999999999999999752     46899999999999994

>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*

Probab=99.76  E-value=2.8e-18  Score=126.36  Aligned_cols=67  Identities=24%  Similarity=0.331  Sum_probs=62.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|.+|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++    .+||+|+++|+|||||.
T Consensus         6 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~----~~~p~v~i~agiHg~E~   72 (308)
T 2bo9_A            6 NYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKG----VRRPAVWLNAGIHSREW   72 (308)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECSSTT----SCCCEEEEEECSSTTCH
T ss_pred             CcccCCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCCeEEEEEecCCCC----CCCceEEEEccccCcch
Confidence            78999999999999999999999999999999999999999999997532    46899999999999993

>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A

Probab=99.76  E-value=1.7e-18  Score=127.48  Aligned_cols=67  Identities=22%  Similarity=0.318  Sum_probs=59.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|++|++|+||.+||++|+++||+++++.+||+|+|||+|++++|++.++    .+||+|+++|+|||||.
T Consensus         5 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~----~~~p~v~i~agiHg~E~   71 (309)
T 3d4u_A            5 YYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQ----RAKNAMWIDCGIHAREW   71 (309)
T ss_dssp             GGGSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECCC---------CEEEEECCSSTTCT
T ss_pred             CcccCCCHHHHHHHHHHHHHHCCCceEEEeccccCCCCeeEEEEeCCCCC----CCCceEEEEeccCCcch
Confidence            67899999999999999999999999999999999999999999996332    46899999999999995

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1

Probab=99.76  E-value=3.4e-18  Score=125.75  Aligned_cols=65  Identities=26%  Similarity=0.316  Sum_probs=61.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|+.|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++      .+||+|+++|+|||||.
T Consensus         2 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~------~~~p~v~i~agiHg~E~   66 (303)
T 1dtd_A            2 NFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG------GDKPAIWLDAGIHAREW   66 (303)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECCS------SSCCEEEEECCSSTTCH
T ss_pred             CcCCCCCHHHHHHHHHHHHHHCCCceEEEeCcccCCCCeEEEEEEeCC------CCCcEEEEEcccccCcc
Confidence            679999999999999999999999999999999999999999999975      25799999999999993

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1

Probab=99.75  E-value=4.9e-18  Score=130.60  Aligned_cols=72  Identities=24%  Similarity=0.288  Sum_probs=64.9

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          28 EPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        28 ~~~~~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ..| +|..||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.  ....+||+|+++|||||||.
T Consensus       114 ~~~-~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~--~~~~~kp~v~i~agiHg~E~  185 (433)
T 1jqg_A          114 SRL-SFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTN--FQDASKPVVMMQSLLHCREW  185 (433)
T ss_dssp             SCC-CSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECTTT--TCCTTSCEEEEEECSSTTCT
T ss_pred             ccc-CcCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECCCCCeEEEEEecCCC--CCCCCCCEEEEecCcCCCch
Confidence            344 7899999999999999999999999999999999999999999999743  23457999999999999995

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*

Probab=99.75  E-value=4.9e-18  Score=128.28  Aligned_cols=69  Identities=38%  Similarity=0.595  Sum_probs=63.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        33 ~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ..+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ ....+||+|+++|+|||||.
T Consensus         7 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~-~~~~~~p~v~i~~giHg~E~   75 (380)
T 1h8l_A            7 DFRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPG-IHEAGEPEFKYIGNMHGNEV   75 (380)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEESSSTT-CCCTTCCEEEEECCSSTTCC
T ss_pred             CCccCCHHHHHHHHHHHHHHCCCcEEEEECCcCCCCCEEEEEEEcCCCc-cccCCCceEEEEcccCCCch
Confidence            4589999999999999999999999999999999999999999997654 44567999999999999995

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}

Probab=99.75  E-value=3.3e-18  Score=131.45  Aligned_cols=69  Identities=32%  Similarity=0.535  Sum_probs=63.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        33 ~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +.+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ ....+||+|+++|+|||||.
T Consensus         3 ~~~y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~-~~~~~kp~v~i~~giHg~E~   71 (439)
T 2nsm_A            3 AFRHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPG-IHEPLEPEVKYVGNMHGNEA   71 (439)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHSGGGEEEEEEEECTTSCEEEEEEECSSTT-SCCTTCCEEEEEECSSTTCC
T ss_pred             CCCcCCHHHHHHHHHHHHHHCCCceEEEecCccCCCCEEEEEEECCCCC-ccccCCceEEEecccCCCcH
Confidence            5789999999999999999999999999999999999999999998665 45568999999999999995

>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*

Probab=99.74  E-value=5e-18  Score=129.70  Aligned_cols=67  Identities=22%  Similarity=0.318  Sum_probs=62.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|.+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|++++.    ..||+|++.|||||||.
T Consensus        97 ~~~~Y~t~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~----~~kp~v~i~~giHg~E~  163 (401)
T 3dgv_A           97 YYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQ----RAKNAMWIDCGIHAREW  163 (401)
T ss_dssp             GGGSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECCCCS----SCCEEEEEEECSSTTCT
T ss_pred             CccccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCCCCEEEEEEecCCCC----CCCcEEEEeCCCCCCCC
Confidence            78999999999999999999999999999999999999999999997542    36899999999999994

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1

Probab=99.73  E-value=9.4e-18  Score=128.63  Aligned_cols=68  Identities=44%  Similarity=0.675  Sum_probs=62.5

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++ ....+||+|+++|+|||||.
T Consensus         3 f~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~-~~~~~~p~v~i~agiHg~E~   70 (426)
T 1uwy_A            3 FNYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPK-EHRIGIPEFKYVANMHGDET   70 (426)
T ss_dssp             SSCCCHHHHHHHHHHHHHHTTTSEEEEEEEECTTSCEEEEEEESSSTT-SCBTTBCEEEEEECCSTTCC
T ss_pred             cccCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCCEEEEEEEcCCCc-cccCCCceEEEecccCCCCh
Confidence            589999999999999999999999999999999999999999998654 44467999999999999995

>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1

Probab=99.73  E-value=1.3e-17  Score=127.12  Aligned_cols=67  Identities=24%  Similarity=0.331  Sum_probs=62.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|..|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++++    .+||+|+++|||||||.
T Consensus       102 ~~~~y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~----~~kp~v~i~agiHg~E~  168 (404)
T 2boa_A          102 NYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKG----VRRPAVWLNAGIHSREW  168 (404)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECSSTT----SCCCEEEEEECSSTTCH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCceEEEEeccCCCCCeeEEEEeccCCC----CCCCeEEEeCCCCCCCc
Confidence            78999999999999999999999999999999999999999999997432    46899999999999993

>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A

Probab=99.73  E-value=1.6e-17  Score=126.63  Aligned_cols=66  Identities=18%  Similarity=0.350  Sum_probs=61.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|..|++|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.     .+||+|+++|||||||.
T Consensus       100 ~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~-----~~kp~v~i~agiHg~E~  165 (402)
T 1kwm_A          100 SYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAG-----QNKPAIFMDCGFHAREW  165 (402)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESCCC-----TTCCEEEEECCSSTTCT
T ss_pred             CcCCCCCHHHHHHHHHHHHHHCCCcEEEEEcccCCCCCceEEEEeCCCC-----CCCceEEEecCCCCCcc
Confidence            7899999999999999999999999999999999999999999999642     46899999999999995

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A

Probab=99.71  E-value=3.4e-17  Score=124.86  Aligned_cols=65  Identities=26%  Similarity=0.322  Sum_probs=61.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|..|++|+||.+||++|+++||+++++.+||+|+|||+|++++|++++      +||+|+++|+|||||.
T Consensus       101 ~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~------~kp~v~i~agiHg~E~  165 (401)
T 1aye_A          101 NFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG------DKPAIWLDAGIHAREW  165 (401)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSSS------SCCEEEEEECSSTTCH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCcEEEEEcccCCCCCeeEEEEecCCC------CCceEEEecccCCCcc
Confidence            7899999999999999999999999999999999999999999999742      5899999999999993

>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A

Probab=99.64  E-value=1.7e-17  Score=126.66  Aligned_cols=66  Identities=23%  Similarity=0.379  Sum_probs=0.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|..||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.     .+||+|+++|+|||||.
T Consensus       103 ~~~~y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~-----~~kp~v~i~agiHg~E~  168 (403)
T 1pca_A          103 NYATYHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTGG-----SNRPAIWIDSGIHSREW  168 (403)
T ss_dssp             -----------------------------------------------------------------------
T ss_pred             CccCCCCHHHHHHHHHHHHHHCCCcEEEEEeccCCCCCeEEEEEeCCCC-----CCCCEEEEecCCCCCch
Confidence            7899999999999999999999999999999999999999999999752     46899999999999994

>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}

Probab=99.54  E-value=1.7e-15  Score=110.04  Aligned_cols=64  Identities=17%  Similarity=0.213  Sum_probs=57.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHhCCCC-eEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          33 NPHYLSFDELTKFLVAAAQQNPSK-VKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        33 ~~~y~~~~ei~~~l~~la~~~p~~-v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ...+++|+||.+||++|+++||++ +++.+||+|+ ||||++++++++     ..+||+|+++||+||||.
T Consensus        15 ~~~~~~~~ei~~~l~~l~~~~p~~~~~~~~iG~S~-grpl~~~~~~~~-----~~~~p~v~i~~giHg~E~   79 (275)
T 2qvp_A           15 EIFECQSTDIQRFYSLLAIETERLGLGSKILGQAG-HHPLYLLQSPGQ-----KAGLPNLLISAGFHGEES   79 (275)
T ss_dssp             TTTTEETTCHHHHHHHHHHHHHHHTCEEEEEEEET-TEEEEEEECSSC-----CTTSCEEEEEECSSTTCT
T ss_pred             cCccCCHHHHHHHHHHHHHHCCCCceEEEEecccC-CceeEEEECCCC-----CCCCcEEEEEccCCCCcH
Confidence            457789999999999999999999 9999999999 999998876543     246899999999999995

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}

Probab=99.51  E-value=2.5e-14  Score=109.32  Aligned_cols=67  Identities=19%  Similarity=0.199  Sum_probs=57.9

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++..++||+++.+||++++ ++| .+++.+||+|+|||+|++++|+++.  ....+||+|+++|++||||.
T Consensus       128 a~~~pytY~~~~~~l~~l~-~~p-~v~~~~iG~S~eGR~I~~l~I~~~~--~~~~~kp~V~i~agiHg~E~  194 (403)
T 3k2k_A          128 AYFEPYSEERHSEFLGAVQ-QMP-QASVVELGRTVEGRPMSLVVLGTPD--EAGAAKKKVWIIARQHPGES  194 (403)
T ss_dssp             ESSCCCCHHHHHHHHHHHT-TST-TEEEEEEEECTTSCEEEEEEECCCC------CCEEEEEEECSSTTCT
T ss_pred             EccCCCCHHHHHHHHHHHh-hCC-CeEEEEeccCCCCCEEEEEEEeCCC--CcCCCCCEEEEEeccCCCCc
Confidence            6788999999999999997 578 7999999999999999999999743  23347899999999999994

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*

Probab=99.48  E-value=6.9e-14  Score=106.32  Aligned_cols=64  Identities=22%  Similarity=0.161  Sum_probs=57.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++..++||+++.+||++++ ++| .+++.+||+|+|||+|++++|+++.     .+||+|+++|++||||.
T Consensus       121 a~~~pyty~~~~~~l~~l~-~~p-~v~~~~iG~S~eGR~i~~l~i~~~~-----~~kp~v~i~agiHg~E~  184 (388)
T 4a37_A          121 AYFEPYSRERHARLVERAL-GIE-GVERLAVGTSVQGRDIELLRVRRHP-----DSHLKLWVIAQQHPGEH  184 (388)
T ss_dssp             ESSCCCCHHHHHHHHHHHT-TST-TEEEEEEEECTTSCEEEEEEECCCT-----TCCEEEEEEECSSTTCT
T ss_pred             EccCCCCHHHHHHHHHHHH-hCC-CcEEEEeeecCCCCeEEEEEEecCC-----CCCcEEEEEcccCCCCc
Confidence            6778899999999999998 577 7999999999999999999999743     36899999999999995

>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}

Probab=99.46  E-value=1.1e-13  Score=105.56  Aligned_cols=64  Identities=17%  Similarity=0.212  Sum_probs=57.4

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++...++|+++.+||+++++ +| .+++.+||+|+|||+|++++|+++.     .+||+|+++|+|||||.
T Consensus       126 ay~~pyty~~~~~~l~~l~~-~~-~v~~~~iG~S~eGR~i~~l~i~~~~-----~~kp~V~i~agiHg~E~  189 (395)
T 3l2n_A          126 AYFTPYSYERHLDLISAVQL-HP-LVSTEHLGLTLDGRDMTLVKVGDDD-----PSKKSIWITARQHPGET  189 (395)
T ss_dssp             ESSCCCCHHHHHHHHHHGGG-ST-TEEEEEEEECTTSCEEEEEEESCCC-----TTSEEEEEEECSSTTCT
T ss_pred             EecCCCCHHHHHHHHHHHhc-CC-ceEEEEEEEcCCCCEEEEEEEecCC-----CCCcEEEEEcccCCCCc
Confidence            56778999999999999975 77 7999999999999999999999753     36899999999999995

>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}

Probab=98.99  E-value=9.8e-11  Score=83.32  Aligned_cols=45  Identities=24%  Similarity=0.215  Sum_probs=39.1

Q ss_pred             HhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          51 QQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        51 ~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++++.+++..+||+|++||||+++++++.       +||+|+|+||+||||+
T Consensus        15 ~r~~~~~~~~~~G~S~~g~pl~~~~~~~~-------~~~~~l~~~g~Hg~E~   59 (243)
T 4axv_A           15 ERAAFLITPTSYGKSVLGAPLLYFPAQVE-------SNSRGLILAGTHGDET   59 (243)
T ss_dssp             GTTSCSSCCEEEEECTTSCEEEEBCCCSC-------CTTCCEEEECSSTTCC
T ss_pred             hhcCCccCeeeeeecCCCCcEEEEECCCC-------CCCEEEEECCcCCCCH
Confidence            35677899999999999999999887653       4689999999999995

>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*

Probab=98.58  E-value=1.1e-07  Score=69.13  Aligned_cols=61  Identities=15%  Similarity=0.162  Sum_probs=46.6

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      -.|+++.+..++|.+.+++..  ++...+|.+ +||||++++.++.     ..+||+|+++||+||||.
T Consensus        20 ~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~-~~~pl~~i~~~~~-----~~~~p~v~i~~giHg~E~   80 (275)
T 3b2y_A           20 CQSNDIDAFYAQLAEEVNRLG--LKKNTLGSV-DSFAINLYQSASQ-----RSDLPSLLISSGFHGEEA   80 (275)
T ss_dssp             EETTCHHHHHHHHHHHHHHHT--CEEEEEEEE-TTEEEEEEECSSC-----CTTSCEEEEEECSSTTCT
T ss_pred             cchHHHHHHHHHHHHhccccc--eEEEEeecc-CCeeEEEEECCCC-----CCCCCEEEEEeccCCCcH
Confidence            456777888777777776654  577788888 6999998765431     246899999999999995

>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A

Probab=97.37  E-value=2.1e-05  Score=58.80  Aligned_cols=59  Identities=19%  Similarity=0.141  Sum_probs=43.7

Q ss_pred             HHHHHHHHH-HH---HhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          40 DELTKFLVA-AA---QQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        40 ~ei~~~l~~-la---~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++|.+||+. |+   .++|. .+....|.+++.+...++++....   ...++|+|+|+||+||||+
T Consensus         5 ~~~~~fl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~---~~~~gp~vlI~aGiHGnE~   67 (350)
T 2bco_A            5 LFRQSFLTDTLDVHIDVAPA-EQVLSNGVQLKLYQRGVLEVIPEN---PTQETKNIIISCGIHGDET   67 (350)
T ss_dssp             CSSSCHHHHHHCSCC-CCCE-EEECTTSCEEEEEETTEEEEECSS---CCTTCCEEEEEECSSTTBC
T ss_pred             chhHhHHHHHhhhccCCCcc-ccccCCceEEEEECCeEEEEeCCc---cCCCCCEEEEEcCCCCCcH
Confidence            356778885 66   57784 455567889998888899998532   1234689999999999996

>1yw6_A Succinylglutamate desuccinylase; alpha-beta protein., structural genomics, PSI, protein structure initiative; 3.10A {Escherichia coli} SCOP: c.56.5.7

Probab=97.34  E-value=0.00016  Score=53.54  Aligned_cols=56  Identities=18%  Similarity=0.240  Sum_probs=38.5

Q ss_pred             HHHHHHHH-HHHHhCCCCeEEEEccc--cCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          40 DELTKFLV-AAAQQNPSKVKLHSIGK--SVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        40 ~ei~~~l~-~la~~~p~~v~~~~iG~--S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++|.+||+ .|+.++|........|.  ++.|+.+..  ++...     ..+|+|+++||+||||+
T Consensus         4 ~~~~~fl~~~l~~~~~~~~~~~~~~~~~~~~g~gv~~--~~p~~-----~~gp~v~i~agiHGnE~   62 (335)
T 1yw6_A            4 DPMDNFLALTLTGKKPVITEREINGVRWRWLGDGVLE--LTPLT-----PPQGALVISAGIHGNET   62 (335)
T ss_dssp             CHHHHHHHHHHHCCCCSBCEEESSSEEEEEEETTEEE--EEESS-----CCSCEEEEEECSSSSCC
T ss_pred             CchhhHHHHHhcCCCcccccccCCCeEEEEecCcEEE--ecCCC-----CCCCEEEEEcCCCCCCH
Confidence            57999999 58888885332223455  666766544  44321     24689999999999995

>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*

Probab=97.02  E-value=0.0011  Score=49.81  Aligned_cols=40  Identities=23%  Similarity=0.248  Sum_probs=31.7

Q ss_pred             eEEEEccccCCCceEEE--EEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          57 VKLHSIGKSVQNRDLWA--LQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        57 v~~~~iG~S~eGR~i~~--l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++...+|++++|+++..  .+++..      .++|+|+++||+||||.
T Consensus         6 ~~~~~~~~~~~G~~~~~~v~~~~g~------~~gp~v~i~agiHG~E~   47 (368)
T 3fmc_A            6 KHEVRVGELAAGQPLSLPVYRFKGK------GAGPSVYIQANVHGAEV   47 (368)
T ss_dssp             EEEEEEEECTTSCEEEEEEEEECCC------SSCCCEEEEECSSTTCT
T ss_pred             EEEEEcccCCCCCeeEEEEEEEeCC------CCCCEEEEECCCCCCCH
Confidence            67889999999998876  444431      24689999999999995

>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}

Probab=95.27  E-value=0.022  Score=41.82  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=22.7

Q ss_pred             ccccCC--CceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          62 IGKSVQ--NRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        62 iG~S~e--GR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++.+..  ...+.+.+++.+       ++|+|+++|++||||.
T Consensus        24 ~~~~~~~~~~~~pv~~~~~~-------~gp~v~i~agiHG~E~   59 (332)
T 2qj8_A           24 VPKGADCEALSLPVFSCNRG-------EGPSLLITGGNHGNEL   59 (332)
T ss_dssp             ECCCSSSCCEEEEEEEEEES-------SSCEEEEEECSSTTCC
T ss_pred             CccCCCCCccceeEEEEeCC-------CCCEEEEECCCCCCCH
Confidence            344432  345566666642       2489999999999995

>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}

Probab=94.54  E-value=0.037  Score=41.04  Aligned_cols=27  Identities=19%  Similarity=0.316  Sum_probs=19.0

Q ss_pred             ceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          69 RDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        69 R~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ..+.+++++.++       +|+|+++|++||||.
T Consensus        41 ~~~pv~~~~~~~-------gp~v~i~agiHG~E~   67 (354)
T 3cdx_A           41 VEIPITVVKNGS-------GPTVLLTGGVHGDEY   67 (354)
T ss_dssp             EEEEEEEEEESS-------CCEEEEEECSSTTCC
T ss_pred             eccCEEEEeCCC-------CCEEEEECCCCCCCH
Confidence            344555555422       379999999999995

>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}

Probab=93.84  E-value=0.067  Score=39.37  Aligned_cols=15  Identities=27%  Similarity=0.235  Sum_probs=13.6

Q ss_pred             CceEEEEccccCCCC
Q psy7680          88 KPMFKYVANIHGDEV  102 (102)
Q Consensus        88 kp~v~i~ggiHg~E~  102 (102)
                      .|+|+++|++||||+
T Consensus        49 gp~v~i~agiHG~E~   63 (331)
T 3na6_A           49 GKTALLTGANHGDEY   63 (331)
T ss_dssp             CCEEEEECCSSTTCC
T ss_pred             CCEEEEECCCCCCCH
Confidence            479999999999995

>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7

Probab=92.93  E-value=0.081  Score=39.09  Aligned_cols=16  Identities=19%  Similarity=0.262  Sum_probs=14.2

Q ss_pred             CCceEEEEccccCCCC
Q psy7680          87 LKPMFKYVANIHGDEV  102 (102)
Q Consensus        87 ~kp~v~i~ggiHg~E~  102 (102)
                      ..|+|+|+||+||||+
T Consensus        45 ~gp~v~i~agiHGnE~   60 (341)
T 1yw4_A           45 GADSVLLSCGVHGNET   60 (341)
T ss_dssp             TSCEEEEEECSSTTCC
T ss_pred             CCCEEEEECCCCCCch
Confidence            3589999999999995

>3nh4_A Aspartoacylase-2; mercapturates, hydrolase; 2.00A {Mus musculus} SCOP: c.56.5.0 PDB: 3nh5_A 3nfz_A 3nh8_A*

Probab=90.95  E-value=0.099  Score=38.71  Aligned_cols=16  Identities=19%  Similarity=0.221  Sum_probs=13.9

Q ss_pred             CCceEEEEccccCCCC
Q psy7680          87 LKPMFKYVANIHGDEV  102 (102)
Q Consensus        87 ~kp~v~i~ggiHg~E~  102 (102)
                      ..|+|+++||+||||+
T Consensus        19 ~gp~v~i~agiHGnE~   34 (327)
T 3nh4_A           19 PLLRVAVTGGTHGNEM   34 (327)
T ss_dssp             CCCSEEEEECSSTTCH
T ss_pred             CCCEEEEEecccCCch
Confidence            3579999999999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d1obra_	323	c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyce	2e-16
d1m4la_	307	c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus)	1e-15
d2c1ca1	312	c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earwor	2e-15
d1uwya2	296	c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic d	4e-15
d1jqga1	317	c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton boll	5e-15
d1h8la2	301	c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic d	6e-15
d2bo9a1	305	c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo	3e-14
d1z5ra1	304	c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus sc	3e-14
d1ayea1	307	c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo	4e-14

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 323

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

 Score = 70.7 bits (172), Expect = 2e-16
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y +++E+   +   A   P+ VK  SIGKS + R+LWA++IS NV +  N  +P   Y 
Sbjct: 8   GYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYT 65

Query: 95  ANIHGDEV 102
           A  H  E 
Sbjct: 66  ALHHAREH 73

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 67.9 bits (165), Expect = 1e-15
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y + DE+  F+     ++P  V    IG+S + R ++ L+ S   ++     +P     
Sbjct: 11  TYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-----RPAIWID 65

Query: 95  ANIHGDEV 102
             IH  E 
Sbjct: 66  LGIHSREW 73

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]} Length = 312

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

 Score = 67.9 bits (165), Expect = 2e-15
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
           +Y   + + ++L    ++ P    + +  +S + R +  ++IS       N  KP+    
Sbjct: 5   NYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDEN--KPVIFID 62

Query: 95  ANIHGDE 101
             IH  E
Sbjct: 63  GGIHARE 69

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 296

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 4e-15
 Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           Y   + +  FL   AQ   S   LHSIGKSV+ R+LW L + R       +  P FKYVA
Sbjct: 5   YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRF-PKEHRIGIPEFKYVA 63

Query: 96  NIHGDE 101
           N+HGDE
Sbjct: 64  NMHGDE 69

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]} Length = 317

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

 Score = 66.4 bits (161), Expect = 5e-15
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
              S++E+  +L   A++ P+ V +   GKS + R +  L+IS       +  KP+    
Sbjct: 11  KIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDAS--KPVVMMQ 68

Query: 95  ANIHGDEV 102
           + +H  E 
Sbjct: 69  SLLHCREW 76

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Length = 301

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

 Score = 66.1 bits (160), Expect = 6e-15
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)

Query: 36  YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
           +  F ++  FL   A + PS  +L+S+GKSV+ R+L+ ++IS N        +P FKY+ 
Sbjct: 10  HHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDN-PGIHEAGEPEFKYIG 68

Query: 96  NIHGDEV 102
           N+HG+EV
Sbjct: 69  NMHGNEV 75

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 3e-14
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y S + +   +   A   P   +   IG S +NR ++ L+ S    +G+ + +P     
Sbjct: 8   AYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS----TGKGVRRPAVWLN 63

Query: 95  ANIHGDEV 102
           A IH  E 
Sbjct: 64  AGIHSREW 71

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]} Length = 304

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 64.1 bits (155), Expect = 3e-14
 Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y +++ +  +      +NP  +   +IG +    +++ L++ +   +     KP     
Sbjct: 6   KYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPN-----KPAIFMD 60

Query: 95  ANIHGDEV 102
              H  E 
Sbjct: 61  CGFHAREW 68

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 4e-14
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 35  HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
            Y + +E+++ +     ++P  V   +IG S +NR +  L+ S          KP     
Sbjct: 10  AYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------KPAIWLD 63

Query: 95  ANIHGDEV 102
           A IH  E 
Sbjct: 64  AGIHAREW 71

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d1jqga1	317	Carboxypeptidase A {Cotton bollworm (Helicoverpa a	99.82
d1uwya2	296	Carboxypeptidase M, catalytic domain {Human (Homo	99.82
d2bo9a1	305	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	99.81
d1h8la2	301	Carboxypeptidase D, catalytic domain {Crested duck	99.81
d2c1ca1	312	Carboxypeptidase B {Corn earworm (Helicoverpa zea)	99.8
d1m4la_	307	Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]	99.8
d1obra_	323	Carboxypeptidase T {Thermoactinomyces vulgaris [Ta	99.8
d1z5ra1	304	Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]	99.79
d1ayea1	307	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	99.79
d1yw6a1	322	Succinylglutamate desuccinylase AstE {Escherichia	96.49
d2g9da1	340	Succinylglutamate desuccinylase AstE {Vibrio chole	92.24
d2bcoa1	339	Succinylglutamate desuccinylase AstE {Vibrio parah	92.07
d1yw4a1	331	Succinylglutamate desuccinylase AstE {Chromobacter	91.82

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

Probab=99.82  E-value=3.6e-20  Score=135.85  Aligned_cols=69  Identities=25%  Similarity=0.294  Sum_probs=64.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|++||||+||.+||++|+++||+++++.+||+|+|||+|++++|++..  ..+..||+|+|+|++||||.
T Consensus         8 ~f~~Y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~--~~~~~kp~v~i~~g~Hg~E~   76 (317)
T d1jqga1           8 SFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTN--FQDASKPVVMMQSLLHCREW   76 (317)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECTTT--TCCTTSCEEEEEECSSTTCT
T ss_pred             CCcCCCCHHHHHHHHHHHHHHCCCceEEEeccCCCCCCeEEEEEEecCC--CCCCCCcEEEEccccCcccc
Confidence            7899999999999999999999999999999999999999999999754  34568999999999999995

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.7e-20  Score=135.22  Aligned_cols=67  Identities=45%  Similarity=0.704  Sum_probs=62.9

Q ss_pred             CCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        35 ~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +||||+||.++|++|+++||+++++.+||+|+|||+|++++||++++ .....||+|+|+||+||||.
T Consensus         4 ~Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~-~~~~~kp~v~~~~giHa~E~   70 (296)
T d1uwya2           4 NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPK-EHRIGIPEFKYVANMHGDET   70 (296)
T ss_dssp             SCCCHHHHHHHHHHHHHHTTTSEEEEEEEECTTSCEEEEEEESSSTT-SCBTTBCEEEEEECCSTTCC
T ss_pred             CcCCHHHHHHHHHHHHHHCCCceEEEEeEECCCCCeEEEEEEeCCCC-CccCCCceEEEEeccCCCCc
Confidence            59999999999999999999999999999999999999999998765 55668999999999999995

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.7e-20  Score=133.59  Aligned_cols=70  Identities=24%  Similarity=0.350  Sum_probs=64.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          28 EPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        28 ~~~~~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ++| +|++||||+||.++|++|+++||+++++.+||+|+|||||++++||+++.    ..||+|+++|++||||.
T Consensus         2 ~~f-~~~~y~ty~ei~~~l~~la~~~p~~~~~~~iG~S~eGr~i~~l~is~~~~----~~kp~v~i~~~~Hg~E~   71 (305)
T d2bo9a1           2 NNF-NYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKG----VRRPAVWLNAGIHSREW   71 (305)
T ss_dssp             SSC-CTTSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECSSTT----SCCCEEEEEECSSTTCH
T ss_pred             CCC-CCCCCCCHHHHHHHHHHHHHHCCCceEEEEeeEcCCCCeEEEEEEeCCCC----CCCCEEEEEeeccCCcc
Confidence            356 89999999999999999999999999999999999999999999998653    56899999999999993

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

Probab=99.81  E-value=7.5e-20  Score=132.73  Aligned_cols=68  Identities=38%  Similarity=0.593  Sum_probs=63.3

Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        34 ~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+||+|+||.+||++|+++||+++++.+||+|++||+|++++|+++++ .....||.|+++|++||||.
T Consensus         8 f~Y~ty~e~~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~~-~~~~~kp~v~i~~~~H~~E~   75 (301)
T d1h8la2           8 FRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPG-IHEAGEPEFKYIGNMHGNEV   75 (301)
T ss_dssp             CSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEESSSTT-CCCTTCCEEEEECCSSTTCC
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCcEEEEEccCCCCCCeEEEEEEeCCCC-CCcCCCCEEEEeCCCCCCch
Confidence            479999999999999999999999999999999999999999998765 55668999999999999995

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

Probab=99.80  E-value=9.8e-20  Score=133.23  Aligned_cols=69  Identities=17%  Similarity=0.242  Sum_probs=64.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|++||+|+||.+||++|+++||+++++.+||+|+|||+|++++|+++.  ..+..||+|+++|++||||.
T Consensus         2 ~~~~Y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGr~i~~~~i~~~~--~~~~~kp~v~i~~~~H~~E~   70 (312)
T d2c1ca1           2 PYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTN--FEDENKPVIFIDGGIHAREW   70 (312)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTT--TCCTTSCEEEEEECSSTTCT
T ss_pred             CccccCCHHHHHHHHHHHHHHCCCceEEEeeeECCCCCeEEEEEEeCCC--CCCCCCcEEEEecccCCCCc
Confidence            5799999999999999999999999999999999999999999999754  34568999999999999995

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.80  E-value=1.1e-19  Score=132.54  Aligned_cols=69  Identities=25%  Similarity=0.393  Sum_probs=63.7

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          28 EPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        28 ~~~~~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      ..| +|++||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++     ..||+|+++|++||||.
T Consensus         5 ~~~-~~~~Y~ty~ei~~~l~~l~~~~p~~v~~~~iG~S~egr~i~~~~is~~~-----~~kp~v~~~~~~Hg~E~   73 (307)
T d1m4la_           5 NTF-NYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGG-----SNRPAIWIDLGIHSREW   73 (307)
T ss_dssp             TTS-CTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSSC-----SSCCEEEEEECSSTTCH
T ss_pred             CCC-CCCCcCCHHHHHHHHHHHHHHCCCceEEEEccCCCCCCeEEEEEEeCCC-----CCCcEEEEeccccCCcc
Confidence            345 8899999999999999999999999999999999999999999999864     35899999999999994

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

Probab=99.80  E-value=9.2e-20  Score=133.53  Aligned_cols=69  Identities=35%  Similarity=0.524  Sum_probs=63.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .++.||+|+||.++|++|+++||+++++.+||+|++||+|++++|+++++  ....||.|++.|++||||.
T Consensus         5 ~~~~Y~~y~e~~~~l~~l~~~~p~~~~~~~iG~S~~gr~i~~l~is~~~~--~~~~kp~v~i~~~~H~~E~   73 (323)
T d1obra_           5 YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVG--TDENEPEVLYTALHHAREH   73 (323)
T ss_dssp             GGTTSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESTTTT--SCCSSCEEEEEECSSTTCT
T ss_pred             ccCCcCCHHHHHHHHHHHHHHCCCceEEEEeeEcCCCCeEEEEEEeCCCC--CCCCCcEEEEecCCCCCcc
Confidence            46789999999999999999999999999999999999999999998653  4568999999999999995

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.79  E-value=1.8e-19  Score=131.32  Aligned_cols=66  Identities=15%  Similarity=0.320  Sum_probs=61.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        32 ~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      +|++||||+||.+||++|+++||+++++.++|+|+|||+|++++|+++.     ..||+|+++|++||||.
T Consensus         3 ~~~~Y~ty~ei~~~l~~l~~~~p~~v~~~~iG~S~egr~i~~~~i~~~~-----~~kp~v~i~~~~Hg~E~   68 (304)
T d1z5ra1           3 SYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPG-----PNKPAIFMDCGFHAREW   68 (304)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESCCC-----SSCCEEEEECCSSTTCH
T ss_pred             CcCcCCCHHHHHHHHHHHHHHCCCceEEEEeeECCCCCeEEEEEEcCCC-----CCCcEEEEeccCCCCCc
Confidence            6799999999999999999999999999999999999999999999753     36899999999999993

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.5e-19  Score=130.65  Aligned_cols=66  Identities=26%  Similarity=0.327  Sum_probs=62.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhCCCCeEEEEccccCCCceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          31 LENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        31 ~~~~~y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      .+|++||||+||.++|++|+++||+++++.+||+|+|||+|++++|++++      .||+|+++|++||||.
T Consensus         6 ~~~~~Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~------~kp~v~~~~~~H~~E~   71 (307)
T d1ayea1           6 FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG------DKPAIWLDAGIHAREW   71 (307)
T ss_dssp             CCSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSSS------SCCEEEEEECSSTTCH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCceEEEEeeECCCCCeEEEEEEeCCC------CCcEEEEEecccCCCc
Confidence            38999999999999999999999999999999999999999999999754      4899999999999993

>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Escherichia coli [TaxId: 562]

Probab=96.49  E-value=0.0013  Score=46.35  Aligned_cols=54  Identities=19%  Similarity=0.271  Sum_probs=34.9

Q ss_pred             HHHHHHH-HHHhCCCCeEEEEccccCC--CceEEEEEEecCCCCCCCCCCceEEEEccccCCCC
Q psy7680          42 LTKFLVA-AAQQNPSKVKLHSIGKSVQ--NRDLWALQISRNVASGRNLLKPMFKYVANIHGDEV  102 (102)
Q Consensus        42 i~~~l~~-la~~~p~~v~~~~iG~S~e--GR~i~~l~is~~~~~~~~~~kp~v~i~ggiHg~E~  102 (102)
                      |.+||.. |+.+-|...+...-|-|+.  |+-+  +.+....     +..+.|++.||+||||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~-----~~~~~v~i~aGiHGNE~   57 (322)
T d1yw6a1           1 MDNFLALTLTGKKPVITEREINGVRWRWLGDGV--LELTPLT-----PPQGALVISAGIHGNET   57 (322)
T ss_dssp             HHHHHHHHHHCCCCSBCEEESSSEEEEEEETTE--EEEEESS-----CCSCEEEEEECSSSSCC
T ss_pred             CccHHHHHhCCCCCcccccccCCeEEEEecCce--EEEeCCC-----CCCCeEEEEccccCCcH
Confidence            4566664 4445566666666676665  5555  4454321     34578999999999995

>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio cholerae [TaxId: 666]

Probab=92.24  E-value=0.064  Score=38.03  Aligned_cols=17  Identities=29%  Similarity=0.372  Sum_probs=14.5

Q ss_pred             CCCceEEEEccccCCCC
Q psy7680          86 LLKPMFKYVANIHGDEV  102 (102)
Q Consensus        86 ~~kp~v~i~ggiHg~E~  102 (102)
                      ...|.|+++||+||||+
T Consensus        49 ~~~~~l~isagvHGnE~   65 (340)
T d2g9da1          49 AATKNMVISCGIHGDET   65 (340)
T ss_dssp             SSCCEEEEEECSSSSCC
T ss_pred             CCCCeEEEEccccCCcH
Confidence            34578999999999996

>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE {Vibrio parahaemolyticus [TaxId: 670]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio parahaemolyticus [TaxId: 670]

Probab=92.07  E-value=0.067  Score=37.92  Aligned_cols=16  Identities=31%  Similarity=0.366  Sum_probs=14.1

Q ss_pred             CCceEEEEccccCCCC
Q psy7680          87 LKPMFKYVANIHGDEV  102 (102)
Q Consensus        87 ~kp~v~i~ggiHg~E~  102 (102)
                      ..|.|+++||+||||+
T Consensus        49 ~~~~v~isagvHGnE~   64 (339)
T d2bcoa1          49 ETKNIIISCGIHGDET   64 (339)
T ss_dssp             TCCEEEEEECSSTTBC
T ss_pred             CCCeEEEEccccCCch
Confidence            4579999999999996

>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Chromobacterium violaceum [TaxId: 536]

Probab=91.82  E-value=0.044  Score=38.75  Aligned_cols=17  Identities=18%  Similarity=0.204  Sum_probs=14.4

Q ss_pred             CCCceEEEEccccCCCC
Q psy7680          86 LLKPMFKYVANIHGDEV  102 (102)
Q Consensus        86 ~~kp~v~i~ggiHg~E~  102 (102)
                      ++.+.|++.||+||||+
T Consensus        43 ~~~~~v~lsagvHGNE~   59 (331)
T d1yw4a1          43 RGADSVLLSCGVHGNET   59 (331)
T ss_dssp             TTSCEEEEEECSSTTCC
T ss_pred             CCCceEEEECcccCChH
Confidence            34568999999999996